RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM268 (Homo sapiens)

Ensembl gene IDs: ENSG00000157693

Ensembl transcript IDs: ENST00000288502.9, ENST00000374049.4, ENST00000471206.1, ENST00000482552.1

Found 406 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTTCTCTCCTCACCTGGGGCTCCCCATTGGCCATCTTGGGCTCCTaGAGCCTTCCTGACTGCTCAGTCTTGAAGGAAGATGAGTACCTT +
Preference number: 1 (lower is better)
Translates to: ASLLTWGSPLAILGS*SLPDCSVLKEDEYL
Trigger: AAGGTACTCATCTTCCTTCAAGACTGAGCAGTCAGGAAGGCTTCAGGAGCCCAAGATGGCCAATGGGGAGCCCCAGGTGAGGAGAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR TCA 90 bp GTCACCTTCGTGAATAATTTCCTTGAGCAAAGCTGCTCTCAGCCTTaGCCAAAGCAGCCTTTCCAGGGGCTGGTCTATACCCATGATCTC +
Preference number: 1 (lower is better)
Translates to: VTFVNNFLEQSCSQP*PKQPFQGLVYTHDL
Trigger: GAGATCATGGGTATAGACCAGCCCCTGGAAAGGCTGCTTTGGTCAAGGCTGAGAGCAGCTTTGCTCAAGGAAATTATTCACGAAGGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR CCA 90 bp ACCAGGTCATCTCAGCCATGTGGGGTTGCCAGATGTTTCTGCATGTaGATAAAGATAGATAGGCCAAGGGCTATGAGGGGGCAGAATAAG +
Preference number: 1 (lower is better)
Translates to: TRSSQPCGVARCFCM*IKIDRPRAMRGQNK
Trigger: CTTATTCTGCCCCCTCATAGCCCTTGGCCTATCTATCTTTATCCACATGCAGAAACATCTGGCAACCCCACATGGCTGAGATGACCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR TCA 90 bp TTGCCCAGTCTGGTCATCTTCATGTCTCCTGGGTTCTCTGAACAATaGAAGCAATGGGGGTCCAGTCTTTCCATACGTGTCCACAGTTCT +
Preference number: 1 (lower is better)
Translates to: LPSLVIFMSPGFSEQ*KQWGSSLSIRVHSS
Trigger: AGAACTGTGGACACGTATGGAAAGACTGGACCCCCATTGCTTTCATTGTTCAGAGAACCCAGGAGACATGAAGATGACCAGACTGGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR CCA 90 bp GGCATGAAGGGGTTGGAGATGGAAACATCATCTGAGGCCAAGTTTTaGACACATAATTTGCCCAGTCTGGTCATCTTCATGTCTCCTGGG +
Preference number: 1 (lower is better)
Translates to: GMKGLEMETSSEAKF*THNLPSLVIFMSPG
Trigger: CCCAGGAGACATGAAGATGACCAGACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGATGATGTTTCCATCTCCAACCCCTTCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR CCA 90 bp AGCAGCCTTTCCAGGGGCTGGTCTATACCCATGATCTCTCTTCTCTaGCACACAGAAAGTGAATGGTCAGACTCATCTCTTGAATGGCAA +
Preference number: 1 (lower is better)
Translates to: SSLSRGWSIPMISLL*HTESEWSDSSLEWQ
Trigger: TTGCCATTCAAGAGATGAGTCTGACCATTCACTTTCTGTGTGCCAGAGAAGAGAGATCATGGGTATAGACCAGCCCCTGGAAAGGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR TCA 90 bp CAACATTTCCTCTGTGCCAGGTCAGAAAGACAGTGGTCACCTTCGTaGATAATTTCCTTGAGCAAAGCTGCTCTCAGCCTTGACCAAAGC +
Preference number: 1 (lower is better)
Translates to: QHFLCARSERQWSPS*IISLSKAALSLDQS
Trigger: GCTTTGGTCAAGGCTGAGAGCAGCTTTGCTCAAGGAAATTATTCACGAAGGTGACCACTGTCTTTCTGACCTGGCACAGAGGAAATGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR GCA 90 bp AGAGAGAGTAGCTTTGGTGGGACTAGCTCTGTAACCATCAGCTTCTaGAAAGGCCAGGGGGTCAGCATGAGATGTCAAACAAGGATTTTT +
Preference number: 1 (lower is better)
Translates to: RESSFGGTSSVTISF*KGQGVSMRCQTRIF
Trigger: AAAAATCCTTGTTTGACATCTCATGCTGACCCCCTGGCCTTTGCAGAAGCTGATGGTTACAGAGCTAGTCCCACCAAAGCTACTCTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR CCA 90 bp AGGCTAGGTCTTGGGGGCTGGGGATCCTTTAGATGCGTTTGGTCTTaGGTCTATGAAACAATAGGTCTTCAAACTTGTTCAGGAGCAGAT +
Preference number: 1 (lower is better)
Translates to: RLGLGGWGSFRCVWS*VYETIGLQTCSGAD
Trigger: ATCTGCTCCTGAACAAGTTTGAAGACCTATTGTTTCATAGACCCAAGACCAAACGCATCTAAAGGATCCCCAGCCCCCAAGACCTAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR TCA 90 bp AGATCAGGTCCAGAACCCAGGTCCACAGCAATGTCATCATTCAAGTaGGTTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAA +
Preference number: 1 (lower is better)
Translates to: RSGPEPRSTAMSSFK*VWKAICKSCCGDGK
Trigger: TTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAACTCACTTGAATGATGACATTGCTGTGGACCTGGGTTCTGGACCTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR TCA 90 bp AAACTGAGGCACAGATGCCGAGAAATGTACATTGTGGGCATACCCTaGAAGCCCCACCCACCAGGTGAGACCATCAAAAATTCTAAAGAA +
Preference number: 1 (lower is better)
Translates to: KLRHRCREMYIVGIP*KPHPPGETIKNSKE
Trigger: TTCTTTAGAATTTTTGATGGTCTCACCTGGTGGGTGGGGCTTTCAGGGTATGCCCACAATGTACATTTCTCGGCATCTGTGCCTCAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR GCA 90 bp AATCGCAGACAAAGGCTAGGTCTTGGGGGCTGGGGATCCTTTAGATaGGTTTGGTCTTGGGTCTATGAAACAATAGGTCTTCAAACTTGT +
Preference number: 1 (lower is better)
Translates to: NRRQRLGLGGWGSFR*VWSWVYETIGLQTC
Trigger: ACAAGTTTGAAGACCTATTGTTTCATAGACCCAAGACCAAACGCATCTAAAGGATCCCCAGCCCCCAAGACCTAGCCTTTGTCTGCGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR CCA 90 bp AGACAAAGGCTAGGTCTTGGGGGCTGGGGATCCTTTAGATGCGTTTaGTCTTGGGTCTATGAAACAATAGGTCTTCAAACTTGTTCAGGA +
Preference number: 1 (lower is better)
Translates to: RQRLGLGGWGSFRCV*SWVYETIGLQTCSG
Trigger: TCCTGAACAAGTTTGAAGACCTATTGTTTCATAGACCCAAGACCAAACGCATCTAAAGGATCCCCAGCCCCCAAGACCTAGCCTTTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR CCA 90 bp GACCAGGCAAAGAAAGCAACTTGCCAAAAATTACACAGCTTGAAGTaGCAGATCAGGTCCAGAACCCAGGTCCACAGCAATGTCATCATT +
Preference number: 1 (lower is better)
Translates to: DQAKKATCQKLHSLK*QIRSRTQVHSNVII
Trigger: AATGATGACATTGCTGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGCCTGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR GCA 90 bp CGGGCTTCTTTCTATTGGTCACATTCACAGCCAACATTTCCTCTGTaGCAGGTCAGAAAGACAGTGGTCACCTTCGTGAATAATTTCCTT +
Preference number: 1 (lower is better)
Translates to: RASFYWSHSQPTFPL*QVRKTVVTFVNNFL
Trigger: AAGGAAATTATTCACGAAGGTGACCACTGTCTTTCTGACCTGGCACAGAGGAAATGTTGGCTGTGAATGTGACCAATAGAAAGAAGCCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR GCA 90 bp TGGAGATGGAAACATCATCTGAGGCCAAGTTTTGGACACATAATTTaGCCAGTCTGGTCATCTTCATGTCTCCTGGGTTCTCTGAACAAT +
Preference number: 1 (lower is better)
Translates to: WRWKHHLRPSFGHII*PVWSSSCLLGSLNN
Trigger: ATTGTTCAGAGAACCCAGGAGACATGAAGATGACCAGACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGATGATGTTTCCATCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR GCA 90 bp CATTATATTGATGGGCAAACTGAGGACCAGGCAAAGAAAGCAACTTaGCAAAAATTACACAGCTTGAAGTGGCAGATCAGGTCCAGAACC +
Preference number: 1 (lower is better)
Translates to: HYIDGQTEDQAKKAT*QKLHSLKWQIRSRT
Trigger: GGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGCCTGGTCCTCAGTTTGCCCATCAATATAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR CCA 90 bp CTTCTCTGGCACACAGAAAGTGAATGGTCAGACTCATCTCTTGAATaGCAAGCCACGTGTTTATTACATTTCTTGTTCACCAGACCCACT +
Preference number: 1 (lower is better)
Translates to: LLWHTESEWSDSSLE*QATCLLHFLFTRPT
Trigger: AGTGGGTCTGGTGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACCATTCACTTTCTGTGTGCCAGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR TCA 90 bp AATAGGTCTTCAAACTTGTTCAGGAGCAGATCACTTGGAAGCCTCTaGGCTCTTCAAAGAATTCCACAAGTGGCTGATCACACTTCATTC +
Preference number: 1 (lower is better)
Translates to: NRSSNLFRSRSLGSL*ALQRIPQVADHTSF
Trigger: GAATGAAGTGTGATCAGCCACTTGTGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAACAAGTTTGAAGACCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR TCA 90 bp GAAGGCTTCCTAAAGAAGGGCTTAAGAAAGCTGGACTTTGAAGCATaGATAGGAGTCCAACAAATGGAAAGGAATAGGTATGTCAGTCCA +
Preference number: 1 (lower is better)
Translates to: EGFLKKGLRKLDFEA*IGVQQMERNRYVSP
Trigger: TGGACTGACATACCTATTCCTTTCCATTTGTTGGACTCCTATTCATGCTTCAAAGTCCAGCTTTCTTAAGCCCTTCTTTAGGAAGCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR TCA 90 bp GGAAGAACTTGGATTAGAATAAACAGAACTCTAGAATCCATGCAATaGGTTACCACCTTCACTCTCACTCGAAGACATTGCACTGCCTAC +
Preference number: 1 (lower is better)
Translates to: GRTWIRINRTLESMQ*VTTFTLTRRHCTAY
Trigger: GTAGGCAGTGCAATGTCTTCGAGTGAGAGTGAAGGTGGTAACTCATTGCATGGATTCTAGAGTTCTGTTTATTCTAATCCAAGTTCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR CCA 90 bp AAACATCATCTGAGGCCAAGTTTTGGACACATAATTTGCCCAGTCTaGTCATCTTCATGTCTCCTGGGTTCTCTGAACAATGAAAGCAAT +
Preference number: 1 (lower is better)
Translates to: KHHLRPSFGHIICPV*SSSCLLGSLNNESN
Trigger: ATTGCTTTCATTGTTCAGAGAACCCAGGAGACATGAAGATGACCAGACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGATGATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR TCA 90 bp CATTTTTATTCTCTGTTAATTACTTACCGGGGTTCTAGGACTGACTaGGAAATACGGGCTTCTTTCTATTGGTCACATTCACAGCCAACA +
Preference number: 1 (lower is better)
Translates to: HFYSLLITYRGSRTD*EIRASFYWSHSQPT
Trigger: TGTTGGCTGTGAATGTGACCAATAGAAAGAAGCCCGTATTTCTCAGTCAGTCCTAGAACCCCGGTAAGTAATTAACAGAGAATAAAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR TCA 90 bp AACCTGCCAGGTACATGCTCTTATTCCCATCCTATAGATGAGGAATaGGACTCAATGAGAGGAAGAACATTGTTTTTAAGTGGAAGAACT +
Preference number: 1 (lower is better)
Translates to: NLPGTCSYSHPIDEE*DSMRGRTLFLSGRT
Trigger: AGTTCTTCCACTTAAAAACAATGTTCTTCCTCTCATTGAGTCTCATTCCTCATCTATAGGATGGGAATAAGAGCATGTACCTGGCAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR TCA 90 bp GTGTGTAGTATGCGATCTTCACAGCAACCCTGTAAAGTAGGTGAGACAGAGATCTGGCGGGGGTTGCAGTaGGCCAAGATCGCGCCACTG +
Preference number: 2 (lower is better)
Translates to: VCSMRSSQQPCKVGETEIWRGLQ*AKIAPL
Trigger: CAGTGGCGCGATCTTGGCTCACTGCAACCCCCGCCA...GATCTCTGTCTCACCTACTTTACAGGGTTGCTGTGAAGATCGCATACTACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CCA 90 bp AGAATTCCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGGCTTCTCTCCTCACCTaGGGCTCCCCATTGGCCATC +
Preference number: 2 (lower is better)
Translates to: RIPQVADHTSFQDNVHVGASLLT*GSPLAI
Trigger: GATGGCCAATGGGGAGCCCCAGGTGAGGAGAGAAGC...CCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGGAATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CCA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTAGCACAACACCCCAGTaGCTGACATCACAGGCCCCT +
Preference number: 2 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGSTTPQ*LTSQAP
Trigger: AGGGGCCTGTGATGTCAGCCACTGGGGTGTTGTGCT...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CCA 90 bp GTGTGTAGTATGCGATCTTCACAGCAACCCTGTAAAGTAGGTGAGACAGAGATCGTAATCCCAGCACTTTaGGAGCCCGAGGCGGGTGGA +
Preference number: 2 (lower is better)
Translates to: VCSMRSSQQPCKVGETEIVIPAL*EPEAGG
Trigger: TCCACCCGCCTCGGGCTCCCAAAGTGCTGGGATTAC...GATCTCTGTCTCACCTACTTTACAGGGTTGCTGTGAAGATCGCATACTACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CCA 90 bp GAGTTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCCCTGGGGCTCCCCATTaGCCATCTTGGGCTCCTGAA +
Preference number: 2 (lower is better)
Translates to: EFGKQFAKAAVGMAKQSIPGAPH*PSWAPE
Trigger: TTCAGGAGCCCAAGATGGCCAATGGGGAGCCCCAGG...GATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CCA 90 bp GAGTTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCGCTTCTCTCCTCACCTaGGGCTCCCCATTGGCCATC +
Preference number: 2 (lower is better)
Translates to: EFGKQFAKAAVGMAKQSIASLLT*GSPLAI
Trigger: GATGGCCAATGGGGAGCCCCAGGTGAGGAGAGAAGC...GATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR TCA 90 bp CCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGAAACATTTTTGTGCTGGGCCCTaGAGTGAGCACAACACCCCA +
Preference number: 2 (lower is better)
Translates to: PQVADHTSFQDNVHVGKHFCAGP*SEHNTP
Trigger: TGGGGTGTTGTGCTCACTTCAGGGCCCAGCACAAAA...ATGTTTCCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR TCA 90 bp ATTACACAGCTTGAAGTGGCAGATCAGGTCCAGAACCCAGGTCCACAGCAATGTGTCTCCTGGGTTCTCTaGACAATGAAAGCAATGGGG +
Preference number: 2 (lower is better)
Translates to: ITQLEVADQVQNPGPQQCVSWVL*TMKAMG
Trigger: CCCCATTGCTTTCATTGTTCAGAGAACCCAGGAGAC...ACATTGCTGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR GCA 90 bp GGTCAGACTCATCTCTTGAATGGCAAGCCACGTGTTTATTACATTTCTTGTTCACTAGGTGGCGGGGGTTaGAGTGAGCCAAGATCGCGC +
Preference number: 2 (lower is better)
Translates to: GQTHLLNGKPRVYYISCSLGGGG*SEPRSR
Trigger: GCGCGATCTTGGCTCACTGCAACCCCCGCCACCTAG...TGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR TCA 90 bp AGAATTCCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGCTCCTGAAGCCTTCCTaGCTGCTCAGTCTTGAAGGA +
Preference number: 2 (lower is better)
Translates to: RIPQVADHTSFQDNVHVGLLKPS*LLSLEG
Trigger: TCCTTCAAGACTGAGCAGTCAGGAAGGCTTCAGGAG...CCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGGAATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR TCA 90 bp CTTCACTCTCACTCGAAGACATTGCACTGCCTACACCATGGCCACATCTATCACGTCCAGGAAAGAGCGTaGACTCATAAAGGGGTTTTG +
Preference number: 2 (lower is better)
Translates to: LHSHSKTLHCLHHGHIYHVQERA*THKGVL
Trigger: CAAAACCCCTTTATGAGTTCACGCTCTTTCCTGGAC...GTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR TCA 90 bp CTTCACTCTCACTCGAAGACATTGCACTGCCTACACCATGGCCACATCTATCACGTCAGACTCATCTCTTaGATGGCAAGCCACGTGTTT +
Preference number: 2 (lower is better)
Translates to: LHSHSKTLHCLHHGHIYHVRLIS*MASHVF
Trigger: AAACACGTGGCTTGCCATTCAAGAGATGAGTCTGAC...GTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR GCA 90 bp CATCATCTGAGGCCAAGTTTTGGACACATAATTTGCCCAGTCTGGTCATCTTCAGTAACCATCAGCTTCTaGAAAGGCCAGGGGGTCAGC +
Preference number: 2 (lower is better)
Translates to: HHLRPSFGHIICPVWSSSVTISF*KGQGVS
Trigger: GCTGACCCCCTGGCCTTTGCAGAAGCTGATGGTTAC...TGAAGATGACCAGACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGATGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR GCA 90 bp CTTCACTCTCACTCGAAGACATTGCACTGCCTACACCATGGCCACATCTATCACAGGGGTTCAAGGCAATaGCACATAGAGCAGTATCCT +
Preference number: 2 (lower is better)
Translates to: LHSHSKTLHCLHHGHIYHRGSRQ*HIEQYP
Trigger: AGGATACTGCTCTATGTGGCATTGCCTTGAACCCCT...GTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR GCA 90 bp ATTACACAGCTTGAAGTGGCAGATCAGGTCCAGAACCCAGGTCCACAGCAATGTTCTGTCTCTGTCTTCTaGAGCCTGTGTACTGGTAGA +
Preference number: 2 (lower is better)
Translates to: ITQLEVADQVQNPGPQQCSVSVF*SLCTGR
Trigger: TCTACCAGTACACAGGCTGCAGAAGACAGAGACAGA...ACATTGCTGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CCA 90 bp CTTCACTCTCACTCGAAGACATTGCACTGCCTACACCATGGCCACATCTATCACTTACACAGCTTGAAGTaGCAGATCAGGTCCAGAACC +
Preference number: 2 (lower is better)
Translates to: LHSHSKTLHCLHHGHIYHLHSLK*QIRSRT
Trigger: GGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAA...GTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CCA 90 bp CTTCACTCTCACTCGAAGACATTGCACTGCCTACACCATGGCCACATCTATCACCAAGGTCACACAACTTaGAAGCAGCAGATCAGGAAG +
Preference number: 2 (lower is better)
Translates to: LHSHSKTLHCLHHGHIYHQGHTT*KQQIRK
Trigger: CTTCCTGATCTGCTGCTTCCAAGTTGTGTGACCTTG...GTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CCA 90 bp CTTCACTCTCACTCGAAGACATTGCACTGCCTACACCATGGCCACATCTATCACGAGAAATGTACATTGTaGGCATACCCTGAAAGCCCC +
Preference number: 2 (lower is better)
Translates to: LHSHSKTLHCLHHGHIYHEKCTL*AYPESP
Trigger: GGGGCTTTCAGGGTATGCCCACAATGTACATTTCTC...GTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR TCA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTCTGACTGCTCAGTCTTaGAGGAAGATGAGTACCTTC +
Preference number: 2 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGLTAQS*RKMSTF
Trigger: GAAGGTACTCATCTTCCTTCAAGACTGAGCAGTCAG...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR TCA 90 bp CATCATCTGAGGCCAAGTTTTGGACACATAATTTGCCCAGTCTGGTCATCTTCACTCCTGAAGCCTTCCTaGCTGCTCAGTCTTGAAGGA +
Preference number: 2 (lower is better)
Translates to: HHLRPSFGHIICPVWSSSLLKPS*LLSLEG
Trigger: TCCTTCAAGACTGAGCAGTCAGGAAGGCTTCAGGAG...TGAAGATGACCAGACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGATGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR TCA 90 bp CTTCACTCTCACTCGAAGACATTGCACTGCCTACACCATGGCCACATCTATCACAATTCCACAAGTGGCTaGTCACACTTCATTCCAGGA +
Preference number: 2 (lower is better)
Translates to: LHSHSKTLHCLHHGHIYHNSTSG*SHFIPG
Trigger: TCCTGGAATGAAGTGTGATCAGCCACTTGTGGAATT...GTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGAAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR GCA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTTCTGTCTCTGTCTTCTaGAGCCTGTGTACTGGTAGA +
Preference number: 2 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGSVSVF*SLCTGR
Trigger: TCTACCAGTACACAGGCTGCAGAAGACAGAGACAGA...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR GCA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTGCAATTTGCAAAAGCTaGTGTGGGGATGGCAAAGCA +
Preference number: 2 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGAICKS*CGDGKA
Trigger: TGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGC...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CCA 90 bp AGAATTCCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGCTCAGTTTCCCCATCTaGCATGAAGGGGTTGGAGAT +
Preference number: 2 (lower is better)
Translates to: RIPQVADHTSFQDNVHVGLSFPI*HEGVGD
Trigger: ATCTCCAACCCCTTCATGCCAGATGGGGAAACTGAG...CCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGGAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CCA 90 bp GTTCAGGAGCAGATCACTTGGAAGCCTCTGAGCTCTTCAAAGAATTCCACAAGTCTCAGTTTCCCCATCTaGCATGAAGGGGTTGGAGAT +
Preference number: 2 (lower is better)
Translates to: VQEQITWKPLSSSKNSTSLSFPI*HEGVGD
Trigger: ATCTCCAACCCCTTCATGCCAGATGGGGAAACTGAG...ACTTGTGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR TCA 90 bp GAGTTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCGCCAGGGGGTCAGCATaGGATGTCAAACAAGGATTT +
Preference number: 2 (lower is better)
Translates to: EFGKQFAKAAVGMAKQSIARGSA*DVKQGF
Trigger: AAATCCTTGTTTGACATCTCATGCTGACCCCCTGGC...GATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR TCA 90 bp TTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCCACGTCTCCTGGGTTCTCTaGACAATGAAAGCAATGGGG +
Preference number: 2 (lower is better)
Translates to: FGKQFAKAAVGMAKQSIHVSWVL*TMKAMG
Trigger: CCCCATTGCTTTCATTGTTCAGAGAACCCAGGAGAC...GTGGATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR TCA 90 bp GTGTGTAGTATGCGATCTTCACAGCAACCCTGTAAAGTAGGTGAGACAGAGATCGGGTTTTGTGGGAGATaGAGCCAAAATCGCAGACAA +
Preference number: 2 (lower is better)
Translates to: VCSMRSSQQPCKVGETEIGFCGR*SQNRRQ
Trigger: TTGTCTGCGATTTTGGCTTCATCTCCCACAAAACCC...GATCTCTGTCTCACCTACTTTACAGGGTTGCTGTGAAGATCGCATACTACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR TCA 90 bp CATCATCTGAGGCCAAGTTTTGGACACATAATTTGCCCAGTCTGGTCATCTTCACTGACTGCTCAGTCTTaGAGGAAGATGAGTACCTTC +
Preference number: 2 (lower is better)
Translates to: HHLRPSFGHIICPVWSSSLTAQS*RKMSTF
Trigger: GAAGGTACTCATCTTCCTTCAAGACTGAGCAGTCAG...TGAAGATGACCAGACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR TCA 90 bp CCAGGCAAAGAAAGCAACTTGCCAAAAATTACACAGCTTGAAGTGGCAGATCAGGTCCAGGAAAGAGCGTaGACTCATAAAGGGGTTTTG +
Preference number: 2 (lower is better)
Translates to: PGKESNLPKITQLEVADQVQERA*THKGVL
Trigger: CAAAACCCCTTTATGAGTTCACGCTCTTTCCTGGAC...CTGATCTGCCACTTCAAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR GCA 90 bp CCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGAAACATCCACAACCACAAGCGTaGATGCCTGTGAACAAAATA +
Preference number: 2 (lower is better)
Translates to: PQVADHTSFQDNVHVGKHPQPQA*MPVNKI
Trigger: TATTTTGTTCACAGGCATGCACGCTTGTGGTTGTGG...ATGTTTCCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CCA 90 bp CTCAAGTCAAACAGGATCAATCTTTCTCAAATATTCCTATCAACAGTTATCTGCCCTGGGGCTCCCCATTaGCCATCTTGGGCTCCTGAA +
Preference number: 2 (lower is better)
Translates to: LKSNRINLSQIFLSTVICPGAPH*PSWAPE
Trigger: TTCAGGAGCCCAAGATGGCCAATGGGGAGCCCCAGG...GCAGATAACTGTTGATAGGAATATTTGAGAAAGATTGATCCTGTTTGACTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR TCA 90 bp AGAATTCCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGACAGTTATCTGCCCTTaGTCTCTTTCTTCTGTCTCT +
Preference number: 2 (lower is better)
Translates to: RIPQVADHTSFQDNVHVGTVICP*SLSSVS
Trigger: AGAGACAGAAGAAAGAGATCAAGGGCAGATAACTGT...CCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGGAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR TCA 90 bp TTTCCTCTGTGCCAGGTCAGAAAGACAGTGGTCACCTTCGTGAATAATTTCCTTTCACTTGGAAGCCTCTaGGCTCTTCAAAGAATTCCA +
Preference number: 2 (lower is better)
Translates to: FPLCQVRKTVVTFVNNFLSLGSL*ALQRIP
Trigger: TGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGA...AAGGAAATTATTCACGAAGGTGACCACTGTCTTTCTGACCTGGCACAGAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR TCA 90 bp GTGTGTAGTATGCGATCTTCACAGCAACCCTGTAAAGTAGGTGAGACAGAGATCAAAAATTACACAGCTTaGAGTGGCAGATCAGGTCCA +
Preference number: 2 (lower is better)
Translates to: VCSMRSSQQPCKVGETEIKNYTA*SGRSGP
Trigger: TGGACCTGATCTGCCACTTCAAGCTGTGTAATTTTT...GATCTCTGTCTCACCTACTTTACAGGGTTGCTGTGAAGATCGCATACTACACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR GCA 90 bp TCAGAAAGGTTAAGTGACTTAGCCAAGGTCACACAACTTGGAAGCAGCAGATCACCACAACCACAAGCGTaGATGCCTGTGAACAAAATA +
Preference number: 2 (lower is better)
Translates to: SERLSDLAKVTQLGSSRSPQPQA*MPVNKI
Trigger: TATTTTGTTCACAGGCATGCACGCTTGTGGTTGTGG...TGATCTGCTGCTTCCAAGTTGTGTGACCTTGGCTAAGTCACTTAACCTTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR GCA 90 bp TTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCCACTGGGGATCCTTTAGATaGGTTTGGTCTTGGGTCTAT +
Preference number: 2 (lower is better)
Translates to: FGKQFAKAAVGMAKQSIHWGSFR*VWSWVY
Trigger: ATAGACCCAAGACCAAACGCATCTAAAGGATCCCCA...GTGGATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR GCA 90 bp CTTCACTCTCACTCGAAGACATTGCACTGCCTACACCATGGCCACATCTATCACGTTGCCAGATGTTTCTaGATGTGGATAAAGATAGAT +
Preference number: 2 (lower is better)
Translates to: LHSHSKTLHCLHHGHIYHVARCF*MWIKID
Trigger: ATCTATCTTTATCCACATGCAGAAACATCTGGCAAC...GTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CCA 90 bp CCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGAAACATTCTGAGGCCAAGTTTTaGACACATAATTTGCCCAGT +
Preference number: 2 (lower is better)
Translates to: PQVADHTSFQDNVHVGKHSEAKF*THNLPS
Trigger: ACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGA...ATGTTTCCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CCA 90 bp TTTCCTCTGTGCCAGGTCAGAAAGACAGTGGTCACCTTCGTGAATAATTTCCTTTTGCAAAAGCTGCTGTaGGGATGGCAAAGCAATCAA +
Preference number: 2 (lower is better)
Translates to: FPLCQVRKTVVTFVNNFLLQKLL*GWQSNQ
Trigger: TTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAA...AAGGAAATTATTCACGAAGGTGACCACTGTCTTTCTGACCTGGCACAGAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR CAA 90 bp GTCTATGAAACAATAGGTCTTCAAACTTGTTCAGGAGCAGATCACTaGGAAGCCTCTGAGCTCTTCAAAGAATTCCACAAGTGGCTGATC +
Preference number: 2 (lower is better)
Translates to: VYETIGLQTCSGADH*EASELFKEFHKWLI
Trigger: GATCAGCCACTTGTGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAACAAGTTTGAAGACCTATTGTTTCATAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR CAA 90 bp TCTCTCTTCTCTGGCACACAGAAAGTGAATGGTCAGACTCATCTCTaGAATGGCAAGCCACGTGTTTATTACATTTCTTGTTCACCAGAC +
Preference number: 2 (lower is better)
Translates to: SLFSGTQKVNGQTHL*NGKPRVYYISCSPD
Trigger: GTCTGGTGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACCATTCACTTTCTGTGTGCCAGAGAAGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR TCA 90 bp TTTCCTCTGTGCCAGGTCAGAAAGACAGTGGTCACCTTCGTGAATAATTTCCTTACAGTTATCTGCCCTTaGTCTCTTTCTTCTGTCTCT +
Preference number: 2 (lower is better)
Translates to: FPLCQVRKTVVTFVNNFLTVICP*SLSSVS
Trigger: AGAGACAGAAGAAAGAGATCAAGGGCAGATAACTGT...AAGGAAATTATTCACGAAGGTGACCACTGTCTTTCTGACCTGGCACAGAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR TCA 90 bp GGTCAGACTCATCTCTTGAATGGCAAGCCACGTGTTTATTACATTTCTTGTTCAGGGTTTTGTGGGAGATaGAGCCAAAATCGCAGACAA +
Preference number: 2 (lower is better)
Translates to: GQTHLLNGKPRVYYISCSGFCGR*SQNRRQ
Trigger: TTGTCTGCGATTTTGGCTTCATCTCCCACAAAACCC...TGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR GCA 90 bp CTCAAGTCAAACAGGATCAATCTTTCTCAAATATTCCTATCAACAGTTATCTGCGTAACCATCAGCTTCTaGAAAGGCCAGGGGGTCAGC +
Preference number: 2 (lower is better)
Translates to: LKSNRINLSQIFLSTVICVTISF*KGQGVS
Trigger: GCTGACCCCCTGGCCTTTGCAGAAGCTGATGGTTAC...GCAGATAACTGTTGATAGGAATATTTGAGAAAGATTGATCCTGTTTGACTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR GCA 90 bp GTTCAGGAGCAGATCACTTGGAAGCCTCTGAGCTCTTCAAAGAATTCCACAAGTTTTGGACACATAATTTaGCCAGTCTGGTCATCTTCA +
Preference number: 2 (lower is better)
Translates to: VQEQITWKPLSSSKNSTSFGHII*PVWSSS
Trigger: TGAAGATGACCAGACTGGGCAAATTATGTGTCCAAA...ACTTGTGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CCA 90 bp TTTCCTCTGTGCCAGGTCAGAAAGACAGTGGTCACCTTCGTGAATAATTTCCTTATAATTTGCCCAGTCTaGTCATCTTCATGTCTCCTG +
Preference number: 2 (lower is better)
Translates to: FPLCQVRKTVVTFVNNFLIICPV*SSSCLL
Trigger: CAGGAGACATGAAGATGACCAGACTGGGCAAATTAT...AAGGAAATTATTCACGAAGGTGACCACTGTCTTTCTGACCTGGCACAGAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CCA 90 bp GAGTTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCATAATTTGCCCAGTCTaGTCATCTTCATGTCTCCTG +
Preference number: 2 (lower is better)
Translates to: EFGKQFAKAAVGMAKQSIIICPV*SSSCLL
Trigger: CAGGAGACATGAAGATGACCAGACTGGGCAAATTAT...GATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR TCA 90 bp CCAGGCAAAGAAAGCAACTTGCCAAAAATTACACAGCTTGAAGTGGCAGATCAGTTGGTCTTGGGTCTATaGAACAATAGGTCTTCAAAC +
Preference number: 2 (lower is better)
Translates to: PGKESNLPKITQLEVADQLVLGL*NNRSSN
Trigger: GTTTGAAGACCTATTGTTTCATAGACCCAAGACCAA...CTGATCTGCCACTTCAAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGCCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR TCA 90 bp TTTCCTCTGTGCCAGGTCAGAAAGACAGTGGTCACCTTCGTGAATAATTTCCTTTTGGTCTTGGGTCTATaGAACAATAGGTCTTCAAAC +
Preference number: 2 (lower is better)
Translates to: FPLCQVRKTVVTFVNNFLLVLGL*NNRSSN
Trigger: GTTTGAAGACCTATTGTTTCATAGACCCAAGACCAA...AAGGAAATTATTCACGAAGGTGACCACTGTCTTTCTGACCTGGCACAGAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR GCA 90 bp TTTCCTCTGTGCCAGGTCAGAAAGACAGTGGTCACCTTCGTGAATAATTTCCTTTTTGGACACATAATTTaGCCAGTCTGGTCATCTTCA +
Preference number: 2 (lower is better)
Translates to: FPLCQVRKTVVTFVNNFLFGHII*PVWSSS
Trigger: TGAAGATGACCAGACTGGGCAAATTATGTGTCCAAA...AAGGAAATTATTCACGAAGGTGACCACTGTCTTTCTGACCTGGCACAGAGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CCA 90 bp TCAGAAAGGTTAAGTGACTTAGCCAAGGTCACACAACTTGGAAGCAGCAGATCAAAAGAATTCCACAAGTaGCTGATCACACTTCATTCC +
Preference number: 2 (lower is better)
Translates to: SERLSDLAKVTQLGSSRSKEFHK*LITLHS
Trigger: GGAATGAAGTGTGATCAGCCACTTGTGGAATTCTTT...TGATCTGCTGCTTCCAAGTTGTGTGACCTTGGCTAAGTCACTTAACCTTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CCA 90 bp GGTCAGACTCATCTCTTGAATGGCAAGCCACGTGTTTATTACATTTCTTGTTCATTGCAAAAGCTGCTGTaGGGATGGCAAAGCAATCAA +
Preference number: 2 (lower is better)
Translates to: GQTHLLNGKPRVYYISCSLQKLL*GWQSNQ
Trigger: TTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAA...TGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR TCA 90 bp CTCAAGTCAAACAGGATCAATCTTTCTCAAATATTCCTATCAACAGTTATCTGCGCCAGGGGGTCAGCATaGGATGTCAAACAAGGATTT +
Preference number: 2 (lower is better)
Translates to: LKSNRINLSQIFLSTVICARGSA*DVKQGF
Trigger: AAATCCTTGTTTGACATCTCATGCTGACCCCCTGGC...GCAGATAACTGTTGATAGGAATATTTGAGAAAGATTGATCCTGTTTGACTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CCA 90 bp CTGACTGAGAAATACGGGCTTCTTTCTATTGGTCACATTCACAGCCAACATTTCAGATGCGTTTGGTCTTaGGTCTATGAAACAATAGGT +
Preference number: 2 (lower is better)
Translates to: LTEKYGLLSIGHIHSQHFRCVWS*VYETIG
Trigger: ACCTATTGTTTCATAGACCCAAGACCAAACGCATCT...GAAATGTTGGCTGTGAATGTGACCAATAGAAAGAAGCCCGTATTTCTCAGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CCA 90 bp CTGACTGAGAAATACGGGCTTCTTTCTATTGGTCACATTCACAGCCAACATTTCAGATGTTTCTGCATGTaGATAAAGATAGATAGGCCA +
Preference number: 2 (lower is better)
Translates to: LTEKYGLLSIGHIHSQHFRCFCM*IKIDRP
Trigger: TGGCCTATCTATCTTTATCCACATGCAGAAACATCT...GAAATGTTGGCTGTGAATGTGACCAATAGAAAGAAGCCCGTATTTCTCAGTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR GCA 90 bp GGTCAGACTCATCTCTTGAATGGCAAGCCACGTGTTTATTACATTTCTTGTTCAGTTGCCAGATGTTTCTaGATGTGGATAAAGATAGAT +
Preference number: 2 (lower is better)
Translates to: GQTHLLNGKPRVYYISCSVARCF*MWIKID
Trigger: ATCTATCTTTATCCACATGCAGAAACATCTGGCAAC...TGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CAA 90 bp GTGTGTAGTATGCGATCTTCACAGCAACCCTGTAAAGTAGGTGAGACAGAGATCCATCACAGGCCCCTTTaGGAGTGCCCCCAGATGCTT +
Preference number: 3 (lower is better)
Translates to: VCSMRSSQQPCKVGETEIHHRPL*ECPQML
Trigger: AAGCATCTGGGGGCACTCCAAAAGGGGCCTGTGATG...GATCTCTGTCTCACCTACTTTACAGGGTTGCTGTGAAGATCGCATACTACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CAA 90 bp CCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGAAACATCATCACAGGCCCCTTTaGGAGTGCCCCCAGATGCTT +
Preference number: 3 (lower is better)
Translates to: PQVADHTSFQDNVHVGKHHHRPL*ECPQML
Trigger: AAGCATCTGGGGGCACTCCAAAAGGGGCCTGTGATG...ATGTTTCCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CAA 90 bp TCAGAAAGGTTAAGTGACTTAGCCAAGGTCACACAACTTGGAAGCAGCAGATCACAGAGAGCAGCAGGGTaGGCTGTGTGGGAAGGCTTC +
Preference number: 3 (lower is better)
Translates to: SERLSDLAKVTQLGSSRSQRAAG*AVWEGF
Trigger: GAAGCCTTCCCACACAGCCAACCCTGCTGCTCTCTG...TGATCTGCTGCTTCCAAGTTGTGTGACCTTGGCTAAGTCACTTAACCTTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CAA 90 bp CTTCACTCTCACTCGAAGACATTGCACTGCCTACACCATGGCCACATCTATCACCTCAGCCATGTGGGGTaGCCAGATGTTTCTGCATGT +
Preference number: 3 (lower is better)
Translates to: LHSHSKTLHCLHHGHIYHLSHVG*PDVSAC
Trigger: ACATGCAGAAACATCTGGCAACCCCACATGGCTGAG...GTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR CCA 72 bp AGCCAAAATCGCAGACAAAGGCTAGGTCTTGGGGGCTaGGGATCCTTTAGATGCGTTTGGTCTTGGGTCTAT +
Preference number: 3 (lower is better)
Translates to: SQNRRQRLGLGG*GSFRCVWSWVY
Trigger: ATAGACCCAAGACCAAACGCATCTAAAGGATCCCCAGCCCCCAAGACCTAGCCTTTGTCTGCGATTTTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CAA 90 bp GGTCAGACTCATCTCTTGAATGGCAAGCCACGTGTTTATTACATTTCTTGTTCATGTAATCCCAGCACTTaGGGAGCCCGAGGCGGGTGG +
Preference number: 3 (lower is better)
Translates to: GQTHLLNGKPRVYYISCSCNPST*GARGGW
Trigger: CCACCCGCCTCGGGCTCCCAAAGTGCTGGGATTACA...TGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR TCA 72 bp GCCCAGTCTGGTCATCTTCATGTCTCCTGGGTTCTCTaGACAATGAAAGCAATGGGGGTCCAGTCTTTCCAT +
Preference number: 3 (lower is better)
Translates to: AQSGHLHVSWVL*TMKAMGVQSFH
Trigger: ATGGAAAGACTGGACCCCCATTGCTTTCATTGTTCAGAGAACCCAGGAGACATGAAGATGACCAGACTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR TCA 72 bp GTGAATAATTTCCTTGAGCAAAGCTGCTCTCAGCCTTaGCCAAAGCAGCCTTTCCAGGGGCTGGTCTATACC +
Preference number: 3 (lower is better)
Translates to: VNNFLEQSCSQP*PKQPFQGLVYT
Trigger: GGTATAGACCAGCCCCTGGAAAGGCTGCTTTGGTCAAGGCTGAGAGCAGCTTTGCTCAAGGAAATTATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR TCA 72 bp CACAGATGCCGAGAAATGTACATTGTGGGCATACCCTaGAAGCCCCACCCACCAGGTGAGACCATCAAAAAT +
Preference number: 3 (lower is better)
Translates to: HRCREMYIVGIP*KPHPPGETIKN
Trigger: ATTTTTGATGGTCTCACCTGGTGGGTGGGGCTTTCAGGGTATGCCCACAATGTACATTTCTCGGCATCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR TCA 72 bp CTCTGTGCCAGGTCAGAAAGACAGTGGTCACCTTCGTaGATAATTTCCTTGAGCAAAGCTGCTCTCAGCCTT +
Preference number: 3 (lower is better)
Translates to: LCARSERQWSPS*IISLSKAALSL
Trigger: AAGGCTGAGAGCAGCTTTGCTCAAGGAAATTATTCACGAAGGTGACCACTGTCTTTCTGACCTGGCACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR GCA 72 bp CAAAGGCTAGGTCTTGGGGGCTGGGGATCCTTTAGATaGGTTTGGTCTTGGGTCTATGAAACAATAGGTCTT +
Preference number: 3 (lower is better)
Translates to: QRLGLGGWGSFR*VWSWVYETIGL
Trigger: AAGACCTATTGTTTCATAGACCCAAGACCAAACGCATCTAAAGGATCCCCAGCCCCCAAGACCTAGCCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CAA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTCCTGACTGCTCAGTCTaGAAGGAAGATGAGTACCTT +
Preference number: 3 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGPDCSV*KEDEYL
Trigger: AAGGTACTCATCTTCCTTCAAGACTGAGCAGTCAGG...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CAA 90 bp GTGTGTAGTATGCGATCTTCACAGCAACCCTGTAAAGTAGGTGAGACAGAGATCGGTCAGACTCATCTCTaGAATGGCAAGCCACGTGTT +
Preference number: 3 (lower is better)
Translates to: VCSMRSSQQPCKVGETEIGQTHL*NGKPRV
Trigger: AACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC...GATCTCTGTCTCACCTACTTTACAGGGTTGCTGTGAAGATCGCATACTACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR TCA 72 bp AGGCAAAGAAAGCAACTTGCCAAAAATTACACAGCTTaGAGTGGCAGATCAGGTCCAGAACCCAGGTCCACA +
Preference number: 3 (lower is better)
Translates to: RQRKQLAKNYTA*SGRSGPEPRST
Trigger: TGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR CCA 72 bp CTAGGTCTTGGGGGCTGGGGATCCTTTAGATGCGTTTaGTCTTGGGTCTATGAAACAATAGGTCTTCAAACT +
Preference number: 3 (lower is better)
Translates to: LGLGGWGSFRCV*SWVYETIGLQT
Trigger: AGTTTGAAGACCTATTGTTTCATAGACCCAAGACCAAACGCATCTAAAGGATCCCCAGCCCCCAAGACCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CAA 90 bp CATCATCTGAGGCCAAGTTTTGGACACATAATTTGCCCAGTCTGGTCATCTTCACCTGACTGCTCAGTCTaGAAGGAAGATGAGTACCTT +
Preference number: 3 (lower is better)
Translates to: HHLRPSFGHIICPVWSSSPDCSV*KEDEYL
Trigger: AAGGTACTCATCTTCCTTCAAGACTGAGCAGTCAGG...TGAAGATGACCAGACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CAA 90 bp CCAGGCAAAGAAAGCAACTTGCCAAAAATTACACAGCTTGAAGTGGCAGATCAGTCTGGCATGAAGGGGTaGGAGATGGAAACATCATCT +
Preference number: 3 (lower is better)
Translates to: PGKESNLPKITQLEVADQSGMKG*EMETSS
Trigger: AGATGATGTTTCCATCTCCAACCCCTTCATGCCAGA...CTGATCTGCCACTTCAAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR TCA 72 bp AAGCCTCTGAGCTCTTCAAAGAATTCCACAAGTGGCTaGTCACACTTCATTCCAGGACAATGTTCATGTCGG +
Preference number: 3 (lower is better)
Translates to: KPLSSSKNSTSG*SHFIPGQCSCR
Trigger: CCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGGAATTCTTTGAAGAGCTCAGAGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR GCA 72 bp TTCTATTGGTCACATTCACAGCCAACATTTCCTCTGTaGCAGGTCAGAAAGACAGTGGTCACCTTCGTGAAT +
Preference number: 3 (lower is better)
Translates to: FYWSHSQPTFPL*QVRKTVVTFVN
Trigger: ATTCACGAAGGTGACCACTGTCTTTCTGACCTGGCACAGAGGAAATGTTGGCTGTGAATGTGACCAATAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR CCA 72 bp CTGAGGCCAAGTTTTGGACACATAATTTGCCCAGTCTaGTCATCTTCATGTCTCCTGGGTTCTCTGAACAAT +
Preference number: 3 (lower is better)
Translates to: LRPSFGHIICPV*SSSCLLGSLNN
Trigger: ATTGTTCAGAGAACCCAGGAGACATGAAGATGACCAGACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR CCA 72 bp GGGTTGGAGATGGAAACATCATCTGAGGCCAAGTTTTaGACACATAATTTGCCCAGTCTGGTCATCTTCATG +
Preference number: 3 (lower is better)
Translates to: GLEMETSSEAKF*THNLPSLVIFM
Trigger: CATGAAGATGACCAGACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGATGATGTTTCCATCTCCAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR CCA 72 bp CTTGGGGGCTGGGGATCCTTTAGATGCGTTTGGTCTTaGGTCTATGAAACAATAGGTCTTCAAACTTGTTCA +
Preference number: 3 (lower is better)
Translates to: LGGWGSFRCVWS*VYETIGLQTCS
Trigger: TGAACAAGTTTGAAGACCTATTGTTTCATAGACCCAAGACCAAACGCATCTAAAGGATCCCCAGCCCCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CAA 90 bp GTTCAGGAGCAGATCACTTGGAAGCCTCTGAGCTCTTCAAAGAATTCCACAAGTAACAGTTATCTGCCCTaGATCTCTTTCTTCTGTCTC +
Preference number: 3 (lower is better)
Translates to: VQEQITWKPLSSSKNSTSNSYLP*ISFFCL
Trigger: GAGACAGAAGAAAGAGATCAAGGGCAGATAACTGTT...ACTTGTGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR GCA 72 bp AAACATCATCTGAGGCCAAGTTTTGGACACATAATTTaGCCAGTCTGGTCATCTTCATGTCTCCTGGGTTCT +
Preference number: 3 (lower is better)
Translates to: KHHLRPSFGHII*PVWSSSCLLGS
Trigger: AGAACCCAGGAGACATGAAGATGACCAGACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGATGATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR TCA 72 bp CCTGCCAGGTACATGCTCTTATTCCCATCCTATAGATaGGGAATGAGACTCAATGAGAGGAAGAACATTGTT +
Preference number: 3 (lower is better)
Translates to: PARYMLLFPSYR*GMRLNERKNIV
Trigger: AACAATGTTCTTCCTCTCATTGAGTCTCATTCCTCATCTATAGGATGGGAATAAGAGCATGTACCTGGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CAA 90 bp GAGTTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCAATAGGTCTTCAAACTaGTTCAGGAGCAGATCACTT +
Preference number: 3 (lower is better)
Translates to: EFGKQFAKAAVGMAKQSINRSSN*FRSRSL
Trigger: AAGTGATCTGCTCCTGAACAAGTTTGAAGACCTATT...GATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR TCA 72 bp TCTCTGTTAATTACTTACCGGGGTTCTAGGACTGACTaGGAAATACGGGCTTCTTTCTATTGGTCACATTCA +
Preference number: 3 (lower is better)
Translates to: SLLITYRGSRTD*EIRASFYWSHS
Trigger: TGAATGTGACCAATAGAAAGAAGCCCGTATTTCTCAGTCAGTCCTAGAACCCCGGTAAGTAATTAACAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR CCA 72 bp CACACAGAAAGTGAATGGTCAGACTCATCTCTTGAATaGCAAGCCACGTGTTTATTACATTTCTTGTTCACC +
Preference number: 3 (lower is better)
Translates to: HTESEWSDSSLE*QATCLLHFLFT
Trigger: GGTGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACCATTCACTTTCTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR-3UTR CAA 90 bp GGTCAGACTCATCTCTTGAATGGCAAGCCACGTGTTTATTACATTTCTTGTTCAAATAGGTCTTCAAACTaGTTCAGGAGCAGATCACTT +
Preference number: 3 (lower is better)
Translates to: GQTHLLNGKPRVYYISCSNRSSN*FRSRSL
Trigger: AAGTGATCTGCTCCTGAACAAGTTTGAAGACCTATT...TGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR TCA 72 bp TGGATTAGAATAAACAGAACTCTAGAATCCATGCAATaGGTTACCACCTTCACTCTCACTCGAAGACATTGC +
Preference number: 3 (lower is better)
Translates to: WIRINRTLESMQ*VTTFTLTRRHC
Trigger: GCAATGTCTTCGAGTGAGAGTGAAGGTGGTAACTCATTGCATGGATTCTAGAGTTCTGTTTATTCTAATCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR TCA 72 bp CTAAAGAAGGGCTTAAGAAAGCTGGACTTTGAAGCATaGATAGGAGTCCAACAAATGGAAAGGAATAGGTAT +
Preference number: 3 (lower is better)
Translates to: LKKGLRKLDFEA*IGVQQMERNRY
Trigger: ATACCTATTCCTTTCCATTTGTTGGACTCCTATTCATGCTTCAAAGTCCAGCTTTCTTAAGCCCTTCTTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR GCA 72 bp TTCTACATCTGTAATATAAAACCACAACCACAAGCGTaGATGCCTGTGAACAAAATAAGTCCTCAAGTCAAA +
Preference number: 3 (lower is better)
Translates to: FYICNIKPQPQA*MPVNKISPQVK
Trigger: TTTGACTTGAGGACTTATTTTGTTCACAGGCATGCACGCTTGTGGTTGTGGTTTTATATTACAGATGTAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR TCA 72 bp AACACACATCAAAGGCTCTCAAGCAGACCTTACAATTaGAAAACTGCTGCTTTGTCATTTAACAAACACATT +
Preference number: 3 (lower is better)
Translates to: NTHQRLSSRPYN*KTAALSFNKHI
Trigger: AATGTGTTTGTTAAATGACAAAGCAGCAGTTTTTCAATTGTAAGGTCTGCTTGAGAGCCTTTGATGTGTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTCAGCTCAGCATCATATaGCGCCCGCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGQLSII*RPRRRR
Trigger: GCGGCGGCGGCGCGGGCGGCATATGATGCTGAGCTG...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp ACAAGGATTTTTGTGCTGGGCCCTGAAGTGAGCACAACACCCCAGTGGCTGACACCATTGTGGAGCTCTTaGCCCCAGCCAGGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: TRIFVLGPEVSTTPQWLTPLWSS*PQPGGL
Trigger: GAGCCCTCCTGGCTGGGGGCAAGAGCTCCACAATGG...TGTCAGCCACTGGGGTGTTGTGCTCACTTCAGGGCCCAGCACAAAAATCCTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp CTTCACTCTCACTCGAAGACATTGCACTGCCTACACCATGGCCACATCTATCACGCGGCGGAGCGGAGCTaGAGGCCGCGTTTCATCAGC +
Preference number: 4 (lower is better)
Translates to: LHSHSKTLHCLHHGHIYHAAERS*RPRFIS
Trigger: GCTGATGAAACGCGGCCTCCAGCTCCGCTCCGCCGC...GTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374049.4
CDS-3UTR TCA 90 bp ATTACACAGCTTGAAGTGGCAGATCAGGTCCAGAACCCAGGTCCACAGCAATGTTGGCGGGGGTTGCAGTaGGCCAAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: ITQLEVADQVQNPGPQQCWRGLQ*AKIAPL
Trigger: CAGTGGCGCGATCTTGGCTCACTGCAACCCCCGCCA...ACATTGCTGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp ATTACACAGCTTGAAGTGGCAGATCAGGTCCAGAACCCAGGTCCACAGCAATGTAGGCCCCTCCGCTGTTaGAGGGCTCACCCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: ITQLEVADQVQNPGPQQCRPLRC*RAHPSL
Trigger: GAGACTGGGGTGAGCCCTGCAACAGCGGAGGGGCCT...ACATTGCTGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp ACAAGGATTTTTGTGCTGGGCCCTGAAGTGAGCACAACACCCCAGTGGCTGACAGTGTCGTGTCCCCATTaGCTGAGGGAGCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: TRIFVLGPEVSTTPQWLTVSCPH*LRELGG
Trigger: ACCTCCCAGCTCCCTCAGGCAATGGGGACACGACAC...TGTCAGCCACTGGGGTGTTGTGCTCACTTCAGGGCCCAGCACAAAAATCCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTCCGCCGGACTCGCTTTaGGGCCAAGAGGGAACGCGC +
Preference number: 4 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGPPDSL*GQEGTR
Trigger: GCGCGTTCCCTCTTGGCCCCAAAGCGAGTCCGGCGG...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp CCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGAAACATGGGGCAATGGGCCAGTaGCCCCCGGGTCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: PQVADHTSFQDNVHVGKHGAMGQ*PPGPPV
Trigger: CACAGGTGGACCCGGGGGCCACTGGCCCATTGCCCC...ATGTTTCCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GTGTGTAGTATGCGATCTTCACAGCAACCCTGTAAAGTAGGTGAGACAGAGATCGGGGCAATGGGCCAGTaGCCCCCGGGTCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: VCSMRSSQQPCKVGETEIGAMGQ*PPGPPV
Trigger: CACAGGTGGACCCGGGGGCCACTGGCCCATTGCCCC...GATCTCTGTCTCACCTACTTTACAGGGTTGCTGTGAAGATCGCATACTACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp TCAGAAAGGTTAAGTGACTTAGCCAAGGTCACACAACTTGGAAGCAGCAGATCACAGCTCAGCATCATATaGCGCCCGCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SERLSDLAKVTQLGSSRSQLSII*RPRRRR
Trigger: GCGGCGGCGGCGCGGGCGGCATATGATGCTGAGCTG...TGATCTGCTGCTTCCAAGTTGTGTGACCTTGGCTAAGTCACTTAACCTTTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp ATTACACAGCTTGAAGTGGCAGATCAGGTCCAGAACCCAGGTCCACAGCAATGTCTAGGTGGCGGGGGTTaGAGTGAGCCAAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: ITQLEVADQVQNPGPQQCLGGGG*SEPRSR
Trigger: GCGCGATCTTGGCTCACTGCAACCCCCGCCACCTAG...ACATTGCTGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp ACAAGGATTTTTGTGCTGGGCCCTGAAGTGAGCACAACACCCCAGTGGCTGACACAATCCGGAGAACAGTaGGGACCTGGCCATTGTGGA +
Preference number: 4 (lower is better)
Translates to: TRIFVLGPEVSTTPQWLTQSGEQ*GPGHCG
Trigger: TCCACAATGGCCAGGTCCTCACTGTTCTCCGGATTG...TGTCAGCCACTGGGGTGTTGTGCTCACTTCAGGGCCCAGCACAAAAATCCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTCGTGTCCCCATTGCCTaGGGGAGCTGGGAGGTCACT +
Preference number: 4 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGRVPIA*GSWEVT
Trigger: AGTGACCTCCCAGCTCCCTCAGGCAATGGGGACACG...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp ACAAGGATTTTTGTGCTGGGCCCTGAAGTGAGCACAACACCCCAGTGGCTGACAAGCTGCTCTCAGCCTTaGCCAAAGCAGCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: TRIFVLGPEVSTTPQWLTSCSQP*PKQPFQ
Trigger: CTGGAAAGGCTGCTTTGGTCAAGGCTGAGAGCAGCT...TGTCAGCCACTGGGGTGTTGTGCTCACTTCAGGGCCCAGCACAAAAATCCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp ACAAGGATTTTTGTGCTGGGCCCTGAAGTGAGCACAACACCCCAGTGGCTGACAGTAACCATCAGCTTCTaGAAAGGCCAGGGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: TRIFVLGPEVSTTPQWLTVTISF*KGQGVS
Trigger: GCTGACCCCCTGGCCTTTGCAGAAGCTGATGGTTAC...TGTCAGCCACTGGGGTGTTGTGCTCACTTCAGGGCCCAGCACAAAAATCCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp TTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCCACGCGGAGCCGACCACGTaGACGGCATCTTGGGGCACG +
Preference number: 4 (lower is better)
Translates to: FGKQFAKAAVGMAKQSIHAEPTT*TASWGT
Trigger: CGTGCCCCAAGATGCCGTGCACGTGGTCGGCTCCGC...GTGGATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374049.4
CDS-3UTR CCA 90 bp TTTCCTCTGTGCCAGGTCAGAAAGACAGTGGTCACCTTCGTGAATAATTTCCTTCCGCCGGACTCGCTTTaGGGCCAAGAGGGAACGCGC +
Preference number: 4 (lower is better)
Translates to: FPLCQVRKTVVTFVNNFLPPDSL*GQEGTR
Trigger: GCGCGTTCCCTCTTGGCCCCAAAGCGAGTCCGGCGG...AAGGAAATTATTCACGAAGGTGACCACTGTCTTTCTGACCTGGCACAGAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp AGAATTCCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGCGTGTCCCCATTGCCTaGGGGAGCTGGGAGGTCACT +
Preference number: 4 (lower is better)
Translates to: RIPQVADHTSFQDNVHVGRVPIA*GSWEVT
Trigger: AGTGACCTCCCAGCTCCCTCAGGCAATGGGGACACG...CCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGGAATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp CCAGGCAAAGAAAGCAACTTGCCAAAAATTACACAGCTTGAAGTGGCAGATCAGTGGCGGGGGTTGCAGTaGGCCAAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: PGKESNLPKITQLEVADQWRGLQ*AKIAPL
Trigger: CAGTGGCGCGATCTTGGCTCACTGCAACCCCCGCCA...CTGATCTGCCACTTCAAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp AGAATTCCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGGGGTCACGAGCAGCATaGCAGCCCAGTGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: RIPQVADHTSFQDNVHVGGSRAA*QPSGSP
Trigger: TGGGGAACCACTGGGCTGGCATGCTGCTCGTGACCC...CCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGGAATTCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GTTCAGGAGCAGATCACTTGGAAGCCTCTGAGCTCTTCAAAGAATTCCACAAGTAACACTGCCAGCAGCTaGCGGGCCATTTCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: VQEQITWKPLSSSKNSTSNTASS*RAISSG
Trigger: GCCGGAGGAAATGGCCCGCCAGCTGCTGGCAGTGTT...ACTTGTGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp CCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGAAACATAACACTGCCAGCAGCTaGCGGGCCATTTCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: PQVADHTSFQDNVHVGKHNTASS*RAISSG
Trigger: GCCGGAGGAAATGGCCCGCCAGCTGCTGGCAGTGTT...ATGTTTCCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp CTTCACTCTCACTCGAAGACATTGCACTGCCTACACCATGGCCACATCTATCACAGCACAACACCCCAGTaGCTGACATCACAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LHSHSKTLHCLHHGHIYHSTTPQ*LTSQAP
Trigger: AGGGGCCTGTGATGTCAGCCACTGGGGTGTTGTGCT...GTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTGTAATCCCAGCACTTTaGGAGCCCGAGGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGVIPAL*EPEAGG
Trigger: TCCACCCGCCTCGGGCTCCCAAAGTGCTGGGATTAC...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTATTGTGGGCATACCCTaGAAGCCCCACCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGIVGIP*KPHPPG
Trigger: ACCTGGTGGGTGGGGCTTTCAGGGTATGCCCACAAT...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp CCAGGCAAAGAAAGCAACTTGCCAAAAATTACACAGCTTGAAGTGGCAGATCAGCCATTGTGGAGCTCTTaGCCCCAGCCAGGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: PGKESNLPKITQLEVADQPLWSS*PQPGGL
Trigger: GAGCCCTCCTGGCTGGGGGCAAGAGCTCCACAATGG...CTGATCTGCCACTTCAAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTCAGCCGGGACCTGGATaGCCCAAGTTTGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGQPGPG*PKFAVA
Trigger: AGCAACTGCAAACTTGGGGCATCCAGGTCCCGGCTG...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288502.9
CDS-3UTR GCA 90 bp AGAATTCCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGGGCTCCATTGGCAGCTaGCAGCCTCAGGTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: RIPQVADHTSFQDNVHVGGSIGS*QPQVRV
Trigger: AACACGGACCTGAGGCTGGCAGCTGCCAATGGAGCC...CCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGGAATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp GTTCAGGAGCAGATCACTTGGAAGCCTCTGAGCTCTTCAAAGAATTCCACAAGTGGCTCCATTGGCAGCTaGCAGCCTCAGGTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: VQEQITWKPLSSSKNSTSGSIGS*QPQVRV
Trigger: AACACGGACCTGAGGCTGGCAGCTGCCAATGGAGCC...ACTTGTGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp TGCAGCCTGTGTACTGGTAGACAACACGTACACATACCACTGCTTTTCACAAAAGTAGCCGCCAAACACTaGCAGCAGCTGGCGGGCCAT +
Preference number: 4 (lower is better)
Translates to: CSLCTGRQHVHIPLLFTKVAAKH*QQLAGH
Trigger: ATGGCCCGCCAGCTGCTGGCAGTGTTTGGCGGCTAC...TTTTGTGAAAAGCAGTGGTATGTGTACGTGTTGTCTACCAGTACACAGGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp CCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGAAACATGTGTCGTGTCCCCATTaGCTGAGGGAGCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PQVADHTSFQDNVHVGKHVSCPH*LRELGG
Trigger: ACCTCCCAGCTCCCTCAGGCAATGGGGACACGACAC...ATGTTTCCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp CTTCACTCTCACTCGAAGACATTGCACTGCCTACACCATGGCCACATCTATCACACGGGCAGCACCCTGTaGCTAGGATGTAGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: LHSHSKTLHCLHHGHIYHTGSTL*LGCRLL
Trigger: TAGAAGCCTACATCCTAGGCACAGGGTGCTGCCCGT...GTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp CATCATCTGAGGCCAAGTTTTGGACACATAATTTGCCCAGTCTGGTCATCTTCACTAGGTGGCGGGGGTTaGAGTGAGCCAAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: HHLRPSFGHIICPVWSSSLGGGG*SEPRSR
Trigger: GCGCGATCTTGGCTCACTGCAACCCCCGCCACCTAG...TGAAGATGACCAGACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGATGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp ACAAGGATTTTTGTGCTGGGCCCTGAAGTGAGCACAACACCCCAGTGGCTGACATCGAAGACATTGCACTaGCTACACCATGGCCACATC +
Preference number: 4 (lower is better)
Translates to: TRIFVLGPEVSTTPQWLTSKTLH*LHHGHI
Trigger: GATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGA...TGTCAGCCACTGGGGTGTTGTGCTCACTTCAGGGCCCAGCACAAAAATCCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp AGAATTCCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGAGGACCTGGCCATTGTaGAGCTCTTGCCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: RIPQVADHTSFQDNVHVGRTWPL*SSCPQP
Trigger: TGGCTGGGGGCAAGAGCTCCACAATGGCCAGGTCCT...CCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGGAATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GTTCAGGAGCAGATCACTTGGAAGCCTCTGAGCTCTTCAAAGAATTCCACAAGTCCTGGGGCTCCCCATTaGCCATCTTGGGCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: VQEQITWKPLSSSKNSTSPGAPH*PSWAPE
Trigger: TTCAGGAGCCCAAGATGGCCAATGGGGAGCCCCAGG...ACTTGTGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GTTCAGGAGCAGATCACTTGGAAGCCTCTGAGCTCTTCAAAGAATTCCACAAGTGCTTCTCTCCTCACCTaGGGCTCCCCATTGGCCATC +
Preference number: 4 (lower is better)
Translates to: VQEQITWKPLSSSKNSTSASLLT*GSPLAI
Trigger: GATGGCCAATGGGGAGCCCCAGGTGAGGAGAGAAGC...ACTTGTGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GAGTTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCGCCAAGCTCCTGTACTaGTCAGCCGGGACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: EFGKQFAKAAVGMAKQSIAKLLY*SAGTCW
Trigger: CCAGCAGGTCCCGGCTGACCAGTACAGGAGCTTGGC...GATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374049.4
CDS-3UTR GCA 90 bp CCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGAAACATCCCCAAGTTTGCAGTTaGTCTTCTGCGGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PQVADHTSFQDNVHVGKHPQVCS*SSAAPR
Trigger: CCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGGGG...ATGTTTCCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp CTTCACTCTCACTCGAAGACATTGCACTGCCTACACCATGGCCACATCTATCACAGCTGTGGTTCATTCTaGAGCAGCCAGCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: LHSHSKTLHCLHHGHIYHSCGSF*SSQLSI
Trigger: GATGCTGAGCTGGCTGCTCCAGAATGAACCACAGCT...GTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp TGCAGCCTGTGTACTGGTAGACAACACGTACACATACCACTGCTTTTCACAAAAGTGGTTCACAGGCCATaGCAGGGCGCCAGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: CSLCTGRQHVHIPLLFTKVVHRP*QGASCF
Trigger: GAAACAGCTGGCGCCCTGCCATGGCCTGTGAACCAC...TTTTGTGAAAAGCAGTGGTATGTGTACGTGTTGTCTACCAGTACACAGGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp TTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCCACGTGGTTCACAGGCCATaGCAGGGCGCCAGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: FGKQFAKAAVGMAKQSIHVVHRP*QGASCF
Trigger: GAAACAGCTGGCGCCCTGCCATGGCCTGTGAACCAC...GTGGATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp TGCAGCCTGTGTACTGGTAGACAACACGTACACATACCACTGCTTTTCACAAAAAGGACCTGGCCATTGTaGAGCTCTTGCCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: CSLCTGRQHVHIPLLFTKRTWPL*SSCPQP
Trigger: TGGCTGGGGGCAAGAGCTCCACAATGGCCAGGTCCT...TTTTGTGAAAAGCAGTGGTATGTGTACGTGTTGTCTACCAGTACACAGGCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp ATTACACAGCTTGAAGTGGCAGATCAGGTCCAGAACCCAGGTCCACAGCAATGTAGAACAGTGAGGACCTaGCCATTGTGGAGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: ITQLEVADQVQNPGPQQCRTVRT*PLWSSC
Trigger: GCAAGAGCTCCACAATGGCCAGGTCCTCACTGTTCT...ACATTGCTGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp CCAGGCAAAGAAAGCAACTTGCCAAAAATTACACAGCTTGAAGTGGCAGATCAGTCAGGAGGGCTCCATTaGCAGCTGCCAGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: PGKESNLPKITQLEVADQSGGLH*QLPASG
Trigger: ACCTGAGGCTGGCAGCTGCCAATGGAGCCCTCCTGA...CTGATCTGCCACTTCAAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp CCAGGCAAAGAAAGCAACTTGCCAAAAATTACACAGCTTGAAGTGGCAGATCAGCCTGGGGCTCCCCATTaGCCATCTTGGGCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: PGKESNLPKITQLEVADQPGAPH*PSWAPE
Trigger: TTCAGGAGCCCAAGATGGCCAATGGGGAGCCCCAGG...CTGATCTGCCACTTCAAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp ACAAGGATTTTTGTGCTGGGCCCTGAAGTGAGCACAACACCCCAGTGGCTGACAAAGCTGCTGTGGGGATaGCAAAGCAATCAATCCACA +
Preference number: 4 (lower is better)
Translates to: TRIFVLGPEVSTTPQWLTKLLWG*QSNQST
Trigger: TGTGGATTGATTGCTTTGCCATCCCCACAGCAGCTT...TGTCAGCCACTGGGGTGTTGTGCTCACTTCAGGGCCCAGCACAAAAATCCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp TCAGAAAGGTTAAGTGACTTAGCCAAGGTCACACAACTTGGAAGCAGCAGATCAGTAATCCCAGCACTTTaGGAGCCCGAGGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SERLSDLAKVTQLGSSRSVIPAL*EPEAGG
Trigger: TCCACCCGCCTCGGGCTCCCAAAGTGCTGGGATTAC...TGATCTGCTGCTTCCAAGTTGTGTGACCTTGGCTAAGTCACTTAACCTTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp GTTCAGGAGCAGATCACTTGGAAGCCTCTGAGCTCTTCAAAGAATTCCACAAGTCAATCCGGAGAACAGTaGGGACCTGGCCATTGTGGA +
Preference number: 4 (lower is better)
Translates to: VQEQITWKPLSSSKNSTSQSGEQ*GPGHCG
Trigger: TCCACAATGGCCAGGTCCTCACTGTTCTCCGGATTG...ACTTGTGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp TTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCCACATTGTGGGCATACCCTaGAAGCCCCACCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: FGKQFAKAAVGMAKQSIHIVGIP*KPHPPG
Trigger: ACCTGGTGGGTGGGGCTTTCAGGGTATGCCCACAAT...GTGGATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp AGAATTCCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGTTGCAGTTGCTCTTCTaGGGCTCCCAGGTCGAAGGA +
Preference number: 4 (lower is better)
Translates to: RIPQVADHTSFQDNVHVGLQLLF*GSQVEG
Trigger: TCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAA...CCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGGAATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp TTTCCTCTGTGCCAGGTCAGAAAGACAGTGGTCACCTTCGTGAATAATTTCCTTCCCCAAGTTTGCAGTTaGTCTTCTGCGGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: FPLCQVRKTVVTFVNNFLPQVCS*SSAAPR
Trigger: CCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGGGG...AAGGAAATTATTCACGAAGGTGACCACTGTCTTTCTGACCTGGCACAGAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp GGTCAGACTCATCTCTTGAATGGCAAGCCACGTGTTTATTACATTTCTTGTTCAGGGTCACGAGCAGCATaGCAGCCCAGTGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GQTHLLNGKPRVYYISCSGSRAA*QPSGSP
Trigger: TGGGGAACCACTGGGCTGGCATGCTGCTCGTGACCC...TGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp GGTCAGACTCATCTCTTGAATGGCAAGCCACGTGTTTATTACATTTCTTGTTCAGTAGCCGCCAAACACTaGCAGCAGCTGGCGGGCCAT +
Preference number: 4 (lower is better)
Translates to: GQTHLLNGKPRVYYISCSVAAKH*QQLAGH
Trigger: ATGGCCCGCCAGCTGCTGGCAGTGTTTGGCGGCTAC...TGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp CATCATCTGAGGCCAAGTTTTGGACACATAATTTGCCCAGTCTGGTCATCTTCACCGGGACCTGCTGGATaGCCCAAGTTTGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: HHLRPSFGHIICPVWSSSPGPAG*PKFAVA
Trigger: AGCAACTGCAAACTTGGGGCATCCAGCAGGTCCCGG...TGAAGATGACCAGACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374049.4
CDS-3UTR CCA 90 bp CTTCACTCTCACTCGAAGACATTGCACTGCCTACACCATGGCCACATCTATCACGGTCCGTGTTGGTGTTaGCCTTCTTCTGGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: LHSHSKTLHCLHHGHIYHGPCWC*PSSGVF
Trigger: AAAGACACCAGAAGAAGGCCAACACCAACACGGACC...GTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GTTCAGGAGCAGATCACTTGGAAGCCTCTGAGCTCTTCAAAGAATTCCACAAGTGCCTCAGGTCCGTGTTaGTGTTGGCCTTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: VQEQITWKPLSSSKNSTSASGPC*CWPSSG
Trigger: ACCAGAAGAAGGCCAACACCAACACGGACCTGAGGC...ACTTGTGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp ACAAGGATTTTTGTGCTGGGCCCTGAAGTGAGCACAACACCCCAGTGGCTGACAATGACAACACACAACTaGCTCAATCTGCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: TRIFVLGPEVSTTPQWLTMTTHN*LNLLLS
Trigger: GCTGAGAAGCAGATTGAGCCAGTTGTGTGTTGTCAT...TGTCAGCCACTGGGGTGTTGTGCTCACTTCAGGGCCCAGCACAAAAATCCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp CCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGAAACATGAGCTGGCAGGGGCATaGAATTCTCGGAGAGTTCGT +
Preference number: 4 (lower is better)
Translates to: PQVADHTSFQDNVHVGKHELAGA*NSRRVR
Trigger: ACGAACTCTCCGAGAATTCCATGCCCCTGCCAGCTC...ATGTTTCCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp TTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCCACAGCACAACACCCCAGTaGCTGACATCACAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: FGKQFAKAAVGMAKQSIHSTTPQ*LTSQAP
Trigger: AGGGGCCTGTGATGTCAGCCACTGGGGTGTTGTGCT...GTGGATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTCTAGGTCTTGGGGGCTaGGGATCCTTTAGATGCGTT +
Preference number: 4 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGLGLGG*GSFRCV
Trigger: AACGCATCTAAAGGATCCCCAGCCCCCAAGACCTAG...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp TTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCCACTCAGCCGGGACCTGCTaGATGCCCCAAGTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: FGKQFAKAAVGMAKQSIHSAGTC*MPQVCS
Trigger: ACTGCAAACTTGGGGCATCCAGCAGGTCCCGGCTGA...GTGGATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374049.4
CDS-3UTR TCA 90 bp GTGTGTAGTATGCGATCTTCACAGCAACCCTGTAAAGTAGGTGAGACAGAGATCTCACCCCAGTCTCCATaGCAACACACAACTGGCTCA +
Preference number: 4 (lower is better)
Translates to: VCSMRSSQQPCKVGETEISPQSP*QHTTGS
Trigger: TGAGCCAGTTGTGTGTTGTCATGGAGACTGGGGTGA...GATCTCTGTCTCACCTACTTTACAGGGTTGCTGTGAAGATCGCATACTACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp AGAATTCCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGTCACCCCAGTCTCCATaGCAACACACAACTGGCTCA +
Preference number: 4 (lower is better)
Translates to: RIPQVADHTSFQDNVHVGSPQSP*QHTTGS
Trigger: TGAGCCAGTTGTGTGTTGTCATGGAGACTGGGGTGA...CCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGGAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp TTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCCACGGATGTAGGCTTCTATaGGCTGGCAGGGGCATGGAA +
Preference number: 4 (lower is better)
Translates to: FGKQFAKAAVGMAKQSIHGCRLL*AGRGME
Trigger: TTCCATGCCCCTGCCAGCTCATAGAAGCCTACATCC...GTGGATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp TGCAGCCTGTGTACTGGTAGACAACACGTACACATACCACTGCTTTTCACAAAAGGATGTAGGCTTCTATaGGCTGGCAGGGGCATGGAA +
Preference number: 4 (lower is better)
Translates to: CSLCTGRQHVHIPLLFTKGCRLL*AGRGME
Trigger: TTCCATGCCCCTGCCAGCTCATAGAAGCCTACATCC...TTTTGTGAAAAGCAGTGGTATGTGTACGTGTTGTCTACCAGTACACAGGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp ATTACACAGCTTGAAGTGGCAGATCAGGTCCAGAACCCAGGTCCACAGCAATGTCTGACTGCTCAGTCTTaGAGGAAGATGAGTACCTTC +
Preference number: 4 (lower is better)
Translates to: ITQLEVADQVQNPGPQQCLTAQS*RKMSTF
Trigger: GAAGGTACTCATCTTCCTTCAAGACTGAGCAGTCAG...ACATTGCTGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp TTTCCTCTGTGCCAGGTCAGAAAGACAGTGGTCACCTTCGTGAATAATTTCCTTTTTTGTGCTGGGCCCTaGAGTGAGCACAACACCCCA +
Preference number: 4 (lower is better)
Translates to: FPLCQVRKTVVTFVNNFLFCAGP*SEHNTP
Trigger: TGGGGTGTTGTGCTCACTTCAGGGCCCAGCACAAAA...AAGGAAATTATTCACGAAGGTGACCACTGTCTTTCTGACCTGGCACAGAGGAAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp ATTACACAGCTTGAAGTGGCAGATCAGGTCCAGAACCCAGGTCCACAGCAATGTGTCAGACTCATCTCTTaGATGGCAAGCCACGTGTTT +
Preference number: 4 (lower is better)
Translates to: ITQLEVADQVQNPGPQQCVRLIS*MASHVF
Trigger: AAACACGTGGCTTGCCATTCAAGAGATGAGTCTGAC...ACATTGCTGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp CTTCACTCTCACTCGAAGACATTGCACTGCCTACACCATGGCCACATCTATCACCTGGCACACAGAAAGTaGATGGTCAGACTCATCTCT +
Preference number: 4 (lower is better)
Translates to: LHSHSKTLHCLHHGHIYHLAHRK*MVRLIS
Trigger: AGAGATGAGTCTGACCATTCACTTTCTGTGTGCCAG...GTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp TCAGAAAGGTTAAGTGACTTAGCCAAGGTCACACAACTTGGAAGCAGCAGATCAAGCTGCTCTCAGCCTTaGCCAAAGCAGCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: SERLSDLAKVTQLGSSRSSCSQP*PKQPFQ
Trigger: CTGGAAAGGCTGCTTTGGTCAAGGCTGAGAGCAGCT...TGATCTGCTGCTTCCAAGTTGTGTGACCTTGGCTAAGTCACTTAACCTTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp CCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGAAACATTGGATGCCCCAAGTTTaGAGTTGCTCTTCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: PQVADHTSFQDNVHVGKHWMPQV*SCSSAA
Trigger: AGCCGCAGAAGAGCAACTGCAAACTTGGGGCATCCA...ATGTTTCCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp AGAATTCCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGCTCACTCGAAGACATTaGACTGCCTACACCATGGCC +
Preference number: 4 (lower is better)
Translates to: RIPQVADHTSFQDNVHVGLTRRH*TAYTMA
Trigger: GGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAG...CCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGGAATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GTTCAGGAGCAGATCACTTGGAAGCCTCTGAGCTCTTCAAAGAATTCCACAAGTAGCTGTGGTTCATTCTaGAGCAGCCAGCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: VQEQITWKPLSSSKNSTSSCGSF*SSQLSI
Trigger: GATGCTGAGCTGGCTGCTCCAGAATGAACCACAGCT...ACTTGTGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp CTGACTGAGAAATACGGGCTTCTTTCTATTGGTCACATTCACAGCCAACATTTCTGGTCAGCCGGGACCTaGATGCCCCAAGTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: LTEKYGLLSIGHIHSQHFWSAGT*MPQVCS
Trigger: ACTGCAAACTTGGGGCATCCAGGTCCCGGCTGACCA...GAAATGTTGGCTGTGAATGTGACCAATAGAAAGAAGCCCGTATTTCTCAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288502.9
CDS-3UTR CCA 90 bp TCAGAAAGGTTAAGTGACTTAGCCAAGGTCACACAACTTGGAAGCAGCAGATCAGCCTCAGGTCCGTGTTaGTGTTGGCCTTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SERLSDLAKVTQLGSSRSASGPC*CWPSSG
Trigger: ACCAGAAGAAGGCCAACACCAACACGGACCTGAGGC...TGATCTGCTGCTTCCAAGTTGTGTGACCTTGGCTAAGTCACTTAACCTTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp ATTACACAGCTTGAAGTGGCAGATCAGGTCCAGAACCCAGGTCCACAGCAATGTAGTCTTGAAGGAAGATaGGTACCTTCATCCCTAGGT +
Preference number: 4 (lower is better)
Translates to: ITQLEVADQVQNPGPQQCSLEGR*VPSSLG
Trigger: ACCTAGGGATGAAGGTACTCATCTTCCTTCAAGACT...ACATTGCTGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp TGCAGCCTGTGTACTGGTAGACAACACGTACACATACCACTGCTTTTCACAAAACTCCTGAAGCCTTCCTaGCTGCTCAGTCTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: CSLCTGRQHVHIPLLFTKLLKPS*LLSLEG
Trigger: TCCTTCAAGACTGAGCAGTCAGGAAGGCTTCAGGAG...TTTTGTGAAAAGCAGTGGTATGTGTACGTGTTGTCTACCAGTACACAGGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTCTGGCACACAGAAAGTaGATGGTCAGACTCATCTCT +
Preference number: 4 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGLAHRK*MVRLIS
Trigger: AGAGATGAGTCTGACCATTCACTTTCTGTGTGCCAG...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp CCAGGCAAAGAAAGCAACTTGCCAAAAATTACACAGCTTGAAGTGGCAGATCAGTGGATGCCCCAAGTTTaGAGTTGCTCTTCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: PGKESNLPKITQLEVADQWMPQV*SCSSAA
Trigger: AGCCGCAGAAGAGCAACTGCAAACTTGGGGCATCCA...CTGATCTGCCACTTCAAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp ATTACACAGCTTGAAGTGGCAGATCAGGTCCAGAACCCAGGTCCACAGCAATGTACAACTGGCTCAATCTaGTTCTCAGCAAGGACTCTT +
Preference number: 4 (lower is better)
Translates to: ITQLEVADQVQNPGPQQCTTGSI*FSARTL
Trigger: AAGAGTCCTTGCTGAGAAGCAGATTGAGCCAGTTGT...ACATTGCTGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp CTGACTGAGAAATACGGGCTTCTTTCTATTGGTCACATTCACAGCCAACATTTCACGGGCAGCACCCTGTaGCTAGGATGTAGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: LTEKYGLLSIGHIHSQHFTGSTL*LGCRLL
Trigger: TAGAAGCCTACATCCTAGGCACAGGGTGCTGCCCGT...GAAATGTTGGCTGTGAATGTGACCAATAGAAAGAAGCCCGTATTTCTCAGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTAGGGGTTCAAGGCAATaGCACATAGAGCAGTATCCT +
Preference number: 4 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGRGSRQ*HIEQYP
Trigger: AGGATACTGCTCTATGTGGCATTGCCTTGAACCCCT...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp ATTACACAGCTTGAAGTGGCAGATCAGGTCCAGAACCCAGGTCCACAGCAATGTTGGGGATCCTTTAGATaGGTTTGGTCTTGGGTCTAT +
Preference number: 4 (lower is better)
Translates to: ITQLEVADQVQNPGPQQCWGSFR*VWSWVY
Trigger: ATAGACCCAAGACCAAACGCATCTAAAGGATCCCCA...ACATTGCTGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp CTTCACTCTCACTCGAAGACATTGCACTGCCTACACCATGGCCACATCTATCACTTCCTGTGTGTAGTATaGGATCTTCACAGCAACCCT +
Preference number: 4 (lower is better)
Translates to: LHSHSKTLHCLHHGHIYHFLCVV*DLHSNP
Trigger: AGGGTTGCTGTGAAGATCGCATACTACACACAGGAA...GTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp TTTCCTCTGTGCCAGGTCAGAAAGACAGTGGTCACCTTCGTGAATAATTTCCTTCTCACTCGAAGACATTaGACTGCCTACACCATGGCC +
Preference number: 4 (lower is better)
Translates to: FPLCQVRKTVVTFVNNFLLTRRH*TAYTMA
Trigger: GGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAG...AAGGAAATTATTCACGAAGGTGACCACTGTCTTTCTGACCTGGCACAGAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp CATCATCTGAGGCCAAGTTTTGGACACATAATTTGCCCAGTCTGGTCATCTTCACCCTTCTCAGAGCTGTaGTTCATTCTGGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: HHLRPSFGHIICPVWSSSPFSEL*FILEQP
Trigger: TGGCTGCTCCAGAATGAACCACAGCTCTGAGAAGGG...TGAAGATGACCAGACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGATGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GAGTTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCAGAACAGTGAGGACCTaGCCATTGTGGAGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: EFGKQFAKAAVGMAKQSIRTVRT*PLWSSC
Trigger: GCAAGAGCTCCACAATGGCCAGGTCCTCACTGTTCT...GATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GTGTGTAGTATGCGATCTTCACAGCAACCCTGTAAAGTAGGTGAGACAGAGATCCCAGGTCGAAGGAGATaGGTGCACAGGTATTGTCAA +
Preference number: 4 (lower is better)
Translates to: VCSMRSSQQPCKVGETEIPGRRR*VHRYCQ
Trigger: TTGACAATACCTGTGCACCCATCTCCTTCGACCTGG...GATCTCTGTCTCACCTACTTTACAGGGTTGCTGTGAAGATCGCATACTACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTATATATCTTCTCACTTaGGGCTCCAAGAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGIYLLT*GSKRAL
Trigger: GAGTGCCCTCTTGGAGCCCCAAGTGAGAAGATATAT...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp CTGACTGAGAAATACGGGCTTCTTTCTATTGGTCACATTCACAGCCAACATTTCAGCATGCCAGCCCAGTaGTTCCCCAAGGCAAACATC +
Preference number: 4 (lower is better)
Translates to: LTEKYGLLSIGHIHSQHFSMPAQ*FPKANI
Trigger: GATGTTTGCCTTGGGGAACCACTGGGCTGGCATGCT...GAAATGTTGGCTGTGAATGTGACCAATAGAAAGAAGCCCGTATTTCTCAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTGTGTTGGCCTTCTTCTaGTGTCTTTCAAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGVLAFF*CLSKTS
Trigger: GCTGGTCTTTGAAAGACACCAGAAGAAGGCCAACAC...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GTGTGTAGTATGCGATCTTCACAGCAACCCTGTAAAGTAGGTGAGACAGAGATCCTCAGTTTCCCCATCTaGCATGAAGGGGTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: VCSMRSSQQPCKVGETEILSFPI*HEGVGD
Trigger: ATCTCCAACCCCTTCATGCCAGATGGGGAAACTGAG...GATCTCTGTCTCACCTACTTTACAGGGTTGCTGTGAAGATCGCATACTACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp CCAGGCAAAGAAAGCAACTTGCCAAAAATTACACAGCTTGAAGTGGCAGATCAGCTAGGTCTTGGGGGCTaGGGATCCTTTAGATGCGTT +
Preference number: 4 (lower is better)
Translates to: PGKESNLPKITQLEVADQLGLGG*GSFRCV
Trigger: AACGCATCTAAAGGATCCCCAGCCCCCAAGACCTAG...CTGATCTGCCACTTCAAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GTGTGTAGTATGCGATCTTCACAGCAACCCTGTAAAGTAGGTGAGACAGAGATCAAGAATCATCCAGGCTaGTTGTGGTGCCTCACGTCT +
Preference number: 4 (lower is better)
Translates to: VCSMRSSQQPCKVGETEIKNHPG*LWCLTS
Trigger: AGACGTGAGGCACCACAACCAGCCTGGATGATTCTT...GATCTCTGTCTCACCTACTTTACAGGGTTGCTGTGAAGATCGCATACTACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GTTCAGGAGCAGATCACTTGGAAGCCTCTGAGCTCTTCAAAGAATTCCACAAGTAAGAATCATCCAGGCTaGTTGTGGTGCCTCACGTCT +
Preference number: 4 (lower is better)
Translates to: VQEQITWKPLSSSKNSTSKNHPG*LWCLTS
Trigger: AGACGTGAGGCACCACAACCAGCCTGGATGATTCTT...ACTTGTGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp AGAATTCCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGGTCATCTCAGCCATGTaGGGTTGCCAGATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: RIPQVADHTSFQDNVHVGVISAM*GCQMFL
Trigger: CAGAAACATCTGGCAACCCCACATGGCTGAGATGAC...CCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGGAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp ACAAGGATTTTTGTGCTGGGCCCTGAAGTGAGCACAACACCCCAGTGGCTGACAGACTCATCTCTTGAATaGCAAGCCACGTGTTTATTA +
Preference number: 4 (lower is better)
Translates to: TRIFVLGPEVSTTPQWLTDSSLE*QATCLL
Trigger: TAATAAACACGTGGCTTGCCATTCAAGAGATGAGTC...TGTCAGCCACTGGGGTGTTGTGCTCACTTCAGGGCCCAGCACAAAAATCCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp AGAATTCCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGAGCCTTTCCAGGGGCTaGTCTATACCCATGATCTCT +
Preference number: 4 (lower is better)
Translates to: RIPQVADHTSFQDNVHVGSLSRG*SIPMIS
Trigger: AGAGATCATGGGTATAGACCAGCCCCTGGAAAGGCT...CCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGGAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp GTTCAGGAGCAGATCACTTGGAAGCCTCTGAGCTCTTCAAAGAATTCCACAAGTCTGACTGCTCAGTCTTaGAGGAAGATGAGTACCTTC +
Preference number: 4 (lower is better)
Translates to: VQEQITWKPLSSSKNSTSLTAQS*RKMSTF
Trigger: GAAGGTACTCATCTTCCTTCAAGACTGAGCAGTCAG...ACTTGTGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp TTTCCTCTGTGCCAGGTCAGAAAGACAGTGGTCACCTTCGTGAATAATTTCCTTGCCAGGGGGTCAGCATaGGATGTCAAACAAGGATTT +
Preference number: 4 (lower is better)
Translates to: FPLCQVRKTVVTFVNNFLARGSA*DVKQGF
Trigger: AAATCCTTGTTTGACATCTCATGCTGACCCCCTGGC...AAGGAAATTATTCACGAAGGTGACCACTGTCTTTCTGACCTGGCACAGAGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp GAGTTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCGTCTCCTGGGTTCTCTaGACAATGAAAGCAATGGGG +
Preference number: 4 (lower is better)
Translates to: EFGKQFAKAAVGMAKQSIVSWVL*TMKAMG
Trigger: CCCCATTGCTTTCATTGTTCAGAGAACCCAGGAGAC...GATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp ATTACACAGCTTGAAGTGGCAGATCAGGTCCAGAACCCAGGTCCACAGCAATGTACAGTTATCTGCCCTTaGTCTCTTTCTTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: ITQLEVADQVQNPGPQQCTVICP*SLSSVS
Trigger: AGAGACAGAAGAAAGAGATCAAGGGCAGATAACTGT...ACATTGCTGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp CCAGGCAAAGAAAGCAACTTGCCAAAAATTACACAGCTTGAAGTGGCAGATCAGGTCGAAGGAGATGGGTaGACAGGTATTGTCAATCCG +
Preference number: 4 (lower is better)
Translates to: PGKESNLPKITQLEVADQVEGDG*TGIVNP
Trigger: CGGATTGACAATACCTGTGCACCCATCTCCTTCGAC...CTGATCTGCCACTTCAAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp GGTCAGACTCATCTCTTGAATGGCAAGCCACGTGTTTATTACATTTCTTGTTCAGTAACCATCAGCTTCTaGAAAGGCCAGGGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GQTHLLNGKPRVYYISCSVTISF*KGQGVS
Trigger: GCTGACCCCCTGGCCTTTGCAGAAGCTGATGGTTAC...TGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTCCACAACCACAAGCGTaGATGCCTGTGAACAAAATA +
Preference number: 4 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGPQPQA*MPVNKI
Trigger: TATTTTGTTCACAGGCATGCACGCTTGTGGTTGTGG...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp GTGTGTAGTATGCGATCTTCACAGCAACCCTGTAAAGTAGGTGAGACAGAGATCGCAATTTGCAAAAGCTaGTGTGGGGATGGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: VCSMRSSQQPCKVGETEIAICKS*CGDGKA
Trigger: TGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGC...GATCTCTGTCTCACCTACTTTACAGGGTTGCTGTGAAGATCGCATACTACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp GAGTTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCTCGAAGACATTGCACTaGCTACACCATGGCCACATC +
Preference number: 4 (lower is better)
Translates to: EFGKQFAKAAVGMAKQSISKTLH*LHHGHI
Trigger: GATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGA...GATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp TTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCCACCCAGGTCGAAGGAGATaGGTGCACAGGTATTGTCAA +
Preference number: 4 (lower is better)
Translates to: FGKQFAKAAVGMAKQSIHPGRRR*VHRYCQ
Trigger: TTGACAATACCTGTGCACCCATCTCCTTCGACCTGG...GTGGATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GGTCAGACTCATCTCTTGAATGGCAAGCCACGTGTTTATTACATTTCTTGTTCAAGCATGCCAGCCCAGTaGTTCCCCAAGGCAAACATC +
Preference number: 4 (lower is better)
Translates to: GQTHLLNGKPRVYYISCSSMPAQ*FPKANI
Trigger: GATGTTTGCCTTGGGGAACCACTGGGCTGGCATGCT...TGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp TCAGAAAGGTTAAGTGACTTAGCCAAGGTCACACAACTTGGAAGCAGCAGATCAGGTCCGTGTTGGTGTTaGCCTTCTTCTGGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: SERLSDLAKVTQLGSSRSGPCWC*PSSGVF
Trigger: AAAGACACCAGAAGAAGGCCAACACCAACACGGACC...TGATCTGCTGCTTCCAAGTTGTGTGACCTTGGCTAAGTCACTTAACCTTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp TTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCCACCTCAGTCTGCATGAGTaGCCTCTCGTTAGGACAAGA +
Preference number: 4 (lower is better)
Translates to: FGKQFAKAAVGMAKQSIHLSLHE*PLVRTR
Trigger: TCTTGTCCTAACGAGAGGCCACTCATGCAGACTGAG...GTGGATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp CCAGGCAAAGAAAGCAACTTGCCAAAAATTACACAGCTTGAAGTGGCAGATCAGCTCAGTCTGCATGAGTaGCCTCTCGTTAGGACAAGA +
Preference number: 4 (lower is better)
Translates to: PGKESNLPKITQLEVADQLSLHE*PLVRTR
Trigger: TCTTGTCCTAACGAGAGGCCACTCATGCAGACTGAG...CTGATCTGCCACTTCAAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GGTCAGACTCATCTCTTGAATGGCAAGCCACGTGTTTATTACATTTCTTGTTCAGAGCTGGCAGGGGCATaGAATTCTCGGAGAGTTCGT +
Preference number: 4 (lower is better)
Translates to: GQTHLLNGKPRVYYISCSELAGA*NSRRVR
Trigger: ACGAACTCTCCGAGAATTCCATGCCCCTGCCAGCTC...TGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GAGTTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCCTCAGTTTCCCCATCTaGCATGAAGGGGTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: EFGKQFAKAAVGMAKQSILSFPI*HEGVGD
Trigger: ATCTCCAACCCCTTCATGCCAGATGGGGAAACTGAG...GATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp ACAAGGATTTTTGTGCTGGGCCCTGAAGTGAGCACAACACCCCAGTGGCTGACAAGATGTTTCTGCATGTaGATAAAGATAGATAGGCCA +
Preference number: 4 (lower is better)
Translates to: TRIFVLGPEVSTTPQWLTRCFCM*IKIDRP
Trigger: TGGCCTATCTATCTTTATCCACATGCAGAAACATCT...TGTCAGCCACTGGGGTGTTGTGCTCACTTCAGGGCCCAGCACAAAAATCCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp TTTCCTCTGTGCCAGGTCAGAAAGACAGTGGTCACCTTCGTGAATAATTTCCTTGTCATCTCAGCCATGTaGGGTTGCCAGATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: FPLCQVRKTVVTFVNNFLVISAM*GCQMFL
Trigger: CAGAAACATCTGGCAACCCCACATGGCTGAGATGAC...AAGGAAATTATTCACGAAGGTGACCACTGTCTTTCTGACCTGGCACAGAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp CCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGAAACATCAAGGTCACACAACTTaGAAGCAGCAGATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PQVADHTSFQDNVHVGKHQGHTT*KQQIRK
Trigger: CTTCCTGATCTGCTGCTTCCAAGTTGTGTGACCTTG...ATGTTTCCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp CCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGAAACATGAGAAATGTACATTGTaGGCATACCCTGAAAGCCCC +
Preference number: 4 (lower is better)
Translates to: PQVADHTSFQDNVHVGKHEKCTL*AYPESP
Trigger: GGGGCTTTCAGGGTATGCCCACAATGTACATTTCTC...ATGTTTCCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR CAA 72 bp ATGAGGGGGCAGAATAAGCTAGAAATTCCCAGAACTTaGGTCCTAGAAGGGCCCTTAAGAATCATCCAGGCT +
Preference number: 4 (lower is better)
Translates to: MRGQNKLEIPRT*VLEGPLRIIQA
Trigger: AGCCTGGATGATTCTTAAGGGCCCTTCTAGGACCAAAGTTCTGGGAATTTCTAGCTTATTCTGCCCCCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp CCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGAAACATAGTCTTGAAGGAAGATaGGTACCTTCATCCCTAGGT +
Preference number: 4 (lower is better)
Translates to: PQVADHTSFQDNVHVGKHSLEGR*VPSSLG
Trigger: ACCTAGGGATGAAGGTACTCATCTTCCTTCAAGACT...ATGTTTCCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp GAGTTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCGGGTTTTGTGGGAGATaGAGCCAAAATCGCAGACAA +
Preference number: 4 (lower is better)
Translates to: EFGKQFAKAAVGMAKQSIGFCGR*SQNRRQ
Trigger: TTGTCTGCGATTTTGGCTTCATCTCCCACAAAACCC...GATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp CATCATCTGAGGCCAAGTTTTGGACACATAATTTGCCCAGTCTGGTCATCTTCAGTCCAGGAAAGAGCGTaGACTCATAAAGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: HHLRPSFGHIICPVWSSSVQERA*THKGVL
Trigger: CAAAACCCCTTTATGAGTTCACGCTCTTTCCTGGAC...TGAAGATGACCAGACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp TCAGAAAGGTTAAGTGACTTAGCCAAGGTCACACAACTTGGAAGCAGCAGATCAGTCCAGGAAAGAGCGTaGACTCATAAAGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: SERLSDLAKVTQLGSSRSVQERA*THKGVL
Trigger: CAAAACCCCTTTATGAGTTCACGCTCTTTCCTGGAC...TGATCTGCTGCTTCCAAGTTGTGTGACCTTGGCTAAGTCACTTAACCTTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTCAGTGGTCACCTTCGTaGATAATTTCCTTGAGCAAA +
Preference number: 4 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGQWSPS*IISLSK
Trigger: TTTGCTCAAGGAAATTATTCACGAAGGTGACCACTG...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp CCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGAAACATACAACTGGCTCAATCTaGTTCTCAGCAAGGACTCTT +
Preference number: 4 (lower is better)
Translates to: PQVADHTSFQDNVHVGKHTTGSI*FSARTL
Trigger: AAGAGTCCTTGCTGAGAAGCAGATTGAGCCAGTTGT...ATGTTTCCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp GAGTTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCAGGGGTTCAAGGCAATaGCACATAGAGCAGTATCCT +
Preference number: 4 (lower is better)
Translates to: EFGKQFAKAAVGMAKQSIRGSRQ*HIEQYP
Trigger: AGGATACTGCTCTATGTGGCATTGCCTTGAACCCCT...GATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp ATTACACAGCTTGAAGTGGCAGATCAGGTCCAGAACCCAGGTCCACAGCAATGTACGTACACATACCACTaGTTTTCACAAAATATGGGG +
Preference number: 4 (lower is better)
Translates to: ITQLEVADQVQNPGPQQCTYTYH*FSQNMG
Trigger: CCCCATATTTTGTGAAAAGCAGTGGTATGTGTACGT...ACATTGCTGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp TTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCCACTCTGTCTCTGTCTTCTaGAGCCTGTGTACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: FGKQFAKAAVGMAKQSIHSVSVF*SLCTGR
Trigger: TCTACCAGTACACAGGCTGCAGAAGACAGAGACAGA...GTGGATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp TGCAGCCTGTGTACTGGTAGACAACACGTACACATACCACTGCTTTTCACAAAACCAACATTTCCTCTGTaGCAGGTCAGAAAGACAGTG +
Preference number: 4 (lower is better)
Translates to: CSLCTGRQHVHIPLLFTKPTFPL*QVRKTV
Trigger: CACTGTCTTTCTGACCTGGCACAGAGGAAATGTTGG...TTTTGTGAAAAGCAGTGGTATGTGTACGTGTTGTCTACCAGTACACAGGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp CTCAAGTCAAACAGGATCAATCTTTCTCAAATATTCCTATCAACAGTTATCTGCGCCAAGCTCCTGTACTaGTCAGCCGGGACCTGGATG +
Preference number: 4 (lower is better)
Translates to: LKSNRINLSQIFLSTVICAKLLY*SAGTWM
Trigger: CATCCAGGTCCCGGCTGACCAGTACAGGAGCTTGGC...GCAGATAACTGTTGATAGGAATATTTGAGAAAGATTGATCCTGTTTGACTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288502.9
CDS-3UTR CCA 90 bp CCAGGCAAAGAAAGCAACTTGCCAAAAATTACACAGCTTGAAGTGGCAGATCAGATATATCTTCTCACTTaGGGCTCCAAGAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: PGKESNLPKITQLEVADQIYLLT*GSKRAL
Trigger: GAGTGCCCTCTTGGAGCCCCAAGTGAGAAGATATAT...CTGATCTGCCACTTCAAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp TCAGAAAGGTTAAGTGACTTAGCCAAGGTCACACAACTTGGAAGCAGCAGATCAGTGTTGGCCTTCTTCTaGTGTCTTTCAAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: SERLSDLAKVTQLGSSRSVLAFF*CLSKTS
Trigger: GCTGGTCTTTGAAAGACACCAGAAGAAGGCCAACAC...TGATCTGCTGCTTCCAAGTTGTGTGACCTTGGCTAAGTCACTTAACCTTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp CTCAAGTCAAACAGGATCAATCTTTCTCAAATATTCCTATCAACAGTTATCTGCGCTTCTCTCCTCACCTaGGGCTCCCCATTGGCCATC +
Preference number: 4 (lower is better)
Translates to: LKSNRINLSQIFLSTVICASLLT*GSPLAI
Trigger: GATGGCCAATGGGGAGCCCCAGGTGAGGAGAGAAGC...GCAGATAACTGTTGATAGGAATATTTGAGAAAGATTGATCCTGTTTGACTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTATAATTTGCCCAGTCTaGTCATCTTCATGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGIICPV*SSSCLL
Trigger: CAGGAGACATGAAGATGACCAGACTGGGCAAATTAT...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp ATTACACAGCTTGAAGTGGCAGATCAGGTCCAGAACCCAGGTCCACAGCAATGTAAAGAATTCCACAAGTaGCTGATCACACTTCATTCC +
Preference number: 4 (lower is better)
Translates to: ITQLEVADQVQNPGPQQCKEFHK*LITLHS
Trigger: GGAATGAAGTGTGATCAGCCACTTGTGGAATTCTTT...ACATTGCTGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp CCAGGCAAAGAAAGCAACTTGCCAAAAATTACACAGCTTGAAGTGGCAGATCAGTTACACAGCTTGAAGTaGCAGATCAGGTCCAGAACC +
Preference number: 4 (lower is better)
Translates to: PGKESNLPKITQLEVADQLHSLK*QIRSRT
Trigger: GGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAA...CTGATCTGCCACTTCAAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp CATCATCTGAGGCCAAGTTTTGGACACATAATTTGCCCAGTCTGGTCATCTTCACAAGGTCACACAACTTaGAAGCAGCAGATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: HHLRPSFGHIICPVWSSSQGHTT*KQQIRK
Trigger: CTTCCTGATCTGCTGCTTCCAAGTTGTGTGACCTTG...TGAAGATGACCAGACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp TCAGAAAGGTTAAGTGACTTAGCCAAGGTCACACAACTTGGAAGCAGCAGATCAGCCTCGAGTTGTAGATaGTATATCTTCTCACTTGGG +
Preference number: 4 (lower is better)
Translates to: SERLSDLAKVTQLGSSRSASSCR*YIFSLG
Trigger: CCCAAGTGAGAAGATATATCATCTACAACTCGAGGC...TGATCTGCTGCTTCCAAGTTGTGTGACCTTGGCTAAGTCACTTAACCTTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp CATCATCTGAGGCCAAGTTTTGGACACATAATTTGCCCAGTCTGGTCATCTTCATCACTTGGAAGCCTCTaGGCTCTTCAAAGAATTCCA +
Preference number: 4 (lower is better)
Translates to: HHLRPSFGHIICPVWSSSSLGSL*ALQRIP
Trigger: TGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGA...TGAAGATGACCAGACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp GAGTTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCTCACTTGGAAGCCTCTaGGCTCTTCAAAGAATTCCA +
Preference number: 4 (lower is better)
Translates to: EFGKQFAKAAVGMAKQSISLGSL*ALQRIP
Trigger: TGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGA...GATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTTTGGTCTTGGGTCTATaGAACAATAGGTCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGLVLGL*NNRSSN
Trigger: GTTTGAAGACCTATTGTTTCATAGACCCAAGACCAA...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp GTGTGTAGTATGCGATCTTCACAGCAACCCTGTAAAGTAGGTGAGACAGAGATCCAGTGGTCACCTTCGTaGATAATTTCCTTGAGCAAA +
Preference number: 4 (lower is better)
Translates to: VCSMRSSQQPCKVGETEIQWSPS*IISLSK
Trigger: TTTGCTCAAGGAAATTATTCACGAAGGTGACCACTG...GATCTCTGTCTCACCTACTTTACAGGGTTGCTGTGAAGATCGCATACTACACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp CTGACTGAGAAATACGGGCTTCTTTCTATTGGTCACATTCACAGCCAACATTTCTCTGTCTCTGTCTTCTaGAGCCTGTGTACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: LTEKYGLLSIGHIHSQHFSVSVF*SLCTGR
Trigger: TCTACCAGTACACAGGCTGCAGAAGACAGAGACAGA...GAAATGTTGGCTGTGAATGTGACCAATAGAAAGAAGCCCGTATTTCTCAGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp CATCATCTGAGGCCAAGTTTTGGACACATAATTTGCCCAGTCTGGTCATCTTCACCACAACCACAAGCGTaGATGCCTGTGAACAAAATA +
Preference number: 4 (lower is better)
Translates to: HHLRPSFGHIICPVWSSSPQPQA*MPVNKI
Trigger: TATTTTGTTCACAGGCATGCACGCTTGTGGTTGTGG...TGAAGATGACCAGACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp CTGACTGAGAAATACGGGCTTCTTTCTATTGGTCACATTCACAGCCAACATTTCGCAATTTGCAAAAGCTaGTGTGGGGATGGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: LTEKYGLLSIGHIHSQHFAICKS*CGDGKA
Trigger: TGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGC...GAAATGTTGGCTGTGAATGTGACCAATAGAAAGAAGCCCGTATTTCTCAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp CTGACTGAGAAATACGGGCTTCTTTCTATTGGTCACATTCACAGCCAACATTTCCCAACATTTCCTCTGTaGCAGGTCAGAAAGACAGTG +
Preference number: 4 (lower is better)
Translates to: LTEKYGLLSIGHIHSQHFPTFPL*QVRKTV
Trigger: CACTGTCTTTCTGACCTGGCACAGAGGAAATGTTGG...GAAATGTTGGCTGTGAATGTGACCAATAGAAAGAAGCCCGTATTTCTCAGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GAGTTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCATGACAACACACAACTaGCTCAATCTGCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: EFGKQFAKAAVGMAKQSIMTTHN*LNLLLS
Trigger: GCTGAGAAGCAGATTGAGCCAGTTGTGTGTTGTCAT...GATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GTTCAGGAGCAGATCACTTGGAAGCCTCTGAGCTCTTCAAAGAATTCCACAAGTATAATTTGCCCAGTCTaGTCATCTTCATGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: VQEQITWKPLSSSKNSTSIICPV*SSSCLL
Trigger: CAGGAGACATGAAGATGACCAGACTGGGCAAATTAT...ACTTGTGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp TTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCCACTTGCAAAAGCTGCTGTaGGGATGGCAAAGCAATCAA +
Preference number: 4 (lower is better)
Translates to: FGKQFAKAAVGMAKQSIHLQKLL*GWQSNQ
Trigger: TTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAA...GTGGATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GAGTTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCTTGCAAAAGCTGCTGTaGGGATGGCAAAGCAATCAA +
Preference number: 4 (lower is better)
Translates to: EFGKQFAKAAVGMAKQSILQKLL*GWQSNQ
Trigger: TTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAA...GATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GGTCAGACTCATCTCTTGAATGGCAAGCCACGTGTTTATTACATTTCTTGTTCAAGCCTTTCCAGGGGCTaGTCTATACCCATGATCTCT +
Preference number: 4 (lower is better)
Translates to: GQTHLLNGKPRVYYISCSSLSRG*SIPMIS
Trigger: AGAGATCATGGGTATAGACCAGCCCCTGGAAAGGCT...TGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp CATCATCTGAGGCCAAGTTTTGGACACATAATTTGCCCAGTCTGGTCATCTTCAACAGTTATCTGCCCTTaGTCTCTTTCTTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: HHLRPSFGHIICPVWSSSTVICP*SLSSVS
Trigger: AGAGACAGAAGAAAGAGATCAAGGGCAGATAACTGT...TGAAGATGACCAGACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp CATCATCTGAGGCCAAGTTTTGGACACATAATTTGCCCAGTCTGGTCATCTTCAAAAAATTACACAGCTTaGAGTGGCAGATCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: HHLRPSFGHIICPVWSSSKNYTA*SGRSGP
Trigger: TGGACCTGATCTGCCACTTCAAGCTGTGTAATTTTT...TGAAGATGACCAGACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGATGATG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp GAGTTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCAAAAATTACACAGCTTaGAGTGGCAGATCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: EFGKQFAKAAVGMAKQSIKNYTA*SGRSGP
Trigger: TGGACCTGATCTGCCACTTCAAGCTGTGTAATTTTT...GATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp GGTCAGACTCATCTCTTGAATGGCAAGCCACGTGTTTATTACATTTCTTGTTCAGTCAGACTCATCTCTTaGATGGCAAGCCACGTGTTT +
Preference number: 4 (lower is better)
Translates to: GQTHLLNGKPRVYYISCSVRLIS*MASHVF
Trigger: AAACACGTGGCTTGCCATTCAAGAGATGAGTCTGAC...TGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp CATCATCTGAGGCCAAGTTTTGGACACATAATTTGCCCAGTCTGGTCATCTTCACCTATAGATGAGGAATaGGACTCAATGAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: HHLRPSFGHIICPVWSSSPIDEE*DSMRGR
Trigger: TCTTCCTCTCATTGAGTCTCATTCCTCATCTATAGG...TGAAGATGACCAGACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp TCAGAAAGGTTAAGTGACTTAGCCAAGGTCACACAACTTGGAAGCAGCAGATCACCTATAGATGAGGAATaGGACTCAATGAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SERLSDLAKVTQLGSSRSPIDEE*DSMRGR
Trigger: TCTTCCTCTCATTGAGTCTCATTCCTCATCTATAGG...TGATCTGCTGCTTCCAAGTTGTGTGACCTTGGCTAAGTCACTTAACCTTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp GAGTTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCTTCCCATCCTATAGATaGGGAATGAGACTCAATGAG +
Preference number: 4 (lower is better)
Translates to: EFGKQFAKAAVGMAKQSIFPSYR*GMRLNE
Trigger: CTCATTGAGTCTCATTCCTCATCTATAGGATGGGAA...GATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp TTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCCACTTCCCATCCTATAGATaGGGAATGAGACTCAATGAG +
Preference number: 4 (lower is better)
Translates to: FGKQFAKAAVGMAKQSIHFPSYR*GMRLNE
Trigger: CTCATTGAGTCTCATTCCTCATCTATAGGATGGGAA...GTGGATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp CTCAAGTCAAACAGGATCAATCTTTCTCAAATATTCCTATCAACAGTTATCTGCTTGCAGTTGCTCTTCTaGGGCTCCCAGGTCGAAGGA +
Preference number: 4 (lower is better)
Translates to: LKSNRINLSQIFLSTVICLQLLF*GSQVEG
Trigger: TCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAA...GCAGATAACTGTTGATAGGAATATTTGAGAAAGATTGATCCTGTTTGACTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp AGAATTCCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGACGTACACATACCACTaGTTTTCACAAAATATGGGG +
Preference number: 4 (lower is better)
Translates to: RIPQVADHTSFQDNVHVGTYTYH*FSQNMG
Trigger: CCCCATATTTTGTGAAAAGCAGTGGTATGTGTACGT...CCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGGAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp CTGACTGAGAAATACGGGCTTCTTTCTATTGGTCACATTCACAGCCAACATTTCTGGGGATCCTTTAGATaGGTTTGGTCTTGGGTCTAT +
Preference number: 4 (lower is better)
Translates to: LTEKYGLLSIGHIHSQHFWGSFR*VWSWVY
Trigger: ATAGACCCAAGACCAAACGCATCTAAAGGATCCCCA...GAAATGTTGGCTGTGAATGTGACCAATAGAAAGAAGCCCGTATTTCTCAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp TTTCCTCTGTGCCAGGTCAGAAAGACAGTGGTCACCTTCGTGAATAATTTCCTTAAACTGAGGCACAGATaGCGAGAAATGTACATTGTG +
Preference number: 4 (lower is better)
Translates to: FPLCQVRKTVVTFVNNFLKLRHR*REMYIV
Trigger: CACAATGTACATTTCTCGGCATCTGTGCCTCAGTTT...AAGGAAATTATTCACGAAGGTGACCACTGTCTTTCTGACCTGGCACAGAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp TCAGAAAGGTTAAGTGACTTAGCCAAGGTCACACAACTTGGAAGCAGCAGATCAAACCTGCCAGGTACATaGTCTTATTCCCATCCTATA +
Preference number: 4 (lower is better)
Translates to: SERLSDLAKVTQLGSSRSNLPGT*SYSHPI
Trigger: TATAGGATGGGAATAAGAGCATGTACCTGGCAGGTT...TGATCTGCTGCTTCCAAGTTGTGTGACCTTGGCTAAGTCACTTAACCTTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GAGTTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCTCTGAGGCCAAGTTTTaGACACATAATTTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: EFGKQFAKAAVGMAKQSISEAKF*THNLPS
Trigger: ACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGA...GATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GTTCAGGAGCAGATCACTTGGAAGCCTCTGAGCTCTTCAAAGAATTCCACAAGTAAAGAATTCCACAAGTaGCTGATCACACTTCATTCC +
Preference number: 4 (lower is better)
Translates to: VQEQITWKPLSSSKNSTSKEFHK*LITLHS
Trigger: GGAATGAAGTGTGATCAGCCACTTGTGGAATTCTTT...ACTTGTGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GTGTGTAGTATGCGATCTTCACAGCAACCCTGTAAAGTAGGTGAGACAGAGATCAGATGCGTTTGGTCTTaGGTCTATGAAACAATAGGT +
Preference number: 4 (lower is better)
Translates to: VCSMRSSQQPCKVGETEIRCVWS*VYETIG
Trigger: ACCTATTGTTTCATAGACCCAAGACCAAACGCATCT...GATCTCTGTCTCACCTACTTTACAGGGTTGCTGTGAAGATCGCATACTACACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GGTCAGACTCATCTCTTGAATGGCAAGCCACGTGTTTATTACATTTCTTGTTCATTACACAGCTTGAAGTaGCAGATCAGGTCCAGAACC +
Preference number: 4 (lower is better)
Translates to: GQTHLLNGKPRVYYISCSLHSLK*QIRSRT
Trigger: GGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAA...TGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp CTCAAGTCAAACAGGATCAATCTTTCTCAAATATTCCTATCAACAGTTATCTGCCTCCTGAAGCCTTCCTaGCTGCTCAGTCTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: LKSNRINLSQIFLSTVICLLKPS*LLSLEG
Trigger: TCCTTCAAGACTGAGCAGTCAGGAAGGCTTCAGGAG...GCAGATAACTGTTGATAGGAATATTTGAGAAAGATTGATCCTGTTTGACTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp TGCAGCCTGTGTACTGGTAGACAACACGTACACATACCACTGCTTTTCACAAAATTTGGACACATAATTTaGCCAGTCTGGTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: CSLCTGRQHVHIPLLFTKFGHII*PVWSSS
Trigger: TGAAGATGACCAGACTGGGCAAATTATGTGTCCAAA...TTTTGTGAAAAGCAGTGGTATGTGTACGTGTTGTCTACCAGTACACAGGCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp TTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCCACTTTGGACACATAATTTaGCCAGTCTGGTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: FGKQFAKAAVGMAKQSIHFGHII*PVWSSS
Trigger: TGAAGATGACCAGACTGGGCAAATTATGTGTCCAAA...GTGGATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp GTGTGTAGTATGCGATCTTCACAGCAACCCTGTAAAGTAGGTGAGACAGAGATCGCAAAGAAAGCAACTTaGCAAAAATTACACAGCTTG +
Preference number: 4 (lower is better)
Translates to: VCSMRSSQQPCKVGETEIAKKAT*QKLHSL
Trigger: CAAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGC...GATCTCTGTCTCACCTACTTTACAGGGTTGCTGTGAAGATCGCATACTACACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
3UTR CAA 72 bp TCTGGCACACAGAAAGTGAATGGTCAGACTCATCTCTaGAATGGCAAGCCACGTGTTTATTACATTTCTTGT +
Preference number: 4 (lower is better)
Translates to: SGTQKVNGQTHL*NGKPRVYYISC
Trigger: ACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACCATTCACTTTCTGTGTGCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp CTCAAGTCAAACAGGATCAATCTTTCTCAAATATTCCTATCAACAGTTATCTGCGTCTCCTGGGTTCTCTaGACAATGAAAGCAATGGGG +
Preference number: 4 (lower is better)
Translates to: LKSNRINLSQIFLSTVICVSWVL*TMKAMG
Trigger: CCCCATTGCTTTCATTGTTCAGAGAACCCAGGAGAC...GCAGATAACTGTTGATAGGAATATTTGAGAAAGATTGATCCTGTTTGACTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp GAGTTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCGCAAAGAAAGCAACTTaGCAAAAATTACACAGCTTG +
Preference number: 4 (lower is better)
Translates to: EFGKQFAKAAVGMAKQSIAKKAT*QKLHSL
Trigger: CAAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGC...GATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp GAGTTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCGTTGCCAGATGTTTCTaGATGTGGATAAAGATAGAT +
Preference number: 4 (lower is better)
Translates to: EFGKQFAKAAVGMAKQSIVARCF*MWIKID
Trigger: ATCTATCTTTATCCACATGCAGAAACATCTGGCAAC...GATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp GGTCAGACTCATCTCTTGAATGGCAAGCCACGTGTTTATTACATTTCTTGTTCAAAACTGAGGCACAGATaGCGAGAAATGTACATTGTG +
Preference number: 4 (lower is better)
Translates to: GQTHLLNGKPRVYYISCSKLRHR*REMYIV
Trigger: CACAATGTACATTTCTCGGCATCTGTGCCTCAGTTT...TGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp GGTCAGACTCATCTCTTGAATGGCAAGCCACGTGTTTATTACATTTCTTGTTCAAACCTGCCAGGTACATaGTCTTATTCCCATCCTATA +
Preference number: 4 (lower is better)
Translates to: GQTHLLNGKPRVYYISCSNLPGT*SYSHPI
Trigger: TATAGGATGGGAATAAGAGCATGTACCTGGCAGGTT...TGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GGTCAGACTCATCTCTTGAATGGCAAGCCACGTGTTTATTACATTTCTTGTTCATCTGAGGCCAAGTTTTaGACACATAATTTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: GQTHLLNGKPRVYYISCSSEAKF*THNLPS
Trigger: ACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGA...TGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp CTCAAGTCAAACAGGATCAATCTTTCTCAAATATTCCTATCAACAGTTATCTGCGGGTTTTGTGGGAGATaGAGCCAAAATCGCAGACAA +
Preference number: 4 (lower is better)
Translates to: LKSNRINLSQIFLSTVICGFCGR*SQNRRQ
Trigger: TTGTCTGCGATTTTGGCTTCATCTCCCACAAAACCC...GCAGATAACTGTTGATAGGAATATTTGAGAAAGATTGATCCTGTTTGACTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp CTCAAGTCAAACAGGATCAATCTTTCTCAAATATTCCTATCAACAGTTATCTGCAAGCTGCTGTGGGGATaGCAAAGCAATCAATCCACA +
Preference number: 4 (lower is better)
Translates to: LKSNRINLSQIFLSTVICKLLWG*QSNQST
Trigger: TGTGGATTGATTGCTTTGCCATCCCCACAGCAGCTT...GCAGATAACTGTTGATAGGAATATTTGAGAAAGATTGATCCTGTTTGACTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp GGTCAGACTCATCTCTTGAATGGCAAGCCACGTGTTTATTACATTTCTTGTTCAGACTCATCTCTTGAATaGCAAGCCACGTGTTTATTA +
Preference number: 4 (lower is better)
Translates to: GQTHLLNGKPRVYYISCSDSSLE*QATCLL
Trigger: TAATAAACACGTGGCTTGCCATTCAAGAGATGAGTC...TGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp CTCAAGTCAAACAGGATCAATCTTTCTCAAATATTCCTATCAACAGTTATCTGCAATTCCACAAGTGGCTaGTCACACTTCATTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LKSNRINLSQIFLSTVICNSTSG*SHFIPG
Trigger: TCCTGGAATGAAGTGTGATCAGCCACTTGTGGAATT...GCAGATAACTGTTGATAGGAATATTTGAGAAAGATTGATCCTGTTTGACTTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp CTCAAGTCAAACAGGATCAATCTTTCTCAAATATTCCTATCAACAGTTATCTGCTTCCTGTGTGTAGTATaGGATCTTCACAGCAACCCT +
Preference number: 4 (lower is better)
Translates to: LKSNRINLSQIFLSTVICFLCVV*DLHSNP
Trigger: AGGGTTGCTGTGAAGATCGCATACTACACACAGGAA...GCAGATAACTGTTGATAGGAATATTTGAGAAAGATTGATCCTGTTTGACTTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp CTCAAGTCAAACAGGATCAATCTTTCTCAAATATTCCTATCAACAGTTATCTGCTTGGTCTTGGGTCTATaGAACAATAGGTCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: LKSNRINLSQIFLSTVICLVLGL*NNRSSN
Trigger: GTTTGAAGACCTATTGTTTCATAGACCCAAGACCAA...GCAGATAACTGTTGATAGGAATATTTGAGAAAGATTGATCCTGTTTGACTTGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR TCA 90 bp CTCAAGTCAAACAGGATCAATCTTTCTCAAATATTCCTATCAACAGTTATCTGCAGCAGACCTTACAATTaGAAAACTGCTGCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: LKSNRINLSQIFLSTVICSRPYN*KTAALS
Trigger: TGACAAAGCAGCAGTTTTTCAATTGTAAGGTCTGCT...GCAGATAACTGTTGATAGGAATATTTGAGAAAGATTGATCCTGTTTGACTTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR GCA 90 bp CTCAAGTCAAACAGGATCAATCTTTCTCAAATATTCCTATCAACAGTTATCTGCGTTGCCAGATGTTTCTaGATGTGGATAAAGATAGAT +
Preference number: 4 (lower is better)
Translates to: LKSNRINLSQIFLSTVICVARCF*MWIKID
Trigger: ATCTATCTTTATCCACATGCAGAAACATCTGGCAAC...GCAGATAACTGTTGATAGGAATATTTGAGAAAGATTGATCCTGTTTGACTTGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CCA 90 bp CTCAAGTCAAACAGGATCAATCTTTCTCAAATATTCCTATCAACAGTTATCTGCAGATGTTTCTGCATGTaGATAAAGATAGATAGGCCA +
Preference number: 4 (lower is better)
Translates to: LKSNRINLSQIFLSTVICRCFCM*IKIDRP
Trigger: TGGCCTATCTATCTTTATCCACATGCAGAAACATCT...GCAGATAACTGTTGATAGGAATATTTGAGAAAGATTGATCCTGTTTGACTTGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS CCA 90 bp CCGCTCGGTCGCCCAACCCCGAGGAGCCGCCCGCCGGACTCGCTTTaGGGCCAAGAGGGAACGCGCCTCCCGGGCCCGCGGCGGAGCGGA +
Preference number: 5 (lower is better)
Translates to: PLGRPTPRSRPPDSL*GQEGTRLPGPRRSG
Trigger: TCCGCTCCGCCGCGGGCCCGGGAGGCGCGTTCCCTCTTGGCCCCAAAGCGAGTCCGGCGGGCGGCTCCTCGGGGTTGGGCGACCGAGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS CCA 90 bp GCAATGGGCCAGTGGCCCCCGGGTCCACCTGTGGTTCACAGGCCATaGCAGGGCGCCAGCTGTTTCTACTTCCCCTTCTCAGAGCTGTGG +
Preference number: 5 (lower is better)
Translates to: AMGQWPPGPPVVHRP*QGASCFYFPFSELW
Trigger: CCACAGCTCTGAGAAGGGGAAGTAGAAACAGCTGGCGCCCTGCCATGGCCTGTGAACCACAGGTGGACCCGGGGGCCACTGGCCCATTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288502.9
ENST00000374049.4
ENST00000471206.1
CDS CCA 90 bp GCGCCAGCTGTTTCTACTTCCCCTTCTCAGAGCTGTGGTTCATTCTaGAGCAGCCAGCTCAGCATCATATGCCGCCCGCGCCGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: APAVSTSPSQSCGSF*SSQLSIICRPRRRR
Trigger: GCGGCGGCGGCGCGGGCGGCATATGATGCTGAGCTGGCTGCTCCAGAATGAACCACAGCTCTGAGAAGGGGAAGTAGAAACAGCTGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288502.9
ENST00000374049.4
ENST00000471206.1
CDS TCA 90 bp GGTCGAAGGAGATGGGTGCACAGGTATTGTCAATCCGGAGAACAGTaGGGACCTGGCCATTGTGGAGCTCTTGCCCCCAGCCAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: GRRRWVHRYCQSGEQ*GPGHCGALAPSQEG
Trigger: GCCCTCCTGGCTGGGGGCAAGAGCTCCACAATGGCCAGGTCCTCACTGTTCTCCGGATTGACAATACCTGTGCACCCATCTCCTTCGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS GCA 90 bp GGGCAGGAGAGGAGCATCCTCCAAGTTCTCAGGCCCCTCCGCTGTTaGAGGGCTCACCCCAGTCTCCATGACAACACACAACTGGCTCAA +
Preference number: 5 (lower is better)
Translates to: GQERSILQVLRPLRC*RAHPSLHDNTQLAQ
Trigger: TTGAGCCAGTTGTGTGTTGTCATGGAGACTGGGGTGAGCCCTGCAACAGCGGAGGGGCCTGAGAACTTGGAGGATGCTCCTCTCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS CCA 90 bp CCATGGCAGGGCGCCAGCTGTTTCTACTTCCCCTTCTCAGAGCTGTaGTTCATTCTGGAGCAGCCAGCTCAGCATCATATGCCGCCCGCG +
Preference number: 5 (lower is better)
Translates to: PWQGASCFYFPFSEL*FILEQPAQHHMPPA
Trigger: CGCGGGCGGCATATGATGCTGAGCTGGCTGCTCCAGAATGAACCACAGCTCTGAGAAGGGGAAGTAGAAACAGCTGGCGCCCTGCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288502.9
ENST00000374049.4
ENST00000471206.1
CDS TCA 90 bp TCGCCAGGAACGGGCAGCACCCTGTGCCTAGGATGTAGGCTTCTATaGGCTGGCAGGGGCATGGAATTCTCGGAGAGTTCGTGTGTCGTG +
Preference number: 5 (lower is better)
Translates to: SPGTGSTLCLGCRLL*AGRGMEFSESSCVV
Trigger: CACGACACACGAACTCTCCGAGAATTCCATGCCCCTGCCAGCTCATAGAAGCCTACATCCTAGGCACAGGGTGCTGCCCGTTCCTGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS GCA 90 bp CTGGTCAGCCGGGACCTGGATGCCCCAAGTTTGCAGTTGCTCTTCTaGGGCTCCCAGGTCGAAGGAGATGGGTGCACAGGTATTGTCAAT +
Preference number: 5 (lower is better)
Translates to: LVSRDLDAPSLQLLF*GSQVEGDGCTGIVN
Trigger: ATTGACAATACCTGTGCACCCATCTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGGGGCATCCAGGTCCCGGCTGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000471206.1
CDS GCA 90 bp GTCAGCCGGGACCTGCTGGATGCCCCAAGTTTGCAGTTGCTCTTCTaGGGCTCCCAGGTCGAAGGAGATGGGTGCACAGGTATTGTCAAT +
Preference number: 5 (lower is better)
Translates to: VSRDLLDAPSLQLLF*GSQVEGDGCTGIVN
Trigger: ATTGACAATACCTGTGCACCCATCTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGGGGCATCCAGCAGGTCCCGGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374049.4
CDS-3UTR CAA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTCCCGCCGGACTCGCTTaGGGGCCAAGAGGGAACGCG +
Preference number: 5 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGPAGLA*GPRGNA
Trigger: CGCGTTCCCTCTTGGCCCCAAAGCGAGTCCGGCGGG...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS CCA 90 bp CGGCTCAGCCTCAGGAACAAGCTGATGAAGCTCAGTCTGCATGAGTaGCCTCTCGTTAGGACAAGAATTGCCGGGCAGGAGAGGAGCATC +
Preference number: 5 (lower is better)
Translates to: RLSLRNKLMKLSLHE*PLVRTRIAGQERSI
Trigger: GATGCTCCTCTCCTGCCCGGCAATTCTTGTCCTAACGAGAGGCCACTCATGCAGACTGAGCTTCATCAGCTTGTTCCTGAGGCTGAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS TCA 90 bp AGTTCTCAGGCCCCTCCGCTGTTGCAGGGCTCACCCCAGTCTCCATaGCAACACACAACTGGCTCAATCTGCTTCTCAGCAAGGACTCTT +
Preference number: 5 (lower is better)
Translates to: SSQAPPLLQGSPQSP*QHTTGSICFSARTL
Trigger: AAGAGTCCTTGCTGAGAAGCAGATTGAGCCAGTTGTGTGTTGTCATGGAGACTGGGGTGAGCCCTGCAACAGCGGAGGGGCCTGAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp TCAGAAAGGTTAAGTGACTTAGCCAAGGTCACACAACTTGGAAGCAGCAGATCACCCGCCGGACTCGCTTaGGGGCCAAGAGGGAACGCG +
Preference number: 5 (lower is better)
Translates to: SERLSDLAKVTQLGSSRSPAGLA*GPRGNA
Trigger: CGCGTTCCCTCTTGGCCCCAAAGCGAGTCCGGCGGG...TGATCTGCTGCTTCCAAGTTGTGTGACCTTGGCTAAGTCACTTAACCTTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS TCA 90 bp GGTCGAAGGAGATGGGTGCACAGGTATTGTCAATCCGGAGAACAGTaGGGACCTGGCCATTGTGGAGCTCTGGAAGCAGACCAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: GRRRWVHRYCQSGEQ*GPGHCGALEADQKL
Trigger: AAGCTTCTGGTCTGCTTCCAGAGCTCCACAATGGCCAGGTCCTCACTGTTCTCCGGATTGACAATACCTGTGCACCCATCTCCTTCGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471206.1
CDS GCA 90 bp AGTTTGCAGTTGCTCTTCTGCGGCTCCCAGGTCGAAGGAGATGGGTaGACAGGTATTGTCAATCCGGAGAACAGTGAGGACCTGGCCATT +
Preference number: 5 (lower is better)
Translates to: SLQLLFCGSQVEGDG*TGIVNPENSEDLAI
Trigger: AATGGCCAGGTCCTCACTGTTCTCCGGATTGACAATACCTGTGCACCCATCTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288502.9
ENST00000374049.4
ENST00000471206.1
CDS CCA 90 bp ACACCTCTGGCCATGAGAACCTCCTCGCAACAAGGAGGGACACGGTaGCCATCCTCAAATCCTCTTGAGAGAAGGACTGGATTTGACTGG +
Preference number: 5 (lower is better)
Translates to: TPLAMRTSSQQGGTR*PSSNPLERRTGFDW
Trigger: CCAGTCAAATCCAGTCCTTCTCTCAAGAGGATTTGAGGATGGCCACCGTGTCCCTCCTTGTTGCGAGGAGGTTCTCATGGCCAGAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471206.1
CDS-3UTR CAA 90 bp AGAATTCCACAAGTGGCTGATCACACTTCATTCCAGGACAATGTTCATGTCGGGGCCATTGTGGAGCTCTaGCCCCCAGCCAGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: RIPQVADHTSFQDNVHVGAIVEL*PPARRA
Trigger: AGCCCTCCTGGCTGGGGGCAAGAGCTCCACAATGGC...CCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGGAATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp CTTCACTCTCACTCGAAGACATTGCACTGCCTACACCATGGCCACATCTATCACGCCCCAAGTTTGCAGTaGCTCTTCTGCGGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: LHSHSKTLHCLHHGHIYHAPSLQ*LFCGSQ
Trigger: CTGGGAGCCGCAGAAGAGCAACTGCAAACTTGGGGC...GTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp ATTACACAGCTTGAAGTGGCAGATCAGGTCCAGAACCCAGGTCCACAGCAATGTGCCCCAAGTTTGCAGTaGCTCTTCTGCGGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: ITQLEVADQVQNPGPQQCAPSLQ*LFCGSQ
Trigger: CTGGGAGCCGCAGAAGAGCAACTGCAAACTTGGGGC...ACATTGCTGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp TTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCCACGCCATTGTGGAGCTCTaGCCCCCAGCCAGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: FGKQFAKAAVGMAKQSIHAIVEL*PPARRA
Trigger: AGCCCTCCTGGCTGGGGGCAAGAGCTCCACAATGGC...GTGGATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp ATTACACAGCTTGAAGTGGCAGATCAGGTCCAGAACCCAGGTCCACAGCAATGTCTGGATGCCCCAAGTTaGCAGTTGCTCTTCTGCGGC +
Preference number: 5 (lower is better)
Translates to: ITQLEVADQVQNPGPQQCLDAPS*QLLFCG
Trigger: GCCGCAGAAGAGCAACTGCAAACTTGGGGCATCCAG...ACATTGCTGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp CTTCACTCTCACTCGAAGACATTGCACTGCCTACACCATGGCCACATCTATCACAGCCTCAGGTCCGTGTaGGTGTTGGCCTTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: LHSHSKTLHCLHHGHIYHSLRSV*VLAFFW
Trigger: CCAGAAGAAGGCCAACACCAACACGGACCTGAGGCT...GTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTCAGAGAGCAGCAGGGTaGGCTGTGTGGGAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGQRAAG*AVWEGF
Trigger: GAAGCCTTCCCACACAGCCAACCCTGCTGCTCTCTG...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp ACAAGGATTTTTGTGCTGGGCCCTGAAGTGAGCACAACACCCCAGTGGCTGACATCTCACTCGAAGACATaGCACTGCCTACACCATGGC +
Preference number: 5 (lower is better)
Translates to: TRIFVLGPEVSTTPQWLTSHSKT*HCLHHG
Trigger: GCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGA...TGTCAGCCACTGGGGTGTTGTGCTCACTTCAGGGCCCAGCACAAAAATCCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS TCA 90 bp CCATTGTTCTACATCTGGGGCTCCCCATTGGCCATCTTGGGCTCCTaGAGCCTTCCTGACTGCTCAGTCTTGAAGGAAGATGAGTACCTT +
Preference number: 5 (lower is better)
Translates to: PLFYIWGSPLAILGS*SLPDCSVLKEDEYL
Trigger: AAGGTACTCATCTTCCTTCAAGACTGAGCAGTCAGGAAGGCTTCAGGAGCCCAAGATGGCCAATGGGGAGCCCCAGATGTAGAACAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482552.1
CDS CCA 90 bp TCCGCTGTTGCAGGGCTCACCCCAGTCTCCATGACAACACACAACTaGCTCAATCTGCTTCTCAGCAAGGACTCTTGGCTAGTCTTCATT +
Preference number: 5 (lower is better)
Translates to: SAVAGLTPVSMTTHN*LNLLLSKDSWLVFI
Trigger: AATGAAGACTAGCCAAGAGTCCTTGCTGAGAAGCAGATTGAGCCAGTTGTGTGTTGTCATGGAGACTGGGGTGAGCCCTGCAACAGCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp TTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCCACGTGAGGACCTGGCCATaGTGGAGCTCTTGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: FGKQFAKAAVGMAKQSIHVRTWP*WSSCPQ
Trigger: CTGGGGGCAAGAGCTCCACAATGGCCAGGTCCTCAC...GTGGATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp ACAAGGATTTTTGTGCTGGGCCCTGAAGTGAGCACAACACCCCAGTGGCTGACAATGGGTGCACAGGTATaGTCAATCCGGAGAACAGTG +
Preference number: 5 (lower is better)
Translates to: TRIFVLGPEVSTTPQWLTMGAQV*SIRRTV
Trigger: CACTGTTCTCCGGATTGACAATACCTGTGCACCCAT...TGTCAGCCACTGGGGTGTTGTGCTCACTTCAGGGCCCAGCACAAAAATCCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp TTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCCACTGTGTCGTGTCCCCATaGCCTGAGGGAGCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: FGKQFAKAAVGMAKQSIHCVVSP*PEGAGR
Trigger: CCTCCCAGCTCCCTCAGGCAATGGGGACACGACACA...GTGGATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp CCAGGCAAAGAAAGCAACTTGCCAAAAATTACACAGCTTGAAGTGGCAGATCAGTGTGTCGTGTCCCCATaGCCTGAGGGAGCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: PGKESNLPKITQLEVADQCVVSP*PEGAGR
Trigger: CCTCCCAGCTCCCTCAGGCAATGGGGACACGACACA...CTGATCTGCCACTTCAAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp TCAGAAAGGTTAAGTGACTTAGCCAAGGTCACACAACTTGGAAGCAGCAGATCATGTAATCCCAGCACTTaGGGAGCCCGAGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: SERLSDLAKVTQLGSSRSCNPST*GARGGW
Trigger: CCACCCGCCTCGGGCTCCCAAAGTGCTGGGATTACA...TGATCTGCTGCTTCCAAGTTGTGTGACCTTGGCTAAGTCACTTAACCTTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp ACAAGGATTTTTGTGCTGGGCCCTGAAGTGAGCACAACACCCCAGTGGCTGACAGCCGAGAAATGTACATaGTGGGCATACCCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: TRIFVLGPEVSTTPQWLTAEKCT*WAYPES
Trigger: GCTTTCAGGGTATGCCCACAATGTACATTTCTCGGC...TGTCAGCCACTGGGGTGTTGTGCTCACTTCAGGGCCCAGCACAAAAATCCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp TGCAGCCTGTGTACTGGTAGACAACACGTACACATACCACTGCTTTTCACAAAACAGAGAGCAGCAGGGTaGGCTGTGTGGGAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: CSLCTGRQHVHIPLLFTKQRAAG*AVWEGF
Trigger: GAAGCCTTCCCACACAGCCAACCCTGCTGCTCTCTG...TTTTGTGAAAAGCAGTGGTATGTGTACGTGTTGTCTACCAGTACACAGGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp CTGACTGAGAAATACGGGCTTCTTTCTATTGGTCACATTCACAGCCAACATTTCTGTAATCCCAGCACTTaGGGAGCCCGAGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: LTEKYGLLSIGHIHSQHFCNPST*GARGGW
Trigger: CCACCCGCCTCGGGCTCCCAAAGTGCTGGGATTACA...GAAATGTTGGCTGTGAATGTGACCAATAGAAAGAAGCCCGTATTTCTCAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp ATTACACAGCTTGAAGTGGCAGATCAGGTCCAGAACCCAGGTCCACAGCAATGTATGGGTGCACAGGTATaGTCAATCCGGAGAACAGTG +
Preference number: 5 (lower is better)
Translates to: ITQLEVADQVQNPGPQQCMGAQV*SIRRTV
Trigger: CACTGTTCTCCGGATTGACAATACCTGTGCACCCAT...ACATTGCTGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp TTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCCACCTGGATGCCCCAAGTTaGCAGTTGCTCTTCTGCGGC +
Preference number: 5 (lower is better)
Translates to: FGKQFAKAAVGMAKQSIHLDAPS*QLLFCG
Trigger: GCCGCAGAAGAGCAACTGCAAACTTGGGGCATCCAG...GTGGATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTAGGTCCGTGTTGGTGTaGGCCTTCTTCTGGTGTCTT +
Preference number: 5 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGRSVLV*AFFWCL
Trigger: AAGACACCAGAAGAAGGCCAACACCAACACGGACCT...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp TGCAGCCTGTGTACTGGTAGACAACACGTACACATACCACTGCTTTTCACAAAAAGCCTCAGGTCCGTGTaGGTGTTGGCCTTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: CSLCTGRQHVHIPLLFTKSLRSV*VLAFFW
Trigger: CCAGAAGAAGGCCAACACCAACACGGACCTGAGGCT...TTTTGTGAAAAGCAGTGGTATGTGTACGTGTTGTCTACCAGTACACAGGCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp ATTACACAGCTTGAAGTGGCAGATCAGGTCCAGAACCCAGGTCCACAGCAATGTGGTCAGACTCATCTCTaGAATGGCAAGCCACGTGTT +
Preference number: 5 (lower is better)
Translates to: ITQLEVADQVQNPGPQQCGQTHL*NGKPRV
Trigger: AACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC...ACATTGCTGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTGATATATCTTCTCACTaGGGGCTCCAAGAGGGCACT +
Preference number: 5 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGDISSH*GLQEGT
Trigger: AGTGCCCTCTTGGAGCCCCAAGTGAGAAGATATATC...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp TGCAGCCTGTGTACTGGTAGACAACACGTACACATACCACTGCTTTTCACAAAATCGTTAGGACAAGAATaGCCGGGCAGGAGAGGAGCA +
Preference number: 5 (lower is better)
Translates to: CSLCTGRQHVHIPLLFTKSLGQE*PGRRGA
Trigger: TGCTCCTCTCCTGCCCGGCAATTCTTGTCCTAACGA...TTTTGTGAAAAGCAGTGGTATGTGTACGTGTTGTCTACCAGTACACAGGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp ATTACACAGCTTGAAGTGGCAGATCAGGTCCAGAACCCAGGTCCACAGCAATGTCCTGACTGCTCAGTCTaGAAGGAAGATGAGTACCTT +
Preference number: 5 (lower is better)
Translates to: ITQLEVADQVQNPGPQQCPDCSV*KEDEYL
Trigger: AAGGTACTCATCTTCCTTCAAGACTGAGCAGTCAGG...ACATTGCTGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp GTGTGTAGTATGCGATCTTCACAGCAACCCTGTAAAGTAGGTGAGACAGAGATCTCTCACTCGAAGACATaGCACTGCCTACACCATGGC +
Preference number: 5 (lower is better)
Translates to: VCSMRSSQQPCKVGETEISHSKT*HCLHHG
Trigger: GCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGA...GATCTCTGTCTCACCTACTTTACAGGGTTGCTGTGAAGATCGCATACTACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp CCAGGCAAAGAAAGCAACTTGCCAAAAATTACACAGCTTGAAGTGGCAGATCAGAGGTCCGTGTTGGTGTaGGCCTTCTTCTGGTGTCTT +
Preference number: 5 (lower is better)
Translates to: PGKESNLPKITQLEVADQRSVLV*AFFWCL
Trigger: AAGACACCAGAAGAAGGCCAACACCAACACGGACCT...CTGATCTGCCACTTCAAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp ACAAGGATTTTTGTGCTGGGCCCTGAAGTGAGCACAACACCCCAGTGGCTGACAAATAGGTCTTCAAACTaGTTCAGGAGCAGATCACTT +
Preference number: 5 (lower is better)
Translates to: TRIFVLGPEVSTTPQWLTNRSSN*FRSRSL
Trigger: AAGTGATCTGCTCCTGAACAAGTTTGAAGACCTATT...TGTCAGCCACTGGGGTGTTGTGCTCACTTCAGGGCCCAGCACAAAAATCCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp CATCATCTGAGGCCAAGTTTTGGACACATAATTTGCCCAGTCTGGTCATCTTCAAAGCTGCTCTCAGCCTaGACCAAAGCAGCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: HHLRPSFGHIICPVWSSSKLLSA*TKAAFP
Trigger: TGGAAAGGCTGCTTTGGTCAAGGCTGAGAGCAGCTT...TGAAGATGACCAGACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGATGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp GAGTTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCAAGCTGCTCTCAGCCTaGACCAAAGCAGCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: EFGKQFAKAAVGMAKQSIKLLSA*TKAAFP
Trigger: TGGAAAGGCTGCTTTGGTCAAGGCTGAGAGCAGCTT...GATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp GAGTTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCGATATATCTTCTCACTaGGGGCTCCAAGAGGGCACT +
Preference number: 5 (lower is better)
Translates to: EFGKQFAKAAVGMAKQSIDISSH*GLQEGT
Trigger: AGTGCCCTCTTGGAGCCCCAAGTGAGAAGATATATC...GATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp GTTCAGGAGCAGATCACTTGGAAGCCTCTGAGCTCTTCAAAGAATTCCACAAGTCCTGACTGCTCAGTCTaGAAGGAAGATGAGTACCTT +
Preference number: 5 (lower is better)
Translates to: VQEQITWKPLSSSKNSTSPDCSV*KEDEYL
Trigger: AAGGTACTCATCTTCCTTCAAGACTGAGCAGTCAGG...ACTTGTGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp GTGTGTAGTATGCGATCTTCACAGCAACCCTGTAAAGTAGGTGAGACAGAGATCTCTGGCATGAAGGGGTaGGAGATGGAAACATCATCT +
Preference number: 5 (lower is better)
Translates to: VCSMRSSQQPCKVGETEISGMKG*EMETSS
Trigger: AGATGATGTTTCCATCTCCAACCCCTTCATGCCAGA...GATCTCTGTCTCACCTACTTTACAGGGTTGCTGTGAAGATCGCATACTACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp TTTCCTCTGTGCCAGGTCAGAAAGACAGTGGTCACCTTCGTGAATAATTTCCTTCCAAGGTCACACAACTaGGAAGCAGCAGATCAGGAA +
Preference number: 5 (lower is better)
Translates to: FPLCQVRKTVVTFVNNFLPRSHN*EAADQE
Trigger: TTCCTGATCTGCTGCTTCCAAGTTGTGTGACCTTGG...AAGGAAATTATTCACGAAGGTGACCACTGTCTTTCTGACCTGGCACAGAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp TTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCCACGCCGAGAAATGTACATaGTGGGCATACCCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: FGKQFAKAAVGMAKQSIHAEKCT*WAYPES
Trigger: GCTTTCAGGGTATGCCCACAATGTACATTTCTCGGC...GTGGATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp GGTCACACAACTTGGAAGCAGCAGATCAGGAAGAAAAATCCAGGTCTGCTAGGTAACAGTTATCTGCCCTaGATCTCTTTCTTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: GHTTWKQQIRKKNPGLLGNSYLP*ISFFCL
Trigger: GAGACAGAAGAAAGAGATCAAGGGCAGATAACTGTT...ACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp CTTCACTCTCACTCGAAGACATTGCACTGCCTACACCATGGCCACATCTATCACAAGCAGACCTTACAATaGAAAAACTGCTGCTTTGTC +
Preference number: 5 (lower is better)
Translates to: LHSHSKTLHCLHHGHIYHKQTLQ*KNCCFV
Trigger: GACAAAGCAGCAGTTTTTCAATTGTAAGGTCTGCTT...GTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp CATCATCTGAGGCCAAGTTTTGGACACATAATTTGCCCAGTCTGGTCATCTTCATCTCAGCAAGGACTCTaGGCTAGTCTTCATTTCTTG +
Preference number: 5 (lower is better)
Translates to: HHLRPSFGHIICPVWSSSSQQGL*ASLHFL
Trigger: CAAGAAATGAAGACTAGCCAAGAGTCCTTGCTGAGA...TGAAGATGACCAGACTGGGCAAATTATGTGTCCAAAACTTGGCCTCAGATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp CTCAAGTCAAACAGGATCAATCTTTCTCAAATATTCCTATCAACAGTTATCTGCCATCACAGGCCCCTTTaGGAGTGCCCCCAGATGCTT +
Preference number: 5 (lower is better)
Translates to: LKSNRINLSQIFLSTVICHHRPL*ECPQML
Trigger: AAGCATCTGGGGGCACTCCAAAAGGGGCCTGTGATG...GCAGATAACTGTTGATAGGAATATTTGAGAAAGATTGATCCTGTTTGACTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp CTGACTGAGAAATACGGGCTTCTTTCTATTGGTCACATTCACAGCCAACATTTCTCTGGCATGAAGGGGTaGGAGATGGAAACATCATCT +
Preference number: 5 (lower is better)
Translates to: LTEKYGLLSIGHIHSQHFSGMKG*EMETSS
Trigger: AGATGATGTTTCCATCTCCAACCCCTTCATGCCAGA...GAAATGTTGGCTGTGAATGTGACCAATAGAAAGAAGCCCGTATTTCTCAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp GGTCAGACTCATCTCTTGAATGGCAAGCCACGTGTTTATTACATTTCTTGTTCACCAAGGTCACACAACTaGGAAGCAGCAGATCAGGAA +
Preference number: 5 (lower is better)
Translates to: GQTHLLNGKPRVYYISCSPRSHN*EAADQE
Trigger: TTCCTGATCTGCTGCTTCCAAGTTGTGTGACCTTGG...TGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp GGTCAGACTCATCTCTTGAATGGCAAGCCACGTGTTTATTACATTTCTTGTTCAGGTCAGACTCATCTCTaGAATGGCAAGCCACGTGTT +
Preference number: 5 (lower is better)
Translates to: GQTHLLNGKPRVYYISCSGQTHL*NGKPRV
Trigger: AACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC...TGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp CTCAAGTCAAACAGGATCAATCTTTCTCAAATATTCCTATCAACAGTTATCTGCTCGTTAGGACAAGAATaGCCGGGCAGGAGAGGAGCA +
Preference number: 5 (lower is better)
Translates to: LKSNRINLSQIFLSTVICSLGQE*PGRRGA
Trigger: TGCTCCTCTCCTGCCCGGCAATTCTTGTCCTAACGA...GCAGATAACTGTTGATAGGAATATTTGAGAAAGATTGATCCTGTTTGACTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp GTTCAGGAGCAGATCACTTGGAAGCCTCTGAGCTCTTCAAAGAATTCCACAAGTAAGCAGACCTTACAATaGAAAAACTGCTGCTTTGTC +
Preference number: 5 (lower is better)
Translates to: VQEQITWKPLSSSKNSTSKQTLQ*KNCCFV
Trigger: GACAAAGCAGCAGTTTTTCAATTGTAAGGTCTGCTT...ACTTGTGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp TTTGGAAAGCAATTTGCAAAAGCTGCTGTGGGGATGGCAAAGCAATCAATCCACGGCAAAGAAAGCAACTaGCCAAAAATTACACAGCTT +
Preference number: 5 (lower is better)
Translates to: FGKQFAKAAVGMAKQSIHGKESN*PKITQL
Trigger: AAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGCC...GTGGATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp CTCAAGTCAAACAGGATCAATCTTTCTCAAATATTCCTATCAACAGTTATCTGCCTCAGCCATGTGGGGTaGCCAGATGTTTCTGCATGT +
Preference number: 5 (lower is better)
Translates to: LKSNRINLSQIFLSTVICLSHVG*PDVSAC
Trigger: ACATGCAGAAACATCTGGCAACCCCACATGGCTGAG...GCAGATAACTGTTGATAGGAATATTTGAGAAAGATTGATCCTGTTTGACTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp TGCAGCCTGTGTACTGGTAGACAACACGTACACATACCACTGCTTTTCACAAAAAGCTTTCACTCAAGTTaGGTATTCAAAGTTGCAAGC +
Preference number: 5 (lower is better)
Translates to: CSLCTGRQHVHIPLLFTKSFHSS*VFKVAS
Trigger: GCTTGCAACTTTGAATACCAAACTTGAGTGAAAGCT...TTTTGTGAAAAGCAGTGGTATGTGTACGTGTTGTCTACCAGTACACAGGCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp TTTCCTCTGTGCCAGGTCAGAAAGACAGTGGTCACCTTCGTGAATAATTTCCTTAGCTTTCACTCAAGTTaGGTATTCAAAGTTGCAAGC +
Preference number: 5 (lower is better)
Translates to: FPLCQVRKTVVTFVNNFLSFHSS*VFKVAS
Trigger: GCTTGCAACTTTGAATACCAAACTTGAGTGAAAGCT...AAGGAAATTATTCACGAAGGTGACCACTGTCTTTCTGACCTGGCACAGAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS-3UTR CAA 90 bp GGTCAGACTCATCTCTTGAATGGCAAGCCACGTGTTTATTACATTTCTTGTTCAAACAGTTATCTGCCCTaGATCTCTTTCTTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: GQTHLLNGKPRVYYISCSNSYLP*ISFFCL
Trigger: GAGACAGAAGAAAGAGATCAAGGGCAGATAACTGTT...TGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS CAA 90 bp CCCGCTCGGTCGCCCAACCCCGAGGAGCCGCCCGCCGGACTCGCTTaGGGGCCAAGAGGGAACGCGCCTCCCGGGCCCGCGGCGGAGCGG +
Preference number: 6 (lower is better)
Translates to: PARSPNPEEPPAGLA*GPRGNAPPGPAAER
Trigger: CCGCTCCGCCGCGGGCCCGGGAGGCGCGTTCCCTCTTGGCCCCAAAGCGAGTCCGGCGGGCGGCTCCTCGGGGTTGGGCGACCGAGCGGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS CCA 72 bp CGCCCAACCCCGAGGAGCCGCCCGCCGGACTCGCTTTaGGGCCAAGAGGGAACGCGCCTCCCGGGCCCGCGG +
Preference number: 6 (lower is better)
Translates to: RPTPRSRPPDSL*GQEGTRLPGPR
Trigger: CCGCGGGCCCGGGAGGCGCGTTCCCTCTTGGCCCCAAAGCGAGTCCGGCGGGCGGCTCCTCGGGGTTGGGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS CAA 72 bp TCGCCCAACCCCGAGGAGCCGCCCGCCGGACTCGCTTaGGGGCCAAGAGGGAACGCGCCTCCCGGGCCCGCG +
Preference number: 6 (lower is better)
Translates to: SPNPEEPPAGLA*GPRGNAPPGPA
Trigger: CGCGGGCCCGGGAGGCGCGTTCCCTCTTGGCCCCAAAGCGAGTCCGGCGGGCGGCTCCTCGGGGTTGGGCGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS GCA 72 bp AGGTCAGGCTCACCGCGGCCAGGGTCACGAGCAGCATaGCAGCCCAGTGGTTCCCCAAGGCAAACATCTGAC +
Preference number: 6 (lower is better)
Translates to: RSGSPRPGSRAA*QPSGSPRQTSD
Trigger: GTCAGATGTTTGCCTTGGGGAACCACTGGGCTGGCATGCTGCTCGTGACCCTGGCCGCGGTGAGCCTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288502.9
ENST00000374049.4
ENST00000471206.1
CDS CCA 72 bp CAGTGGCCCCCGGGTCCACCTGTGGTTCACAGGCCATaGCAGGGCGCCAGCTGTTTCTACTTCCCCTTCTCA +
Preference number: 6 (lower is better)
Translates to: QWPPGPPVVHRP*QGASCFYFPFS
Trigger: TGAGAAGGGGAAGTAGAAACAGCTGGCGCCCTGCCATGGCCTGTGAACCACAGGTGGACCCGGGGGCCACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288502.9
ENST00000374049.4
ENST00000471206.1
CDS CAA 72 bp CTGGTCAGCCGGGACCTGGATGCCCCAAGTTTGCAGTaGCTCTTCTGCGGCTCCCAGGTCGAAGGAGATGGG +
Preference number: 6 (lower is better)
Translates to: LVSRDLDAPSLQ*LFCGSQVEGDG
Trigger: CCCATCTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGGGGCATCCAGGTCCCGGCTGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000471206.1
CDS CAA 72 bp GTCAGCCGGGACCTGCTGGATGCCCCAAGTTTGCAGTaGCTCTTCTGCGGCTCCCAGGTCGAAGGAGATGGG +
Preference number: 6 (lower is better)
Translates to: VSRDLLDAPSLQ*LFCGSQVEGDG
Trigger: CCCATCTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGGGGCATCCAGCAGGTCCCGGCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374049.4
CDS TCA 72 bp ATCTGGCTGAGTGATAACCATACCAGGCTCGTGGGGTaGGCCCGAAGCCTGGCGGCATCACACCTCTGGCCA +
Preference number: 6 (lower is better)
Translates to: IWLSDNHTRLVG*ARSLAASHLWP
Trigger: TGGCCAGAGGTGTGATGCCGCCAGGCTTCGGGCTCACCCCACGAGCCTGGTATGGTTATCACTCAGCCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471206.1
CDS GCA 72 bp CGGGACCTGGATGCCCCAAGTTTGCAGTTGCTCTTCTaGGGCTCCCAGGTCGAAGGAGATGGGTGCACAGGT +
Preference number: 6 (lower is better)
Translates to: RDLDAPSLQLLF*GSQVEGDGCTG
Trigger: ACCTGTGCACCCATCTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGGGGCATCCAGGTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000471206.1
CDS GCA 72 bp TGGTCAGCCGGGACCTGGATGCCCCAAGTTTGCAGTTaGTCTTCTGCGGCTCCCAGGTCGAAGGAGATGGGT +
Preference number: 6 (lower is better)
Translates to: WSAGTWMPQVCS*SSAAPRSKEMG
Trigger: ACCCATCTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGGGGCATCCAGGTCCCGGCTGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000471206.1
CDS GCA 72 bp CTGTACTGGTCAGCCGGGACCTGGATGCCCCAAGTTTaGAGTTGCTCTTCTGCGGCTCCCAGGTCGAAGGAG +
Preference number: 6 (lower is better)
Translates to: LYWSAGTWMPQV*SCSSAAPRSKE
Trigger: CTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGGGGCATCCAGGTCCCGGCTGACCAGTACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000471206.1
CDS GCA 72 bp TCAGCCGGGACCTGCTGGATGCCCCAAGTTTGCAGTTaGTCTTCTGCGGCTCCCAGGTCGAAGGAGATGGGT +
Preference number: 6 (lower is better)
Translates to: SAGTCWMPQVCS*SSAAPRSKEMG
Trigger: ACCCATCTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGGGGCATCCAGCAGGTCCCGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374049.4
CDS GCA 72 bp TACTGGTCAGCCGGGACCTGCTGGATGCCCCAAGTTTaGAGTTGCTCTTCTGCGGCTCCCAGGTCGAAGGAG +
Preference number: 6 (lower is better)
Translates to: YWSAGTCWMPQV*SCSSAAPRSKE
Trigger: CTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGGGGCATCCAGCAGGTCCCGGCTGACCAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374049.4
CDS CAA 72 bp CCTGTACTGGTCAGCCGGGACCTGGATGCCCCAAGTTaGCAGTTGCTCTTCTGCGGCTCCCAGGTCGAAGGA +
Preference number: 6 (lower is better)
Translates to: PVLVSRDLDAPS*QLLFCGSQVEG
Trigger: TCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGGGGCATCCAGGTCCCGGCTGACCAGTACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000471206.1
CDS CAA 72 bp GTACTGGTCAGCCGGGACCTGCTGGATGCCCCAAGTTaGCAGTTGCTCTTCTGCGGCTCCCAGGTCGAAGGA +
Preference number: 6 (lower is better)
Translates to: VLVSRDLLDAPS*QLLFCGSQVEG
Trigger: TCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGGGGCATCCAGCAGGTCCCGGCTGACCAGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374049.4
CDS GCA 72 bp GACCTGCTGGATGCCCCAAGTTTGCAGTTGCTCTTCTaGGGCTCCCAGGTCGAAGGAGATGGGTGCACAGGT +
Preference number: 6 (lower is better)
Translates to: DLLDAPSLQLLF*GSQVEGDGCTG
Trigger: ACCTGTGCACCCATCTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGGGGCATCCAGCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374049.4
CDS CCA 72 bp GCACAGGTATTGTCAATCCGGAGAACAGTGAGGACCTaGCCATTGTGGAGCTCTTGCCCCCAGCCAGGAGGG +
Preference number: 6 (lower is better)
Translates to: AQVLSIRRTVRT*PLWSSCPQPGG
Trigger: CCCTCCTGGCTGGGGGCAAGAGCTCCACAATGGCCAGGTCCTCACTGTTCTCCGGATTGACAATACCTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS CAA 90 bp GGCAGGGGCATGGAATTCTCGGAGAGTTCGTGTGTCGTGTCCCCATaGCCTGAGGGAGCTGGGAGGTCACTAGAAGCCGGATGTAGTAGC +
Preference number: 6 (lower is better)
Translates to: GRGMEFSESSCVVSP*PEGAGRSLEAGCSS
Trigger: GCTACTACATCCGGCTTCTAGTGACCTCCCAGCTCCCTCAGGCAATGGGGACACGACACACGAACTCTCCGAGAATTCCATGCCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS TCA 72 bp GCCCCTCCGCTGTTGCAGGGCTCACCCCAGTCTCCATaGCAACACACAACTGGCTCAATCTGCTTCTCAGCA +
Preference number: 6 (lower is better)
Translates to: APPLLQGSPQSP*QHTTGSICFSA
Trigger: TGCTGAGAAGCAGATTGAGCCAGTTGTGTGTTGTCATGGAGACTGGGGTGAGCCCTGCAACAGCGGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS TCA 72 bp ACGGGCAGCACCCTGTGCCTAGGATGTAGGCTTCTATaGGCTGGCAGGGGCATGGAATTCTCGGAGAGTTCG +
Preference number: 6 (lower is better)
Translates to: TGSTLCLGCRLL*AGRGMEFSESS
Trigger: CGAACTCTCCGAGAATTCCATGCCCCTGCCAGCTCATAGAAGCCTACATCCTAGGCACAGGGTGCTGCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS GCA 72 bp AGGAGCATCCTCCAAGTTCTCAGGCCCCTCCGCTGTTaGAGGGCTCACCCCAGTCTCCATGACAACACACAA +
Preference number: 6 (lower is better)
Translates to: RSILQVLRPLRC*RAHPSLHDNTQ
Trigger: TTGTGTGTTGTCATGGAGACTGGGGTGAGCCCTGCAACAGCGGAGGGGCCTGAGAACTTGGAGGATGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS CAA 72 bp GCGGCTCCCAGGTCGAAGGAGATGGGTGCACAGGTATaGTCAATCCGGAGAACAGTGAGGACCTGGCCATTG +
Preference number: 6 (lower is better)
Translates to: AAPRSKEMGAQV*SIRRTVRTWPL
Trigger: CAATGGCCAGGTCCTCACTGTTCTCCGGATTGACAATACCTGTGCACCCATCTCCTTCGACCTGGGAGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288502.9
ENST00000374049.4
ENST00000471206.1
CDS CAA 90 bp TGCTCTTCTGCGGCTCCCAGGTCGAAGGAGATGGGTGCACAGGTATaGTCAATCCGGAGAACAGTGAGGACCTGGCCATTGTGGAGCTCT +
Preference number: 6 (lower is better)
Translates to: CSSAAPRSKEMGAQV*SIRRTVRTWPLWSS
Trigger: AGAGCTCCACAATGGCCAGGTCCTCACTGTTCTCCGGATTGACAATACCTGTGCACCCATCTCCTTCGACCTGGGAGCCGCAGAAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288502.9
ENST00000374049.4
ENST00000471206.1
CDS CAA 90 bp GGACACGGTGGCCATCCTCAAATCCTCTTGAGAGAAGGACTGGATTaGACTGGGAAGCCCCCAGGAGGCAGAATTAAGGCCAGAGGGAGG +
Preference number: 6 (lower is better)
Translates to: GHGGHPQILLREGLD*TGKPPGGRIKARGR
Trigger: CCTCCCTCTGGCCTTAATTCTGCCTCCTGGGGGCTTCCCAGTCAAATCCAGTCCTTCTCTCAAGAGGATTTGAGGATGGCCACCGTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471206.1
CDS TCA 72 bp AGATGGGTGCACAGGTATTGTCAATCCGGAGAACAGTaGGGACCTGGCCATTGTGGAGCTCTTGCCCCCAGC +
Preference number: 6 (lower is better)
Translates to: RWVHRYCQSGEQ*GPGHCGALAPS
Trigger: GCTGGGGGCAAGAGCTCCACAATGGCCAGGTCCTCACTGTTCTCCGGATTGACAATACCTGTGCACCCATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS CAA 90 bp GGCCAGCCGCATAGGCCTCGAGTTGTAGATGATATATCTTCTCACTaGGGGCTCCAAGAGGGCACTCTCAGCCAAGCTCCTGTACTGGTC +
Preference number: 6 (lower is better)
Translates to: GQPHRPRVVDDISSH*GLQEGTLSQAPVLV
Trigger: GACCAGTACAGGAGCTTGGCTGAGAGTGCCCTCTTGGAGCCCCAAGTGAGAAGATATATCATCTACAACTCGAGGCCTATGCGGCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288502.9
ENST00000374049.4
ENST00000471206.1
CDS GCA 72 bp TTGCTCTTCTGCGGCTCCCAGGTCGAAGGAGATGGGTaGACAGGTATTGTCAATCCGGAGAACAGTGAGGAC +
Preference number: 6 (lower is better)
Translates to: LLFCGSQVEGDG*TGIVNPENSED
Trigger: GTCCTCACTGTTCTCCGGATTGACAATACCTGTGCACCCATCTCCTTCGACCTGGGAGCCGCAGAAGAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288502.9
ENST00000374049.4
ENST00000471206.1
CDS CCA 72 bp GCCATGAGAACCTCCTCGCAACAAGGAGGGACACGGTaGCCATCCTCAAATCCTCTTGAGAGAAGGACTGGA +
Preference number: 6 (lower is better)
Translates to: AMRTSSQQGGTR*PSSNPLERRTG
Trigger: TCCAGTCCTTCTCTCAAGAGGATTTGAGGATGGCCACCGTGTCCCTCCTTGTTGCGAGGAGGTTCTCATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471206.1
CDS TCA 72 bp AGATGGGTGCACAGGTATTGTCAATCCGGAGAACAGTaGGGACCTGGCCATTGTGGAGCTCTGGAAGCAGAC +
Preference number: 6 (lower is better)
Translates to: RWVHRYCQSGEQ*GPGHCGALEAD
Trigger: GTCTGCTTCCAGAGCTCCACAATGGCCAGGTCCTCACTGTTCTCCGGATTGACAATACCTGTGCACCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471206.1
CDS CCA 72 bp GCAGGGCTCACCCCAGTCTCCATGACAACACACAACTaGCTCAATCTGCTTCTCAGCAAGGACTCTTGGCTA +
Preference number: 6 (lower is better)
Translates to: AGLTPVSMTTHN*LNLLLSKDSWL
Trigger: TAGCCAAGAGTCCTTGCTGAGAAGCAGATTGAGCCAGTTGTGTGTTGTCATGGAGACTGGGGTGAGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS CCA 72 bp CTCAGGAACAAGCTGATGAAGCTCAGTCTGCATGAGTaGCCTCTCGTTAGGACAAGAATTGCCGGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: LRNKLMKLSLHE*PLVRTRIAGQE
Trigger: CTCCTGCCCGGCAATTCTTGTCCTAACGAGAGGCCACTCATGCAGACTGAGCTTCATCAGCTTGTTCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS CCA 72 bp GCACAGGTATTGTCAATCCGGAGAACAGTGAGGACCTaGCCATTGTGGAGCTCTGGAAGCAGACCAGAAGCT +
Preference number: 6 (lower is better)
Translates to: AQVLSIRRTVRT*PLWSSGSRPEA
Trigger: AGCTTCTGGTCTGCTTCCAGAGCTCCACAATGGCCAGGTCCTCACTGTTCTCCGGATTGACAATACCTGTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471206.1
CDS CAA 72 bp TCAGTCTGCATGAGTGGCCTCTCGTTAGGACAAGAATaGCCGGGCAGGAGAGGAGCATCCTCCAAGTTCTCA +
Preference number: 6 (lower is better)
Translates to: SVCMSGLSLGQE*PGRRGASSKFS
Trigger: TGAGAACTTGGAGGATGCTCCTCTCCTGCCCGGCAATTCTTGTCCTAACGAGAGGCCACTCATGCAGACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288502.9
ENST00000374049.4
CDS CAA 72 bp AACAAGGAGGGACACGGTGGCCATCCTCAAATCCTCTaGAGAGAAGGACTGGATTTGACTGGGAAGCCCCCA +
Preference number: 6 (lower is better)
Translates to: NKEGHGGHPQIL*REGLDLTGKPP
Trigger: TGGGGGCTTCCCAGTCAAATCCAGTCCTTCTCTCAAGAGGATTTGAGGATGGCCACCGTGTCCCTCCTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471206.1
CDS CCA 72 bp AAACATAACCATTGTTCTACATCTGGGGCTCCCCATTaGCCATCTTGGGCTCCTGAAGCCTTCCTGACTGCT +
Preference number: 6 (lower is better)
Translates to: KHNHCSTSGAPH*PSWAPEAFLTA
Trigger: AGCAGTCAGGAAGGCTTCAGGAGCCCAAGATGGCCAATGGGGAGCCCCAGATGTAGAACAATGGTTATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482552.1
CDS CAA 72 bp CATAGGCCTCGAGTTGTAGATGATATATCTTCTCACTaGGGGCTCCAAGAGGGCACTCTCAGCCAAGCTCCT +
Preference number: 6 (lower is better)
Translates to: HRPRVVDDISSH*GLQEGTLSQAP
Trigger: AGGAGCTTGGCTGAGAGTGCCCTCTTGGAGCCCCAAGTGAGAAGATATATCATCTACAACTCGAGGCCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288502.9
ENST00000374049.4
ENST00000471206.1
CDS CAA 72 bp GTATTGTCAATCCGGAGAACAGTGAGGACCTGGCCATaGTGGAGCTCTGGAAGCAGACCAGAAGCTTCATCT +
Preference number: 6 (lower is better)
Translates to: VLSIRRTVRTWP*WSSGSRPEASS
Trigger: AGATGAAGCTTCTGGTCTGCTTCCAGAGCTCCACAATGGCCAGGTCCTCACTGTTCTCCGGATTGACAATAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471206.1