RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM266 (Homo sapiens)

Ensembl gene IDs: ENSG00000169758

Ensembl transcript IDs: ENST00000388942.8, ENST00000484722.5, ENST00000558249.1, ENST00000559079.5, ENST00000561302.5

Found 536 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCGGCCTCCAACACTTTGAAGCGGCTGCGCGGCTGGCTGAGCACGTaGGGGGCCTGGAGCGCCGCTTCGCGCTCGGCAGCCAGGTCCAGG +
Preference number: 1 (lower is better)
Translates to: PASNTLKRLRGWLST*GAWSAASRSAARSR
Trigger: CCTGGACCTGGCTGCCGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR CCA 90 bp TCGTCCCACGTGCCGGCCTCCAACACTTTGAAGCGGCTGCGCGGCTaGCTGAGCACGTGCGGGGCCTGGAGCGCCGCTTCGCGCTCGGCA +
Preference number: 1 (lower is better)
Translates to: SSHVPASNTLKRLRG*LSTCGAWSAASRSA
Trigger: TGCCGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGGCACGTGGGACGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR CCA 90 bp AACACTTTGAAGCGGCTGCGCGGCTGGCTGAGCACGTGCGGGGCCTaGAGCGCCGCTTCGCGCTCGGCAGCCAGGTCCAGGTCCTGCTGC +
Preference number: 1 (lower is better)
Translates to: NTLKRLRGWLSTCGA*SAASRSAARSRSCC
Trigger: GCAGCAGGACCTGGACCTGGCTGCCGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR GCA 90 bp GGGGAGAAGGGCCGGGCTCAGAGGACGGCTCCTCGCGGGCAGTGCTaGAGTCCATGGAGGAGCCCAGCGTCTGGCTGCTGTCACTCTGGG +
Preference number: 1 (lower is better)
Translates to: GEKGRAQRTAPRGQC*SPWRSPASGCCHSG
Trigger: CCCAGAGTGACAGCAGCCAGACGCTGGGCTCCTCCATGGACTGCAGCACTGCCCGCGAGGAGCCGTCCTCTGAGCCCGGCCCTTCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR GCA 90 bp GCGGGGGAGAAGGGCCGGGCTCAGAGGACGGCTCCTCGCGGGCAGTaGTGCAGTCCATGGAGGAGCCCAGCGTCTGGCTGCTGTCACTCT +
Preference number: 1 (lower is better)
Translates to: AGEKGRAQRTAPRGQ*CSPWRSPASGCCHS
Trigger: AGAGTGACAGCAGCCAGACGCTGGGCTCCTCCATGGACTGCAGCACTGCCCGCGAGGAGCCGTCCTCTGAGCCCGGCCCTTCTCCCCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR CCA 90 bp GTGCTGCAGTCCATGGAGGAGCCCAGCGTCTGGCTGCTGTCACTCTaGGCCCGGGTGACTGAGCTGCGGGAGGCACTCTCCGAGGTGGCG +
Preference number: 1 (lower is better)
Translates to: VLQSMEEPSVWLLSL*ARVTELREALSEVA
Trigger: CGCCACCTCGGAGAGTGCCTCCCGCAGCTCAGTCACCCGGGCCCAGAGTGACAGCAGCCAGACGCTGGGCTCCTCCATGGACTGCAGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR TCA 90 bp CACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTaGGGTCTGAAGCTTGTGGCCTCCTGGCCTGGCGTCGCCTCCCTG +
Preference number: 1 (lower is better)
Translates to: HPPLSRARRGASSGL*GLKLVASWPGVASL
Trigger: CAGGGAGGCGACGCCAGGCCAGGAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR CCA 90 bp CGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCTCTaGGCTTTGAGGTCTGAAGCTTGTGGCCTCCTGGCCTGGCGTCGC +
Preference number: 1 (lower is better)
Translates to: RAPPSPEQGEKRRQL*ALRSEACGLLAWRR
Trigger: GCGACGCCAGGCCAGGAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR TCA 90 bp CCCCGCGTGTGGCCCTTGGCAGCCTCCAGGGTCCCAGGAGAGCTTTaGGATGGCTGTCTCCCCTCATCTCACCCAGCCCATGGCAGGCTC +
Preference number: 1 (lower is better)
Translates to: PRVWPLAASRVPGEL*DGCLPSSHPAHGRL
Trigger: GAGCCTGCCATGGGCTGGGTGAGATGAGGGGAGACAGCCATCTCAAAGCTCTCCTGGGACCCTGGAGGCTGCCAAGGGCCACACGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR CCA 90 bp CGTGTGGCCCTTGGCAGCCTCCAGGGTCCCAGGAGAGCTTTGAGATaGCTGTCTCCCCTCATCTCACCCAGCCCATGGCAGGCTCTAGGC +
Preference number: 1 (lower is better)
Translates to: RVALGSLQGPRRALR*LSPLISPSPWQALG
Trigger: GCCTAGAGCCTGCCATGGGCTGGGTGAGATGAGGGGAGACAGCCATCTCAAAGCTCTCCTGGGACCCTGGAGGCTGCCAAGGGCCACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR TCA 90 bp GGGAGGCACTCTCCGAGGTGGCGCTGGTGCCATTACCGCCGAGTTTaGGGGGCATGTCCAGAGAGAAGAGGTCCGAGGAGATGTTGGGCT +
Preference number: 1 (lower is better)
Translates to: GRHSPRWRWCHYRRV*GACPERRGPRRCWA
Trigger: AGCCCAACATCTCCTCGGACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGTAATGGCACCAGCGCCACCTCGGAGAGTGCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR GCA 90 bp CAGAGAGAAGAGGTCCGAGGAGATGTTGGGCTGGTGAATGTCTATTaGGGCCGTGGTGACCATACACACAGCTGGCTCTGGGACACCGCT +
Preference number: 1 (lower is better)
Translates to: QREEVRGDVGLVNVY*GRGDHTHSWLWDTA
Trigger: AGCGGTGTCCCAGAGCCAGCTGTGTGTATGGTCACCACGGCCGCAATAGACATTCACCAGCCCAACATCTCCTCGGACCTCTTCTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR TCA 90 bp AGGGGCATGTCCAGAGAGAAGAGGTCCGAGGAGATGTTGGGCTGGTaGATGTCTATTGCGGCCGTGGTGACCATACACACAGCTGGCTCT +
Preference number: 1 (lower is better)
Translates to: RGMSREKRSEEMLGW*MSIAAVVTIHTAGS
Trigger: AGAGCCAGCTGTGTGTATGGTCACCACGGCCGCAATAGACATTCACCAGCCCAACATCTCCTCGGACCTCTTCTCTCTGGACATGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR TCA 90 bp GCTCTGGGACACCGCTGTCACTGCTGGGCCCATTGTAATACTGACTaGTGTAGCTGTTCATGTCGTCCTTCATCGTGGCTTCTTGCGAGG +
Preference number: 1 (lower is better)
Translates to: ALGHRCHCWAHCNTD*CSCSCRPSSWLLAR
Trigger: CCTCGCAAGAAGCCACGATGAAGGACGACATGAACAGCTACATCAGTCAGTATTACAATGGGCCCAGCAGTGACAGCGGTGTCCCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR GCA 90 bp CCACCTGCTGCTGGGATGGCAGCGGCGGGGGAGAAGGGCCGGGCTCAGAGGACGGGCTGGCTGAGCACGTaGGGGGCCTGGAGCGCCGCT +
Preference number: 2 (lower is better)
Translates to: PPAAGMAAAGEKGRAQRTGWLST*GAWSAA
Trigger: AGCGGCGCTCCAGGCCCCGCACGTGCTCAGCCAGCC...CGTCCTCTGAGCCCGGCCCTTCTCCCCCGCCGCTGCCATCCCAGCAGCAGGTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR CCA 90 bp TGTGTTCCAGCTCGGGGCTGGTTTGGGCCGAGCCCGCTGGGCTGGGCCGGGCGAAGCACGTGCGGGGCCTaGAGCGCCGCTTCGCGCTCG +
Preference number: 2 (lower is better)
Translates to: CVPARGWFGPSPLGWAGRSTCGA*SAASRS
Trigger: CGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCT...TCGCCCGGCCCAGCCCAGCGGGCTCGGCCCAAACCAGCCCCGAGCTGGAACACA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR CAA 90 bp CTCTCGGCCGCCGTCTCCTCGTCCCACGTGCCGGCCTCCAACACTTaGAAGCGGCTGCGCGGCTGGCTGAGCACGTGCGGGGCCTGGAGC +
Preference number: 2 (lower is better)
Translates to: LSAAVSSSHVPASNT*KRLRGWLSTCGAWS
Trigger: GCTCCAGGCCCCGCACGTGCTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGGCACGTGGGACGAGGAGACGGCGGCCGAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR TCA 90 bp CCACCTGCTGCTGGGATGGCAGCGGCGGGGGAGAAGGGCCGGGCTCAGAGGACGCGGCCTCCAACACTTTaGAGCGGCTGCGCGGCTGGC +
Preference number: 2 (lower is better)
Translates to: PPAAGMAAAGEKGRAQRTRPPTL*SGCAAG
Trigger: GCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCG...CGTCCTCTGAGCCCGGCCCTTCTCCCCCGCCGCTGCCATCCCAGCAGCAGGTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR TCA 90 bp CATCCTGTGTTCCAGCTCGGGGCTGGTTTGGGCCGAGCCCGCTGGGCTGGGCCGCGGCCTCCAACACTTTaGAGCGGCTGCGCGGCTGGC +
Preference number: 2 (lower is better)
Translates to: HPVFQLGAGLGRARWAGPRPPTL*SGCAAG
Trigger: GCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCG...CGGCCCAGCCCAGCGGGCTCGGCCCAAACCAGCCCCGAGCTGGAACACAGGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561302.5
3UTR-3UTR GCA 90 bp TGTGTTCCAGCTCGGGGCTGGTTTGGGCCGAGCCCGCTGGGCTGGGCCGGGCGACCTCGCGGGCAGTGCTaGAGTCCATGGAGGAGCCCA +
Preference number: 2 (lower is better)
Translates to: CVPARGWFGPSPLGWAGRPRGQC*SPWRSP
Trigger: TGGGCTCCTCCATGGACTGCAGCACTGCCCGCGAGG...TCGCCCGGCCCAGCCCAGCGGGCTCGGCCCAAACCAGCCCCGAGCTGGAACACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR CCA 90 bp GGGATGGCAGCGGCGGGGGAGAAGGGCCGGGCTCAGAGGACGGCTCCTCGCGGGGGCTCCTGGGTCCATTaGCCACAGTGGATGCCACCA +
Preference number: 2 (lower is better)
Translates to: GMAAAGEKGRAQRTAPRGGSWVH*PQWMPP
Trigger: TGGTGGCATCCACTGTGGCCAATGGACCCAGGAGCC...CCCGCGAGGAGCCGTCCTCTGAGCCCGGCCCTTCTCCCCCGCCGCTGCCATCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR CCA 90 bp TGTGTTCCAGCTCGGGGCTGGTTTGGGCCGAGCCCGCTGGGCTGGGCCGGGCGACGTCCCAGGGGCTCCTaGGTCCATTGGCCACAGTGG +
Preference number: 2 (lower is better)
Translates to: CVPARGWFGPSPLGWAGRRPRGS*VHWPQW
Trigger: CCACTGTGGCCAATGGACCCAGGAGCCCCTGGGACG...TCGCCCGGCCCAGCCCAGCGGGCTCGGCCCAAACCAGCCCCGAGCTGGAACACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR CCA 90 bp TGTGTTCCAGCTCGGGGCTGGTTTGGGCCGAGCCCGCTGGGCTGGGCCGGGCGAGGGTCCAAGGCCTTCTaGGAAGGGCAGGGGTCCTCC +
Preference number: 2 (lower is better)
Translates to: CVPARGWFGPSPLGWAGRGSKAF*EGQGSS
Trigger: GGAGGACCCCTGCCCTTCCCAGAAGGCCTTGGACCC...TCGCCCGGCCCAGCCCAGCGGGCTCGGCCCAAACCAGCCCCGAGCTGGAACACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR CCA 90 bp AGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGAGCTCGGGGCTGGTTTaGGCCGAGCCCGCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: SHEHHPPLSRARRGASSGSSGLV*AEPAGL
Trigger: CAGCCCAGCGGGCTCGGCCCAAACCAGCCCCGAGCT...CCCAGAGCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR-3UTR TCA 90 bp AACACTTTGAAGCGGCTGCGCGGCTGGCTGAGCACGTGCGGGGCCTGGAGCGCCAGCACCACCCTCCCCTaGGCAGGGCGAGAAGAGGCG +
Preference number: 2 (lower is better)
Translates to: NTLKRLRGWLSTCGAWSASTTLP*AGREEA
Trigger: CGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCT...GGCGCTCCAGGCCCCGCACGTGCTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR-3UTR TCA 90 bp GGCACTCTCCGAGGTGGCGCTGGTGCCATTACCGCCGAGTTTGAGGGGCATGTCGGCTGCGCGGCTGGCTaGGCACGTGCGGGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: GTLRGGAGAITAEFEGHVGCAAG*ARAGPG
Trigger: TCCAGGCCCCGCACGTGCTCAGCCAGCCGCGCAGCC...GACATGCCCCTCAAACTCGGCGGTAATGGCACCAGCGCCACCTCGGAGAGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR GCA 90 bp CCACCTGCTGCTGGGATGGCAGCGGCGGGGGAGAAGGGCCGGGCTCAGAGGACGAGGTGCGCGCGCAGCTaGCGGATCTCAAACCCTTGC +
Preference number: 2 (lower is better)
Translates to: PPAAGMAAAGEKGRAQRTRCARS*RISNPC
Trigger: GCAAGGGTTTGAGATCCGGCAGCTGCGCGCGCACCT...CGTCCTCTGAGCCCGGCCCTTCTCCCCCGCCGCTGCCATCCCAGCAGCAGGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR GCA 90 bp AAACCCAGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCTCCTGCTGCGCCAGGTaGGCGCGCAGCTGCCGGATC +
Preference number: 2 (lower is better)
Translates to: KPSHEHHPPLSRARRGASSCCAR*ARSCRI
Trigger: GATCCGGCAGCTGCGCGCGCACCTGGCGCAGCAGGA...GCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCTGGGTTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR-3UTR GCA 90 bp CCACCTGCTGCTGGGATGGCAGCGGCGGGGGAGAAGGGCCGGGCTCAGAGGACGGCTTCTTGCGAGGGCTaGAGCTCCTCCACGACGCTC +
Preference number: 2 (lower is better)
Translates to: PPAAGMAAAGEKGRAQRTASCEG*SSSTTL
Trigger: GAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGC...CGTCCTCTGAGCCCGGCCCTTCTCCCCCGCCGCTGCCATCCCAGCAGCAGGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR CCA 90 bp GGGCTGGACAGCCCCTGCTCACAGTGCTGTTCCCTAGAGTCCAGGGTGGGCGTCCTGAGGGAGGCCAGGTaGGCTCCTGGGCCCCGCGTG +
Preference number: 2 (lower is better)
Translates to: GLDSPCSQCCSLESRVGVLREAR*APGPRV
Trigger: CACGCGGGGCCCAGGAGCCCACCTGGCCTCCCTCAG...GACGCCCACCCTGGACTCTAGGGAACAGCACTGTGAGCAGGGGCTGTCCAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR TCA 90 bp GGGATGGCAGCGGCGGGGGAGAAGGGCCGGGCTCAGAGGACGGCTCCTCGCGGGTCAAACCCTTGCTCCTaGCAGATCTGCGTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: GMAAAGEKGRAQRTAPRGSNPCS*QICVSL
Trigger: GAGGCTGACGCAGATCTGTCAGGAGCAAGGGTTTGA...CCCGCGAGGAGCCGTCCTCTGAGCCCGGCCCTTCTCCCCCGCCGCTGCCATCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR CAA 90 bp CCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTaGAGGTCTGAAGCTTGTGGCCTCCTGGCCTGGCGTCGCCTCCCT +
Preference number: 2 (lower is better)
Translates to: PPSPEQGEKRRQLWA*RSEACGLLAWRRLP
Trigger: AGGGAGGCGACGCCAGGCCAGGAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR TCA 90 bp CTGGCTGAGCACGTGCGGGGCCTGGAGCGCCGCTTCGCGCTCGGCAGCCAGGTCGGACGTAGGCATCAATaGCCCTCTTCACCCTCCAGA +
Preference number: 2 (lower is better)
Translates to: LAEHVRGLERRFALGSQVGRRHQ*PSSPSR
Trigger: TCTGGAGGGTGAAGAGGGTCATTGATGCCTACGTCC...GACCTGGCTGCCGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCTCAGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR CAA 90 bp GCCCCGCGTGTGGCCCTTGGCAGCCTCCAGGGTCCCAGGAGAGCTTaGAGATGGCTGTCTCCCCTCATCTCACCCAGCCCATGGCAGGCT +
Preference number: 2 (lower is better)
Translates to: APRVALGSLQGPRRA*RWLSPLISPSPWQA
Trigger: AGCCTGCCATGGGCTGGGTGAGATGAGGGGAGACAGCCATCTCAAAGCTCTCCTGGGACCCTGGAGGCTGCCAAGGGCCACACGCGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR CCA 90 bp CAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCCCCGCGTGTGGCCCTTaGCAGCCTCCAGGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: QGEKRRQLWALRSEACGLPACGP*QPPGSQ
Trigger: CTGGGACCCTGGAGGCTGCCAAGGGCCACACGCGGG...GAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR CCA 90 bp CCACCTGCTGCTGGGATGGCAGCGGCGGGGGAGAAGGGCCGGGCTCAGAGGACGTCCACCCAGGATTCCTaGGAAAGACGGCTTAGGGGT +
Preference number: 2 (lower is better)
Translates to: PPAAGMAAAGEKGRAQRTSTQDS*ERRLRG
Trigger: ACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGA...CGTCCTCTGAGCCCGGCCCTTCTCCCCCGCCGCTGCCATCCCAGCAGCAGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR-3UTR TCA 90 bp AGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGGTCCCAGGAGAGCTTTaGGATGGCTGTCTCCCCTCA +
Preference number: 2 (lower is better)
Translates to: SHEHHPPLSRARRGASSGVPGEL*DGCLPS
Trigger: TGAGGGGAGACAGCCATCTCAAAGCTCTCCTGGGAC...CCCAGAGCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR TCA 90 bp TGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGGCTGGACAGCAGCACCACCCTCCCCTaGGCAGGGCGAGAAGAGGCG +
Preference number: 2 (lower is better)
Translates to: WTPPRIPGKDGLGVGLDSSTTLP*AGREEA
Trigger: CGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCT...GCTGTCCAGCCCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR TCA 90 bp GGGCTGGACAGCCCCTGCTCACAGTGCTGTTCCCTAGAGTCCAGGGTGGGCGTCCACACTCTACCCTGCTaGAGCTGGGCCACAGGCTGG +
Preference number: 2 (lower is better)
Translates to: GLDSPCSQCCSLESRVGVHTLPC*SWATGW
Trigger: CCAGCCTGTGGCCCAGCTTCAGCAGGGTAGAGTGTG...GACGCCCACCCTGGACTCTAGGGAACAGCACTGTGAGCAGGGGCTGTCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR CCA 90 bp GGGATGGCAGCGGCGGGGGAGAAGGGCCGGGCTCAGAGGACGGCTCCTCGCGGGCATAGGCTCAGATGGTaGTCTCCGTGTGATTGTGTT +
Preference number: 2 (lower is better)
Translates to: GMAAAGEKGRAQRTAPRGHRLRW*SPCDCV
Trigger: AACACAATCACACGGAGACCACCATCTGAGCCTATG...CCCGCGAGGAGCCGTCCTCTGAGCCCGGCCCTTCTCCCCCGCCGCTGCCATCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR-3UTR CCA 90 bp CAGAGGACGGCTCCTCGCGGGCAGTGCTGCAGTCCATGGAGGAGCCCAGCGTCTGGCTCCTGGGTCCATTaGCCACAGTGGATGCCACCA +
Preference number: 2 (lower is better)
Translates to: QRTAPRGQCCSPWRSPASGSWVH*PQWMPP
Trigger: TGGTGGCATCCACTGTGGCCAATGGACCCAGGAGCC...AGACGCTGGGCTCCTCCATGGACTGCAGCACTGCCCGCGAGGAGCCGTCCTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR CCA 90 bp TCCTTCATCGTGGCTTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCCGTCCCAGGGGCTCCTaGGTCCATTGGCCACAGTGG +
Preference number: 2 (lower is better)
Translates to: SFIVASCEGCSSSTTLSARPRGS*VHWPQW
Trigger: CCACTGTGGCCAATGGACCCAGGAGCCCCTGGGACG...GGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGCCACGATGAAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR GCA 90 bp CTGCGGGAGGCACTCTCCGAGGTGGCGCTGGTGCCATTACCGCCGAGTTTGAGGGGGCTGGACAGCCCCTaGTCACAGTGCTGTTCCCTA +
Preference number: 2 (lower is better)
Translates to: LREALSEVALVPLPPSLRGLDSP*SQCCSL
Trigger: TAGGGAACAGCACTGTGAGCAGGGGCTGTCCAGCCC...CCTCAAACTCGGCGGTAATGGCACCAGCGCCACCTCGGAGAGTGCCTCCCGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR CAA 90 bp CGGGAGGCACTCTCCGAGGTGGCGCTGGTGCCATTACCGCCGAGTTaGAGGGGCATGTCCAGAGAGAAGAGGTCCGAGGAGATGTTGGGC +
Preference number: 2 (lower is better)
Translates to: REALSEVALVPLPPS*RGMSREKRSEEMLG
Trigger: GCCCAACATCTCCTCGGACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGTAATGGCACCAGCGCCACCTCGGAGAGTGCCTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR GCA 90 bp CGTCTCCTCGTCCCACGTGCCGGCCTCCAACACTTTGAAGCGGCTGCGCGGCTGGTCAGCCTCTCCAGCTaGTCGTCTTGGATGACCTTG +
Preference number: 2 (lower is better)
Translates to: RLLVPRAGLQHFEAAARLVSLSS*SSWMTL
Trigger: CAAGGTCATCCAAGACGAGCAGCTGGAGAGGCTGAC...CAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGGCACGTGGGACGAGGAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR GCA 90 bp CTGCGGGAGGCACTCTCCGAGGTGGCGCTGGTGCCATTACCGCCGAGTTTGAGGTTCATCGTGGCTTCTTaGGAGGGCTGCAGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: LREALSEVALVPLPPSLRFIVAS*EGCSSS
Trigger: GGAGGAGCTGCAGCCCTCGCAAGAAGCCACGATGAA...CCTCAAACTCGGCGGTAATGGCACCAGCGCCACCTCGGAGAGTGCCTCCCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR CCA 90 bp GGAGATGTTGGGCTGGTGAATGTCTATTGCGGCCGTGGTGACCATACACACAGCCTGAGGGAGGCCAGGTaGGCTCCTGGGCCCCGCGTG +
Preference number: 2 (lower is better)
Translates to: GDVGLVNVYCGRGDHTHSLREAR*APGPRV
Trigger: CACGCGGGGCCCAGGAGCCCACCTGGCCTCCCTCAG...GCTGTGTGTATGGTCACCACGGCCGCAATAGACATTCACCAGCCCAACATCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR-3UTR CCA 90 bp CGTGGCTTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCGCCGTCTCAGGAGAGCTTTGAGATaGCTGTCTCCCCTCATCTCA +
Preference number: 2 (lower is better)
Translates to: RGFLRGLQLLHDALGRRLRRALR*LSPLIS
Trigger: TGAGATGAGGGGAGACAGCCATCTCAAAGCTCTCCT...GAGACGGCGGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR-3UTR CCA 90 bp CGTGGCTTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCGCCGTCTCGCCTTCTCGTACTGCTaGATAACCATCTCCATCTCC +
Preference number: 2 (lower is better)
Translates to: RGFLRGLQLLHDALGRRLAFSYC*ITISIS
Trigger: GGAGATGGAGATGGTTATCCAGCAGTACGAGAAGGC...GAGACGGCGGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR CCA 90 bp CTGCGGGAGGCACTCTCCGAGGTGGCGCTGGTGCCATTACCGCCGAGTTTGAGGTCCAGCTGCTCGTCTTaGATGACCTTGGCCTTCTCG +
Preference number: 2 (lower is better)
Translates to: LREALSEVALVPLPPSLRSSCSS*MTLAFS
Trigger: CGAGAAGGCCAAGGTCATCCAAGACGAGCAGCTGGA...CCTCAAACTCGGCGGTAATGGCACCAGCGCCACCTCGGAGAGTGCCTCCCGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR CCA 90 bp CTGCGGGAGGCACTCTCCGAGGTGGCGCTGGTGCCATTACCGCCGAGTTTGAGGTGTCGTCCTTCATCGTaGCTTCTTGCGAGGGCTGCA +
Preference number: 2 (lower is better)
Translates to: LREALSEVALVPLPPSLRCRPSS*LLARAA
Trigger: TGCAGCCCTCGCAAGAAGCCACGATGAAGGACGACA...CCTCAAACTCGGCGGTAATGGCACCAGCGCCACCTCGGAGAGTGCCTCCCGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR CCA 90 bp GAGACTCCATCCTGTGTTCCAGCTCGGGGCTGGTTTGGGCCGAGCCCGCTGGGCCACCGCTGTCACTGCTaGGCCCATTGTAATACTGAC +
Preference number: 2 (lower is better)
Translates to: ETPSCVPARGWFGPSPLGHRCHC*AHCNTD
Trigger: GTCAGTATTACAATGGGCCCAGCAGTGACAGCGGTG...GCCCAGCGGGCTCGGCCCAAACCAGCCCCGAGCTGGAACACAGGATGGAGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561302.5
3UTR-3UTR TCA 90 bp GGCACTCTCCGAGGTGGCGCTGGTGCCATTACCGCCGAGTTTGAGGGGCATGTCGCTGCTCGTCTTGGATaGCCTTGGCCTTCTCGTACT +
Preference number: 2 (lower is better)
Translates to: GTLRGGAGAITAEFEGHVAARLG*PWPSRT
Trigger: AGTACGAGAAGGCCAAGGTCATCCAAGACGAGCAGC...GACATGCCCCTCAAACTCGGCGGTAATGGCACCAGCGCCACCTCGGAGAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR CCA 90 bp CTCGTCCCACGTGCCGGCCTCCAACACTTTGAAGCGGCTGCGCGGCTGGCTGAGCATCTCCAGCTTCACTaGCAGGACGTAGGCATCAAT +
Preference number: 2 (lower is better)
Translates to: LVPRAGLQHFEAAARLAEHLQLH*QDVGIN
Trigger: ATTGATGCCTACGTCCTGCCAGTGAAGCTGGAGATG...CTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGGCACGTGGGACGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR CCA 90 bp CTGCGGGAGGCACTCTCCGAGGTGGCGCTGGTGCCATTACCGCCGAGTTTGAGGGCCTTCTCGTACTGCTaGATAACCATCTCCATCTCC +
Preference number: 2 (lower is better)
Translates to: LREALSEVALVPLPPSLRAFSYC*ITISIS
Trigger: GGAGATGGAGATGGTTATCCAGCAGTACGAGAAGGC...CCTCAAACTCGGCGGTAATGGCACCAGCGCCACCTCGGAGAGTGCCTCCCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR TCA 90 bp GGTGGTCTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTGGGCTTTGAGGTCTaGAGCTTGTGGCCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: GGLRVIVLDSTQDSWERRLGFEV*SLWPPG
Trigger: GCCAGGAGGCCACAAGCTTCAGACCTCAAAGCCCAG...CCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCACACGGAGACCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR GCA 90 bp GATGTAGCTGTTCATGTCGTCCTTCATCGTGGCTTCTTGCGAGGGCTGCAGCTCAGGTGCGCGCGCAGCTaGCGGATCTCAAACCCTTGC +
Preference number: 2 (lower is better)
Translates to: DVAVHVVLHRGFLRGLQLRCARS*RISNPC
Trigger: GCAAGGGTTTGAGATCCGGCAGCTGCGCGCGCACCT...GAGCTGCAGCCCTCGCAAGAAGCCACGATGAAGGACGACATGAACAGCTACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR CCA 90 bp ATTACCGCCGAGTTTGAGGGGCATGTCCAGAGAGAAGAGGTCCGAGGAGATGTTAAGCTTGTGGCCTCCTaGCCTGGCGTCGCCTCCCTG +
Preference number: 2 (lower is better)
Translates to: ITAEFEGHVQREEVRGDVKLVAS*PGVASL
Trigger: CAGGGAGGCGACGCCAGGCCAGGAGGCCACAAGCTT...AACATCTCCTCGGACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR-3UTR TCA 90 bp GGAGATGTTGGGCTGGTGAATGTCTATTGCGGCCGTGGTGACCATACACACAGCCTGGGCTTTGAGGTCTaGAGCTTGTGGCCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: GDVGLVNVYCGRGDHTHSLGFEV*SLWPPG
Trigger: GCCAGGAGGCCACAAGCTTCAGACCTCAAAGCCCAG...GCTGTGTGTATGGTCACCACGGCCGCAATAGACATTCACCAGCCCAACATCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR-3UTR GCA 90 bp GGCGCTGGTGCCATTACCGCCGAGTTTGAGGGGCATGTCCAGAGAGAAGAGGTCATTGGCCACAGTGGATaGCACCATCGGAGCCAAAGA +
Preference number: 2 (lower is better)
Translates to: GAGAITAEFEGHVQREEVIGHSG*HHRSQR
Trigger: TCTTTGGCTCCGATGGTGGCATCCACTGTGGCCAAT...GACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGTAATGGCACCAGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR CAA 90 bp CCCAGCCCATGGCAGGCTCTAGGCCTCAGGGACCCTGTGCAGCTTTaGCTCTTTGGATTCCAAAGATCTGAACTTGTCCTCCAGCATGGG +
Preference number: 2 (lower is better)
Translates to: PSPWQALGLRDPVQL*LFGFQRSELVLQHG
Trigger: CCCATGCTGGAGGACAAGTTCAGATCTTTGGAATCCAAAGAGCAAAAGCTGCACAGGGTCCCTGAGGCCTAGAGCCTGCCATGGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR-3UTR TCA 90 bp TGGCAGGACGTAGGCATCAATGACCCTCTTCACCCTCCAGATCCGGAGCATGATGTCCCAGGAGAGCTTTaGGATGGCTGTCTCCCCTCA +
Preference number: 2 (lower is better)
Translates to: WQDVGINDPLHPPDPEHDVPGEL*DGCLPS
Trigger: TGAGGGGAGACAGCCATCTCAAAGCTCTCCTGGGAC...ATCATGCTCCGGATCTGGAGGGTGAAGAGGGTCATTGATGCCTACGTCCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR-3UTR CCA 90 bp GGTGGTCTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGAAGAGGCGCCAGCTCTaGGCTTTGAGGTCTGAAGCT +
Preference number: 2 (lower is better)
Translates to: GGLRVIVLDSTQDSWERRKRRQL*ALRSEA
Trigger: AGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTT...CCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCACACGGAGACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR CCA 90 bp GGCGCTGGTGCCATTACCGCCGAGTTTGAGGGGCATGTCCAGAGAGAAGAGGTCCATCTCCAGCTTCACTaGCAGGACGTAGGCATCAAT +
Preference number: 2 (lower is better)
Translates to: GAGAITAEFEGHVQREEVHLQLH*QDVGIN
Trigger: ATTGATGCCTACGTCCTGCCAGTGAAGCTGGAGATG...GACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGTAATGGCACCAGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR CAA 90 bp CCCTTGCTCCTGACAGATCTGCGTCAGCCTCTCCAGCTGCTCGTCTaGGATGACCTTGGCCTTCTCGTACTGCTGGATAACCATCTCCAT +
Preference number: 2 (lower is better)
Translates to: PLLLTDLRQPLQLLV*DDLGLLVLLDNHLH
Trigger: ATGGAGATGGTTATCCAGCAGTACGAGAAGGCCAAGGTCATCCAAGACGAGCAGCTGGAGAGGCTGACGCAGATCTGTCAGGAGCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR TCA 90 bp GGCACTCTCCGAGGTGGCGCTGGTGCCATTACCGCCGAGTTTGAGGGGCATGTCAAACTAGATTCGTCTTaGAGAGACTCAGAAACGCTC +
Preference number: 2 (lower is better)
Translates to: GTLRGGAGAITAEFEGHVKLDSS*RDSETL
Trigger: GAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTT...GACATGCCCCTCAAACTCGGCGGTAATGGCACCAGCGCCACCTCGGAGAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR-3UTR TCA 90 bp CTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGCTGCTCGTCTTGGATaGCCTTGGCCTTCTCGTACT +
Preference number: 2 (lower is better)
Translates to: LRVIVLDSTQDSWERRLRAARLG*PWPSRT
Trigger: AGTACGAGAAGGCCAAGGTCATCCAAGACGAGCAGC...CCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCACACGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR-3UTR GCA 90 bp CAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCACTCAGAAACGCTCATaGTGGAATGAGAATGAGGAC +
Preference number: 2 (lower is better)
Translates to: QGEKRRQLWALRSEACGLTQKRS*WNENED
Trigger: GTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGT...GAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR CCA 90 bp ATAGGCTCAGATGGTGGTCTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCGTCCATTGGCCACAGTaGATGCCACCATCGGAGCCA +
Preference number: 2 (lower is better)
Translates to: IGSDGGLRVIVLDSTQDSVHWPQ*MPPSEP
Trigger: TGGCTCCGATGGTGGCATCCACTGTGGCCAATGGAC...GGAATCCTGGGTGGAGTCCAACACAATCACACGGAGACCACCATCTGAGCCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR-3UTR CCA 90 bp CAGCTGCTCGTCTTGGATGACCTTGGCCTTCTCGTACTGCTGGATAACCATCTCGTCCATTGGCCACAGTaGATGCCACCATCGGAGCCA +
Preference number: 2 (lower is better)
Translates to: QLLVLDDLGLLVLLDNHLVHWPQ*MPPSEP
Trigger: TGGCTCCGATGGTGGCATCCACTGTGGCCAATGGAC...GAGATGGTTATCCAGCAGTACGAGAAGGCCAAGGTCATCCAAGACGAGCAGCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR CCA 90 bp CTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGACTTGTCCTCCAGCATaGGCACAGTGGGCTGGAAGT +
Preference number: 2 (lower is better)
Translates to: LRVIVLDSTQDSWERRLRTCPPA*AQWAGS
Trigger: ACTTCCAGCCCACTGTGCCCATGCTGGAGGACAAGT...CCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCACACGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR CAA 90 bp AGGACAAATGACATAGGCTCAGATGGTGGTCTCCGTGTGATTGTGTaGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: RTNDIGSDGGLRVIV*DSTQDSWERRLRGG
Trigger: CCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCACACGGAGACCACCATCTGAGCCTATGTCATTTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR TCA 90 bp ATTACCGCCGAGTTTGAGGGGCATGTCCAGAGAGAAGAGGTCCGAGGAGATGTTGGACGTAGGCATCAATaGCCCTCTTCACCCTCCAGA +
Preference number: 2 (lower is better)
Translates to: ITAEFEGHVQREEVRGDVGRRHQ*PSSPSR
Trigger: TCTGGAGGGTGAAGAGGGTCATTGATGCCTACGTCC...AACATCTCCTCGGACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR GCA 90 bp TTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGGCTGTTGGCCTTCTCGTACTaGTGGATAACCATCTCCATC +
Preference number: 2 (lower is better)
Translates to: LCWTPPRIPGKDGLGVGLLAFSY*WITISI
Trigger: GATGGAGATGGTTATCCAGCAGTACGAGAAGGCCAA...CAGCCCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR-3UTR CCA 90 bp ATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGACAAACCCGCGTGTGGCCCTTaGCAGCCTCCAGGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: IRLEETQKRSCWNENEDKPACGP*QPPGSQ
Trigger: CTGGGACCCTGGAGGCTGCCAAGGGCCACACGCGGG...TTTGTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTTCAAGACGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR CCA 90 bp CAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCCAGAAACGCTCATGCTaGAATGAGAATGAGGACAAA +
Preference number: 2 (lower is better)
Translates to: QGEKRRQLWALRSEACGLQKRSC*NENEDK
Trigger: TTTGTCCTCATTCTCATTCCAGCATGAGCGTTTCTG...GAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR TCA 90 bp GGAGATGTTGGGCTGGTGAATGTCTATTGCGGCCGTGGTGACCATACACACAGCGAGCCAAAGATAGGATaGTCACAGCCCCGTCAAACA +
Preference number: 2 (lower is better)
Translates to: GDVGLVNVYCGRGDHTHSEPKIG*SQPRQT
Trigger: TGTTTGACGGGGCTGTGATCATCCTATCTTTGGCTC...GCTGTGTGTATGGTCACCACGGCCGCAATAGACATTCACCAGCCCAACATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR-3UTR CCA 90 bp ATCCCTTTATATCCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGAGGCCAGGTGGGCTCCTaGGCCCCGCGTGTGGCCCTT +
Preference number: 2 (lower is better)
Translates to: IPLYPVKVKTRFVLKRLRGQVGS*APRVAL
Trigger: AAGGGCCACACGCGGGGCCCAGGAGCCCACCTGGCC...TCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGGATATAAAGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR TCA 90 bp ACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGCACACTCTACCCTGCTaGAGCTGGGCCACAGGCTGG +
Preference number: 2 (lower is better)
Translates to: TRFVLKRLRNAHAGMRMRHTLPC*SWATGW
Trigger: CCAGCCTGTGGCCCAGCTTCAGCAGGGTAGAGTGTG...CCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR CCA 90 bp ATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGACAAAAAGCTTGTGGCCTCCTaGCCTGGCGTCGCCTCCCTG +
Preference number: 2 (lower is better)
Translates to: IRLEETQKRSCWNENEDKKLVAS*PGVASL
Trigger: CAGGGAGGCGACGCCAGGCCAGGAGGCCACAAGCTT...TTTGTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTTCAAGACGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR TCA 90 bp AAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGACAAATGACATAGGCGCCAGCTCTGGGCTTTaGGGTCTGAAGCTTGTGGCC +
Preference number: 2 (lower is better)
Translates to: KRLRNAHAGMRMRTNDIGASSGL*GLKLVA
Trigger: GGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGC...GCCTATGTCATTTGTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR GCA 90 bp GGAGATGTTGGGCTGGTGAATGTCTATTGCGGCCGTGGTGACCATACACACAGCACTCAGAAACGCTCATaGTGGAATGAGAATGAGGAC +
Preference number: 2 (lower is better)
Translates to: GDVGLVNVYCGRGDHTHSTQKRS*WNENED
Trigger: GTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGT...GCTGTGTGTATGGTCACCACGGCCGCAATAGACATTCACCAGCCCAACATCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR-3UTR GCA 90 bp ATTACCGCCGAGTTTGAGGGGCATGTCCAGAGAGAAGAGGTCCGAGGAGATGTTTTGGCCTTCTCGTACTaGTGGATAACCATCTCCATC +
Preference number: 2 (lower is better)
Translates to: ITAEFEGHVQREEVRGDVLAFSY*WITISI
Trigger: GATGGAGATGGTTATCCAGCAGTACGAGAAGGCCAA...AACATCTCCTCGGACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR CAA 90 bp ATGGTTGTTCCCCTGCCCTCTAGGACCCTCCCACCCACCTCTAGGTaGATCCCTTTATATCCTGTGAAGGTGAAAACTAGATTCGTCTTG +
Preference number: 2 (lower is better)
Translates to: MVVPLPSRTLPPTSR*IPLYPVKVKTRFVL
Trigger: CAAGACGAATCTAGTTTTCACCTTCACAGGATATAAAGGGATCAACCTAGAGGTGGGTGGGAGGGTCCTAGAGGGCAGGGGAACAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR TCA 90 bp CCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTATGGTGGTCTCCGTGTaGTTGTGTTGGACTCCACCC +
Preference number: 2 (lower is better)
Translates to: PVKVKTRFVLKRLRNAHAMVVSV*LCWTPP
Trigger: GGGTGGAGTCCAACACAATCACACGGAGACCACCAT...AGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR TCA 90 bp CCACCCACCTCTAGGTTGATCCCTTTATATCCTGTGAAGGTGAAAACTAGATTCCATTACCGCCGAGTTTaGGGGGCATGTCCAGAGAGA +
Preference number: 2 (lower is better)
Translates to: PPTSRLIPLYPVKVKTRFHYRRV*GACPER
Trigger: TCTCTCTGGACATGCCCCTCAAACTCGGCGGTAATG...GAATCTAGTTTTCACCTTCACAGGATATAAAGGGATCAACCTAGAGGTGGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR-3UTR CCA 90 bp CCACCCACCTCTAGGTTGATCCCTTTATATCCTGTGAAGGTGAAAACTAGATTCAAGAGGCGCCAGCTCTaGGCTTTGAGGTCTGAAGCT +
Preference number: 2 (lower is better)
Translates to: PPTSRLIPLYPVKVKTRFKRRQL*ALRSEA
Trigger: AGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTT...GAATCTAGTTTTCACCTTCACAGGATATAAAGGGATCAACCTAGAGGTGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR CCA 90 bp ATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGACAAAAGGAGAGCTTTGAGATaGCTGTCTCCCCTCATCTCA +
Preference number: 2 (lower is better)
Translates to: IRLEETQKRSCWNENEDKRRALR*LSPLIS
Trigger: TGAGATGAGGGGAGACAGCCATCTCAAAGCTCTCCT...TTTGTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTTCAAGACGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR GCA 90 bp ATCCCTTTATATCCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGAATTGGCCACAGTGGATaGCACCATCGGAGCCAAAGA +
Preference number: 2 (lower is better)
Translates to: IPLYPVKVKTRFVLKRLRIGHSG*HHRSQR
Trigger: TCTTTGGCTCCGATGGTGGCATCCACTGTGGCCAAT...TCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGGATATAAAGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR CAA 90 bp AGGTTGATCCCTTTATATCCTGTGAAGGTGAAAACTAGATTCGTCTaGAAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGACA +
Preference number: 2 (lower is better)
Translates to: RLIPLYPVKVKTRFV*KRLRNAHAGMRMRT
Trigger: TGTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGGATATAAAGGGATCAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR CCA 90 bp ATCCCTTTATATCCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGACATAGGCTCAGATGGTaGTCTCCGTGTGATTGTGTT +
Preference number: 2 (lower is better)
Translates to: IPLYPVKVKTRFVLKRLRHRLRW*SPCDCV
Trigger: AACACAATCACACGGAGACCACCATCTGAGCCTATG...TCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGGATATAAAGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR TCA 90 bp ATCCCTTTATATCCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGAAAACTAGATTCGTCTTaGAGAGACTCAGAAACGCTC +
Preference number: 2 (lower is better)
Translates to: IPLYPVKVKTRFVLKRLRKLDSS*RDSETL
Trigger: GAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTT...TCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGGATATAAAGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR CCA 72 bp AAGCGGCTGCGCGGCTGGCTGAGCACGTGCGGGGCCTaGAGCGCCGCTTCGCGCTCGGCAGCCAGGTCCAGG +
Preference number: 3 (lower is better)
Translates to: KRLRGWLSTCGA*SAASRSAARSR
Trigger: CCTGGACCTGGCTGCCGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCTCAGCCAGCCGCGCAGCCGCTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR CCA 72 bp CGAGACTCCATCCTGTGTTCCAGCTCGGGGCTGGTTTaGGCCGAGCCCGCTGGGCTGGGCCGGGCGAGGGGG +
Preference number: 3 (lower is better)
Translates to: RDSILCSSSGLV*AEPAGLGRARG
Trigger: CCCCCTCGCCCGGCCCAGCCCAGCGGGCTCGGCCCAAACCAGCCCCGAGCTGGAACACAGGATGGAGTCTCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561302.5
3UTR GCA 72 bp AACACTTTGAAGCGGCTGCGCGGCTGGCTGAGCACGTaGGGGGCCTGGAGCGCCGCTTCGCGCTCGGCAGCC +
Preference number: 3 (lower is better)
Translates to: NTLKRLRGWLST*GAWSAASRSAA
Trigger: GGCTGCCGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR CAA 90 bp AAACCCAGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCCCCCGCGTGTGGCCCTaGGCAGCCTCCAGGGTCCCA +
Preference number: 3 (lower is better)
Translates to: KPSHEHHPPLSRARRGASPRVWP*AASRVP
Trigger: TGGGACCCTGGAGGCTGCCAAGGGCCACACGCGGGG...GCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCTGGGTTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR CAA 90 bp CACGTGCCGGCCTCCAACACTTTGAAGCGGCTGCGCGGCTGGCTGAGCACGTGCCCCCGCGTGTGGCCCTaGGCAGCCTCCAGGGTCCCA +
Preference number: 3 (lower is better)
Translates to: HVPASNTLKRLRGWLSTCPRVWP*AASRVP
Trigger: TGGGACCCTGGAGGCTGCCAAGGGCCACACGCGGGG...GCACGTGCTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGGCACGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR GCA 72 bp GGCCGGGCTCAGAGGACGGCTCCTCGCGGGCAGTGCTaGAGTCCATGGAGGAGCCCAGCGTCTGGCTGCTGT +
Preference number: 3 (lower is better)
Translates to: GRAQRTAPRGQC*SPWRSPASGCC
Trigger: ACAGCAGCCAGACGCTGGGCTCCTCCATGGACTGCAGCACTGCCCGCGAGGAGCCGTCCTCTGAGCCCGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR GCA 72 bp AAGGGCCGGGCTCAGAGGACGGCTCCTCGCGGGCAGTaGTGCAGTCCATGGAGGAGCCCAGCGTCTGGCTGC +
Preference number: 3 (lower is better)
Translates to: KGRAQRTAPRGQ*CSPWRSPASGC
Trigger: GCAGCCAGACGCTGGGCTCCTCCATGGACTGCAGCACTGCCCGCGAGGAGCCGTCCTCTGAGCCCGGCCCTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR CCA 72 bp AACAGACTTACCCTGTGTTCCAGCTCGGGGCTGGTTTaGGCCGAGCCCGCTGGGCTGGGCCGGGCGAGGGGG +
Preference number: 3 (lower is better)
Translates to: NRLTLCSSSGLV*AEPAGLGRARG
Trigger: CCCCCTCGCCCGGCCCAGCCCAGCGGGCTCGGCCCAAACCAGCCCCGAGCTGGAACACAGGGTAAGTCTGTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR-3UTR CAA 90 bp CTGAGCACGTGCGGGGCCTGGAGCGCCGCTTCGCGCTCGGCAGCCAGGTCCAGGGGTCCCAGGAGAGCTTaGAGATGGCTGTCTCCCCTC +
Preference number: 3 (lower is better)
Translates to: LSTCGAWSAASRSAARSRGPRRA*RWLSPL
Trigger: GAGGGGAGACAGCCATCTCAAAGCTCTCCTGGGACC...CCTGGACCTGGCTGCCGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCTCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR-3UTR CAA 90 bp CGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCGCCGTCTCCTCGTCCCACGTGGGCTCCTGGGTCCATaGGCCACAGTGGATGCCACC +
Preference number: 3 (lower is better)
Translates to: RGLQLLHDALGRRLLVPRGLLGP*ATVDAT
Trigger: GGTGGCATCCACTGTGGCCAATGGACCCAGGAGCCC...ACGTGGGACGAGGAGACGGCGGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR CAA 90 bp CGTGGCTTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCGCCGTCTCGGGCTCCTGGGTCCATaGGCCACAGTGGATGCCACC +
Preference number: 3 (lower is better)
Translates to: RGFLRGLQLLHDALGRRLGLLGP*ATVDAT
Trigger: GGTGGCATCCACTGTGGCCAATGGACCCAGGAGCCC...GAGACGGCGGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGCCACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR CCA 72 bp CAGAACGAGACTCCATCCTGTGTTCCAGCTCGGGGCTaGTTTGGGCCGAGCCCGCTGGGCTGGGCCGGGCGA +
Preference number: 3 (lower is better)
Translates to: QNETPSCVPARG*FGPSPLGWAGR
Trigger: TCGCCCGGCCCAGCCCAGCGGGCTCGGCCCAAACCAGCCCCGAGCTGGAACACAGGATGGAGTCTCGTTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561302.5
3UTR CCA 72 bp TCCATGGAGGAGCCCAGCGTCTGGCTGCTGTCACTCTaGGCCCGGGTGACTGAGCTGCGGGAGGCACTCTCC +
Preference number: 3 (lower is better)
Translates to: SMEEPSVWLLSL*ARVTELREALS
Trigger: GGAGAGTGCCTCCCGCAGCTCAGTCACCCGGGCCCAGAGTGACAGCAGCCAGACGCTGGGCTCCTCCATGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR CCA 72 bp CGGGCAGTGCTGCAGTCCATGGAGGAGCCCAGCGTCTaGCTGCTGTCACTCTGGGCCCGGGTGACTGAGCTG +
Preference number: 3 (lower is better)
Translates to: RAVLQSMEEPSV*LLSLWARVTEL
Trigger: CAGCTCAGTCACCCGGGCCCAGAGTGACAGCAGCCAGACGCTGGGCTCCTCCATGGACTGCAGCACTGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR CCA 72 bp CAGAGGACGGCTCCTCGCGGGCAGTGCTGCAGTCCATaGAGGAGCCCAGCGTCTGGCTGCTGTCACTCTGGG +
Preference number: 3 (lower is better)
Translates to: QRTAPRGQCCSP*RSPASGCCHSG
Trigger: CCCAGAGTGACAGCAGCCAGACGCTGGGCTCCTCCATGGACTGCAGCACTGCCCGCGAGGAGCCGTCCTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR CCA 72 bp CCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCTCTaGGCTTTGAGGTCTGAAGCTTGTGGCCTCCTGGCC +
Preference number: 3 (lower is better)
Translates to: PSPEQGEKRRQL*ALRSEACGLLA
Trigger: GGCCAGGAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR TCA 72 bp CTGAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTaGGGTCTGAAGCTTGTGGCCTCCTGGCCTGGCGTC +
Preference number: 3 (lower is better)
Translates to: LSRARRGASSGL*GLKLVASWPGV
Trigger: GACGCCAGGCCAGGAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTGCTCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR CAA 90 bp CGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCCTGGCCTGGCGTCGCGGTCCCAGGAGAGCTTaGAGATGGCTGTCTCCCCTC +
Preference number: 3 (lower is better)
Translates to: RQLWALRSEACGLLAWRRGPRRA*RWLSPL
Trigger: GAGGGGAGACAGCCATCTCAAAGCTCTCCTGGGACC...GCGACGCCAGGCCAGGAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR CAA 90 bp GGCGCTGGTGCCATTACCGCCGAGTTTGAGGGGCATGTCCAGAGAGAAGAGGTCCCGGCCTCCAACACTTaGAAGCGGCTGCGCGGCTGG +
Preference number: 3 (lower is better)
Translates to: GAGAITAEFEGHVQREEVPASNT*KRLRGW
Trigger: CCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGG...GACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGTAATGGCACCAGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR CAA 90 bp TTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCGCCGTCTCCTCGTCTCGTCTTGGATGACCTaGGCCTTCTCGTACTGCTGG +
Preference number: 3 (lower is better)
Translates to: FLRGLQLLHDALGRRLLVSSWMT*AFSYCW
Trigger: CCAGCAGTACGAGAAGGCCAAGGTCATCCAAGACGA...GACGAGGAGACGGCGGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR CAA 90 bp AGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGCCACCCACCTCTAGGTaGATCCCTTTATATCCTGTG +
Preference number: 3 (lower is better)
Translates to: SHEHHPPLSRARRGASSGPPTSR*IPLYPV
Trigger: CACAGGATATAAAGGGATCAACCTAGAGGTGGGTGG...CCCAGAGCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR CAA 90 bp CGTCCTTCATCGTGGCTTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCTCCAGCTGCTCGTCTaGGATGACCTTGGCCTTCTC +
Preference number: 3 (lower is better)
Translates to: RPSSWLLARAAAPPRRSRLQLLV*DDLGLL
Trigger: GAGAAGGCCAAGGTCATCCAAGACGAGCAGCTGGAG...CCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGCCACGATGAAGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR CCA 72 bp CTTGGCAGCCTCCAGGGTCCCAGGAGAGCTTTGAGATaGCTGTCTCCCCTCATCTCACCCAGCCCATGGCAG +
Preference number: 3 (lower is better)
Translates to: LGSLQGPRRALR*LSPLISPSPWQ
Trigger: CTGCCATGGGCTGGGTGAGATGAGGGGAGACAGCCATCTCAAAGCTCTCCTGGGACCCTGGAGGCTGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR-3UTR CAA 90 bp CAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCCTCCAGCTGCTCGTCTaGGATGACCTTGGCCTTCTC +
Preference number: 3 (lower is better)
Translates to: QGEKRRQLWALRSEACGLLQLLV*DDLGLL
Trigger: GAGAAGGCCAAGGTCATCCAAGACGAGCAGCTGGAG...GAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR TCA 72 bp TCTCCGAGGTGGCGCTGGTGCCATTACCGCCGAGTTTaGGGGGCATGTCCAGAGAGAAGAGGTCCGAGGAGA +
Preference number: 3 (lower is better)
Translates to: SPRWRWCHYRRV*GACPERRGPRR
Trigger: TCTCCTCGGACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGTAATGGCACCAGCGCCACCTCGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR CCA 72 bp CTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCTaGGAAAGACGGCTTAGGGGTGGGGCTGGACAGCCC +
Preference number: 3 (lower is better)
Translates to: LRVIVLDSTQDS*ERRLRGGAGQP
Trigger: GGGCTGTCCAGCCCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCACACGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR CCA 72 bp TTGAGATGGCTGTCTCCCCTCATCTCACCCAGCCCATaGCAGGCTCTAGGCCTCAGGGACCCTGTGCAGCTT +
Preference number: 3 (lower is better)
Translates to: LRWLSPLISPSP*QALGLRDPVQL
Trigger: AAGCTGCACAGGGTCCCTGAGGCCTAGAGCCTGCCATGGGCTGGGTGAGATGAGGGGAGACAGCCATCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR-3UTR CAA 90 bp ACCGCCGAGTTTGAGGGGCATGTCCAGAGAGAAGAGGTCCGAGGAGATGTTGGGCGCCAGCTCTGGGCTTaGAGGTCTGAAGCTTGTGGC +
Preference number: 3 (lower is better)
Translates to: TAEFEGHVQREEVRGDVGRQLWA*RSEACG
Trigger: GCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCG...CCCAACATCTCCTCGGACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR GCA 72 bp GAGGTCCGAGGAGATGTTGGGCTGGTGAATGTCTATTaGGGCCGTGGTGACCATACACACAGCTGGCTCTGG +
Preference number: 3 (lower is better)
Translates to: EVRGDVGLVNVY*GRGDHTHSWLW
Trigger: CCAGAGCCAGCTGTGTGTATGGTCACCACGGCCGCAATAGACATTCACCAGCCCAACATCTCCTCGGACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR CCA 72 bp AATGTCTATTGCGGCCGTGGTGACCATACACACAGCTaGCTCTGGGACACCGCTGTCACTGCTGGGCCCATT +
Preference number: 3 (lower is better)
Translates to: NVYCGRGDHTHS*LWDTAVTAGPI
Trigger: AATGGGCCCAGCAGTGACAGCGGTGTCCCAGAGCCAGCTGTGTGTATGGTCACCACGGCCGCAATAGACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR CAA 90 bp AAACCCAGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCAAAACTAGATTCGTCTaGAAGAGACTCAGAAACGCT +
Preference number: 3 (lower is better)
Translates to: KPSHEHHPPLSRARRGASKTRFV*KRLRNA
Trigger: AGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTTT...GCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCTGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR CCA 72 bp TATTGCGGCCGTGGTGACCATACACACAGCTGGCTCTaGGACACCGCTGTCACTGCTGGGCCCATTGTAATA +
Preference number: 3 (lower is better)
Translates to: YCGRGDHTHSWL*DTAVTAGPIVI
Trigger: TATTACAATGGGCCCAGCAGTGACAGCGGTGTCCCAGAGCCAGCTGTGTGTATGGTCACCACGGCCGCAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR TCA 72 bp TCCAGAGAGAAGAGGTCCGAGGAGATGTTGGGCTGGTaGATGTCTATTGCGGCCGTGGTGACCATACACACA +
Preference number: 3 (lower is better)
Translates to: SREKRSEEMLGW*MSIAAVVTIHT
Trigger: TGTGTGTATGGTCACCACGGCCGCAATAGACATTCACCAGCCCAACATCTCCTCGGACCTCTTCTCTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR CAA 90 bp CTGGTTGAACAGACTTACCCTGTGTTCCAGCTCGGGGCTGGTTTGGGCCGAGCCAAAACTAGATTCGTCTaGAAGAGACTCAGAAACGCT +
Preference number: 3 (lower is better)
Translates to: LVEQTYPVFQLGAGLGRAKTRFV*KRLRNA
Trigger: AGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTTT...GGCTCGGCCCAAACCAGCCCCGAGCTGGAACACAGGGTAAGTCTGTTCAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR TCA 72 bp CACCGCTGTCACTGCTGGGCCCATTGTAATACTGACTaGTGTAGCTGTTCATGTCGTCCTTCATCGTGGCTT +
Preference number: 3 (lower is better)
Translates to: HRCHCWAHCNTD*CSCSCRPSSWL
Trigger: AAGCCACGATGAAGGACGACATGAACAGCTACATCAGTCAGTATTACAATGGGCCCAGCAGTGACAGCGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR-3UTR CAA 90 bp AAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGACAAATGACATAGGCCTCCGTGTGATTGTGTaGGACTCCACCCAGGATTCC +
Preference number: 3 (lower is better)
Translates to: KRLRNAHAGMRMRTNDIGLRVIV*DSTQDS
Trigger: GGAATCCTGGGTGGAGTCCAACACAATCACACGGAG...GCCTATGTCATTTGTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR TCA 72 bp CCACAGTGGATGCCACCATCGGAGCCAAAGATAGGATaGTCACAGCCCCGTCAAACACCTCTATTTTGTTTT +
Preference number: 3 (lower is better)
Translates to: PQWMPPSEPKIG*SQPRQTPLFCF
Trigger: AAAACAAAATAGAGGTGTTTGACGGGGCTGTGATCATCCTATCTTTGGCTCCGATGGTGGCATCCACTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR-3UTR CAA 90 bp TCAGTGCAGCTGGTTTTTATTATTAAAGCCAAGGTTGGAAAATGGTTGTTCCCCCCGGATCTCAAACCCTaGCTCCTGACAGATCTGCGT +
Preference number: 3 (lower is better)
Translates to: SVQLVFIIKAKVGKWLFPPDLKP*LLTDLR
Trigger: ACGCAGATCTGTCAGGAGCAAGGGTTTGAGATCCGG...GGGGAACAACCATTTTCCAACCTTGGCTTTAATAATAAAAACCAGCTGCACTGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR-3UTR CAA 90 bp ATCCCTTTATATCCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGATCCTGGTTCTTCTGGTaGAACAGACTTACCCTGTGT +
Preference number: 3 (lower is better)
Translates to: IPLYPVKVKTRFVLKRLRSWFFW*NRLTLC
Trigger: ACACAGGGTAAGTCTGTTCAACCAGAAGAACCAGGA...TCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGGATATAAAGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR TCA 90 bp GGGATGGCAGCGGCGGGGGAGAAGGGCCGGGCTCAGAGGACGGCTCCTCGCGGGCTGGGCCCGGGTGACTaGGCTGCGGGAGGCACTCTC +
Preference number: 4 (lower is better)
Translates to: GMAAAGEKGRAQRTAPRGLGPGD*AAGGTL
Trigger: GAGAGTGCCTCCCGCAGCTCAGTCACCCGGGCCCAG...CCCGCGAGGAGCCGTCCTCTGAGCCCGGCCCTTCTCCCCCGCCGCTGCCATCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp CGGCTGGCTGAGCACGTGCGGGGCCTGGAGCGCCGCTTCGCGCTCGGCAGCCAGGTTCCAGCTCGGGGCTaGTTTGGGCCGAGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: RLAEHVRGLERRFALGSQVPARG*FGPSPL
Trigger: CAGCGGGCTCGGCCCAAACCAGCCCCGAGCTGGAAC...CTGGCTGCCGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCTCAGCCAGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR TCA 90 bp CTGGCTGAGCACGTGCGGGGCCTGGAGCGCCGCTTCGCGCTCGGCAGCCAGGTCAGGCGGAGGCTGCAGTaGGCCGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: LAEHVRGLERRFALGSQVRRRLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCGGCTCACTGCAGCCTCCGCCT...GACCTGGCTGCCGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCTCAGCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561302.5
CDS-3UTR GCA 90 bp CTGAGCACGTGCGGGGCCTGGAGCGCCGCTTCGCGCTCGGCAGCCAGGTCCAGGAGCCCAGCGTCTGGCTaGTGTCACTCTGGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LSTCGAWSAASRSAARSRSPASG*CHSGPG
Trigger: CCCGGGCCCAGAGTGACAGCAGCCAGACGCTGGGCT...CCTGGACCTGGCTGCCGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCTCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp CTGAGCACGTGCGGGGCCTGGAGCGCCGCTTCGCGCTCGGCAGCCAGGTCCAGGCACCTGCTGCTGGGATaGCAGCGGCGGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LSTCGAWSAASRSAARSRHLLLG*QRRGRR
Trigger: CCTTCTCCCCCGCCGCTGCCATCCCAGCAGCAGGTG...CCTGGACCTGGCTGCCGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCTCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR TCA 90 bp GAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCGCCGTCTCCTCGTCCCACGTGCTGGGCCCGGGTGACTaGGCTGCGGGAGGCACTCTC +
Preference number: 4 (lower is better)
Translates to: EGCSSSTTLSAAVSSSHVLGPGD*AAGGTL
Trigger: GAGAGTGCCTCCCGCAGCTCAGTCACCCGGGCCCAG...CACGTGGGACGAGGAGACGGCGGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp CGGCTGGCTGAGCACGTGCGGGGCCTGGAGCGCCGCTTCGCGCTCGGCAGCCAGGCTTCTTGCGAGGGCTaGAGCTCCTCCACGACGCTC +
Preference number: 4 (lower is better)
Translates to: RLAEHVRGLERRFALGSQASCEG*SSSTTL
Trigger: GAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGC...CTGGCTGCCGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCTCAGCCAGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp GCTTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCGCCGTCTCCTCGAGCACGTGCGGGGCCTaGAGCGCCGCTTCGCGCTCG +
Preference number: 4 (lower is better)
Translates to: ASCEGCSSSTTLSAAVSSSTCGA*SAASRS
Trigger: CGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCT...CGAGGAGACGGCGGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp CTGAGCACGTGCGGGGCCTGGAGCGCCGCTTCGCGCTCGGCAGCCAGGTCCAGGAAGCTTGTGGCCTCCTaGCCTGGCGTCGCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LSTCGAWSAASRSAARSRKLVAS*PGVASL
Trigger: CAGGGAGGCGACGCCAGGCCAGGAGGCCACAAGCTT...CCTGGACCTGGCTGCCGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCTCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR TCA 90 bp GGGCTGGACAGCCCCTGCTCACAGTGCTGTTCCCTAGAGTCCAGGGTGGGCGTCGGCTGCGCGGCTGGCTaGGCACGTGCGGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GLDSPCSQCCSLESRVGVGCAAG*ARAGPG
Trigger: TCCAGGCCCCGCACGTGCTCAGCCAGCCGCGCAGCC...GACGCCCACCCTGGACTCTAGGGAACAGCACTGTGAGCAGGGGCTGTCCAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp CGGCTGGCTGAGCACGTGCGGGGCCTGGAGCGCCGCTTCGCGCTCGGCAGCCAGGGCAGAAGAATGGCGTaGATCCAGGAGGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RLAEHVRGLERRFALGSQGRRMA*IQEAEA
Trigger: AGCCTCCGCCTCCTGGATTCACGCCATTCTTCTGCC...CTGGCTGCCGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCTCAGCCAGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561302.5
CDS-3UTR GCA 90 bp CGTGGCTTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCGCCGTCTCTCCTGCTGCGCCAGGTaGGCGCGCAGCTGCCGGATC +
Preference number: 4 (lower is better)
Translates to: RGFLRGLQLLHDALGRRLSCCAR*ARSCRI
Trigger: GATCCGGCAGCTGCGCGCGCACCTGGCGCAGCAGGA...GAGACGGCGGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGCCACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp CGTGGCTTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCGCCGTCTCAGGTCCAGGTCCTGCTaGGCCAGGTGCGCGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RGFLRGLQLLHDALGRRLRSRSC*ARCARS
Trigger: GCTGCGCGCGCACCTGGCGCAGCAGGACCTGGACCT...GAGACGGCGGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGCCACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp GAGACTCCATCCTGTGTTCCAGCTCGGGGCTGGTTTGGGCCGAGCCCGCTGGGCGGCTGGCTGAGCACGTaGGGGGCCTGGAGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: ETPSCVPARGWFGPSPLGGWLST*GAWSAA
Trigger: AGCGGCGCTCCAGGCCCCGCACGTGCTCAGCCAGCC...GCCCAGCGGGCTCGGCCCAAACCAGCCCCGAGCTGGAACACAGGATGGAGTCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561302.5
CDS-3UTR GCA 90 bp GAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCGCCGTCTCCTCGTCCCACGTGCCAGGAGGCGGAGGCTaGAGTGAGCCGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: EGCSSSTTLSAAVSSSHVPGGGG*SEPRSR
Trigger: GCGCGATCTCGGCTCACTGCAGCCTCCGCCTCCTGG...CACGTGGGACGAGGAGACGGCGGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561302.5
CDS-3UTR CCA 90 bp TGTGTTCCAGCTCGGGGCTGGTTTGGGCCGAGCCCGCTGGGCTGGGCCGGGCGAGCTGCGAGCCCGCCGTaGAGAGATCGACAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: CVPARGWFGPSPLGWAGRAASPP*RDRQQP
Trigger: TGGCTGCTGTCGATCTCTCCACGGCGGGCTCGCAGC...TCGCCCGGCCCAGCCCAGCGGGCTCGGCCCAAACCAGCCCCGAGCTGGAACACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp CTGGCTGAGCACGTGCGGGGCCTGGAGCGCCGCTTCGCGCTCGGCAGCCAGGTCAGGCACTCTCCGAGGTaGCGCTGGTGCCATTACCGC +
Preference number: 4 (lower is better)
Translates to: LAEHVRGLERRFALGSQVRHSPR*RWCHYR
Trigger: GCGGTAATGGCACCAGCGCCACCTCGGAGAGTGCCT...GACCTGGCTGCCGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCTCAGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
3UTR CAA 72 bp GCCGTCTCCTCGTCCCACGTGCCGGCCTCCAACACTTaGAAGCGGCTGCGCGGCTGGCTGAGCACGTGCGGG +
Preference number: 4 (lower is better)
Translates to: AVSSSHVPASNT*KRLRGWLSTCG
Trigger: CCCGCACGTGCTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGGCACGTGGGACGAGGAGACGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR TCA 90 bp AGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGAGCACCACCCTCCCCTaGGCAGGGCGAGAAGAGGCG +
Preference number: 4 (lower is better)
Translates to: SHEHHPPLSRARRGASSGSTTLP*AGREEA
Trigger: CGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCT...CCCAGAGCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp CTCGTCCCACGTGCCGGCCTCCAACACTTTGAAGCGGCTGCGCGGCTGGCTGAGTCCTGCTGCGCCAGGTaGGCGCGCAGCTGCCGGATC +
Preference number: 4 (lower is better)
Translates to: LVPRAGLQHFEAAARLAESCCAR*ARSCRI
Trigger: GATCCGGCAGCTGCGCGCGCACCTGGCGCAGCAGGA...CTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGGCACGTGGGACGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp GGGCTGGACAGCCCCTGCTCACAGTGCTGTTCCCTAGAGTCCAGGGTGGGCGTCGCCAGGTCCAGGTCCTaGTGCGCCAGGTGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: GLDSPCSQCCSLESRVGVARSRS*CARCAR
Trigger: GCGCGCGCACCTGGCGCAGCAGGACCTGGACCTGGC...GACGCCCACCCTGGACTCTAGGGAACAGCACTGTGAGCAGGGGCTGTCCAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp ACGCTCTCGGCCGCCGTCTCCTCGTCCCACGTGCCGGCCTCCAACACTTTGAAGGGCTGGCTGAGCACGTaGGGGGCCTGGAGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: TLSAAVSSSHVPASNTLKGWLST*GAWSAA
Trigger: AGCGGCGCTCCAGGCCCCGCACGTGCTCAGCCAGCC...CTTCAAAGTGTTGGAGGCCGGCACGTGGGACGAGGAGACGGCGGCCGAGAGCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp CCACCTGCTGCTGGGATGGCAGCGGCGGGGGAGAAGGGCCGGGCTCAGAGGACGCCGAGATCGCGCCACTaGAGTCCAGCCAGGGTGACA +
Preference number: 4 (lower is better)
Translates to: PPAAGMAAAGEKGRAQRTPRSRH*SPARVT
Trigger: TGTCACCCTGGCTGGACTGCAGTGGCGCGATCTCGG...CGTCCTCTGAGCCCGGCCCTTCTCCCCCGCCGCTGCCATCCCAGCAGCAGGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561302.5
CDS-3UTR CCA 90 bp CGGCTGGCTGAGCACGTGCGGGGCCTGGAGCGCCGCTTCGCGCTCGGCAGCCAGGACCATACACACAGCTaGCTCTGGGACACCGCTGTC +
Preference number: 4 (lower is better)
Translates to: RLAEHVRGLERRFALGSQDHTHS*LWDTAV
Trigger: GACAGCGGTGTCCCAGAGCCAGCTGTGTGTATGGTC...CTGGCTGCCGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCTCAGCCAGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp CGTGGCTTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCGCCGTCTCTCCTCCACCTGCTGCTaGGATGGCAGCGGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: RGFLRGLQLLHDALGRRLSSTCC*DGSGGG
Trigger: TCCCCCGCCGCTGCCATCCCAGCAGCAGGTGGAGGA...GAGACGGCGGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGCCACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp CGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCCTGGCCTGGCGTCGCGGCCAGGTGGGCTCCTaGGCCCCGCGTGTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: RQLWALRSEACGLLAWRRGQVGS*APRVAL
Trigger: AAGGGCCACACGCGGGGCCCAGGAGCCCACCTGGCC...GCGACGCCAGGCCAGGAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp TCCCAGGGGCTCCTGGGTCCATTGGCCACAGTGGATGCCACCATCGGAGCCAAAGGCTGCGCGGCTGGCTaGGCACGTGCGGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SQGLLGPLATVDATIGAKGCAAG*ARAGPG
Trigger: TCCAGGCCCCGCACGTGCTCAGCCAGCCGCGCAGCC...TTTGGCTCCGATGGTGGCATCCACTGTGGCCAATGGACCCAGGAGCCCCTGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR TCA 90 bp CGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCCTGGCCTGGCGTCGCCACTCTGGGCCCGGGTaGCTGAGCTGCGGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: RQLWALRSEACGLLAWRRHSGPG*LSCGRH
Trigger: GTGCCTCCCGCAGCTCAGTCACCCGGGCCCAGAGTG...GCGACGCCAGGCCAGGAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp CACGTGCCGGCCTCCAACACTTTGAAGCGGCTGCGCGGCTGGCTGAGCACGTGCGTGGCCTCCTCCACCTaGTGCTGGGATGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: HVPASNTLKRLRGWLSTCVASST*CWDGSG
Trigger: GCCGCTGCCATCCCAGCAGCAGGTGGAGGAGGCCAC...GCACGTGCTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGGCACGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp CGTGGCTTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCGCCGTCTCGCTGCGAGCCCGCCGTaGAGAGATCGACAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RGFLRGLQLLHDALGRRLAASPP*RDRQQP
Trigger: TGGCTGCTGTCGATCTCTCCACGGCGGGCTCGCAGC...GAGACGGCGGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGCCACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp AGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGGAGGAGCCCAGCGTCTaGCTGCTGTCACTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SHEHHPPLSRARRGASSGEEPSV*LLSLWA
Trigger: GGCCCAGAGTGACAGCAGCCAGACGCTGGGCTCCTC...CCCAGAGCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp CGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCCTGGCCTGGCGTCGCAGCTCGGGGCTGGTTTaGGCCGAGCCCGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RQLWALRSEACGLLAWRRSSGLV*AEPAGL
Trigger: CAGCCCAGCGGGCTCGGCCCAAACCAGCCCCGAGCT...GCGACGCCAGGCCAGGAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp CCACCTGCTGCTGGGATGGCAGCGGCGGGGGAGAAGGGCCGGGCTCAGAGGACGATCTTCGTCCAGATTTaGCAGGAGCTGCGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: PPAAGMAAAGEKGRAQRTIFVQI*QELRAR
Trigger: GCGGGCTCGCAGCTCCTGTCAAATCTGGACGAAGAT...CGTCCTCTGAGCCCGGCCCTTCTCCCCCGCCGCTGCCATCCCAGCAGCAGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR TCA 90 bp GGCGCTGGTGCCATTACCGCCGAGTTTGAGGGGCATGTCCAGAGAGAAGAGGTCGGCTGCGCGGCTGGCTaGGCACGTGCGGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GAGAITAEFEGHVQREEVGCAAG*ARAGPG
Trigger: TCCAGGCCCCGCACGTGCTCAGCCAGCCGCGCAGCC...GACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGTAATGGCACCAGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR TCA 90 bp TCCTTCATCGTGGCTTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCCACTCTGGGCCCGGGTaGCTGAGCTGCGGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: SFIVASCEGCSSSTTLSAHSGPG*LSCGRH
Trigger: GTGCCTCCCGCAGCTCAGTCACCCGGGCCCAGAGTG...GGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGCCACGATGAAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp CTGGCTGAGCACGTGCGGGGCCTGGAGCGCCGCTTCGCGCTCGGCAGCCAGGTCGTCAGCCTCTCCAGCTaGTCGTCTTGGATGACCTTG +
Preference number: 4 (lower is better)
Translates to: LAEHVRGLERRFALGSQVVSLSS*SSWMTL
Trigger: CAAGGTCATCCAAGACGAGCAGCTGGAGAGGCTGAC...GACCTGGCTGCCGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCTCAGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp GGGATGGCAGCGGCGGGGGAGAAGGGCCGGGCTCAGAGGACGGCTCCTCGCGGGATGGTTGAGGCCACGTaGAATCCCAGCACTTTGGGA +
Preference number: 4 (lower is better)
Translates to: GMAAAGEKGRAQRTAPRGMVEAT*NPSTLG
Trigger: TCCCAAAGTGCTGGGATTGCACGTGGCCTCAACCAT...CCCGCGAGGAGCCGTCCTCTGAGCCCGGCCCTTCTCCCCCGCCGCTGCCATCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561302.5
CDS-3UTR CCA 90 bp CTGGCTGAGCACGTGCGGGGCCTGGAGCGCCGCTTCGCGCTCGGCAGCCAGGTCTGTCGTCCTTCATCGTaGCTTCTTGCGAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LAEHVRGLERRFALGSQVCRPSS*LLARAA
Trigger: TGCAGCCCTCGCAAGAAGCCACGATGAAGGACGACA...GACCTGGCTGCCGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCTCAGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp GAGACTCCATCCTGTGTTCCAGCTCGGGGCTGGTTTGGGCCGAGCCCGCTGGGCGAGGAGCCCAGCGTCTaGCTGCTGTCACTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ETPSCVPARGWFGPSPLGEEPSV*LLSLWA
Trigger: GGCCCAGAGTGACAGCAGCCAGACGCTGGGCTCCTC...GCCCAGCGGGCTCGGCCCAAACCAGCCCCGAGCTGGAACACAGGATGGAGTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561302.5
CDS-3UTR CCA 90 bp ACGCTCTCGGCCGCCGTCTCCTCGTCCCACGTGCCGGCCTCCAACACTTTGAAGCACCTGCTGCTGGGATaGCAGCGGCGGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: TLSAAVSSSHVPASNTLKHLLLG*QRRGRR
Trigger: CCTTCTCCCCCGCCGCTGCCATCCCAGCAGCAGGTG...CTTCAAAGTGTTGGAGGCCGGCACGTGGGACGAGGAGACGGCGGCCGAGAGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR TCA 90 bp CCACCTGCTGCTGGGATGGCAGCGGCGGGGGAGAAGGGCCGGGCTCAGAGGACGCATTACCGCCGAGTTTaGGGGGCATGTCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: PPAAGMAAAGEKGRAQRTHYRRV*GACPER
Trigger: TCTCTCTGGACATGCCCCTCAAACTCGGCGGTAATG...CGTCCTCTGAGCCCGGCCCTTCTCCCCCGCCGCTGCCATCCCAGCAGCAGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR TCA 90 bp CAGAGGACGGCTCCTCGCGGGCAGTGCTGCAGTCCATGGAGGAGCCCAGCGTCTCACACTCTACCCTGCTaGAGCTGGGCCACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: QRTAPRGQCCSPWRSPASHTLPC*SWATGW
Trigger: CCAGCCTGTGGCCCAGCTTCAGCAGGGTAGAGTGTG...AGACGCTGGGCTCCTCCATGGACTGCAGCACTGCCCGCGAGGAGCCGTCCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR GCA 90 bp CAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCAGGTCCAGGTCCTGCTaGGCCAGGTGCGCGCGCAGC +
Preference number: 4 (lower is better)
Translates to: QGEKRRQLWALRSEACGLRSRSC*ARCARS
Trigger: GCTGCGCGCGCACCTGGCGCAGCAGGACCTGGACCT...GAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp CGTCCTTCATCGTGGCTTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGGTGGCCTCCTCCACCTaGTGCTGGGATGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: RPSSWLLARAAAPPRRSRVASST*CWDGSG
Trigger: GCCGCTGCCATCCCAGCAGCAGGTGGAGGAGGCCAC...CCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGCCACGATGAAGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp AACACTTTGAAGCGGCTGCGCGGCTGGCTGAGCACGTGCGGGGCCTGGAGCGCCGGGCTGGACAGCCCCTaGTCACAGTGCTGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: NTLKRLRGWLSTCGAWSAGLDSP*SQCCSL
Trigger: TAGGGAACAGCACTGTGAGCAGGGGCTGTCCAGCCC...GGCGCTCCAGGCCCCGCACGTGCTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR GCA 90 bp TGTGTTCCAGCTCGGGGCTGGTTTGGGCCGAGCCCGCTGGGCTGGGCCGGGCGAAAATGGTTGTTCCCCTaGCCTCTAGGACCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: CVPARGWFGPSPLGWAGRKWLFP*PLGPSH
Trigger: GTGGGAGGGTCCTAGAGGGCAGGGGAACAACCATTT...TCGCCCGGCCCAGCCCAGCGGGCTCGGCCCAAACCAGCCCCGAGCTGGAACACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR CCA 90 bp CATCCTGTGTTCCAGCTCGGGGCTGGTTTGGGCCGAGCCCGCTGGGCTGGGCCGGTCCATTGGCCACAGTaGATGCCACCATCGGAGCCA +
Preference number: 4 (lower is better)
Translates to: HPVFQLGAGLGRARWAGPVHWPQ*MPPSEP
Trigger: TGGCTCCGATGGTGGCATCCACTGTGGCCAATGGAC...CGGCCCAGCCCAGCGGGCTCGGCCCAAACCAGCCCCGAGCTGGAACACAGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561302.5
CDS-3UTR CCA 90 bp CGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCCTGGCCTGGCGTCGCCGTCCCAGGGGCTCCTaGGTCCATTGGCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: RQLWALRSEACGLLAWRRRPRGS*VHWPQW
Trigger: CCACTGTGGCCAATGGACCCAGGAGCCCCTGGGACG...GCGACGCCAGGCCAGGAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp GAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCGCCGTCTCCTCGTCCCACGTGACACACAGCTGGCTCTaGGACACCGCTGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: EGCSSSTTLSAAVSSSHVTHSWL*DTAVTA
Trigger: AGCAGTGACAGCGGTGTCCCAGAGCCAGCTGTGTGT...CACGTGGGACGAGGAGACGGCGGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp AAACCCAGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCAGGCACTCTCCGAGGTaGCGCTGGTGCCATTACCGC +
Preference number: 4 (lower is better)
Translates to: KPSHEHHPPLSRARRGASRHSPR*RWCHYR
Trigger: GCGGTAATGGCACCAGCGCCACCTCGGAGAGTGCCT...GCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCTGGGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp CAGAGGACGGCTCCTCGCGGGCAGTGCTGCAGTCCATGGAGGAGCCCAGCGTCTTGGCTGCTGTCACTCTaGGCCCGGGTGACTGAGCTG +
Preference number: 4 (lower is better)
Translates to: QRTAPRGQCCSPWRSPASWLLSL*ARVTEL
Trigger: CAGCTCAGTCACCCGGGCCCAGAGTGACAGCAGCCA...AGACGCTGGGCTCCTCCATGGACTGCAGCACTGCCCGCGAGGAGCCGTCCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp CGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCCTGGCCTGGCGTCGCGGGTCCAAGGCCTTCTaGGAAGGGCAGGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RQLWALRSEACGLLAWRRGSKAF*EGQGSS
Trigger: GGAGGACCCCTGCCCTTCCCAGAAGGCCTTGGACCC...GCGACGCCAGGCCAGGAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp TTCCCTAGAGTCCAGGGTGGGCGTCAGGAACGAAGGCAACGCAAGAGGCTGAGCCTGAGGGAGGCCAGGTaGGCTCCTGGGCCCCGCGTG +
Preference number: 4 (lower is better)
Translates to: FPRVQGGRQERRQRKRLSLREAR*APGPRV
Trigger: CACGCGGGGCCCAGGAGCCCACCTGGCCTCCCTCAG...GCTCAGCCTCTTGCGTTGCCTTCGTTCCTGACGCCCACCCTGGACTCTAGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp AGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGGGGGCTCAGCTGTCCTaGAGCCTGCTGTCAGCATTT +
Preference number: 4 (lower is better)
Translates to: SHEHHPPLSRARRGASSGGAQLS*SLLSAF
Trigger: AAATGCTGACAGCAGGCTTCAGGACAGCTGAGCCCC...CCCAGAGCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCT
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp AACACTTTGAAGCGGCTGCGCGGCTGGCTGAGCACGTGCGGGGCCTGGAGCGCCGGGGCTCAGCTGTCCTaGAGCCTGCTGTCAGCATTT +
Preference number: 4 (lower is better)
Translates to: NTLKRLRGWLSTCGAWSAGAQLS*SLLSAF
Trigger: AAATGCTGACAGCAGGCTTCAGGACAGCTGAGCCCC...GGCGCTCCAGGCCCCGCACGTGCTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR TCA 90 bp AACACTTTGAAGCGGCTGCGCGGCTGGCTGAGCACGTGCGGGGCCTGGAGCGCCATCTTCGTCCAGATTTaGCAGGAGCTGCGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: NTLKRLRGWLSTCGAWSAIFVQI*QELRAR
Trigger: GCGGGCTCGCAGCTCCTGTCAAATCTGGACGAAGAT...GGCGCTCCAGGCCCCGCACGTGCTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR TCA 90 bp CTGAGCACGTGCGGGGCCTGGAGCGCCGCTTCGCGCTCGGCAGCCAGGTCCAGGGAGCCAAAGATAGGATaGTCACAGCCCCGTCAAACA +
Preference number: 4 (lower is better)
Translates to: LSTCGAWSAASRSAARSREPKIG*SQPRQT
Trigger: TGTTTGACGGGGCTGTGATCATCCTATCTTTGGCTC...CCTGGACCTGGCTGCCGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp GAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCGTGGCCTCCTCCACCTaGTGCTGGGATGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: EQGEKRRQLWALRSEACGVASST*CWDGSG
Trigger: GCCGCTGCCATCCCAGCAGCAGGTGGAGGAGGCCAC...GCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp CGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCGCCGTCTCCTCGTCCCACGTTCCAGCTGCTCGTCTTaGATGACCTTGGCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: RGLQLLHDALGRRLLVPRSSCSS*MTLAFS
Trigger: CGAGAAGGCCAAGGTCATCCAAGACGAGCAGCTGGA...ACGTGGGACGAGGAGACGGCGGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp GAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCGCCGTCTCCTCGTCCCACGTGTGTCGTCCTTCATCGTaGCTTCTTGCGAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: EGCSSSTTLSAAVSSSHVCRPSS*LLARAA
Trigger: TGCAGCCCTCGCAAGAAGCCACGATGAAGGACGACA...CACGTGGGACGAGGAGACGGCGGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp AGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGGACCATACACACAGCTaGCTCTGGGACACCGCTGTC +
Preference number: 4 (lower is better)
Translates to: SHEHHPPLSRARRGASSGDHTHS*LWDTAV
Trigger: GACAGCGGTGTCCCAGAGCCAGCTGTGTGTATGGTC...CCCAGAGCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp GAGACTCCATCCTGTGTTCCAGCTCGGGGCTGGTTTGGGCCGAGCCCGCTGGGCTCTCCGAGGTGGCGCTaGTGCCATTACCGCCGAGTT +
Preference number: 4 (lower is better)
Translates to: ETPSCVPARGWFGPSPLGSPRWR*CHYRRV
Trigger: AACTCGGCGGTAATGGCACCAGCGCCACCTCGGAGA...GCCCAGCGGGCTCGGCCCAAACCAGCCCCGAGCTGGAACACAGGATGGAGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561302.5
CDS-3UTR CCA 90 bp GGCACTCTCCGAGGTGGCGCTGGTGCCATTACCGCCGAGTTTGAGGGGCATGTCGAGGAGCCCAGCGTCTaGCTGCTGTCACTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GTLRGGAGAITAEFEGHVEEPSV*LLSLWA
Trigger: GGCCCAGAGTGACAGCAGCCAGACGCTGGGCTCCTC...GACATGCCCCTCAAACTCGGCGGTAATGGCACCAGCGCCACCTCGGAGAGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp CGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCCTGGCCTGGCGTCGCCAGTGCTGCAGTCCATaGAGGAGCCCAGCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: RQLWALRSEACGLLAWRRQCCSP*RSPASG
Trigger: GCCAGACGCTGGGCTCCTCCATGGACTGCAGCACTG...GCGACGCCAGGCCAGGAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp CAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCTCCTCCACCTGCTGCTaGGATGGCAGCGGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: QGEKRRQLWALRSEACGLSSTCC*DGSGGG
Trigger: TCCCCCGCCGCTGCCATCCCAGCAGCAGGTGGAGGA...GAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp TCCCAGGGGCTCCTGGGTCCATTGGCCACAGTGGATGCCACCATCGGAGCCAAATCCTCCACCTGCTGCTaGGATGGCAGCGGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: SQGLLGPLATVDATIGAKSSTCC*DGSGGG
Trigger: TCCCCCGCCGCTGCCATCCCAGCAGCAGGTGGAGGA...TTTGGCTCCGATGGTGGCATCCACTGTGGCCAATGGACCCAGGAGCCCCTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp CTGGTTGAACAGACTTACCCTGTGTTCCAGCTCGGGGCTGGTTTGGGCCGAGCCAGCTCGGGGCTGGTTTaGGCCGAGCCCGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LVEQTYPVFQLGAGLGRASSGLV*AEPAGL
Trigger: CAGCCCAGCGGGCTCGGCCCAAACCAGCCCCGAGCT...GGCTCGGCCCAAACCAGCCCCGAGCTGGAACACAGGGTAAGTCTGTTCAACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR CAA 72 bp CCTGAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTaGAGGTCTGAAGCTTGTGGCCTCCTGGCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: PEQGEKRRQLWA*RSEACGLLAWR
Trigger: ACGCCAGGCCAGGAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTGCTCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp AAACCCAGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCATCTTCGTCCAGATTTaGCAGGAGCTGCGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: KPSHEHHPPLSRARRGASIFVQI*QELRAR
Trigger: GCGGGCTCGCAGCTCCTGTCAAATCTGGACGAAGAT...GCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCTGGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp AAACCCAGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCCTATTGCGGCCGTGGTaGCCATACACACAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: KPSHEHHPPLSRARRGASLLRPW*PYTQLA
Trigger: AGCCAGCTGTGTGTATGGTCACCACGGCCGCAATAG...GCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCTGGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp GAGACTCCATCCTGTGTTCCAGCTCGGGGCTGGTTTGGGCCGAGCCCGCTGGGCCTATTGCGGCCGTGGTaGCCATACACACAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: ETPSCVPARGWFGPSPLGLLRPW*PYTQLA
Trigger: AGCCAGCTGTGTGTATGGTCACCACGGCCGCAATAG...GCCCAGCGGGCTCGGCCCAAACCAGCCCCGAGCTGGAACACAGGATGGAGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561302.5
CDS-3UTR TCA 90 bp GGGCTGGACAGCCCCTGCTCACAGTGCTGTTCCCTAGAGTCCAGGGTGGGCGTCCTGGGCTTTGAGGTCTaGAGCTTGTGGCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GLDSPCSQCCSLESRVGVLGFEV*SLWPPG
Trigger: GCCAGGAGGCCACAAGCTTCAGACCTCAAAGCCCAG...GACGCCCACCCTGGACTCTAGGGAACAGCACTGTGAGCAGGGGCTGTCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp CAGAGGACGGCTCCTCGCGGGCAGTGCTGCAGTCCATGGAGGAGCCCAGCGTCTAATATAGTGCCCTGCTaGCCGGGCTCGGGATTCGCT +
Preference number: 4 (lower is better)
Translates to: QRTAPRGQCCSPWRSPASNIVPC*PGSGFA
Trigger: AGCGAATCCCGAGCCCGGGCAGCAGGGCACTATATT...AGACGCTGGGCTCCTCCATGGACTGCAGCACTGCCCGCGAGGAGCCGTCCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp AGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGGTCAGCCTCTCCAGCTaGTCGTCTTGGATGACCTTG +
Preference number: 4 (lower is better)
Translates to: SHEHHPPLSRARRGASSGVSLSS*SSWMTL
Trigger: CAAGGTCATCCAAGACGAGCAGCTGGAGAGGCTGAC...CCCAGAGCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp AAGAAAACCCAGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCAGGTGCGCGCGCAGCTaGCGGATCTCAAACCCTTGC +
Preference number: 4 (lower is better)
Translates to: KKTQPRAPPSPEQGEKRRRCARS*RISNPC
Trigger: GCAAGGGTTTGAGATCCGGCAGCTGCGCGCGCACCT...GCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCTGGGTTTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp TGTGTTCCAGCTCGGGGCTGGTTTGGGCCGAGCCCGCTGGGCTGGGCCGGGCGACTGGTGAATGTCTATTaGGGCCGTGGTGACCATACA +
Preference number: 4 (lower is better)
Translates to: CVPARGWFGPSPLGWAGRLVNVY*GRGDHT
Trigger: TGTATGGTCACCACGGCCGCAATAGACATTCACCAG...TCGCCCGGCCCAGCCCAGCGGGCTCGGCCCAAACCAGCCCCGAGCTGGAACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp CAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCGCTCCTCGCGGGCAGTaGTGCAGTCCATGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: QGEKRRQLWALRSEACGLAPRGQ*CSPWRS
Trigger: GCTCCTCCATGGACTGCAGCACTGCCCGCGAGGAGC...GAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp CGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCCTGGCCTGGCGTCGCGGCTCCTGGGTCCATTaGCCACAGTGGATGCCACCA +
Preference number: 4 (lower is better)
Translates to: RQLWALRSEACGLLAWRRGSWVH*PQWMPP
Trigger: TGGTGGCATCCACTGTGGCCAATGGACCCAGGAGCC...GCGACGCCAGGCCAGGAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp AGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGTCCAGCTGCTCGTCTTaGATGACCTTGGCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: SHEHHPPLSRARRGASSGSSCSS*MTLAFS
Trigger: CGAGAAGGCCAAGGTCATCCAAGACGAGCAGCTGGA...CCCAGAGCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp CTGGTGAATGTCTATTGCGGCCGTGGTGACCATACACACAGCTGGCTCTGGGACAGCACGTGCGGGGCCTaGAGCGCCGCTTCGCGCTCG +
Preference number: 4 (lower is better)
Translates to: LVNVYCGRGDHTHSWLWDSTCGA*SAASRS
Trigger: CGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCT...GTCCCAGAGCCAGCTGTGTGTATGGTCACCACGGCCGCAATAGACATTCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp CCCAGGGGCTCCTGGGTCCATTGGCCACAGTGGATGCCACCATCGGAGCCAAAGCAGTGCTGCAGTCCATaGAGGAGCCCAGCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: PRGSWVHWPQWMPPSEPKQCCSP*RSPASG
Trigger: GCCAGACGCTGGGCTCCTCCATGGACTGCAGCACTG...CTTTGGCTCCGATGGTGGCATCCACTGTGGCCAATGGACCCAGGAGCCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp CAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCGGGTCCAAGGCCTTCTaGGAAGGGCAGGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: QGEKRRQLWALRSEACGLGSKAF*EGQGSS
Trigger: GGAGGACCCCTGCCCTTCCCAGAAGGCCTTGGACCC...GAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp GGCGCTGGTGCCATTACCGCCGAGTTTGAGGGGCATGTCCAGAGAGAAGAGGTCGTTCCAGCTCGGGGCTaGTTTGGGCCGAGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: GAGAITAEFEGHVQREEVVPARG*FGPSPL
Trigger: CAGCGGGCTCGGCCCAAACCAGCCCCGAGCTGGAAC...GACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGTAATGGCACCAGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp CCACCTGCTGCTGGGATGGCAGCGGCGGGGGAGAAGGGCCGGGCTCAGAGGACGAGGAGAGCTTTGAGATaGCTGTCTCCCCTCATCTCA +
Preference number: 4 (lower is better)
Translates to: PPAAGMAAAGEKGRAQRTRRALR*LSPLIS
Trigger: TGAGATGAGGGGAGACAGCCATCTCAAAGCTCTCCT...CGTCCTCTGAGCCCGGCCCTTCTCCCCCGCCGCTGCCATCCCAGCAGCAGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR CCA 90 bp ACCGCCGAGTTTGAGGGGCATGTCCAGAGAGAAGAGGTCCGAGGAGATGTTGGGCCCGCGTGTGGCCCTTaGCAGCCTCCAGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: TAEFEGHVQREEVRGDVGPACGP*QPPGSQ
Trigger: CTGGGACCCTGGAGGCTGCCAAGGGCCACACGCGGG...CCCAACATCTCCTCGGACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR CCA 90 bp GTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGCTGAGGGAGGCCAGGTaGGCTCCTGGGCCCCGCGTG +
Preference number: 4 (lower is better)
Translates to: VIVLDSTQDSWERRLRGGLREAR*APGPRV
Trigger: CACGCGGGGCCCAGGAGCCCACCTGGCCTCCCTCAG...CCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp ACGCTCTCGGCCGCCGTCTCCTCGTCCCACGTGCCGGCCTCCAACACTTTGAAGGGGGCTCAGCTGTCCTaGAGCCTGCTGTCAGCATTT +
Preference number: 4 (lower is better)
Translates to: TLSAAVSSSHVPASNTLKGAQLS*SLLSAF
Trigger: AAATGCTGACAGCAGGCTTCAGGACAGCTGAGCCCC...CTTCAAAGTGTTGGAGGCCGGCACGTGGGACGAGGAGACGGCGGCCGAGAGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR TCA 90 bp AAACCCAGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCACCAGGCTGATCCAGTaGATCACGCCAGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: KPSHEHHPPLSRARRGASTRLIQ*ITPANW
Trigger: CCAGTTTGCTGGCGTGATTCACTGGATCAGCCTGGT...GCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCTGGGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp CGTCTCCTCGTCCCACGTGCCGGCCTCCAACACTTTGAAGCGGCTGCGCGGCTGACCAGGCTGATCCAGTaGATCACGCCAGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: RLLVPRAGLQHFEAAARLTRLIQ*ITPANW
Trigger: CCAGTTTGCTGGCGTGATTCACTGGATCAGCCTGGT...CAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGGCACGTGGGACGAGGAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR TCA 90 bp AAACCCAGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCGGACGTAGGCATCAATaGCCCTCTTCACCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: KPSHEHHPPLSRARRGASGRRHQ*PSSPSR
Trigger: TCTGGAGGGTGAAGAGGGTCATTGATGCCTACGTCC...GCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCTGGGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp CACGTGCCGGCCTCCAACACTTTGAAGCGGCTGCGCGGCTGGCTGAGCACGTGCGGACGTAGGCATCAATaGCCCTCTTCACCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: HVPASNTLKRLRGWLSTCGRRHQ*PSSPSR
Trigger: TCTGGAGGGTGAAGAGGGTCATTGATGCCTACGTCC...GCACGTGCTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGGCACGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR TCA 90 bp AAACCCAGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCTCAAACCCTTGCTCCTaGCAGATCTGCGTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: KPSHEHHPPLSRARRGASSNPCS*QICVSL
Trigger: GAGGCTGACGCAGATCTGTCAGGAGCAAGGGTTTGA...GCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCTGGGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp ACCGCCGAGTTTGAGGGGCATGTCCAGAGAGAAGAGGTCCGAGGAGATGTTGGGCGGCCTCCAACACTTTaGAGCGGCTGCGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TAEFEGHVQREEVRGDVGRPPTL*SGCAAG
Trigger: GCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCG...CCCAACATCTCCTCGGACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR TCA 90 bp CGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCCTGGCCTGGCGTCGCCTATTGCGGCCGTGGTaGCCATACACACAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RQLWALRSEACGLLAWRRLLRPW*PYTQLA
Trigger: AGCCAGCTGTGTGTATGGTCACCACGGCCGCAATAG...GCGACGCCAGGCCAGGAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp AAACCCAGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCCATTACCGCCGAGTTTaGGGGGCATGTCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: KPSHEHHPPLSRARRGASHYRRV*GACPER
Trigger: TCTCTCTGGACATGCCCCTCAAACTCGGCGGTAATG...GCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCTGGGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp CGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCCTGGCCTGGCGTCGCGTCCCAGGAGAGCTTTaGGATGGCTGTCTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: RQLWALRSEACGLLAWRRVPGEL*DGCLPS
Trigger: TGAGGGGAGACAGCCATCTCAAAGCTCTCCTGGGAC...GCGACGCCAGGCCAGGAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp CTCCAGATCCGGAGCATGATGATGAGGCTGATGGCGTCCCAGGGGCTCCTGGGTGGCGGGCAGATCACCTaGGGTCAGGAGATCGAGACC +
Preference number: 4 (lower is better)
Translates to: LQIRSMMMRLMASQGLLGGGQIT*GQEIET
Trigger: GGTCTCGATCTCCTGACCTCAGGTGATCTGCCCGCC...ACCCAGGAGCCCCTGGGACGCCATCAGCCTCATCATCATGCTCCGGATCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561302.5
CDS-3UTR GCA 90 bp CGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCGCCGTCTCCTCGTCCCACGTGCAAAGTTCACCAGCTaGACAGGAGCAATGCTCTTG +
Preference number: 4 (lower is better)
Translates to: RGLQLLHDALGRRLLVPRAKFTS*TGAMLL
Trigger: CAAGAGCATTGCTCCTGTGCAGCTGGTGAACTTTGC...ACGTGGGACGAGGAGACGGCGGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp GTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGTCCTGCTGCGCCAGGTaGGCGCGCAGCTGCCGGATC +
Preference number: 4 (lower is better)
Translates to: VIVLDSTQDSWERRLRGGSCCAR*ARSCRI
Trigger: GATCCGGCAGCTGCGCGCGCACCTGGCGCAGCAGGA...CCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp CTCCAGATCCGGAGCATGATGATGAGGCTGATGGCGTCCCAGGGGCTCCTGGGTGCTTCTTGCGAGGGCTaGAGCTCCTCCACGACGCTC +
Preference number: 4 (lower is better)
Translates to: LQIRSMMMRLMASQGLLGASCEG*SSSTTL
Trigger: GAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGC...ACCCAGGAGCCCCTGGGACGCCATCAGCCTCATCATCATGCTCCGGATCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp GTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGGCCTCCTCCACCTGCTaGTGGGATGGCAGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: VIVLDSTQDSWERRLRGGASSTC*WDGSGG
Trigger: CCCGCCGCTGCCATCCCAGCAGCAGGTGGAGGAGGC...CCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp GGCACTCTCCGAGGTGGCGCTGGTGCCATTACCGCCGAGTTTGAGGGGCATGTCGGCTCCTGGGTCCATTaGCCACAGTGGATGCCACCA +
Preference number: 4 (lower is better)
Translates to: GTLRGGAGAITAEFEGHVGSWVH*PQWMPP
Trigger: TGGTGGCATCCACTGTGGCCAATGGACCCAGGAGCC...GACATGCCCCTCAAACTCGGCGGTAATGGCACCAGCGCCACCTCGGAGAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp GGGCTGGACAGCCCCTGCTCACAGTGCTGTTCCCTAGAGTCCAGGGTGGGCGTCACACACAGCTGGCTCTaGGACACCGCTGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: GLDSPCSQCCSLESRVGVTHSWL*DTAVTA
Trigger: AGCAGTGACAGCGGTGTCCCAGAGCCAGCTGTGTGT...GACGCCCACCCTGGACTCTAGGGAACAGCACTGTGAGCAGGGGCTGTCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp GAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCGCCGTCTCCTCGTCCCACGTGCCCTCCTGGTTCTTCTaGTTGAACAGACTTACCCTG +
Preference number: 4 (lower is better)
Translates to: EGCSSSTTLSAAVSSSHVPSWFF*LNRLTL
Trigger: CAGGGTAAGTCTGTTCAACCAGAAGAACCAGGAGGG...CACGTGGGACGAGGAGACGGCGGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR CCA 90 bp GGTGGTCTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCCCGCGTGTGGCCCTTaGCAGCCTCCAGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GGLRVIVLDSTQDSWERRPACGP*QPPGSQ
Trigger: CTGGGACCCTGGAGGCTGCCAAGGGCCACACGCGGG...CCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCACACGGAGACCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp TGGCAGGACGTAGGCATCAATGACCCTCTTCACCCTCCAGATCCGGAGCATGATGGCCAGGTGGGCTCCTaGGCCCCGCGTGTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: WQDVGINDPLHPPDPEHDGQVGS*APRVAL
Trigger: AAGGGCCACACGCGGGGCCCAGGAGCCCACCTGGCC...ATCATGCTCCGGATCTGGAGGGTGAAGAGGGTCATTGATGCCTACGTCCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR TCA 90 bp ACGCTCTCGGCCGCCGTCTCCTCGTCCCACGTGCCGGCCTCCAACACTTTGAAGGCTGCTCGTCTTGGATaGCCTTGGCCTTCTCGTACT +
Preference number: 4 (lower is better)
Translates to: TLSAAVSSSHVPASNTLKAARLG*PWPSRT
Trigger: AGTACGAGAAGGCCAAGGTCATCCAAGACGAGCAGC...CTTCAAAGTGTTGGAGGCCGGCACGTGGGACGAGGAGACGGCGGCCGAGAGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR TCA 90 bp GGGCTGGACAGCCCCTGCTCACAGTGCTGTTCCCTAGAGTCCAGGGTGGGCGTCTCAAACCCTTGCTCCTaGCAGATCTGCGTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GLDSPCSQCCSLESRVGVSNPCS*QICVSL
Trigger: GAGGCTGACGCAGATCTGTCAGGAGCAAGGGTTTGA...GACGCCCACCCTGGACTCTAGGGAACAGCACTGTGAGCAGGGGCTGTCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp ACGCTCTCGGCCGCCGTCTCCTCGTCCCACGTGCCGGCCTCCAACACTTTGAAGCATTACCGCCGAGTTTaGGGGGCATGTCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: TLSAAVSSSHVPASNTLKHYRRV*GACPER
Trigger: TCTCTCTGGACATGCCCCTCAAACTCGGCGGTAATG...CTTCAAAGTGTTGGAGGCCGGCACGTGGGACGAGGAGACGGCGGCCGAGAGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR TCA 90 bp CTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGCTGGGCCCGGGTGACTaGGCTGCGGGAGGCACTCTC +
Preference number: 4 (lower is better)
Translates to: LRVIVLDSTQDSWERRLRLGPGD*AAGGTL
Trigger: GAGAGTGCCTCCCGCAGCTCAGTCACCCGGGCCCAG...CCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCACACGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp CAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCCTGGGCTTTGAGGTCTaGAGCTTGTGGCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QGEKRRQLWALRSEACGLLGFEV*SLWPPG
Trigger: GCCAGGAGGCCACAAGCTTCAGACCTCAAAGCCCAG...GAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp GTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGAGCACCACCCTCCCCTaGGCAGGGCGAGAAGAGGCG +
Preference number: 4 (lower is better)
Translates to: VIVLDSTQDSWERRLRGGSTTLP*AGREEA
Trigger: CGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCT...CCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp TGGCAGGACGTAGGCATCAATGACCCTCTTCACCCTCCAGATCCGGAGCATGATAGGTCCAGGTCCTGCTaGGCCAGGTGCGCGCGCAGC +
Preference number: 4 (lower is better)
Translates to: WQDVGINDPLHPPDPEHDRSRSC*ARCARS
Trigger: GCTGCGCGCGCACCTGGCGCAGCAGGACCTGGACCT...ATCATGCTCCGGATCTGGAGGGTGAAGAGGGTCATTGATGCCTACGTCCTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp CAGCTGCTCGTCTTGGATGACCTTGGCCTTCTCGTACTGCTGGATAACCATCTCGCCAGGTCCAGGTCCTaGTGCGCCAGGTGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: QLLVLDDLGLLVLLDNHLARSRS*CARCAR
Trigger: GCGCGCGCACCTGGCGCAGCAGGACCTGGACCTGGC...GAGATGGTTATCCAGCAGTACGAGAAGGCCAAGGTCATCCAAGACGAGCAGCTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp CTCGTCCCACGTGCCGGCCTCCAACACTTTGAAGCGGCTGCGCGGCTGGCTGAGGGACACCGCTGTCACTaGTGGGCCCATTGTAATACT +
Preference number: 4 (lower is better)
Translates to: LVPRAGLQHFEAAARLAEGHRCH*WAHCNT
Trigger: AGTATTACAATGGGCCCAGCAGTGACAGCGGTGTCC...CTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGGCACGTGGGACGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp GCCGGATCTCAAACCCTTGCTCCTGACAGATCTGCGTCAGCCTCTCCAGCTGCTGCTCCTCGCGGGCAGTaGTGCAGTCCATGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: AGSQTLAPDRSASASPAAAPRGQ*CSPWRS
Trigger: GCTCCTCCATGGACTGCAGCACTGCCCGCGAGGAGC...AGCAGCTGGAGAGGCTGACGCAGATCTGTCAGGAGCAAGGGTTTGAGATCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp GATGTAGCTGTTCATGTCGTCCTTCATCGTGGCTTCTTGCGAGGGCTGCAGCTCGCCTCCTCCACCTGCTaGTGGGATGGCAGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: DVAVHVVLHRGFLRGLQLASSTC*WDGSGG
Trigger: CCCGCCGCTGCCATCCCAGCAGCAGGTGGAGGAGGC...GAGCTGCAGCCCTCGCAAGAAGCCACGATGAAGGACGACATGAACAGCTACATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp AAACCCAGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCGCCTCAGGGACCCTGTaGAGCTTTTGCTCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: KPSHEHHPPLSRARRGASASGTL*SFCSLD
Trigger: ATCCAAAGAGCAAAAGCTGCACAGGGTCCCTGAGGC...GCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCTGGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp CGTGGCTTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCGCCGTCTCCATCTCCAGCTTCACTaGCAGGACGTAGGCATCAAT +
Preference number: 4 (lower is better)
Translates to: RGFLRGLQLLHDALGRRLHLQLH*QDVGIN
Trigger: ATTGATGCCTACGTCCTGCCAGTGAAGCTGGAGATG...GAGACGGCGGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp TCCCAGGGGCTCCTGGGTCCATTGGCCACAGTGGATGCCACCATCGGAGCCAAAATCTCACCCAGCCCATaGCAGGCTCTAGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SQGLLGPLATVDATIGAKISPSP*QALGLR
Trigger: CCTGAGGCCTAGAGCCTGCCATGGGCTGGGTGAGAT...TTTGGCTCCGATGGTGGCATCCACTGTGGCCAATGGACCCAGGAGCCCCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR CCA 90 bp TTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGGCTGAAGCTTGTGGCCTCCTaGCCTGGCGTCGCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LCWTPPRIPGKDGLGVGLKLVAS*PGVASL
Trigger: CAGGGAGGCGACGCCAGGCCAGGAGGCCACAAGCTT...CAGCCCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR CAA 72 bp CTCTCCGAGGTGGCGCTGGTGCCATTACCGCCGAGTTaGAGGGGCATGTCCAGAGAGAAGAGGTCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: LSEVALVPLPPS*RGMSREKRSEE
Trigger: CTCCTCGGACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGTAATGGCACCAGCGCCACCTCGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR TCA 90 bp CTGGCTGAGCACGTGCGGGGCCTGGAGCGCCGCTTCGCGCTCGGCAGCCAGGTCCTACTTGTTGGGAGATaGTCTCAACTTCAGAAATTC +
Preference number: 4 (lower is better)
Translates to: LAEHVRGLERRFALGSQVLLVGR*SQLQKF
Trigger: GAATTTCTGAAGTTGAGATCATCTCCCAACAAGTAG...GACCTGGCTGCCGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCTCAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR TCA 90 bp TCCTTCATCGTGGCTTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCACCAGGCTGATCCAGTaGATCACGCCAGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: SFIVASCEGCSSSTTLSATRLIQ*ITPANW
Trigger: CCAGTTTGCTGGCGTGATTCACTGGATCAGCCTGGT...GGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGCCACGATGAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR TCA 90 bp CGTCCTTCATCGTGGCTTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGTCAAACCCTTGCTCCTaGCAGATCTGCGTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RPSSWLLARAAAPPRRSRSNPCS*QICVSL
Trigger: GAGGCTGACGCAGATCTGTCAGGAGCAAGGGTTTGA...CCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGCCACGATGAAGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp CTCGTCCCACGTGCCGGCCTCCAACACTTTGAAGCGGCTGCGCGGCTGGCTGAGGCAAAGTTCACCAGCTaGACAGGAGCAATGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LVPRAGLQHFEAAARLAEAKFTS*TGAMLL
Trigger: CAAGAGCATTGCTCCTGTGCAGCTGGTGAACTTTGC...CTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGGCACGTGGGACGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp CAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCAGATTTGACAGGAGCTaGGAGCCCGCCGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: QGEKRRQLWALRSEACGLRFDRS*EPAVER
Trigger: TCTCTCCACGGCGGGCTCGCAGCTCCTGTCAAATCT...GAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp TGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGGCTGGACAGCAGATTTGACAGGAGCTaGGAGCCCGCCGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: WTPPRIPGKDGLGVGLDSRFDRS*EPAVER
Trigger: TCTCTCCACGGCGGGCTCGCAGCTCCTGTCAAATCT...GCTGTCCAGCCCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp CTGCGGGAGGCACTCTCCGAGGTGGCGCTGGTGCCATTACCGCCGAGTTTGAGGATTGGCCACAGTGGATaGCACCATCGGAGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LREALSEVALVPLPPSLRIGHSG*HHRSQR
Trigger: TCTTTGGCTCCGATGGTGGCATCCACTGTGGCCAAT...CCTCAAACTCGGCGGTAATGGCACCAGCGCCACCTCGGAGAGTGCCTCCCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp CTGCGGGAGGCACTCTCCGAGGTGGCGCTGGTGCCATTACCGCCGAGTTTGAGGGGACACCGCTGTCACTaGTGGGCCCATTGTAATACT +
Preference number: 4 (lower is better)
Translates to: LREALSEVALVPLPPSLRGHRCH*WAHCNT
Trigger: AGTATTACAATGGGCCCAGCAGTGACAGCGGTGTCC...CCTCAAACTCGGCGGTAATGGCACCAGCGCCACCTCGGAGAGTGCCTCCCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp CAGAGGACGGCTCCTCGCGGGCAGTGCTGCAGTCCATGGAGGAGCCCAGCGTCTAGCCATGGGTTTTCTTaGTGTTTAGTGGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: QRTAPRGQCCSPWRSPASSHGFS*CLVGLS
Trigger: GCTGAGCCCCACTAAACACCAAGAAAACCCATGGCT...AGACGCTGGGCTCCTCCATGGACTGCAGCACTGCCCGCGAGGAGCCGTCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp GCTTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCGCCGTCTCCTCGGGTCATGTTGAAAGATaGAGCCACAGCCATGGGTTT +
Preference number: 4 (lower is better)
Translates to: ASCEGCSSSTTLSAAVSSGHVER*SHSHGF
Trigger: AAACCCATGGCTGTGGCTCCATCTTTCAACATGACC...CGAGGAGACGGCGGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp CGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCGCCGTCTCCTCGTCCCACGTAAATTCCTCCTTCTATaGCAGGCTGTGGATTGGTCA +
Preference number: 4 (lower is better)
Translates to: RGLQLLHDALGRRLLVPRKFLLL*QAVDWS
Trigger: TGACCAATCCACAGCCTGCCATAGAAGGAGGAATTT...ACGTGGGACGAGGAGACGGCGGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp GAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCGACCATACACACAGCTaGCTCTGGGACACCGCTGTC +
Preference number: 4 (lower is better)
Translates to: EQGEKRRQLWALRSEACGDHTHS*LWDTAV
Trigger: GACAGCGGTGTCCCAGAGCCAGCTGTGTGTATGGTC...GCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp ATTACCGCCGAGTTTGAGGGGCATGTCCAGAGAGAAGAGGTCCGAGGAGATGTTAGCTCGGGGCTGGTTTaGGCCGAGCCCGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: ITAEFEGHVQREEVRGDVSSGLV*AEPAGL
Trigger: CAGCCCAGCGGGCTCGGCCCAAACCAGCCCCGAGCT...AACATCTCCTCGGACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGTAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp AAGAAAACCCAGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCACTTGTCCTCCAGCATaGGCACAGTGGGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: KKTQPRAPPSPEQGEKRRTCPPA*AQWAGS
Trigger: ACTTCCAGCCCACTGTGCCCATGCTGGAGGACAAGT...GCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCTGGGTTTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp CTGCGGGAGGCACTCTCCGAGGTGGCGCTGGTGCCATTACCGCCGAGTTTGAGGGAGCCAAAGATAGGATaGTCACAGCCCCGTCAAACA +
Preference number: 4 (lower is better)
Translates to: LREALSEVALVPLPPSLREPKIG*SQPRQT
Trigger: TGTTTGACGGGGCTGTGATCATCCTATCTTTGGCTC...CCTCAAACTCGGCGGTAATGGCACCAGCGCCACCTCGGAGAGTGCCTCCCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp TTCCCTAGAGTCCAGGGTGGGCGTCAGGAACGAAGGCAACGCAAGAGGCTGAGCAATATAGTGCCCTGCTaGCCGGGCTCGGGATTCGCT +
Preference number: 4 (lower is better)
Translates to: FPRVQGGRQERRQRKRLSNIVPC*PGSGFA
Trigger: AGCGAATCCCGAGCCCGGGCAGCAGGGCACTATATT...GCTCAGCCTCTTGCGTTGCCTTCGTTCCTGACGCCCACCCTGGACTCTAGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp CGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCCTGGCCTGGCGTCGCCTGGTGAATGTCTATTaGGGCCGTGGTGACCATACA +
Preference number: 4 (lower is better)
Translates to: RQLWALRSEACGLLAWRRLVNVY*GRGDHT
Trigger: TGTATGGTCACCACGGCCGCAATAGACATTCACCAG...GCGACGCCAGGCCAGGAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp AACACTTTGAAGCGGCTGCGCGGCTGGCTGAGCACGTGCGGGGCCTGGAGCGCCCAGCATTTCCAAGCGTaGGTTCTACAAGACACATAC +
Preference number: 4 (lower is better)
Translates to: NTLKRLRGWLSTCGAWSAQHFQA*VLQDTY
Trigger: GTATGTGTCTTGTAGAACCCACGCTTGGAAATGCTG...GGCGCTCCAGGCCCCGCACGTGCTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp CACGTGCCGGCCTCCAACACTTTGAAGCGGCTGCGCGGCTGGCTGAGCACGTGCGGTCATGTTGAAAGATaGAGCCACAGCCATGGGTTT +
Preference number: 4 (lower is better)
Translates to: HVPASNTLKRLRGWLSTCGHVER*SHSHGF
Trigger: AAACCCATGGCTGTGGCTCCATCTTTCAACATGACC...GCACGTGCTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGGCACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp ACCGCCGAGTTTGAGGGGCATGTCCAGAGAGAAGAGGTCCGAGGAGATGTTGGGGGCTCCTGGGTCCATTaGCCACAGTGGATGCCACCA +
Preference number: 4 (lower is better)
Translates to: TAEFEGHVQREEVRGDVGGSWVH*PQWMPP
Trigger: TGGTGGCATCCACTGTGGCCAATGGACCCAGGAGCC...CCCAACATCTCCTCGGACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp GGAGATGTTGGGCTGGTGAATGTCTATTGCGGCCGTGGTGACCATACACACAGCCGTCCCAGGGGCTCCTaGGTCCATTGGCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: GDVGLVNVYCGRGDHTHSRPRGS*VHWPQW
Trigger: CCACTGTGGCCAATGGACCCAGGAGCCCCTGGGACG...GCTGTGTGTATGGTCACCACGGCCGCAATAGACATTCACCAGCCCAACATCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp TTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGGCTGTCTCCGAGGTGGCGCTaGTGCCATTACCGCCGAGTT +
Preference number: 4 (lower is better)
Translates to: LCWTPPRIPGKDGLGVGLSPRWR*CHYRRV
Trigger: AACTCGGCGGTAATGGCACCAGCGCCACCTCGGAGA...CAGCCCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp GTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGCAGTGCTGCAGTCCATaGAGGAGCCCAGCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: VIVLDSTQDSWERRLRGGQCCSP*RSPASG
Trigger: GCCAGACGCTGGGCTCCTCCATGGACTGCAGCACTG...CCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp TGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGGCTGGACAGCTCCACCCAGGATTCCTaGGAAAGACGGCTTAGGGGT +
Preference number: 4 (lower is better)
Translates to: WTPPRIPGKDGLGVGLDSSTQDS*ERRLRG
Trigger: ACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGA...GCTGTCCAGCCCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp CAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCTCCACCCAGGATTCCTaGGAAAGACGGCTTAGGGGT +
Preference number: 4 (lower is better)
Translates to: QGEKRRQLWALRSEACGLSTQDS*ERRLRG
Trigger: ACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGA...GAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp AAACCCAGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCCATAGGCTCAGATGGTaGTCTCCGTGTGATTGTGTT +
Preference number: 4 (lower is better)
Translates to: KPSHEHHPPLSRARRGASHRLRW*SPCDCV
Trigger: AACACAATCACACGGAGACCACCATCTGAGCCTATG...GCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCTGGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp ACGCTCTCGGCCGCCGTCTCCTCGTCCCACGTGCCGGCCTCCAACACTTTGAAGGCCAAGGTTGGAAAATaGTTGTTCCCCTGCCCTCTA +
Preference number: 4 (lower is better)
Translates to: TLSAAVSSSHVPASNTLKAKVGK*LFPCPL
Trigger: TAGAGGGCAGGGGAACAACCATTTTCCAACCTTGGC...CTTCAAAGTGTTGGAGGCCGGCACGTGGGACGAGGAGACGGCGGCCGAGAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR TCA 90 bp GGCGCTGGTGCCATTACCGCCGAGTTTGAGGGGCATGTCCAGAGAGAAGAGGTCGAGATGTTGGGCTGGTaGATGTCTATTGCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: GAGAITAEFEGHVQREEVEMLGW*MSIAAV
Trigger: CACGGCCGCAATAGACATTCACCAGCCCAACATCTC...GACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGTAATGGCACCAGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR TCA 90 bp GAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCATGACAGGCCTGATCTaGAAGACAGTGAAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: EQGEKRRQLWALRSEACGMTGLI*KTVKPS
Trigger: GGAGGGCTTCACTGTCTTTCAGATCAGGCCTGTCAT...GCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp CAGCTGCTCGTCTTGGATGACCTTGGCCTTCTCGTACTGCTGGATAACCATCTCCCTCGCGGGCAGTGCTaGAGTCCATGGAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QLLVLDDLGLLVLLDNHLPRGQC*SPWRSP
Trigger: TGGGCTCCTCCATGGACTGCAGCACTGCCCGCGAGG...GAGATGGTTATCCAGCAGTACGAGAAGGCCAAGGTCATCCAAGACGAGCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp CTCGTCCCACGTGCCGGCCTCCAACACTTTGAAGCGGCTGCGCGGCTGGCTGAGACTCAGAAACGCTCATaGTGGAATGAGAATGAGGAC +
Preference number: 4 (lower is better)
Translates to: LVPRAGLQHFEAAARLAETQKRS*WNENED
Trigger: GTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGT...CTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGGCACGTGGGACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR GCA 90 bp ACCGCCGAGTTTGAGGGGCATGTCCAGAGAGAAGAGGTCCGAGGAGATGTTGGGAAACTGCCACACGGCTaGTCTCTTCCCACAGCACGG +
Preference number: 4 (lower is better)
Translates to: TAEFEGHVQREEVRGDVGKLPHG*SLPTAR
Trigger: CCGTGCTGTGGGAAGAGAGCAGCCGTGTGGCAGTTT...CCCAACATCTCCTCGGACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR CCA 90 bp CACGTGCCGGCCTCCAACACTTTGAAGCGGCTGCGCGGCTGGCTGAGCACGTGCAAATTCCTCCTTCTATaGCAGGCTGTGGATTGGTCA +
Preference number: 4 (lower is better)
Translates to: HVPASNTLKRLRGWLSTCKFLLL*QAVDWS
Trigger: TGACCAATCCACAGCCTGCCATAGAAGGAGGAATTT...GCACGTGCTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGGCACGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp GGCACTCTCCGAGGTGGCGCTGGTGCCATTACCGCCGAGTTTGAGGGGCATGTCGGTCCGAGGAGATGTTaGGCTGGTGAATGTCTATTG +
Preference number: 4 (lower is better)
Translates to: GTLRGGAGAITAEFEGHVGPRRC*AGECLL
Trigger: CAATAGACATTCACCAGCCCAACATCTCCTCGGACC...GACATGCCCCTCAAACTCGGCGGTAATGGCACCAGCGCCACCTCGGAGAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp TGGCAGGACGTAGGCATCAATGACCCTCTTCACCCTCCAGATCCGGAGCATGATTGGCTGCTGTCACTCTaGGCCCGGGTGACTGAGCTG +
Preference number: 4 (lower is better)
Translates to: WQDVGINDPLHPPDPEHDWLLSL*ARVTEL
Trigger: CAGCTCAGTCACCCGGGCCCAGAGTGACAGCAGCCA...ATCATGCTCCGGATCTGGAGGGTGAAGAGGGTCATTGATGCCTACGTCCTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp TGGCTCTGGGACACCGCTGTCACTGCTGGGCCCATTGTAATACTGACTGATGTAGGGTCCAAGGCCTTCTaGGAAGGGCAGGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: WLWDTAVTAGPIVILTDVGSKAF*EGQGSS
Trigger: GGAGGACCCCTGCCCTTCCCAGAAGGCCTTGGACCC...TACATCAGTCAGTATTACAATGGGCCCAGCAGTGACAGCGGTGTCCCAGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp ACGCTCTCGGCCGCCGTCTCCTCGTCCCACGTGCCGGCCTCCAACACTTTGAAGACAGTGAAGCCCTCCTaGTTCTTCTGGTTGAACAGA +
Preference number: 4 (lower is better)
Translates to: TLSAAVSSSHVPASNTLKTVKPS*FFWLNR
Trigger: TCTGTTCAACCAGAAGAACCAGGAGGGCTTCACTGT...CTTCAAAGTGTTGGAGGCCGGCACGTGGGACGAGGAGACGGCGGCCGAGAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR CCA 90 bp TCCTTCATCGTGGCTTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCATCACGCCAGCAAACTaGAATGCGCTGGAAACCTTC +
Preference number: 4 (lower is better)
Translates to: SFIVASCEGCSSSTTLSAITPAN*NALETF
Trigger: GAAGGTTTCCAGCGCATTCCAGTTTGCTGGCGTGAT...GGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGCCACGATGAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561302.5
CDS-3UTR TCA 90 bp TTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGGCTGGGACGTAGGCATCAATaGCCCTCTTCACCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LCWTPPRIPGKDGLGVGLGRRHQ*PSSPSR
Trigger: TCTGGAGGGTGAAGAGGGTCATTGATGCCTACGTCC...CAGCCCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp GTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGGTCCCAGGAGAGCTTTaGGATGGCTGTCTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: VIVLDSTQDSWERRLRGGVPGEL*DGCLPS
Trigger: TGAGGGGAGACAGCCATCTCAAAGCTCTCCTGGGAC...CCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp CTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGCCAGCTCTGGGCTTTaGGGTCTGAAGCTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LRVIVLDSTQDSWERRLRASSGL*GLKLVA
Trigger: GGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGC...CCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCACACGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp GAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCGCAAAGTTCACCAGCTaGACAGGAGCAATGCTCTTG +
Preference number: 4 (lower is better)
Translates to: EQGEKRRQLWALRSEACGAKFTS*TGAMLL
Trigger: CAAGAGCATTGCTCCTGTGCAGCTGGTGAACTTTGC...GCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp CTGGTGAATGTCTATTGCGGCCGTGGTGACCATACACACAGCTGGCTCTGGGACAGATTTGACAGGAGCTaGGAGCCCGCCGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LVNVYCGRGDHTHSWLWDRFDRS*EPAVER
Trigger: TCTCTCCACGGCGGGCTCGCAGCTCCTGTCAAATCT...GTCCCAGAGCCAGCTGTGTGTATGGTCACCACGGCCGCAATAGACATTCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp ATAGGCTCAGATGGTGGTCTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCGCTTCTTGCGAGGGCTaGAGCTCCTCCACGACGCTC +
Preference number: 4 (lower is better)
Translates to: IGSDGGLRVIVLDSTQDSASCEG*SSSTTL
Trigger: GAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGC...GGAATCCTGGGTGGAGTCCAACACAATCACACGGAGACCACCATCTGAGCCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp GTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGTTCATCGTGGCTTCTTaGGAGGGCTGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VIVLDSTQDSWERRLRGGFIVAS*EGCSSS
Trigger: GGAGGAGCTGCAGCCCTCGCAAGAAGCCACGATGAA...CCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp GAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTGGTGAATGTCTATTaGGGCCGTGGTGACCATACA +
Preference number: 4 (lower is better)
Translates to: EQGEKRRQLWALRSEACGLVNVY*GRGDHT
Trigger: TGTATGGTCACCACGGCCGCAATAGACATTCACCAG...GCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp AAACCCAGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCACCCTGTGCAGCTTTTaGTCTTTGGATTCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: KPSHEHHPPLSRARRGASTLCSF*SLDSKD
Trigger: ATCTTTGGAATCCAAAGAGCAAAAGCTGCACAGGGT...GCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCTGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp GTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGAGCCCCTGCTCACAGTaGTGTTCCCTAGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VIVLDSTQDSWERRLRGGSPCSQ*CSLESR
Trigger: CCTGGACTCTAGGGAACAGCACTGTGAGCAGGGGCT...CCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp CTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGGCTGGACAGCCCCTaGTCACAGTGCTGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: LRVIVLDSTQDSWERRLRGLDSP*SQCCSL
Trigger: TAGGGAACAGCACTGTGAGCAGGGGCTGTCCAGCCC...CCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCACACGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp TTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGGCTGAAATGGTTGTTCCCCTaGCCTCTAGGACCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LCWTPPRIPGKDGLGVGLKWLFP*PLGPSH
Trigger: GTGGGAGGGTCCTAGAGGGCAGGGGAACAACCATTT...CAGCCCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp TTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGGCTGGCCAGCAAACTGGAATaGGCTGGAAACTGCCACACG +
Preference number: 4 (lower is better)
Translates to: LCWTPPRIPGKDGLGVGLASKLE*AGNCHT
Trigger: CGTGTGGCAGTTTCCAGCGCATTCCAGTTTGCTGGC...CAGCCCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR CCA 90 bp CAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCCATCTCCAGCTTCACTaGCAGGACGTAGGCATCAAT +
Preference number: 4 (lower is better)
Translates to: QGEKRRQLWALRSEACGLHLQLH*QDVGIN
Trigger: ATTGATGCCTACGTCCTGCCAGTGAAGCTGGAGATG...GAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp CAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCGCCTTCTCGTACTGCTaGATAACCATCTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: QGEKRRQLWALRSEACGLAFSYC*ITISIS
Trigger: GGAGATGGAGATGGTTATCCAGCAGTACGAGAAGGC...GAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp GCCGGATCTCAAACCCTTGCTCCTGACAGATCTGCGTCAGCCTCTCCAGCTGCTCAAACTGGAATGCGCTaGAAACTGCCACACGGCTGC +
Preference number: 4 (lower is better)
Translates to: AGSQTLAPDRSASASPAAQTGMR*KLPHGC
Trigger: GCAGCCGTGTGGCAGTTTCCAGCGCATTCCAGTTTG...AGCAGCTGGAGAGGCTGACGCAGATCTGTCAGGAGCAAGGGTTTGAGATCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR TCA 90 bp GGTGGTCTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGGCTGCTCGTCTTGGATaGCCTTGGCCTTCTCGTACT +
Preference number: 4 (lower is better)
Translates to: GGLRVIVLDSTQDSWERRAARLG*PWPSRT
Trigger: AGTACGAGAAGGCCAAGGTCATCCAAGACGAGCAGC...CCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCACACGGAGACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp ACCGCCGAGTTTGAGGGGCATGTCCAGAGAGAAGAGGTCCGAGGAGATGTTGGGATGACAGGCCTGATCTaGAAGACAGTGAAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: TAEFEGHVQREEVRGDVGMTGLI*KTVKPS
Trigger: GGAGGGCTTCACTGTCTTTCAGATCAGGCCTGTCAT...CCCAACATCTCCTCGGACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR TCA 90 bp GTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGATGGTGGTCTCCGTGTaGTTGTGTTGGACTCCACCC +
Preference number: 4 (lower is better)
Translates to: VIVLDSTQDSWERRLRGGMVVSV*LCWTPP
Trigger: GGGTGGAGTCCAACACAATCACACGGAGACCACCAT...CCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp TGGCAGGACGTAGGCATCAATGACCCTCTTCACCCTCCAGATCCGGAGCATGATAATATAGTGCCCTGCTaGCCGGGCTCGGGATTCGCT +
Preference number: 4 (lower is better)
Translates to: WQDVGINDPLHPPDPEHDNIVPC*PGSGFA
Trigger: AGCGAATCCCGAGCCCGGGCAGCAGGGCACTATATT...ATCATGCTCCGGATCTGGAGGGTGAAGAGGGTCATTGATGCCTACGTCCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp TCCCAGGGGCTCCTGGGTCCATTGGCCACAGTGGATGCCACCATCGGAGCCAAAGCTGCACAGGAGCAATaGTCTTGGTTTCTTCGTCTA +
Preference number: 4 (lower is better)
Translates to: SQGLLGPLATVDATIGAKAAQEQ*SWFLRL
Trigger: TAGACGAAGAAACCAAGAGCATTGCTCCTGTGCAGC...TTTGGCTCCGATGGTGGCATCCACTGTGGCCAATGGACCCAGGAGCCCCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp GAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCTTGGCCTTCTCGTACTaGTGGATAACCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: EQGEKRRQLWALRSEACGLAFSY*WITISI
Trigger: GATGGAGATGGTTATCCAGCAGTACGAGAAGGCCAA...GCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp TCCCAGGGGCTCCTGGGTCCATTGGCCACAGTGGATGCCACCATCGGAGCCAAATTGGCCTTCTCGTACTaGTGGATAACCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: SQGLLGPLATVDATIGAKLAFSY*WITISI
Trigger: GATGGAGATGGTTATCCAGCAGTACGAGAAGGCCAA...TTTGGCTCCGATGGTGGCATCCACTGTGGCCAATGGACCCAGGAGCCCCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp CCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGCCAGGTCCAGGTCCTaGTGCGCCAGGTGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: PVKVKTRFVLKRLRNAHAARSRS*CARCAR
Trigger: GCGCGCGCACCTGGCGCAGCAGGACCTGGACCTGGC...AGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp CCACCCACCTCTAGGTTGATCCCTTTATATCCTGTGAAGGTGAAAACTAGATTCGGCTGGCTGAGCACGTaGGGGGCCTGGAGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: PPTSRLIPLYPVKVKTRFGWLST*GAWSAA
Trigger: AGCGGCGCTCCAGGCCCCGCACGTGCTCAGCCAGCC...GAATCTAGTTTTCACCTTCACAGGATATAAAGGGATCAACCTAGAGGTGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp CTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGTTCATCGTGGCTTCTTaGGAGGGCTGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LRVIVLDSTQDSWERRLRFIVAS*EGCSSS
Trigger: GGAGGAGCTGCAGCCCTCGCAAGAAGCCACGATGAA...CCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCACACGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp TGGCAGGACGTAGGCATCAATGACCCTCTTCACCCTCCAGATCCGGAGCATGATTTCATCGTGGCTTCTTaGGAGGGCTGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: WQDVGINDPLHPPDPEHDFIVAS*EGCSSS
Trigger: GGAGGAGCTGCAGCCCTCGCAAGAAGCCACGATGAA...ATCATGCTCCGGATCTGGAGGGTGAAGAGGGTCATTGATGCCTACGTCCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp ACCGCCGAGTTTGAGGGGCATGTCCAGAGAGAAGAGGTCCGAGGAGATGTTGGGGCCTCAGGGACCCTGTaGAGCTTTTGCTCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: TAEFEGHVQREEVRGDVGASGTL*SFCSLD
Trigger: ATCCAAAGAGCAAAAGCTGCACAGGGTCCCTGAGGC...CCCAACATCTCCTCGGACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR CCA 90 bp GAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCGGTCATGTTGAAAGATaGAGCCACAGCCATGGGTTT +
Preference number: 4 (lower is better)
Translates to: EQGEKRRQLWALRSEACGGHVER*SHSHGF
Trigger: AAACCCATGGCTGTGGCTCCATCTTTCAACATGACC...GCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp ACGCTCTCGGCCGCCGTCTCCTCGTCCCACGTGCCGGCCTCCAACACTTTGAAGTTCTATGGCAGGCTGTaGATTGGTCATGTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: TLSAAVSSSHVPASNTLKFYGRL*IGHVER
Trigger: TCTTTCAACATGACCAATCCACAGCCTGCCATAGAA...CTTCAAAGTGTTGGAGGCCGGCACGTGGGACGAGGAGACGGCGGCCGAGAGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp GGGCTGGACAGCCCCTGCTCACAGTGCTGTTCCCTAGAGTCCAGGGTGGGCGTCCAAACTGGAATGCGCTaGAAAACTGGAGAAGCTTTA +
Preference number: 4 (lower is better)
Translates to: GLDSPCSQCCSLESRVGVQTGMR*KTGEAL
Trigger: TAAAGCTTCTCCAGTTTTCCAGCGCATTCCAGTTTG...GACGCCCACCCTGGACTCTAGGGAACAGCACTGTGAGCAGGGGCTGTCCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388942.8
CDS-3UTR CCA 90 bp TGGCAGGACGTAGGCATCAATGACCCTCTTCACCCTCCAGATCCGGAGCATGATGTCCATTGGCCACAGTaGATGCCACCATCGGAGCCA +
Preference number: 4 (lower is better)
Translates to: WQDVGINDPLHPPDPEHDVHWPQ*MPPSEP
Trigger: TGGCTCCGATGGTGGCATCCACTGTGGCCAATGGAC...ATCATGCTCCGGATCTGGAGGGTGAAGAGGGTCATTGATGCCTACGTCCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp AAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGACAAATGACATAGGCAGCACGTGCGGGGCCTaGAGCGCCGCTTCGCGCTCG +
Preference number: 4 (lower is better)
Translates to: KRLRNAHAGMRMRTNDIGSTCGA*SAASRS
Trigger: CGAGCGCGAAGCGGCGCTCCAGGCCCCGCACGTGCT...GCCTATGTCATTTGTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp GCCGGATCTCAAACCCTTGCTCCTGACAGATCTGCGTCAGCCTCTCCAGCTGCTCACCGCTGTCACTGCTaGGCCCATTGTAATACTGAC +
Preference number: 4 (lower is better)
Translates to: AGSQTLAPDRSASASPAAHRCHC*AHCNTD
Trigger: GTCAGTATTACAATGGGCCCAGCAGTGACAGCGGTG...AGCAGCTGGAGAGGCTGACGCAGATCTGTCAGGAGCAAGGGTTTGAGATCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp GGAGATGTTGGGCTGGTGAATGTCTATTGCGGCCGTGGTGACCATACACACAGCACACACAGCTGGCTCTaGGACACCGCTGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: GDVGLVNVYCGRGDHTHSTHSWL*DTAVTA
Trigger: AGCAGTGACAGCGGTGTCCCAGAGCCAGCTGTGTGT...GCTGTGTGTATGGTCACCACGGCCGCAATAGACATTCACCAGCCCAACATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR TCA 90 bp GCCGGATCTCAAACCCTTGCTCCTGACAGATCTGCGTCAGCCTCTCCAGCTGCTGTGGATTGGTCATGTTaGAAGATGGAGCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: AGSQTLAPDRSASASPAAVDWSC*KMEPQP
Trigger: TGGCTGTGGCTCCATCTTTCAACATGACCAATCCAC...AGCAGCTGGAGAGGCTGACGCAGATCTGTCAGGAGCAAGGGTTTGAGATCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR TCA 90 bp AAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGACAAATGACATAGGCCACTCTGGGCCCGGGTaGCTGAGCTGCGGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: KRLRNAHAGMRMRTNDIGHSGPG*LSCGRH
Trigger: GTGCCTCCCGCAGCTCAGTCACCCGGGCCCAGAGTG...GCCTATGTCATTTGTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp ACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGGCCTCCTCCACCTGCTaGTGGGATGGCAGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: TRFVLKRLRNAHAGMRMRASSTC*WDGSGG
Trigger: CCCGCCGCTGCCATCCCAGCAGCAGGTGGAGGAGGC...CCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp CCGGATCTCAAACCCTTGCTCCTGACAGATCTGCGTCAGCCTCTCCAGCTGCTCGCCTTCTCGTACTGCTaGATAACCATCTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: PDLKPLLLTDLRQPLQLLAFSYC*ITISIS
Trigger: GGAGATGGAGATGGTTATCCAGCAGTACGAGAAGGC...GAGCAGCTGGAGAGGCTGACGCAGATCTGTCAGGAGCAAGGGTTTGAGATCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp CAGCTGCTCGTCTTGGATGACCTTGGCCTTCTCGTACTGCTGGATAACCATCTCATGGGCACAGTGGGCTaGAAGTGGATGACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: QLLVLDDLGLLVLLDNHLMGTVG*KWMTGL
Trigger: CAGGCCTGTCATCCACTTCCAGCCCACTGTGCCCAT...GAGATGGTTATCCAGCAGTACGAGAAGGCCAAGGTCATCCAAGACGAGCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR TCA 90 bp ACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGCGGCCTCCAACACTTTaGAGCGGCTGCGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TRFVLKRLRNAHAGMRMRRPPTL*SGCAAG
Trigger: GCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCG...CCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp TCCTTCATCGTGGCTTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCCATTGTAATACTGACTaGTGTAGCTGTTCATGTCGT +
Preference number: 4 (lower is better)
Translates to: SFIVASCEGCSSSTTLSAHCNTD*CSCSCR
Trigger: ACGACATGAACAGCTACATCAGTCAGTATTACAATG...GGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGCCACGATGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp ACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGAGCCCAGCGTCTGGCTaGTGTCACTCTGGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: TRFVLKRLRNAHAGMRMRSPASG*CHSGPG
Trigger: CCCGGGCCCAGAGTGACAGCAGCCAGACGCTGGGCT...CCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp TGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGGCTGGACAGCTTCTATGGCAGGCTGTaGATTGGTCATGTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: WTPPRIPGKDGLGVGLDSFYGRL*IGHVER
Trigger: TCTTTCAACATGACCAATCCACAGCCTGCCATAGAA...GCTGTCCAGCCCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp TCCCAGGGGCTCCTGGGTCCATTGGCCACAGTGGATGCCACCATCGGAGCCAAATTCTATGGCAGGCTGTaGATTGGTCATGTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: SQGLLGPLATVDATIGAKFYGRL*IGHVER
Trigger: TCTTTCAACATGACCAATCCACAGCCTGCCATAGAA...TTTGGCTCCGATGGTGGCATCCACTGTGGCCAATGGACCCAGGAGCCCCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp GGTGGTCTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGGCCTTCTCGTACTGCTaGATAACCATCTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: GGLRVIVLDSTQDSWERRAFSYC*ITISIS
Trigger: GGAGATGGAGATGGTTATCCAGCAGTACGAGAAGGC...CCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCACACGGAGACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp GTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGCCCTCCTGGTTCTTCTaGTTGAACAGACTTACCCTG +
Preference number: 4 (lower is better)
Translates to: VIVLDSTQDSWERRLRGGPSWFF*LNRLTL
Trigger: CAGGGTAAGTCTGTTCAACCAGAAGAACCAGGAGGG...CCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp CAGCTGCTCGTCTTGGATGACCTTGGCCTTCTCGTACTGCTGGATAACCATCTCACTTGTCCTCCAGCATaGGCACAGTGGGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: QLLVLDDLGLLVLLDNHLTCPPA*AQWAGS
Trigger: ACTTCCAGCCCACTGTGCCCATGCTGGAGGACAAGT...GAGATGGTTATCCAGCAGTACGAGAAGGCCAAGGTCATCCAAGACGAGCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR CCA 90 bp TCCCAGGGGCTCCTGGGTCCATTGGCCACAGTGGATGCCACCATCGGAGCCAAACAGAAACGCTCATGCTaGAATGAGAATGAGGACAAA +
Preference number: 4 (lower is better)
Translates to: SQGLLGPLATVDATIGAKQKRSC*NENEDK
Trigger: TTTGTCCTCATTCTCATTCCAGCATGAGCGTTTCTG...TTTGGCTCCGATGGTGGCATCCACTGTGGCCAATGGACCCAGGAGCCCCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484722.5
3UTR CAA 72 bp GACATAGGCTCAGATGGTGGTCTCCGTGTGATTGTGTaGGACTCCACCCAGGATTCCTGGGAAAGACGGCTT +
Preference number: 4 (lower is better)
Translates to: DIGSDGGLRVIV*DSTQDSWERRL
Trigger: AAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCACACGGAGACCACCATCTGAGCCTATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp GGTGGTCTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCCTGGTTCTTCTGGTTaGACAGACTTACCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: GGLRVIVLDSTQDSWERRPGSSG*TDLPCV
Trigger: AACACAGGGTAAGTCTGTTCAACCAGAAGAACCAGG...CCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCACACGGAGACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp ATTACCGCCGAGTTTGAGGGGCATGTCCAGAGAGAAGAGGTCCGAGGAGATGTTATTGGCCACAGTGGATaGCACCATCGGAGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: ITAEFEGHVQREEVRGDVIGHSG*HHRSQR
Trigger: TCTTTGGCTCCGATGGTGGCATCCACTGTGGCCAAT...AACATCTCCTCGGACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR GCA 90 bp AAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGACAAATGACATAGGCCCTCGCGGGCAGTGCTaGAGTCCATGGAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KRLRNAHAGMRMRTNDIGPRGQC*SPWRSP
Trigger: TGGGCTCCTCCATGGACTGCAGCACTGCCCGCGAGG...GCCTATGTCATTTGTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp CCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGCTCCTCGCGGGCAGTaGTGCAGTCCATGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PVKVKTRFVLKRLRNAHAAPRGQ*CSPWRS
Trigger: GCTCCTCCATGGACTGCAGCACTGCCCGCGAGGAGC...AGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp CCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGCTGCGAGCCCGCCGTaGAGAGATCGACAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PVKVKTRFVLKRLRNAHAAASPP*RDRQQP
Trigger: TGGCTGCTGTCGATCTCTCCACGGCGGGCTCGCAGC...AGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp CCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTCGTCCCAGGGGCTCCTaGGTCCATTGGCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: PVKVKTRFVLKRLRNAHARPRGS*VHWPQW
Trigger: CCACTGTGGCCAATGGACCCAGGAGCCCCTGGGACG...AGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp TGGCTCTGGGACACCGCTGTCACTGCTGGGCCCATTGTAATACTGACTGATGTACACCGCTGTCACTGCTaGGCCCATTGTAATACTGAC +
Preference number: 4 (lower is better)
Translates to: WLWDTAVTAGPIVILTDVHRCHC*AHCNTD
Trigger: GTCAGTATTACAATGGGCCCAGCAGTGACAGCGGTG...TACATCAGTCAGTATTACAATGGGCCCAGCAGTGACAGCGGTGTCCCAGAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp ATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGACAAACACCTGCTGCTGGGATaGCAGCGGCGGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: IRLEETQKRSCWNENEDKHLLLG*QRRGRR
Trigger: CCTTCTCCCCCGCCGCTGCCATCCCAGCAGCAGGTG...TTTGTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTTCAAGACGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp GTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGACAGTGAAGCCCTCCTaGTTCTTCTGGTTGAACAGA +
Preference number: 4 (lower is better)
Translates to: VIVLDSTQDSWERRLRGGTVKPS*FFWLNR
Trigger: TCTGTTCAACCAGAAGAACCAGGAGGGCTTCACTGT...CCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp GGTGGTCTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCATAGGCTCAGATGGTaGTCTCCGTGTGATTGTGTT +
Preference number: 4 (lower is better)
Translates to: GGLRVIVLDSTQDSWERRHRLRW*SPCDCV
Trigger: AACACAATCACACGGAGACCACCATCTGAGCCTATG...CCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCACACGGAGACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp CTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGCCAAGGTTGGAAAATaGTTGTTCCCCTGCCCTCTA +
Preference number: 4 (lower is better)
Translates to: LRVIVLDSTQDSWERRLRAKVGK*LFPCPL
Trigger: TAGAGGGCAGGGGAACAACCATTTTCCAACCTTGGC...CCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCACACGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp ATAGGCTCAGATGGTGGTCTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCGAGCCAAAGATAGGATaGTCACAGCCCCGTCAAACA +
Preference number: 4 (lower is better)
Translates to: IGSDGGLRVIVLDSTQDSEPKIG*SQPRQT
Trigger: TGTTTGACGGGGCTGTGATCATCCTATCTTTGGCTC...GGAATCCTGGGTGGAGTCCAACACAATCACACGGAGACCACCATCTGAGCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp GCCGGATCTCAAACCCTTGCTCCTGACAGATCTGCGTCAGCCTCTCCAGCTGCTAAACTAGATTCGTCTTaGAGAGACTCAGAAACGCTC +
Preference number: 4 (lower is better)
Translates to: AGSQTLAPDRSASASPAAKLDSS*RDSETL
Trigger: GAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTT...AGCAGCTGGAGAGGCTGACGCAGATCTGTCAGGAGCAAGGGTTTGAGATCCGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR GCA 90 bp TCAGTGCAGCTGGTTTTTATTATTAAAGCCAAGGTTGGAAAATGGTTGTTCCCCAGCCCAGCGTCTGGCTaGTGTCACTCTGGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: SVQLVFIIKAKVGKWLFPSPASG*CHSGPG
Trigger: CCCGGGCCCAGAGTGACAGCAGCCAGACGCTGGGCT...GGGGAACAACCATTTTCCAACCTTGGCTTTAATAATAAAAACCAGCTGCACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp TGGCAGGACGTAGGCATCAATGACCCTCTTCACCCTCCAGATCCGGAGCATGATGCCAGCAAACTGGAATaGGCTGGAAACCTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: WQDVGINDPLHPPDPEHDASKLE*AGNLLF
Trigger: AAAGAGAAGGTTTCCAGCGCATTCCAGTTTGCTGGC...ATCATGCTCCGGATCTGGAGGGTGAAGAGGGTCATTGATGCCTACGTCCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561302.5
CDS-3UTR CCA 90 bp ATAGGCTCAGATGGTGGTCTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCAGCCATGGGTTTTCTTaGTGTTTAGTGGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: IGSDGGLRVIVLDSTQDSSHGFS*CLVGLS
Trigger: GCTGAGCCCCACTAAACACCAAGAAAACCCATGGCT...GGAATCCTGGGTGGAGTCCAACACAATCACACGGAGACCACCATCTGAGCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp ACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGTGGCTGCTGTCACTCTaGGCCCGGGTGACTGAGCTG +
Preference number: 4 (lower is better)
Translates to: TRFVLKRLRNAHAGMRMRWLLSL*ARVTEL
Trigger: CAGCTCAGTCACCCGGGCCCAGAGTGACAGCAGCCA...CCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp TCAGTGCAGCTGGTTTTTATTATTAAAGCCAAGGTTGGAAAATGGTTGTTCCCCGTTCCAGCTCGGGGCTaGTTTGGGCCGAGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: SVQLVFIIKAKVGKWLFPVPARG*FGPSPL
Trigger: CAGCGGGCTCGGCCCAAACCAGCCCCGAGCTGGAAC...GGGGAACAACCATTTTCCAACCTTGGCTTTAATAATAAAAACCAGCTGCACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp ATCCCTTTATATCCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGACGGCCTCCAACACTTTaGAGCGGCTGCGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: IPLYPVKVKTRFVLKRLRRPPTL*SGCAAG
Trigger: GCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCG...TCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGGATATAAAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp ACCGCCGAGTTTGAGGGGCATGTCCAGAGAGAAGAGGTCCGAGGAGATGTTGGGCATTGTAATACTGACTaGTGTAGCTGTTCATGTCGT +
Preference number: 4 (lower is better)
Translates to: TAEFEGHVQREEVRGDVGHCNTD*CSCSCR
Trigger: ACGACATGAACAGCTACATCAGTCAGTATTACAATG...CCCAACATCTCCTCGGACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR TCA 90 bp CCACCCACCTCTAGGTTGATCCCTTTATATCCTGTGAAGGTGAAAACTAGATTCGCCAGCTCTGGGCTTTaGGGTCTGAAGCTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: PPTSRLIPLYPVKVKTRFASSGL*GLKLVA
Trigger: GGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGC...GAATCTAGTTTTCACCTTCACAGGATATAAAGGGATCAACCTAGAGGTGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp ATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGACAAAAGGTGCGCGCGCAGCTaGCGGATCTCAAACCCTTGC +
Preference number: 4 (lower is better)
Translates to: IRLEETQKRSCWNENEDKRCARS*RISNPC
Trigger: GCAAGGGTTTGAGATCCGGCAGCTGCGCGCGCACCT...TTTGTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTTCAAGACGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp TCAGTGCAGCTGGTTTTTATTATTAAAGCCAAGGTTGGAAAATGGTTGTTCCCCCCTCGCGGGCAGTGCTaGAGTCCATGGAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SVQLVFIIKAKVGKWLFPPRGQC*SPWRSP
Trigger: TGGGCTCCTCCATGGACTGCAGCACTGCCCGCGAGG...GGGGAACAACCATTTTCCAACCTTGGCTTTAATAATAAAAACCAGCTGCACTGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp GGAGATGTTGGGCTGGTGAATGTCTATTGCGGCCGTGGTGACCATACACACAGCCAGCATTTCCAAGCGTaGGTTCTACAAGACACATAC +
Preference number: 4 (lower is better)
Translates to: GDVGLVNVYCGRGDHTHSQHFQA*VLQDTY
Trigger: GTATGTGTCTTGTAGAACCCACGCTTGGAAATGCTG...GCTGTGTGTATGGTCACCACGGCCGCAATAGACATTCACCAGCCCAACATCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CCA 90 bp AAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGACAAATGACATAGGCTCTCCGAGGTGGCGCTaGTGCCATTACCGCCGAGTT +
Preference number: 4 (lower is better)
Translates to: KRLRNAHAGMRMRTNDIGSPRWR*CHYRRV
Trigger: AACTCGGCGGTAATGGCACCAGCGCCACCTCGGAGA...GCCTATGTCATTTGTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp CCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTATCTCACCCAGCCCATaGCAGGCTCTAGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PVKVKTRFVLKRLRNAHAISPSP*QALGLR
Trigger: CCTGAGGCCTAGAGCCTGCCATGGGCTGGGTGAGAT...AGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp GTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGCATTGTAATACTGACTaGTGTAGCTGTTCATGTCGT +
Preference number: 4 (lower is better)
Translates to: VIVLDSTQDSWERRLRGGHCNTD*CSCSCR
Trigger: ACGACATGAACAGCTACATCAGTCAGTATTACAATG...CCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp TCAGTGCAGCTGGTTTTTATTATTAAAGCCAAGGTTGGAAAATGGTTGTTCCCCCACACTCTACCCTGCTaGAGCTGGGCCACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SVQLVFIIKAKVGKWLFPHTLPC*SWATGW
Trigger: CCAGCCTGTGGCCCAGCTTCAGCAGGGTAGAGTGTG...GGGGAACAACCATTTTCCAACCTTGGCTTTAATAATAAAAACCAGCTGCACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp ATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGACAAATACCTGCCACACGGCTaGTCTCTTCCCACAGCACGG +
Preference number: 4 (lower is better)
Translates to: IRLEETQKRSCWNENEDKYLPHG*SLPTAR
Trigger: CCGTGCTGTGGGAAGAGAGCAGCCGTGTGGCAGGTA...TTTGTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTTCAAGACGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388942.8
CDS-3UTR GCA 90 bp GGAGATGTTGGGCTGGTGAATGTCTATTGCGGCCGTGGTGACCATACACACAGCACCCTGTGCAGCTTTTaGTCTTTGGATTCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: GDVGLVNVYCGRGDHTHSTLCSF*SLDSKD
Trigger: ATCTTTGGAATCCAAAGAGCAAAAGCTGCACAGGGT...GCTGTGTGTATGGTCACCACGGCCGCAATAGACATTCACCAGCCCAACATCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR GCA 90 bp AAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGACAAATGACATAGGCAGCCCCTGCTCACAGTaGTGTTCCCTAGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: KRLRNAHAGMRMRTNDIGSPCSQ*CSLESR
Trigger: CCTGGACTCTAGGGAACAGCACTGTGAGCAGGGGCT...GCCTATGTCATTTGTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp CCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGTCCATTGGCCACAGTaGATGCCACCATCGGAGCCA +
Preference number: 4 (lower is better)
Translates to: PVKVKTRFVLKRLRNAHAVHWPQ*MPPSEP
Trigger: TGGCTCCGATGGTGGCATCCACTGTGGCCAATGGAC...AGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp TCAGTGCAGCTGGTTTTTATTATTAAAGCCAAGGTTGGAAAATGGTTGTTCCCCAGGCACTCTCCGAGGTaGCGCTGGTGCCATTACCGC +
Preference number: 4 (lower is better)
Translates to: SVQLVFIIKAKVGKWLFPRHSPR*RWCHYR
Trigger: GCGGTAATGGCACCAGCGCCACCTCGGAGAGTGCCT...GGGGAACAACCATTTTCCAACCTTGGCTTTAATAATAAAAACCAGCTGCACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp CCACCCACCTCTAGGTTGATCCCTTTATATCCTGTGAAGGTGAAAACTAGATTCATGGGCACAGTGGGCTaGAAGTGGATGACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PPTSRLIPLYPVKVKTRFMGTVG*KWMTGL
Trigger: CAGGCCTGTCATCCACTTCCAGCCCACTGTGCCCAT...GAATCTAGTTTTCACCTTCACAGGATATAAAGGGATCAACCTAGAGGTGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp CCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGCTGCTCGTCTTGGATaGCCTTGGCCTTCTCGTACT +
Preference number: 4 (lower is better)
Translates to: PVKVKTRFVLKRLRNAHAAARLG*PWPSRT
Trigger: AGTACGAGAAGGCCAAGGTCATCCAAGACGAGCAGC...AGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp AAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGACAAATGACATAGGCGAGATGTTGGGCTGGTaGATGTCTATTGCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: KRLRNAHAGMRMRTNDIGEMLGW*MSIAAV
Trigger: CACGGCCGCAATAGACATTCACCAGCCCAACATCTC...GCCTATGTCATTTGTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp CCACCCACCTCTAGGTTGATCCCTTTATATCCTGTGAAGGTGAAAACTAGATTCATGGTGGTCTCCGTGTaGTTGTGTTGGACTCCACCC +
Preference number: 4 (lower is better)
Translates to: PPTSRLIPLYPVKVKTRFMVVSV*LCWTPP
Trigger: GGGTGGAGTCCAACACAATCACACGGAGACCACCAT...GAATCTAGTTTTCACCTTCACAGGATATAAAGGGATCAACCTAGAGGTGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp CCACCCACCTCTAGGTTGATCCCTTTATATCCTGTGAAGGTGAAAACTAGATTCTGTCGTCCTTCATCGTaGCTTCTTGCGAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PPTSRLIPLYPVKVKTRFCRPSS*LLARAA
Trigger: TGCAGCCCTCGCAAGAAGCCACGATGAAGGACGACA...GAATCTAGTTTTCACCTTCACAGGATATAAAGGGATCAACCTAGAGGTGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp ACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGAAGAGGCGCCAGCTCTaGGCTTTGAGGTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: TRFVLKRLRNAHAGMRMRKRRQL*ALRSEA
Trigger: AGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTT...CCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp ATAGGCTCAGATGGTGGTCTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCCAGAAACGCTCATGCTaGAATGAGAATGAGGACAAA +
Preference number: 4 (lower is better)
Translates to: IGSDGGLRVIVLDSTQDSQKRSC*NENEDK
Trigger: TTTGTCCTCATTCTCATTCCAGCATGAGCGTTTCTG...GGAATCCTGGGTGGAGTCCAACACAATCACACGGAGACCACCATCTGAGCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp ATAGGCTCAGATGGTGGTCTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCCTACTTGTTGGGAGATaGTCTCAACTTCAGAAATTC +
Preference number: 4 (lower is better)
Translates to: IGSDGGLRVIVLDSTQDSLLVGR*SQLQKF
Trigger: GAATTTCTGAAGTTGAGATCATCTCCCAACAAGTAG...GGAATCCTGGGTGGAGTCCAACACAATCACACGGAGACCACCATCTGAGCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp CCACCCACCTCTAGGTTGATCCCTTTATATCCTGTGAAGGTGAAAACTAGATTCATTGGCCACAGTGGATaGCACCATCGGAGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: PPTSRLIPLYPVKVKTRFIGHSG*HHRSQR
Trigger: TCTTTGGCTCCGATGGTGGCATCCACTGTGGCCAAT...GAATCTAGTTTTCACCTTCACAGGATATAAAGGGATCAACCTAGAGGTGGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp AAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGACAAATGACATAGGCGGACACCGCTGTCACTaGTGGGCCCATTGTAATACT +
Preference number: 4 (lower is better)
Translates to: KRLRNAHAGMRMRTNDIGGHRCH*WAHCNT
Trigger: AGTATTACAATGGGCCCAGCAGTGACAGCGGTGTCC...GCCTATGTCATTTGTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp ACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGATCACGCCAGCAAACTaGAATGCGCTGGAAACTGCC +
Preference number: 4 (lower is better)
Translates to: TRFVLKRLRNAHAGMRMRITPAN*NALETA
Trigger: GGCAGTTTCCAGCGCATTCCAGTTTGCTGGCGTGAT...CCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR TCA 90 bp TCAGTGCAGCTGGTTTTTATTATTAAAGCCAAGGTTGGAAAATGGTTGTTCCCCGAGATGTTGGGCTGGTaGATGTCTATTGCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: SVQLVFIIKAKVGKWLFPEMLGW*MSIAAV
Trigger: CACGGCCGCAATAGACATTCACCAGCCCAACATCTC...GGGGAACAACCATTTTCCAACCTTGGCTTTAATAATAAAAACCAGCTGCACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp ACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGATCACGCCAGCAAACTaGAATGCGCTGGAAAACTGG +
Preference number: 4 (lower is better)
Translates to: TRFVLKRLRNAHAGMRMRITPAN*NALENW
Trigger: CCAGTTTTCCAGCGCATTCCAGTTTGCTGGCGTGAT...CCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388942.8
CDS-3UTR CCA 90 bp CCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTCATCTCCAGCTTCACTaGCAGGACGTAGGCATCAAT +
Preference number: 4 (lower is better)
Translates to: PVKVKTRFVLKRLRNAHAHLQLH*QDVGIN
Trigger: ATTGATGCCTACGTCCTGCCAGTGAAGCTGGAGATG...AGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp AAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGACAAATGACATAGGCGGTCCGAGGAGATGTTaGGCTGGTGAATGTCTATTG +
Preference number: 4 (lower is better)
Translates to: KRLRNAHAGMRMRTNDIGGPRRC*AGECLL
Trigger: CAATAGACATTCACCAGCCCAACATCTCCTCGGACC...GCCTATGTCATTTGTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp CCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGGTCCGAGGAGATGTTaGGCTGGTGAATGTCTATTG +
Preference number: 4 (lower is better)
Translates to: PVKVKTRFVLKRLRNAHAGPRRC*AGECLL
Trigger: CAATAGACATTCACCAGCCCAACATCTCCTCGGACC...AGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp CCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTAGGAGAGCTTTGAGATaGCTGTCTCCCCTCATCTCA +
Preference number: 4 (lower is better)
Translates to: PVKVKTRFVLKRLRNAHARRALR*LSPLIS
Trigger: TGAGATGAGGGGAGACAGCCATCTCAAAGCTCTCCT...AGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp ATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGACAAAGTGGATTGGTCATGTTaGAAGATGGAGCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: IRLEETQKRSCWNENEDKVDWSC*KMEPQP
Trigger: TGGCTGTGGCTCCATCTTTCAACATGACCAATCCAC...TTTGTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTTCAAGACGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp CCACCCACCTCTAGGTTGATCCCTTTATATCCTGTGAAGGTGAAAACTAGATTCCCTGGTTCTTCTGGTTaGACAGACTTACCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: PPTSRLIPLYPVKVKTRFPGSSG*TDLPCV
Trigger: AACACAGGGTAAGTCTGTTCAACCAGAAGAACCAGG...GAATCTAGTTTTCACCTTCACAGGATATAAAGGGATCAACCTAGAGGTGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp ACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGGCTGCACAGGAGCAATaGTCTTGGTTTCTTCGTCTA +
Preference number: 4 (lower is better)
Translates to: TRFVLKRLRNAHAGMRMRAAQEQ*SWFLRL
Trigger: TAGACGAAGAAACCAAGAGCATTGCTCCTGTGCAGC...CCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp CCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTTTGGCCTTCTCGTACTaGTGGATAACCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: PVKVKTRFVLKRLRNAHALAFSY*WITISI
Trigger: GATGGAGATGGTTATCCAGCAGTACGAGAAGGCCAA...AGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp TCAGTGCAGCTGGTTTTTATTATTAAAGCCAAGGTTGGAAAATGGTTGTTCCCCCACCGCTGTCACTGCTaGGCCCATTGTAATACTGAC +
Preference number: 4 (lower is better)
Translates to: SVQLVFIIKAKVGKWLFPHRCHC*AHCNTD
Trigger: GTCAGTATTACAATGGGCCCAGCAGTGACAGCGGTG...GGGGAACAACCATTTTCCAACCTTGGCTTTAATAATAAAAACCAGCTGCACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp ATCCCTTTATATCCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGAAAGAGGCGCCAGCTCTaGGCTTTGAGGTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: IPLYPVKVKTRFVLKRLRKRRQL*ALRSEA
Trigger: AGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTT...TCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGGATATAAAGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp CCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTCAGCATTTCCAAGCGTaGGTTCTACAAGACACATAC +
Preference number: 4 (lower is better)
Translates to: PVKVKTRFVLKRLRNAHAQHFQA*VLQDTY
Trigger: GTATGTGTCTTGTAGAACCCACGCTTGGAAATGCTG...AGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp ACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGAAACTAGATTCGTCTTaGAGAGACTCAGAAACGCTC +
Preference number: 4 (lower is better)
Translates to: TRFVLKRLRNAHAGMRMRKLDSS*RDSETL
Trigger: GAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTT...CCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR GCA 90 bp AAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGACAAATGACATAGGCGAAACTGTTGAGACTTaGACTGAGCAAAAATACCTG +
Preference number: 4 (lower is better)
Translates to: KRLRNAHAGMRMRTNDIGETVET*TEQKYL
Trigger: CAGGTATTTTTGCTCAGTGCAAGTCTCAACAGTTTC...GCCTATGTCATTTGTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388942.8
CDS-3UTR CCA 90 bp TCAGTGCAGCTGGTTTTTATTATTAAAGCCAAGGTTGGAAAATGGTTGTTCCCCAAATTCCTCCTTCTATaGCAGGCTGTGGATTGGTCA +
Preference number: 4 (lower is better)
Translates to: SVQLVFIIKAKVGKWLFPKFLLL*QAVDWS
Trigger: TGACCAATCCACAGCCTGCCATAGAAGGAGGAATTT...GGGGAACAACCATTTTCCAACCTTGGCTTTAATAATAAAAACCAGCTGCACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
3UTR CAA 72 bp CCTTTATATCCTGTGAAGGTGAAAACTAGATTCGTCTaGAAGAGACTCAGAAACGCTCATGCTGGAATGAGA +
Preference number: 4 (lower is better)
Translates to: PLYPVKVKTRFV*KRLRNAHAGMR
Trigger: TCTCATTCCAGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGGATATAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR TCA 90 bp TCAGTGCAGCTGGTTTTTATTATTAAAGCCAAGGTTGGAAAATGGTTGTTCCCCCTACTTGTTGGGAGATaGTCTCAACTTCAGAAATTC +
Preference number: 4 (lower is better)
Translates to: SVQLVFIIKAKVGKWLFPLLVGR*SQLQKF
Trigger: GAATTTCTGAAGTTGAGATCATCTCCCAACAAGTAG...GGGGAACAACCATTTTCCAACCTTGGCTTTAATAATAAAAACCAGCTGCACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CCA 90 bp CCACCCACCTCTAGGTTGATCCCTTTATATCCTGTGAAGGTGAAAACTAGATTCAATGCGCTGGAAAACTaGAGAAGCTTTATATCTATT +
Preference number: 4 (lower is better)
Translates to: PPTSRLIPLYPVKVKTRFNALEN*RSFISI
Trigger: AATAGATATAAAGCTTCTCCAGTTTTCCAGCGCATT...GAATCTAGTTTTCACCTTCACAGGATATAAAGGGATCAACCTAGAGGTGGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388942.8
CDS TCA 90 bp CGCGCAGCTGCCGGATCTCAAACTGCGGAGGGAGACGGGCAAGGCTaGATCAGCGGCGAGGGGCCGGCGGGGGCCTCCAGCCTGACCTCT +
Preference number: 5 (lower is better)
Translates to: RAAAGSQTAEGDGQG*ISGEGPAGASSLTS
Trigger: AGAGGTCAGGCTGGAGGCCCCCGCCGGCCCCTCGCCGCTGATTCAGCCTTGCCCGTCTCCCTCCGCAGTTTGAGATCCGGCAGCTGCGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558249.1
CDS-3UTR CAA 90 bp GGGATGGCAGCGGCGGGGGAGAAGGGCCGGGCTCAGAGGACGGCTCCTCGCGGGCCATTACCGCCGAGTTaGAGGGGCATGTCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: GMAAAGEKGRAQRTAPRGPLPPS*RGMSRE
Trigger: CTCTCTGGACATGCCCCTCAAACTCGGCGGTAATGG...CCCGCGAGGAGCCGTCCTCTGAGCCCGGCCCTTCTCCCCCGCCGCTGCCATCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CAA 90 bp AGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGGGGCTCCTGGGTCCATaGGCCACAGTGGATGCCACC +
Preference number: 5 (lower is better)
Translates to: SHEHHPPLSRARRGASSGGLLGP*ATVDAT
Trigger: GGTGGCATCCACTGTGGCCAATGGACCCAGGAGCCC...CCCAGAGCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCT
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CAA 90 bp CACGTGCCGGCCTCCAACACTTTGAAGCGGCTGCGCGGCTGGCTGAGCACGTGCCCGGCCTCCAACACTTaGAAGCGGCTGCGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: HVPASNTLKRLRGWLSTCPASNT*KRLRGW
Trigger: CCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGG...GCACGTGCTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGGCACGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CAA 90 bp CCACCTGCTGCTGGGATGGCAGCGGCGGGGGAGAAGGGCCGGGCTCAGAGGACGCTTCATCGTGGCTTCTaGCGAGGGCTGCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: PPAAGMAAAGEKGRAQRTLHRGF*RGLQLL
Trigger: GAGGAGCTGCAGCCCTCGCAAGAAGCCACGATGAAG...CGTCCTCTGAGCCCGGCCCTTCTCCCCCGCCGCTGCCATCCCAGCAGCAGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CAA 90 bp TCCTTCATCGTGGCTTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCCCCCGCGTGTGGCCCTaGGCAGCCTCCAGGGTCCCA +
Preference number: 5 (lower is better)
Translates to: SFIVASCEGCSSSTTLSAPRVWP*AASRVP
Trigger: TGGGACCCTGGAGGCTGCCAAGGGCCACACGCGGGG...GGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGCCACGATGAAGGA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS GCA 90 bp TCGGCAGCCAGGTCCAGGTCCTGCTGCGCCAGGTGCGCGCGCAGCTaGCGGATCTCAAACTGCGGAGGGAGACGGGCAAGGCTGAATCAG +
Preference number: 5 (lower is better)
Translates to: SAARSRSCCARCARS*RISNCGGRRARLNQ
Trigger: CTGATTCAGCCTTGCCCGTCTCCCTCCGCAGTTTGAGATCCGGCAGCTGCGCGCGCACCTGGCGCAGCAGGACCTGGACCTGGCTGCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558249.1
CDS-3UTR CAA 90 bp ACGCTCTCGGCCGCCGTCTCCTCGTCCCACGTGCCGGCCTCCAACACTTTGAAGCCGGCCTCCAACACTTaGAAGCGGCTGCGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: TLSAAVSSSHVPASNTLKPASNT*KRLRGW
Trigger: CCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGG...CTTCAAAGTGTTGGAGGCCGGCACGTGGGACGAGGAGACGGCGGCCGAGAGCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CAA 90 bp AAGAAAACCCAGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCGGGCTCCTGGGTCCATaGGCCACAGTGGATGCCACC +
Preference number: 5 (lower is better)
Translates to: KKTQPRAPPSPEQGEKRRGLLGP*ATVDAT
Trigger: GGTGGCATCCACTGTGGCCAATGGACCCAGGAGCCC...GCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCTGGGTTTTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CAA 90 bp AAACCCAGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCCTTCATCGTGGCTTCTaGCGAGGGCTGCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: KPSHEHHPPLSRARRGASLHRGF*RGLQLL
Trigger: GAGGAGCTGCAGCCCTCGCAAGAAGCCACGATGAAG...GCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCTGGGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CAA 90 bp TTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGGCTGCCCCGCGTGTGGCCCTaGGCAGCCTCCAGGGTCCCA +
Preference number: 5 (lower is better)
Translates to: LCWTPPRIPGKDGLGVGLPRVWP*AASRVP
Trigger: TGGGACCCTGGAGGCTGCCAAGGGCCACACGCGGGG...CAGCCCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CAA 90 bp AAACCCAGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCCTCCAGCTGCTCGTCTaGGATGACCTTGGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: KPSHEHHPPLSRARRGASLQLLV*DDLGLL
Trigger: GAGAAGGCCAAGGTCATCCAAGACGAGCAGCTGGAG...GCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCTGGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CAA 90 bp CACGTGCCGGCCTCCAACACTTTGAAGCGGCTGCGCGGCTGGCTGAGCACGTGCCTCCAGCTGCTCGTCTaGGATGACCTTGGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: HVPASNTLKRLRGWLSTCLQLLV*DDLGLL
Trigger: GAGAAGGCCAAGGTCATCCAAGACGAGCAGCTGGAG...GCACGTGCTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGGCACGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CAA 90 bp GCTTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCGCCGTCTCCTCGCCGGATCTCAAACCCTaGCTCCTGACAGATCTGCGT +
Preference number: 5 (lower is better)
Translates to: ASCEGCSSSTTLSAAVSSPDLKP*LLTDLR
Trigger: ACGCAGATCTGTCAGGAGCAAGGGTTTGAGATCCGG...CGAGGAGACGGCGGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CAA 90 bp CTCGTCCCACGTGCCGGCCTCCAACACTTTGAAGCGGCTGCGCGGCTGGCTGAGCCATTACCGCCGAGTTaGAGGGGCATGTCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: LVPRAGLQHFEAAARLAEPLPPS*RGMSRE
Trigger: CTCTCTGGACATGCCCCTCAAACTCGGCGGTAATGG...CTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGGCACGTGGGACGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CAA 90 bp CCACCTGCTGCTGGGATGGCAGCGGCGGGGGAGAAGGGCCGGGCTCAGAGGACGATGGCAGGCTGTGGATaGGTCATGTTGAAAGATGGA +
Preference number: 5 (lower is better)
Translates to: PPAAGMAAAGEKGRAQRTMAGCG*VMLKDG
Trigger: TCCATCTTTCAACATGACCAATCCACAGCCTGCCAT...CGTCCTCTGAGCCCGGCCCTTCTCCCCCGCCGCTGCCATCCCAGCAGCAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CAA 90 bp TTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCGCCGTCTCCTCGTCAATCTTCGTCCAGATTaGACAGGAGCTGCGAGCCCG +
Preference number: 5 (lower is better)
Translates to: FLRGLQLLHDALGRRLLVNLRPD*TGAASP
Trigger: CGGGCTCGCAGCTCCTGTCAAATCTGGACGAAGATT...GACGAGGAGACGGCGGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CAA 90 bp TCCTTCATCGTGGCTTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCCTTCATCGTGGCTTCTaGCGAGGGCTGCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: SFIVASCEGCSSSTTLSALHRGF*RGLQLL
Trigger: GAGGAGCTGCAGCCCTCGCAAGAAGCCACGATGAAG...GGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGCCACGATGAAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CAA 90 bp TGTGTTCCAGCTCGGGGCTGGTTTGGGCCGAGCCCGCTGGGCTGGGCCGGGCGATCCTGGTTCTTCTGGTaGAACAGACTTACCCTGTGT +
Preference number: 5 (lower is better)
Translates to: CVPARGWFGPSPLGWAGRSWFFW*NRLTLC
Trigger: ACACAGGGTAAGTCTGTTCAACCAGAAGAACCAGGA...TCGCCCGGCCCAGCCCAGCGGGCTCGGCCCAAACCAGCCCCGAGCTGGAACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR CAA 90 bp TCCTTCATCGTGGCTTCTTGCGAGGGCTGCAGCTCCTCCACGACGCTCTCGGCCCGCCAGCTCTGGGCTTaGAGGTCTGAAGCTTGTGGC +
Preference number: 5 (lower is better)
Translates to: SFIVASCEGCSSSTTLSARQLWA*RSEACG
Trigger: GCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCG...GGCCGAGAGCGTCGTGGAGGAGCTGCAGCCCTCGCAAGAAGCCACGATGAAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR CAA 90 bp AGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGTGTGGATTGGTCATGTaGAAAGATGGAGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: SHEHHPPLSRARRGASSGCGLVM*KDGATA
Trigger: GGCTGTGGCTCCATCTTTCAACATGACCAATCCACA...CCCAGAGCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CAA 90 bp CAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCTCGGTCCCAGGAGAGCTTaGAGATGGCTGTCTCCCCTC +
Preference number: 5 (lower is better)
Translates to: QGEKRRQLWALRSEACGLGPRRA*RWLSPL
Trigger: GAGGGGAGACAGCCATCTCAAAGCTCTCCTGGGACC...GAGGCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CAA 90 bp GGGCTGGACAGCCCCTGCTCACAGTGCTGTTCCCTAGAGTCCAGGGTGGGCGTCCTCCGTGTGATTGTGTaGGACTCCACCCAGGATTCC +
Preference number: 5 (lower is better)
Translates to: GLDSPCSQCCSLESRVGVLRVIV*DSTQDS
Trigger: GGAATCCTGGGTGGAGTCCAACACAATCACACGGAG...GACGCCCACCCTGGACTCTAGGGAACAGCACTGTGAGCAGGGGCTGTCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS GCA 90 bp TGCGGAGCCTTTTCCAACCTGTGCGATCCTGCGTCTCAGGTGCCTTaGAGTCTGGCCCCCATCTCACGGATGCCCGGGAGAGGAAACACA +
Preference number: 5 (lower is better)
Translates to: CGAFSNLCDPASQVP*SLAPISRMPGRGNT
Trigger: TGTGTTTCCTCTCCCGGGCATCCGTGAGATGGGGGCCAGACTGCAAGGCACCTGAGACGCAGGATCGCACAGGTTGGAAAAGGCTCCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558249.1
CDS-3UTR CAA 90 bp AAACCCAGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCAGCTGTGGATTGGTCATGTaGAAAGATGGAGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: KPSHEHHPPLSRARRGASCGLVM*KDGATA
Trigger: GGCTGTGGCTCCATCTTTCAACATGACCAATCCACA...GCTGGCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCTGGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CAA 90 bp GGCACTCTCCGAGGTGGCGCTGGTGCCATTACCGCCGAGTTTGAGGGGCATGTCTCGTCTTGGATGACCTaGGCCTTCTCGTACTGCTGG +
Preference number: 5 (lower is better)
Translates to: GTLRGGAGAITAEFEGHVSSWMT*AFSYCW
Trigger: CCAGCAGTACGAGAAGGCCAAGGTCATCCAAGACGA...GACATGCCCCTCAAACTCGGCGGTAATGGCACCAGCGCCACCTCGGAGAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CAA 90 bp CTCGTCCCACGTGCCGGCCTCCAACACTTTGAAGCGGCTGCGCGGCTGGCTGAGATGGCAGGCTGTGGATaGGTCATGTTGAAAGATGGA +
Preference number: 5 (lower is better)
Translates to: LVPRAGLQHFEAAARLAEMAGCG*VMLKDG
Trigger: TCCATCTTTCAACATGACCAATCCACAGCCTGCCAT...CTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGGCACGTGGGACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CAA 90 bp TTACCGCCGAGTTTGAGGGGCATGTCCAGAGAGAAGAGGTCCGAGGAGATGTTGGGGCTCCTGGGTCCATaGGCCACAGTGGATGCCACC +
Preference number: 5 (lower is better)
Translates to: LPPSLRGMSREKRSEEMLGLLGP*ATVDAT
Trigger: GGTGGCATCCACTGTGGCCAATGGACCCAGGAGCCC...CAACATCTCCTCGGACCTCTTCTCTCTGGACATGCCCCTCAAACTCGGCGGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CAA 90 bp ATAGGCTCAGATGGTGGTCTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCCCGGCCTCCAACACTTaGAAGCGGCTGCGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: IGSDGGLRVIVLDSTQDSPASNT*KRLRGW
Trigger: CCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGG...GGAATCCTGGGTGGAGTCCAACACAATCACACGGAGACCACCATCTGAGCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS GCA 90 bp AAGAGCTTCTTACGGTTGCGGAGCCTTTTCCAACCTGTGCGATCCTaGGTCTCAGGTGCCTTGCAGTCTGGCCCCCATCTCACGGATGCC +
Preference number: 5 (lower is better)
Translates to: KSFLRLRSLFQPVRS*VSGALQSGPHLTDA
Trigger: GGCATCCGTGAGATGGGGGCCAGACTGCAAGGCACCTGAGACGCAGGATCGCACAGGTTGGAAAAGGCTCCGCAACCGTAAGAAGCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558249.1
CDS GCA 90 bp CGGTTCGCAAGAGCTTCTTACGGTTGCGGAGCCTTTTCCAACCTGTaGGATCCTGCGTCTCAGGTGCCTTGCAGTCTGGCCCCCATCTCA +
Preference number: 5 (lower is better)
Translates to: RFARASYGCGAFSNL*DPASQVPCSLAPIS
Trigger: TGAGATGGGGGCCAGACTGCAAGGCACCTGAGACGCAGGATCGCACAGGTTGGAAAAGGCTCCGCAACCGTAAGAAGCTCTTGCGAACCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558249.1
CDS CCA 90 bp CCTTTTCCAACCTGTGCGATCCTGCGTCTCAGGTGCCTTGCAGTCTaGCCCCCATCTCACGGATGCCCGGGAGAGGAAACACAACGTGTT +
Preference number: 5 (lower is better)
Translates to: PFPTCAILRLRCLAV*PPSHGCPGEETQRV
Trigger: AACACGTTGTGTTTCCTCTCCCGGGCATCCGTGAGATGGGGGCCAGACTGCAAGGCACCTGAGACGCAGGATCGCACAGGTTGGAAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558249.1
CDS-3UTR CAA 90 bp GAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCCAGCCATGGGTTTTCTaGGTGTTTAGTGGGGCTCAG +
Preference number: 5 (lower is better)
Translates to: EQGEKRRQLWALRSEACGQPWVF*VFSGAQ
Trigger: CTGAGCCCCACTAAACACCAAGAAAACCCATGGCTG...GCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CAA 90 bp TTCCCTAGAGTCCAGGGTGGGCGTCAGGAACGAAGGCAACGCAAGAGGCTGAGCCCGGATCTCAAACCCTaGCTCCTGACAGATCTGCGT +
Preference number: 5 (lower is better)
Translates to: FPRVQGGRQERRQRKRLSPDLKP*LLTDLR
Trigger: ACGCAGATCTGTCAGGAGCAAGGGTTTGAGATCCGG...GCTCAGCCTCTTGCGTTGCCTTCGTTCCTGACGCCCACCCTGGACTCTAGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CAA 90 bp AAGAAAACCCAGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCCCACCCACCTCTAGGTaGATCCCTTTATATCCTGTG +
Preference number: 5 (lower is better)
Translates to: KKTQPRAPPSPEQGEKRRPPTSR*IPLYPV
Trigger: CACAGGATATAAAGGGATCAACCTAGAGGTGGGTGG...GCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCTGGGTTTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS GCA 90 bp ATCCTGCGTCTCAGGTGCCTTGCAGTCTGGCCCCCATCTCACGGATaGCCGGGAGAGGAAACACAACGTGTTTCCTTTGTGGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: ILRLRCLAVWPPSHG*PGEETQRVSFVERP
Trigger: TGGCCTTTCCACAAAGGAAACACGTTGTGTTTCCTCTCCCGGGCATCCGTGAGATGGGGGCCAGACTGCAAGGCACCTGAGACGCAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558249.1
CDS CCA 90 bp CAGAACTGGTGTCACTGCTTCCACTTGAGGCCAGTGGGGAGGGGCTaGATTTCCTCTCTCTCTTGCCCACTTCAACGGTACCTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: QNWCHCFHLRPVGRG*ISSLSCPLQRYLSQ
Trigger: CTGGGAGAGGTACCGTTGAAGTGGGCAAGAGAGAGAGGAAATCCAGCCCCTCCCCACTGGCCTCAAGTGGAAGCAGTGACACCAGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559079.5
CDS-3UTR CAA 90 bp CGTCTCCTCGTCCCACGTGCCGGCCTCCAACACTTTGAAGCGGCTGCGCGGCTGTTCTTCGTCTACTTGTaGGGAGATGATCTCAACTTC +
Preference number: 5 (lower is better)
Translates to: RLLVPRAGLQHFEAAARLFFVYL*GDDLNF
Trigger: GAAGTTGAGATCATCTCCCAACAAGTAGACGAAGAA...CAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGGCACGTGGGACGAGGAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CAA 90 bp CTCGTCCCACGTGCCGGCCTCCAACACTTTGAAGCGGCTGCGCGGCTGGCTGAGTTCTTCGTCTACTTGTaGGGAGATGATCTCAACTTC +
Preference number: 5 (lower is better)
Translates to: LVPRAGLQHFEAAARLAEFFVYL*GDDLNF
Trigger: GAAGTTGAGATCATCTCCCAACAAGTAGACGAAGAA...CTCAGCCAGCCGCGCAGCCGCTTCAAAGTGTTGGAGGCCGGCACGTGGGACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS TCA 90 bp GGCCCTCCAATCCAAACTTTCAGAACTGGTGTCACTGCTTCCACTTaGGGCCAGTGGGGAGGGGCTGGATTTCCTCTCTCTCTTGCCCAC +
Preference number: 5 (lower is better)
Translates to: GPPIQTFRTGVTAST*GQWGGAGFPLSLAH
Trigger: GTGGGCAAGAGAGAGAGGAAATCCAGCCCCTCCCCACTGGCCTCAAGTGGAAGCAGTGACACCAGTTCTGAAAGTTTGGATTGGAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559079.5
CDS GCA 90 bp CTTAGGAATCTCCCAGCATCGCGGTTCGCAAGAGCTTCTTACGGTTaGGGAGCCTTTTCCAACCTGTGCGATCCTGCGTCTCAGGTGCCT +
Preference number: 5 (lower is better)
Translates to: LRNLPASRFARASYG*GAFSNLCDPASQVP
Trigger: AGGCACCTGAGACGCAGGATCGCACAGGTTGGAAAAGGCTCCGCAACCGTAAGAAGCTCTTGCGAACCGCGATGCTGGGAGATTCCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558249.1
CDS CCA 90 bp TTTGGTAATCTTCGTCCAGATTTGACAGGAGCTGCGAGCCCGCCGTaGAGAGATCGACAGCAGCCAGGGGCAAGTCCCGATAGGCAAAGT +
Preference number: 5 (lower is better)
Translates to: FGNLRPDLTGAASPP*RDRQQPGASPDRQS
Trigger: ACTTTGCCTATCGGGACTTGCCCCTGGCTGCTGTCGATCTCTCCACGGCGGGCTCGCAGCTCCTGTCAAATCTGGACGAAGATTACCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388942.8
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CAA 90 bp GAGCAGGGCGAGAAGAGGCGCCAGCTCTGGGCTTTGAGGTCTGAAGCTTGTGGCTCCTGGTTCTTCTGGTaGAACAGACTTACCCTGTGT +
Preference number: 5 (lower is better)
Translates to: EQGEKRRQLWALRSEACGSWFFW*NRLTLC
Trigger: ACACAGGGTAAGTCTGTTCAACCAGAAGAACCAGGA...GCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCGCCTCTTCTCGCCCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS TCA 90 bp CTTCAGCCAGTTAGACCCTTCTCTTTGGTAATCTTCGTCCAGATTTaGCAGGAGCTGCGAGCCCGCCGTGGAGAGATCGACAGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: LQPVRPFSLVIFVQI*QELRARRGEIDSSQ
Trigger: CTGGCTGCTGTCGATCTCTCCACGGCGGGCTCGCAGCTCCTGTCAAATCTGGACGAAGATTACCAAAGAGAAGGGTCTAACTGGCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS TCA 90 bp TGGAATGCGCTGGAAACCTTCTCTTTGGTAATCTTCGTCCAGATTTaGCAGGAGCTGCGAGCCCGCCGTGGAGAGATCGACAGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: WNALETFSLVIFVQI*QELRARRGEIDSSQ
Trigger: CTGGCTGCTGTCGATCTCTCCACGGCGGGCTCGCAGCTCCTGTCAAATCTGGACGAAGATTACCAAAGAGAAGGTTTCCAGCGCATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561302.5
CDS GCA 90 bp ACTCCTACCTGGCCCTCCAATCCAAACTTTCAGAACTGGTGTCACTaGTTCCACTTGAGGCCAGTGGGGAGGGGCTGGATTTCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: TPTWPSNPNFQNWCH*FHLRPVGRGWISSL
Trigger: GAGAGAGGAAATCCAGCCCCTCCCCACTGGCCTCAAGTGGAAGCAGTGACACCAGTTCTGAAAGTTTGGATTGGAGGGCCAGGTAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559079.5
CDS CCA 90 bp GTGGGGCTCAGCTGTCCTGAAGCCTGCTGTCAGCATTTCCAAGCGTaGGTTCTACAAGACACATACAAATATAGTGCCCTGCTGCCCGGG +
Preference number: 5 (lower is better)
Translates to: VGLSCPEACCQHFQA*VLQDTYKYSALLPG
Trigger: CCCGGGCAGCAGGGCACTATATTTGTATGTGTCTTGTAGAACCCACGCTTGGAAATGCTGACAGCAGGCTTCAGGACAGCTGAGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388942.8
ENST00000484722.5
ENST00000561302.5
CDS CCA 90 bp AGGAGTCTCACTCCTACCTGGCCCTCCAATCCAAACTTTCAGAACTaGTGTCACTGCTTCCACTTGAGGCCAGTGGGGAGGGGCTGGATT +
Preference number: 5 (lower is better)
Translates to: RSLTPTWPSNPNFQN*CHCFHLRPVGRGWI
Trigger: AATCCAGCCCCTCCCCACTGGCCTCAAGTGGAAGCAGTGACACCAGTTCTGAAAGTTTGGATTGGAGGGCCAGGTAGGAGTGAGACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559079.5
CDS-3UTR CAA 90 bp AAGAAAACCCAGCCACGAGCACCACCCTCCCCTGAGCAGGGCGAGAAGAGGCGCGTTAGACCCTTCTCTTaGGTAATCTTCGTCCAGATT +
Preference number: 5 (lower is better)
Translates to: KKTQPRAPPSPEQGEKRRVRPFS*VIFVQI
Trigger: AATCTGGACGAAGATTACCAAAGAGAAGGGTCTAAC...GCGCCTCTTCTCGCCCTGCTCAGGGGAGGGTGGTGCTCGTGGCTGGGTTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CAA 90 bp TGGCTCTGGGACACCGCTGTCACTGCTGGGCCCATTGTAATACTGACTGATGTACTCCAGCTGCTCGTCTaGGATGACCTTGGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: WLWDTAVTAGPIVILTDVLQLLV*DDLGLL
Trigger: GAGAAGGCCAAGGTCATCCAAGACGAGCAGCTGGAG...TACATCAGTCAGTATTACAATGGGCCCAGCAGTGACAGCGGTGTCCCAGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CAA 90 bp ATAGGCTCAGATGGTGGTCTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCCCATTACCGCCGAGTTaGAGGGGCATGTCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: IGSDGGLRVIVLDSTQDSPLPPS*RGMSRE
Trigger: CTCTCTGGACATGCCCCTCAAACTCGGCGGTAATGG...GGAATCCTGGGTGGAGTCCAACACAATCACACGGAGACCACCATCTGAGCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CAA 90 bp TGGCAGGACGTAGGCATCAATGACCCTCTTCACCCTCCAGATCCGGAGCATGATCTCCGTGTGATTGTGTaGGACTCCACCCAGGATTCC +
Preference number: 5 (lower is better)
Translates to: WQDVGINDPLHPPDPEHDLRVIV*DSTQDS
Trigger: GGAATCCTGGGTGGAGTCCAACACAATCACACGGAG...ATCATGCTCCGGATCTGGAGGGTGAAGAGGGTCATTGATGCCTACGTCCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR CAA 90 bp CTGCGGGAGGCACTCTCCGAGGTGGCGCTGGTGCCATTACCGCCGAGTTTGAGGAAAACTAGATTCGTCTaGAAGAGACTCAGAAACGCT +
Preference number: 5 (lower is better)
Translates to: LREALSEVALVPLPPSLRKTRFV*KRLRNA
Trigger: AGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTTT...CCTCAAACTCGGCGGTAATGGCACCAGCGCCACCTCGGAGAGTGCCTCCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS-3UTR CAA 90 bp CCCAGGGGCTCCTGGGTCCATTGGCCACAGTGGATGCCACCATCGGAGCCAAAGCTGGAAACCTTCTCTTaGGTAATCTTCGTCCAGATT +
Preference number: 5 (lower is better)
Translates to: PRGSWVHWPQWMPPSEPKLETFS*VIFVQI
Trigger: AATCTGGACGAAGATTACCAAAGAGAAGGTTTCCAG...CTTTGGCTCCGATGGTGGCATCCACTGTGGCCAATGGACCCAGGAGCCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561302.5
CDS TCA 90 bp GCTTCCAACTGTCTGGGTCCTTGTAACTGCCCTGAAGTAGCCTCCTaGTGGGTGTTCTTACCGCTGGGCATCTTGCTTCAGGCACATCCT +
Preference number: 5 (lower is better)
Translates to: ASNCLGPCNCPEVAS*WVFLPLGILLQAHP
Trigger: AGGATGTGCCTGAAGCAAGATGCCCAGCGGTAAGAACACCCATCAGGAGGCTACTTCAGGGCAGTTACAAGGACCCAGACAGTTGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559079.5
CDS-3UTR CAA 90 bp TGGCAGGACGTAGGCATCAATGACCCTCTTCACCCTCCAGATCCGGAGCATGATCAGCCATGGGTTTTCTaGGTGTTTAGTGGGGCTCAG +
Preference number: 5 (lower is better)
Translates to: WQDVGINDPLHPPDPEHDQPWVF*VFSGAQ
Trigger: CTGAGCCCCACTAAACACCAAGAAAACCCATGGCTG...ATCATGCTCCGGATCTGGAGGGTGAAGAGGGTCATTGATGCCTACGTCCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484722.5
ENST00000561302.5
CDS TCA 90 bp CCACAGCCATGGGTTTTCTTGGTGTTTAGTGGGGCTCAGCTGTCCTaGAGCCTGCTGTCAGCATTTCCAAGCGTGGGTTCTACAAGACAC +
Preference number: 5 (lower is better)
Translates to: PQPWVFLVFSGAQLS*SLLSAFPSVGSTRH
Trigger: GTGTCTTGTAGAACCCACGCTTGGAAATGCTGACAGCAGGCTTCAGGACAGCTGAGCCCCACTAAACACCAAGAAAACCCATGGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388942.8
ENST00000484722.5
ENST00000561302.5
CDS TCA 90 bp ACAGTCTCTGAGAAGAACACGGACAGAATGACCAGGCTGATCCAGTaGATCACGCCAGCAAACTGGAATGCGCTGGAAACTGCCACACGG +
Preference number: 5 (lower is better)
Translates to: TVSEKNTDRMTRLIQ*ITPANWNALETATR
Trigger: CCGTGTGGCAGTTTCCAGCGCATTCCAGTTTGCTGGCGTGATTCACTGGATCAGCCTGGTCATTCTGTCCGTGTTCTTCTCAGAGACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS TCA 90 bp GGAGCCCTGGGTGCAAATTCAGTTCTAGCTCTTCGCCCAGATGTGTaGCCCCAAGGGGTGCTCGACAACATGAAAGCCTCTTTCAGAACA +
Preference number: 5 (lower is better)
Translates to: GALGANSVLALRPDV*PQGVLDNMKASFRT
Trigger: TGTTCTGAAAGAGGCTTTCATGTTGTCGAGCACCCCTTGGGGTCACACATCTGGGCGAAGAGCTAGAACTGAATTTGCACCCAGGGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558249.1
CDS GCA 90 bp CAGGCTACCAGGAAACTGTTGAGACTTGCACTGAGCAAAAATACCTaGCACACGGCTGCTCTCTTCCCACAGCACGGCTTCAGCCAGTTA +
Preference number: 5 (lower is better)
Translates to: QATRKLLRLALSKNT*HTAALFPQHGFSQL
Trigger: TAACTGGCTGAAGCCGTGCTGTGGGAAGAGAGCAGCCGTGTGGCAGGTATTTTTGCTCAGTGCAAGTCTCAACAGTTTCCTGGTAGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388942.8
CDS GCA 90 bp ATAATCCATCAGACTCAAAGGACAGCTCTCGACAAGTCAATGCTGTaGTGGGGACAGCTGGGTGGAGGTGCCATCTGCAGCAGATGTGCA +
Preference number: 5 (lower is better)
Translates to: IIHQTQRTALDKSML*WGQLGGGAICSRCA
Trigger: TGCACATCTGCTGCAGATGGCACCTCCACCCAGCTGTCCCCAGCACAGCATTGACTTGTCGAGAGCTGTCCTTTGAGTCTGATGGATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559079.5
CDS-3UTR CAA 90 bp GTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGGGTGGGATGGCAGGCTGTGGATaGGTCATGTTGAAAGATGGA +
Preference number: 5 (lower is better)
Translates to: VIVLDSTQDSWERRLRGGMAGCG*VMLKDG
Trigger: TCCATCTTTCAACATGACCAATCCACAGCCTGCCAT...CCCACCCCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CAA 90 bp CTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCTGGGAAAGACGGCTTAGGCCACCCACCTCTAGGTaGATCCCTTTATATCCTGTG +
Preference number: 5 (lower is better)
Translates to: LRVIVLDSTQDSWERRLRPPTSR*IPLYPV
Trigger: CACAGGATATAAAGGGATCAACCTAGAGGTGGGTGG...CCTAAGCCGTCTTTCCCAGGAATCCTGGGTGGAGTCCAACACAATCACACGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CAA 90 bp CTGGTGAATGTCTATTGCGGCCGTGGTGACCATACACACAGCTGGCTCTGGGACTACACAGTAATATGGTaGAGGCCACGTGCAATCCCA +
Preference number: 5 (lower is better)
Translates to: LVNVYCGRGDHTHSWLWDYTVIW*RPRAIP
Trigger: TGGGATTGCACGTGGCCTCAACCATATTACTGTGTA...GTCCCAGAGCCAGCTGTGTGTATGGTCACCACGGCCGCAATAGACATTCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561302.5
CDS GCA 90 bp GAAACTGTTGAGACTTGCACTGAGCAAAAATACCTGCCACACGGCTaGTCTCTTCCCACAGCACGGCTTCAGCCAGTTAGACCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: ETVETCTEQKYLPHG*SLPTARLQPVRPFS
Trigger: AGAGAAGGGTCTAACTGGCTGAAGCCGTGCTGTGGGAAGAGAGCAGCCGTGTGGCAGGTATTTTTGCTCAGTGCAAGTCTCAACAGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388942.8
CDS TCA 90 bp ACAGTCTCTGAGAAGAACACGGACAGAATGACCAGGCTGATCCAGTaGATCACGCCAGCAAACTGGAATGCGCTGGAAAACTGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: TVSEKNTDRMTRLIQ*ITPANWNALENWRS
Trigger: GCTTCTCCAGTTTTCCAGCGCATTCCAGTTTGCTGGCGTGATTCACTGGATCAGCCTGGTCATTCTGTCCGTGTTCTTCTCAGAGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388942.8
CDS GCA 90 bp TTCCACTTGAGGCCAGTGGGGAGGGGCTGGATTTCCTCTCTCTCTTaGCCACTTCAACGGTACCTCTCCCAGACTATGAATCATAGTTTA +
Preference number: 5 (lower is better)
Translates to: FHLRPVGRGWISSLS*PLQRYLSQTMNHSL
Trigger: TAAACTATGATTCATAGTCTGGGAGAGGTACCGTTGAAGTGGGCAAGAGAGAGAGGAAATCCAGCCCCTCCCCACTGGCCTCAAGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559079.5
CDS CCA 90 bp TGGATTGGTCATGTTGAAAGATGGAGCCACAGCCATGGGTTTTCTTaGTGTTTAGTGGGGCTCAGCTGTCCTGAAGCCTGCTGTCAGCAT +
Preference number: 5 (lower is better)
Translates to: WIGHVERWSHSHGFS*CLVGLSCPEACCQH
Trigger: ATGCTGACAGCAGGCTTCAGGACAGCTGAGCCCCACTAAACACCAAGAAAACCCATGGCTGTGGCTCCATCTTTCAACATGACCAATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388942.8
ENST00000484722.5
ENST00000561302.5
CDS CCA 90 bp CTTCTTTCACTTGCACTTCAGGTCTGCTACCTGCTGAGGTCTTTCTaGTTCCAACTTGGGGCTCATTCCACTGTGCCTTTGATCCCAGGA +
Preference number: 5 (lower is better)
Translates to: LLSLALQVCYLLRSF*FQLGAHSTVPLIPG
Trigger: TCCTGGGATCAAAGGCACAGTGGAATGAGCCCCAAGTTGGAACCAGAAAGACCTCAGCAGGTAGCAGACCTGAAGTGCAAGTGAAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559079.5
CDS-3UTR CAA 90 bp ATAGGCTCAGATGGTGGTCTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCGCTACCAGGAAACTGTaGAGACTTGCACTGAGCAAA +
Preference number: 5 (lower is better)
Translates to: IGSDGGLRVIVLDSTQDSATRKL*RLALSK
Trigger: TTTGCTCAGTGCAAGTCTCAACAGTTTCCTGGTAGC...GGAATCCTGGGTGGAGTCCAACACAATCACACGGAGACCACCATCTGAGCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388942.8
CDS-3UTR CAA 90 bp CCACCCACCTCTAGGTTGATCCCTTTATATCCTGTGAAGGTGAAAACTAGATTCGGTCCCAGGAGAGCTTaGAGATGGCTGTCTCCCCTC +
Preference number: 5 (lower is better)
Translates to: PPTSRLIPLYPVKVKTRFGPRRA*RWLSPL
Trigger: GAGGGGAGACAGCCATCTCAAAGCTCTCCTGGGACC...GAATCTAGTTTTCACCTTCACAGGATATAAAGGGATCAACCTAGAGGTGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS TCA 90 bp ACAGTCTCTGAGAAGAACACGGACAGAATGACCAGGCTGATCCAGTaGATCACGCCAGCAAACTGGAATGCGCTGGAAACCTTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: TVSEKNTDRMTRLIQ*ITPANWNALETFSL
Trigger: CAAAGAGAAGGTTTCCAGCGCATTCCAGTTTGCTGGCGTGATTCACTGGATCAGCCTGGTCATTCTGTCCGTGTTCTTCTCAGAGACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561302.5
CDS TCA 90 bp TCTAAGATTGGCTTCTTTCACTTGCACTTCAGGTCTGCTACCTGCTaGGGTCTTTCTGGTTCCAACTTGGGGCTCATTCCACTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: SKIGFFHLHFRSATC*GLSGSNLGLIPLCL
Trigger: AAGGCACAGTGGAATGAGCCCCAAGTTGGAACCAGAAAGACCTCAGCAGGTAGCAGACCTGAAGTGCAAGTGAAAGAAGCCAATCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559079.5
CDS GCA 90 bp CATGGGTTTTCTTGGTGTTTAGTGGGGCTCAGCTGTCCTGAAGCCTaGTGTCAGCATTTCCAAGCGTGGGTTCTACAAGACACATACAAA +
Preference number: 5 (lower is better)
Translates to: HGFSWCLVGLSCPEA*CQHFQAWVLQDTYK
Trigger: TTTGTATGTGTCTTGTAGAACCCACGCTTGGAAATGCTGACAGCAGGCTTCAGGACAGCTGAGCCCCACTAAACACCAAGAAAACCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388942.8
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CAA 90 bp ATAGGCTCAGATGGTGGTCTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCTTCTTCGTCTACTTGTaGGGAGATGATCTCAACTTC +
Preference number: 5 (lower is better)
Translates to: IGSDGGLRVIVLDSTQDSFFVYL*GDDLNF
Trigger: GAAGTTGAGATCATCTCCCAACAAGTAGACGAAGAA...GGAATCCTGGGTGGAGTCCAACACAATCACACGGAGACCACCATCTGAGCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CAA 90 bp CCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTAATCTTCGTCCAGATTaGACAGGAGCTGCGAGCCCG +
Preference number: 5 (lower is better)
Translates to: PVKVKTRFVLKRLRNAHANLRPD*TGAASP
Trigger: CGGGCTCGCAGCTCCTGTCAAATCTGGACGAAGATT...AGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS GCA 90 bp AATCACCACCAATATTACACAGGCTACCAGGAAACTGTTGAGACTTaGACTGAGCAAAAATACCTGCCACACGGCTGCTCTCTTCCCACA +
Preference number: 5 (lower is better)
Translates to: NHHQYYTGYQETVET*TEQKYLPHGCSLPT
Trigger: TGTGGGAAGAGAGCAGCCGTGTGGCAGGTATTTTTGCTCAGTGCAAGTCTCAACAGTTTCCTGGTAGCCTGTGTAATATTGGTGGTGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388942.8
CDS CCA 90 bp ACCAGCTGCACAGGAGCAATGCTCTTGGTTTCTTCGTCTACTTGTTaGGAGATGATCTCAACTTCAGAAATTCCTCCTTCTATGGCAGGC +
Preference number: 5 (lower is better)
Translates to: TSCTGAMLLVSSSTC*EMISTSEIPPSMAG
Trigger: GCCTGCCATAGAAGGAGGAATTTCTGAAGTTGAGATCATCTCCCAACAAGTAGACGAAGAAACCAAGAGCATTGCTCCTGTGCAGCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388942.8
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CAA 90 bp CCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTCAGCCATGGGTTTTCTaGGTGTTTAGTGGGGCTCAG +
Preference number: 5 (lower is better)
Translates to: PVKVKTRFVLKRLRNAHAQPWVF*VFSGAQ
Trigger: CTGAGCCCCACTAAACACCAAGAAAACCCATGGCTG...AGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CAA 90 bp ATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGACAAAAATCTTCGTCCAGATTaGACAGGAGCTGCGAGCCCG +
Preference number: 5 (lower is better)
Translates to: IRLEETQKRSCWNENEDKNLRPD*TGAASP
Trigger: CGGGCTCGCAGCTCCTGTCAAATCTGGACGAAGATT...TTTGTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTTCAAGACGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CAA 90 bp ATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGGAATGAGAATGAGGACAAACCGGATCTCAAACCCTaGCTCCTGACAGATCTGCGT +
Preference number: 5 (lower is better)
Translates to: IRLEETQKRSCWNENEDKPDLKP*LLTDLR
Trigger: ACGCAGATCTGTCAGGAGCAAGGGTTTGAGATCCGG...TTTGTCCTCATTCTCATTCCAGCATGAGCGTTTCTGAGTCTCTTCAAGACGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CAA 90 bp ATCCCTTTATATCCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGACGCCAGCTCTGGGCTTaGAGGTCTGAAGCTTGTGGC +
Preference number: 5 (lower is better)
Translates to: IPLYPVKVKTRFVLKRLRRQLWA*RSEACG
Trigger: GCCACAAGCTTCAGACCTCAAAGCCCAGAGCTGGCG...TCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGGATATAAAGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CAA 90 bp ATAGGCTCAGATGGTGGTCTCCGTGTGATTGTGTTGGACTCCACCCAGGATTCCAAAACTAGATTCGTCTaGAAGAGACTCAGAAACGCT +
Preference number: 5 (lower is better)
Translates to: IGSDGGLRVIVLDSTQDSKTRFV*KRLRNA
Trigger: AGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTTT...GGAATCCTGGGTGGAGTCCAACACAATCACACGGAGACCACCATCTGAGCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS TCA 90 bp GCACAGGAGCAATGCTCTTGGTTTCTTCGTCTACTTGTTGGGAGATaGTCTCAACTTCAGAAATTCCTCCTTCTATGGCAGGCTGTGGAT +
Preference number: 5 (lower is better)
Translates to: AQEQCSWFLRLLVGR*SQLQKFLLLWQAVD
Trigger: ATCCACAGCCTGCCATAGAAGGAGGAATTTCTGAAGTTGAGATCATCTCCCAACAAGTAGACGAAGAAACCAAGAGCATTGCTCCTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388942.8
ENST00000484722.5
ENST00000561302.5
CDS-3UTR CAA 90 bp TCAGTGCAGCTGGTTTTTATTATTAAAGCCAAGGTTGGAAAATGGTTGTTCCCCTCGTCTTGGATGACCTaGGCCTTCTCGTACTGCTGG +
Preference number: 5 (lower is better)
Translates to: SVQLVFIIKAKVGKWLFPSSWMT*AFSYCW
Trigger: CCAGCAGTACGAGAAGGCCAAGGTCATCCAAGACGA...GGGGAACAACCATTTTCCAACCTTGGCTTTAATAATAAAAACCAGCTGCACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS-3UTR CAA 90 bp CCTGTGAAGGTGAAAACTAGATTCGTCTTGAAGAGACTCAGAAACGCTCATGCTGTTAGACCCTTCTCTTaGGTAATCTTCGTCCAGATT +
Preference number: 5 (lower is better)
Translates to: PVKVKTRFVLKRLRNAHAVRPFS*VIFVQI
Trigger: AATCTGGACGAAGATTACCAAAGAGAAGGGTCTAAC...AGCATGAGCGTTTCTGAGTCTCTTCAAGACGAATCTAGTTTTCACCTTCACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS TCA 72 bp GCCGGATCTCAAACTGCGGAGGGAGACGGGCAAGGCTaGATCAGCGGCGAGGGGCCGGCGGGGGCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: AGSQTAEGDGQG*ISGEGPAGASS
Trigger: GCTGGAGGCCCCCGCCGGCCCCTCGCCGCTGATTCAGCCTTGCCCGTCTCCCTCCGCAGTTTGAGATCCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558249.1
CDS GCA 72 bp AGGTCCAGGTCCTGCTGCGCCAGGTGCGCGCGCAGCTaGCGGATCTCAAACTGCGGAGGGAGACGGGCAAGG +
Preference number: 6 (lower is better)
Translates to: RSRSCCARCARS*RISNCGGRRAR
Trigger: CCTTGCCCGTCTCCCTCCGCAGTTTGAGATCCGGCAGCTGCGCGCGCACCTGGCGCAGCAGGACCTGGACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558249.1
CDS TCA 72 bp GGTGGGGAGGACTGGGCTGAGCCTCCCGCAGCTGGATaGTTCCTTAGGAATCTCCCAGCATCGCGGTTCGCA +
Preference number: 6 (lower is better)
Translates to: GGEDWAEPPAAG*FLRNLPASRFA
Trigger: TGCGAACCGCGATGCTGGGAGATTCCTAAGGAATCATCCAGCTGCGGGAGGCTCAGCCCAGTCCTCCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558249.1
CDS CCA 72 bp CTTCGTCCAGATTTGACAGGAGCTGCGAGCCCGCCGTaGAGAGATCGACAGCAGCCAGGGGCAAGTCCCGAT +
Preference number: 6 (lower is better)
Translates to: LRPDLTGAASPP*RDRQQPGASPD
Trigger: ATCGGGACTTGCCCCTGGCTGCTGTCGATCTCTCCACGGCGGGCTCGCAGCTCCTGTCAAATCTGGACGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388942.8
ENST00000484722.5
ENST00000561302.5
CDS CCA 72 bp ACCTGTGCGATCCTGCGTCTCAGGTGCCTTGCAGTCTaGCCCCCATCTCACGGATGCCCGGGAGAGGAAACA +
Preference number: 6 (lower is better)
Translates to: TCAILRLRCLAV*PPSHGCPGEET
Trigger: TGTTTCCTCTCCCGGGCATCCGTGAGATGGGGGCCAGACTGCAAGGCACCTGAGACGCAGGATCGCACAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558249.1
CDS CAA 90 bp TTGCGGAGCCTTTTCCAACCTGTGCGATCCTGCGTCTCAGGTGCCTaGCAGTCTGGCCCCCATCTCACGGATGCCCGGGAGAGGAAACAC +
Preference number: 6 (lower is better)
Translates to: LRSLFQPVRSCVSGA*QSGPHLTDARERKH
Trigger: GTGTTTCCTCTCCCGGGCATCCGTGAGATGGGGGCCAGACTGCAAGGCACCTGAGACGCAGGATCGCACAGGTTGGAAAAGGCTCCGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558249.1
CDS GCA 72 bp TTTTCCAACCTGTGCGATCCTGCGTCTCAGGTGCCTTaGAGTCTGGCCCCCATCTCACGGATGCCCGGGAGA +
Preference number: 6 (lower is better)
Translates to: FSNLCDPASQVP*SLAPISRMPGR
Trigger: TCTCCCGGGCATCCGTGAGATGGGGGCCAGACTGCAAGGCACCTGAGACGCAGGATCGCACAGGTTGGAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558249.1
CDS GCA 72 bp TTACGGTTGCGGAGCCTTTTCCAACCTGTGCGATCCTaGGTCTCAGGTGCCTTGCAGTCTGGCCCCCATCTC +
Preference number: 6 (lower is better)
Translates to: LRLRSLFQPVRS*VSGALQSGPHL
Trigger: GAGATGGGGGCCAGACTGCAAGGCACCTGAGACGCAGGATCGCACAGGTTGGAAAAGGCTCCGCAACCGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558249.1
CDS GCA 72 bp CTCAGGTGCCTTGCAGTCTGGCCCCCATCTCACGGATaGCCGGGAGAGGAAACACAACGTGTTTCCTTTGTG +
Preference number: 6 (lower is better)
Translates to: LRCLAVWPPSHG*PGEETQRVSFV
Trigger: CACAAAGGAAACACGTTGTGTTTCCTCTCCCGGGCATCCGTGAGATGGGGGCCAGACTGCAAGGCACCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558249.1
CDS GCA 72 bp AGAGCTTCTTACGGTTGCGGAGCCTTTTCCAACCTGTaGGATCCTGCGTCTCAGGTGCCTTGCAGTCTGGCC +
Preference number: 6 (lower is better)
Translates to: RASYGCGAFSNL*DPASQVPCSLA
Trigger: GGCCAGACTGCAAGGCACCTGAGACGCAGGATCGCACAGGTTGGAAAAGGCTCCGCAACCGTAAGAAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558249.1
CDS GCA 72 bp CTCCCAGCATCGCGGTTCGCAAGAGCTTCTTACGGTTaGGGAGCCTTTTCCAACCTGTGCGATCCTGCGTCT +
Preference number: 6 (lower is better)
Translates to: LPASRFARASYG*GAFSNLCDPAS
Trigger: AGACGCAGGATCGCACAGGTTGGAAAAGGCTCCGCAACCGTAAGAAGCTCTTGCGAACCGCGATGCTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558249.1
CDS CAA 72 bp TCTCCCAGCATCGCGGTTCGCAAGAGCTTCTTACGGTaGCGGAGCCTTTTCCAACCTGTGCGATCCTGCGTC +
Preference number: 6 (lower is better)
Translates to: SPSIAVRKSFLR*RSLFQPVRSCV
Trigger: GACGCAGGATCGCACAGGTTGGAAAAGGCTCCGCAACCGTAAGAAGCTCTTGCGAACCGCGATGCTGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558249.1
CDS CCA 72 bp TGTCACTGCTTCCACTTGAGGCCAGTGGGGAGGGGCTaGATTTCCTCTCTCTCTTGCCCACTTCAACGGTAC +
Preference number: 6 (lower is better)
Translates to: CHCFHLRPVGRG*ISSLSCPLQRY
Trigger: GTACCGTTGAAGTGGGCAAGAGAGAGAGGAAATCCAGCCCCTCCCCACTGGCCTCAAGTGGAAGCAGTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559079.5
CDS CAA 72 bp GAGGCCAGTGGGGAGGGGCTGGATTTCCTCTCTCTCTaGCCCACTTCAACGGTACCTCTCCCAGACTATGAA +
Preference number: 6 (lower is better)
Translates to: EASGEGLDFLSL*PTSTVPLPDYE
Trigger: TTCATAGTCTGGGAGAGGTACCGTTGAAGTGGGCAAGAGAGAGAGGAAATCCAGCCCCTCCCCACTGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559079.5
CDS CAA 90 bp CTGGAATGCGCTGGAAACCTTCTCTTTGGTAATCTTCGTCCAGATTaGACAGGAGCTGCGAGCCCGCCGTGGAGAGATCGACAGCAGCCA +
Preference number: 6 (lower is better)
Translates to: LECAGNLLFGNLRPD*TGAASPPWRDRQQP
Trigger: TGGCTGCTGTCGATCTCTCCACGGCGGGCTCGCAGCTCCTGTCAAATCTGGACGAAGATTACCAAAGAGAAGGTTTCCAGCGCATTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561302.5
CDS GCA 72 bp AGGCCAGTGGGGAGGGGCTGGATTTCCTCTCTCTCTTaGCCACTTCAACGGTACCTCTCCCAGACTATGAAT +
Preference number: 6 (lower is better)
Translates to: RPVGRGWISSLS*PLQRYLSQTMN
Trigger: ATTCATAGTCTGGGAGAGGTACCGTTGAAGTGGGCAAGAGAGAGAGGAAATCCAGCCCCTCCCCACTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559079.5
CDS GCA 72 bp TGGCCCTCCAATCCAAACTTTCAGAACTGGTGTCACTaGTTCCACTTGAGGCCAGTGGGGAGGGGCTGGATT +
Preference number: 6 (lower is better)
Translates to: WPSNPNFQNWCH*FHLRPVGRGWI
Trigger: AATCCAGCCCCTCCCCACTGGCCTCAAGTGGAAGCAGTGACACCAGTTCTGAAAGTTTGGATTGGAGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559079.5
CDS CCA 72 bp ACTCCTACCTGGCCCTCCAATCCAAACTTTCAGAACTaGTGTCACTGCTTCCACTTGAGGCCAGTGGGGAGG +
Preference number: 6 (lower is better)
Translates to: TPTWPSNPNFQN*CHCFHLRPVGR
Trigger: CCTCCCCACTGGCCTCAAGTGGAAGCAGTGACACCAGTTCTGAAAGTTTGGATTGGAGGGCCAGGTAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559079.5
CDS TCA 72 bp GTTAGACCCTTCTCTTTGGTAATCTTCGTCCAGATTTaGCAGGAGCTGCGAGCCCGCCGTGGAGAGATCGAC +
Preference number: 6 (lower is better)
Translates to: VRPFSLVIFVQI*QELRARRGEID
Trigger: GTCGATCTCTCCACGGCGGGCTCGCAGCTCCTGTCAAATCTGGACGAAGATTACCAAAGAGAAGGGTCTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388942.8
ENST00000484722.5
CDS TCA 72 bp TGTCTGGGTCCTTGTAACTGCCCTGAAGTAGCCTCCTaGTGGGTGTTCTTACCGCTGGGCATCTTGCTTCAG +
Preference number: 6 (lower is better)
Translates to: CLGPCNCPEVAS*WVFLPLGILLQ
Trigger: CTGAAGCAAGATGCCCAGCGGTAAGAACACCCATCAGGAGGCTACTTCAGGGCAGTTACAAGGACCCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559079.5
CDS TCA 72 bp GCCCAGATGTGTGACCCCAAGGGGTGCTCGACAACATaGAAGCCTCTTTCAGAACAGGAAACCTCAGGACAC +
Preference number: 6 (lower is better)
Translates to: AQMCDPKGCSTT*KPLSEQETSGH
Trigger: GTGTCCTGAGGTTTCCTGTTCTGAAAGAGGCTTTCATGTTGTCGAGCACCCCTTGGGGTCACACATCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558249.1
CDS TCA 72 bp CTGGAAACCTTCTCTTTGGTAATCTTCGTCCAGATTTaGCAGGAGCTGCGAGCCCGCCGTGGAGAGATCGAC +
Preference number: 6 (lower is better)
Translates to: LETFSLVIFVQI*QELRARRGEID
Trigger: GTCGATCTCTCCACGGCGGGCTCGCAGCTCCTGTCAAATCTGGACGAAGATTACCAAAGAGAAGGTTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561302.5
CDS GCA 72 bp GAGACTTGCACTGAGCAAAAATACCTGCCACACGGCTaGTCTCTTCCCACAGCACGGCTTCAGCCAGTTAGA +
Preference number: 6 (lower is better)
Translates to: ETCTEQKYLPHG*SLPTARLQPVR
Trigger: TCTAACTGGCTGAAGCCGTGCTGTGGGAAGAGAGCAGCCGTGTGGCAGGTATTTTTGCTCAGTGCAAGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388942.8
CDS CAA 72 bp GCTGGAAACCTTCTCTTTGGTAATCTTCGTCCAGATTaGACAGGAGCTGCGAGCCCGCCGTGGAGAGATCGA +
Preference number: 6 (lower is better)
Translates to: AGNLLFGNLRPD*TGAASPPWRDR
Trigger: TCGATCTCTCCACGGCGGGCTCGCAGCTCCTGTCAAATCTGGACGAAGATTACCAAAGAGAAGGTTTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561302.5
CDS TCA 72 bp TGGGTTTTCTTGGTGTTTAGTGGGGCTCAGCTGTCCTaGAGCCTGCTGTCAGCATTTCCAAGCGTGGGTTCT +
Preference number: 6 (lower is better)
Translates to: WVFLVFSGAQLS*SLLSAFPSVGS
Trigger: AGAACCCACGCTTGGAAATGCTGACAGCAGGCTTCAGGACAGCTGAGCCCCACTAAACACCAAGAAAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388942.8
ENST00000484722.5
ENST00000561302.5
CDS TCA 72 bp GGTGCAAATTCAGTTCTAGCTCTTCGCCCAGATGTGTaGCCCCAAGGGGTGCTCGACAACATGAAAGCCTCT +
Preference number: 6 (lower is better)
Translates to: GANSVLALRPDV*PQGVLDNMKAS
Trigger: AGAGGCTTTCATGTTGTCGAGCACCCCTTGGGGTCACACATCTGGGCGAAGAGCTAGAACTGAATTTGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558249.1
CDS TCA 72 bp GAGAAGAACACGGACAGAATGACCAGGCTGATCCAGTaGATCACGCCAGCAAACTGGAATGCGCTGGAAACC +
Preference number: 6 (lower is better)
Translates to: EKNTDRMTRLIQ*ITPANWNALET
Trigger: GGTTTCCAGCGCATTCCAGTTTGCTGGCGTGATTCACTGGATCAGCCTGGTCATTCTGTCCGTGTTCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561302.5
CDS GCA 72 bp AGGAAACTGTTGAGACTTGCACTGAGCAAAAATACCTaGCACACGGCTGCTCTCTTCCCACAGCACGGCTTC +
Preference number: 6 (lower is better)
Translates to: RKLLRLALSKNT*HTAALFPQHGF
Trigger: GAAGCCGTGCTGTGGGAAGAGAGCAGCCGTGTGGCAGGTATTTTTGCTCAGTGCAAGTCTCAACAGTTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388942.8
CDS GCA 72 bp TGCCACCTGGTGACTCTTCTGAAGCGCAGTGTGATCTaGTTATTCCCTGACTCAAACCTGCAGAGGTGCCTA +
Preference number: 6 (lower is better)
Translates to: CHLVTLLKRSVI*LFPDSNLQRCL
Trigger: TAGGCACCTCTGCAGGTTTGAGTCAGGGAATAAGCAGATCACACTGCGCTTCAGAAGAGTCACCAGGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559079.5
CDS GCA 72 bp GTACCTAAGAGAAGTACTGATAAAGGGCCGTGGGAGTaGAGACGCAGAAGAGACAGCTTCCAACTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: VPKRSTDKGPWE*RRRRDSFQLSG
Trigger: CCCAGACAGTTGGAAGCTGTCTCTTCTGCGTCTGCACTCCCACGGCCCTTTATCAGTACTTCTCTTAGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559079.5
CDS CCA 72 bp CATGTTGAAAGATGGAGCCACAGCCATGGGTTTTCTTaGTGTTTAGTGGGGCTCAGCTGTCCTGAAGCCTGC +
Preference number: 6 (lower is better)
Translates to: HVERWSHSHGFS*CLVGLSCPEAC
Trigger: GCAGGCTTCAGGACAGCTGAGCCCCACTAAACACCAAGAAAACCCATGGCTGTGGCTCCATCTTTCAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388942.8
ENST00000484722.5
ENST00000561302.5
CDS CAA 72 bp AATCCAAACTTTCAGAACTGGTGTCACTGCTTCCACTaGAGGCCAGTGGGGAGGGGCTGGATTTCCTCTCTC +
Preference number: 6 (lower is better)
Translates to: NPNFQNWCHCFH*RPVGRGWISSL
Trigger: GAGAGAGGAAATCCAGCCCCTCCCCACTGGCCTCAAGTGGAAGCAGTGACACCAGTTCTGAAAGTTTGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559079.5
CDS TCA 72 bp GAGAAGAACACGGACAGAATGACCAGGCTGATCCAGTaGATCACGCCAGCAAACTGGAATGCGCTGGAAAAC +
Preference number: 6 (lower is better)
Translates to: EKNTDRMTRLIQ*ITPANWNALEN
Trigger: GTTTTCCAGCGCATTCCAGTTTGCTGGCGTGATTCACTGGATCAGCCTGGTCATTCTGTCCGTGTTCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388942.8
CDS TCA 72 bp GAGAAGAACACGGACAGAATGACCAGGCTGATCCAGTaGATCACGCCAGCAAACTGGAATGCGCTGGAAACT +
Preference number: 6 (lower is better)
Translates to: EKNTDRMTRLIQ*ITPANWNALET
Trigger: AGTTTCCAGCGCATTCCAGTTTGCTGGCGTGATTCACTGGATCAGCCTGGTCATTCTGTCCGTGTTCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484722.5
CDS TCA 72 bp GGCTTCATCGTGTTAGCTAGGATGGTTTCGATCTCCTaGCCTTGTGATCTGCTCACCTCAGCCTCCCAAAGT +
Preference number: 6 (lower is better)
Translates to: GFIVLARMVSIS*PCDLLTSASQS
Trigger: ACTTTGGGAGGCTGAGGTGAGCAGATCACAAGGTCAGGAGATCGAAACCATCCTAGCTAACACGATGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559079.5
CDS GCA 72 bp GCTTATTCCCTGACTCAAACCTGCAGAGGTGCCTACTaGTTACTGAACATGCTCTCAATTCCTTGGCCAGGA +
Preference number: 6 (lower is better)
Translates to: AYSLTQTCRGAY*LLNMLSIPWPG
Trigger: TCCTGGCCAAGGAATTGAGAGCATGTTCAGTAAGCAGTAGGCACCTCTGCAGGTTTGAGTCAGGGAATAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559079.5
CDS CAA 90 bp GTCAGGAGAATCACCACCAATATTACACAGGCTACCAGGAAACTGTaGAGACTTGCACTGAGCAAAAATACCTGCCACACGGCTGCTCTC +
Preference number: 6 (lower is better)
Translates to: VRRITTNITQATRKL*RLALSKNTCHTAAL
Trigger: GAGAGCAGCCGTGTGGCAGGTATTTTTGCTCAGTGCAAGTCTCAACAGTTTCCTGGTAGCCTGTGTAATATTGGTGGTGATTCTCCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388942.8
CDS CCA 72 bp AGCTGTCCTGAAGCCTGCTGTCAGCATTTCCAAGCGTaGGTTCTACAAGACACATACAAATATAGTGCCCTG +
Preference number: 6 (lower is better)
Translates to: SCPEACCQHFQA*VLQDTYKYSAL
Trigger: CAGGGCACTATATTTGTATGTGTCTTGTAGAACCCACGCTTGGAAATGCTGACAGCAGGCTTCAGGACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388942.8
ENST00000484722.5
ENST00000561302.5
CDS CAA 90 bp GTTCACCAGCTGCACAGGAGCAATGCTCTTGGTTTCTTCGTCTACTaGTTGGGAGATGATCTCAACTTCAGAAATTCCTCCTTCTATGGC +
Preference number: 6 (lower is better)
Translates to: VHQLHRSNALGFFVY*LGDDLNFRNSSFYG
Trigger: GCCATAGAAGGAGGAATTTCTGAAGTTGAGATCATCTCCCAACAAGTAGACGAAGAAACCAAGAGCATTGCTCCTGTGCAGCTGGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388942.8
ENST00000484722.5
ENST00000561302.5
CDS GCA 72 bp CAATATTACACAGGCTACCAGGAAACTGTTGAGACTTaGACTGAGCAAAAATACCTGCCACACGGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: QYYTGYQETVET*TEQKYLPHGCS
Trigger: AGAGCAGCCGTGTGGCAGGTATTTTTGCTCAGTGCAAGTCTCAACAGTTTCCTGGTAGCCTGTGTAATATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388942.8
CDS GCA 72 bp AGCCTTTTAAGCCATTCCTTATCCTTCTCTACACTGTaGTCCAGCCACCTATCTGTTCCTAGTGCATGTGCA +
Preference number: 6 (lower is better)
Translates to: SLLSHSLSFSTL*SSHLSVPSACA
Trigger: TGCACATGCACTAGGAACAGATAGGTGGCTGGAGCACAGTGTAGAGAAGGATAAGGAATGGCTTAAAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559079.5
CDS GCA 72 bp GTGATCTGCTTATTCCCTGACTCAAACCTGCAGAGGTaGCTACTGCTTACTGAACATGCTCTCAATTCCTTG +
Preference number: 6 (lower is better)
Translates to: VICLFPDSNLQR*LLLTEHALNSL
Trigger: CAAGGAATTGAGAGCATGTTCAGTAAGCAGTAGGCACCTCTGCAGGTTTGAGTCAGGGAATAAGCAGATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559079.5
CDS CAA 72 bp CTGCACAGGAGCAATGCTCTTGGTTTCTTCGTCTACTaGTTGGGAGATGATCTCAACTTCAGAAATTCCTCC +
Preference number: 6 (lower is better)
Translates to: LHRSNALGFFVY*LGDDLNFRNSS
Trigger: GGAGGAATTTCTGAAGTTGAGATCATCTCCCAACAAGTAGACGAAGAAACCAAGAGCATTGCTCCTGTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388942.8
ENST00000484722.5
ENST00000561302.5
CDS CAA 72 bp ATCACCACCAATATTACACAGGCTACCAGGAAACTGTaGAGACTTGCACTGAGCAAAAATACCTGCCACACG +
Preference number: 6 (lower is better)
Translates to: ITTNITQATRKL*RLALSKNTCHT
Trigger: CGTGTGGCAGGTATTTTTGCTCAGTGCAAGTCTCAACAGTTTCCTGGTAGCCTGTGTAATATTGGTGGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388942.8
CDS TCA 72 bp CAATGCTCTTGGTTTCTTCGTCTACTTGTTGGGAGATaGTCTCAACTTCAGAAATTCCTCCTTCTATGGCAG +
Preference number: 6 (lower is better)
Translates to: QCSWFLRLLVGR*SQLQKFLLLWQ
Trigger: CTGCCATAGAAGGAGGAATTTCTGAAGTTGAGATCATCTCCCAACAAGTAGACGAAGAAACCAAGAGCATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388942.8
ENST00000484722.5
ENST00000561302.5
CDS CCA 72 bp ACAGGAGCAATGCTCTTGGTTTCTTCGTCTACTTGTTaGGAGATGATCTCAACTTCAGAAATTCCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: TGAMLLVSSSTC*EMISTSEIPPS
Trigger: AGAAGGAGGAATTTCTGAAGTTGAGATCATCTCCCAACAAGTAGACGAAGAAACCAAGAGCATTGCTCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388942.8
ENST00000484722.5
ENST00000561302.5