RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM30A (Homo sapiens)

Ensembl gene IDs: ENSG00000112697

Ensembl transcript IDs: ENST00000230461.11, ENST00000370050.9, ENST00000475111.6, ENST00000518161.1, ENST00000673730.1, ENST00000673989.1, ENST00000674038.1, ENST00000674104.1, ENST00000674151.1

Found 510 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATTATTTCCATCATGCTTACCTCTCTGTTTACTGGACATTCCCCTTaGTCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGATGAT +
Preference number: 1 (lower is better)
Translates to: IISIMLTSLFTGHSP*SNTKLSQSNCNSDD
Trigger: ATCATCTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAGTAAACAGAGAGGTAAGCATGATGGAAATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR CCA 90 bp ATTTATGAATCCATTATTATCTGGGTCAGAATCCAGCATGTAAACTaGTTTAAGCCAGTTCACAGGCTTTGTTGTACCTTTAAATCGTTC +
Preference number: 1 (lower is better)
Translates to: IYESIIIWVRIQHVN*FKPVHRLCCTFKSF
Trigger: GAACGATTTAAAGGTACAACAAAGCCTGTGAACTGGCTTAAACCAGTTTACATGCTGGATTCTGACCCAGATAATAATGGATTCATAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
3UTR-3UTR CCA 90 bp GAGTTCCTTAGAGATCAAACAGCAGAAAACAGGAGGAACTTAGGCCATCAATGGTCAATCTGGAAAGAGTaGCAGAAACCCCTCTCCCCC +
Preference number: 2 (lower is better)
Translates to: EFLRDQTAENRRNLGHQWSIWKE*QKPLSP
Trigger: GGGGGAGAGGGGTTTCTGCCACTCTTTCCAGATTGA...CCATTGATGGCCTAAGTTCCTCCTGTTTTCTGCTGTTTGATCTCTAAGGAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR GCA 90 bp CAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACCTCTCTGTACCCTATCTCTCAGCTaGTCCTCCTCACTAGTCAGG +
Preference number: 2 (lower is better)
Translates to: QVFPVYPTSLFPSCLPLCTLSLS*SSSLVR
Trigger: CCTGACTAGTGAGGAGGAGCAGCTGAGAGATAGGGT...ACAGAGAGGTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CCA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCGCTCTATGCATCATGTaGCCTGTCCGAATAAAAAGC +
Preference number: 2 (lower is better)
Translates to: LLSRTYPTTADMSINSYAALCIM*PVRIKS
Trigger: GCTTTTTATTCGGACAGGCCACATGATGCATAGAGC...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CCA 90 bp CTGGACATTCCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGTCAATCTGGAAAGAGTaGCAGAAACCCCTCTCCCCC +
Preference number: 2 (lower is better)
Translates to: LDIPLDLIPNLASLTVTQSIWKE*QKPLSP
Trigger: GGGGGAGAGGGGTTTCTGCCACTCTTTCCAGATTGA...CTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CCA 90 bp CATTCAAAGAGTATCGGCCAGCTGGTAATGTTGGATGTAAATCACTTTTCCTTTGTAATCCCAGCAACTTaGGAGGCCGAAGTGGGCGGA +
Preference number: 2 (lower is better)
Translates to: HSKSIGQLVMLDVNHFSFVIPAT*EAEVGG
Trigger: TCCGCCCACTTCGGCCTCCCAAGTTGCTGGGATTAC...AAAGGAAAAGTGATTTACATCCAACATTACCAGCTGGCCGATACTCTTTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674104.1
3UTR-3UTR CCA 90 bp AGGATGGTAGTCCTCCTTAAACAGCACAGACTCAATCTGGAAAGAGTGGCAGAAGCTCTATGCATCATGTaGCCTGTCCGAATAAAAAGC +
Preference number: 2 (lower is better)
Translates to: RMVVLLKQHRLNLERVAEALCIM*PVRIKS
Trigger: GCTTTTTATTCGGACAGGCCACATGATGCATAGAGC...TTCTGCCACTCTTTCCAGATTGAGTCTGTGCTGTTTAAGGAGGACTACCATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp TCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTGACGCTGTGTTAAAAATTCGAAAGCTAGGTTaGATAGGACTGGCCTTGATG +
Preference number: 2 (lower is better)
Translates to: SHPGMKKLKPGLTDAVLKIRKLG*IGLALM
Trigger: CATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAAT...TTTTAACACAGCGTCAGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp CTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCAATTCGAAAGCTAGGTTaGATAGGACTGGCCTTGATG +
Preference number: 2 (lower is better)
Translates to: LTRYQHSKARLNRTGLDAIRKLG*IGLALM
Trigger: CATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAAT...TGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp GAGTTCCTTAGAGATCAAACAGCAGAAAACAGGAGGAACTTAGGCCATCAATGGATTCGAAAGCTAGGTTaGATAGGACTGGCCTTGATG +
Preference number: 2 (lower is better)
Translates to: EFLRDQTAENRRNLGHQWIRKLG*IGLALM
Trigger: CATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAAT...CCATTGATGGCCTAAGTTCCTCCTGTTTTCTGCTGTTTGATCTCTAAGGAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp CCCATGCTTCACAGAGACTATACGAATGTTCCATACTCTTCATATTTAGCAACACTGAACCGCATTCACTaGCCCTATCTCTCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: PMLHRDYTNVPYSSYLATLNRIH*PYLSAA
Trigger: AGCAGCTGAGAGATAGGGTCAGTGAATGCGGTTCAG...TGTTGCTAAATATGAAGAGTATGGAACATTCGTATAGTCTCTGTGAAGCATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR GCA 90 bp CTGGACATTCCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGATGAAAGAGGCTCTATaGATCATGTGGCCTGTCCGA +
Preference number: 2 (lower is better)
Translates to: LDIPLDLIPNLASLTVTQMKEAL*IMWPVR
Trigger: TCGGACAGGCCACATGATGCATAGAGCCTCTTTCAT...CTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR GCA 90 bp CAGTCTCCATTAAGCACTTACATGTGGTTTACAGTTGAGGCAGAAGATGAAGGTATGAAAGAGGCTCTATaGATCATGTGGCCTGTCCGA +
Preference number: 2 (lower is better)
Translates to: QSPLSTYMWFTVEAEDEGMKEAL*IMWPVR
Trigger: TCGGACAGGCCACATGATGCATAGAGCCTCTTTCAT...ACCTTCATCTTCTGCCTCAACTGTAAACCACATGTAAGTGCTTAATGGAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR GCA 90 bp CAGTCTCCATTAAGCACTTACATGTGGTTTACAGTTGAGGCAGAAGATGAAGGTGTTGGGGTTCCTGACTaGAACATTCAACCAAACGGA +
Preference number: 2 (lower is better)
Translates to: QSPLSTYMWFTVEAEDEGVGVPD*NIQPNG
Trigger: TCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAAC...ACCTTCATCTTCTGCCTCAACTGTAAACCACATGTAAGTGCTTAATGGAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR GCA 90 bp AAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGGAAGTTGGGGTTCCTGACTaGAACATTCAACCAAACGGA +
Preference number: 2 (lower is better)
Translates to: KNIPSELGFLTATFNQTEVGVPD*NIQPNG
Trigger: TCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAAC...TTCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CCA 90 bp CAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACCTCTCTGTAGCACAGACTCAATCTaGAAAGAGTGGCAGAAACCC +
Preference number: 2 (lower is better)
Translates to: QVFPVYPTSLFPSCLPLCSTDSI*KEWQKP
Trigger: GGGTTTCTGCCACTCTTTCCAGATTGAGTCTGTGCT...ACAGAGAGGTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp CACATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATATTCGAAAGCTAGGTTaGATAGGACTGGCCTTGATG +
Preference number: 2 (lower is better)
Translates to: HMKEALCIMWPVRIKSKHIRKLG*IGLALM
Trigger: CATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAAT...ATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp CAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACCTCTCTGTATTCGAAAGCTAGGTTaGATAGGACTGGCCTTGATG +
Preference number: 2 (lower is better)
Translates to: QVFPVYPTSLFPSCLPLCIRKLG*IGLALM
Trigger: CATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAAT...ACAGAGAGGTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCTCTTTCTCTGAATCCTaGAAGGTTAGCAAGTCATTA +
Preference number: 2 (lower is better)
Translates to: LLSRTYPTTADMSINSYASFSES*KVSKSL
Trigger: TAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGA...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp CTGGACATTCCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGCACGTTGCCCTCAAATaGCTTTTCCAGTGTGAAGTT +
Preference number: 2 (lower is better)
Translates to: LDIPLDLIPNLASLTVTQHVALK*LFQCEV
Trigger: AACTTCACACTGGAAAAGTCATTTGAGGGCAACGTG...CTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673989.1
3UTR-3UTR GCA 90 bp TATAAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGATGAAAGAGGCTCTATaGATCATGTGGCCTGTCCGA +
Preference number: 2 (lower is better)
Translates to: YKNIPSELGFLTATFNQTMKEAL*IMWPVR
Trigger: TCGGACAGGCCACATGATGCATAGAGCCTCTTTCAT...CGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR GCA 90 bp TATAAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGGTTGGGGTTCCTGACTaGAACATTCAACCAAACGGA +
Preference number: 2 (lower is better)
Translates to: YKNIPSELGFLTATFNQTVGVPD*NIQPNG
Trigger: TCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAAC...CGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR GCA 90 bp TCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACGTTGGGGTTCCTGACTaGAACATTCAACCAAACGGA +
Preference number: 2 (lower is better)
Translates to: SLVRFFLCTPLHYFHHAYVGVPD*NIQPNG
Trigger: TCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAAC...GTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR GCA 90 bp ATGAATTACATTTTATCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTACCCTATCTCTCAGCTaGTCCTCCTCACTAGTCAGG +
Preference number: 2 (lower is better)
Translates to: MNYILSHPGMKKLKPGLTTLSLS*SSSLVR
Trigger: CCTGACTAGTGAGGAGGAGCAGCTGAGAGATAGGGT...AGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGATAAAATGTAATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CCA 90 bp AAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGGAAGCTCTATGCATCATGTaGCCTGTCCGAATAAAAAGC +
Preference number: 2 (lower is better)
Translates to: KNIPSELGFLTATFNQTEALCIM*PVRIKS
Trigger: GCTTTTTATTCGGACAGGCCACATGATGCATAGAGC...TTCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CCA 90 bp CTGGACATTCCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGGCTCTATGCATCATGTaGCCTGTCCGAATAAAAAGC +
Preference number: 2 (lower is better)
Translates to: LDIPLDLIPNLASLTVTQALCIM*PVRIKS
Trigger: GCTTTTTATTCGGACAGGCCACATGATGCATAGAGC...CTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CCA 90 bp GAGTTCCTTAGAGATCAAACAGCAGAAAACAGGAGGAACTTAGGCCATCAATGGATCCAGCATGTAAACTaGTTTAAGCCAGTTCACAGG +
Preference number: 2 (lower is better)
Translates to: EFLRDQTAENRRNLGHQWIQHVN*FKPVHR
Trigger: CCTGTGAACTGGCTTAAACCAGTTTACATGCTGGAT...CCATTGATGGCCTAAGTTCCTCCTGTTTTCTGCTGTTTGATCTCTAAGGAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
3UTR-3UTR CCA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCGAATCCATTATTATCTaGGTCAGAATCCAGCATGTA +
Preference number: 2 (lower is better)
Translates to: LLSRTYPTTADMSINSYAESIII*VRIQHV
Trigger: TACATGCTGGATTCTGACCCAGATAATAATGGATTC...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
3UTR-3UTR TCA 90 bp CTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCAGATAAACTGGATACATaGACCACCTCAACAAAGATG +
Preference number: 2 (lower is better)
Translates to: LTRYQHSKARLNRTGLDADKLDT*TTSTKM
Trigger: CATCTTTGTTGAGGTGGTTCATGTATCCAGTTTATC...TGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp TCCTCCTCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATCAACCACTGCAGACATaGGCATTAATTCTTATGCCA +
Preference number: 2 (lower is better)
Translates to: SSSLVRFFLCTPLHYFHHQPLQT*ALILMP
Trigger: TGGCATAAGAATTAATGCTCATGTCTGCAGTGGTTG...ATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGAGGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp CAGTCTCCATTAAGCACTTACATGTGGTTTACAGTTGAGGCAGAAGATGAAGGTCAACCACTGCAGACATaGGCATTAATTCTTATGCCA +
Preference number: 2 (lower is better)
Translates to: QSPLSTYMWFTVEAEDEGQPLQT*ALILMP
Trigger: TGGCATAAGAATTAATGCTCATGTCTGCAGTGGTTG...ACCTTCATCTTCTGCCTCAACTGTAAACCACATGTAAGTGCTTAATGGAGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp AGGATGGTAGTCCTCCTTAAACAGCACAGACTCAATCTGGAAAGAGTGGCAGAAAGAATAAAAACAGCCTaGGTATTTCCAAAGCTGAAG +
Preference number: 2 (lower is better)
Translates to: RMVVLLKQHRLNLERVAERIKTA*VFPKLK
Trigger: CTTCAGCTTTGGAAATACTCAGGCTGTTTTTATTCT...TTCTGCCACTCTTTCCAGATTGAGTCTGTGCTGTTTAAGGAGGACTACCATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp TCCTCCTCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATACTGGACATTCCCCTTaGTCTAATACCAAACTTAGC +
Preference number: 2 (lower is better)
Translates to: SSSLVRFFLCTPLHYFHHTGHSP*SNTKLS
Trigger: GCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAGT...ATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGAGGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp CATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGCTCCAGGGGGATTTCTaGATTTCACATTTTTATCTG +
Preference number: 2 (lower is better)
Translates to: HSKARLNRTGLDAHADDLLQGDF*ISHFYL
Trigger: CAGATAAAAATGTGAAATTCAGAAATCCCCCTGGAG...CAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
3UTR-3UTR CCA 90 bp TCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTGACGCTGTGTTAAAACTGTACTGGATAAACTaGATACATGAACCACCTCAA +
Preference number: 2 (lower is better)
Translates to: SHPGMKKLKPGLTDAVLKLYWIN*IHEPPQ
Trigger: TTGAGGTGGTTCATGTATCCAGTTTATCCAGTACAG...TTTTAACACAGCGTCAGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CCA 90 bp CCCATGCTTCACAGAGACTATACGAATGTTCCATACTCTTCATATTTAGCAACAAGCACAGACTCAATCTaGAAAGAGTGGCAGAAACCC +
Preference number: 2 (lower is better)
Translates to: PMLHRDYTNVPYSSYLATSTDSI*KEWQKP
Trigger: GGGTTTCTGCCACTCTTTCCAGATTGAGTCTGTGCT...TGTTGCTAAATATGAAGAGTATGGAACATTCGTATAGTCTCTGTGAAGCATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CCA 90 bp AAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGGAAATTTATTACAGGGACTaGAAGGCTCTGTTCCGGTAT +
Preference number: 2 (lower is better)
Translates to: KNIPSELGFLTATFNQTEIYYRD*KALFRY
Trigger: ATACCGGAACAGAGCCTTCCAGTCCCTGTAATAAAT...TTCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673989.1
3UTR-3UTR TCA 90 bp CAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACCTCTCTGTGATAAACTGGATACATaGACCACCTCAACAAAGATG +
Preference number: 2 (lower is better)
Translates to: QVFPVYPTSLFPSCLPLCDKLDT*TTSTKM
Trigger: CATCTTTGTTGAGGTGGTTCATGTATCCAGTTTATC...ACAGAGAGGTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp CATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTACAACCACTGCAGACATaGGCATTAATTCTTATGCCA +
Preference number: 2 (lower is better)
Translates to: HERGSMHHVACPNKKQTLQPLQT*ALILMP
Trigger: TGGCATAAGAATTAATGCTCATGTCTGCAGTGGTTG...TAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp GAGTTCCTTAGAGATCAAACAGCAGAAAACAGGAGGAACTTAGGCCATCAATGGCAAACGATATTCACTTaGCTCTTCTCTTGGTTGAAT +
Preference number: 2 (lower is better)
Translates to: EFLRDQTAENRRNLGHQWQTIFT*LFSWLN
Trigger: ATTCAACCAAGAGAAGAGTCAAGTGAATATCGTTTG...CCATTGATGGCCTAAGTTCCTCCTGTTTTCTGCTGTTTGATCTCTAAGGAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp CAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACCTCTCTGTCTCCAGGGGGATTTCTaGATTTCACATTTTTATCTG +
Preference number: 2 (lower is better)
Translates to: QVFPVYPTSLFPSCLPLCLQGDF*ISHFYL
Trigger: CAGATAAAAATGTGAAATTCAGAAATCCCCCTGGAG...ACAGAGAGGTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
3UTR-3UTR TCA 90 bp CTGGACATTCCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGTTTTCCTCCCATCCATaGAATAGTGCTCAAGATCAT +
Preference number: 2 (lower is better)
Translates to: LDIPLDLIPNLASLTVTQFSSHP*NSAQDH
Trigger: ATGATCTTGAGCACTATTTCATGGATGGGAGGAAAA...CTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
3UTR-3UTR TCA 90 bp GAGTTCCTTAGAGATCAAACAGCAGAAAACAGGAGGAACTTAGGCCATCAATGGGAATCTCCATTTAGTTaGCTATCATCTCGAGATTTC +
Preference number: 2 (lower is better)
Translates to: EFLRDQTAENRRNLGHQWESPFS*LSSRDF
Trigger: GAAATCTCGAGATGATAGTCAACTAAATGGAGATTC...CCATTGATGGCCTAAGTTCCTCCTGTTTTCTGCTGTTTGATCTCTAAGGAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673989.1
3UTR-3UTR GCA 90 bp TCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCATGAAAGAGGCTCTATaGATCATGTGGCCTGTCCGA +
Preference number: 2 (lower is better)
Translates to: SLNPERLASHYTHTSCNPMKEAL*IMWPVR
Trigger: TCGGACAGGCCACATGATGCATAGAGCCTCTTTCAT...GGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR CAA 90 bp CTTCAAAATGACATACTAACCAGATATCAGCATTCGAAAGCTAGGTaGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGCTTTCA +
Preference number: 2 (lower is better)
Translates to: LQNDILTRYQHSKAR*NRTGLDAHADDLLS
Trigger: TGAAAGCAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTATGTCATTTTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp CAGTCTCCATTAAGCACTTACATGTGGTTTACAGTTGAGGCAGAAGATGAAGGTTCTTTCTCTGAATCCTaGAAGGTTAGCAAGTCATTA +
Preference number: 2 (lower is better)
Translates to: QSPLSTYMWFTVEAEDEGSFSES*KVSKSL
Trigger: TAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGA...ACCTTCATCTTCTGCCTCAACTGTAAACCACATGTAAGTGCTTAATGGAGACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp TATAAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGGATAAACTGGATACATaGACCACCTCAACAAAGATG +
Preference number: 2 (lower is better)
Translates to: YKNIPSELGFLTATFNQTDKLDT*TTSTKM
Trigger: CATCTTTGTTGAGGTGGTTCATGTATCCAGTTTATC...CGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp CCCATGCTTCACAGAGACTATACGAATGTTCCATACTCTTCATATTTAGCAACACAACCACTGCAGACATaGGCATTAATTCTTATGCCA +
Preference number: 2 (lower is better)
Translates to: PMLHRDYTNVPYSSYLATQPLQT*ALILMP
Trigger: TGGCATAAGAATTAATGCTCATGTCTGCAGTGGTTG...TGTTGCTAAATATGAAGAGTATGGAACATTCGTATAGTCTCTGTGAAGCATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp AAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGGAAAGAATAAAAACAGCCTaGGTATTTCCAAAGCTGAAG +
Preference number: 2 (lower is better)
Translates to: KNIPSELGFLTATFNQTERIKTA*VFPKLK
Trigger: CTTCAGCTTTGGAAATACTCAGGCTGTTTTTATTCT...TTCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp CCCATGCTTCACAGAGACTATACGAATGTTCCATACTCTTCATATTTAGCAACACAGATGAGAAAGTGCTaGAAGGGCTCTTCAACTTTT +
Preference number: 2 (lower is better)
Translates to: PMLHRDYTNVPYSSYLATQMRKC*KGSSTF
Trigger: AAAAGTTGAAGAGCCCTTTCAGCACTTTCTCATCTG...TGTTGCTAAATATGAAGAGTATGGAACATTCGTATAGTCTCTGTGAAGCATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp TATAAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGTTTTCCTCCCATCCATaGAATAGTGCTCAAGATCAT +
Preference number: 2 (lower is better)
Translates to: YKNIPSELGFLTATFNQTFSSHP*NSAQDH
Trigger: ATGATCTTGAGCACTATTTCATGGATGGGAGGAAAA...CGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
3UTR-3UTR GCA 90 bp GTGCATACACATTGCTATTTGACCTATATGCAAAAGTGGAATGAAATACATAGGATGAAAGAGGCTCTATaGATCATGTGGCCTGTCCGA +
Preference number: 2 (lower is better)
Translates to: VHTHCYLTYMQKWNEIHRMKEAL*IMWPVR
Trigger: TCGGACAGGCCACATGATGCATAGAGCCTCTTTCAT...CCTATGTATTTCATTCCACTTTTGCATATAGGTCAAATAGCAATGTGTATGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR GCA 90 bp AAAACAATTGGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCGTTGGGGTTCCTGACTaGAACATTCAACCAAACGGA +
Preference number: 2 (lower is better)
Translates to: KTIGALTKENVHTHCYLTVGVPD*NIQPNG
Trigger: TCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAAC...GGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACCAATTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR GCA 90 bp ATGAATTACATTTTATCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTTCCCCGAAAATAAACTaGCAAGTGCAAGAGGGACAA +
Preference number: 2 (lower is better)
Translates to: MNYILSHPGMKKLKPGLTSPKIN*QVQEGQ
Trigger: TTGTCCCTCTTGCACTTGGCAGTTTATTTTCGGGGA...AGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGATAAAATGTAATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CCA 90 bp CATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTACTGTACTGGATAAACTaGATACATGAACCACCTCAA +
Preference number: 2 (lower is better)
Translates to: HERGSMHHVACPNKKQTLLYWIN*IHEPPQ
Trigger: TTGAGGTGGTTCATGTATCCAGTTTATCCAGTACAG...TAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CCA 90 bp CTGGACATTCCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGTTAAGCACTTACATGTaGTTTACAGTTGAGGCAGAA +
Preference number: 2 (lower is better)
Translates to: LDIPLDLIPNLASLTVTQLSTYM*FTVEAE
Trigger: TTCTGCCTCAACTGTAAACCACATGTAAGTGCTTAA...CTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CCA 90 bp AAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGGAAGAATCCATTATTATCTaGGTCAGAATCCAGCATGTA +
Preference number: 2 (lower is better)
Translates to: KNIPSELGFLTATFNQTEESIII*VRIQHV
Trigger: TACATGCTGGATTCTGACCCAGATAATAATGGATTC...TTCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
3UTR-3UTR CCA 90 bp AAAACAATTGGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCCCAGAAGGAAGGAGATaGATCCAACAGCGATGTAAG +
Preference number: 2 (lower is better)
Translates to: KTIGALTKENVHTHCYLTPEGRR*IQQRCK
Trigger: CTTACATCGCTGTTGGATCCATCTCCTTCCTTCTGG...GGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACCAATTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
3UTR-3UTR TCA 90 bp TCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACTCTTTCTCTGAATCCTaGAAGGTTAGCAAGTCATTA +
Preference number: 2 (lower is better)
Translates to: SLVRFFLCTPLHYFHHAYSFSES*KVSKSL
Trigger: TAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGA...GTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp GGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCTATATGCAACAACCACTGCAGACATaGGCATTAATTCTTATGCCA +
Preference number: 2 (lower is better)
Translates to: GALTKENVHTHCYLTYMQQPLQT*ALILMP
Trigger: TGGCATAAGAATTAATGCTCATGTCTGCAGTGGTTG...TTGCATATAGGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR GCA 90 bp CAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACCTCTCTGTTCATTATTTCCATCATaGTTACCTCTCTGTTTACTG +
Preference number: 2 (lower is better)
Translates to: QVFPVYPTSLFPSCLPLCSLFPS*LPLCLL
Trigger: CAGTAAACAGAGAGGTAAGCATGATGGAAATAATGA...ACAGAGAGGTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CCA 90 bp GTGCATACACATTGCTATTTGACCTATATGCAAAAGTGGAATGAAATACATAGGGCTCTATGCATCATGTaGCCTGTCCGAATAAAAAGC +
Preference number: 2 (lower is better)
Translates to: VHTHCYLTYMQKWNEIHRALCIM*PVRIKS
Trigger: GCTTTTTATTCGGACAGGCCACATGATGCATAGAGC...CCTATGTATTTCATTCCACTTTTGCATATAGGTCAAATAGCAATGTGTATGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp ATGAATTACATTTTATCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTGATAAACTGGATACATaGACCACCTCAACAAAGATG +
Preference number: 2 (lower is better)
Translates to: MNYILSHPGMKKLKPGLTDKLDT*TTSTKM
Trigger: CATCTTTGTTGAGGTGGTTCATGTATCCAGTTTATC...AGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGATAAAATGTAATTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp GTGCATACACATTGCTATTTGACCTATATGCAAAAGTGGAATGAAATACATAGGCAACCACTGCAGACATaGGCATTAATTCTTATGCCA +
Preference number: 2 (lower is better)
Translates to: VHTHCYLTYMQKWNEIHRQPLQT*ALILMP
Trigger: TGGCATAAGAATTAATGCTCATGTCTGCAGTGGTTG...CCTATGTATTTCATTCCACTTTTGCATATAGGTCAAATAGCAATGTGTATGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp CCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGATGATAATCTTTGAAAGGAGACTATaGCATTTGAGCATAAAGCCT +
Preference number: 2 (lower is better)
Translates to: PLDLIPNLASLTVTQMIIFERRL*HLSIKP
Trigger: AGGCTTTATGCTCAAATGTCATAGTCTCCTTTCAAA...GATTATCATCTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp CCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGATGATAATCCAAACGATATTCACTTaGCTCTTCTCTTGGTTGAAT +
Preference number: 2 (lower is better)
Translates to: PLDLIPNLASLTVTQMIIQTIFT*LFSWLN
Trigger: ATTCAACCAAGAGAAGAGTCAAGTGAATATCGTTTG...GATTATCATCTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CCA 90 bp CCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGATGATAATCGTCTTCTACTTAAGCTaGGTGCATTTAAAATGCAAC +
Preference number: 2 (lower is better)
Translates to: PLDLIPNLASLTVTQMIIVFYLS*VHLKCN
Trigger: GTTGCATTTTAAATGCACCCAGCTTAAGTAGAAGAC...GATTATCATCTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CCA 90 bp AATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCTTTCTCATCCAGCATGTAAACTaGTTTAAGCCAGTTCACAGG +
Preference number: 2 (lower is better)
Translates to: NPERLASHYTHTSCNPFLIQHVN*FKPVHR
Trigger: CCTGTGAACTGGCTTAAACCAGTTTACATGCTGGAT...GAGAAAGGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
3UTR-3UTR TCA 90 bp ATGAATTACATTTTATCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTTCTTTCTCTGAATCCTaGAAGGTTAGCAAGTCATTA +
Preference number: 2 (lower is better)
Translates to: MNYILSHPGMKKLKPGLTSFSES*KVSKSL
Trigger: TAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGA...AGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGATAAAATGTAATTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp GTGCATACACATTGCTATTTGACCTATATGCAAAAGTGGAATGAAATACATAGGGATAAACTGGATACATaGACCACCTCAACAAAGATG +
Preference number: 2 (lower is better)
Translates to: VHTHCYLTYMQKWNEIHRDKLDT*TTSTKM
Trigger: CATCTTTGTTGAGGTGGTTCATGTATCCAGTTTATC...CCTATGTATTTCATTCCACTTTTGCATATAGGTCAAATAGCAATGTGTATGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp ATGAATTACATTTTATCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTTTTGAAAGGAGACTATaGCATTTGAGCATAAAGCCT +
Preference number: 2 (lower is better)
Translates to: MNYILSHPGMKKLKPGLTFERRL*HLSIKP
Trigger: AGGCTTTATGCTCAAATGTCATAGTCTCCTTTCAAA...AGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGATAAAATGTAATTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR GCA 90 bp CCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGATGATAATCTCATTATTTCCATCATaGTTACCTCTCTGTTTACTG +
Preference number: 2 (lower is better)
Translates to: PLDLIPNLASLTVTQMIISLFPS*LPLCLL
Trigger: CAGTAAACAGAGAGGTAAGCATGATGGAAATAATGA...GATTATCATCTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CCA 90 bp AAAACAATTGGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCCTGTACTGGATAAACTaGATACATGAACCACCTCAA +
Preference number: 2 (lower is better)
Translates to: KTIGALTKENVHTHCYLTLYWIN*IHEPPQ
Trigger: TTGAGGTGGTTCATGTATCCAGTTTATCCAGTACAG...GGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACCAATTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CCA 90 bp GTGCATACACATTGCTATTTGACCTATATGCAAAAGTGGAATGAAATACATAGGCTGTACTGGATAAACTaGATACATGAACCACCTCAA +
Preference number: 2 (lower is better)
Translates to: VHTHCYLTYMQKWNEIHRLYWIN*IHEPPQ
Trigger: TTGAGGTGGTTCATGTATCCAGTTTATCCAGTACAG...CCTATGTATTTCATTCCACTTTTGCATATAGGTCAAATAGCAATGTGTATGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp GTGCATACACATTGCTATTTGACCTATATGCAAAAGTGGAATGAAATACATAGGTCTTTCTCTGAATCCTaGAAGGTTAGCAAGTCATTA +
Preference number: 2 (lower is better)
Translates to: VHTHCYLTYMQKWNEIHRSFSES*KVSKSL
Trigger: TAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGA...CCTATGTATTTCATTCCACTTTTGCATATAGGTCAAATAGCAATGTGTATGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR TCA 90 bp GTGCATACACATTGCTATTTGACCTATATGCAAAAGTGGAATGAAATACATAGGAGAATAAAAACAGCCTaGGTATTTCCAAAGCTGAAG +
Preference number: 2 (lower is better)
Translates to: VHTHCYLTYMQKWNEIHRRIKTA*VFPKLK
Trigger: CTTCAGCTTTGGAAATACTCAGGCTGTTTTTATTCT...CCTATGTATTTCATTCCACTTTTGCATATAGGTCAAATAGCAATGTGTATGCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR TCA 72 bp GGCAATGGTTCTATGAAGACAGGAGAGGTAGCAGGCTaGACCGCATTCACTGACCCTATCTCTCAGCTGCTC +
Preference number: 3 (lower is better)
Translates to: GNGSMKTGEVAG*TAFTDPISQLL
Trigger: GAGCAGCTGAGAGATAGGGTCAGTGAATGCGGTTCAGCCTGCTACCTCTCCTGTCTTCATAGAACCATTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR GCA 72 bp CAGGCTGAACCGCATTCACTGACCCTATCTCTCAGCTaGTCCTCCTCACTAGTCAGGTTTTTCCTGTGTACC +
Preference number: 3 (lower is better)
Translates to: QAEPHSLTLSLS*SSSLVRFFLCT
Trigger: GGTACACAGGAAAAACCTGACTAGTGAGGAGGAGCAGCTGAGAGATAGGGTCAGTGAATGCGGTTCAGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CAA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCCATTCGAAAGCTAGGTaGAATAGGACTGGCCTTGAT +
Preference number: 3 (lower is better)
Translates to: LLSRTYPTTADMSINSYAHSKAR*NRTGLD
Trigger: ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CAA 90 bp TCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTGACGCTGTGTTAAAAAACATTCCAAGTGAGTaGGGGTTCCTGACTGCAACA +
Preference number: 3 (lower is better)
Translates to: SHPGMKKLKPGLTDAVLKNIPSE*GFLTAT
Trigger: TGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTT...TTTTAACACAGCGTCAGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CAA 90 bp AAAACAATTGGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCTGTAATCCCAGCAACTaGGGAGGCCGAAGTGGGCGG +
Preference number: 3 (lower is better)
Translates to: KTIGALTKENVHTHCYLTCNPSN*GGRSGR
Trigger: CCGCCCACTTCGGCCTCCCAAGTTGCTGGGATTACA...GGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACCAATTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674104.1
3UTR-3UTR CAA 90 bp CTGGACATTCCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGAATCGTTCTTCCAGGTaGTCTCCTCCAGGGGGATTT +
Preference number: 3 (lower is better)
Translates to: LDIPLDLIPNLASLTVTQNRSSR*SPPGGF
Trigger: AAATCCCCCTGGAGGAGACAACCTGGAAGAACGATT...CTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
3UTR-3UTR CAA 90 bp TCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTGACGCTGTGTTAAAACATTCGAAAGCTAGGTaGAATAGGACTGGCCTTGAT +
Preference number: 3 (lower is better)
Translates to: SHPGMKKLKPGLTDAVLKHSKAR*NRTGLD
Trigger: ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG...TTTTAACACAGCGTCAGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CAA 90 bp TCCTCCTCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATAACATTCCAAGTGAGTaGGGGTTCCTGACTGCAACA +
Preference number: 3 (lower is better)
Translates to: SSSLVRFFLCTPLHYFHHNIPSE*GFLTAT
Trigger: TGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTT...ATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGAGGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CAA 90 bp GGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTAGAATGCCATCATTCGAAAGCTAGGTaGAATAGGACTGGCCTTGAT +
Preference number: 3 (lower is better)
Translates to: GSMHHVACPNKKQTLECHHSKAR*NRTGLD
Trigger: ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG...ATGGCATTCTAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CAA 90 bp TATAAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGAACATTCCAAGTGAGTaGGGGTTCCTGACTGCAACA +
Preference number: 3 (lower is better)
Translates to: YKNIPSELGFLTATFNQTNIPSE*GFLTAT
Trigger: TGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTT...CGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CAA 90 bp AAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGGAAACATGTGGTTTACAGTaGAGGCAGAAGATGAAGGTC +
Preference number: 3 (lower is better)
Translates to: KNIPSELGFLTATFNQTETCGLQ*RQKMKV
Trigger: GACCTTCATCTTCTGCCTCAACTGTAAACCACATGT...TTCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CAA 90 bp CAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACCTCTCTGTACATGTGGTTTACAGTaGAGGCAGAAGATGAAGGTC +
Preference number: 3 (lower is better)
Translates to: QVFPVYPTSLFPSCLPLCTCGLQ*RQKMKV
Trigger: GACCTTCATCTTCTGCCTCAACTGTAAACCACATGT...ACAGAGAGGTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CAA 90 bp TATGTGACATTCAAAGAGTATCGGCCAGCTGGTAATGTTGGATGTAAATCACTTAATCGTTCTTCCAGGTaGTCTCCTCCAGGGGGATTT +
Preference number: 3 (lower is better)
Translates to: YVTFKEYRPAGNVGCKSLNRSSR*SPPGGF
Trigger: AAATCCCCCTGGAGGAGACAACCTGGAAGAACGATT...AAGTGATTTACATCCAACATTACCAGCTGGCCGATACTCTTTGAATGTCACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
3UTR-3UTR CAA 90 bp CAACTCCCAGAAGGAAGGAGATGGATCCAACAGCGATGTAAGCAATCCCCAAAAATAAGACGATACAACTaGCGAAAAGTAGGTAATGCT +
Preference number: 3 (lower is better)
Translates to: QLPEGRRWIQQRCKQSPKIRRYN*RKVGNA
Trigger: AGCATTACCTACTTTTCGCAAGTTGTATCGTCTTAT...TTTTGGGGATTGCTTACATCGCTGTTGGATCCATCTCCTTCCTTCTGGGAGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
3UTR TCA 72 bp ATCGTTCTTCCAGGTTGTCTCCTCCAGGGGGATTTCTaGATTTCACATTTTTATCTGTCCACCAAGCAATAC +
Preference number: 3 (lower is better)
Translates to: IVLPGCLLQGDF*ISHFYLSTKQY
Trigger: GTATTGCTTGGTGGACAGATAAAAATGTGAAATTCAGAAATCCCCCTGGAGGAGACAACCTGGAAGAACGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
3UTR-3UTR CAA 90 bp CATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTAACATGTGGTTTACAGTaGAGGCAGAAGATGAAGGTC +
Preference number: 3 (lower is better)
Translates to: HERGSMHHVACPNKKQTLTCGLQ*RQKMKV
Trigger: GACCTTCATCTTCTGCCTCAACTGTAAACCACATGT...TAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CAA 90 bp TCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACACATGTGGTTTACAGTaGAGGCAGAAGATGAAGGTC +
Preference number: 3 (lower is better)
Translates to: SLVRFFLCTPLHYFHHAYTCGLQ*RQKMKV
Trigger: GACCTTCATCTTCTGCCTCAACTGTAAACCACATGT...GTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CAA 90 bp TCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACGGCCAGCTGGTAATGTaGGATGTAAATCACTTTTCC +
Preference number: 3 (lower is better)
Translates to: SLVRFFLCTPLHYFHHAYGQLVM*DVNHFS
Trigger: GGAAAAGTGATTTACATCCAACATTACCAGCTGGCC...GTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
3UTR-3UTR CAA 90 bp CAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACCTCTCTGTTCATTAAACATGCTGTaGGCAATAGCTCCACAAGGA +
Preference number: 3 (lower is better)
Translates to: QVFPVYPTSLFPSCLPLCSLNML*AIAPQG
Trigger: TCCTTGTGGAGCTATTGCCAACAGCATGTTTAATGA...ACAGAGAGGTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673989.1
3UTR-3UTR CAA 90 bp CCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGATGATAATCCATTCGAAAGCTAGGTaGAATAGGACTGGCCTTGAT +
Preference number: 3 (lower is better)
Translates to: PLDLIPNLASLTVTQMIIHSKAR*NRTGLD
Trigger: ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG...GATTATCATCTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CAA 90 bp TCCTCCTCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATACAAACGATATTCACTaGACTCTTCTCTTGGTTGAA +
Preference number: 3 (lower is better)
Translates to: SSSLVRFFLCTPLHYFHHTNDIH*TLLLVE
Trigger: TTCAACCAAGAGAAGAGTCAAGTGAATATCGTTTGT...ATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGAGGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CAA 90 bp CTGGACATTCCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGAACAACACTGGAGCATaGTTATTTTATCAAGACACC +
Preference number: 3 (lower is better)
Translates to: LDIPLDLIPNLASLTVTQNNTGA*LFYQDT
Trigger: GGTGTCTTGATAAAATAACAATGCTCCAGTGTTGTT...CTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CAA 90 bp TCCTCCTCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATAACAACACTGGAGCATaGTTATTTTATCAAGACACC +
Preference number: 3 (lower is better)
Translates to: SSSLVRFFLCTPLHYFHHNNTGA*LFYQDT
Trigger: GGTGTCTTGATAAAATAACAATGCTCCAGTGTTGTT...ATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGAGGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR TCA 72 bp ATCATGCTTACCTCTCTGTTTACTGGACATTCCCCTTaGTCTAATACCAAACTTAGCCAGTCTAACTGTAAC +
Preference number: 3 (lower is better)
Translates to: IMLTSLFTGHSP*SNTKLSQSNCN
Trigger: GTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAGTAAACAGAGAGGTAAGCATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR CCA 72 bp TCCATTATTATCTGGGTCAGAATCCAGCATGTAAACTaGTTTAAGCCAGTTCACAGGCTTTGTTGTACCTTT +
Preference number: 3 (lower is better)
Translates to: SIIIWVRIQHVN*FKPVHRLCCTF
Trigger: AAAGGTACAACAAAGCCTGTGAACTGGCTTAAACCAGTTTACATGCTGGATTCTGACCCAGATAATAATGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
3UTR-3UTR CAA 90 bp GTGCATACACATTGCTATTTGACCTATATGCAAAAGTGGAATGAAATACATAGGCATTCGAAAGCTAGGTaGAATAGGACTGGCCTTGAT +
Preference number: 3 (lower is better)
Translates to: VHTHCYLTYMQKWNEIHRHSKAR*NRTGLD
Trigger: ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG...CCTATGTATTTCATTCCACTTTTGCATATAGGTCAAATAGCAATGTGTATGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CAA 90 bp GTGCATACACATTGCTATTTGACCTATATGCAAAAGTGGAATGAAATACATAGGACATGTGGTTTACAGTaGAGGCAGAAGATGAAGGTC +
Preference number: 3 (lower is better)
Translates to: VHTHCYLTYMQKWNEIHRTCGLQ*RQKMKV
Trigger: GACCTTCATCTTCTGCCTCAACTGTAAACCACATGT...CCTATGTATTTCATTCCACTTTTGCATATAGGTCAAATAGCAATGTGTATGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CAA 90 bp CCCATGCTTCACAGAGACTATACGAATGTTCCATACTCTTCATATTTAGCAACAGTAACGACGATGGTTTaGATAGAAATTAGACAGTCC +
Preference number: 3 (lower is better)
Translates to: PMLHRDYTNVPYSSYLATVTTMV*IEIRQS
Trigger: GGACTGTCTAATTTCTATCAAAACCATCGTCGTTAC...TGTTGCTAAATATGAAGAGTATGGAACATTCGTATAGTCTCTGTGAAGCATGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673989.1
3UTR-3UTR CAA 90 bp CCCATGCTTCACAGAGACTATACGAATGTTCCATACTCTTCATATTTAGCAACACATACACATTGCTATTaGACCTATATGCAAAAGTGG +
Preference number: 3 (lower is better)
Translates to: PMLHRDYTNVPYSSYLATHTHCY*TYMQKW
Trigger: CCACTTTTGCATATAGGTCAAATAGCAATGTGTATG...TGTTGCTAAATATGAAGAGTATGGAACATTCGTATAGTCTCTGTGAAGCATGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CAA 90 bp CCCATGCTTCACAGAGACTATACGAATGTTCCATACTCTTCATATTTAGCAACAAACAACACTGGAGCATaGTTATTTTATCAAGACACC +
Preference number: 3 (lower is better)
Translates to: PMLHRDYTNVPYSSYLATNNTGA*LFYQDT
Trigger: GGTGTCTTGATAAAATAACAATGCTCCAGTGTTGTT...TGTTGCTAAATATGAAGAGTATGGAACATTCGTATAGTCTCTGTGAAGCATGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CAA 90 bp CCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGATGATAATCAACAACACTGGAGCATaGTTATTTTATCAAGACACC +
Preference number: 3 (lower is better)
Translates to: PLDLIPNLASLTVTQMIINNTGA*LFYQDT
Trigger: GGTGTCTTGATAAAATAACAATGCTCCAGTGTTGTT...GATTATCATCTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CAA 90 bp AAAACAATTGGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCCTCCACAAGGAGCAATaGGTTTGTCTTCATTTCTTC +
Preference number: 3 (lower is better)
Translates to: KTIGALTKENVHTHCYLTLHKEQ*VCLHFF
Trigger: GAAGAAATGAAGACAAACCAATTGCTCCTTGTGGAG...GGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACCAATTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673989.1
3UTR TCA 72 bp TTACATATAAAAACATTCCAAGTGAGTTGGGGTTCCTaGCTGCAACATTCAACCAAACGGAAAGAGGAATTT +
Preference number: 3 (lower is better)
Translates to: LHIKTFQVSWGS*LQHSTKRKEEF
Trigger: AAATTCCTCTTTCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATATGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
3UTR TCA 72 bp AACTTAGCCAGTCTAACTGTAACTCAGATGATAATCTaGCCACTTCCTGGTAAGAACAAATGGTTAATGTTG +
Preference number: 3 (lower is better)
Translates to: NLASLTVTQMII*PLPGKNKWLML
Trigger: CAACATTAACCATTTGTTCTTACCAGGAAGTGGTCAGATTATCATCTGAGTTACAGTTAGACTGGCTAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR-3UTR CAA 90 bp ATGAATTACATTTTATCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTGAATGTGCATACACATaGCTATTTGACCTATATGCA +
Preference number: 3 (lower is better)
Translates to: MNYILSHPGMKKLKPGLTECAYT*LFDLYA
Trigger: TGCATATAGGTCAAATAGCAATGTGTATGCACATTC...AGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGATAAAATGTAATTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCTCCGAGTCTTCGCGGTaGCCCCCGGAGCACACGGGG +
Preference number: 4 (lower is better)
Translates to: LLSRTYPTTADMSINSYASESSR*PPEHTG
Trigger: CCCCGTGTGCTCCGGGGGGCACCGCGAAGACTCGGA...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR GCA 90 bp AGGATGGTAGTCCTCCTTAAACAGCACAGACTCAATCTGGAAAGAGTGGCAGAACGCCGCTCCGCGATTTaGAGGTGGACCACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RMVVLLKQHRLNLERVAERRSAI*RWTTQG
Trigger: CCCCTGGGTGGTCCACCTGCAAATCGCGGAGCGGCG...TTCTGCCACTCTTTCCAGATTGAGTCTGTGCTGTTTAAGGAGGACTACCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR GCA 90 bp CTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCATCCGAGTCTTCGCGGTaGCCCCCGGAGCACACGGGG +
Preference number: 4 (lower is better)
Translates to: LTRYQHSKARLNRTGLDASESSR*PPEHTG
Trigger: CCCCGTGTGCTCCGGGGGGCACCGCGAAGACTCGGA...TGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR GCA 90 bp TCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGCTTCGCCGCTCCGCGATTTaGAGGTGGACCACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SKARLNRTGLDAHADDLLRRSAI*RWTTQG
Trigger: CCCCTGGGTGGTCCACCTGCAAATCGCGGAGCGGCG...AAGCAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR GCA 90 bp CTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACGCCGCTCCGCGATTTaGAGGTGGACCACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LTRYQHSKARLNRTGLDARRSAI*RWTTQG
Trigger: CCCCTGGGTGGTCCACCTGCAAATCGCGGAGCGGCG...TGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR GCA 90 bp GGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTAGAATGCCATTCCGAGTCTTCGCGGTaGCCCCCGGAGCACACGGGG +
Preference number: 4 (lower is better)
Translates to: GSMHHVACPNKKQTLECHSESSR*PPEHTG
Trigger: CCCCGTGTGCTCCGGGGGGCACCGCGAAGACTCGGA...ATGGCATTCTAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR GCA 90 bp CACATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATCGCCGCTCCGCGATTTaGAGGTGGACCACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: HMKEALCIMWPVRIKSKHRRSAI*RWTTQG
Trigger: CCCCTGGGTGGTCCACCTGCAAATCGCGGAGCGGCG...ATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CCA 90 bp TCCTCCTCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATTCCGCGATTTGCAGGTaGACCACCCAGGGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SSSLVRFFLCTPLHYFHHSAICR*TTQGAR
Trigger: GCGGGCCCCCTGGGTGGTCCACCTGCAAATCGCGGA...ATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGAGGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR CCA 90 bp CACATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTCCGCGATTTGCAGGTaGACCACCCAGGGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: HMKEALCIMWPVRIKSKHSAICR*TTQGAR
Trigger: GCGGGCCCCCTGGGTGGTCCACCTGCAAATCGCGGA...ATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CCA 90 bp GGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTAGAATGCCATTCCGCGATTTGCAGGTaGACCACCCAGGGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GSMHHVACPNKKQTLECHSAICR*TTQGAR
Trigger: GCGGGCCCCCTGGGTGGTCCACCTGCAAATCGCGGA...ATGGCATTCTAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR GCA 90 bp TCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACCGCCGCTCCGCGATTTaGAGGTGGACCACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SLVRFFLCTPLHYFHHAYRRSAI*RWTTQG
Trigger: CCCCTGGGTGGTCCACCTGCAAATCGCGGAGCGGCG...GTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR GCA 90 bp CCCATGCTTCACAGAGACTATACGAATGTTCCATACTCTTCATATTTAGCAACATCCGAGTCTTCGCGGTaGCCCCCGGAGCACACGGGG +
Preference number: 4 (lower is better)
Translates to: PMLHRDYTNVPYSSYLATSESSR*PPEHTG
Trigger: CCCCGTGTGCTCCGGGGGGCACCGCGAAGACTCGGA...TGTTGCTAAATATGAAGAGTATGGAACATTCGTATAGTCTCTGTGAAGCATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR GCA 90 bp TCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTGACGCTGTGTTAAAAGCCGTAAGGATGGGCTaGCAAGCTGGCAGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: SHPGMKKLKPGLTDAVLKAVRMG*QAGSRC
Trigger: GCAACGGCTGCCAGCTTGGCAGCCCATCCTTACGGC...TTTTAACACAGCGTCAGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR GCA 90 bp CTGGACATTCCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGCCAGGGAGCAGAGGTTaGAGTGAGCCGACGTCGCGC +
Preference number: 4 (lower is better)
Translates to: LDIPLDLIPNLASLTVTQPGSRG*SEPTSR
Trigger: GCGCGACGTCGGCTCACTGCAACCTCTGCTCCCTGG...CTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674104.1
CDS-3UTR CCA 90 bp AATGACATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCTCCGCGATTTGCAGGTaGACCACCCAGGGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: NDILTRYQHSKARLNRTGSAICR*TTQGAR
Trigger: GCGGGCCCCCTGGGTGGTCCACCTGCAAATCGCGGA...GCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTATGTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR TCA 90 bp GGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTAGAATGCCATTCCGCCAAAGGCTGCTaGCGGGAAGCGAAAGTCGGC +
Preference number: 4 (lower is better)
Translates to: GSMHHVACPNKKQTLECHSAKGC*REAKVG
Trigger: GCCGACTTTCGCTTCCCGTCAGCAGCCTTTGGCGGA...ATGGCATTCTAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475111.6
CDS-3UTR GCA 90 bp TCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCTCCGAGTCTTCGCGGTaGCCCCCGGAGCACACGGGG +
Preference number: 4 (lower is better)
Translates to: SLNPERLASHYTHTSCNPSESSR*PPEHTG
Trigger: CCCCGTGTGCTCCGGGGGGCACCGCGAAGACTCGGA...GGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CCA 90 bp TCCTCCTCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATATCGCCATCGATCCCTaGGGCGCCGCTCCGCGATTT +
Preference number: 4 (lower is better)
Translates to: SSSLVRFFLCTPLHYFHHIAIDP*GAAPRF
Trigger: AAATCGCGGAGCGGCGCCCCAGGGATCGATGGCGAT...ATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGAGGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR CCA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCGATGGGCTGCCAAGCTaGCAGCCGTTGCTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: LLSRTYPTTADMSINSYADGLPS*QPLLFE
Trigger: TTCAAACAGCAACGGCTGCCAGCTTGGCAGCCCATC...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR TCA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCCTGAACCGCATTCACTaGCCCTATCTCTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLSRTYPTTADMSINSYALNRIH*PYLSAA
Trigger: AGCAGCTGAGAGATAGGGTCAGTGAATGCGGTTCAG...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp AAAACAATTGGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCTCCGAGTCTTCGCGGTaGCCCCCGGAGCACACGGGG +
Preference number: 4 (lower is better)
Translates to: KTIGALTKENVHTHCYLTSESSR*PPEHTG
Trigger: CCCCGTGTGCTCCGGGGGGCACCGCGAAGACTCGGA...GGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACCAATTGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR GCA 90 bp AATGACATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCGCCGTAAGGATGGGCTaGCAAGCTGGCAGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: NDILTRYQHSKARLNRTGAVRMG*QAGSRC
Trigger: GCAACGGCTGCCAGCTTGGCAGCCCATCCTTACGGC...GCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTATGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR GCA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCACCCTATCTCTCAGCTaGTCCTCCTCACTAGTCAGG +
Preference number: 4 (lower is better)
Translates to: LLSRTYPTTADMSINSYATLSLS*SSSLVR
Trigger: CCTGACTAGTGAGGAGGAGCAGCTGAGAGATAGGGT...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp TCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCTCCGCGATTTGCAGGTaGACCACCCAGGGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SLNPERLASHYTHTSCNPSAICR*TTQGAR
Trigger: GCGGGCCCCCTGGGTGGTCCACCTGCAAATCGCGGA...GGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CCA 90 bp ATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATATCGCCATCGATCCCTaGGGCGCCGCTCCGCGATTT +
Preference number: 4 (lower is better)
Translates to: ILTRYQHSKARLNRTGLDIAIDP*GAAPRF
Trigger: AAATCGCGGAGCGGCGCCCCAGGGATCGATGGCGAT...ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CCA 90 bp CATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTAATCGCCATCGATCCCTaGGGCGCCGCTCCGCGATTT +
Preference number: 4 (lower is better)
Translates to: HERGSMHHVACPNKKQTLIAIDP*GAAPRF
Trigger: AAATCGCGGAGCGGCGCCCCAGGGATCGATGGCGAT...TAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CCA 90 bp AATGACATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCATCGCCATCGATCCCTaGGGCGCCGCTCCGCGATTT +
Preference number: 4 (lower is better)
Translates to: NDILTRYQHSKARLNRTGIAIDP*GAAPRF
Trigger: AAATCGCGGAGCGGCGCCCCAGGGATCGATGGCGAT...GCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTATGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CCA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCTCAATCTGGAAAGAGTaGCAGAAACCCCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LLSRTYPTTADMSINSYASIWKE*QKPLSP
Trigger: GGGGGAGAGGGGTTTCTGCCACTCTTTCCAGATTGA...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CAACTCCCAGAAGGAAGGAGATGGATCCAACAGCGATGTAAGCAATCCCCAAAATCAATCTGGAAAGAGTaGCAGAAACCCCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: QLPEGRRWIQQRCKQSPKSIWKE*QKPLSP
Trigger: GGGGGAGAGGGGTTTCTGCCACTCTTTCCAGATTGA...TTTTGGGGATTGCTTACATCGCTGTTGGATCCATCTCCTTCCTTCTGGGAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
CDS-3UTR TCA 90 bp TCCTCCTCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCAGCCGTTGCTGTTTaGAGGCCGTGTTATCCGGTC +
Preference number: 4 (lower is better)
Translates to: SSSLVRFFLCTPLHYFHHAAVAV*RPCYPV
Trigger: GACCGGATAACACGGCCTTCAAACAGCAACGGCTGC...ATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGAGGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR GCA 90 bp CATTCAAAGAGTATCGGCCAGCTGGTAATGTTGGATGTAAATCACTTTTCCTTTGCCGTAAGGATGGGCTaGCAAGCTGGCAGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: HSKSIGQLVMLDVNHFSFAVRMG*QAGSRC
Trigger: GCAACGGCTGCCAGCTTGGCAGCCCATCCTTACGGC...AAAGGAAAAGTGATTTACATCCAACATTACCAGCTGGCCGATACTCTTTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
CDS-3UTR CCA 90 bp CCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGATGATAATCATCGCCATCGATCCCTaGGGCGCCGCTCCGCGATTT +
Preference number: 4 (lower is better)
Translates to: PLDLIPNLASLTVTQMIIIAIDP*GAAPRF
Trigger: AAATCGCGGAGCGGCGCCCCAGGGATCGATGGCGAT...GATTATCATCTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR CCA 90 bp GAGTTCCTTAGAGATCAAACAGCAGAAAACAGGAGGAACTTAGGCCATCAATGGGATGGGCTGCCAAGCTaGCAGCCGTTGCTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: EFLRDQTAENRRNLGHQWDGLPS*QPLLFE
Trigger: TTCAAACAGCAACGGCTGCCAGCTTGGCAGCCCATC...CCATTGATGGCCTAAGTTCCTCCTGTTTTCTGCTGTTTGATCTCTAAGGAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR TCA 90 bp TATAAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGGCAGCCGTTGCTGTTTaGAGGCCGTGTTATCCGGTC +
Preference number: 4 (lower is better)
Translates to: YKNIPSELGFLTATFNQTAAVAV*RPCYPV
Trigger: GACCGGATAACACGGCCTTCAAACAGCAACGGCTGC...CGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR TCA 90 bp ATGGTACAAAAGCAAGGTGTCACATCCGGAGATAAACATTTATTACAGGGACTGGCAGCCGTTGCTGTTTaGAGGCCGTGTTATCCGGTC +
Preference number: 4 (lower is better)
Translates to: MVQKQGVTSGDKHLLQGLAAVAV*RPCYPV
Trigger: GACCGGATAACACGGCCTTCAAACAGCAACGGCTGC...CAGTCCCTGTAATAAATGTTTATCTCCGGATGTGACACCTTGCTTTTGTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673989.1
CDS-3UTR TCA 90 bp TCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGCTTCTGAACCGCATTCACTaGCCCTATCTCTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SKARLNRTGLDAHADDLLLNRIH*PYLSAA
Trigger: AGCAGCTGAGAGATAGGGTCAGTGAATGCGGTTCAG...AAGCAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp TATAAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGGGAGAGGTAGCAGGCTaGACCGCATTCACTGACCCT +
Preference number: 4 (lower is better)
Translates to: YKNIPSELGFLTATFNQTGEVAG*TAFTDP
Trigger: AGGGTCAGTGAATGCGGTTCAGCCTGCTACCTCTCC...CGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp ATGGTACAAAAGCAAGGTGTCACATCCGGAGATAAACATTTATTACAGGGACTGGGAGAGGTAGCAGGCTaGACCGCATTCACTGACCCT +
Preference number: 4 (lower is better)
Translates to: MVQKQGVTSGDKHLLQGLGEVAG*TAFTDP
Trigger: AGGGTCAGTGAATGCGGTTCAGCCTGCTACCTCTCC...CAGTCCCTGTAATAAATGTTTATCTCCGGATGTGACACCTTGCTTTTGTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673989.1
CDS-3UTR TCA 90 bp ATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGGAGAGGTAGCAGGCTaGACCGCATTCACTGACCCT +
Preference number: 4 (lower is better)
Translates to: ILTRYQHSKARLNRTGLDGEVAG*TAFTDP
Trigger: AGGGTCAGTGAATGCGGTTCAGCCTGCTACCTCTCC...ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp CTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACAAGCTGGCAGCCGTTaGTGTTTGAAGGCCGTGTTA +
Preference number: 4 (lower is better)
Translates to: LTRYQHSKARLNRTGLDAQAGSR*CLKAVL
Trigger: TAACACGGCCTTCAAACAGCAACGGCTGCCAGCTTG...TGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR GCA 90 bp GAGTTCCTTAGAGATCAAACAGCAGAAAACAGGAGGAACTTAGGCCATCAATGGACCCTATCTCTCAGCTaGTCCTCCTCACTAGTCAGG +
Preference number: 4 (lower is better)
Translates to: EFLRDQTAENRRNLGHQWTLSLS*SSSLVR
Trigger: CCTGACTAGTGAGGAGGAGCAGCTGAGAGATAGGGT...CCATTGATGGCCTAAGTTCCTCCTGTTTTCTGCTGTTTGATCTCTAAGGAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp ATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGTAATCCCAGCAACTTaGGAGGCCGAAGTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: ILTRYQHSKARLNRTGLDVIPAT*EAEVGG
Trigger: TCCGCCCACTTCGGCCTCCCAAGTTGCTGGGATTAC...ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674104.1
CDS-3UTR TCA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCCACGTTGCCCTCAAATaGCTTTTCCAGTGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: LLSRTYPTTADMSINSYAHVALK*LFQCEV
Trigger: AACTTCACACTGGAAAAGTCATTTGAGGGCAACGTG...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCATTCGAAAGCTAGGTTaGATAGGACTGGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: LLSRTYPTTADMSINSYAIRKLG*IGLALM
Trigger: CATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAAT...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CAACTCCCAGAAGGAAGGAGATGGATCCAACAGCGATGTAAGCAATCCCCAAAAATTCGAAAGCTAGGTTaGATAGGACTGGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: QLPEGRRWIQQRCKQSPKIRKLG*IGLALM
Trigger: CATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAAT...TTTTGGGGATTGCTTACATCGCTGTTGGATCCATCTCCTTCCTTCTGGGAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
CDS-3UTR TCA 90 bp CAGTCTCCATTAAGCACTTACATGTGGTTTACAGTTGAGGCAGAAGATGAAGGTCTGAACCGCATTCACTaGCCCTATCTCTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QSPLSTYMWFTVEAEDEGLNRIH*PYLSAA
Trigger: AGCAGCTGAGAGATAGGGTCAGTGAATGCGGTTCAG...ACCTTCATCTTCTGCCTCAACTGTAAACCACATGTAAGTGCTTAATGGAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp GGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTAGAATGCCATCAAGCTGGCAGCCGTTaGTGTTTGAAGGCCGTGTTA +
Preference number: 4 (lower is better)
Translates to: GSMHHVACPNKKQTLECHQAGSR*CLKAVL
Trigger: TAACACGGCCTTCAAACAGCAACGGCTGCCAGCTTG...ATGGCATTCTAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR GCA 90 bp TCCTCCTCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATCAAGCTGGCAGCCGTTaGTGTTTGAAGGCCGTGTTA +
Preference number: 4 (lower is better)
Translates to: SSSLVRFFLCTPLHYFHHQAGSR*CLKAVL
Trigger: TAACACGGCCTTCAAACAGCAACGGCTGCCAGCTTG...ATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGAGGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR GCA 90 bp AAAACAATTGGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCGCCGTAAGGATGGGCTaGCAAGCTGGCAGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: KTIGALTKENVHTHCYLTAVRMG*QAGSRC
Trigger: GCAACGGCTGCCAGCTTGGCAGCCCATCCTTACGGC...GGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACCAATTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR GCA 90 bp AATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCTTTCTCGCCGTAAGGATGGGCTaGCAAGCTGGCAGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: NPERLASHYTHTSCNPFLAVRMG*QAGSRC
Trigger: GCAACGGCTGCCAGCTTGGCAGCCCATCCTTACGGC...GAGAAAGGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR GCA 90 bp AGGATGGTAGTCCTCCTTAAACAGCACAGACTCAATCTGGAAAGAGTGGCAGAAATGAAAGAGGCTCTATaGATCATGTGGCCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: RMVVLLKQHRLNLERVAEMKEAL*IMWPVR
Trigger: TCGGACAGGCCACATGATGCATAGAGCCTCTTTCAT...TTCTGCCACTCTTTCCAGATTGAGTCTGTGCTGTTTAAGGAGGACTACCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp CTGGACATTCCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGACCCTATCTCTCAGCTaGTCCTCCTCACTAGTCAGG +
Preference number: 4 (lower is better)
Translates to: LDIPLDLIPNLASLTVTQTLSLS*SSSLVR
Trigger: CCTGACTAGTGAGGAGGAGCAGCTGAGAGATAGGGT...CTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp TCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTGACGCTGTGTTAAAACTGAGGCAAGAGAAATaGTTGAACCCAGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: SHPGMKKLKPGLTDAVLKLRQEK*LNPGSR
Trigger: TCTGCTCCCTGGGTTCAAGCATTTCTCTTGCCTCAG...TTTTAACACAGCGTCAGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674104.1
CDS-3UTR CCA 90 bp AAAACAATTGGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCATCGCCATCGATCCCTaGGGCGCCGCTCCGCGATTT +
Preference number: 4 (lower is better)
Translates to: KTIGALTKENVHTHCYLTIAIDP*GAAPRF
Trigger: AAATCGCGGAGCGGCGCCCCAGGGATCGATGGCGAT...GGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACCAATTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR CCA 90 bp AATGACATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCGATGGGCTGCCAAGCTaGCAGCCGTTGCTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: NDILTRYQHSKARLNRTGDGLPS*QPLLFE
Trigger: TTCAAACAGCAACGGCTGCCAGCTTGGCAGCCCATC...GCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTATGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR TCA 90 bp TCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGCTTGGATGTTGTTGGAGGTaGCAAAAATGCCAATGCCGA +
Preference number: 4 (lower is better)
Translates to: SKARLNRTGLDAHADDLLGCCWR*QKCQCR
Trigger: TCGGCATTGGCATTTTTGTCACCTCCAACAACATCC...AAGCAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR TCA 90 bp AGGATGGTAGTCCTCCTTAAACAGCACAGACTCAATCTGGAAAGAGTGGCAGAACACGTTGCCCTCAAATaGCTTTTCCAGTGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: RMVVLLKQHRLNLERVAEHVALK*LFQCEV
Trigger: AACTTCACACTGGAAAAGTCATTTGAGGGCAACGTG...TTCTGCCACTCTTTCCAGATTGAGTCTGTGCTGTTTAAGGAGGACTACCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCCAGATGAGAAAGTGCTaGAAGGGCTCTTCAACTTTT +
Preference number: 4 (lower is better)
Translates to: LLSRTYPTTADMSINSYAQMRKC*KGSSTF
Trigger: AAAAGTTGAAGAGCCCTTTCAGCACTTTCTCATCTG...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCACTGGACATTCCCCTTaGTCTAATACCAAACTTAGC +
Preference number: 4 (lower is better)
Translates to: LLSRTYPTTADMSINSYATGHSP*SNTKLS
Trigger: GCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAGT...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CAACTCCCAGAAGGAAGGAGATGGATCCAACAGCGATGTAAGCAATCCCCAAAAACTGGACATTCCCCTTaGTCTAATACCAAACTTAGC +
Preference number: 4 (lower is better)
Translates to: QLPEGRRWIQQRCKQSPKTGHSP*SNTKLS
Trigger: GCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAGT...TTTTGGGGATTGCTTACATCGCTGTTGGATCCATCTCCTTCCTTCTGGGAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
CDS-3UTR TCA 90 bp TCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACCTGAACCGCATTCACTaGCCCTATCTCTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLVRFFLCTPLHYFHHAYLNRIH*PYLSAA
Trigger: AGCAGCTGAGAGATAGGGTCAGTGAATGCGGTTCAG...GTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp GGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCTATATGCAAGGAGAGGTAGCAGGCTaGACCGCATTCACTGACCCT +
Preference number: 4 (lower is better)
Translates to: GALTKENVHTHCYLTYMQGEVAG*TAFTDP
Trigger: AGGGTCAGTGAATGCGGTTCAGCCTGCTACCTCTCC...TTGCATATAGGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp TCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGCTTTGGAACTGTCCATTGTaGGTTTTGGAAGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: SKARLNRTGLDAHADDLLWNCPL*VLEGCR
Trigger: CCTGCATCCTTCCAAAACTCACAATGGACAGTTCCA...AAGCAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370050.9
CDS-3UTR GCA 90 bp CTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCAATGAAAGAGGCTCTATaGATCATGTGGCCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: LTRYQHSKARLNRTGLDAMKEAL*IMWPVR
Trigger: TCGGACAGGCCACATGATGCATAGAGCCTCTTTCAT...TGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp CTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCAGTTGGGGTTCCTGACTaGAACATTCAACCAAACGGA +
Preference number: 4 (lower is better)
Translates to: LTRYQHSKARLNRTGLDAVGVPD*NIQPNG
Trigger: TCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAAC...TGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp ATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATACCCTATCTCTCAGCTaGTCCTCCTCACTAGTCAGG +
Preference number: 4 (lower is better)
Translates to: ILTRYQHSKARLNRTGLDTLSLS*SSSLVR
Trigger: CCTGACTAGTGAGGAGGAGCAGCTGAGAGATAGGGT...ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp TATAAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGTCAATCTGGAAAGAGTaGCAGAAACCCCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: YKNIPSELGFLTATFNQTSIWKE*QKPLSP
Trigger: GGGGGAGAGGGGTTTCTGCCACTCTTTCCAGATTGA...CGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCAAGCACAGACTCAATCTaGAAAGAGTGGCAGAAACCC +
Preference number: 4 (lower is better)
Translates to: LTRYQHSKARLNRTGLDASTDSI*KEWQKP
Trigger: GGGTTTCTGCCACTCTTTCCAGATTGAGTCTGTGCT...TGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGAGCACAGACTCAATCTaGAAAGAGTGGCAGAAACCC +
Preference number: 4 (lower is better)
Translates to: HSKARLNRTGLDAHADDLSTDSI*KEWQKP
Trigger: GGGTTTCTGCCACTCTTTCCAGATTGAGTCTGTGCT...CAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp AAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGGAAGTCCATTGTGAGTTTTaGAAGGATGCAGGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: KNIPSELGFLTATFNQTEVHCEF*KDAGLH
Trigger: GTGGAGCCCTGCATCCTTCCAAAACTCACAATGGAC...TTCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370050.9
CDS-3UTR CCA 90 bp GAGTTCCTTAGAGATCAAACAGCAGAAAACAGGAGGAACTTAGGCCATCAATGGGTTCACATTCCTTACTaGGATTCTCGATCTCGCGGA +
Preference number: 4 (lower is better)
Translates to: EFLRDQTAENRRNLGHQWVHIPY*DSRSRG
Trigger: TCCGCGAGATCGAGAATCCCAGTAAGGAATGTGAAC...CCATTGATGGCCTAAGTTCCTCCTGTTTTCTGCTGTTTGATCTCTAAGGAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673730.1
CDS-3UTR TCA 90 bp AAAACAATTGGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCGCAGCCGTTGCTGTTTaGAGGCCGTGTTATCCGGTC +
Preference number: 4 (lower is better)
Translates to: KTIGALTKENVHTHCYLTAAVAV*RPCYPV
Trigger: GACCGGATAACACGGCCTTCAAACAGCAACGGCTGC...GGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACCAATTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR TCA 90 bp CATCTTTCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTGCAGCCGTTGCTGTTTaGAGGCCGTGTTATCCGGTC +
Preference number: 4 (lower is better)
Translates to: HLSLNPERLASHYTHTSCAAVAV*RPCYPV
Trigger: GACCGGATAACACGGCCTTCAAACAGCAACGGCTGC...ACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR TCA 90 bp TCCTCCTCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGGATGTTGTTGGAGGTaGCAAAAATGCCAATGCCGA +
Preference number: 4 (lower is better)
Translates to: SSSLVRFFLCTPLHYFHHGCCWR*QKCQCR
Trigger: TCGGCATTGGCATTTTTGTCACCTCCAACAACATCC...ATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGAGGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000674104.1
CDS-3UTR TCA 90 bp GGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTAGAATGCCATGGATGTTGTTGGAGGTaGCAAAAATGCCAATGCCGA +
Preference number: 4 (lower is better)
Translates to: GSMHHVACPNKKQTLECHGCCWR*QKCQCR
Trigger: TCGGCATTGGCATTTTTGTCACCTCCAACAACATCC...ATGGCATTCTAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR TCA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCCTCCAGGGGGATTTCTaGATTTCACATTTTTATCTG +
Preference number: 4 (lower is better)
Translates to: LLSRTYPTTADMSINSYALQGDF*ISHFYL
Trigger: CAGATAAAAATGTGAAATTCAGAAATCCCCCTGGAG...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp TCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGCTTATTCGAAAGCTAGGTTaGATAGGACTGGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: SKARLNRTGLDAHADDLLIRKLG*IGLALM
Trigger: CATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAAT...AAGCAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp CCCATGCTTCACAGAGACTATACGAATGTTCCATACTCTTCATATTTAGCAACACAAGCTGGCAGCCGTTaGTGTTTGAAGGCCGTGTTA +
Preference number: 4 (lower is better)
Translates to: PMLHRDYTNVPYSSYLATQAGSR*CLKAVL
Trigger: TAACACGGCCTTCAAACAGCAACGGCTGCCAGCTTG...TGTTGCTAAATATGAAGAGTATGGAACATTCGTATAGTCTCTGTGAAGCATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR GCA 90 bp CACATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATGTTGGGGTTCCTGACTaGAACATTCAACCAAACGGA +
Preference number: 4 (lower is better)
Translates to: HMKEALCIMWPVRIKSKHVGVPD*NIQPNG
Trigger: TCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAAC...ATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp TCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTGACGCTGTGTTAAAATCCCCGAAAATAAACTaGCAAGTGCAAGAGGGACAA +
Preference number: 4 (lower is better)
Translates to: SHPGMKKLKPGLTDAVLKSPKIN*QVQEGQ
Trigger: TTGTCCCTCTTGCACTTGGCAGTTTATTTTCGGGGA...TTTTAACACAGCGTCAGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp GGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCTATATGCAAGATGGGCTGCCAAGCTaGCAGCCGTTGCTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: GALTKENVHTHCYLTYMQDGLPS*QPLLFE
Trigger: TTCAAACAGCAACGGCTGCCAGCTTGGCAGCCCATC...TTGCATATAGGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR CCA 90 bp TCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCGATGGGCTGCCAAGCTaGCAGCCGTTGCTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: SLNPERLASHYTHTSCNPDGLPS*QPLLFE
Trigger: TTCAAACAGCAACGGCTGCCAGCTTGGCAGCCCATC...GGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CCA 90 bp CAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACCTCTCTGTCCAGAAGGAAGGAGATaGATCCAACAGCGATGTAAG +
Preference number: 4 (lower is better)
Translates to: QVFPVYPTSLFPSCLPLCPEGRR*IQQRCK
Trigger: CTTACATCGCTGTTGGATCCATCTCCTTCCTTCTGG...ACAGAGAGGTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CACATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATCCAGAAGGAAGGAGATaGATCCAACAGCGATGTAAG +
Preference number: 4 (lower is better)
Translates to: HMKEALCIMWPVRIKSKHPEGRR*IQQRCK
Trigger: CTTACATCGCTGTTGGATCCATCTCCTTCCTTCTGG...ATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CTGGACATTCCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGCCAGAAGGAAGGAGATaGATCCAACAGCGATGTAAG +
Preference number: 4 (lower is better)
Translates to: LDIPLDLIPNLASLTVTQPEGRR*IQQRCK
Trigger: CTTACATCGCTGTTGGATCCATCTCCTTCCTTCTGG...CTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGGCTCTATGCATCATGTaGCCTGTCCGAATAAAAAGC +
Preference number: 4 (lower is better)
Translates to: HSKARLNRTGLDAHADDLALCIM*PVRIKS
Trigger: GCTTTTTATTCGGACAGGCCACATGATGCATAGAGC...CAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGATGATAATCTCAATCTGGAAAGAGTaGCAGAAACCCCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: PLDLIPNLASLTVTQMIISIWKE*QKPLSP
Trigger: GGGGGAGAGGGGTTTCTGCCACTCTTTCCAGATTGA...GATTATCATCTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CCCATGCTTCACAGAGACTATACGAATGTTCCATACTCTTCATATTTAGCAACATCAATCTGGAAAGAGTaGCAGAAACCCCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: PMLHRDYTNVPYSSYLATSIWKE*QKPLSP
Trigger: GGGGGAGAGGGGTTTCTGCCACTCTTTCCAGATTGA...TGTTGCTAAATATGAAGAGTATGGAACATTCGTATAGTCTCTGTGAAGCATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CTGGACATTCCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGAGCACAGACTCAATCTaGAAAGAGTGGCAGAAACCC +
Preference number: 4 (lower is better)
Translates to: LDIPLDLIPNLASLTVTQSTDSI*KEWQKP
Trigger: GGGTTTCTGCCACTCTTTCCAGATTGAGTCTGTGCT...CTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp TATAAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGGGATGTTGTTGGAGGTaGCAAAAATGCCAATGCCGA +
Preference number: 4 (lower is better)
Translates to: YKNIPSELGFLTATFNQTGCCWR*QKCQCR
Trigger: TCGGCATTGGCATTTTTGTCACCTCCAACAACATCC...CGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR TCA 90 bp GGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTAGAATGCCATCACGTTGCCCTCAAATaGCTTTTCCAGTGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: GSMHHVACPNKKQTLECHHVALK*LFQCEV
Trigger: AACTTCACACTGGAAAAGTCATTTGAGGGCAACGTG...ATGGCATTCTAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp GGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTAGAATGCCATATTCGAAAGCTAGGTTaGATAGGACTGGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: GSMHHVACPNKKQTLECHIRKLG*IGLALM
Trigger: CATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAAT...ATGGCATTCTAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CTGGACATTCCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGATTCGAAAGCTAGGTTaGATAGGACTGGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: LDIPLDLIPNLASLTVTQIRKLG*IGLALM
Trigger: CATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAAT...CTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp TCCTCCTCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATATTCGAAAGCTAGGTTaGATAGGACTGGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: SSSLVRFFLCTPLHYFHHIRKLG*IGLALM
Trigger: CATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAAT...ATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGAGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCAGAATAAAAACAGCCTaGGTATTTCCAAAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LLSRTYPTTADMSINSYARIKTA*VFPKLK
Trigger: CTTCAGCTTTGGAAATACTCAGGCTGTTTTTATTCT...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCTTTGAAAGGAGACTATaGCATTTGAGCATAAAGCCT +
Preference number: 4 (lower is better)
Translates to: LLSRTYPTTADMSINSYAFERRL*HLSIKP
Trigger: AGGCTTTATGCTCAAATGTCATAGTCTCCTTTCAAA...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACCTCTCTGTAAGGTAATGGCACTTTaGCCCTGTCAATTCACTCAG +
Preference number: 4 (lower is better)
Translates to: QVFPVYPTSLFPSCLPLCKVMAL*PCQFTQ
Trigger: CTGAGTGAATTGACAGGGTCAAAGTGCCATTACCTT...ACAGAGAGGTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674151.1
CDS-3UTR GCA 90 bp ATGAATTACATTTTATCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTCAAGCTGGCAGCCGTTaGTGTTTGAAGGCCGTGTTA +
Preference number: 4 (lower is better)
Translates to: MNYILSHPGMKKLKPGLTQAGSR*CLKAVL
Trigger: TAACACGGCCTTCAAACAGCAACGGCTGCCAGCTTG...AGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGATAAAATGTAATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR GCA 90 bp ATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATATGAAAGAGGCTCTATaGATCATGTGGCCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: ILTRYQHSKARLNRTGLDMKEAL*IMWPVR
Trigger: TCGGACAGGCCACATGATGCATAGAGCCTCTTTCAT...ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp CACATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTCCCCGAAAATAAACTaGCAAGTGCAAGAGGGACAA +
Preference number: 4 (lower is better)
Translates to: HMKEALCIMWPVRIKSKHSPKIN*QVQEGQ
Trigger: TTGTCCCTCTTGCACTTGGCAGTTTATTTTCGGGGA...ATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp GGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTAGAATGCCATTCCCCGAAAATAAACTaGCAAGTGCAAGAGGGACAA +
Preference number: 4 (lower is better)
Translates to: GSMHHVACPNKKQTLECHSPKIN*QVQEGQ
Trigger: TTGTCCCTCTTGCACTTGGCAGTTTATTTTCGGGGA...ATGGCATTCTAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp TCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCACCCTATCTCTCAGCTaGTCCTCCTCACTAGTCAGG +
Preference number: 4 (lower is better)
Translates to: SLNPERLASHYTHTSCNPTLSLS*SSSLVR
Trigger: CCTGACTAGTGAGGAGGAGCAGCTGAGAGATAGGGT...GGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp GAGTTCCTTAGAGATCAAACAGCAGAAAACAGGAGGAACTTAGGCCATCAATGGATTTATTACAGGGACTaGAAGGCTCTGTTCCGGTAT +
Preference number: 4 (lower is better)
Translates to: EFLRDQTAENRRNLGHQWIYYRD*KALFRY
Trigger: ATACCGGAACAGAGCCTTCCAGTCCCTGTAATAAAT...CCATTGATGGCCTAAGTTCCTCCTGTTTTCTGCTGTTTGATCTCTAAGGAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCAATTTATTACAGGGACTaGAAGGCTCTGTTCCGGTAT +
Preference number: 4 (lower is better)
Translates to: LTRYQHSKARLNRTGLDAIYYRD*KALFRY
Trigger: ATACCGGAACAGAGCCTTCCAGTCCCTGTAATAAAT...TGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGATCCAGCATGTAAACTaGTTTAAGCCAGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: HSKARLNRTGLDAHADDLIQHVN*FKPVHR
Trigger: CCTGTGAACTGGCTTAAACCAGTTTACATGCTGGAT...CAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp AATGACATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCCAGAAGGAAGGAGATaGATCCAACAGCGATGTAAG +
Preference number: 4 (lower is better)
Translates to: NDILTRYQHSKARLNRTGPEGRR*IQQRCK
Trigger: CTTACATCGCTGTTGGATCCATCTCCTTCCTTCTGG...GCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTATGTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp TCCTCCTCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTCTATGCATCATGTaGCCTGTCCGAATAAAAAGC +
Preference number: 4 (lower is better)
Translates to: SSSLVRFFLCTPLHYFHHALCIM*PVRIKS
Trigger: GCTTTTTATTCGGACAGGCCACATGATGCATAGAGC...ATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGAGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCTTAAGCACTTACATGTaGTTTACAGTTGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LLSRTYPTTADMSINSYALSTYM*FTVEAE
Trigger: TTCTGCCTCAACTGTAAACCACATGTAAGTGCTTAA...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp ATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATAGCACAGACTCAATCTaGAAAGAGTGGCAGAAACCC +
Preference number: 4 (lower is better)
Translates to: ILTRYQHSKARLNRTGLDSTDSI*KEWQKP
Trigger: GGGTTTCTGCCACTCTTTCCAGATTGAGTCTGTGCT...ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp ATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATTTCTTCTCCCAACAATaGCCAAGGTGTCCATCTCTG +
Preference number: 4 (lower is better)
Translates to: ILTRYQHSKARLNRTGLDFFSQQ*PRCPSL
Trigger: CAGAGATGGACACCTTGGCCATTGTTGGGAGAAGAA...ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674151.1
3UTR CAA 72 bp GACATACTAACCAGATATCAGCATTCGAAAGCTAGGTaGAATAGGACTGGCCTTGATGCACATGCAGATGAT +
Preference number: 4 (lower is better)
Translates to: DILTRYQHSKAR*NRTGLDAHADD
Trigger: ATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp TCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGCTTCTCCAGGGGGATTTCTaGATTTCACATTTTTATCTG +
Preference number: 4 (lower is better)
Translates to: SKARLNRTGLDAHADDLLLQGDF*ISHFYL
Trigger: CAGATAAAAATGTGAAATTCAGAAATCCCCCTGGAG...AAGCAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CACATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATCAGGGTAATTGTATGTaGCATTCAAAGAGTATCGGC +
Preference number: 4 (lower is better)
Translates to: HMKEALCIMWPVRIKSKHQGNCM*HSKSIG
Trigger: GCCGATACTCTTTGAATGTCACATACAATTACCCTG...ATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp GGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTAGAATGCCATCAGGGTAATTGTATGTaGCATTCAAAGAGTATCGGC +
Preference number: 4 (lower is better)
Translates to: GSMHHVACPNKKQTLECHQGNCM*HSKSIG
Trigger: GCCGATACTCTTTGAATGTCACATACAATTACCCTG...ATGGCATTCTAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp TCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGCTTTTTTCCTCCCATCCATaGAATAGTGCTCAAGATCAT +
Preference number: 4 (lower is better)
Translates to: SKARLNRTGLDAHADDLLFSSHP*NSAQDH
Trigger: ATGATCTTGAGCACTATTTCATGGATGGGAGGAAAA...AAGCAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCATTTTCCTCCCATCCATaGAATAGTGCTCAAGATCAT +
Preference number: 4 (lower is better)
Translates to: LTRYQHSKARLNRTGLDAFSSHP*NSAQDH
Trigger: ATGATCTTGAGCACTATTTCATGGATGGGAGGAAAA...TGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp AGGATGGTAGTCCTCCTTAAACAGCACAGACTCAATCTGGAAAGAGTGGCAGAATCTTTCTCTGAATCCTaGAAGGTTAGCAAGTCATTA +
Preference number: 4 (lower is better)
Translates to: RMVVLLKQHRLNLERVAESFSES*KVSKSL
Trigger: TAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGA...TTCTGCCACTCTTTCCAGATTGAGTCTGTGCTGTTTAAGGAGGACTACCATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp GAGTTCCTTAGAGATCAAACAGCAGAAAACAGGAGGAACTTAGGCCATCAATGGGATAAACTGGATACATaGACCACCTCAACAAAGATG +
Preference number: 4 (lower is better)
Translates to: EFLRDQTAENRRNLGHQWDKLDT*TTSTKM
Trigger: CATCTTTGTTGAGGTGGTTCATGTATCCAGTTTATC...CCATTGATGGCCTAAGTTCCTCCTGTTTTCTGCTGTTTGATCTCTAAGGAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp TCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGCTTGATAAACTGGATACATaGACCACCTCAACAAAGATG +
Preference number: 4 (lower is better)
Translates to: SKARLNRTGLDAHADDLLDKLDT*TTSTKM
Trigger: CATCTTTGTTGAGGTGGTTCATGTATCCAGTTTATC...AAGCAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp GGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTAGAATGCCATCAACCACTGCAGACATaGGCATTAATTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: GSMHHVACPNKKQTLECHQPLQT*ALILMP
Trigger: TGGCATAAGAATTAATGCTCATGTCTGCAGTGGTTG...ATGGCATTCTAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp GTGCATACACATTGCTATTTGACCTATATGCAAAAGTGGAATGAAATACATAGGCAAGCTGGCAGCCGTTaGTGTTTGAAGGCCGTGTTA +
Preference number: 4 (lower is better)
Translates to: VHTHCYLTYMQKWNEIHRQAGSR*CLKAVL
Trigger: TAACACGGCCTTCAAACAGCAACGGCTGCCAGCTTG...CCTATGTATTTCATTCCACTTTTGCATATAGGTCAAATAGCAATGTGTATGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR GCA 90 bp CCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGATGATAATCATGAAAGAGGCTCTATaGATCATGTGGCCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: PLDLIPNLASLTVTQMIIMKEAL*IMWPVR
Trigger: TCGGACAGGCCACATGATGCATAGAGCCTCTTTCAT...GATTATCATCTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp CCCATGCTTCACAGAGACTATACGAATGTTCCATACTCTTCATATTTAGCAACAGTTGGGGTTCCTGACTaGAACATTCAACCAAACGGA +
Preference number: 4 (lower is better)
Translates to: PMLHRDYTNVPYSSYLATVGVPD*NIQPNG
Trigger: TCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAAC...TGTTGCTAAATATGAAGAGTATGGAACATTCGTATAGTCTCTGTGAAGCATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp CATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTATCCCCGAAAATAAACTaGCAAGTGCAAGAGGGACAA +
Preference number: 4 (lower is better)
Translates to: HERGSMHHVACPNKKQTLSPKIN*QVQEGQ
Trigger: TTGTCCCTCTTGCACTTGGCAGTTTATTTTCGGGGA...TAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp ATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATTCCCCGAAAATAAACTaGCAAGTGCAAGAGGGACAA +
Preference number: 4 (lower is better)
Translates to: ILTRYQHSKARLNRTGLDSPKIN*QVQEGQ
Trigger: TTGTCCCTCTTGCACTTGGCAGTTTATTTTCGGGGA...ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp GGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTAGAATGCCATATTTATTACAGGGACTaGAAGGCTCTGTTCCGGTAT +
Preference number: 4 (lower is better)
Translates to: GSMHHVACPNKKQTLECHIYYRD*KALFRY
Trigger: ATACCGGAACAGAGCCTTCCAGTCCCTGTAATAAAT...ATGGCATTCTAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACCTCTCTGTATCCAGCATGTAAACTaGTTTAAGCCAGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: QVFPVYPTSLFPSCLPLCIQHVN*FKPVHR
Trigger: CCTGTGAACTGGCTTAAACCAGTTTACATGCTGGAT...ACAGAGAGGTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CACATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATATCCAGCATGTAAACTaGTTTAAGCCAGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: HMKEALCIMWPVRIKSKHIQHVN*FKPVHR
Trigger: CCTGTGAACTGGCTTAAACCAGTTTACATGCTGGAT...ATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp AGGATGGTAGTCCTCCTTAAACAGCACAGACTCAATCTGGAAAGAGTGGCAGAAGAATCCATTATTATCTaGGTCAGAATCCAGCATGTA +
Preference number: 4 (lower is better)
Translates to: RMVVLLKQHRLNLERVAEESIII*VRIQHV
Trigger: TACATGCTGGATTCTGACCCAGATAATAATGGATTC...TTCTGCCACTCTTTCCAGATTGAGTCTGTGCTGTTTAAGGAGGACTACCATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CCCATGCTTCACAGAGACTATACGAATGTTCCATACTCTTCATATTTAGCAACACCAGAAGGAAGGAGATaGATCCAACAGCGATGTAAG +
Preference number: 4 (lower is better)
Translates to: PMLHRDYTNVPYSSYLATPEGRR*IQQRCK
Trigger: CTTACATCGCTGTTGGATCCATCTCCTTCCTTCTGG...TGTTGCTAAATATGAAGAGTATGGAACATTCGTATAGTCTCTGTGAAGCATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTAGCTCTATGCATCATGTaGCCTGTCCGAATAAAAAGC +
Preference number: 4 (lower is better)
Translates to: HERGSMHHVACPNKKQTLALCIM*PVRIKS
Trigger: GCTTTTTATTCGGACAGGCCACATGATGCATAGAGC...TAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp ATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCTCTATGCATCATGTaGCCTGTCCGAATAAAAAGC +
Preference number: 4 (lower is better)
Translates to: ILTRYQHSKARLNRTGLDALCIM*PVRIKS
Trigger: GCTTTTTATTCGGACAGGCCACATGATGCATAGAGC...ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp GAGTTCCTTAGAGATCAAACAGCAGAAAACAGGAGGAACTTAGGCCATCAATGGCTGTACTGGATAAACTaGATACATGAACCACCTCAA +
Preference number: 4 (lower is better)
Translates to: EFLRDQTAENRRNLGHQWLYWIN*IHEPPQ
Trigger: TTGAGGTGGTTCATGTATCCAGTTTATCCAGTACAG...CCATTGATGGCCTAAGTTCCTCCTGTTTTCTGCTGTTTGATCTCTAAGGAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp GTGCATACACATTGCTATTTGACCTATATGCAAAAGTGGAATGAAATACATAGGTCAATCTGGAAAGAGTaGCAGAAACCCCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: VHTHCYLTYMQKWNEIHRSIWKE*QKPLSP
Trigger: GGGGGAGAGGGGTTTCTGCCACTCTTTCCAGATTGA...CCTATGTATTTCATTCCACTTTTGCATATAGGTCAAATAGCAATGTGTATGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CACATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATAACCAAAGGGAGAGATaGGTTCTTCCTCTCCATAAA +
Preference number: 4 (lower is better)
Translates to: HMKEALCIMWPVRIKSKHNQRER*VLPLHK
Trigger: TTTATGGAGAGGAAGAACCCATCTCTCCCTTTGGTT...ATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370050.9
CDS-3UTR CCA 90 bp GGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCTATATGCAATCCAGCTCCAGCCAATaGATGCAGGATACGACAGTA +
Preference number: 4 (lower is better)
Translates to: GALTKENVHTHCYLTYMQSSSSQ*MQDTTV
Trigger: TACTGTCGTATCCTGCATCCATTGGCTGGAGCTGGA...TTGCATATAGGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370050.9
3UTR CAA 72 bp ACAGGCTTTGTTGTACCTTTAAATCGTTCTTCCAGGTaGTCTCCTCCAGGGGGATTTCTGAATTTCACATTT +
Preference number: 4 (lower is better)
Translates to: TGFVVPLNRSSR*SPPGGFLNFTF
Trigger: AAATGTGAAATTCAGAAATCCCCCTGGAGGAGACAACCTGGAAGAACGATTTAAAGGTACAACAAAGCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
CDS-3UTR TCA 90 bp TCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGCTTGAATCTCCATTTAGTTaGCTATCATCTCGAGATTTC +
Preference number: 4 (lower is better)
Translates to: SKARLNRTGLDAHADDLLESPFS*LSSRDF
Trigger: GAAATCTCGAGATGATAGTCAACTAAATGGAGATTC...AAGCAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CACATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATCTCCAGGGGGATTTCTaGATTTCACATTTTTATCTG +
Preference number: 4 (lower is better)
Translates to: HMKEALCIMWPVRIKSKHLQGDF*ISHFYL
Trigger: CAGATAAAAATGTGAAATTCAGAAATCCCCCTGGAG...ATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp TATAAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGCAGGGTAATTGTATGTaGCATTCAAAGAGTATCGGC +
Preference number: 4 (lower is better)
Translates to: YKNIPSELGFLTATFNQTQGNCM*HSKSIG
Trigger: GCCGATACTCTTTGAATGTCACATACAATTACCCTG...CGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTACAGGGTAATTGTATGTaGCATTCAAAGAGTATCGGC +
Preference number: 4 (lower is better)
Translates to: HERGSMHHVACPNKKQTLQGNCM*HSKSIG
Trigger: GCCGATACTCTTTGAATGTCACATACAATTACCCTG...TAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp AATGACATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCAGGGTAATTGTATGTaGCATTCAAAGAGTATCGGC +
Preference number: 4 (lower is better)
Translates to: NDILTRYQHSKARLNRTGQGNCM*HSKSIG
Trigger: GCCGATACTCTTTGAATGTCACATACAATTACCCTG...GCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTATGTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CACATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTTTTCCTCCCATCCATaGAATAGTGCTCAAGATCAT +
Preference number: 4 (lower is better)
Translates to: HMKEALCIMWPVRIKSKHFSSHP*NSAQDH
Trigger: ATGATCTTGAGCACTATTTCATGGATGGGAGGAAAA...ATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCATCTTTCTCTGAATCCTaGAAGGTTAGCAAGTCATTA +
Preference number: 4 (lower is better)
Translates to: LTRYQHSKARLNRTGLDASFSES*KVSKSL
Trigger: TAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGA...TGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp GGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTAGAATGCCATGATAAACTGGATACATaGACCACCTCAACAAAGATG +
Preference number: 4 (lower is better)
Translates to: GSMHHVACPNKKQTLECHDKLDT*TTSTKM
Trigger: CATCTTTGTTGAGGTGGTTCATGTATCCAGTTTATC...ATGGCATTCTAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp ATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATCAACCACTGCAGACATaGGCATTAATTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: ILTRYQHSKARLNRTGLDQPLQT*ALILMP
Trigger: TGGCATAAGAATTAATGCTCATGTCTGCAGTGGTTG...ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp TATAAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGCAGATGAGAAAGTGCTaGAAGGGCTCTTCAACTTTT +
Preference number: 4 (lower is better)
Translates to: YKNIPSELGFLTATFNQTQMRKC*KGSSTF
Trigger: AAAAGTTGAAGAGCCCTTTCAGCACTTTCTCATCTG...CGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp TCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACCAGATGAGAAAGTGCTaGAAGGGCTCTTCAACTTTT +
Preference number: 4 (lower is better)
Translates to: SLVRFFLCTPLHYFHHAYQMRKC*KGSSTF
Trigger: AAAAGTTGAAGAGCCCTTTCAGCACTTTCTCATCTG...GTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp TCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGCTTCAAACGATATTCACTTaGCTCTTCTCTTGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: SKARLNRTGLDAHADDLLQTIFT*LFSWLN
Trigger: ATTCAACCAAGAGAAGAGTCAAGTGAATATCGTTTG...AAGCAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp TATAAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGACTGGACATTCCCCTTaGTCTAATACCAAACTTAGC +
Preference number: 4 (lower is better)
Translates to: YKNIPSELGFLTATFNQTTGHSP*SNTKLS
Trigger: GCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAGT...CGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp TCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCGTTGGGGTTCCTGACTaGAACATTCAACCAAACGGA +
Preference number: 4 (lower is better)
Translates to: SLNPERLASHYTHTSCNPVGVPD*NIQPNG
Trigger: TCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAAC...GGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp ATGAATTACATTTTATCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTGTTGGGGTTCCTGACTaGAACATTCAACCAAACGGA +
Preference number: 4 (lower is better)
Translates to: MNYILSHPGMKKLKPGLTVGVPD*NIQPNG
Trigger: TCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAAC...AGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGATAAAATGTAATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp GGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCTATATGCAAGTTGGGGTTCCTGACTaGAACATTCAACCAAACGGA +
Preference number: 4 (lower is better)
Translates to: GALTKENVHTHCYLTYMQVGVPD*NIQPNG
Trigger: TCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAAC...TTGCATATAGGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp ATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATATTTATTACAGGGACTaGAAGGCTCTGTTCCGGTAT +
Preference number: 4 (lower is better)
Translates to: ILTRYQHSKARLNRTGLDIYYRD*KALFRY
Trigger: ATACCGGAACAGAGCCTTCCAGTCCCTGTAATAAAT...ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp AATGACATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCATCCAGCATGTAAACTaGTTTAAGCCAGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: NDILTRYQHSKARLNRTGIQHVN*FKPVHR
Trigger: CCTGTGAACTGGCTTAAACCAGTTTACATGCTGGAT...GCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTATGTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp ATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATATCCAGCATGTAAACTaGTTTAAGCCAGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: ILTRYQHSKARLNRTGLDIQHVN*FKPVHR
Trigger: CCTGTGAACTGGCTTAAACCAGTTTACATGCTGGAT...ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTAATCCAGCATGTAAACTaGTTTAAGCCAGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: HERGSMHHVACPNKKQTLIQHVN*FKPVHR
Trigger: CCTGTGAACTGGCTTAAACCAGTTTACATGCTGGAT...TAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCAGAATCCATTATTATCTaGGTCAGAATCCAGCATGTA +
Preference number: 4 (lower is better)
Translates to: LTRYQHSKARLNRTGLDAESIII*VRIQHV
Trigger: TACATGCTGGATTCTGACCCAGATAATAATGGATTC...TGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGGAATCCATTATTATCTaGGTCAGAATCCAGCATGTA +
Preference number: 4 (lower is better)
Translates to: HSKARLNRTGLDAHADDLESIII*VRIQHV
Trigger: TACATGCTGGATTCTGACCCAGATAATAATGGATTC...CAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp GGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCTATATGCAACCAGAAGGAAGGAGATaGATCCAACAGCGATGTAAG +
Preference number: 4 (lower is better)
Translates to: GALTKENVHTHCYLTYMQPEGRR*IQQRCK
Trigger: CTTACATCGCTGTTGGATCCATCTCCTTCCTTCTGG...TTGCATATAGGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGATGATAATCGCTCTATGCATCATGTaGCCTGTCCGAATAAAAAGC +
Preference number: 4 (lower is better)
Translates to: PLDLIPNLASLTVTQMIIALCIM*PVRIKS
Trigger: GCTTTTTATTCGGACAGGCCACATGATGCATAGAGC...GATTATCATCTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp TCCTCCTCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATCTGTACTGGATAAACTaGATACATGAACCACCTCAA +
Preference number: 4 (lower is better)
Translates to: SSSLVRFFLCTPLHYFHHLYWIN*IHEPPQ
Trigger: TTGAGGTGGTTCATGTATCCAGTTTATCCAGTACAG...ATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGAGGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp TCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGCTTTTAAGCACTTACATGTaGTTTACAGTTGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: SKARLNRTGLDAHADDLLLSTYM*FTVEAE
Trigger: TTCTGCCTCAACTGTAAACCACATGTAAGTGCTTAA...AAGCAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp TCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCAGCACAGACTCAATCTaGAAAGAGTGGCAGAAACCC +
Preference number: 4 (lower is better)
Translates to: SLNPERLASHYTHTSCNPSTDSI*KEWQKP
Trigger: GGGTTTCTGCCACTCTTTCCAGATTGAGTCTGTGCT...GGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CAGTCTCCATTAAGCACTTACATGTGGTTTACAGTTGAGGCAGAAGATGAAGGTTACCCTGGCAATTGCTaGAATTGTTTCCAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: QSPLSTYMWFTVEAEDEGYPGNC*NCFQVL
Trigger: CAAAACTTGGAAACAATTCCAGCAATTGCCAGGGTA...ACCTTCATCTTCTGCCTCAACTGTAAACCACATGTAAGTGCTTAATGGAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370050.9
CDS-3UTR TCA 90 bp CATCTTTCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTGGATGTTGTTGGAGGTaGCAAAAATGCCAATGCCGA +
Preference number: 4 (lower is better)
Translates to: HLSLNPERLASHYTHTSCGCCWR*QKCQCR
Trigger: TCGGCATTGGCATTTTTGTCACCTCCAACAACATCC...ACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR TCA 90 bp TCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCCACGTTGCCCTCAAATaGCTTTTCCAGTGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: SLNPERLASHYTHTSCNPHVALK*LFQCEV
Trigger: AACTTCACACTGGAAAAGTCATTTGAGGGCAACGTG...GGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp AGTGCTCAAGATCATCCGTTTTCGTCCATCAAAATAATGTACAGGGTAATTGTACACGTTGCCCTCAAATaGCTTTTCCAGTGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: SAQDHPFSSIKIMYRVIVHVALK*LFQCEV
Trigger: AACTTCACACTGGAAAAGTCATTTGAGGGCAACGTG...TACAATTACCCTGTACATTATTTTGATGGACGAAAACGGATGATCTTGAGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
CDS-3UTR TCA 90 bp CAGTCTCCATTAAGCACTTACATGTGGTTTACAGTTGAGGCAGAAGATGAAGGTGAATCTCCATTTAGTTaGCTATCATCTCGAGATTTC +
Preference number: 4 (lower is better)
Translates to: QSPLSTYMWFTVEAEDEGESPFS*LSSRDF
Trigger: GAAATCTCGAGATGATAGTCAACTAAATGGAGATTC...ACCTTCATCTTCTGCCTCAACTGTAAACCACATGTAAGTGCTTAATGGAGACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTACTCCAGGGGGATTTCTaGATTTCACATTTTTATCTG +
Preference number: 4 (lower is better)
Translates to: HERGSMHHVACPNKKQTLLQGDF*ISHFYL
Trigger: CAGATAAAAATGTGAAATTCAGAAATCCCCCTGGAG...TAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp TCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACCTCCAGGGGGATTTCTaGATTTCACATTTTTATCTG +
Preference number: 4 (lower is better)
Translates to: SLVRFFLCTPLHYFHHAYLQGDF*ISHFYL
Trigger: CAGATAAAAATGTGAAATTCAGAAATCCCCCTGGAG...GTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp TATGTGACATTCAAAGAGTATCGGCCAGCTGGTAATGTTGGATGTAAATCACTTCAGGGTAATTGTATGTaGCATTCAAAGAGTATCGGC +
Preference number: 4 (lower is better)
Translates to: YVTFKEYRPAGNVGCKSLQGNCM*HSKSIG
Trigger: GCCGATACTCTTTGAATGTCACATACAATTACCCTG...AAGTGATTTACATCCAACATTACCAGCTGGCCGATACTCTTTGAATGTCACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
CDS-3UTR TCA 90 bp TCCTCCTCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATTCTTTCTCTGAATCCTaGAAGGTTAGCAAGTCATTA +
Preference number: 4 (lower is better)
Translates to: SSSLVRFFLCTPLHYFHHSFSES*KVSKSL
Trigger: TAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGA...ATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGAGGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGATGATAATCCAGATGAGAAAGTGCTaGAAGGGCTCTTCAACTTTT +
Preference number: 4 (lower is better)
Translates to: PLDLIPNLASLTVTQMIIQMRKC*KGSSTF
Trigger: AAAAGTTGAAGAGCCCTTTCAGCACTTTCTCATCTG...GATTATCATCTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp GGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTAGAATGCCATTTTGAAAGGAGACTATaGCATTTGAGCATAAAGCCT +
Preference number: 4 (lower is better)
Translates to: GSMHHVACPNKKQTLECHFERRL*HLSIKP
Trigger: AGGCTTTATGCTCAAATGTCATAGTCTCCTTTCAAA...ATGGCATTCTAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACCTCTCTGTTTTGAAAGGAGACTATaGCATTTGAGCATAAAGCCT +
Preference number: 4 (lower is better)
Translates to: QVFPVYPTSLFPSCLPLCFERRL*HLSIKP
Trigger: AGGCTTTATGCTCAAATGTCATAGTCTCCTTTCAAA...ACAGAGAGGTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp GGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTAGAATGCCATCAAACGATATTCACTTaGCTCTTCTCTTGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: GSMHHVACPNKKQTLECHQTIFT*LFSWLN
Trigger: ATTCAACCAAGAGAAGAGTCAAGTGAATATCGTTTG...ATGGCATTCTAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CATCTTTCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTCCTCTGTCTCTATGCTaGCTTTTCTTCATGGCACTG +
Preference number: 4 (lower is better)
Translates to: HLSLNPERLASHYTHTSCPLSLC*LFFMAL
Trigger: CAGTGCCATGAAGAAAAGTCAGCATAGAGACAGAGG...ACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370050.9
CDS-3UTR GCA 90 bp AATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCTTTCTCATGAAAGAGGCTCTATaGATCATGTGGCCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: NPERLASHYTHTSCNPFLMKEAL*IMWPVR
Trigger: TCGGACAGGCCACATGATGCATAGAGCCTCTTTCAT...GAGAAAGGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp AAAACAATTGGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCATGAAAGAGGCTCTATaGATCATGTGGCCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: KTIGALTKENVHTHCYLTMKEAL*IMWPVR
Trigger: TCGGACAGGCCACATGATGCATAGAGCCTCTTTCAT...GGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACCAATTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp AATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCTTTCTCGTTGGGGTTCCTGACTaGAACATTCAACCAAACGGA +
Preference number: 4 (lower is better)
Translates to: NPERLASHYTHTSCNPFLVGVPD*NIQPNG
Trigger: TCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAAC...GAGAAAGGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp AGTGCTCAAGATCATCCGTTTTCGTCCATCAAAATAATGTACAGGGTAATTGTATCCCCGAAAATAAACTaGCAAGTGCAAGAGGGACAA +
Preference number: 4 (lower is better)
Translates to: SAQDHPFSSIKIMYRVIVSPKIN*QVQEGQ
Trigger: TTGTCCCTCTTGCACTTGGCAGTTTATTTTCGGGGA...TACAATTACCCTGTACATTATTTTGATGGACGAAAACGGATGATCTTGAGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
CDS-3UTR GCA 90 bp TCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTGACGCTGTGTTAAAATCATTATTTCCATCATaGTTACCTCTCTGTTTACTG +
Preference number: 4 (lower is better)
Translates to: SHPGMKKLKPGLTDAVLKSLFPS*LPLCLL
Trigger: CAGTAAACAGAGAGGTAAGCATGATGGAAATAATGA...TTTTAACACAGCGTCAGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp TCCTCCTCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGAATCCATTATTATCTaGGTCAGAATCCAGCATGTA +
Preference number: 4 (lower is better)
Translates to: SSSLVRFFLCTPLHYFHHESIII*VRIQHV
Trigger: TACATGCTGGATTCTGACCCAGATAATAATGGATTC...ATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGAGGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp GTGCATACACATTGCTATTTGACCTATATGCAAAAGTGGAATGAAATACATAGGCCAGAAGGAAGGAGATaGATCCAACAGCGATGTAAG +
Preference number: 4 (lower is better)
Translates to: VHTHCYLTYMQKWNEIHRPEGRR*IQQRCK
Trigger: CTTACATCGCTGTTGGATCCATCTCCTTCCTTCTGG...CCTATGTATTTCATTCCACTTTTGCATATAGGTCAAATAGCAATGTGTATGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp AATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCTTTCTCCCAGAAGGAAGGAGATaGATCCAACAGCGATGTAAG +
Preference number: 4 (lower is better)
Translates to: NPERLASHYTHTSCNPFLPEGRR*IQQRCK
Trigger: CTTACATCGCTGTTGGATCCATCTCCTTCCTTCTGG...GAGAAAGGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp GGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCTATATGCAAGCTCTATGCATCATGTaGCCTGTCCGAATAAAAAGC +
Preference number: 4 (lower is better)
Translates to: GALTKENVHTHCYLTYMQALCIM*PVRIKS
Trigger: GCTTTTTATTCGGACAGGCCACATGATGCATAGAGC...TTGCATATAGGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp ATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATCTGTACTGGATAAACTaGATACATGAACCACCTCAA +
Preference number: 4 (lower is better)
Translates to: ILTRYQHSKARLNRTGLDLYWIN*IHEPPQ
Trigger: TTGAGGTGGTTCATGTATCCAGTTTATCCAGTACAG...ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp TCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACCTGTACTGGATAAACTaGATACATGAACCACCTCAA +
Preference number: 4 (lower is better)
Translates to: SLVRFFLCTPLHYFHHAYLYWIN*IHEPPQ
Trigger: TTGAGGTGGTTCATGTATCCAGTTTATCCAGTACAG...GTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp GGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTAGAATGCCATTTAAGCACTTACATGTaGTTTACAGTTGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: GSMHHVACPNKKQTLECHLSTYM*FTVEAE
Trigger: TTCTGCCTCAACTGTAAACCACATGTAAGTGCTTAA...ATGGCATTCTAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CAGTCTCCATTAAGCACTTACATGTGGTTTACAGTTGAGGCAGAAGATGAAGGTTTAAGCACTTACATGTaGTTTACAGTTGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: QSPLSTYMWFTVEAEDEGLSTYM*FTVEAE
Trigger: TTCTGCCTCAACTGTAAACCACATGTAAGTGCTTAA...ACCTTCATCTTCTGCCTCAACTGTAAACCACATGTAAGTGCTTAATGGAGACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CTGGACATTCCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGGTCTTCTACTTAAGCTaGGTGCATTTAAAATGCAAC +
Preference number: 4 (lower is better)
Translates to: LDIPLDLIPNLASLTVTQVFYLS*VHLKCN
Trigger: GTTGCATTTTAAATGCACCCAGCTTAAGTAGAAGAC...CTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp ATGAATTACATTTTATCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTCAATCTCTACGACTCTaGTTCTTCTCCCAACAATGG +
Preference number: 4 (lower is better)
Translates to: MNYILSHPGMKKLKPGLTQSLRL*FFSQQW
Trigger: CCATTGTTGGGAGAAGAACCAGAGTCGTAGAGATTG...AGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGATAAAATGTAATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674151.1
CDS-3UTR TCA 90 bp GGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCTATATGCAACAGGGTAATTGTATGTaGCATTCAAAGAGTATCGGC +
Preference number: 4 (lower is better)
Translates to: GALTKENVHTHCYLTYMQQGNCM*HSKSIG
Trigger: GCCGATACTCTTTGAATGTCACATACAATTACCCTG...TTGCATATAGGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp ATGAATTACATTTTATCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTCAGGGTAATTGTATGTaGCATTCAAAGAGTATCGGC +
Preference number: 4 (lower is better)
Translates to: MNYILSHPGMKKLKPGLTQGNCM*HSKSIG
Trigger: GCCGATACTCTTTGAATGTCACATACAATTACCCTG...AGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGATAAAATGTAATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp ATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATTCTTTCTCTGAATCCTaGAAGGTTAGCAAGTCATTA +
Preference number: 4 (lower is better)
Translates to: ILTRYQHSKARLNRTGLDSFSES*KVSKSL
Trigger: TAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGA...ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp ATGAATTACATTTTATCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTCAACCACTGCAGACATaGGCATTAATTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: MNYILSHPGMKKLKPGLTQPLQT*ALILMP
Trigger: TGGCATAAGAATTAATGCTCATGTCTGCAGTGGTTG...AGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGATAAAATGTAATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp AGTGCTCAAGATCATCCGTTTTCGTCCATCAAAATAATGTACAGGGTAATTGTACAACCACTGCAGACATaGGCATTAATTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: SAQDHPFSSIKIMYRVIVQPLQT*ALILMP
Trigger: TGGCATAAGAATTAATGCTCATGTCTGCAGTGGTTG...TACAATTACCCTGTACATTATTTTGATGGACGAAAACGGATGATCTTGAGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
CDS-3UTR TCA 90 bp ATGAATTACATTTTATCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTCAGATGAGAAAGTGCTaGAAGGGCTCTTCAACTTTT +
Preference number: 4 (lower is better)
Translates to: MNYILSHPGMKKLKPGLTQMRKC*KGSSTF
Trigger: AAAAGTTGAAGAGCCCTTTCAGCACTTTCTCATCTG...AGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGATAAAATGTAATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp TCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACTTTGAAAGGAGACTATaGCATTTGAGCATAAAGCCT +
Preference number: 4 (lower is better)
Translates to: SLVRFFLCTPLHYFHHAYFERRL*HLSIKP
Trigger: AGGCTTTATGCTCAAATGTCATAGTCTCCTTTCAAA...GTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp AATGACATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCAAACGATATTCACTTaGCTCTTCTCTTGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: NDILTRYQHSKARLNRTGQTIFT*LFSWLN
Trigger: ATTCAACCAAGAGAAGAGTCAAGTGAATATCGTTTG...GCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTATGTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTACAAACGATATTCACTTaGCTCTTCTCTTGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: HERGSMHHVACPNKKQTLQTIFT*LFSWLN
Trigger: ATTCAACCAAGAGAAGAGTCAAGTGAATATCGTTTG...TAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp ATGAATTACATTTTATCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTACTGGACATTCCCCTTaGTCTAATACCAAACTTAGC +
Preference number: 4 (lower is better)
Translates to: MNYILSHPGMKKLKPGLTTGHSP*SNTKLS
Trigger: GCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAGT...AGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGATAAAATGTAATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp AAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGGAATCATTATTTCCATCATaGTTACCTCTCTGTTTACTG +
Preference number: 4 (lower is better)
Translates to: KNIPSELGFLTATFNQTESLFPS*LPLCLL
Trigger: CAGTAAACAGAGAGGTAAGCATGATGGAAATAATGA...TTCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp TCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCATTTATTACAGGGACTaGAAGGCTCTGTTCCGGTAT +
Preference number: 4 (lower is better)
Translates to: SLNPERLASHYTHTSCNPIYYRD*KALFRY
Trigger: ATACCGGAACAGAGCCTTCCAGTCCCTGTAATAAAT...GGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp TATAAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGGAATCCATTATTATCTaGGTCAGAATCCAGCATGTA +
Preference number: 4 (lower is better)
Translates to: YKNIPSELGFLTATFNQTESIII*VRIQHV
Trigger: TACATGCTGGATTCTGACCCAGATAATAATGGATTC...CGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp AATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCTTTCTCGCTCTATGCATCATGTaGCCTGTCCGAATAAAAAGC +
Preference number: 4 (lower is better)
Translates to: NPERLASHYTHTSCNPFLALCIM*PVRIKS
Trigger: GCTTTTTATTCGGACAGGCCACATGATGCATAGAGC...GAGAAAGGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CCCATGCTTCACAGAGACTATACGAATGTTCCATACTCTTCATATTTAGCAACACTGTACTGGATAAACTaGATACATGAACCACCTCAA +
Preference number: 4 (lower is better)
Translates to: PMLHRDYTNVPYSSYLATLYWIN*IHEPPQ
Trigger: TTGAGGTGGTTCATGTATCCAGTTTATCCAGTACAG...TGTTGCTAAATATGAAGAGTATGGAACATTCGTATAGTCTCTGTGAAGCATGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp ATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATTTAAGCACTTACATGTaGTTTACAGTTGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: ILTRYQHSKARLNRTGLDLSTYM*FTVEAE
Trigger: TTCTGCCTCAACTGTAAACCACATGTAAGTGCTTAA...ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTATTAAGCACTTACATGTaGTTTACAGTTGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: HERGSMHHVACPNKKQTLLSTYM*FTVEAE
Trigger: TTCTGCCTCAACTGTAAACCACATGTAAGTGCTTAA...TAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp TATGTGACATTCAAAGAGTATCGGCCAGCTGGTAATGTTGGATGTAAATCACTTGAATCTCCATTTAGTTaGCTATCATCTCGAGATTTC +
Preference number: 4 (lower is better)
Translates to: YVTFKEYRPAGNVGCKSLESPFS*LSSRDF
Trigger: GAAATCTCGAGATGATAGTCAACTAAATGGAGATTC...AAGTGATTTACATCCAACATTACCAGCTGGCCGATACTCTTTGAATGTCACATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
CDS-3UTR TCA 90 bp CCCATGCTTCACAGAGACTATACGAATGTTCCATACTCTTCATATTTAGCAACAGAATCTCCATTTAGTTaGCTATCATCTCGAGATTTC +
Preference number: 4 (lower is better)
Translates to: PMLHRDYTNVPYSSYLATESPFS*LSSRDF
Trigger: GAAATCTCGAGATGATAGTCAACTAAATGGAGATTC...TGTTGCTAAATATGAAGAGTATGGAACATTCGTATAGTCTCTGTGAAGCATGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp GGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCTATATGCAACTCCAGGGGGATTTCTaGATTTCACATTTTTATCTG +
Preference number: 4 (lower is better)
Translates to: GALTKENVHTHCYLTYMQLQGDF*ISHFYL
Trigger: CAGATAAAAATGTGAAATTCAGAAATCCCCCTGGAG...TTGCATATAGGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp TCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCCTCCAGGGGGATTTCTaGATTTCACATTTTTATCTG +
Preference number: 4 (lower is better)
Translates to: SLNPERLASHYTHTSCNPLQGDF*ISHFYL
Trigger: CAGATAAAAATGTGAAATTCAGAAATCCCCCTGGAG...GGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp GGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCTATATGCAATTTTCCTCCCATCCATaGAATAGTGCTCAAGATCAT +
Preference number: 4 (lower is better)
Translates to: GALTKENVHTHCYLTYMQFSSHP*NSAQDH
Trigger: ATGATCTTGAGCACTATTTCATGGATGGGAGGAAAA...TTGCATATAGGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CATCTTTCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTCAACCACTGCAGACATaGGCATTAATTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: HLSLNPERLASHYTHTSCQPLQT*ALILMP
Trigger: TGGCATAAGAATTAATGCTCATGTCTGCAGTGGTTG...ACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp AATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCTTTCTCCAACCACTGCAGACATaGGCATTAATTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: NPERLASHYTHTSCNPFLQPLQT*ALILMP
Trigger: TGGCATAAGAATTAATGCTCATGTCTGCAGTGGTTG...GAGAAAGGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp TATAAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGTCATTATTTCCATCATaGTTACCTCTCTGTTTACTG +
Preference number: 4 (lower is better)
Translates to: YKNIPSELGFLTATFNQTSLFPS*LPLCLL
Trigger: CAGTAAACAGAGAGGTAAGCATGATGGAAATAATGA...CGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp CATCTTTCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTTCCTTTGTTCAAGTGTaGTCTCACCATTGTTCCATC +
Preference number: 4 (lower is better)
Translates to: HLSLNPERLASHYTHTSCSFVQV*SHHCSI
Trigger: GATGGAACAATGGTGAGAGCACACTTGAACAAAGGA...ACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370050.9
CDS-3UTR CCA 90 bp CATCTTTCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTATTTATTACAGGGACTaGAAGGCTCTGTTCCGGTAT +
Preference number: 4 (lower is better)
Translates to: HLSLNPERLASHYTHTSCIYYRD*KALFRY
Trigger: ATACCGGAACAGAGCCTTCCAGTCCCTGTAATAAAT...ACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp CATTCAAAGAGTATCGGCCAGCTGGTAATGTTGGATGTAAATCACTTTTCCTTTTTAAGCACTTACATGTaGTTTACAGTTGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: HSKSIGQLVMLDVNHFSFLSTYM*FTVEAE
Trigger: TTCTGCCTCAACTGTAAACCACATGTAAGTGCTTAA...AAAGGAAAAGTGATTTACATCCAACATTACCAGCTGGCCGATACTCTTTGAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
CDS-3UTR CCA 90 bp TATGTGACATTCAAAGAGTATCGGCCAGCTGGTAATGTTGGATGTAAATCACTTGTCTTCTACTTAAGCTaGGTGCATTTAAAATGCAAC +
Preference number: 4 (lower is better)
Translates to: YVTFKEYRPAGNVGCKSLVFYLS*VHLKCN
Trigger: GTTGCATTTTAAATGCACCCAGCTTAAGTAGAAGAC...AAGTGATTTACATCCAACATTACCAGCTGGCCGATACTCTTTGAATGTCACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
CDS-3UTR CCA 90 bp TATAAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGGTTCACATTCCTTACTaGGATTCTCAAATGACTTTT +
Preference number: 4 (lower is better)
Translates to: YKNIPSELGFLTATFNQTVHIPY*DSQMTF
Trigger: AAAAGTCATTTGAGAATCCCAGTAAGGAATGTGAAC...CGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674038.1
3UTR CAA 72 bp TGTAAATCACTTTTCCTTTCTATAAGACGATACAACTaGCGAAAAGTAGGTAATGCTGCAGTACGCATCCAA +
Preference number: 4 (lower is better)
Translates to: CKSLFLSIRRYN*RKVGNAAVRIQ
Trigger: TTGGATGCGTACTGCAGCATTACCTACTTTTCGCAAGTTGTATCGTCTTATAGAAAGGAAAAGTGATTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
CDS-3UTR TCA 90 bp GTGCATACACATTGCTATTTGACCTATATGCAAAAGTGGAATGAAATACATAGGCTCCAGGGGGATTTCTaGATTTCACATTTTTATCTG +
Preference number: 4 (lower is better)
Translates to: VHTHCYLTYMQKWNEIHRLQGDF*ISHFYL
Trigger: CAGATAAAAATGTGAAATTCAGAAATCCCCCTGGAG...CCTATGTATTTCATTCCACTTTTGCATATAGGTCAAATAGCAATGTGTATGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp AATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCTTTCTCTTTTCCTCCCATCCATaGAATAGTGCTCAAGATCAT +
Preference number: 4 (lower is better)
Translates to: NPERLASHYTHTSCNPFLFSSHP*NSAQDH
Trigger: ATGATCTTGAGCACTATTTCATGGATGGGAGGAAAA...GAGAAAGGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp GTGCATACACATTGCTATTTGACCTATATGCAAAAGTGGAATGAAATACATAGGTTTTCCTCCCATCCATaGAATAGTGCTCAAGATCAT +
Preference number: 4 (lower is better)
Translates to: VHTHCYLTYMQKWNEIHRFSSHP*NSAQDH
Trigger: ATGATCTTGAGCACTATTTCATGGATGGGAGGAAAA...CCTATGTATTTCATTCCACTTTTGCATATAGGTCAAATAGCAATGTGTATGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp TCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCTCTTTCTCTGAATCCTaGAAGGTTAGCAAGTCATTA +
Preference number: 4 (lower is better)
Translates to: SLNPERLASHYTHTSCNPSFSES*KVSKSL
Trigger: TAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGA...GGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CATCTTTCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTGATAAACTGGATACATaGACCACCTCAACAAAGATG +
Preference number: 4 (lower is better)
Translates to: HLSLNPERLASHYTHTSCDKLDT*TTSTKM
Trigger: CATCTTTGTTGAGGTGGTTCATGTATCCAGTTTATC...ACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp AATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCTTTCTCGATAAACTGGATACATaGACCACCTCAACAAAGATG +
Preference number: 4 (lower is better)
Translates to: NPERLASHYTHTSCNPFLDKLDT*TTSTKM
Trigger: CATCTTTGTTGAGGTGGTTCATGTATCCAGTTTATC...GAGAAAGGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp GGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCTATATGCAAAGAATAAAAACAGCCTaGGTATTTCCAAAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GALTKENVHTHCYLTYMQRIKTA*VFPKLK
Trigger: CTTCAGCTTTGGAAATACTCAGGCTGTTTTTATTCT...TTGCATATAGGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp TCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCGAATCCATTATTATCTaGGTCAGAATCCAGCATGTA +
Preference number: 4 (lower is better)
Translates to: SLNPERLASHYTHTSCNPESIII*VRIQHV
Trigger: TACATGCTGGATTCTGACCCAGATAATAATGGATTC...GGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp AATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCTTTCTCCTGTACTGGATAAACTaGATACATGAACCACCTCAA +
Preference number: 4 (lower is better)
Translates to: NPERLASHYTHTSCNPFLLYWIN*IHEPPQ
Trigger: TTGAGGTGGTTCATGTATCCAGTTTATCCAGTACAG...GAGAAAGGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp TCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCTTAAGCACTTACATGTaGTTTACAGTTGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: SLNPERLASHYTHTSCNPLSTYM*FTVEAE
Trigger: TTCTGCCTCAACTGTAAACCACATGTAAGTGCTTAA...GGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp TCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCGTCTTCTACTTAAGCTaGGTGCATTTAAAATGCAAC +
Preference number: 4 (lower is better)
Translates to: SLNPERLASHYTHTSCNPVFYLS*VHLKCN
Trigger: GTTGCATTTTAAATGCACCCAGCTTAAGTAGAAGAC...GGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp GTGCATACACATTGCTATTTGACCTATATGCAAAAGTGGAATGAAATACATAGGGAATCTCCATTTAGTTaGCTATCATCTCGAGATTTC +
Preference number: 4 (lower is better)
Translates to: VHTHCYLTYMQKWNEIHRESPFS*LSSRDF
Trigger: GAAATCTCGAGATGATAGTCAACTAAATGGAGATTC...CCTATGTATTTCATTCCACTTTTGCATATAGGTCAAATAGCAATGTGTATGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CATCTTTCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAGAATAAAAACAGCCTaGGTATTTCCAAAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: HLSLNPERLASHYTHTSCRIKTA*VFPKLK
Trigger: CTTCAGCTTTGGAAATACTCAGGCTGTTTTTATTCT...ACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CATCTTTCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTTTTGAAAGGAGACTATaGCATTTGAGCATAAAGCCT +
Preference number: 4 (lower is better)
Translates to: HLSLNPERLASHYTHTSCFERRL*HLSIKP
Trigger: AGGCTTTATGCTCAAATGTCATAGTCTCCTTTCAAA...ACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp GTGCATACACATTGCTATTTGACCTATATGCAAAAGTGGAATGAAATACATAGGTTTGAAAGGAGACTATaGCATTTGAGCATAAAGCCT +
Preference number: 4 (lower is better)
Translates to: VHTHCYLTYMQKWNEIHRFERRL*HLSIKP
Trigger: AGGCTTTATGCTCAAATGTCATAGTCTCCTTTCAAA...CCTATGTATTTCATTCCACTTTTGCATATAGGTCAAATAGCAATGTGTATGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR TCA 90 bp CATCTTTCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTCAAACGATATTCACTTaGCTCTTCTCTTGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: HLSLNPERLASHYTHTSCQTIFT*LFSWLN
Trigger: ATTCAACCAAGAGAAGAGTCAAGTGAATATCGTTTG...ACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR GCA 90 bp AGTGCTCAAGATCATCCGTTTTCGTCCATCAAAATAATGTACAGGGTAATTGTATCATTATTTCCATCATaGTTACCTCTCTGTTTACTG +
Preference number: 4 (lower is better)
Translates to: SAQDHPFSSIKIMYRVIVSLFPS*LPLCLL
Trigger: CAGTAAACAGAGAGGTAAGCATGATGGAAATAATGA...TACAATTACCCTGTACATTATTTTGATGGACGAAAACGGATGATCTTGAGCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
CDS-3UTR CCA 90 bp AATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCTTTCTCGTCTTCTACTTAAGCTaGGTGCATTTAAAATGCAAC +
Preference number: 4 (lower is better)
Translates to: NPERLASHYTHTSCNPFLVFYLS*VHLKCN
Trigger: GTTGCATTTTAAATGCACCCAGCTTAAGTAGAAGAC...GAGAAAGGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CCA 90 bp AAAACAATTGGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCGTCTTCTACTTAAGCTaGGTGCATTTAAAATGCAAC +
Preference number: 4 (lower is better)
Translates to: KTIGALTKENVHTHCYLTVFYLS*VHLKCN
Trigger: GTTGCATTTTAAATGCACCCAGCTTAAGTAGAAGAC...GGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACCAATTGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR CAA 72 bp GCCTTAACTAAAGAGAATGTGCATACACATTGCTATTaGACCTATATGCAAAAGTGGAATGAAATACATAGG +
Preference number: 4 (lower is better)
Translates to: ALTKENVHTHCY*TYMQKWNEIHR
Trigger: CCTATGTATTTCATTCCACTTTTGCATATAGGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
3UTR CAA 72 bp ACTATCATCTCGAGATTTCACGTAACGACGATGGTTTaGATAGAAATTAGACAGTCCATAATACATAAACAC +
Preference number: 4 (lower is better)
Translates to: TIISRFHVTTMV*IEIRQSIIHKH
Trigger: GTGTTTATGTATTATGGACTGTCTAATTTCTATCAAAACCATCGTCGTTACGTGAAATCTCGAGATGATAGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673989.1
CDS CCA 90 bp GTTCATCGCCATCGATCCCTGGGGCGCCGCTCCGCGATTTGCAGGTaGACCACCCAGGGGGCCCGCCGGCTGACCCTGACAGGAACCGCT +
Preference number: 5 (lower is better)
Translates to: VHRHRSLGRRSAICR*TTQGARRLTLTGTA
Trigger: AGCGGTTCCTGTCAGGGTCAGCCGGCGGGCCCCCTGGGTGGTCCACCTGCAAATCGCGGAGCGGCGCCCCAGGGATCGATGGCGATGAAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS GCA 90 bp GTTATAGTTCATCGCCATCGATCCCTGGGGCGCCGCTCCGCGATTTaGAGGTGGACCACCCAGGGGGCCCGCCGGCTGACCCTGACAGGA +
Preference number: 5 (lower is better)
Translates to: VIVHRHRSLGRRSAI*RWTTQGARRLTLTG
Trigger: TCCTGTCAGGGTCAGCCGGCGGGCCCCCTGGGTGGTCCACCTGCAAATCGCGGAGCGGCGCCCCAGGGATCGATGGCGATGAACTATAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS TCA 90 bp CGCTGTAGAGCGGAAGAGGCGGGACACTCTTCCGCCAAAGGCTGCTaGCGGGAAGCGAAAGTCGGCTGGAGACGCCAGAGGGAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: RCRAEEAGHSSAKGC*REAKVGWRRQREGE
Trigger: CTCTCCCTCCCTCTGGCGTCTCCAGCCGACTTTCGCTTCCCGTCAGCAGCCTTTGGCGGAAGAGTGTCCCGCCTCTTCCGCTCTACAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475111.6
CDS GCA 90 bp AGCACCGTGCCAGCCGTAAGGATGGGCTGCCAAGCTGGCAGCCGTTaGTGTTTGAAGGCCGTGTTATCCGGTCTCCGAGTCTTCGCGGTG +
Preference number: 5 (lower is better)
Translates to: STVPAVRMGCQAGSR*CLKAVLSGLRVFAV
Trigger: CACCGCGAAGACTCGGAGACCGGATAACACGGCCTTCAAACAGCAACGGCTGCCAGCTTGGCAGCCCATCCTTACGGCTGGCACGGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CAA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCGCGCCGCTCCGCGATTaGCAGGTGGACCACCCAGGG +
Preference number: 5 (lower is better)
Translates to: LLSRTYPTTADMSINSYAAPLRD*QVDHPG
Trigger: CCCTGGGTGGTCCACCTGCAAATCGCGGAGCGGCGC...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS GCA 90 bp TATAATCAATCAGCCGTAAGGATGGGCTGCCAAGCTGGCAGCCGTTaGTGTTTGAAGGCCGTGTTATCCGGTCTCCGAGTCTTCGCGGTG +
Preference number: 5 (lower is better)
Translates to: YNQSAVRMGCQAGSR*CLKAVLSGLRVFAV
Trigger: CACCGCGAAGACTCGGAGACCGGATAACACGGCCTTCAAACAGCAACGGCTGCCAGCTTGGCAGCCCATCCTTACGGCTGATTGATTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673989.1
CDS GCA 90 bp ATGATGAAGAAAATAGGTAGCACCGTGCCAGCCGTAAGGATGGGCTaGCAAGCTGGCAGCCGTTGCTGTTTGAAGGCCGTGTTATCCGGT +
Preference number: 5 (lower is better)
Translates to: MMKKIGSTVPAVRMG*QAGSRCCLKAVLSG
Trigger: ACCGGATAACACGGCCTTCAAACAGCAACGGCTGCCAGCTTGGCAGCCCATCCTTACGGCTGGCACGGTGCTACCTATTTTCTTCATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CAA 90 bp CTGGACATTCCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGGCGCCGCTCCGCGATTaGCAGGTGGACCACCCAGGG +
Preference number: 5 (lower is better)
Translates to: LDIPLDLIPNLASLTVTQAPLRD*QVDHPG
Trigger: CCCTGGGTGGTCCACCTGCAAATCGCGGAGCGGCGC...CTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR CAA 90 bp CCCATGCTTCACAGAGACTATACGAATGTTCCATACTCTTCATATTTAGCAACAGCGCCGCTCCGCGATTaGCAGGTGGACCACCCAGGG +
Preference number: 5 (lower is better)
Translates to: PMLHRDYTNVPYSSYLATAPLRD*QVDHPG
Trigger: CCCTGGGTGGTCCACCTGCAAATCGCGGAGCGGCGC...TGTTGCTAAATATGAAGAGTATGGAACATTCGTATAGTCTCTGTGAAGCATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR CAA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCCCAAGCTGGCAGCCGTaGCTGTTTGAAGGCCGTGTT +
Preference number: 5 (lower is better)
Translates to: LLSRTYPTTADMSINSYAPSWQP*LFEGRV
Trigger: AACACGGCCTTCAAACAGCAACGGCTGCCAGCTTGG...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CAA 90 bp GGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCTATATGCAAGCGCCGCTCCGCGATTaGCAGGTGGACCACCCAGGG +
Preference number: 5 (lower is better)
Translates to: GALTKENVHTHCYLTYMQAPLRD*QVDHPG
Trigger: CCCTGGGTGGTCCACCTGCAAATCGCGGAGCGGCGC...TTGCATATAGGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR CAA 90 bp TCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCGCGCCGCTCCGCGATTaGCAGGTGGACCACCCAGGG +
Preference number: 5 (lower is better)
Translates to: SLNPERLASHYTHTSCNPAPLRD*QVDHPG
Trigger: CCCTGGGTGGTCCACCTGCAAATCGCGGAGCGGCGC...GGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CAA 90 bp AGGATGGTAGTCCTCCTTAAACAGCACAGACTCAATCTGGAAAGAGTGGCAGAACCAAGCTGGCAGCCGTaGCTGTTTGAAGGCCGTGTT +
Preference number: 5 (lower is better)
Translates to: RMVVLLKQHRLNLERVAEPSWQP*LFEGRV
Trigger: AACACGGCCTTCAAACAGCAACGGCTGCCAGCTTGG...TTCTGCCACTCTTTCCAGATTGAGTCTGTGCTGTTTAAGGAGGACTACCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR CAA 90 bp GAGTTCCTTAGAGATCAAACAGCAGAAAACAGGAGGAACTTAGGCCATCAATGGTGTAATCCCAGCAACTaGGGAGGCCGAAGTGGGCGG +
Preference number: 5 (lower is better)
Translates to: EFLRDQTAENRRNLGHQWCNPSN*GGRSGR
Trigger: CCGCCCACTTCGGCCTCCCAAGTTGCTGGGATTACA...CCATTGATGGCCTAAGTTCCTCCTGTTTTCTGCTGTTTGATCTCTAAGGAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674104.1
CDS-3UTR CAA 90 bp CATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGGGCAGCCGTTGCTGTTaGAAGGCCGTGTTATCCGGT +
Preference number: 5 (lower is better)
Translates to: HSKARLNRTGLDAHADDLGSRCC*KAVLSG
Trigger: ACCGGATAACACGGCCTTCAAACAGCAACGGCTGCC...CAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CAA 90 bp CTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCAGGCAGCCGTTGCTGTTaGAAGGCCGTGTTATCCGGT +
Preference number: 5 (lower is better)
Translates to: LTRYQHSKARLNRTGLDAGSRCC*KAVLSG
Trigger: ACCGGATAACACGGCCTTCAAACAGCAACGGCTGCC...TGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CAA 90 bp CATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGCCAAGCTGGCAGCCGTaGCTGTTTGAAGGCCGTGTT +
Preference number: 5 (lower is better)
Translates to: HSKARLNRTGLDAHADDLPSWQP*LFEGRV
Trigger: AACACGGCCTTCAAACAGCAACGGCTGCCAGCTTGG...CAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CAA 90 bp TCCTCCTCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGGCAGCCGTTGCTGTTaGAAGGCCGTGTTATCCGGT +
Preference number: 5 (lower is better)
Translates to: SSSLVRFFLCTPLHYFHHGSRCC*KAVLSG
Trigger: ACCGGATAACACGGCCTTCAAACAGCAACGGCTGCC...ATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGAGGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR CAA 90 bp CACATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATGGCAGCCGTTGCTGTTaGAAGGCCGTGTTATCCGGT +
Preference number: 5 (lower is better)
Translates to: HMKEALCIMWPVRIKSKHGSRCC*KAVLSG
Trigger: ACCGGATAACACGGCCTTCAAACAGCAACGGCTGCC...ATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CAA 90 bp CAGTCTCCATTAAGCACTTACATGTGGTTTACAGTTGAGGCAGAAGATGAAGGTCCAAGCTGGCAGCCGTaGCTGTTTGAAGGCCGTGTT +
Preference number: 5 (lower is better)
Translates to: QSPLSTYMWFTVEAEDEGPSWQP*LFEGRV
Trigger: AACACGGCCTTCAAACAGCAACGGCTGCCAGCTTGG...ACCTTCATCTTCTGCCTCAACTGTAAACCACATGTAAGTGCTTAATGGAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CAA 90 bp CAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACCTCTCTGTCCAAGCTGGCAGCCGTaGCTGTTTGAAGGCCGTGTT +
Preference number: 5 (lower is better)
Translates to: QVFPVYPTSLFPSCLPLCPSWQP*LFEGRV
Trigger: AACACGGCCTTCAAACAGCAACGGCTGCCAGCTTGG...ACAGAGAGGTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR CAA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCGTCCATCTCTGTGTCTaGGGATACTTCCCACAAAGG +
Preference number: 5 (lower is better)
Translates to: LLSRTYPTTADMSINSYAVHLCV*GYFPQR
Trigger: CCTTTGTGGGAAGTATCCCAAGACACAGAGATGGAC...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674151.1
CDS CCA 90 bp TTCCGGTATAATCAATCTCTACGACTCTGGTTCTTCTCCCAACAATaGCCAAGGTGTCCATCTCTGTGTCTTGGGATACTTCCCACAAAG +
Preference number: 5 (lower is better)
Translates to: FRYNQSLRLWFFSQQ*PRCPSLCLGILPTK
Trigger: CTTTGTGGGAAGTATCCCAAGACACAGAGATGGACACCTTGGCCATTGTTGGGAGAAGAACCAGAGTCGTAGAGATTGATTATACCGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674151.1
CDS-3UTR CAA 90 bp CTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCAAATCGTTCTTCCAGGTaGTCTCCTCCAGGGGGATTT +
Preference number: 5 (lower is better)
Translates to: LTRYQHSKARLNRTGLDANRSSR*SPPGGF
Trigger: AAATCCCCCTGGAGGAGACAACCTGGAAGAACGATT...TGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGAATCGTTCTTCCAGGTaGTCTCCTCCAGGGGGATTT +
Preference number: 5 (lower is better)
Translates to: HSKARLNRTGLDAHADDLNRSSR*SPPGGF
Trigger: AAATCCCCCTGGAGGAGACAACCTGGAAGAACGATT...CAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp GAGTTCCTTAGAGATCAAACAGCAGAAAACAGGAGGAACTTAGGCCATCAATGGAATCGTTCTTCCAGGTaGTCTCCTCCAGGGGGATTT +
Preference number: 5 (lower is better)
Translates to: EFLRDQTAENRRNLGHQWNRSSR*SPPGGF
Trigger: AAATCCCCCTGGAGGAGACAACCTGGAAGAACGATT...CCATTGATGGCCTAAGTTCCTCCTGTTTTCTGCTGTTTGATCTCTAAGGAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCGGCCAGCTGGTAATGTaGGATGTAAATCACTTTTCC +
Preference number: 5 (lower is better)
Translates to: LLSRTYPTTADMSINSYAGQLVM*DVNHFS
Trigger: GGAAAAGTGATTTACATCCAACATTACCAGCTGGCC...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCACATGTGGTTTACAGTaGAGGCAGAAGATGAAGGTC +
Preference number: 5 (lower is better)
Translates to: LLSRTYPTTADMSINSYATCGLQ*RQKMKV
Trigger: GACCTTCATCTTCTGCCTCAACTGTAAACCACATGT...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACCTCTCTGTAGGCAAGAGAAATGCTaGAACCCAGGGAGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: QVFPVYPTSLFPSCLPLCRQEKC*NPGSRG
Trigger: ACCTCTGCTCCCTGGGTTCAAGCATTTCTCTTGCCT...ACAGAGAGGTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674104.1
CDS CCA 90 bp AAAAGCAAGGTGTCACATCCGGAGATAAACATTTATTACAGGGACTaGAAGGCTCTGTTCCGGTATAATCAATCAGCCGTAAGGATGGGC +
Preference number: 5 (lower is better)
Translates to: KSKVSHPEINIYYRD*KALFRYNQSAVRMG
Trigger: GCCCATCCTTACGGCTGATTGATTATACCGGAACAGAGCCTTCCAGTCCCTGTAATAAATGTTTATCTCCGGATGTGACACCTTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673989.1
CDS-3UTR CAA 90 bp ATGAATTACATTTTATCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTCCAAGCTGGCAGCCGTaGCTGTTTGAAGGCCGTGTT +
Preference number: 5 (lower is better)
Translates to: MNYILSHPGMKKLKPGLTPSWQP*LFEGRV
Trigger: AACACGGCCTTCAAACAGCAACGGCTGCCAGCTTGG...AGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGATAAAATGTAATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR CAA 90 bp CTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCAATCTCGCGGATGTTGTaGGAGGTGACAAAAATGCCA +
Preference number: 5 (lower is better)
Translates to: LTRYQHSKARLNRTGLDAISRML*EVTKMP
Trigger: TGGCATTTTTGTCACCTCCAACAACATCCGCGAGAT...TGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CAA 90 bp GAGTTCCTTAGAGATCAAACAGCAGAAAACAGGAGGAACTTAGGCCATCAATGGTCGATCTCGCGGATGTaGTTGGAGGTGACAAAAATG +
Preference number: 5 (lower is better)
Translates to: EFLRDQTAENRRNLGHQWSISRM*LEVTKM
Trigger: CATTTTTGTCACCTCCAACAACATCCGCGAGATCGA...CCATTGATGGCCTAAGTTCCTCCTGTTTTCTGCTGTTTGATCTCTAAGGAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000674104.1
CDS-3UTR CAA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCCTCCACAAGGAGCAATaGGTTTGTCTTCATTTCTTC +
Preference number: 5 (lower is better)
Translates to: LLSRTYPTTADMSINSYALHKEQ*VCLHFF
Trigger: GAAGAAATGAAGACAAACCAATTGCTCCTTGTGGAG...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCTCATTAAACATGCTGTaGGCAATAGCTCCACAAGGA +
Preference number: 5 (lower is better)
Translates to: LLSRTYPTTADMSINSYASLNML*AIAPQG
Trigger: TCCTTGTGGAGCTATTGCCAACAGCATGTTTAATGA...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp GGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTAGAATGCCATAATCGTTCTTCCAGGTaGTCTCCTCCAGGGGGATTT +
Preference number: 5 (lower is better)
Translates to: GSMHHVACPNKKQTLECHNRSSR*SPPGGF
Trigger: AAATCCCCCTGGAGGAGACAACCTGGAAGAACGATT...ATGGCATTCTAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp TCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGCTTAACATTCCAAGTGAGTaGGGGTTCCTGACTGCAACA +
Preference number: 5 (lower is better)
Translates to: SKARLNRTGLDAHADDLLNIPSE*GFLTAT
Trigger: TGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTT...AAGCAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCAAACATTCCAAGTGAGTaGGGGTTCCTGACTGCAACA +
Preference number: 5 (lower is better)
Translates to: LTRYQHSKARLNRTGLDANIPSE*GFLTAT
Trigger: TGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTT...TGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS GCA 90 bp ATTGTTCCATCTTCAAGGAGCGCCCTTTCTGCAGAAAGTAAAGACTaGGTTTCTGAGAGGTCCTCTGTCTCTATGCTGACTTTTCTTCAT +
Preference number: 5 (lower is better)
Translates to: IVPSSRSALSAESKD*VSERSSVSMLTFLH
Trigger: ATGAAGAAAAGTCAGCATAGAGACAGAGGACCTCTCAGAAACGCAGTCTTTACTTTCTGCAGAAAGGGCGCTCCTTGAAGATGGAACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370050.9
CDS CCA 90 bp AAAAGCAAGGTGTCACATCCGGAGATAAACATTTATTACAGGGACTaGAAGGCTCTGTTCCGGTATAATCAATCTCGATCTCGCGGATGT +
Preference number: 5 (lower is better)
Translates to: KSKVSHPEINIYYRD*KALFRYNQSRSRGC
Trigger: ACATCCGCGAGATCGAGATTGATTATACCGGAACAGAGCCTTCCAGTCCCTGTAATAAATGTTTATCTCCGGATGTGACACCTTGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230461.11
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CAA 90 bp GTGCATACACATTGCTATTTGACCTATATGCAAAAGTGGAATGAAATACATAGGGGCAGCCGTTGCTGTTaGAAGGCCGTGTTATCCGGT +
Preference number: 5 (lower is better)
Translates to: VHTHCYLTYMQKWNEIHRGSRCC*KAVLSG
Trigger: ACCGGATAACACGGCCTTCAAACAGCAACGGCTGCC...CCTATGTATTTCATTCCACTTTTGCATATAGGTCAAATAGCAATGTGTATGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
CDS-3UTR CAA 90 bp CATCTTTCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTGGCAGCCGTTGCTGTTaGAAGGCCGTGTTATCCGGT +
Preference number: 5 (lower is better)
Translates to: HLSLNPERLASHYTHTSCGSRCC*KAVLSG
Trigger: ACCGGATAACACGGCCTTCAAACAGCAACGGCTGCC...ACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CAA 90 bp AAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGGAAATCTCGCGGATGTTGTaGGAGGTGACAAAAATGCCA +
Preference number: 5 (lower is better)
Translates to: KNIPSELGFLTATFNQTEISRML*EVTKMP
Trigger: TGGCATTTTTGTCACCTCCAACAACATCCGCGAGAT...TTCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CAA 90 bp GAGTTCCTTAGAGATCAAACAGCAGAAAACAGGAGGAACTTAGGCCATCAATGGGGCCAGCTGGTAATGTaGGATGTAAATCACTTTTCC +
Preference number: 5 (lower is better)
Translates to: EFLRDQTAENRRNLGHQWGQLVM*DVNHFS
Trigger: GGAAAAGTGATTTACATCCAACATTACCAGCTGGCC...CCATTGATGGCCTAAGTTCCTCCTGTTTTCTGCTGTTTGATCTCTAAGGAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGCATTCGAAAGCTAGGTaGAATAGGACTGGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: HSKARLNRTGLDAHADDLHSKAR*NRTGLD
Trigger: ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG...CAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CACATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATAACATTCCAAGTGAGTaGGGGTTCCTGACTGCAACA +
Preference number: 5 (lower is better)
Translates to: HMKEALCIMWPVRIKSKHNIPSE*GFLTAT
Trigger: TGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTT...ATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp TCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTGACGCTGTGTTAAAAACATGTGGTTTACAGTaGAGGCAGAAGATGAAGGTC +
Preference number: 5 (lower is better)
Translates to: SHPGMKKLKPGLTDAVLKTCGLQ*RQKMKV
Trigger: GACCTTCATCTTCTGCCTCAACTGTAAACCACATGT...TTTTAACACAGCGTCAGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp TCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTGACGCTGTGTTAAAACAGTTAGAAAAAGAGTaGCAGGATGGTAGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: SHPGMKKLKPGLTDAVLKQLEKE*QDGSPP
Trigger: AGGAGGACTACCATCCTGCAACTCTTTTTCTAACTG...TTTTAACACAGCGTCAGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS CCA 90 bp AAAAGCAAGGTGTCACATCCGGAGATAAACATTTATTACAGGGACTaGAAGGCTCTGTTCCGGTATAATCAATCTCTACGACTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: KSKVSHPEINIYYRD*KALFRYNQSLRLWF
Trigger: GAACCAGAGTCGTAGAGATTGATTATACCGGAACAGAGCCTTCCAGTCCCTGTAATAAATGTTTATCTCCGGATGTGACACCTTGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674151.1
CDS-3UTR CAA 90 bp TATAAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGTCGATCTCGCGGATGTaGTTGGAGGTGACAAAAATG +
Preference number: 5 (lower is better)
Translates to: YKNIPSELGFLTATFNQTSISRM*LEVTKM
Trigger: CATTTTTGTCACCTCCAACAACATCCGCGAGATCGA...CGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CAA 90 bp GAGTTCCTTAGAGATCAAACAGCAGAAAACAGGAGGAACTTAGGCCATCAATGGCTCCACAAGGAGCAATaGGTTTGTCTTCATTTCTTC +
Preference number: 5 (lower is better)
Translates to: EFLRDQTAENRRNLGHQWLHKEQ*VCLHFF
Trigger: GAAGAAATGAAGACAAACCAATTGCTCCTTGTGGAG...CCATTGATGGCCTAAGTTCCTCCTGTTTTCTGCTGTTTGATCTCTAAGGAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp AAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGGAAGGCCAGCTGGTAATGTaGGATGTAAATCACTTTTCC +
Preference number: 5 (lower is better)
Translates to: KNIPSELGFLTATFNQTEGQLVM*DVNHFS
Trigger: GGAAAAGTGATTTACATCCAACATTACCAGCTGGCC...TTCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CACATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATGGCCAGCTGGTAATGTaGGATGTAAATCACTTTTCC +
Preference number: 5 (lower is better)
Translates to: HMKEALCIMWPVRIKSKHGQLVM*DVNHFS
Trigger: GGAAAAGTGATTTACATCCAACATTACCAGCTGGCC...ATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp AAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGGAACATTCGAAAGCTAGGTaGAATAGGACTGGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: KNIPSELGFLTATFNQTEHSKAR*NRTGLD
Trigger: ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG...TTCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CACATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATCATTCGAAAGCTAGGTaGAATAGGACTGGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: HMKEALCIMWPVRIKSKHHSKAR*NRTGLD
Trigger: ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG...ATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTAAACATTCCAAGTGAGTaGGGGTTCCTGACTGCAACA +
Preference number: 5 (lower is better)
Translates to: HERGSMHHVACPNKKQTLNIPSE*GFLTAT
Trigger: TGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTT...TAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CAGTCTCCATTAAGCACTTACATGTGGTTTACAGTTGAGGCAGAAGATGAAGGTACATGTGGTTTACAGTaGAGGCAGAAGATGAAGGTC +
Preference number: 5 (lower is better)
Translates to: QSPLSTYMWFTVEAEDEGTCGLQ*RQKMKV
Trigger: GACCTTCATCTTCTGCCTCAACTGTAAACCACATGT...ACCTTCATCTTCTGCCTCAACTGTAAACCACATGTAAGTGCTTAATGGAGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CTGGACATTCCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGACATGTGGTTTACAGTaGAGGCAGAAGATGAAGGTC +
Preference number: 5 (lower is better)
Translates to: LDIPLDLIPNLASLTVTQTCGLQ*RQKMKV
Trigger: GACCTTCATCTTCTGCCTCAACTGTAAACCACATGT...CTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CACATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATACATGTGGTTTACAGTaGAGGCAGAAGATGAAGGTC +
Preference number: 5 (lower is better)
Translates to: HMKEALCIMWPVRIKSKHTCGLQ*RQKMKV
Trigger: GACCTTCATCTTCTGCCTCAACTGTAAACCACATGT...ATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCCATACACATTGCTATTaGACCTATATGCAAAAGTGG +
Preference number: 5 (lower is better)
Translates to: LLSRTYPTTADMSINSYAHTHCY*TYMQKW
Trigger: CCACTTTTGCATATAGGTCAAATAGCAATGTGTATG...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CACATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATCAGTTAGAAAAAGAGTaGCAGGATGGTAGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: HMKEALCIMWPVRIKSKHQLEKE*QDGSPP
Trigger: AGGAGGACTACCATCCTGCAACTCTTTTTCTAACTG...ATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CTGGACATTCCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGCAGTTAGAAAAAGAGTaGCAGGATGGTAGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: LDIPLDLIPNLASLTVTQQLEKE*QDGSPP
Trigger: AGGAGGACTACCATCCTGCAACTCTTTTTCTAACTG...CTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CTCCTAAGCAGGACCTACCCAACCACTGCAGACATGAGCATTAATTCTTATGCCAACAACACTGGAGCATaGTTATTTTATCAAGACACC +
Preference number: 5 (lower is better)
Translates to: LLSRTYPTTADMSINSYANNTGA*LFYQDT
Trigger: GGTGTCTTGATAAAATAACAATGCTCCAGTGTTGTT...GGCATAAGAATTAATGCTCATGTCTGCAGTGGTTGGGTAGGTCCTGCTTAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGCAATTACCCTGGCAATaGCTGGAATTGTTTCCAAGT +
Preference number: 5 (lower is better)
Translates to: HSKARLNRTGLDAHADDLQLPWQ*LELFPS
Trigger: ACTTGGAAACAATTCCAGCAATTGCCAGGGTAATTG...CAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370050.9
CDS-3UTR CAA 90 bp CATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGGTAACGACGATGGTTTaGATAGAAATTAGACAGTCC +
Preference number: 5 (lower is better)
Translates to: HSKARLNRTGLDAHADDLVTTMV*IEIRQS
Trigger: GGACTGTCTAATTTCTATCAAAACCATCGTCGTTAC...CAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CACATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATCTCCACAAGGAGCAATaGGTTTGTCTTCATTTCTTC +
Preference number: 5 (lower is better)
Translates to: HMKEALCIMWPVRIKSKHLHKEQ*VCLHFF
Trigger: GAAGAAATGAAGACAAACCAATTGCTCCTTGTGGAG...ATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CAGTCTCCATTAAGCACTTACATGTGGTTTACAGTTGAGGCAGAAGATGAAGGTCTCCACAAGGAGCAATaGGTTTGTCTTCATTTCTTC +
Preference number: 5 (lower is better)
Translates to: QSPLSTYMWFTVEAEDEGLHKEQ*VCLHFF
Trigger: GAAGAAATGAAGACAAACCAATTGCTCCTTGTGGAG...ACCTTCATCTTCTGCCTCAACTGTAAACCACATGTAAGTGCTTAATGGAGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp GGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTAGAATGCCATCTCCACAAGGAGCAATaGGTTTGTCTTCATTTCTTC +
Preference number: 5 (lower is better)
Translates to: GSMHHVACPNKKQTLECHLHKEQ*VCLHFF
Trigger: GAAGAAATGAAGACAAACCAATTGCTCCTTGTGGAG...ATGGCATTCTAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp AAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGGAACTCCACAAGGAGCAATaGGTTTGTCTTCATTTCTTC +
Preference number: 5 (lower is better)
Translates to: KNIPSELGFLTATFNQTELHKEQ*VCLHFF
Trigger: GAAGAAATGAAGACAAACCAATTGCTCCTTGTGGAG...TTCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CACATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTCATTAAACATGCTGTaGGCAATAGCTCCACAAGGA +
Preference number: 5 (lower is better)
Translates to: HMKEALCIMWPVRIKSKHSLNML*AIAPQG
Trigger: TCCTTGTGGAGCTATTGCCAACAGCATGTTTAATGA...ATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp AAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGGAATCATTAAACATGCTGTaGGCAATAGCTCCACAAGGA +
Preference number: 5 (lower is better)
Translates to: KNIPSELGFLTATFNQTESLNML*AIAPQG
Trigger: TCCTTGTGGAGCTATTGCCAACAGCATGTTTAATGA...TTCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CTGGACATTCCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGTCATTAAACATGCTGTaGGCAATAGCTCCACAAGGA +
Preference number: 5 (lower is better)
Translates to: LDIPLDLIPNLASLTVTQSLNML*AIAPQG
Trigger: TCCTTGTGGAGCTATTGCCAACAGCATGTTTAATGA...CTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGGAATGTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp GGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCTATATGCAAAATCGTTCTTCCAGGTaGTCTCCTCCAGGGGGATTT +
Preference number: 5 (lower is better)
Translates to: GALTKENVHTHCYLTYMQNRSSR*SPPGGF
Trigger: AAATCCCCCTGGAGGAGACAACCTGGAAGAACGATT...TTGCATATAGGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp ATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGGCCAGCTGGTAATGTaGGATGTAAATCACTTTTCC +
Preference number: 5 (lower is better)
Translates to: ILTRYQHSKARLNRTGLDGQLVM*DVNHFS
Trigger: GGAAAAGTGATTTACATCCAACATTACCAGCTGGCC...ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp TATAAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGGGCCAGCTGGTAATGTaGGATGTAAATCACTTTTCC +
Preference number: 5 (lower is better)
Translates to: YKNIPSELGFLTATFNQTGQLVM*DVNHFS
Trigger: GGAAAAGTGATTTACATCCAACATTACCAGCTGGCC...CGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp AATGACATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCGGCCAGCTGGTAATGTaGGATGTAAATCACTTTTCC +
Preference number: 5 (lower is better)
Translates to: NDILTRYQHSKARLNRTGGQLVM*DVNHFS
Trigger: GGAAAAGTGATTTACATCCAACATTACCAGCTGGCC...GCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTATGTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTACATTCGAAAGCTAGGTaGAATAGGACTGGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: HERGSMHHVACPNKKQTLHSKAR*NRTGLD
Trigger: ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG...TAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp TATAAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGCATTCGAAAGCTAGGTaGAATAGGACTGGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: YKNIPSELGFLTATFNQTHSKAR*NRTGLD
Trigger: ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG...CGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CCCATGCTTCACAGAGACTATACGAATGTTCCATACTCTTCATATTTAGCAACAAACATTCCAAGTGAGTaGGGGTTCCTGACTGCAACA +
Preference number: 5 (lower is better)
Translates to: PMLHRDYTNVPYSSYLATNIPSE*GFLTAT
Trigger: TGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTT...TGTTGCTAAATATGAAGAGTATGGAACATTCGTATAGTCTCTGTGAAGCATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp ATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATACATGTGGTTTACAGTaGAGGCAGAAGATGAAGGTC +
Preference number: 5 (lower is better)
Translates to: ILTRYQHSKARLNRTGLDTCGLQ*RQKMKV
Trigger: GACCTTCATCTTCTGCCTCAACTGTAAACCACATGT...ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp AGGATGGTAGTCCTCCTTAAACAGCACAGACTCAATCTGGAAAGAGTGGCAGAAGAATGTGCATACACATaGCTATTTGACCTATATGCA +
Preference number: 5 (lower is better)
Translates to: RMVVLLKQHRLNLERVAEECAYT*LFDLYA
Trigger: TGCATATAGGTCAAATAGCAATGTGTATGCACATTC...TTCTGCCACTCTTTCCAGATTGAGTCTGTGCTGTTTAAGGAGGACTACCATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTACAGTTAGAAAAAGAGTaGCAGGATGGTAGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: HERGSMHHVACPNKKQTLQLEKE*QDGSPP
Trigger: AGGAGGACTACCATCCTGCAACTCTTTTTCTAACTG...TAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp AGGATGGTAGTCCTCCTTAAACAGCACAGACTCAATCTGGAAAGAGTGGCAGAAAACAACACTGGAGCATaGTTATTTTATCAAGACACC +
Preference number: 5 (lower is better)
Translates to: RMVVLLKQHRLNLERVAENNTGA*LFYQDT
Trigger: GGTGTCTTGATAAAATAACAATGCTCCAGTGTTGTT...TTCTGCCACTCTTTCCAGATTGAGTCTGTGCTGTTTAAGGAGGACTACCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS CCA 90 bp AAAAGCAAGGTGTCACATCCGGAGATAAACATTTATTACAGGGACTaGAAGGCTCTGTTCCGGTATAATCAATCTGCAAATTCAGGAAAC +
Preference number: 5 (lower is better)
Translates to: KSKVSHPEINIYYRD*KALFRYNQSANSGN
Trigger: GTTTCCTGAATTTGCAGATTGATTATACCGGAACAGAGCCTTCCAGTCCCTGTAATAAATGTTTATCTCCGGATGTGACACCTTGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518161.1
CDS-3UTR CAA 90 bp TCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCATCTCGCGGATGTTGTaGGAGGTGACAAAAATGCCA +
Preference number: 5 (lower is better)
Translates to: SLNPERLASHYTHTSCNPISRML*EVTKMP
Trigger: TGGCATTTTTGTCACCTCCAACAACATCCGCGAGAT...GGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CAA 90 bp CAGTCTCCATTAAGCACTTACATGTGGTTTACAGTTGAGGCAGAAGATGAAGGTGTAACGACGATGGTTTaGATAGAAATTAGACAGTCC +
Preference number: 5 (lower is better)
Translates to: QSPLSTYMWFTVEAEDEGVTTMV*IEIRQS
Trigger: GGACTGTCTAATTTCTATCAAAACCATCGTCGTTAC...ACCTTCATCTTCTGCCTCAACTGTAAACCACATGTAAGTGCTTAATGGAGACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp TATAAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGCTCCACAAGGAGCAATaGGTTTGTCTTCATTTCTTC +
Preference number: 5 (lower is better)
Translates to: YKNIPSELGFLTATFNQTLHKEQ*VCLHFF
Trigger: GAAGAAATGAAGACAAACCAATTGCTCCTTGTGGAG...CGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp TATAAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGTCATTAAACATGCTGTaGGCAATAGCTCCACAAGGA +
Preference number: 5 (lower is better)
Translates to: YKNIPSELGFLTATFNQTSLNML*AIAPQG
Trigger: TCCTTGTGGAGCTATTGCCAACAGCATGTTTAATGA...CGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp AATGACATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCTCATTAAACATGCTGTaGGCAATAGCTCCACAAGGA +
Preference number: 5 (lower is better)
Translates to: NDILTRYQHSKARLNRTGSLNML*AIAPQG
Trigger: TCCTTGTGGAGCTATTGCCAACAGCATGTTTAATGA...GCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTATGTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp AAAACAATTGGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCAATCGTTCTTCCAGGTaGTCTCCTCCAGGGGGATTT +
Preference number: 5 (lower is better)
Translates to: KTIGALTKENVHTHCYLTNRSSR*SPPGGF
Trigger: AAATCCCCCTGGAGGAGACAACCTGGAAGAACGATT...GGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACCAATTGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CATCTTTCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCGTTCTTCCAGGTaGTCTCCTCCAGGGGGATTT +
Preference number: 5 (lower is better)
Translates to: HLSLNPERLASHYTHTSCNRSSR*SPPGGF
Trigger: AAATCCCCCTGGAGGAGACAACCTGGAAGAACGATT...ACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp AATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCTTTCTCAATCGTTCTTCCAGGTaGTCTCCTCCAGGGGGATTT +
Preference number: 5 (lower is better)
Translates to: NPERLASHYTHTSCNPFLNRSSR*SPPGGF
Trigger: AAATCCCCCTGGAGGAGACAACCTGGAAGAACGATT...GAGAAAGGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGATAAGACGATACAACTaGCGAAAAGTAGGTAATGCT +
Preference number: 5 (lower is better)
Translates to: HSKARLNRTGLDAHADDLIRRYN*RKVGNA
Trigger: AGCATTACCTACTTTTCGCAAGTTGTATCGTCTTAT...CAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp TCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGCTTCATACACATTGCTATTaGACCTATATGCAAAAGTGG +
Preference number: 5 (lower is better)
Translates to: SKARLNRTGLDAHADDLLHTHCY*TYMQKW
Trigger: CCACTTTTGCATATAGGTCAAATAGCAATGTGTATG...AAGCAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp TCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTGACGCTGTGTTAAAACATACACATTGCTATTaGACCTATATGCAAAAGTGG +
Preference number: 5 (lower is better)
Translates to: SHPGMKKLKPGLTDAVLKHTHCY*TYMQKW
Trigger: CCACTTTTGCATATAGGTCAAATAGCAATGTGTATG...TTTTAACACAGCGTCAGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCAGAATGTGCATACACATaGCTATTTGACCTATATGCA +
Preference number: 5 (lower is better)
Translates to: LTRYQHSKARLNRTGLDAECAYT*LFDLYA
Trigger: TGCATATAGGTCAAATAGCAATGTGTATGCACATTC...TGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGATGATAATCCAGTTAGAAAAAGAGTaGCAGGATGGTAGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: PLDLIPNLASLTVTQMIIQLEKE*QDGSPP
Trigger: AGGAGGACTACCATCCTGCAACTCTTTTTCTAACTG...GATTATCATCTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATGCACATGCAGATGATTTGACAAACGATATTCACTaGACTCTTCTCTTGGTTGAA +
Preference number: 5 (lower is better)
Translates to: HSKARLNRTGLDAHADDLTNDIH*TLLLVE
Trigger: TTCAACCAAGAGAAGAGTCAAGTGAATATCGTTTGT...CAAATCATCTGCATGTGCATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp GAGTTCCTTAGAGATCAAACAGCAGAAAACAGGAGGAACTTAGGCCATCAATGGACAAACGATATTCACTaGACTCTTCTCTTGGTTGAA +
Preference number: 5 (lower is better)
Translates to: EFLRDQTAENRRNLGHQWTNDIH*TLLLVE
Trigger: TTCAACCAAGAGAAGAGTCAAGTGAATATCGTTTGT...CCATTGATGGCCTAAGTTCCTCCTGTTTTCTGCTGTTTGATCTCTAAGGAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp TCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTGACGCTGTGTTAAAAACAAACGATATTCACTaGACTCTTCTCTTGGTTGAA +
Preference number: 5 (lower is better)
Translates to: SHPGMKKLKPGLTDAVLKTNDIH*TLLLVE
Trigger: TTCAACCAAGAGAAGAGTCAAGTGAATATCGTTTGT...TTTTAACACAGCGTCAGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp TCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACAAAGGTAATGGCACTTaGACCCTGTCAATTCACTCA +
Preference number: 5 (lower is better)
Translates to: SLVRFFLCTPLHYFHHAYKGNGT*TLSIHS
Trigger: TGAGTGAATTGACAGGGTCAAAGTGCCATTACCTTT...GTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674151.1
CDS-3UTR CAA 90 bp AAAACAATTGGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCATCTCGCGGATGTTGTaGGAGGTGACAAAAATGCCA +
Preference number: 5 (lower is better)
Translates to: KTIGALTKENVHTHCYLTISRML*EVTKMP
Trigger: TGGCATTTTTGTCACCTCCAACAACATCCGCGAGAT...GGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACCAATTGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000674104.1
CDS-3UTR CAA 90 bp AATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCTTTCTCATCTCGCGGATGTTGTaGGAGGTGACAAAAATGCCA +
Preference number: 5 (lower is better)
Translates to: NPERLASHYTHTSCNPFLISRML*EVTKMP
Trigger: TGGCATTTTTGTCACCTCCAACAACATCCGCGAGAT...GAGAAAGGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CAA 90 bp GTGCATACACATTGCTATTTGACCTATATGCAAAAGTGGAATGAAATACATAGGTCGATCTCGCGGATGTaGTTGGAGGTGACAAAAATG +
Preference number: 5 (lower is better)
Translates to: VHTHCYLTYMQKWNEIHRSISRM*LEVTKM
Trigger: CATTTTTGTCACCTCCAACAACATCCGCGAGATCGA...CCTATGTATTTCATTCCACTTTTGCATATAGGTCAAATAGCAATGTGTATGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000674104.1
CDS-3UTR CAA 90 bp AATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCTTTCTCTCGATCTCGCGGATGTaGTTGGAGGTGACAAAAATG +
Preference number: 5 (lower is better)
Translates to: NPERLASHYTHTSCNPFLSISRM*LEVTKM
Trigger: CATTTTTGTCACCTCCAACAACATCCGCGAGATCGA...GAGAAAGGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000674038.1
ENST00000674104.1
CDS-3UTR CAA 90 bp AATGACATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCGTAACGACGATGGTTTaGATAGAAATTAGACAGTCC +
Preference number: 5 (lower is better)
Translates to: NDILTRYQHSKARLNRTGVTTMV*IEIRQS
Trigger: GGACTGTCTAATTTCTATCAAAACCATCGTCGTTAC...GCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTATGTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp TCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACGTAACGACGATGGTTTaGATAGAAATTAGACAGTCC +
Preference number: 5 (lower is better)
Translates to: SLVRFFLCTPLHYFHHAYVTTMV*IEIRQS
Trigger: GGACTGTCTAATTTCTATCAAAACCATCGTCGTTAC...GTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230461.11
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp ATGAATTACATTTTATCCCATCCAGGCATGAAGAAGTTAAAACCTGGACTCACTGGCCAGCTGGTAATGTaGGATGTAAATCACTTTTCC +
Preference number: 5 (lower is better)
Translates to: MNYILSHPGMKKLKPGLTGQLVM*DVNHFS
Trigger: GGAAAAGTGATTTACATCCAACATTACCAGCTGGCC...AGTGAGTCCAGGTTTTAACTTCTTCATGCCTGGATGGGATAAAATGTAATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp AGTGCTCAAGATCATCCGTTTTCGTCCATCAAAATAATGTACAGGGTAATTGTACATTCGAAAGCTAGGTaGAATAGGACTGGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: SAQDHPFSSIKIMYRVIVHSKAR*NRTGLD
Trigger: ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG...TACAATTACCCTGTACATTATTTTGATGGACGAAAACGGATGATCTTGAGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673989.1
ENST00000674104.1
CDS-3UTR CAA 90 bp CACATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATGAATGTGCATACACATaGCTATTTGACCTATATGCA +
Preference number: 5 (lower is better)
Translates to: HMKEALCIMWPVRIKSKHECAYT*LFDLYA
Trigger: TGCATATAGGTCAAATAGCAATGTGTATGCACATTC...ATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp AAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGGAAACAAACGATATTCACTaGACTCTTCTCTTGGTTGAA +
Preference number: 5 (lower is better)
Translates to: KNIPSELGFLTATFNQTETNDIH*TLLLVE
Trigger: TTCAACCAAGAGAAGAGTCAAGTGAATATCGTTTGT...TTCCGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACCTCTCTGTACAAACGATATTCACTaGACTCTTCTCTTGGTTGAA +
Preference number: 5 (lower is better)
Translates to: QVFPVYPTSLFPSCLPLCTNDIH*TLLLVE
Trigger: TTCAACCAAGAGAAGAGTCAAGTGAATATCGTTTGT...ACAGAGAGGTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACCTCTCTGTAACAACACTGGAGCATaGTTATTTTATCAAGACACC +
Preference number: 5 (lower is better)
Translates to: QVFPVYPTSLFPSCLPLCNNTGA*LFYQDT
Trigger: GGTGTCTTGATAAAATAACAATGCTCCAGTGTTGTT...ACAGAGAGGTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CATGAAAGAGGCTCTATGCATCATGTGGCCTGTCCGAATAAAAAGCAAACATTATGGCAATTGCTGGAATaGTTTCCAAGTTTTGTGGAA +
Preference number: 5 (lower is better)
Translates to: HERGSMHHVACPNKKQTLWQLLE*FPSFVE
Trigger: TTCCACAAAACTTGGAAACAATTCCAGCAATTGCCA...TAATGTTTGCTTTTTATTCGGACAGGCCACATGATGCATAGAGCCTCTTTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370050.9
CDS-3UTR CAA 90 bp TATAAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGATAAGACGATACAACTaGCGAAAAGTAGGTAATGCT +
Preference number: 5 (lower is better)
Translates to: YKNIPSELGFLTATFNQTIRRYN*RKVGNA
Trigger: AGCATTACCTACTTTTCGCAAGTTGTATCGTCTTAT...CGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp ATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCCTTGATATAAGACGATACAACTaGCGAAAAGTAGGTAATGCT +
Preference number: 5 (lower is better)
Translates to: ILTRYQHSKARLNRTGLDIRRYN*RKVGNA
Trigger: AGCATTACCTACTTTTCGCAAGTTGTATCGTCTTAT...ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CATCTTTCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTCATTCGAAAGCTAGGTaGAATAGGACTGGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: HLSLNPERLASHYTHTSCHSKAR*NRTGLD
Trigger: ATCAAGGCCAGTCCTATTCAACCTAGCTTTCGAATG...ACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp TCACTAGTCAGGTTTTTCCTGTGTACCCCACTTCATTATTTCCATCATGCTTACCATACACATTGCTATTaGACCTATATGCAAAAGTGG +
Preference number: 5 (lower is better)
Translates to: SLVRFFLCTPLHYFHHAYHTHCY*TYMQKW
Trigger: CCACTTTTGCATATAGGTCAAATAGCAATGTGTATG...GTAAGCATGATGGAAATAATGAAGTGGGGTACACAGGAAAAACCTGACTAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp AATGACATACTAACCAGATATCAGCATTCGAAAGCTAGGTTGAATAGGACTGGCGAATGTGCATACACATaGCTATTTGACCTATATGCA +
Preference number: 5 (lower is better)
Translates to: NDILTRYQHSKARLNRTGECAYT*LFDLYA
Trigger: TGCATATAGGTCAAATAGCAATGTGTATGCACATTC...GCCAGTCCTATTCAACCTAGCTTTCGAATGCTGATATCTGGTTAGTATGTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp TATAAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGGAATGTGCATACACATaGCTATTTGACCTATATGCA +
Preference number: 5 (lower is better)
Translates to: YKNIPSELGFLTATFNQTECAYT*LFDLYA
Trigger: TGCATATAGGTCAAATAGCAATGTGTATGCACATTC...CGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp TATAAAAACATTCCAAGTGAGTTGGGGTTCCTGACTGCAACATTCAACCAAACGAACAACACTGGAGCATaGTTATTTTATCAAGACACC +
Preference number: 5 (lower is better)
Translates to: YKNIPSELGFLTATFNQTNNTGA*LFYQDT
Trigger: GGTGTCTTGATAAAATAACAATGCTCCAGTGTTGTT...CGTTTGGTTGAATGTTGCAGTCAGGAACCCCAACTCACTTGGAATGTTTTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp GTGCATACACATTGCTATTTGACCTATATGCAAAAGTGGAATGAAATACATAGGTCATTAAACATGCTGTaGGCAATAGCTCCACAAGGA +
Preference number: 5 (lower is better)
Translates to: VHTHCYLTYMQKWNEIHRSLNML*AIAPQG
Trigger: TCCTTGTGGAGCTATTGCCAACAGCATGTTTAATGA...CCTATGTATTTCATTCCACTTTTGCATATAGGTCAAATAGCAATGTGTATGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CCCATGCTTCACAGAGACTATACGAATGTTCCATACTCTTCATATTTAGCAACAGAATGTGCATACACATaGCTATTTGACCTATATGCA +
Preference number: 5 (lower is better)
Translates to: PMLHRDYTNVPYSSYLATECAYT*LFDLYA
Trigger: TGCATATAGGTCAAATAGCAATGTGTATGCACATTC...TGTTGCTAAATATGAAGAGTATGGAACATTCGTATAGTCTCTGTGAAGCATGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CCCCTTGATCTAATACCAAACTTAGCCAGTCTAACTGTAACTCAGATGATAATCGAATGTGCATACACATaGCTATTTGACCTATATGCA +
Preference number: 5 (lower is better)
Translates to: PLDLIPNLASLTVTQMIIECAYT*LFDLYA
Trigger: TGCATATAGGTCAAATAGCAATGTGTATGCACATTC...GATTATCATCTGAGTTACAGTTAGACTGGCTAAGTTTGGTATTAGATCAAGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CATCTTTCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTTATGTTGCTTTTCCTTaGTTCAAGTGTGCTCTCACC +
Preference number: 5 (lower is better)
Translates to: HLSLNPERLASHYTHTSCYVAFP*FKCALT
Trigger: GGTGAGAGCACACTTGAACAAAGGAAAAGCAACATA...ACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370050.9
CDS-3UTR CAA 90 bp GGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCTATATGCAAATAAGACGATACAACTaGCGAAAAGTAGGTAATGCT +
Preference number: 5 (lower is better)
Translates to: GALTKENVHTHCYLTYMQIRRYN*RKVGNA
Trigger: AGCATTACCTACTTTTCGCAAGTTGTATCGTCTTAT...TTGCATATAGGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp TCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCATAAGACGATACAACTaGCGAAAAGTAGGTAATGCT +
Preference number: 5 (lower is better)
Translates to: SLNPERLASHYTHTSCNPIRRYN*RKVGNA
Trigger: AGCATTACCTACTTTTCGCAAGTTGTATCGTCTTAT...GGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp GGTGCCTTAACTAAAGAGAATGTGCATACACATTGCTATTTGACCTATATGCAACATACACATTGCTATTaGACCTATATGCAAAAGTGG +
Preference number: 5 (lower is better)
Translates to: GALTKENVHTHCYLTYMQHTHCY*TYMQKW
Trigger: CCACTTTTGCATATAGGTCAAATAGCAATGTGTATG...TTGCATATAGGTCAAATAGCAATGTGTATGCACATTCTCTTTAGTTAAGGCACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp AATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTAATCCCTTTCTCATAAGACGATACAACTaGCGAAAAGTAGGTAATGCT +
Preference number: 5 (lower is better)
Translates to: NPERLASHYTHTSCNPFLIRRYN*RKVGNA
Trigger: AGCATTACCTACTTTTCGCAAGTTGTATCGTCTTAT...GAGAAAGGGATTACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp CATCTTTCTCTGAATCCTGAAAGGTTAGCAAGTCATTATACTCATACATCTTGTCATACACATTGCTATTaGACCTATATGCAAAAGTGG +
Preference number: 5 (lower is better)
Translates to: HLSLNPERLASHYTHTSCHTHCY*TYMQKW
Trigger: CCACTTTTGCATATAGGTCAAATAGCAATGTGTATG...ACAAGATGTATGAGTATAATGACTTGCTAACCTTTCAGGATTCAGAGAAAGATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230461.11
ENST00000370050.9
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS-3UTR CAA 90 bp GTGCATACACATTGCTATTTGACCTATATGCAAAAGTGGAATGAAATACATAGGAACAACACTGGAGCATaGTTATTTTATCAAGACACC +
Preference number: 5 (lower is better)
Translates to: VHTHCYLTYMQKWNEIHRNNTGA*LFYQDT
Trigger: GGTGTCTTGATAAAATAACAATGCTCCAGTGTTGTT...CCTATGTATTTCATTCCACTTTTGCATATAGGTCAAATAGCAATGTGTATGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000673730.1
ENST00000673989.1
ENST00000674104.1
ENST00000674151.1
CDS GCA 72 bp CATCGCCATCGATCCCTGGGGCGCCGCTCCGCGATTTaGAGGTGGACCACCCAGGGGGCCCGCCGGCTGACC +
Preference number: 6 (lower is better)
Translates to: HRHRSLGRRSAI*RWTTQGARRLT
Trigger: GGTCAGCCGGCGGGCCCCCTGGGTGGTCCACCTGCAAATCGCGGAGCGGCGCCCCAGGGATCGATGGCGATG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS CCA 72 bp CATCGATCCCTGGGGCGCCGCTCCGCGATTTGCAGGTaGACCACCCAGGGGGCCCGCCGGCTGACCCTGACA +
Preference number: 6 (lower is better)
Translates to: HRSLGRRSAICR*TTQGARRLTLT
Trigger: TGTCAGGGTCAGCCGGCGGGCCCCCTGGGTGGTCCACCTGCAAATCGCGGAGCGGCGCCCCAGGGATCGATG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS CAA 72 bp TCATCGCCATCGATCCCTGGGGCGCCGCTCCGCGATTaGCAGGTGGACCACCCAGGGGGCCCGCCGGCTGAC +
Preference number: 6 (lower is better)
Translates to: SSPSIPGAPLRD*QVDHPGGPPAD
Trigger: GTCAGCCGGCGGGCCCCCTGGGTGGTCCACCTGCAAATCGCGGAGCGGCGCCCCAGGGATCGATGGCGATGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS CAA 90 bp CGTTATAGTTCATCGCCATCGATCCCTGGGGCGCCGCTCCGCGATTaGCAGGTGGACCACCCAGGGGGCCCGCCGGCTGACCCTGACAGG +
Preference number: 6 (lower is better)
Translates to: RYSSSPSIPGAPLRD*QVDHPGGPPADPDR
Trigger: CCTGTCAGGGTCAGCCGGCGGGCCCCCTGGGTGGTCCACCTGCAAATCGCGGAGCGGCGCCCCAGGGATCGATGGCGATGAACTATAACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS TCA 72 bp GCGGAAGAGGCGGGACACTCTTCCGCCAAAGGCTGCTaGCGGGAAGCGAAAGTCGGCTGGAGACGCCAGAGG +
Preference number: 6 (lower is better)
Translates to: AEEAGHSSAKGC*REAKVGWRRQR
Trigger: CCTCTGGCGTCTCCAGCCGACTTTCGCTTCCCGTCAGCAGCCTTTGGCGGAAGAGTGTCCCGCCTCTTCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475111.6
CDS GCA 72 bp CCAGCCGTAAGGATGGGCTGCCAAGCTGGCAGCCGTTaGTGTTTGAAGGCCGTGTTATCCGGTCTCCGAGTC +
Preference number: 6 (lower is better)
Translates to: PAVRMGCQAGSR*CLKAVLSGLRV
Trigger: GACTCGGAGACCGGATAACACGGCCTTCAAACAGCAACGGCTGCCAGCTTGGCAGCCCATCCTTACGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000674038.1
ENST00000674104.1
CDS CAA 72 bp GCCAGCCGTAAGGATGGGCTGCCAAGCTGGCAGCCGTaGCTGTTTGAAGGCCGTGTTATCCGGTCTCCGAGT +
Preference number: 6 (lower is better)
Translates to: ASRKDGLPSWQP*LFEGRVIRSPS
Trigger: ACTCGGAGACCGGATAACACGGCCTTCAAACAGCAACGGCTGCCAGCTTGGCAGCCCATCCTTACGGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000674038.1
ENST00000674104.1
CDS GCA 72 bp TCAGCCGTAAGGATGGGCTGCCAAGCTGGCAGCCGTTaGTGTTTGAAGGCCGTGTTATCCGGTCTCCGAGTC +
Preference number: 6 (lower is better)
Translates to: SAVRMGCQAGSR*CLKAVLSGLRV
Trigger: GACTCGGAGACCGGATAACACGGCCTTCAAACAGCAACGGCTGCCAGCTTGGCAGCCCATCCTTACGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673989.1
CDS CAA 72 bp GTAAGGATGGGCTGCCAAGCTGGCAGCCGTTGCTGTTaGAAGGCCGTGTTATCCGGTCTCCGAGTCTTCGCG +
Preference number: 6 (lower is better)
Translates to: VRMGCQAGSRCC*KAVLSGLRVFA
Trigger: CGCGAAGACTCGGAGACCGGATAACACGGCCTTCAAACAGCAACGGCTGCCAGCTTGGCAGCCCATCCTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230461.11
ENST00000475111.6
ENST00000673730.1
ENST00000673989.1
ENST00000674038.1
ENST00000674104.1
CDS CAA 72 bp ATCAGCCGTAAGGATGGGCTGCCAAGCTGGCAGCCGTaGCTGTTTGAAGGCCGTGTTATCCGGTCTCCGAGT +
Preference number: 6 (lower is better)
Translates to: ISRKDGLPSWQP*LFEGRVIRSPS
Trigger: ACTCGGAGACCGGATAACACGGCCTTCAAACAGCAACGGCTGCCAGCTTGGCAGCCCATCCTTACGGCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673989.1
CDS GCA 72 bp TCTTCAAGGAGCGCCCTTTCTGCAGAAAGTAAAGACTaGGTTTCTGAGAGGTCCTCTGTCTCTATGCTGACT +
Preference number: 6 (lower is better)
Translates to: SSRSALSAESKD*VSERSSVSMLT
Trigger: AGTCAGCATAGAGACAGAGGACCTCTCAGAAACGCAGTCTTTACTTTCTGCAGAAAGGGCGCTCCTTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370050.9
CDS CAA 72 bp TACATAAACACGTTGCCCTCGATCTCGCGGATGTTGTaGGAGGTGACAAAAATGCCAATGCCGATGGGAATG +
Preference number: 6 (lower is better)
Translates to: YINTLPSISRML*EVTKMPMPMGM
Trigger: CATTCCCATCGGCATTGGCATTTTTGTCACCTCCAACAACATCCGCGAGATCGAGGGCAACGTGTTTATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475111.6
CDS CAA 72 bp CATTCCTTACTGGGATTCTCGATCTCGCGGATGTTGTaGGAGGTGACAAAAATGCCAATGCCGATGGGAATG +
Preference number: 6 (lower is better)
Translates to: HSLLGFSISRML*EVTKMPMPMGM
Trigger: CATTCCCATCGGCATTGGCATTTTTGTCACCTCCAACAACATCCGCGAGATCGAGAATCCCAGTAAGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673730.1
CDS CAA 72 bp TCACATTCCTTACTGGGATTCTCGATCTCGCGGATGTaGTTGGAGGTGACAAAAATGCCAATGCCGATGGGA +
Preference number: 6 (lower is better)
Translates to: SHSLLGFSISRM*LEVTKMPMPMG
Trigger: TCCCATCGGCATTGGCATTTTTGTCACCTCCAACAACATCCGCGAGATCGAGAATCCCAGTAAGGAATGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673730.1
CDS CAA 90 bp CTCCAGCCTGGGCGACAGAATGACGCTCCATCATTAAACATGCTGTaGGCAATAGCTCCACAAGGAGCAATTGGTTTGTCTTCATTTCTT +
Preference number: 6 (lower is better)
Translates to: LQPGRQNDAPSLNML*AIAPQGAIGLSSFL
Trigger: AAGAAATGAAGACAAACCAATTGCTCCTTGTGGAGCTATTGCCAACAGCATGTTTAATGATGGAGCGTCATTCTGTCGCCCAGGCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674104.1
CDS CAA 72 bp GGGCGACAGAATGACGCTCCATCATTAAACATGCTGTaGGCAATAGCTCCACAAGGAGCAATTGGTTTGTCT +
Preference number: 6 (lower is better)
Translates to: GRQNDAPSLNML*AIAPQGAIGLS
Trigger: AGACAAACCAATTGCTCCTTGTGGAGCTATTGCCAACAGCATGTTTAATGATGGAGCGTCATTCTGTCGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674104.1
CDS CCA 72 bp TATCAGTTTAAAACTGTGAGGTCCAGCTCCAGCCAATaGATGCAGGATACGACAGTAAGGATGATCCAAATG +
Preference number: 6 (lower is better)
Translates to: YQFKTVRSSSSQ*MQDTTVRMIQM
Trigger: CATTTGGATCATCCTTACTGTCGTATCCTGCATCCATTGGCTGGAGCTGGACCTCACAGTTTTAAACTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370050.9
CDS CCA 72 bp GTGTCACATCCGGAGATAAACATTTATTACAGGGACTaGAAGGCTCTGTTCCGGTATAATCAATCAGCCGTA +
Preference number: 6 (lower is better)
Translates to: VSHPEINIYYRD*KALFRYNQSAV
Trigger: TACGGCTGATTGATTATACCGGAACAGAGCCTTCCAGTCCCTGTAATAAATGTTTATCTCCGGATGTGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673989.1
CDS CCA 72 bp GTGTCACATCCGGAGATAAACATTTATTACAGGGACTaGAAGGCTCTGTTCCGGTATAATCAATCTCGATCT +
Preference number: 6 (lower is better)
Translates to: VSHPEINIYYRD*KALFRYNQSRS
Trigger: AGATCGAGATTGATTATACCGGAACAGAGCCTTCCAGTCCCTGTAATAAATGTTTATCTCCGGATGTGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230461.11
ENST00000674038.1
ENST00000674104.1
CDS CCA 72 bp GTGTCACATCCGGAGATAAACATTTATTACAGGGACTaGAAGGCTCTGTTCCGGTATAATCAATCTCTACGA +
Preference number: 6 (lower is better)
Translates to: VSHPEINIYYRD*KALFRYNQSLR
Trigger: TCGTAGAGATTGATTATACCGGAACAGAGCCTTCCAGTCCCTGTAATAAATGTTTATCTCCGGATGTGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674151.1
CDS CCA 72 bp GTGTCACATCCGGAGATAAACATTTATTACAGGGACTaGAAGGCTCTGTTCCGGTATAATCAATCTGCAAAT +
Preference number: 6 (lower is better)
Translates to: VSHPEINIYYRD*KALFRYNQSAN
Trigger: ATTTGCAGATTGATTATACCGGAACAGAGCCTTCCAGTCCCTGTAATAAATGTTTATCTCCGGATGTGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518161.1
CDS CAA 72 bp TCCAAATGCATAAGGGATAAATATGTTGCTTTTCCTTaGTTCAAGTGTGCTCTCACCATTGTTCCATCTTCA +
Preference number: 6 (lower is better)
Translates to: SKCIRDKYVAFP*FKCALTIVPSS
Trigger: TGAAGATGGAACAATGGTGAGAGCACACTTGAACAAAGGAAAAGCAACATATTTATCCCTTATGCATTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370050.9