Pregenerated sensors for TMEM30B (Homo sapiens)
Ensembl gene IDs: ENSG00000182107Ensembl transcript IDs: ENST00000555868.2, ENST00000557163.1
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCGAAAGCCCTGGACTCAAGATTCAGGAGTCACTTGCAGCTGCCTaGTCTTTGTTACTTCACATTGCTAGGTCTCTCAATCTCTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: GESPGLKIQESLAAA*SLLLHIARSLNLFL Trigger: GAGGAAGAGATTGAGAGACCTAGCAATGTGAAGTAACAAAGATCAGGCAGCTGCAAGTGACTCCTGAATCTTGAGTCCAGGGCTTTCGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR CCA 90 bp | GGCCCAACCTGGTTCAGGGTCGTGATTCCCAAATTTGAGGGAATATaGGACTCTCCAGTGGAGTTTGTTAAAACACAGCTTCGAGGATCT | + |
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Preference number: 1 (lower is better) Translates to: GPTWFRVVIPKFEGI*DSPVEFVKTQLRGS Trigger: AGATCCTCGAAGCTGTGTTTTAACAAACTCCACTGGAGAGTCCCATATTCCCTCAAATTTGGGAATCACGACCCTGAACCAGGTTGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR TCA 90 bp | TTACTGGGCAACAAGGGAATTCAGGCCAACAAGAACCTGGAAGCCTaGGACACCAGACAAAATGTTACAGCACAGGGATCATTGCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: LLGNKGIQANKNLEA*DTRQNVTAQGSLQE Trigger: TTCCTGCAATGATCCCTGTGCTGTAACATTTTGTCTGGTGTCTCAGGCTTCCAGGTTCTTGTTGGCCTGAATTCCCTTGTTGCCCAGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR CCA 90 bp | GTGAACATTTACTGGGCAACAAGGGAATTCAGGCCAACAAGAACCTaGAAGCCTGAGACACCAGACAAAATGTTACAGCACAGGGATCAT | + |
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Preference number: 1 (lower is better) Translates to: VNIYWATREFRPTRT*KPETPDKMLQHRDH Trigger: ATGATCCCTGTGCTGTAACATTTTGTCTGGTGTCTCAGGCTTCCAGGTTCTTGTTGGCCTGAATTCCCTTGTTGCCCAGTAAATGTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCACGAGGTTGGAATTGGGTaGCGGGCGAGGAGGAGATGC | + |
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Preference number: 2 (lower is better) Translates to: ENHCTVVAKALDSRFRSHEVGIG*RARRRC Trigger: GCATCTCCTCCTCGCCCGTCACCCAATTCCAACCTC...GTGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR-3UTR GCA 90 bp | CGACCAAAGAAAAGAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGCGGGCGAGGAGGAGATaGCAAAAGCACCTTGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: RPKKRKPLYCSGESPGLKRARRR*QKHLAR Trigger: TCTTGCAAGGTGCTTTTGGCATCTCCTCCTCGCCCG...CTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTCTTTTCTTTGGTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR-3UTR GCA 90 bp | AACATTTACTGGGCAACAAGGGAATTCAGGCCAACAAGAACCTGGAAGCCTGAGAAGGATGTTTCACTCTaGAGTCAACATCCCTCCCCG | + |
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Preference number: 2 (lower is better) Translates to: NIYWATREFRPTRTWKPEKDVSL*SQHPSP Trigger: CGGGGAGGGATGTTGACTGCAGAGTGAAACATCCTT...CTCAGGCTTCCAGGTTCTTGTTGGCCTGAATTCCCTTGTTGCCCAGTAAATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR CAA 90 bp | TGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCACTaGCAGCTGCCTGATCTTTGTTACTTCACATTGCTAGGTCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: CTVVAKALDSRFRSH*QLPDLCYFTLLGLS Trigger: TGAGAGACCTAGCAATGTGAAGTAACAAAGATCAGGCAGCTGCAAGTGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCACTACAGTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR-3UTR TCA 90 bp | AACATTTACTGGGCAACAAGGGAATTCAGGCCAACAAGAACCTGGAAGCCTGAGTTCCACTCTCAGACTTaGAGAACCTCACATGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: NIYWATREFRPTRTWKPEFHSQT*RTSHGN Trigger: GTTGCCATGTGAGGTTCTTCAAGTCTGAGAGTGGAA...CTCAGGCTTCCAGGTTCTTGTTGGCCTGAATTCCCTTGTTGCCCAGTAAATGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR-3UTR CCA 90 bp | AACATTTACTGGGCAACAAGGGAATTCAGGCCAACAAGAACCTGGAAGCCTGAGACCTTGCAAGAGTTTTaGCAAGAAGCAGGAGGGATC | + |
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Preference number: 2 (lower is better) Translates to: NIYWATREFRPTRTWKPETLQEF*QEAGGI Trigger: GATCCCTCCTGCTTCTTGCCAAAACTCTTGCAAGGT...CTCAGGCTTCCAGGTTCTTGTTGGCCTGAATTCCCTTGTTGCCCAGTAAATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR-3UTR GCA 90 bp | AACATTTACTGGGCAACAAGGGAATTCAGGCCAACAAGAACCTGGAAGCCTGAGGGAGTCACTTGCAGCTaGCTGATCTTTGTTACTTCA | + |
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Preference number: 2 (lower is better) Translates to: NIYWATREFRPTRTWKPEGVTCS*LIFVTS Trigger: TGAAGTAACAAAGATCAGGCAGCTGCAAGTGACTCC...CTCAGGCTTCCAGGTTCTTGTTGGCCTGAATTCCCTTGTTGCCCAGTAAATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR-3UTR CCA 90 bp | AACATTTACTGGGCAACAAGGGAATTCAGGCCAACAAGAACCTGGAAGCCTGAGTTGAAGAACCTCACATaGCAACTCAGTGTCGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: NIYWATREFRPTRTWKPELKNLT*QLSVVK Trigger: CTTCACGACACTGAGTTGCCATGTGAGGTTCTTCAA...CTCAGGCTTCCAGGTTCTTGTTGGCCTGAATTCCCTTGTTGCCCAGTAAATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR-3UTR TCA 90 bp | AACATTTACTGGGCAACAAGGGAATTCAGGCCAACAAGAACCTGGAAGCCTGAGTCACTTGCAGCTGCCTaGTCTTTGTTACTTCACATT | + |
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Preference number: 2 (lower is better) Translates to: NIYWATREFRPTRTWKPESLAAA*SLLLHI Trigger: AATGTGAAGTAACAAAGATCAGGCAGCTGCAAGTGA...CTCAGGCTTCCAGGTTCTTGTTGGCCTGAATTCCCTTGTTGCCCAGTAAATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR-3UTR GCA 90 bp | AACATTTACTGGGCAACAAGGGAATTCAGGCCAACAAGAACCTGGAAGCCTGAGGGTGGGCTAGTGAGCTaGTCAAACATTTGTAACAAA | + |
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Preference number: 2 (lower is better) Translates to: NIYWATREFRPTRTWKPEGGLVS*SNICNK Trigger: TTTGTTACAAATGTTTGAGCAGCTCACTAGCCCACC...CTCAGGCTTCCAGGTTCTTGTTGGCCTGAATTCCCTTGTTGCCCAGTAAATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR-3UTR CCA 90 bp | GTTAGGTCAAAGCTCATTTCCAGTCCAATTGTTGAGGTTCACTCTTTTCTATCTAAAGCTAGGCGAGGTTaGAATTGGGTGACGGGCGAG | + |
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Preference number: 2 (lower is better) Translates to: VRSKLISSPIVEVHSFLSKARRG*NWVTGE Trigger: CTCGCCCGTCACCCAATTCCAACCTCGCCTAGCTTT...AGATAGAAAAGAGTGAACCTCAACAATTGGACTGGAAATGAGCTTTGACCTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR CAA 90 bp | AGATTCAGGAGTCACTTGCAGCTGCCTGATCTTTGTTACTTCACATaGCTAGGTCTCTCAATCTCTTCCTCTAATAGGGGTTTAATAGGA | + |
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Preference number: 2 (lower is better) Translates to: RFRSHLQLPDLCYFT*LGLSISSSNRGLIG Trigger: TCCTATTAAACCCCTATTAGAGGAAGAGATTGAGAGACCTAGCAATGTGAAGTAACAAAGATCAGGCAGCTGCAAGTGACTCCTGAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR-3UTR GCA 90 bp | GTTAGGTCAAAGCTCATTTCCAGTCCAATTGTTGAGGTTCACTCTTTTCTATCTATGCCAAAAGCACCTTaGAAGAGTTTTGGCAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: VRSKLISSPIVEVHSFLSMPKAP*KSFGKK Trigger: CTTCTTGCCAAAACTCTTGCAAGGTGCTTTTGGCAT...AGATAGAAAAGAGTGAACCTCAACAATTGGACTGGAAATGAGCTTTGACCTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR-3UTR GCA 90 bp | ATTGTTGAGGTTCACTCTTTTCTATCTCACTTCCTGAAGATACTTCTAGCTAGTCAGCACAGGGATCATTaGAGGAAAACGTTTCCCATT | + |
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Preference number: 2 (lower is better) Translates to: IVEVHSFLSHFLKILLASQHRDH*RKTFPI Trigger: AATGGGAAACGTTTTCCTGCAATGATCCCTGTGCTG...ACTAGCTAGAAGTATCTTCAGGAAGTGAGATAGAAAAGAGTGAACCTCAACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR GCA 72 bp | TGGGTGACGGGCGAGGAGGAGATGCCAAAAGCACCTTaGAAGAGTTTTGGCAAGAAGCAGGAGGGATCCCTG | + |
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Preference number: 3 (lower is better) Translates to: WVTGEEEMPKAP*KSFGKKQEGSL Trigger: CAGGGATCCCTCCTGCTTCTTGCCAAAACTCTTGCAAGGTGCTTTTGGCATCTCCTCCTCGCCCGTCACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR CCA 72 bp | TACTGGGCAACAAGGGAATTCAGGCCAACAAGAACCTaGAAGCCTGAGACACCAGACAAAATGTTACAGCAC | + |
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Preference number: 3 (lower is better) Translates to: YWATREFRPTRT*KPETPDKMLQH Trigger: GTGCTGTAACATTTTGTCTGGTGTCTCAGGCTTCCAGGTTCTTGTTGGCCTGAATTCCCTTGTTGCCCAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCAGATGCCAAAAGCACCTaGCAAGAGTTTTGGCAAGAA | + |
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Preference number: 3 (lower is better) Translates to: RKPLYCSGESPGLKIQESDAKST*QEFWQE Trigger: TTCTTGCCAAAACTCTTGCAAGGTGCTTTTGGCATC...TGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR TCA 72 bp | ACAGCTTCGAGGATCTCATCCCAGCCTTACTGTGTCTaGATCTCTGTTTGGTGTCTCCTAATCTACCTGCAT | + |
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Preference number: 3 (lower is better) Translates to: TASRISSQPYCV*ISVWCLLIYLH Trigger: ATGCAGGTAGATTAGGAGACACCAAACAGAGATTCAGACACAGTAAGGCTGGGATGAGATCCTCGAAGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR TCA 72 bp | AACAAGGGAATTCAGGCCAACAAGAACCTGGAAGCCTaGGACACCAGACAAAATGTTACAGCACAGGGATCA | + |
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Preference number: 3 (lower is better) Translates to: NKGIQANKNLEA*DTRQNVTAQGS Trigger: TGATCCCTGTGCTGTAACATTTTGTCTGGTGTCTCAGGCTTCCAGGTTCTTGTTGGCCTGAATTCCCTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR TCA 72 bp | CCTGGACTCAAGATTCAGGAGTCACTTGCAGCTGCCTaGTCTTTGTTACTTCACATTGCTAGGTCTCTCAAT | + |
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Preference number: 3 (lower is better) Translates to: PGLKIQESLAAA*SLLLHIARSLN Trigger: ATTGAGAGACCTAGCAATGTGAAGTAACAAAGATCAGGCAGCTGCAAGTGACTCCTGAATCTTGAGTCCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR CCA 72 bp | TGGTTCAGGGTCGTGATTCCCAAATTTGAGGGAATATaGGACTCTCCAGTGGAGTTTGTTAAAACACAGCTT | + |
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Preference number: 3 (lower is better) Translates to: WFRVVIPKFEGI*DSPVEFVKTQL Trigger: AAGCTGTGTTTTAACAAACTCCACTGGAGAGTCCCATATTCCCTCAAATTTGGGAATCACGACCCTGAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR-3UTR CAA 90 bp | GTTAGGTCAAAGCTCATTTCCAGTCCAATTGTTGAGGTTCACTCTTTTCTATCTCTTCCACTCTCAGACTaGAAGAACCTCACATGGCAA | + |
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Preference number: 3 (lower is better) Translates to: VRSKLISSPIVEVHSFLSLPLSD*KNLTWQ Trigger: TTGCCATGTGAGGTTCTTCAAGTCTGAGAGTGGAAG...AGATAGAAAAGAGTGAACCTCAACAATTGGACTGGAAATGAGCTTTGACCTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR-3UTR CAA 90 bp | GTTAGGTCAAAGCTCATTTCCAGTCCAATTGTTGAGGTTCACTCTTTTCTATCTACTCTCCAGTGGAGTTaGTTAAAACACAGCTTCGAG | + |
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Preference number: 3 (lower is better) Translates to: VRSKLISSPIVEVHSFLSTLQWS*LKHSFE Trigger: CTCGAAGCTGTGTTTTAACAAACTCCACTGGAGAGT...AGATAGAAAAGAGTGAACCTCAACAATTGGACTGGAAATGAGCTTTGACCTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR-3UTR CAA 90 bp | ATTGTTGAGGTTCACTCTTTTCTATCTCACTTCCTGAAGATACTTCTAGCTAGTACAGCACAGGGATCATaGCAGGAAAACGTTTCCCAT | + |
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Preference number: 3 (lower is better) Translates to: IVEVHSFLSHFLKILLASTAQGS*QENVSH Trigger: ATGGGAAACGTTTTCCTGCAATGATCCCTGTGCTGT...ACTAGCTAGAAGTATCTTCAGGAAGTGAGATAGAAAAGAGTGAACCTCAACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR-3UTR CAA 90 bp | GTTAGGTCAAAGCTCATTTCCAGTCCAATTGTTGAGGTTCACTCTTTTCTATCTCTTTGTTACTTCACATaGCTAGGTCTCTCAATCTCT | + |
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Preference number: 3 (lower is better) Translates to: VRSKLISSPIVEVHSFLSLCYFT*LGLSIS Trigger: AGAGATTGAGAGACCTAGCAATGTGAAGTAACAAAG...AGATAGAAAAGAGTGAACCTCAACAATTGGACTGGAAATGAGCTTTGACCTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR-3UTR CAA 90 bp | ATTGTTGAGGTTCACTCTTTTCTATCTCACTTCCTGAAGATACTTCTAGCTAGTAGATCTTGCACTGCCTaGAGTGAGTATAATCAAGTT | + |
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Preference number: 3 (lower is better) Translates to: IVEVHSFLSHFLKILLASRSCTA*SEYNQV Trigger: AACTTGATTATACTCACTCAAGGCAGTGCAAGATCT...ACTAGCTAGAAGTATCTTCAGGAAGTGAGATAGAAAAGAGTGAACCTCAACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR TCA 90 bp | CGACCAAAGAAAAGAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGCCAGGCCCAGGCCGATaGAGGCCAGGCCCGCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: RPKKRKPLYCSGESPGLKPGPGR*RPGPRR Trigger: TCTGCGCGGGCCTGGCCTTCATCGGCCTGGGCCTGG...CTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTCTTTTCTTTGGTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR TCA 90 bp | AGAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCAAGGGGGCGCACTCGTTaGCAGGGTGGCGCAGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: RKPLYCSGESPGLKIQESRGRTR*QGGAAR Trigger: GCGCGCTGCGCCACCCTGTCAACGAGTGCGCCCCCT...TGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR GCA 90 bp | GAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCACCGCAAGCCCGGGGACTaGTCGCGGGTCGGGTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: ENHCTVVAKALDSRFRSHRKPGD*SRVGFP Trigger: GGGAAACCCGACCCGCGAGCAGTCCCCGGGCTTGCG...GTGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR CCA 90 bp | AACATTTACTGGGCAACAAGGGAATTCAGGCCAACAAGAACCTGGAAGCCTGAGGCGGCAGCGCGATGCTaGCCGACAGCAGCGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: NIYWATREFRPTRTWKPEAAARC*PTAAAA Trigger: GGCAGCCGCTGCTGTCGGCCAGCATCGCGCTGCCGC...CTCAGGCTTCCAGGTTCTTGTTGGCCTGAATTCCCTTGTTGCCCAGTAAATGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR GCA 90 bp | AACATTTACTGGGCAACAAGGGAATTCAGGCCAACAAGAACCTGGAAGCCTGAGCGGTCCACCAGGCGATaGCGGAGCGGTCGAGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: NIYWATREFRPTRTWKPERSTRR*RSGRAA Trigger: TGCCGCTCGACCGCTCCGGCATCGCCTGGTGGACCG...CTCAGGCTTCCAGGTTCTTGTTGGCCTGAATTCCCTTGTTGCCCAGTAAATGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR TCA 90 bp | GAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCACGGAGGCGCTGCTGAGTaGAGGCGGTGTTGTCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: ENHCTVVAKALDSRFRSHGGAAE*RRCCRA Trigger: AGCCCGACAACACCGCCTTCACTCAGCAGCGCCTCC...GTGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR TCA 90 bp | CGACCAAAGAAAAGAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGTGTTGGGGTCGGGGCTaGGCTCGTAGACTGGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: RPKKRKPLYCSGESPGLKCWGRG*ARRLAG Trigger: GCCGGCCAGTCTACGAGCTCAGCCCCGACCCCAACA...CTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTCTTTTCTTTGGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR GCA 90 bp | AGAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCAAGAGCGGCAGCGCGATaGTGGCCGACAGCAGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: RKPLYCSGESPGLKIQESRAAAR*WPTAAA Trigger: AGCCGCTGCTGTCGGCCAGCATCGCGCTGCCGCTCT...TGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR CCA 90 bp | GAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCACTCCCGCCAGCTCAGGTaGGTTTTTGCCCGGGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: ENHCTVVAKALDSRFRSHSRQLR*VFARAP Trigger: AGGGGCCCGGGCAAAAACCCACCTGAGCTGGCGGGA...GTGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR CCA 90 bp | AGTCACTTGCAGCTGCCTGATCTTTGTTACTTCACATTGCTAGGTCTCTCAATCTGGCGCTCCAGGTCATaGCGGCCGCGCGGGGACCGA | + |
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Preference number: 4 (lower is better) Translates to: SHLQLPDLCYFTLLGLSIWRSRS*RPRGDR Trigger: TCGGTCCCCGCGCGGCCGCCATGACCTGGAGCGCCA...GATTGAGAGACCTAGCAATGTGAAGTAACAAAGATCAGGCAGCTGCAAGTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR CCA 90 bp | AACATTTACTGGGCAACAAGGGAATTCAGGCCAACAAGAACCTGGAAGCCTGAGAGAGGCTGTTGGCGATaGCGCCGCAGGGCGCGATGG | + |
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Preference number: 4 (lower is better) Translates to: NIYWATREFRPTRTWKPERGCWR*RRRARW Trigger: CCATCGCGCCCTGCGGCGCCATCGCCAACAGCCTCT...CTCAGGCTTCCAGGTTCTTGTTGGCCTGAATTCCCTTGTTGCCCAGTAAATGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR CCA 90 bp | AGAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCACCGCCGGGCTGGCGCTaGTGCCAAAGCGAGAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: RKPLYCSGESPGLKIQESPPGWR*CQSEKE Trigger: CTCCTTCTCGCTTTGGCACCAGCGCCAGCCCGGCGG...TGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR GCA 90 bp | AACATTTACTGGGCAACAAGGGAATTCAGGCCAACAAGAACCTGGAAGCCTGAGTGCGCGCGTACAGTTTaGGGAACGTGGGCAGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: NIYWATREFRPTRTWKPECARTV*GTWAAP Trigger: CGGCGCTGCCCACGTTCCGCAAACTGTACGCGCGCA...CTCAGGCTTCCAGGTTCTTGTTGGCCTGAATTCCCTTGTTGCCCAGTAAATGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR TCA 90 bp | AACATTTACTGGGCAACAAGGGAATTCAGGCCAACAAGAACCTGGAAGCCTGAGGCGGGTTGCGGAACTTaGCGTGGTAGTCGGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: NIYWATREFRPTRTWKPEAGCGT*RGSRST Trigger: GGTGGACCGACTACCACGTCAAGTTCCGCAACCCGC...CTCAGGCTTCCAGGTTCTTGTTGGCCTGAATTCCCTTGTTGCCCAGTAAATGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR CCA 90 bp | CGACCAAAGAAAAGAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGAGGTACACTGGGCCCTaGAAGAGCTCGGGCAGCGAG | + |
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Preference number: 4 (lower is better) Translates to: RPKKRKPLYCSGESPGLKRYTGP*KSSGSE Trigger: CTCGCTGCCCGAGCTCTTCCAGGGCCCAGTGTACCT...CTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTCTTTTCTTTGGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR GCA 90 bp | AACATTTACTGGGCAACAAGGGAATTCAGGCCAACAAGAACCTGGAAGCCTGAGAGTTGCCCTGGCGGATaGGCGCGTACAGTTTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: NIYWATREFRPTRTWKPESCPGG*ARTVCG Trigger: TCCGCAAACTGTACGCGCGCATCCGCCAGGGCAACT...CTCAGGCTTCCAGGTTCTTGTTGGCCTGAATTCCCTTGTTGCCCAGTAAATGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR GCA 90 bp | GTTAGGTCAAAGCTCATTTCCAGTCCAATTGTTGAGGTTCACTCTTTTCTATCTGGGAGTCCGCTCAGCTaGGCGTCGTCGCGGGACACG | + |
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Preference number: 4 (lower is better) Translates to: VRSKLISSPIVEVHSFLSGSPLS*ASSRDT Trigger: CGTGTCCCGCGACGACGCGCAGCTGAGCGGACTCCC...AGATAGAAAAGAGTGAACCTCAACAATTGGACTGGAAATGAGCTTTGACCTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR GCA 90 bp | GAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCACCGGGCGAGGAGGAGATaGCAAAAGCACCTTGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ENHCTVVAKALDSRFRSHRARRR*QKHLAR Trigger: TCTTGCAAGGTGCTTTTGGCATCTCCTCCTCGCCCG...GTGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR CCA 90 bp | ATTGTTGAGGTTCACTCTTTTCTATCTCACTTCCTGAAGATACTTCTAGCTAGTGGGGGCGCCGTGCCCTaGAAGGCCAACGCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IVEVHSFLSHFLKILLASGGAVP*KANARL Trigger: CAGCCTGGCGTTGGCCTTCCAGGGCACGGCGCCCCC...ACTAGCTAGAAGTATCTTCAGGAAGTGAGATAGAAAAGAGTGAACCTCAACAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR CCA 90 bp | AGTCACTTGCAGCTGCCTGATCTTTGTTACTTCACATTGCTAGGTCTCTCAATCAAGATGAGGAGCTTGTaGCCGCCGAACGCGCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SHLQLPDLCYFTLLGLSIKMRSL*PPNART Trigger: GGTGCGCGCGTTCGGCGGCCACAAGCTCCTCATCTT...GATTGAGAGACCTAGCAATGTGAAGTAACAAAGATCAGGCAGCTGCAAGTGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR GCA 90 bp | AGTCACTTGCAGCTGCCTGATCTTTGTTACTTCACATTGCTAGGTCTCTCAATCCCGAGCAGTTACCGGTaGCCGGGTCGCCTGTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: SHLQLPDLCYFTLLGLSIPSSYR*PGRLYS Trigger: ACTATACAGGCGACCCGGGCACCGGTAACTGCTCGG...GATTGAGAGACCTAGCAATGTGAAGTAACAAAGATCAGGCAGCTGCAAGTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR CCA 90 bp | AGAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCAAGCAGGAGGGATCCCTaGAAAGCCGGAATCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RKPLYCSGESPGLKIQESSRRDP*KAGITP Trigger: AGGAGTGATTCCGGCTTTCCAGGGATCCCTCCTGCT...TGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR CCA 90 bp | GTTAGGTCAAAGCTCATTTCCAGTCCAATTGTTGAGGTTCACTCTTTTCTATCTCACTCGTTGACAGGGTaGCGCAGCGCGCTGGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VRSKLISSPIVEVHSFLSHSLTG*RSALGS Trigger: ACTCCCCAGCGCGCTGCGCCACCCTGTCAACGAGTG...AGATAGAAAAGAGTGAACCTCAACAATTGGACTGGAAATGAGCTTTGACCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR CCA 90 bp | GTTAGGTCAAAGCTCATTTCCAGTCCAATTGTTGAGGTTCACTCTTTTCTATCTACAGTTTGCGGAACGTaGGCAGCGCCGCCGTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: VRSKLISSPIVEVHSFLSTVCGT*AAPPCA Trigger: TGCGCACGGCGGCGCTGCCCACGTTCCGCAAACTGT...AGATAGAAAAGAGTGAACCTCAACAATTGGACTGGAAATGAGCTTTGACCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR CCA 90 bp | GAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCACAAACCTGGAACATCATaGTTGTCACTGCCCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ENHCTVVAKALDSRFRSHKPGTS*LSLPLG Trigger: TCCCAGGGGCAGTGACAACCATGATGTTCCAGGTTT...GTGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR TCA 90 bp | GAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCACCAGCCTTACTGTGTCTaGATCTCTGTTTGGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ENHCTVVAKALDSRFRSHQPYCV*ISVWCL Trigger: GAGACACCAAACAGAGATTCAGACACAGTAAGGCTG...GTGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR GCA 90 bp | ATTGTTGAGGTTCACTCTTTTCTATCTCACTTCCTGAAGATACTTCTAGCTAGTGCTCAGGTGGGTTTTTaGCCGGGCCCCTCCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IVEVHSFLSHFLKILLASAQVGF*PGPSSA Trigger: GGCAGAGGAGGGGCCCGGGCAAAAACCCACCTGAGC...ACTAGCTAGAAGTATCTTCAGGAAGTGAGATAGAAAAGAGTGAACCTCAACAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR GCA 90 bp | CGACCAAAGAAAAGAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGAAGGATGTTTCACTCTaGAGTCAACATCCCTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RPKKRKPLYCSGESPGLKKDVSL*SQHPSP Trigger: CGGGGAGGGATGTTGACTGCAGAGTGAAACATCCTT...CTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTCTTTTCTTTGGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000555868.2 |
||
| 3UTR CAA 72 bp | GTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCACTaGCAGCTGCCTGATCTTTGTTACTTCACATTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: VAKALDSRFRSH*QLPDLCYFTLL Trigger: TAGCAATGTGAAGTAACAAAGATCAGGCAGCTGCAAGTGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555868.2 |
||
| CDS-3UTR TCA 90 bp | GTTAGGTCAAAGCTCATTTCCAGTCCAATTGTTGAGGTTCACTCTTTTCTATCTGAGGTTGGAATTGGGTaGCGGGCGAGGAGGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: VRSKLISSPIVEVHSFLSEVGIG*RARRRC Trigger: GCATCTCCTCCTCGCCCGTCACCCAATTCCAACCTC...AGATAGAAAAGAGTGAACCTCAACAATTGGACTGGAAATGAGCTTTGACCTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
||
| CDS-3UTR CCA 90 bp | GAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCACTTGAAGAACCTCACATaGCAACTCAGTGTCGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ENHCTVVAKALDSRFRSHLKNLT*QLSVVK Trigger: CTTCACGACACTGAGTTGCCATGTGAGGTTCTTCAA...GTGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR TCA 90 bp | AGAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCAAAGAACCTGGAAGCCTaGGACACCAGACAAAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: RKPLYCSGESPGLKIQESKNLEA*DTRQNV Trigger: AACATTTTGTCTGGTGTCTCAGGCTTCCAGGTTCTT...TGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR GCA 90 bp | CGACCAAAGAAAAGAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGGGAGTCACTTGCAGCTaGCTGATCTTTGTTACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RPKKRKPLYCSGESPGLKGVTCS*LIFVTS Trigger: TGAAGTAACAAAGATCAGGCAGCTGCAAGTGACTCC...CTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTCTTTTCTTTGGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555868.2 |
||
| CDS-3UTR GCA 90 bp | AACATTTACTGGGCAACAAGGGAATTCAGGCCAACAAGAACCTGGAAGCCTGAGGATTCAGGAGTCACTTaGAGCTGCCTGATCTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NIYWATREFRPTRTWKPEDSGVT*SCLIFV Trigger: AACAAAGATCAGGCAGCTGCAAGTGACTCCTGAATC...CTCAGGCTTCCAGGTTCTTGTTGGCCTGAATTCCCTTGTTGCCCAGTAAATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR GCA 90 bp | AACATTTACTGGGCAACAAGGGAATTCAGGCCAACAAGAACCTGGAAGCCTGAGCAGCACAGGGATCATTaGAGGAAAACGTTTCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: NIYWATREFRPTRTWKPEQHRDH*RKTFPI Trigger: AATGGGAAACGTTTTCCTGCAATGATCCCTGTGCTG...CTCAGGCTTCCAGGTTCTTGTTGGCCTGAATTCCCTTGTTGCCCAGTAAATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR CAA 72 bp | CCAAATTTGAGGGAATATGGGACTCTCCAGTGGAGTTaGTTAAAACACAGCTTCGAGGATCTCATCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PNLREYGTLQWS*LKHSFEDLIPA Trigger: GGCTGGGATGAGATCCTCGAAGCTGTGTTTTAACAAACTCCACTGGAGAGTCCCATATTCCCTCAAATTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR GCA 90 bp | CGACCAAAGAAAAGAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATGCCAAAAGCACCTTaGAAGAGTTTTGGCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPKKRKPLYCSGESPGLKMPKAP*KSFGKK Trigger: CTTCTTGCCAAAACTCTTGCAAGGTGCTTTTGGCAT...CTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTCTTTTCTTTGGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000555868.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCAGGTGGGCTAGTGAGCTaGTCAAACATTTGTAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: RKPLYCSGESPGLKIQESGGLVS*SNICNK Trigger: TTTGTTACAAATGTTTGAGCAGCTCACTAGCCCACC...TGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR CCA 90 bp | AGTCACTTGCAGCTGCCTGATCTTTGTTACTTCACATTGCTAGGTCTCTCAATCACCTTGCAAGAGTTTTaGCAAGAAGCAGGAGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SHLQLPDLCYFTLLGLSITLQEF*QEAGGI Trigger: GATCCCTCCTGCTTCTTGCCAAAACTCTTGCAAGGT...GATTGAGAGACCTAGCAATGTGAAGTAACAAAGATCAGGCAGCTGCAAGTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR CCA 90 bp | ATTGTTGAGGTTCACTCTTTTCTATCTCACTTCCTGAAGATACTTCTAGCTAGTGCTTCAGGCCCAACCTaGTTCAGGGTCGTGATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IVEVHSFLSHFLKILLASASGPT*FRVVIP Trigger: GGGAATCACGACCCTGAACCAGGTTGGGCCTGAAGC...ACTAGCTAGAAGTATCTTCAGGAAGTGAGATAGAAAAGAGTGAACCTCAACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR TCA 90 bp | AGAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCATTCCAGTCCAATTGTTaGGGTTCACTCTTTTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: RKPLYCSGESPGLKIQESFQSNC*GSLFSI Trigger: GATAGAAAAGAGTGAACCTCAACAATTGGACTGGAA...TGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| 3UTR CAA 72 bp | AGTCACTTGCAGCTGCCTGATCTTTGTTACTTCACATaGCTAGGTCTCTCAATCTCTTCCTCTAATAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SHLQLPDLCYFT*LGLSISSSNRG Trigger: ACCCCTATTAGAGGAAGAGATTGAGAGACCTAGCAATGTGAAGTAACAAAGATCAGGCAGCTGCAAGTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR TCA 90 bp | ATTGTTGAGGTTCACTCTTTTCTATCTCACTTCCTGAAGATACTTCTAGCTAGTTTCCACTCTCAGACTTaGAGAACCTCACATGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: IVEVHSFLSHFLKILLASFHSQT*RTSHGN Trigger: GTTGCCATGTGAGGTTCTTCAAGTCTGAGAGTGGAA...ACTAGCTAGAAGTATCTTCAGGAAGTGAGATAGAAAAGAGTGAACCTCAACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR CCA 90 bp | GTTAGGTCAAAGCTCATTTCCAGTCCAATTGTTGAGGTTCACTCTTTTCTATCTAAGAAATTAGCAAAGTaGCTGGTGGTGTTTGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VRSKLISSPIVEVHSFLSKKLAK*LVVFVP Trigger: AGGCACAAACACCACCAGCCACTTTGCTAATTTCTT...AGATAGAAAAGAGTGAACCTCAACAATTGGACTGGAAATGAGCTTTGACCTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR CCA 90 bp | GTTAGGTCAAAGCTCATTTCCAGTCCAATTGTTGAGGTTCACTCTTTTCTATCTCTAGTGAACATTTACTaGGCAACAAGGGAATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VRSKLISSPIVEVHSFLSLVNIY*ATREFR Trigger: CCTGAATTCCCTTGTTGCCCAGTAAATGTTCACTAG...AGATAGAAAAGAGTGAACCTCAACAATTGGACTGGAAATGAGCTTTGACCTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR TCA 90 bp | GTTAGGTCAAAGCTCATTTCCAGTCCAATTGTTGAGGTTCACTCTTTTCTATCTGATCTTGCACTGCCTTaGGTGAGTATAATCAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VRSKLISSPIVEVHSFLSDLALP*VSIIKL Trigger: TAACTTGATTATACTCACTCAAGGCAGTGCAAGATC...AGATAGAAAAGAGTGAACCTCAACAATTGGACTGGAAATGAGCTTTGACCTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS GCA 90 bp | GAGCAGTGCCCACACCCTCCCAGTTCCGCCTCCGCCCAGGTGCGCTaGACCCCCGCGGGTCACCGGGAGCCGCACCTCGCCCGCCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EQCPHPPSSASAQVR*TPAGHREPHLARPF Trigger: GAAGGGGCGGGCGAGGTGCGGCTCCCGGTGACCCGCGGGGGTGCAGCGCACCTGGGCGGAGGCGGAACTGGGAGGGTGTGGGCACTGCTC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557163.1 |
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| CDS GCA 90 bp | CCTACGAGCAGTGCCCACACCCTCCCAGTTCCGCCTCCGCCCAGGTaGGCTGCACCCCCGCGGGTCACCGGGAGCCGCACCTCGCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: PTSSAHTLPVPPPPR*AAPPRVTGSRTSPA Trigger: GGCGGGCGAGGTGCGGCTCCCGGTGACCCGCGGGGGTGCAGCGCACCTGGGCGGAGGCGGAACTGGGAGGGTGTGGGCACTGCTCGTAGG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557163.1 |
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| CDS GCA 90 bp | GGGACTGCTCGCGGGTCGGGTTTCCCGCCAGCTCAGGTGGGTTTTTaGCCGGGCCCCTCCTCTGCCTCCGTCACAGGTGAGTTTAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GTARGSGFPPAQVGF*PGPSSASVTGEFSS Trigger: GGAACTAAACTCACCTGTGACGGAGGCAGAGGAGGGGCCCGGGCAAAAACCCACCTGAGCTGGCGGGAAACCCGACCCGCGAGCAGTCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS GCA 90 bp | TCGTACTCCGTCACAGGTGAGTTTAGTTCCAGGCCCTACGAGCAGTaGCCACACCCTCCCAGTTCCGCCTCCGCCCAGGTGCGCTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SYSVTGEFSSRPYEQ*PHPPSSASAQVRCT Trigger: GGTGCAGCGCACCTGGGCGGAGGCGGAACTGGGAGGGTGTGGGCACTGCTCGTAGGGCCTGGAACTAAACTCACCTGTGACGGAGTACGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557163.1 |
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| CDS-3UTR CAA 90 bp | GAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCACATGCGCGCGTACAGTTaGCGGAACGTGGGCAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: ENHCTVVAKALDSRFRSHMRAYS*RNVGSA Trigger: GGCGCTGCCCACGTTCCGCAAACTGTACGCGCGCAT...GTGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR CAA 90 bp | GAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCACCTGAAGATGAGGAGCTaGTGGCCGCCGAACGCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: ENHCTVVAKALDSRFRSHLKMRS*WPPNAR Trigger: GCGCGCGTTCGGCGGCCACAAGCTCCTCATCTTCAG...GTGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR CAA 90 bp | GAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCACCTTCCACTCTCAGACTaGAAGAACCTCACATGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: ENHCTVVAKALDSRFRSHLPLSD*KNLTWQ Trigger: TTGCCATGTGAGGTTCTTCAAGTCTGAGAGTGGAAG...GTGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR CAA 90 bp | GAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCACAGTACCTGGCAAAGTTaGCCTGTTGGCTTTTACACC | + |
|
Preference number: 5 (lower is better) Translates to: ENHCTVVAKALDSRFRSHSTWQS*PVGFYT Trigger: GGTGTAAAAGCCAACAGGCAAACTTTGCCAGGTACT...GTGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR CAA 90 bp | CGACCAAAGAAAAGAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGGATGCCAAAAGCACCTaGCAAGAGTTTTGGCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RPKKRKPLYCSGESPGLKDAKST*QEFWQE Trigger: TTCTTGCCAAAACTCTTGCAAGGTGCTTTTGGCATC...CTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTCTTTTCTTTGGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR CAA 90 bp | AACATTTACTGGGCAACAAGGGAATTCAGGCCAACAAGAACCTGGAAGCCTGAGACTCTCCAGTGGAGTTaGTTAAAACACAGCTTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: NIYWATREFRPTRTWKPETLQWS*LKHSFE Trigger: CTCGAAGCTGTGTTTTAACAAACTCCACTGGAGAGT...CTCAGGCTTCCAGGTTCTTGTTGGCCTGAATTCCCTTGTTGCCCAGTAAATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS-3UTR CAA 90 bp | AGAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCATGTCTGAATCTCTGTTaGGTGTCTCCTAATCTACCT | + |
|
Preference number: 5 (lower is better) Translates to: RKPLYCSGESPGLKIQESCLNLC*VSPNLP Trigger: AGGTAGATTAGGAGACACCAAACAGAGATTCAGACA...TGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
||
| CDS-3UTR CAA 90 bp | AGTCACTTGCAGCTGCCTGATCTTTGTTACTTCACATTGCTAGGTCTCTCAATCACAGCACAGGGATCATaGCAGGAAAACGTTTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SHLQLPDLCYFTLLGLSITAQGS*QENVSH Trigger: ATGGGAAACGTTTTCCTGCAATGATCCCTGTGCTGT...GATTGAGAGACCTAGCAATGTGAAGTAACAAAGATCAGGCAGCTGCAAGTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
||
| CDS-3UTR CAA 90 bp | GAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGATTCAGGAGTCACTTTCCAGTCCAATTGTaGAGGTTCACTCTTTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: ENHCTVVAKALDSRFRSHFPVQL*RFTLFY Trigger: ATAGAAAAGAGTGAACCTCAACAATTGGACTGGAAA...GTGACTCCTGAATCTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555868.2 |
||
| CDS-3UTR CAA 90 bp | CGACCAAAGAAAAGAAAACCACTGTACTGTAGTGGCGAAAGCCCTGGACTCAAGTCATTTCCAGTCCAATaGTTGAGGTTCACTCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RPKKRKPLYCSGESPGLKSFPVQ*LRFTLF Trigger: GAAAAGAGTGAACCTCAACAATTGGACTGGAAATGA...CTTGAGTCCAGGGCTTTCGCCACTACAGTACAGTGGTTTTCTTTTCTTTGGTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000555868.2 |
||
| CDS-3UTR CAA 90 bp | GTTAGGTCAAAGCTCATTTCCAGTCCAATTGTTGAGGTTCACTCTTTTCTATCTAGATTCAGGAGTCACTaGCAGCTGCCTGATCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VRSKLISSPIVEVHSFLSRFRSH*QLPDLC Trigger: ACAAAGATCAGGCAGCTGCAAGTGACTCCTGAATCT...AGATAGAAAAGAGTGAACCTCAACAATTGGACTGGAAATGAGCTTTGACCTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
||
| CDS-3UTR CAA 90 bp | ATTGTTGAGGTTCACTCTTTTCTATCTCACTTCCTGAAGATACTTCTAGCTAGTCTTTGTTACTTCACATaGCTAGGTCTCTCAATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: IVEVHSFLSHFLKILLASLCYFT*LGLSIS Trigger: AGAGATTGAGAGACCTAGCAATGTGAAGTAACAAAG...ACTAGCTAGAAGTATCTTCAGGAAGTGAGATAGAAAAGAGTGAACCTCAACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555868.2 |
||
| CDS GCA 72 bp | CCACACCCTCCCAGTTCCGCCTCCGCCCAGGTGCGCTaGACCCCCGCGGGTCACCGGGAGCCGCACCTCGCC | + |
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Preference number: 6 (lower is better) Translates to: PHPPSSASAQVR*TPAGHREPHLA Trigger: GGCGAGGTGCGGCTCCCGGTGACCCGCGGGGGTGCAGCGCACCTGGGCGGAGGCGGAACTGGGAGGGTGTGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557163.1 |
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| CDS TCA 72 bp | GGCCGGCCGCGCTGCGCTGGTAGGGGGCGCACTCGTTaGCAGGGTGGCGCAGCGCGCTGGGGAGTCCGCTCA | + |
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Preference number: 6 (lower is better) Translates to: GRPRCAGRGRTR*QGGAARWGVRS Trigger: TGAGCGGACTCCCCAGCGCGCTGCGCCACCCTGTCAACGAGTGCGCCCCCTACCAGCGCAGCGCGGCCGGCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000555868.2 ENST00000557163.1 |
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| CDS GCA 72 bp | AGTGCCCACACCCTCCCAGTTCCGCCTCCGCCCAGGTaGGCTGCACCCCCGCGGGTCACCGGGAGCCGCACC | + |
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Preference number: 6 (lower is better) Translates to: SAHTLPVPPPPR*AAPPRVTGSRT Trigger: GGTGCGGCTCCCGGTGACCCGCGGGGGTGCAGCGCACCTGGGCGGAGGCGGAACTGGGAGGGTGTGGGCACT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557163.1 |
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| CDS GCA 72 bp | CGCGGGTCGGGTTTCCCGCCAGCTCAGGTGGGTTTTTaGCCGGGCCCCTCCTCTGCCTCCGTCACAGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: RGSGFPPAQVGF*PGPSSASVTGE Trigger: CTCACCTGTGACGGAGGCAGAGGAGGGGCCCGGGCAAAAACCCACCTGAGCTGGCGGGAAACCCGACCCGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS CCA 72 bp | GGACTGCTCGCGGGTCGGGTTTCCCGCCAGCTCAGGTaGGTTTTTGCCCGGGCCCCTCCTCTGCCTCCGTCA | + |
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Preference number: 6 (lower is better) Translates to: GLLAGRVSRQLR*VFARAPPLPPS Trigger: TGACGGAGGCAGAGGAGGGGCCCGGGCAAAAACCCACCTGAGCTGGCGGGAAACCCGACCCGCGAGCAGTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000555868.2 |
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| CDS GCA 72 bp | GTCACAGGTGAGTTTAGTTCCAGGCCCTACGAGCAGTaGCCACACCCTCCCAGTTCCGCCTCCGCCCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: VTGEFSSRPYEQ*PHPPSSASAQV Trigger: CACCTGGGCGGAGGCGGAACTGGGAGGGTGTGGGCACTGCTCGTAGGGCCTGGAACTAAACTCACCTGTGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557163.1 |
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