RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM255A (Homo sapiens)

Ensembl gene IDs: ENSG00000125355

Ensembl transcript IDs: ENST00000309720.9, ENST00000371352.5, ENST00000371369.9, ENST00000440464.5, ENST00000480821.1, ENST00000519908.1

Found 328 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACATTTACTGTTAATGAGAGAGTGCACTTCTTGTGCCTTGATTCTTaGTGGCTAAGTGTCTACAAGGTAGATGGGAGCACCAGCATTTGC +
Preference number: 1 (lower is better)
Translates to: TFTVNERVHFLCLDS*WLSVYKVDGSTSIC
Trigger: GCAAATGCTGGTGCTCCCATCTACCTTGTAGACACTTAGCCATCAAGAATCAAGGCACAAGAAGTGCACTCTCTCATTAACAGTAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR TCA 90 bp GTGTATTTCAGTGTTTCCGGAACAATACATCCTGTTCCCCACTACTaGAGATGCAAGAATATTGCACTTTTCCCTTTAGGAGGTACCAAT +
Preference number: 1 (lower is better)
Translates to: VYFSVSGTIHPVPHY*RCKNIALFPLGGTN
Trigger: ATTGGTACCTCCTAAAGGGAAAAGTGCAATATTCTTGCATCTTCAGTAGTGGGGAACAGGATGTATTGTTCCGGAAACACTGAAATACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCAAACAAGCTTCTTGCTaGGCTGGCTCCCCAGTCTTG +
Preference number: 2 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSKQASC*AGSPVL
Trigger: CAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTTT...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCCAGCCTGACCACCCCTaGTCTGCACTAATAATGAAT +
Preference number: 2 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSQPDHP*SALIMN
Trigger: ATTCATTATTAGTGCAGAGCAGGGGTGGTCAGGCTG...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR TCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAGTGCTGCGTTCAGCCTaGCCACCCCTGCTCTGCACT +
Preference number: 2 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKVLRSA*PPLLCT
Trigger: AGTGCAGAGCAGGGGTGGTCAGGCTGAACGCAGCAC...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGGCTGCCCTTCTGTGCTaGGTTCAGCCTGACCACCCC +
Preference number: 2 (lower is better)
Translates to: KELYKYLPRCARWILNLPAALLC*VQPDHP
Trigger: GGGGTGGTCAGGCTGAACGCAGCACAGAAGGGCAGC...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAGCTGCCCTTCTGTGCTaGGTTCAGCCTGACCACCCC +
Preference number: 2 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKAALLC*VQPDHP
Trigger: GGGGTGGTCAGGCTGAACGCAGCACAGAAGGGCAGC...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR TCA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCCCTACACACTTCCACTaGAGCAGAAATACAAAAGCC +
Preference number: 2 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCPTHFH*SRNTKA
Trigger: GGCTTTTGTATTTCTGCTTCAGTGGAAGTGTGTAGG...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAAGTGCTTCAACCTAGGTaGTGGGGTGGCAATCTGCCA +
Preference number: 2 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKVLQPR*WGGNLP
Trigger: TGGCAGATTGCCACCCCAGCACCTAGGTTGAAGCAC...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTAGGGGTGCAGGATACGTaGGGATTGCTGGGGTTAAGC +
Preference number: 2 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLGVQDT*GLLGLS
Trigger: GCTTAACCCCAGCAATCCGCACGTATCCTGCACCCC...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTGGGGTGCAGGATACGTaGGGATTGCTGGGGTTAAGC +
Preference number: 2 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRGVQDT*GLLGLS
Trigger: GCTTAACCCCAGCAATCCGCACGTATCCTGCACCCC...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CCA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCTATCTTTCCCTAGCCTaGCAGGCCATTGTAAAACTT +
Preference number: 2 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCYLSLA*QAIVKL
Trigger: AAGTTTTACAATGGCCTGCCAGGCTAGGGAAAGATA...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAACTGGCTCCCCAGTCTTaGTTAGAGAATGTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKLAPQS*LENVSC
Trigger: GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAG...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAATCCAAACAAGCTTCTTaGTGGGCTGGCTCCCCAGTC +
Preference number: 2 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKSKQAS*WAGSPV
Trigger: GACTGGGGAGCCAGCCCAGCAAGAAGCTTGTTTGGA...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTTCCAAACAAGCTTCTTaGTGGGCTGGCTCCCCAGTC +
Preference number: 2 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRSKQAS*WAGSPV
Trigger: GACTGGGGAGCCAGCCCAGCAAGAAGCTTGTTTGGA...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTGTGCTTCAACCTAGGTaGTGGGGTGGCAATCTGCCA +
Preference number: 2 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRVLQPR*WGGNLP
Trigger: TGGCAGATTGCCACCCCAGCACCTAGGTTGAAGCAC...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTAGTGCTTCAACCTAGGTaGTGGGGTGGCAATCTGCCA +
Preference number: 2 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLVLQPR*WGGNLP
Trigger: TGGCAGATTGCCACCCCAGCACCTAGGTTGAAGCAC...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAAAAACAAGCTTCTTGCTaGGCTGGCTCCCCAGTCTTG +
Preference number: 2 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKKQASC*AGSPVL
Trigger: CAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTTT...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACTTCAACCTAGGTGCTaGGGTGGCAATCTGCCAAGG +
Preference number: 2 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLLQPRC*GGNLPR
Trigger: CCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAACTGGCTCCCCAGTCTTaGTTAGAGAATGTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKLAPQS*LENVSC
Trigger: GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAG...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGCTGGCTCCCCAGTCTTaGTTAGAGAATGTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: KELYKYLPRCARWILNLPLAPQS*LENVSC
Trigger: GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAG...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACTGGCTCCCCAGTCTTaGTTAGAGAATGTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLLAPQS*LENVSC
Trigger: GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAG...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR TCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAAGTGTTCATTCTGAAGTaGAGGCATGGGTGCAAAAGC +
Preference number: 2 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKVFILK*RHGCKS
Trigger: GCTTTTGCACCCATGCCTTCACTTCAGAATGAACAC...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAATGTAGCCCCATCAGCTaGGAAATTGTCCTTAGGGAC +
Preference number: 2 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKCSPIS*EIVLRD
Trigger: GTCCCTAAGGACAATTTCCCAGCTGATGGGGCTACA...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGTGTAGCCCCATCAGCTaGGAAATTGTCCTTAGGGAC +
Preference number: 2 (lower is better)
Translates to: KELYKYLPRCARWILNLPCSPIS*EIVLRD
Trigger: GTCCCTAAGGACAATTTCCCAGCTGATGGGGCTACA...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTATGTAGCCCCATCAGCTaGGAAATTGTCCTTAGGGAC +
Preference number: 2 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLCSPIS*EIVLRD
Trigger: GTCCCTAAGGACAATTTCCCAGCTGATGGGGCTACA...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR TCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAACCTACACACTTCCACTaGAGCAGAAATACAAAAGCC +
Preference number: 2 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKPTHFH*SRNTKA
Trigger: GGCTTTTGTATTTCTGCTTCAGTGGAAGTGTGTAGG...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR TCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAACCTGTTCCCCACTACTaGAGATGCAAGAATATTGCA +
Preference number: 2 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKPVPHY*RCKNIA
Trigger: TGCAATATTCTTGCATCTTCAGTAGTGGGGAACAGG...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR TCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAACAAGTTGGCTACGTTTaGGGTTTTGCAGACTTGAAG +
Preference number: 2 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKQVGYV*GFADLK
Trigger: CTTCAAGTCTGCAAAACCTCAAACGTAGCCAACTTG...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR TCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTGTGTTCATTCTGAAGTaGAGGCATGGGTGCAAAAGC +
Preference number: 2 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRVFILK*RHGCKS
Trigger: GCTTTTGCACCCATGCCTTCACTTCAGAATGAACAC...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTCAGCCTGACCACCCCTaGTCTGCACTAATAATGAAT +
Preference number: 2 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRQPDHP*SALIMN
Trigger: ATTCATTATTAGTGCAGAGCAGGGGTGGTCAGGCTG...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTTTAGAGAATGTGAGCTaGCCTTCTGTGCTGCGTTCA +
Preference number: 2 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRLENVS*PSVLRS
Trigger: TGAACGCAGCACAGAAGGGCAGCTCACATTCTCTAA...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAACTACGTTTGAGGTTTTaGAGACTTGAAGCGGCATTG +
Preference number: 2 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKLRLRF*RLEAAL
Trigger: CAATGCCGCTTCAAGTCTGCAAAACCTCAAACGTAG...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAACAGAACTCTCTGTATTaGAACTACTGTGTAGCCCCA +
Preference number: 2 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKQNSLY*NYCVAP
Trigger: TGGGGCTACACAGTAGTTCCAATACAGAGAGTTCTG...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR TCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTCCTACACACTTCCACTaGAGCAGAAATACAAAAGCC +
Preference number: 2 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRPTHFH*SRNTKA
Trigger: GGCTTTTGTATTTCTGCTTCAGTGGAAGTGTGTAGG...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR TCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAACCTACACACTTCCACTaGAGCAGAAATACAAAAGCC +
Preference number: 2 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKPTHFH*SRNTKA
Trigger: GGCTTTTGTATTTCTGCTTCAGTGGAAGTGTGTAGG...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR TCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACCTGTTCCCCACTACTaGAGATGCAAGAATATTGCA +
Preference number: 2 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLPVPHY*RCKNIA
Trigger: TGCAATATTCTTGCATCTTCAGTAGTGGGGAACAGG...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR TCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTAGAGGTTTTGCAGACTTaGAGCGGCATTGTAACACTT +
Preference number: 2 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLEVLQT*SGIVTL
Trigger: AAGTGTTACAATGCCGCTTCAAGTCTGCAAAACCTC...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR TCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACAAGTTGGCTACGTTTaGGGTTTTGCAGACTTGAAG +
Preference number: 2 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLQVGYV*GFADLK
Trigger: CTTCAAGTCTGCAAAACCTCAAACGTAGCCAACTTG...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR TCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGCAAGTTGGCTACGTTTaGGGTTTTGCAGACTTGAAG +
Preference number: 2 (lower is better)
Translates to: KELYKYLPRCARWILNLPQVGYV*GFADLK
Trigger: CTTCAAGTCTGCAAAACCTCAAACGTAGCCAACTTG...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTCTACGTTTGAGGTTTTaGAGACTTGAAGCGGCATTG +
Preference number: 2 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRLRLRF*RLEAAL
Trigger: CAATGCCGCTTCAAGTCTGCAAAACCTCAAACGTAG...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAACAGAACTCTCTGTATTaGAACTACTGTGTAGCCCCA +
Preference number: 2 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKQNSLY*NYCVAP
Trigger: TGGGGCTACACAGTAGTTCCAATACAGAGAGTTCTG...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAAGAATGCTGTCATGACTaGTCTCAACAGACAAAAGGA +
Preference number: 2 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKECCHD*SQQTKG
Trigger: TCCTTTTGTCTGTTGAGACCAGTCATGACAGCATTC...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR CAA 90 bp ACGGTGTGCCAGATGGATTTTAAATCTGCCGTAACACTTAAATATTaGTCAAGTTGGCTACGTTTGAGGTTTTGCAGACTTGAAGCGGCA +
Preference number: 2 (lower is better)
Translates to: TVCQMDFKSAVTLKY*SSWLRLRFCRLEAA
Trigger: TGCCGCTTCAAGTCTGCAAAACCTCAAACGTAGCCAACTTGACAAATATTTAAGTGTTACGGCAGATTTAAAATCCATCTGGCACACCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAAATACCTACCACGGTGTaGCAGATGGATTTTAAATCT +
Preference number: 2 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKIPTTV*QMDFKS
Trigger: AGATTTAAAATCCATCTGGCACACCGTGGTAGGTAT...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTATATCTTTCCCTAGCCTaGCAGGCCATTGTAAAACTT +
Preference number: 2 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLYLSLA*QAIVKL
Trigger: AAGTTTTACAATGGCCTGCCAGGCTAGGGAAAGATA...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGTATCTTTCCCTAGCCTaGCAGGCCATTGTAAAACTT +
Preference number: 2 (lower is better)
Translates to: KELYKYLPRCARWILNLPYLSLA*QAIVKL
Trigger: AAGTTTTACAATGGCCTGCCAGGCTAGGGAAAGATA...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTGAATGCTGTCATGACTaGTCTCAACAGACAAAAGGA +
Preference number: 2 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRECCHD*SQQTKG
Trigger: TCCTTTTGTCTGTTGAGACCAGTCATGACAGCATTC...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR TCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACTCCTTTACATAAAGTaGAAAAGATGGCAACCACAC +
Preference number: 2 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLLLYIK*KRWQPH
Trigger: GTGTGGTTGCCATCTTTTTCACTTTATGTAAAGGAG...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR TCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTCTCCTTTACATAAAGTaGAAAAGATGGCAACCACAC +
Preference number: 2 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRLLYIK*KRWQPH
Trigger: GTGTGGTTGCCATCTTTTTCACTTTATGTAAAGGAG...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTATACCTACCACGGTGTaGCAGATGGATTTTAAATCT +
Preference number: 2 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRIPTTV*QMDFKS
Trigger: AGATTTAAAATCCATCTGGCACACCGTGGTAGGTAT...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAAAGATGCAAGAATATTaGACTTTTCCCTTTAGGAGG +
Preference number: 2 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKKMQEY*TFPFRR
Trigger: CCTCCTAAAGGGAAAAGTGCAATATTCTTGCATCTT...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTAAGATGCAAGAATATTaGACTTTTCCCTTTAGGAGG +
Preference number: 2 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRKMQEY*TFPFRR
Trigger: CCTCCTAAAGGGAAAAGTGCAATATTCTTGCATCTT...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTATTTCATAATCTTGAATaGTGTCATGACTGGTCTCAA +
Preference number: 2 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLFHNLE*CHDWSQ
Trigger: TTGAGACCAGTCATGACAGCATTCAAGATTATGAAA...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR GCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGTTTCATAATCTTGAATaGTGTCATGACTGGTCTCAA +
Preference number: 2 (lower is better)
Translates to: KELYKYLPRCARWILNLPFHNLE*CHDWSQ
Trigger: TTGAGACCAGTCATGACAGCATTCAAGATTATGAAA...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTAAAATATTTGTCAAGTTaGCTACGTTTGAGGTTTTGC +
Preference number: 2 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLKYLSS*LRLRFC
Trigger: GCAAAACCTCAAACGTAGCCAACTTGACAAATATTT...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTAAATATTTGTCAAGTTaGCTACGTTTGAGGTTTTGC +
Preference number: 2 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRKYLSS*LRLRFC
Trigger: GCAAAACCTCAAACGTAGCCAACTTGACAAATATTT...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CAA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCGCTGGCTCCCCAGTCTaGCTTAGAGAATGTGAGCTG +
Preference number: 3 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSAGSPV*LRECEL
Trigger: CAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGC...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR GCA 72 bp AAGATAGGGCCTATAAACCAGGTGCTTCAACCTAGGTaGTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAA +
Preference number: 3 (lower is better)
Translates to: KIGPINQVLQPR*WGGNLPRARGQ
Trigger: TTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAGCACCTGGTTTATAGGCCCTATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR GCA 72 bp ACCAGGTGCTTCAACCTAGGTGCTGGGGTGGCAATCTaGCAAGGGCCCGAGGGCAACACTCCTTTACATAAA +
Preference number: 3 (lower is better)
Translates to: TRCFNLGAGVAI*QGPEGNTPLHK
Trigger: TTTATGTAAAGGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAGCACCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR GCA 72 bp GCTGCCCTTCTGTGCTGCGTTCAGCCTGACCACCCCTaGTCTGCACTAATAATGAATAAGCTTCGTCCCTAT +
Preference number: 3 (lower is better)
Translates to: AALLCCVQPDHP*SALIMNKLRPY
Trigger: ATAGGGACGAAGCTTATTCATTATTAGTGCAGAGCAGGGGTGGTCAGGCTGAACGCAGCACAGAAGGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CAA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAAGTCCAAACAAGCTTCTaGCTGGGCTGGCTCCCCAGT +
Preference number: 3 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKVQTSF*LGWLPS
Trigger: ACTGGGGAGCCAGCCCAGCAAGAAGCTTGTTTGGAC...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CAA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAAGCTGGCTCCCCAGTCTaGCTTAGAGAATGTGAGCTG +
Preference number: 3 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKAGSPV*LRECEL
Trigger: CAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGC...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CAA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAGTCCAAACAAGCTTCTaGCTGGGCTGGCTCCCCAGT +
Preference number: 3 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKVQTSF*LGWLPS
Trigger: ACTGGGGAGCCAGCCCAGCAAGAAGCTTGTTTGGAC...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR GCA 72 bp CTAAGTGTCTACAAGGTAGATGGGAGCACCAGCATTTaGGCTACCTCTAATCCATCAAGTTGGGAGGTAGCA +
Preference number: 3 (lower is better)
Translates to: LSVYKVDGSTSI*ATSNPSSWEVA
Trigger: TGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAATGCTGGTGCTCCCATCTACCTTGTAGACACTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CAA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGGCTGGCTCCCCAGTCTaGCTTAGAGAATGTGAGCTG +
Preference number: 3 (lower is better)
Translates to: KELYKYLPRCARWILNLPAGSPV*LRECEL
Trigger: CAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGC...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CAA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAACCAGAACTCTCTGTATaGGAACTACTGTGTAGCCCC +
Preference number: 3 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKPELSV*ELLCSP
Trigger: GGGGCTACACAGTAGTTCCAATACAGAGAGTTCTGG...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CAA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAACAGGATACGTGCGGATaGCTGGGGTTAAGCACAATA +
Preference number: 3 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKQDTCG*LGLSTI
Trigger: TATTGTGCTTAACCCCAGCAATCCGCACGTATCCTG...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CAA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACCAGAACTCTCTGTATaGGAACTACTGTGTAGCCCC +
Preference number: 3 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLPELSV*ELLCSP
Trigger: GGGGCTACACAGTAGTTCCAATACAGAGAGTTCTGG...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CAA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACAGGATACGTGCGGATaGCTGGGGTTAAGCACAATA +
Preference number: 3 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLQDTCG*LGLSTI
Trigger: TATTGTGCTTAACCCCAGCAATCCGCACGTATCCTG...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CAA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAACAGGATACGTGCGGATaGCTGGGGTTAAGCACAATA +
Preference number: 3 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKQDTCG*LGLSTI
Trigger: TATTGTGCTTAACCCCAGCAATCCGCACGTATCCTG...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CAA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTAATACAGATGACTCTTTaGGGGTGGGGTGCAGGATAC +
Preference number: 3 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLIQMTL*GWGAGY
Trigger: GTATCCTGCACCCCACCCCAAAAGAGTCATCTGTAT...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CAA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGATACAGATGACTCTTTaGGGGTGGGGTGCAGGATAC +
Preference number: 3 (lower is better)
Translates to: KELYKYLPRCARWILNLPIQMTL*GWGAGY
Trigger: GTATCCTGCACCCCACCCCAAAAGAGTCATCTGTAT...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR TCA 72 bp GTTAATGAGAGAGTGCACTTCTTGTGCCTTGATTCTTaGTGGCTAAGTGTCTACAAGGTAGATGGGAGCACC +
Preference number: 3 (lower is better)
Translates to: VNERVHFLCLDS*WLSVYKVDGST
Trigger: GGTGCTCCCATCTACCTTGTAGACACTTAGCCATCAAGAATCAAGGCACAAGAAGTGCACTCTCTCATTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CAA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAACCATCAGCTGGGAAATaGTCCTTAGGGACTGACTTT +
Preference number: 3 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKPSAGK*SLGTDF
Trigger: AAAGTCAGTCCCTAAGGACAATTTCCCAGCTGATGG...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CAA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACCATCAGCTGGGAAATaGTCCTTAGGGACTGACTTT +
Preference number: 3 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLPSAGK*SLGTDF
Trigger: AAAGTCAGTCCCTAAGGACAATTTCCCAGCTGATGG...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CAA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAATCAAGTTGGCTACGTTaGAGGTTTTGCAGACTTGAA +
Preference number: 3 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKSSWLR*RFCRLE
Trigger: TTCAAGTCTGCAAAACCTCAAACGTAGCCAACTTGA...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CAA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGTCAAGTTGGCTACGTTaGAGGTTTTGCAGACTTGAA +
Preference number: 3 (lower is better)
Translates to: KELYKYLPRCARWILNLPSSWLR*RFCRLE
Trigger: TTCAAGTCTGCAAAACCTCAAACGTAGCCAACTTGA...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR TCA 72 bp AGTGTTTCCGGAACAATACATCCTGTTCCCCACTACTaGAGATGCAAGAATATTGCACTTTTCCCTTTAGGA +
Preference number: 3 (lower is better)
Translates to: SVSGTIHPVPHY*RCKNIALFPLG
Trigger: TCCTAAAGGGAAAAGTGCAATATTCTTGCATCTTCAGTAGTGGGGAACAGGATGTATTGTTCCGGAAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CAA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAAAACACTTTCATAATCTaGAATGCTGTCATGACTGGT +
Preference number: 3 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKNTFII*NAVMTG
Trigger: ACCAGTCATGACAGCATTCAAGATTATGAAAGTGTT...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR-3UTR CAA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTAAACACTTTCATAATCTaGAATGCTGTCATGACTGGT +
Preference number: 3 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLNTFII*NAVMTG
Trigger: ACCAGTCATGACAGCATTCAAGATTATGAAAGTGTT...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR CCA 72 bp TTTAAATCTGCCGTAACACTTAAATATTTGTCAAGTTaGCTACGTTTGAGGTTTTGCAGACTTGAAGCGGCA +
Preference number: 3 (lower is better)
Translates to: FKSAVTLKYLSS*LRLRFCRLEAA
Trigger: TGCCGCTTCAAGTCTGCAAAACCTCAAACGTAGCCAACTTGACAAATATTTAAGTGTTACGGCAGATTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR GCA 72 bp GTAATTAAAAGAACTGTACAAATACCTACCACGGTGTaGCAGATGGATTTTAAATCTGCCGTAACACTTAAA +
Preference number: 3 (lower is better)
Translates to: VIKRTVQIPTTV*QMDFKSAVTLK
Trigger: TTTAAGTGTTACGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTTTAATTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCCCTCTGGTTGCGAGCTaGAGCCCAAGTGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSPLVAS*SPSAAS
Trigger: GGAGGCGGCACTTGGGCTGCAGCTCGCAACCAGAGG...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440464.5
CDS-3UTR GCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCGCTGCCCTTCTGTGCTaGGTTCAGCCTGACCACCCC +
Preference number: 4 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSAALLC*VQPDHP
Trigger: GGGGTGGTCAGGCTGAACGCAGCACAGAAGGGCAGC...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCCGTAGTACCCACCAGTaGTCTCCACCCGGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSRSTHQ*SPPGCH
Trigger: GTGGCAACCGGGTGGAGATCACTGGTGGGTACTACG...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR GCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCCTGGGTCCTGGTGGTTaGAGCAAGGCCCACTGTGAG +
Preference number: 4 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSLGPGG*SKAHCE
Trigger: CTCACAGTGGGCCTTGCTGCAACCACCAGGACCCAG...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCATCCTACTCCGCGGTTaGCTCTCTCGGTCCTTCCGA +
Preference number: 4 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSILLRG*LSRSFR
Trigger: TCGGAAGGACCGAGAGAGGCAACCGCGGAGTAGGAT...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCGGGGTGCAGGATACGTaGGGATTGCTGGGGTTAAGC +
Preference number: 4 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSGVQDT*GLLGLS
Trigger: GCTTAACCCCAGCAATCCGCACGTATCCTGCACCCC...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCGAGCTGCAGCCCAAGTaGCGCCTCCCCCTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCELQPK*RLPLPS
Trigger: GGAAGGGAGGGGGAGGCGGCACTTGGGCTGCAGCTC...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440464.5
CDS-3UTR CCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCTCACATTCTGGGTCCTaGTGGTTGCAGCAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSSHSGS*WLQQGP
Trigger: TGGGCCTTGCTGCAACCACCAGGACCCAGAATGTGA...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCAGAGGGAGGGGAGGATaGAAAGACACCGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSRGRGG*KDTGML
Trigger: CAGCATTCCGGTGTCTTTCCATCCTCCCCTCCCTCT...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCACGGGGCGGTGCACTTaGGGACCACATGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCTGRCT*GPHVAG
Trigger: CCCAGCTACATGTGGTCCTCAAGTGCACCGCCCCGT...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCGGGAGCACCAGCATTTaGGCTACCTCTAATCCATCA +
Preference number: 4 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSGSTSI*ATSNPS
Trigger: TGATGGATTAGAGGTAGCGCAAATGCTGGTGCTCCC...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCCAGTGCTGGGAGAGTTaGGTTCATGTCCTTAAAGCC +
Preference number: 4 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSQCWES*VHVLKA
Trigger: GGCTTTAAGGACATGAACCCAACTCTCCCAGCACTG...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR CCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCTGTAGCCCCATCAGCTaGGAAATTGTCCTTAGGGAC +
Preference number: 4 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSCSPIS*EIVLRD
Trigger: GTCCCTAAGGACAATTTCCCAGCTGATGGGGCTACA...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCCGTAGTACCCACCAGTaGTCTCCACCCGGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCRSTHQ*SPPGCH
Trigger: GTGGCAACCGGGTGGAGATCACTGGTGGGTACTACG...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR TCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCGTGTTCATTCTGAAGTaGAGGCATGGGTGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSVFILK*RHGCKS
Trigger: GCTTTTGCACCCATGCCTTCACTTCAGAATGAACAC...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCTTAGAGAATGTGAGCTaGCCTTCTGTGCTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSLENVS*PSVLRS
Trigger: TGAACGCAGCACAGAAGGGCAGCTCACATTCTCTAA...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAAAAGCGCCCCCGGCTCTaGGCGCCCCGCAGAGCATCC +
Preference number: 4 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKKRPRL*APRRAS
Trigger: GGATGCTCTGCGGGGCGCCCAGAGCCGGGGGCGCTT...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCTCAGATCAATGTGTCTaGCAGCAAAGACCCCGTCAA +
Preference number: 4 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSSDQCV*QQRPRQ
Trigger: TTGACGGGGTCTTTGCTGCCAGACACATTGATCTGA...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCCCTGTTCCCCACTACTaGAGATGCAAGAATATTGCA +
Preference number: 4 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSPVPHY*RCKNIA
Trigger: TGCAATATTCTTGCATCTTCAGTAGTGGGGAACAGG...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCATCCTACTCCGCGGTTaGCTCTCTCGGTCCTTCCGA +
Preference number: 4 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCILLRG*LSRSFR
Trigger: TCGGAAGGACCGAGAGAGGCAACCGCGGAGTAGGAT...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCGTAGGTATTGTAGGATaGCACTTGGGGATGAGCATA +
Preference number: 4 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSVGIVG*HLGMSI
Trigger: TATGCTCATCCCCAAGTGGCATCCTACAATACCTAC...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCGGGGTGCAGGATACGTaGGGATTGCTGGGGTTAAGC +
Preference number: 4 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCGVQDT*GLLGLS
Trigger: GCTTAACCCCAGCAATCCGCACGTATCCTGCACCCC...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTAAAGCGCCCCCGGCTCTaGGCGCCCCGCAGAGCATCC +
Preference number: 4 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLKRPRL*APRRAS
Trigger: GGATGCTCTGCGGGGCGCCCAGAGCCGGGGGCGCTT...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTAAGCGCCCCCGGCTCTaGGCGCCCCGCAGAGCATCC +
Preference number: 4 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRKRPRL*APRRAS
Trigger: GGATGCTCTGCGGGGCGCCCAGAGCCGGGGGCGCTT...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCCATTCTGGGTCCTGGTaGTTGCAGCAAGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCHSGSW*LQQGPL
Trigger: CAGTGGGCCTTGCTGCAACCACCAGGACCCAGAATG...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCCCGGTTAGCGTAGAGTaGTTTCAGATCAATGTGTCT +
Preference number: 4 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSPVSVE*FQINVS
Trigger: AGACACATTGATCTGAAACCACTCTACGCTAACCGG...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCAGGTGGATGATATCTTaGCAACTGCTGACATCGATG +
Preference number: 4 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSRWMIS*QLLTSM
Trigger: CATCGATGTCAGCAGTTGCCAAGATATCATCCACCT...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR CCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCGGGACTGTAAGGTGGTaGCTTTTCAAAAGGTGGATA +
Preference number: 4 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSGTVRW*LFKRWI
Trigger: TATCCACCTTTTGAAAAGCCACCACCTTACAGTCCC...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCTTAGGGACTGTAAGGTaGTGGCTTTTCAAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSLGTVR*WLFKRW
Trigger: CCACCTTTTGAAAAGCCACCACCTTACAGTCCCTAA...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCCAGAACTCTCTGTATTaGAACTACTGTGTAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSQNSLY*NYCVAP
Trigger: TGGGGCTACACAGTAGTTCCAATACAGAGAGTTCTG...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCTCCAAACAAGCTTCTTaGTGGGCTGGCTCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCSKQAS*WAGSPV
Trigger: GACTGGGGAGCCAGCCCAGCAAGAAGCTTGTTTGGA...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCCTTCAACCTAGGTGCTaGGGTGGCAATCTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCLQPRC*GGNLPR
Trigger: CCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCGAATGCTGTCATGACTaGTCTCAACAGACAAAAGGA +
Preference number: 4 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSECCHD*SQQTKG
Trigger: TCCTTTTGTCTGTTGAGACCAGTCATGACAGCATTC...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCAATTCACGGCTGAGGTaGGGGCAGTTAACCTCCTCA +
Preference number: 4 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCNSRLR*GQLTSS
Trigger: TGAGGAGGTTAACTGCCCTCACCTCAGCCGTGAATT...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371369.9
CDS-3UTR GCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAACCCAGTCCCCGAAGCTaGTTCAAGCGCCCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKPSPRS*FKRPRL
Trigger: GAGCCGGGGGCGCTTGAAGCAGCTTCGGGGACTGGG...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGCCCAGTCCCCGAAGCTaGTTCAAGCGCCCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPPSPRS*FKRPRL
Trigger: GAGCCGGGGGCGCTTGAAGCAGCTTCGGGGACTGGG...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACCCAGTCCCCGAAGCTaGTTCAAGCGCCCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLPSPRS*FKRPRL
Trigger: GAGCCGGGGGCGCTTGAAGCAGCTTCGGGGACTGGG...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCAAACAAGCTTCTTGCTaGGCTGGCTCCCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCKQASC*AGSPVL
Trigger: CAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTTT...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCCAGCAAGGCCCACTGTaGGAATTAACACGGACACAA +
Preference number: 4 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCQQGPL*ELTRTQ
Trigger: TTGTGTCCGTGTTAATTCTCACAGTGGGCCTTGCTG...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAAGTGCTGCGTTCAGCCTaGCCACCCCTGCTCTGCACT +
Preference number: 4 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKVLRSA*PPLLCT
Trigger: AGTGCAGAGCAGGGGTGGTCAGGCTGAACGCAGCAC...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCGTCATAAGCAGAATATaGTGGCAGGTGAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCVISRI*WQVRRA
Trigger: AGCCCTCCTCACCTGCCACCATATTCTGCTTATGAC...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCTGTAGCCCCATCAGCTaGGAAATTGTCCTTAGGGAC +
Preference number: 4 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCCSPIS*EIVLRD
Trigger: GTCCCTAAGGACAATTTCCCAGCTGATGGGGCTACA...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCTGGTTGAGGAACTTATaGCCTCCTCAGCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCWLRNL*PPQLPS
Trigger: AGAAGGAAGCTGAGGAGGTCATAAGTTCCTCAACCA...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309720.9
CDS-3UTR TCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTACGGGGCGGTGCACTTaGGGACCACATGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRTGRCT*GPHVAG
Trigger: CCCAGCTACATGTGGTCCTCAAGTGCACCGCCCCGT...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGACGGGGCGGTGCACTTaGGGACCACATGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPTGRCT*GPHVAG
Trigger: CCCAGCTACATGTGGTCCTCAAGTGCACCGCCCCGT...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTGTGCTGCGTTCAGCCTaGCCACCCCTGCTCTGCACT +
Preference number: 4 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRVLRSA*PPLLCT
Trigger: AGTGCAGAGCAGGGGTGGTCAGGCTGAACGCAGCAC...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGGTGCTGCGTTCAGCCTaGCCACCCCTGCTCTGCACT +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPVLRSA*PPLLCT
Trigger: AGTGCAGAGCAGGGGTGGTCAGGCTGAACGCAGCAC...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAACTGGGTCCTGGTGGTTaGAGCAAGGCCCACTGTGAG +
Preference number: 4 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKLGPGG*SKAHCE
Trigger: CTCACAGTGGGCCTTGCTGCAACCACCAGGACCCAG...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTAGCTGCCCTTCTGTGCTaGGTTCAGCCTGACCACCCC +
Preference number: 4 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLAALLC*VQPDHP
Trigger: GGGGTGGTCAGGCTGAACGCAGCACAGAAGGGCAGC...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTGCTGCCCTTCTGTGCTaGGTTCAGCCTGACCACCCC +
Preference number: 4 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRAALLC*VQPDHP
Trigger: GGGGTGGTCAGGCTGAACGCAGCACAGAAGGGCAGC...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCTTTCATAATCTTGAATaGTGTCATGACTGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSFHNLE*CHDWSQ
Trigger: TTGAGACCAGTCATGACAGCATTCAAGATTATGAAA...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGCCCTCCCTCCTCTTCTaGCTCCCTCTGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPPSLLF*LPLLWE
Trigger: CTCCCAGAGCAGAGGGAGGCAGAAGAGGAGGGAGGG...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440464.5
CDS-3UTR CCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAGCAGGGACATGTCGCTaGACCGCTGCTGAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKAGTCR*TAAESG
Trigger: CCCTGACTCAGCAGCGGTCCAGCGACATGTCCCTGC...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGGCAGGGACATGTCGCTaGACCGCTGCTGAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPAGTCR*TAAESG
Trigger: CCCTGACTCAGCAGCGGTCCAGCGACATGTCCCTGC...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTAGGGACTGATGCATGGTaGAAACTGCCCGGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLGTDAW*KLPGCP
Trigger: GGGGCAACCGGGCAGTTTTCACCATGCATCAGTCCC...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAGGGACTGATGCATGGTaGAAACTGCCCGGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKGTDAW*KLPGCP
Trigger: GGGGCAACCGGGCAGTTTTCACCATGCATCAGTCCC...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCGAGGTTTTGCAGACTTaGAGCGGCATTGTAACACTT +
Preference number: 4 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCEVLQT*SGIVTL
Trigger: AAGTGTTACAATGCCGCTTCAAGTCTGCAAAACCTC...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAAGGTCCTTCCGAGAGCTaGGAGACACTGCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKGPSES*ETLPLV
Trigger: AACCAGAGGCAGTGTCTCTCAGCTCTCGGAAGGACC...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAAATGCATGGTGAAAACTaGCCGGTTGCCCCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKMHGEN*PVAPVP
Trigger: GGGGACTGGGGCAACCGGGCAGTTTTCACCATGCAT...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGCTGGGTCCTGGTGGTTaGAGCAAGGCCCACTGTGAG +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPLGPGG*SKAHCE
Trigger: CTCACAGTGGGCCTTGCTGCAACCACCAGGACCCAG...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGAGCAGAAGCAGGTGTTaGCCCGGATGCGAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPSRSRC*PGCEVC
Trigger: GCACACCTCGCATCCGGGGCAACACCTGCTTCTGCT...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR GCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAAGCAGAAGCAGGTGTTaGCCCGGATGCGAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKSRSRC*PGCEVC
Trigger: GCACACCTCGCATCCGGGGCAACACCTGCTTCTGCT...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR GCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTAGCAGAAGCAGGTGTTaGCCCGGATGCGAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRSRSRC*PGCEVC
Trigger: GCACACCTCGCATCCGGGGCAACACCTGCTTCTGCT...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR GCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTGACACTGCCTCTGGTTaGGAGCTGCAGCCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRDTASG*ELQPKC
Trigger: GCACTTGGGCTGCAGCTCGCAACCAGAGGCAGTGTC...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440464.5
CDS-3UTR CCA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCCCGGTTAGCGTAGAGTaGTTTCAGATCAATGTGTCT +
Preference number: 4 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCPVSVE*FQINVS
Trigger: AGACACATTGATCTGAAACCACTCTACGCTAACCGG...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCTATCTTGGCAACTGCTaGCATCGATGTATTCGTAGT +
Preference number: 4 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCYLGNC*HRCIRS
Trigger: ACTACGAATACATCGATGTCAGCAGTTGCCAAGATA...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR TCA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCTTGTGCCTTGATTCTTaGTGGCTAAGTGTCTACAAG +
Preference number: 4 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCLCLDS*WLSVYK
Trigger: CTTGTAGACACTTAGCCATCAAGAATCAAGGCACAA...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTAGGTCCTTCCGAGAGCTaGGAGACACTGCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLGPSES*ETLPLV
Trigger: AACCAGAGGCAGTGTCTCTCAGCTCTCGGAAGGACC...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTATGCATGGTGAAAACTaGCCGGTTGCCCCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRMHGEN*PVAPVP
Trigger: GGGGACTGGGGCAACCGGGCAGTTTTCACCATGCAT...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAGGGGTGCAGGATACGTaGGGATTGCTGGGGTTAAGC +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKGVQDT*GLLGLS
Trigger: GCTTAACCCCAGCAATCCGCACGTATCCTGCACCCC...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTATCTTCTGCCTCCCTCTaGTCTGGGAGGCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLSSASL*SGRQQH
Trigger: ATGCTGCTGCCTCCCAGAGCAGAGGGAGGCAGAAGA...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440464.5
CDS-3UTR CCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACATTCTGGGTCCTGGTaGTTGCAGCAAGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLHSGSW*LQQGPL
Trigger: CAGTGGGCCTTGCTGCAACCACCAGGACCCAGAATG...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAAAGAGGGAGGGGAGGATaGAAAGACACCGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKRGRGG*KDTGML
Trigger: CAGCATTCCGGTGTCTTTCCATCCTCCCCTCCCTCT...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGAGGTGGATAGTAGGGTaGAGAGTAACGGGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPRWIVG*RVTGRC
Trigger: GCACCGCCCCGTTACTCTCCACCCTACTATCCACCT...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTAAGGTGGATAGTAGGGTaGAGAGTAACGGGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLRWIVG*RVTGRC
Trigger: GCACCGCCCCGTTACTCTCCACCCTACTATCCACCT...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAAGGTGGATAGTAGGGTaGAGAGTAACGGGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKRWIVG*RVTGRC
Trigger: GCACCGCCCCGTTACTCTCCACCCTACTATCCACCT...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAACTTCAACCTAGGTGCTaGGGTGGCAATCTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKLQPRC*GGNLPR
Trigger: CCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGGAGAGACACTGCCTCTaGTTGCGAGCTGCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPERHCL*LRAAAQ
Trigger: TTGGGCTGCAGCTCGCAACCAGAGGCAGTGTCTCTC...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTGAGAGACACTGCCTCTaGTTGCGAGCTGCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRERHCL*LRAAAQ
Trigger: TTGGGCTGCAGCTCGCAACCAGAGGCAGTGTCTCTC...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTAGGTGTTGCCCCGGATaGGAGGTGTGCAGAATTCAC +
Preference number: 4 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRRCCPG*EVCRIH
Trigger: GTGAATTCTGCACACCTCGCATCCGGGGCAACACCT...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR GCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTAAGGTGTTGCCCCGGATaGGAGGTGTGCAGAATTCAC +
Preference number: 4 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLRCCPG*EVCRIH
Trigger: GTGAATTCTGCACACCTCGCATCCGGGGCAACACCT...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR GCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGAGGTGTTGCCCCGGATaGGAGGTGTGCAGAATTCAC +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPRCCPG*EVCRIH
Trigger: GTGAATTCTGCACACCTCGCATCCGGGGCAACACCT...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR GCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAGTGCTTCAACCTAGGTaGTGGGGTGGCAATCTGCCA +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKVLQPR*WGGNLP
Trigger: TGGCAGATTGCCACCCCAGCACCTAGGTTGAAGCAC...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCATACCTACCACGGTGTaGCAGATGGATTTTAAATCT +
Preference number: 4 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCIPTTV*QMDFKS
Trigger: AGATTTAAAATCCATCTGGCACACCGTGGTAGGTAT...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTAAGAGCTGAGAGACACTaGCTCTGGTTGCGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLRAERH*LWLRAA
Trigger: TGCAGCTCGCAACCAGAGGCAGTGTCTCTCAGCTCT...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAAGAGCTGAGAGACACTaGCTCTGGTTGCGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKRAERH*LWLRAA
Trigger: TGCAGCTCGCAACCAGAGGCAGTGTCTCTCAGCTCT...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTTCACATTCTGGGTCCTaGTGGTTGCAGCAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRSHSGS*WLQQGP
Trigger: TGGGCCTTGCTGCAACCACCAGGACCCAGAATGTGA...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAATCACATTCTGGGTCCTaGTGGTTGCAGCAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKSHSGS*WLQQGP
Trigger: TGGGCCTTGCTGCAACCACCAGGACCCAGAATGTGA...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGAGAGGGAGGGGAGGATaGAAAGACACCGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPRGRGG*KDTGML
Trigger: CAGCATTCCGGTGTCTTTCCATCCTCCCCTCCCTCT...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTAAGAGGGAGGGGAGGATaGAAAGACACCGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLRGRGG*KDTGML
Trigger: CAGCATTCCGGTGTCTTTCCATCCTCCCCTCCCTCT...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTAGGACCACATGTAGCTaGGTGAGGGAGAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRRTTCS*VRERQT
Trigger: AGTCTGCCTCTCCCTCACCCAGCTACATGTGGTCCT...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTAAGGACCACATGTAGCTaGGTGAGGGAGAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLRTTCS*VRERQT
Trigger: AGTCTGCCTCTCCCTCACCCAGCTACATGTGGTCCT...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAAGGACCACATGTAGCTaGGTGAGGGAGAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKRTTCS*VRERQT
Trigger: AGTCTGCCTCTCCCTCACCCAGCTACATGTGGTCCT...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTCTTCAACCTAGGTGCTaGGGTGGCAATCTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRLQPRC*GGNLPR
Trigger: CCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAATTCGTTTCCTCCGATTaGATGCTCCCATGGAATCGG +
Preference number: 4 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKFVSSD*MLPWNR
Trigger: CCGATTCCATGGGAGCATTCAATCGGAGGAAACGAA...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCGTTCTCAATAAGGTTTaGTCCAATGATTCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCVLNKV*SNDSKE
Trigger: TTCCTTGGAATCATTGGATCAAACCTTATTGAGAAC...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAAAACAAGCTTCTTGCTaGGCTGGCTCCCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKKQASC*AGSPVL
Trigger: CAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTTT...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
47% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACAGTGCTGGGAGAGTTaGGTTCTCCTCAGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLQCWES*VLLSFL
Trigger: AAGGAAGCTGAGGAGAACCCAACTCTCCCAGCACTG...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440464.5
CDS-3UTR CCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAAAGAACAGTTCAGTGCTaGGAGAGTTGGGTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKRTVQC*ESWVLL
Trigger: GAGGAGAACCCAACTCTCCCAGCACTGAACTGTTCT...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440464.5
3UTR CAA 72 bp TATTGGAACTACTGTGTAGCCCCATCAGCTGGGAAATaGTCCTTAGGGACTGACTTTAGGGGTAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: YWNYCVAPSAGK*SLGTDFRGRER
Trigger: TCTTTCCCTACCCCTAAAGTCAGTCCCTAAGGACAATTTCCCAGCTGATGGGGCTACACAGTAGTTCCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGTTCGTTTCCTCCGATTaGATGCTCCCATGGAATCGG +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPFVSSD*MLPWNR
Trigger: CCGATTCCATGGGAGCATTCAATCGGAGGAAACGAA...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAATTCGTTTCCTCCGATTaGATGCTCCCATGGAATCGG +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKFVSSD*MLPWNR
Trigger: CCGATTCCATGGGAGCATTCAATCGGAGGAAACGAA...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAACAGCAAGGCCCACTGTaGGAATTAACACGGACACAA +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKQQGPL*ELTRTQ
Trigger: TTGTGTCCGTGTTAATTCTCACAGTGGGCCTTGCTG...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTCAGCAAGGCCCACTGTaGGAATTAACACGGACACAA +
Preference number: 4 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRQQGPL*ELTRTQ
Trigger: TTGTGTCCGTGTTAATTCTCACAGTGGGCCTTGCTG...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAAATTCACGGCTGAGGTaGGGGCAGTTAACCTCTCTA +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKNSRLR*GQLTSL
Trigger: TAGAGAGGTTAACTGCCCTCACCTCAGCCGTGAATT...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000309720.9
CDS-3UTR TCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAAATTCACGGCTGAGGTaGGGGCAGTTAACCATCTCT +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKNSRLR*GQLTIS
Trigger: AGAGATGGTTAACTGCCCTCACCTCAGCCGTGAATT...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000371352.5
CDS-3UTR GCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAGGGAGCACCAGCATTTaGGCTACCTCTAATCCATCA +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKGSTSI*ATSNPS
Trigger: TGATGGATTAGAGGTAGCGCAAATGCTGGTGCTCCC...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTCAGTGCTGGGAGAGTTaGGTTCATGTCCTTAAAGCC +
Preference number: 4 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRQCWES*VHVLKA
Trigger: GGCTTTAAGGACATGAACCCAACTCTCCCAGCACTG...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR CCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAAAGAACAGTTCAGTGCTaGGAGAGTTGGGTTCATGTC +
Preference number: 4 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKRTVQC*ESWVHV
Trigger: GACATGAACCCAACTCTCCCAGCACTGAACTGTTCT...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR CCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAGTCATAAGCAGAATATaGTGGCAGGTGAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKVISRI*WQVRRA
Trigger: AGCCCTCCTCACCTGCCACCATATTCTGCTTATGAC...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCAAATATTTGTCAAGTTaGCTACGTTTGAGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCKYLSS*LRLRFC
Trigger: GCAAAACCTCAAACGTAGCCAACTTGACAAATATTT...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAGTGTTCATTCTGAAGTaGAGGCATGGGTGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKVFILK*RHGCKS
Trigger: GCTTTTGCACCCATGCCTTCACTTCAGAATGAACAC...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAAAACAGAACAGTTCAGTaGTGGGAGAGTTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKNRTVQ*WESWVH
Trigger: ATGAACCCAACTCTCCCAGCACTGAACTGTTCTGTT...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR GCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAACAGCCTGACCACCCCTaGTCTGCACTAATAATGAAT +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKQPDHP*SALIMN
Trigger: ATTCATTATTAGTGCAGAGCAGGGGTGGTCAGGCTG...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGCAGCCTGACCACCCCTaGTCTGCACTAATAATGAAT +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPQPDHP*SALIMN
Trigger: ATTCATTATTAGTGCAGAGCAGGGGTGGTCAGGCTG...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAATTAGAGAATGTGAGCTaGCCTTCTGTGCTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKLENVS*PSVLRS
Trigger: TGAACGCAGCACAGAAGGGCAGCTCACATTCTCTAA...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGAACAGAACAGTTCAGTaGTGGGAGAGTTGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPNRTVQ*WESWVL
Trigger: GAGAACCCAACTCTCCCAGCACTGAACTGTTCTGTT...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440464.5
CDS-3UTR CCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGAGACCCCGTCAACTATaGCACAACAAAAAGCCGCAA +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPRPRQL*HNKKPQ
Trigger: TTGCGGCTTTTTGTTGTGCCATAGTTGACGGGGTCT...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTAAGACCCCGTCAACTATaGCACAACAAAAAGCCGCAA +
Preference number: 4 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLRPRQL*HNKKPQ
Trigger: TTGCGGCTTTTTGTTGTGCCATAGTTGACGGGGTCT...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTAGACCCCGTCAACTATaGCACAACAAAAAGCCGCAA +
Preference number: 4 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRRPRQL*HNKKPQ
Trigger: TTGCGGCTTTTTGTTGTGCCATAGTTGACGGGGTCT...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAATCAGATCAATGTGTCTaGCAGCAAAGACCCCGTCAA +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKSDQCV*QQRPRQ
Trigger: TTGACGGGGTCTTTGCTGCCAGACACATTGATCTGA...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTTCAGATCAATGTGTCTaGCAGCAAAGACCCCGTCAA +
Preference number: 4 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRSDQCV*QQRPRQ
Trigger: TTGACGGGGTCTTTGCTGCCAGACACATTGATCTGA...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGAGAACAGTTCAGTGCTaGGAGAGTTGGGTTCATGTC +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPRTVQC*ESWVHV
Trigger: GACATGAACCCAACTCTCCCAGCACTGAACTGTTCT...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR TCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACCTACACACTTCCACTaGAGCAGAAATACAAAAGCC +
Preference number: 4 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLPTHFH*SRNTKA
Trigger: GGCTTTTGTATTTCTGCTTCAGTGGAAGTGTGTAGG...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGCCTACACACTTCCACTaGAGCAGAAATACAAAAGCC +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPPTHFH*SRNTKA
Trigger: GGCTTTTGTATTTCTGCTTCAGTGGAAGTGTGTAGG...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAACCTGTTCCCCACTACTaGAGATGCAAGAATATTGCA +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKPVPHY*RCKNIA
Trigger: TGCAATATTCTTGCATCTTCAGTAGTGGGGAACAGG...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAGAGGTTTTGCAGACTTaGAGCGGCATTGTAACACTT +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKEVLQT*SGIVTL
Trigger: AAGTGTTACAATGCCGCTTCAAGTCTGCAAAACCTC...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTGAGGTTTTGCAGACTTaGAGCGGCATTGTAACACTT +
Preference number: 4 (lower is better)
Translates to: CLENCLIRYPPVAPVFLREVLQT*SGIVTL
Trigger: AAGTGTTACAATGCCGCTTCAAGTCTGCAAAACCTC...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAACAAGTTGGCTACGTTTaGGGTTTTGCAGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKQVGYV*GFADLK
Trigger: CTTCAAGTCTGCAAAACCTCAAACGTAGCCAACTTG...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAATTGTGCCTTGATTCTTaGTGGCTAAGTGTCTACAAG +
Preference number: 4 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKLCLDS*WLSVYK
Trigger: CTTGTAGACACTTAGCCATCAAGAATCAAGGCACAA...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGCCCATCCAGATGCAATaGAGTGCTGCTAAATTTGTC +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPPIQMQ*SAAKFV
Trigger: GACAAATTTAGCAGCACTTCATTGCATCTGGATGGG...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371352.5
CDS-3UTR GCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGGAAGCCACCAGCATCTaGCTTTTGTTCTCAATAAGG +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPEATSI*LLFSIR
Trigger: CCTTATTGAGAACAAAAGGCAGATGCTGGTGGCTTC...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAGAAGCCACCAGCATCTaGCTTTTGTTCTCAATAAGG +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKEATSI*LLFSIR
Trigger: CCTTATTGAGAACAAAAGGCAGATGCTGGTGGCTTC...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTAAACAGAACAGTTCAGTaGTGGGAGAGTTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLNRTVQ*WESWVH
Trigger: ATGAACCCAACTCTCCCAGCACTGAACTGTTCTGTT...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR GCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTAACAGAACAGTTCAGTaGTGGGAGAGTTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRNRTVQ*WESWVH
Trigger: ATGAACCCAACTCTCCCAGCACTGAACTGTTCTGTT...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR GCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAGTAGGTATTGTAGGATaGCACTTGGGGATGAGCATA +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKVGIVG*HLGMSI
Trigger: TATGCTCATCCCCAAGTGGCATCCTACAATACCTAC...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGGTAGGTATTGTAGGATaGCACTTGGGGATGAGCATA +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPVGIVG*HLGMSI
Trigger: TATGCTCATCCCCAAGTGGCATCCTACAATACCTAC...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTGTAGGTATTGTAGGATaGCACTTGGGGATGAGCATA +
Preference number: 4 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRVGIVG*HLGMSI
Trigger: TATGCTCATCCCCAAGTGGCATCCTACAATACCTAC...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACTACGTTTGAGGTTTTaGAGACTTGAAGCGGCATTG +
Preference number: 4 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLLRLRF*RLEAAL
Trigger: CAATGCCGCTTCAAGTCTGCAAAACCTCAAACGTAG...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGTCTCCCCCATCCAGATaGAATGAAGTGCTGCTAAAT +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPSPPSR*NEVLLN
Trigger: ATTTAGCAGCACTTCATTGCATCTGGATGGGGGAGA...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371352.5
CDS-3UTR CCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTAGGGACTGTAAGGTGGTaGCTTTTCAAAAGGTGGATA +
Preference number: 4 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLGTVRW*LFKRWI
Trigger: TATCCACCTTTTGAAAAGCCACCACCTTACAGTCCC...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGGGGACTGTAAGGTGGTaGCTTTTCAAAAGGTGGATA +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPGTVRW*LFKRWI
Trigger: TATCCACCTTTTGAAAAGCCACCACCTTACAGTCCC...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAGGGACTGTAAGGTGGTaGCTTTTCAAAAGGTGGATA +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKGTVRW*LFKRWI
Trigger: TATCCACCTTTTGAAAAGCCACCACCTTACAGTCCC...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGTTAGGGACTGTAAGGTaGTGGCTTTTCAAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPLGTVR*WLFKRW
Trigger: CCACCTTTTGAAAAGCCACCACCTTACAGTCCCTAA...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAATATCTTTCCCTAGCCTaGCAGGCCATTGTAAAACTT +
Preference number: 4 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKYLSLA*QAIVKL
Trigger: AAGTTTTACAATGGCCTGCCAGGCTAGGGAAAGATA...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTCAGAACTCTCTGTATTaGAACTACTGTGTAGCCCCA +
Preference number: 4 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRQNSLY*NYCVAP
Trigger: TGGGGCTACACAGTAGTTCCAATACAGAGAGTTCTG...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACAGAACTCTCTGTATTaGAACTACTGTGTAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLQNSLY*NYCVAP
Trigger: TGGGGCTACACAGTAGTTCCAATACAGAGAGTTCTG...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGTATCTTGGCAACTGCTaGCATCGATGTATTCGTAGT +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPYLGNC*HRCIRS
Trigger: ACTACGAATACATCGATGTCAGCAGTTGCCAAGATA...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR TCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAATATCTTGGCAACTGCTaGCATCGATGTATTCGTAGT +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKYLGNC*HRCIRS
Trigger: ACTACGAATACATCGATGTCAGCAGTTGCCAAGATA...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR TCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAACTCCTTTACATAAAGTaGAAAAGATGGCAACCACAC +
Preference number: 4 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKLLYIK*KRWQPH
Trigger: GTGTGGTTGCCATCTTTTTCACTTTATGTAAAGGAG...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTATTGTGCCTTGATTCTTaGTGGCTAAGTGTCTACAAG +
Preference number: 4 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLLCLDS*WLSVYK
Trigger: CTTGTAGACACTTAGCCATCAAGAATCAAGGCACAA...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAACTGTTAATGAGAGAGTaGACTTCTTGTGCCTTGATT +
Preference number: 4 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKLLMRE*TSCALI
Trigger: AATCAAGGCACAAGAAGTGCACTCTCTCATTAACAG...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGGAATGCTGTCATGACTaGTCTCAACAGACAAAAGGA +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPECCHD*SQQTKG
Trigger: TCCTTTTGTCTGTTGAGACCAGTCATGACAGCATTC...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR CAA 72 bp GCAGACTTGAAGCGGCATTGTAACACTTTCATAATCTaGAATGCTGTCATGACTGGTCTCAACAGACAAAAG +
Preference number: 4 (lower is better)
Translates to: ADLKRHCNTFII*NAVMTGLNRQK
Trigger: CTTTTGTCTGTTGAGACCAGTCATGACAGCATTCAAGATTATGAAAGTGTTACAATGCCGCTTCAAGTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGCTCCTTTACATAAAGTaGAAAAGATGGCAACCACAC +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPLLYIK*KRWQPH
Trigger: GTGTGGTTGCCATCTTTTTCACTTTATGTAAAGGAG...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAACTCCTTTACATAAAGTaGAAAAGATGGCAACCACAC +
Preference number: 4 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKLLYIK*KRWQPH
Trigger: GTGTGGTTGCCATCTTTTTCACTTTATGTAAAGGAG...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAAAAGATGCAAGAATATTaGACTTTTCCCTTTAGGAGG +
Preference number: 4 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKKMQEY*TFPFRR
Trigger: CCTCCTAAAGGGAAAAGTGCAATATTCTTGCATCTT...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTAATACCTACCACGGTGTaGCAGATGGATTTTAAATCT +
Preference number: 4 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLIPTTV*QMDFKS
Trigger: AGATTTAAAATCCATCTGGCACACCGTGGTAGGTAT...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTCTGTTAATGAGAGAGTaGACTTCTTGTGCCTTGATT +
Preference number: 4 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRLLMRE*TSCALI
Trigger: AATCAAGGCACAAGAAGTGCACTCTCTCATTAACAG...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACTGTTAATGAGAGAGTaGACTTCTTGTGCCTTGATT +
Preference number: 4 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLLLMRE*TSCALI
Trigger: AATCAAGGCACAAGAAGTGCACTCTCTCATTAACAG...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR TCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTGTTCTCAATAAGGTTTaGTCCAATGATTCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRVLNKV*SNDSKE
Trigger: TTCCTTGGAATCATTGGATCAAACCTTATTGAGAAC...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGAAGATGCAAGAATATTaGACTTTTCCCTTTAGGAGG +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPKMQEY*TFPFRR
Trigger: CCTCCTAAAGGGAAAAGTGCAATATTCTTGCATCTT...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAATTTCATAATCTTGAATaGTGTCATGACTGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKFHNLE*CHDWSQ
Trigger: TTGAGACCAGTCATGACAGCATTCAAGATTATGAAA...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR GCA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTTTTCATAATCTTGAATaGTGTCATGACTGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRFHNLE*CHDWSQ
Trigger: TTGAGACCAGTCATGACAGCATTCAAGATTATGAAA...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CCA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGAAATATTTGTCAAGTTaGCTACGTTTGAGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: KELYKYLPRCARWILNLPKYLSS*LRLRFC
Trigger: GCAAAACCTCAAACGTAGCCAACTTGACAAATATTT...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
3UTR CAA 72 bp CAGATGGATTTTAAATCTGCCGTAACACTTAAATATTaGTCAAGTTGGCTACGTTTGAGGTTTTGCAGACTT +
Preference number: 4 (lower is better)
Translates to: QMDFKSAVTLKY*SSWLRLRFCRL
Trigger: AAGTCTGCAAAACCTCAAACGTAGCCAACTTGACAAATATTTAAGTGTTACGGCAGATTTAAAATCCATCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS GCA 90 bp GCGCCCCCGGCTCTGGGCGCCCCGCAGAGCATCCTACTCCGCGGTTaGCTCTCTCGGTCCTTCCGAGAGCTGAGAGACACTGCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: APPALGAPQSILLRG*LSRSFRELRDTASG
Trigger: ACCAGAGGCAGTGTCTCTCAGCTCTCGGAAGGACCGAGAGAGGCAACCGCGGAGTAGGATGCTCTGCGGGGCGCCCAGAGCCGGGGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371369.9
ENST00000440464.5
ENST00000519908.1
CDS TCA 90 bp AGAGCATCCTACTCCGCGGTTGCCTCTCTCGGTCCTTCCGAGAGCTaGGAGACACTGCCTCTGGTTGCGAGCTGCAGCCCAAGTGCCGCC +
Preference number: 5 (lower is better)
Translates to: RASYSAVASLGPSES*ETLPLVASCSPSAA
Trigger: GGCGGCACTTGGGCTGCAGCTCGCAACCAGAGGCAGTGTCTCTCAGCTCTCGGAAGGACCGAGAGAGGCAACCGCGGAGTAGGATGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440464.5
ENST00000519908.1
CDS GCA 90 bp CGAGAGCTGAGAGACACTGCCTCTGGTTGCGAGCTGCAGCCCAAGTaGCGCCTCCCCCTCCCTTCCACTCTTCTCCCTCCCTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: RELRDTASGCELQPK*RLPLPSTLLPPSSS
Trigger: AGAAGAGGAGGGAGGGAGAAGAGTGGAAGGGAGGGGGAGGCGGCACTTGGGCTGCAGCTCGCAACCAGAGGCAGTGTCTCTCAGCTCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440464.5
ENST00000519908.1
CDS-3UTR CAA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCCATCCTACTCCGCGGTaGCCTCTCTCGGTCCTTCCG +
Preference number: 5 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSHPTPR*PLSVLP
Trigger: CGGAAGGACCGAGAGAGGCAACCGCGGAGTAGGATG...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS TCA 90 bp GGGACATGTCGCTGGACCGCTGCTGAGTCAGGGACTGATGCATGGTaGAAACTGCCCGGTTGCCCCAGTCCCCGAAGCTGCTTCAAGCGC +
Preference number: 5 (lower is better)
Translates to: GTCRWTAAESGTDAW*KLPGCPSPRSCFKR
Trigger: GCGCTTGAAGCAGCTTCGGGGACTGGGGCAACCGGGCAGTTTTCACCATGCATCAGTCCCTGACTCAGCAGCGGTCCAGCGACATGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
ENST00000480821.1
ENST00000519908.1
CDS-3UTR CAA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCAACAGGCCAACAATGTaGAGGATGGTGGCAGACCAG +
Preference number: 5 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSNRPTM*RMVADQ
Trigger: CTGGTCTGCCACCATCCTCAACATTGTTGGCCTGTT...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR CAA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCCATCCTACTCCGCGGTaGCCTCTCTCGGTCCTTCCG +
Preference number: 5 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCHPTPR*PLSVLP
Trigger: CGGAAGGACCGAGAGAGGCAACCGCGGAGTAGGATG...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCCAGCAGAAGCAGGTGTaGCCCCGGATGCGAGGTGTG +
Preference number: 5 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCQQKQV*PRMRGV
Trigger: CACACCTCGCATCCGGGGCAACACCTGCTTCTGCTG...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR CAA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCATACAGATGACTCTTTaGGGGTGGGGTGCAGGATAC +
Preference number: 5 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSIQMTL*GWGAGY
Trigger: GTATCCTGCACCCCACCCCAAAAGAGTCATCTGTAT...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS TCA 90 bp CAGGTGTTGCCCCGGATGCGAGGTGTGCAGAATTCACGGCTGAGGTaGGGGCAGTTAACCTCTCTAGCTGCCTGGGTAAGGTTCCTCATA +
Preference number: 5 (lower is better)
Translates to: QVLPRMRGVQNSRLR*GQLTSLAAWVRFLI
Trigger: TATGAGGAACCTTACCCAGGCAGCTAGAGAGGTTAACTGCCCTCACCTCAGCCGTGAATTCTGCACACCTCGCATCCGGGGCAACACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309720.9
CDS-3UTR CAA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCCCATCAGCTGGGAAATaGTCCTTAGGGACTGACTTT +
Preference number: 5 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSPSAGK*SLGTDF
Trigger: AAAGTCAGTCCCTAAGGACAATTTCCCAGCTGATGG...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCGTCCAAACAAGCTTCTaGCTGGGCTGGCTCCCCAGT +
Preference number: 5 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCVQTSF*LGWLPS
Trigger: ACTGGGGAGCCAGCCCAGCAAGAAGCTTGTTTGGAC...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp CTTCAACCTAGGTGCTGGGGTGGCAATCTGCCAAGGGCCCGAGGGCAACACTCCACCAGCATCTGCCTTTaGTTCTCAATAAGGTTTGAT +
Preference number: 5 (lower is better)
Translates to: LQPRCWGGNLPRARGQHSTSICL*FSIRFD
Trigger: ATCAAACCTTATTGAGAACAAAAGGCAGATGCTGGT...GGAGTGTTGCCCTCGGGCCCTTGGCAGATTGCCACCCCAGCACCTAGGTTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAACAGCAGAAGCAGGTGTaGCCCCGGATGCGAGGTGTG +
Preference number: 5 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKQQKQV*PRMRGV
Trigger: CACACCTCGCATCCGGGGCAACACCTGCTTCTGCTG...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR CAA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCATACAGATGACTCTTTaGGGGTGGGGTGCAGGATAC +
Preference number: 5 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCIQMTL*GWGAGY
Trigger: GTATCCTGCACCCCACCCCAAAAGAGTCATCTGTAT...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCTTTCGTTTCCTCCGATaGAATGCTCCCATGGAATCG +
Preference number: 5 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCFRFLR*NAPMES
Trigger: CGATTCCATGGGAGCATTCAATCGGAGGAAACGAAA...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAACAGCAGAAGCAGGTGTaGCCCCGGATGCGAGGTGTG +
Preference number: 5 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKQQKQV*PRMRGV
Trigger: CACACCTCGCATCCGGGGCAACACCTGCTTCTGCTG...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR CAA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCCCATCAGCTGGGAAATaGTCCTTAGGGACTGACTTT +
Preference number: 5 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCPSAGK*SLGTDF
Trigger: AAAGTCAGTCCCTAAGGACAATTTCCCAGCTGATGG...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS GCA 90 bp TGTGCAGAATTCACGGCTGAGGTGAGGGCAGTTAACCTCTCTAGCTaGCTGGGTAAGGTTCCTCATAACCCTCGTGGAAGGAGAATTTTT +
Preference number: 5 (lower is better)
Translates to: CAEFTAEVRAVNLSS*LGKVPHNPRGRRIF
Trigger: AAAAATTCTCCTTCCACGAGGGTTATGAGGAACCTTACCCAGGCAGCTAGAGAGGTTAACTGCCCTCACCTCAGCCGTGAATTCTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309720.9
CDS-3UTR CAA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAAACGGGGCGGTGCACTaGAGGACCACATGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKNGAVH*RTTCSW
Trigger: CCAGCTACATGTGGTCCTCAAGTGCACCGCCCCGTT...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTAACGGGGCGGTGCACTaGAGGACCACATGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRNGAVH*RTTCSW
Trigger: CCAGCTACATGTGGTCCTCAAGTGCACCGCCCCGTT...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS CCA 90 bp GGATGGAAAGACACCGGAATGCTGAAAGTCATAAGCAGAATATGGTaGCAGGTGAGGAGGGCTATGGTAGTAGGTATTGTAGGATGCCAC +
Preference number: 5 (lower is better)
Translates to: GWKDTGMLKVISRIW*QVRRAMVVGIVGCH
Trigger: GTGGCATCCTACAATACCTACTACCATAGCCCTCCTCACCTGCCACCATATTCTGCTTATGACTTTCAGCATTCCGGTGTCTTTCCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTAGTCCAAACAAGCTTCTaGCTGGGCTGGCTCCCCAGT +
Preference number: 5 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLVQTSF*LGWLPS
Trigger: ACTGGGGAGCCAGCCCAGCAAGAAGCTTGTTTGGAC...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGGTCCAAACAAGCTTCTaGCTGGGCTGGCTCCCCAGT +
Preference number: 5 (lower is better)
Translates to: KELYKYLPRCARWILNLPVQTSF*LGWLPS
Trigger: ACTGGGGAGCCAGCCCAGCAAGAAGCTTGTTTGGAC...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTGTCCAAACAAGCTTCTaGCTGGGCTGGCTCCCCAGT +
Preference number: 5 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRVQTSF*LGWLPS
Trigger: ACTGGGGAGCCAGCCCAGCAAGAAGCTTGTTTGGAC...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS CCA 90 bp ATAATCTCAATAGCCAGCAGGCATTCCTCTTTAGGGACTGTAAGGTaGTGGCTTTTCAAAAGGTGGATAGTAGGGTGGAGAGTAACGGGG +
Preference number: 5 (lower is better)
Translates to: IISIASRHSSLGTVR*WLFKRWIVGWRVTG
Trigger: CCCCGTTACTCTCCACCCTACTATCCACCTTTTGAAAAGCCACCACCTTACAGTCCCTAAAGAGGAATGCCTGCTGGCTATTGAGATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTGCTGGCTCCCCAGTCTaGCTTAGAGAATGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRAGSPV*LRECEL
Trigger: CAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGC...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAATCAGTGCTGGGAGAGTaGGGTTCTCCTCAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKSVLGE*GSPQLP
Trigger: AGGAAGCTGAGGAGAACCCAACTCTCCCAGCACTGA...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440464.5
CDS GCA 90 bp ATATGGTGGCAGGTGAGGAGGGCTATGGTAGTAGGTATTGTAGGATaGCACTTGGGGATGAGCATAGTAAGAAACTGTTGGATGGGTATT +
Preference number: 5 (lower is better)
Translates to: IWWQVRRAMVVGIVG*HLGMSIVRNCWMGI
Trigger: AATACCCATCCAACAGTTTCTTACTATGCTCATCCCCAAGTGGCATCCTACAATACCTACTACCATAGCCCTCCTCACCTGCCACCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTAACAGGCCAACAATGTaGAGGATGGTGGCAGACCAG +
Preference number: 5 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRNRPTM*RMVADQ
Trigger: CTGGTCTGCCACCATCCTCAACATTGTTGGCCTGTT...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR CAA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAAACAGGCCAACAATGTaGAGGATGGTGGCAGACCAG +
Preference number: 5 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKNRPTM*RMVADQ
Trigger: CTGGTCTGCCACCATCCTCAACATTGTTGGCCTGTT...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR CAA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCCATAGTAAGAAACTGTaGGATGGGTATTTTCAACAG +
Preference number: 5 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCHSKKL*DGYFQQ
Trigger: CTGTTGAAAATACCCATCCAACAGTTTCTTACTATG...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp AACAAGCTTCTTGCTGGGCTGGCTCCCCAGTCTTGCTTAGAGAATGTGAGCTGCAACACTTTCATAATCTaGAATGCTGTCATGACTGGT +
Preference number: 5 (lower is better)
Translates to: NKLLAGLAPQSCLENVSCNTFII*NAVMTG
Trigger: ACCAGTCATGACAGCATTCAAGATTATGAAAGTGTT...GCAGCTCACATTCTCTAAGCAAGACTGGGGAGCCAGCCCAGCAAGAAGCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS CCA 90 bp GGTATTGTAGGATGCCACTTGGGGATGAGCATAGTAAGAAACTGTTaGATGGGTATTTTCAACAGAACAGTTCAGTGCTGGGAGAGTTGG +
Preference number: 5 (lower is better)
Translates to: GIVGCHLGMSIVRNC*MGIFNRTVQCWESW
Trigger: CCAACTCTCCCAGCACTGAACTGTTCTGTTGAAAATACCCATCCAACAGTTTCTTACTATGCTCATCCCCAAGTGGCATCCTACAATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAAGAGGTGGATGATATCTaGGCAACTGCTGACATCGAT +
Preference number: 5 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKEVDDI*ATADID
Trigger: ATCGATGTCAGCAGTTGCCAAGATATCATCCACCTC...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR CAA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGCCAGAACTCTCTGTATaGGAACTACTGTGTAGCCCC +
Preference number: 5 (lower is better)
Translates to: KELYKYLPRCARWILNLPPELSV*ELLCSP
Trigger: GGGGCTACACAGTAGTTCCAATACAGAGAGTTCTGG...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAATACAGATGACTCTTTaGGGGTGGGGTGCAGGATAC +
Preference number: 5 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKIQMTL*GWGAGY
Trigger: GTATCCTGCACCCCACCCCAAAAGAGTCATCTGTAT...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTATTTCGTTTCCTCCGATaGAATGCTCCCATGGAATCG +
Preference number: 5 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLFRFLR*NAPMES
Trigger: CGATTCCATGGGAGCATTCAATCGGAGGAAACGAAA...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAATTTCGTTTCCTCCGATaGAATGCTCCCATGGAATCG +
Preference number: 5 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKFRFLR*NAPMES
Trigger: CGATTCCATGGGAGCATTCAATCGGAGGAAACGAAA...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGGAGGTGGATGATATCTaGGCAACTGCTGACATCGAT +
Preference number: 5 (lower is better)
Translates to: KELYKYLPRCARWILNLPEVDDI*ATADID
Trigger: ATCGATGTCAGCAGTTGCCAAGATATCATCCACCTC...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS-3UTR CAA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTCCATCAGCTGGGAAATaGTCCTTAGGGACTGACTTT +
Preference number: 5 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRPSAGK*SLGTDF
Trigger: AAAGTCAGTCCCTAAGGACAATTTCCCAGCTGATGG...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACTTGTTAGCAAGAAATaGTCCAGCTCTCTCCCCCAT +
Preference number: 5 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLLVSKK*SSSLPH
Trigger: ATGGGGGAGAGAGCTGGACAATTTCTTGCTAACAAG...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000371352.5
CDS-3UTR CAA 90 bp ATTTGCGCTACCTCTAATCCATCAAGTTGGGAGGTAGCAAAATTGGCCGGAAAAGTGGAAGGAGAATTTTaGGTTGAGGAACTTATGACC +
Preference number: 5 (lower is better)
Translates to: ICATSNPSSWEVAKLAGKVEGEF*VEELMT
Trigger: GGTCATAAGTTCCTCAACCAAAAATTCTCCTTCCAC...TTTTCCGGCCAATTTTGCTACCTCCCAACTTGATGGATTAGAGGTAGCGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309720.9
CDS-3UTR CAA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTTCAAGTTGGCTACGTTaGAGGTTTTGCAGACTTGAA +
Preference number: 5 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRSSWLR*RFCRLE
Trigger: TTCAAGTCTGCAAAACCTCAAACGTAGCCAACTTGA...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp CTGTGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTATCAAGTTGGCTACGTTaGAGGTTTTGCAGACTTGAA +
Preference number: 5 (lower is better)
Translates to: LCLENCLIRYPPVAPVFLSSWLR*RFCRLE
Trigger: TTCAAGTCTGCAAAACCTCAAACGTAGCCAACTTGA...TAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAACCAGCATCTGCCTTTaGTTCTCAATAAGGTTTGAT +
Preference number: 5 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKTSICL*FSIRFD
Trigger: ATCAAACCTTATTGAGAACAAAAGGCAGATGCTGGT...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp AAAGAACTGTACAAATACCTACCACGGTGTGCCAGATGGATTTTAAATCTGCCGCATAGTAAGAAACTGTaGGATGGGTATTTTCAACAG +
Preference number: 5 (lower is better)
Translates to: KELYKYLPRCARWILNLPHSKKL*DGYFQQ
Trigger: CTGTTGAAAATACCCATCCAACAGTTTCTTACTATG...CGGCAGATTTAAAATCCATCTGGCACACCGTGGTAGGTATTTGTACAGTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAACATAGTAAGAAACTGTaGGATGGGTATTTTCAACAG +
Preference number: 5 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKHSKKL*DGYFQQ
Trigger: CTGTTGAAAATACCCATCCAACAGTTTCTTACTATG...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp TGTTTGGAGAACTGTCTAATTAGGTACCCTCCTGTAGCCCCTGTATTTTTACGTAACACTTTCATAATCTaGAATGCTGTCATGACTGGT +
Preference number: 5 (lower is better)
Translates to: CLENCLIRYPPVAPVFLRNTFII*NAVMTG
Trigger: ACCAGTCATGACAGCATTCAAGATTATGAAAGTGTT...ACGTAAAAATACAGGGGCTACAGGAGGGTACCTAATTAGACAGTTCTCCAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS-3UTR CAA 90 bp TGTCATGACTGGTCTCAACAGACAAAAGGACCGATAAGACCAGTGGCATTAAAAAACACTTTCATAATCTaGAATGCTGTCATGACTGGT +
Preference number: 5 (lower is better)
Translates to: CHDWSQQTKGPIRPVALKNTFII*NAVMTG
Trigger: ACCAGTCATGACAGCATTCAAGATTATGAAAGTGTT...TTTTAATGCCACTGGTCTTATCGGTCCTTTTGTCTGTTGAGACCAGTCATGACA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS CAA 90 bp AGCGCCCCCGGCTCTGGGCGCCCCGCAGAGCATCCTACTCCGCGGTaGCCTCTCTCGGTCCTTCCGAGAGCTGAGAGACACTGCCTCTGG +
Preference number: 6 (lower is better)
Translates to: SAPGSGRPAEHPTPR*PLSVLPRAERHCLW
Trigger: CCAGAGGCAGTGTCTCTCAGCTCTCGGAAGGACCGAGAGAGGCAACCGCGGAGTAGGATGCTCTGCGGGGCGCCCAGAGCCGGGGGCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371369.9
ENST00000440464.5
ENST00000519908.1
CDS CAA 72 bp GGCTCTGGGCGCCCCGCAGAGCATCCTACTCCGCGGTaGCCTCTCTCGGTCCTTCCGAGAGCTGAGAGACAC +
Preference number: 6 (lower is better)
Translates to: GSGRPAEHPTPR*PLSVLPRAERH
Trigger: GTGTCTCTCAGCTCTCGGAAGGACCGAGAGAGGCAACCGCGGAGTAGGATGCTCTGCGGGGCGCCCAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
ENST00000519908.1
CDS GCA 72 bp GCTCTGGGCGCCCCGCAGAGCATCCTACTCCGCGGTTaGCTCTCTCGGTCCTTCCGAGAGCTGAGAGACACT +
Preference number: 6 (lower is better)
Translates to: ALGAPQSILLRG*LSRSFRELRDT
Trigger: AGTGTCTCTCAGCTCTCGGAAGGACCGAGAGAGGCAACCGCGGAGTAGGATGCTCTGCGGGGCGCCCAGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
ENST00000519908.1
CDS CCA 72 bp CTCTCGGTCCTTCCGAGAGCTGAGAGACACTGCCTCTaGTTGCGAGCTGCAGCCCAAGTGCCGCCTCCCCCT +
Preference number: 6 (lower is better)
Translates to: LSVLPRAERHCL*LRAAAQVPPPP
Trigger: AGGGGGAGGCGGCACTTGGGCTGCAGCTCGCAACCAGAGGCAGTGTCTCTCAGCTCTCGGAAGGACCGAGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440464.5
ENST00000519908.1
CDS TCA 72 bp CGCTGGACCGCTGCTGAGTCAGGGACTGATGCATGGTaGAAACTGCCCGGTTGCCCCAGTCCCCGAAGCTGC +
Preference number: 6 (lower is better)
Translates to: RWTAAESGTDAW*KLPGCPSPRSC
Trigger: GCAGCTTCGGGGACTGGGGCAACCGGGCAGTTTTCACCATGCATCAGTCCCTGACTCAGCAGCGGTCCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309720.9
ENST00000371369.9
ENST00000440464.5
ENST00000480821.1
ENST00000519908.1
CDS TCA 72 bp TACTCCGCGGTTGCCTCTCTCGGTCCTTCCGAGAGCTaGGAGACACTGCCTCTGGTTGCGAGCTGCAGCCCA +
Preference number: 6 (lower is better)
Translates to: YSAVASLGPSES*ETLPLVASCSP
Trigger: TGGGCTGCAGCTCGCAACCAGAGGCAGTGTCTCTCAGCTCTCGGAAGGACCGAGAGAGGCAACCGCGGAGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371369.9
ENST00000440464.5
ENST00000519908.1
CDS GCA 72 bp TTGCCTCTCTCGGTCCTTCCGAGAGCTGAGAGACACTaGCTCTGGTTGCGAGCTGCAGCCCAAGTGCCGCCT +
Preference number: 6 (lower is better)
Translates to: LPLSVLPRAERH*LWLRAAAQVPP
Trigger: AGGCGGCACTTGGGCTGCAGCTCGCAACCAGAGGCAGTGTCTCTCAGCTCTCGGAAGGACCGAGAGAGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440464.5
ENST00000519908.1
CDS TCA 72 bp CCCCGGATGCGAGGTGTGCAGAATTCACGGCTGAGGTaGGGGCAGTTAACCTCTCTAGCTGCCTGGGTAAGG +
Preference number: 6 (lower is better)
Translates to: PRMRGVQNSRLR*GQLTSLAAWVR
Trigger: CCTTACCCAGGCAGCTAGAGAGGTTAACTGCCCTCACCTCAGCCGTGAATTCTGCACACCTCGCATCCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309720.9
CDS CAA 72 bp GTGGATAGTAGGGTGGAGAGTAACGGGGCGGTGCACTaGAGGACCACATGTAGCTGGGTGAGGGAGAGGCAG +
Preference number: 6 (lower is better)
Translates to: VDSRVESNGAVH*RTTCSWVRERQ
Trigger: CTGCCTCTCCCTCACCCAGCTACATGTGGTCCTCAAGTGCACCGCCCCGTTACTCTCCACCCTACTATCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS TCA 72 bp CCCCGGATGCGAGGTGTGCAGAATTCACGGCTGAGGTaGGGGCAGTTAACCTCCTCAGCTTCCTTCTGTGAT +
Preference number: 6 (lower is better)
Translates to: PRMRGVQNSRLR*GQLTSSASFCD
Trigger: ATCACAGAAGGAAGCTGAGGAGGTTAACTGCCCTCACCTCAGCCGTGAATTCTGCACACCTCGCATCCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371369.9
CDS GCA 72 bp TTCACGGCTGAGGTGAGGGCAGTTAACCTCTCTAGCTaGCTGGGTAAGGTTCCTCATAACCCTCGTGGAAGG +
Preference number: 6 (lower is better)
Translates to: FTAEVRAVNLSS*LGKVPHNPRGR
Trigger: CCTTCCACGAGGGTTATGAGGAACCTTACCCAGGCAGCTAGAGAGGTTAACTGCCCTCACCTCAGCCGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309720.9
CDS CAA 72 bp GATAACACTTTCTGGGGCCCCTCCGGTGAACGAGTTTaGTTGACACTGAGTCTTCTGCGGGCAGTAGGGAGA +
Preference number: 6 (lower is better)
Translates to: DNTFWGPSGERV*LTLSLLRAVGR
Trigger: TCTCCCTACTGCCCGCAGAAGACTCAGTGTCAACAAAACTCGTTCACCGGAGGGGCCCCAGAAAGTGTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480821.1
CDS CAA 90 bp CATCCAGGAGATAACACTTTCTGGGGCCCCTCCGGTGAACGAGTTTaGTTGACACTGAGTCTTCTGCGGGCAGTAGGGAGATTATATAGG +
Preference number: 6 (lower is better)
Translates to: HPGDNTFWGPSGERV*LTLSLLRAVGRLYR
Trigger: CCTATATAATCTCCCTACTGCCCGCAGAAGACTCAGTGTCAACAAAACTCGTTCACCGGAGGGGCCCCAGAAAGTGTTATCTCCTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480821.1
CDS CAA 90 bp AGGTGTGCAGAATTCACGGCTGAGGTGAGGGCAGTTAACCATCTCTaGTTAGCAAGAAATTGTCCAGCTCTCTCCCCCATCCAGATGCAA +
Preference number: 6 (lower is better)
Translates to: RCAEFTAEVRAVNHL*LARNCPALSPIQMQ
Trigger: TTGCATCTGGATGGGGGAGAGAGCTGGACAATTTCTTGCTAACAAGAGATGGTTAACTGCCCTCACCTCAGCCGTGAATTCTGCACACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371352.5
CDS CAA 72 bp GAATTCACGGCTGAGGTGAGGGCAGTTAACCATCTCTaGTTAGCAAGAAATTGTCCAGCTCTCTCCCCCATC +
Preference number: 6 (lower is better)
Translates to: EFTAEVRAVNHL*LARNCPALSPI
Trigger: GATGGGGGAGAGAGCTGGACAATTTCTTGCTAACAAGAGATGGTTAACTGCCCTCACCTCAGCCGTGAATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371352.5
CDS CAA 90 bp GCTGCCTGGGTAAGGTTCCTCATAACCCTCGTGGAAGGAGAATTTTaGGTTGAGGAACTTATGACCTCCTCAGCTTCCTTCTGTGATGTC +
Preference number: 6 (lower is better)
Translates to: AAWVRFLITLVEGEF*VEELMTSSASFCDV
Trigger: GACATCACAGAAGGAAGCTGAGGAGGTCATAAGTTCCTCAACCAAAAATTCTCCTTCCACGAGGGTTATGAGGAACCTTACCCAGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309720.9
CDS GCA 72 bp CAGGTGAGGAGGGCTATGGTAGTAGGTATTGTAGGATaGCACTTGGGGATGAGCATAGTAAGAAACTGTTGG +
Preference number: 6 (lower is better)
Translates to: QVRRAMVVGIVG*HLGMSIVRNCW
Trigger: CCAACAGTTTCTTACTATGCTCATCCCCAAGTGGCATCCTACAATACCTACTACCATAGCCCTCCTCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS CAA 90 bp TGGCAGGTGAGGAGGGCTATGGTAGTAGGTATTGTAGGATGCCACTaGGGGATGAGCATAGTAAGAAACTGTTGGATGGGTATTTTCAAC +
Preference number: 6 (lower is better)
Translates to: WQVRRAMVVGIVGCH*GMSIVRNCWMGIFN
Trigger: GTTGAAAATACCCATCCAACAGTTTCTTACTATGCTCATCCCCAAGTGGCATCCTACAATACCTACTACCATAGCCCTCCTCACCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS GCA 72 bp AACTGTTGGATGGGTATTTTCAACAGAACAGTTCAGTaGTGGGAGAGTTGGGTTCTCCTCAGCTTCCTTCTG +
Preference number: 6 (lower is better)
Translates to: NCWMGIFNRTVQ*WESWVLLSFLL
Trigger: CAGAAGGAAGCTGAGGAGAACCCAACTCTCCCAGCACTGAACTGTTCTGTTGAAAATACCCATCCAACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440464.5
CDS CAA 72 bp AGGAGGGCTATGGTAGTAGGTATTGTAGGATGCCACTaGGGGATGAGCATAGTAAGAAACTGTTGGATGGGT +
Preference number: 6 (lower is better)
Translates to: RRAMVVGIVGCH*GMSIVRNCWMG
Trigger: ACCCATCCAACAGTTTCTTACTATGCTCATCCCCAAGTGGCATCCTACAATACCTACTACCATAGCCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS GCA 72 bp AACTGTTGGATGGGTATTTTCAACAGAACAGTTCAGTaGTGGGAGAGTTGGGTTCATGTCCTTAAAGCCTCC +
Preference number: 6 (lower is better)
Translates to: NCWMGIFNRTVQ*WESWVHVLKAS
Trigger: GGAGGCTTTAAGGACATGAACCCAACTCTCCCAGCACTGAACTGTTCTGTTGAAAATACCCATCCAACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS CCA 72 bp TGTTGGATGGGTATTTTCAACAGAACAGTTCAGTGCTaGGAGAGTTGGGTTCATGTCCTTAAAGCCTCCAAG +
Preference number: 6 (lower is better)
Translates to: CWMGIFNRTVQC*ESWVHVLKASK
Trigger: CTTGGAGGCTTTAAGGACATGAACCCAACTCTCCCAGCACTGAACTGTTCTGTTGAAAATACCCATCCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
CDS CCA 72 bp GGATGCCACTTGGGGATGAGCATAGTAAGAAACTGTTaGATGGGTATTTTCAACAGAACAGTTCAGTGCTGG +
Preference number: 6 (lower is better)
Translates to: GCHLGMSIVRNC*MGIFNRTVQCW
Trigger: CCAGCACTGAACTGTTCTGTTGAAAATACCCATCCAACAGTTTCTTACTATGCTCATCCCCAAGTGGCATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS CCA 72 bp AAAGACACCGGAATGCTGAAAGTCATAAGCAGAATATaGTGGCAGGTGAGGAGGGCTATGGTAGTAGGTATT +
Preference number: 6 (lower is better)
Translates to: KDTGMLKVISRI*WQVRRAMVVGI
Trigger: AATACCTACTACCATAGCCCTCCTCACCTGCCACCATATTCTGCTTATGACTTTCAGCATTCCGGTGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS CAA 72 bp GTAAGGTTCCTCATAACCCTCGTGGAAGGAGAATTTTaGGTTGAGGAACTTATGACCTCCTCAGCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: VRFLITLVEGEF*VEELMTSSASF
Trigger: GAAGGAAGCTGAGGAGGTCATAAGTTCCTCAACCAAAAATTCTCCTTCCACGAGGGTTATGAGGAACCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309720.9
CDS CAA 90 bp AGGTATTGTAGGATGCCACTTGGGGATGAGCATAGTAAGAAACTGTaGGATGGGTATTTTCAACAGAACAGTTCAGTGCTGGGAGAGTTG +
Preference number: 6 (lower is better)
Translates to: RYCRMPLGDEHSKKL*DGYFQQNSSVLGEL
Trigger: CAACTCTCCCAGCACTGAACTGTTCTGTTGAAAATACCCATCCAACAGTTTCTTACTATGCTCATCCCCAAGTGGCATCCTACAATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS CAA 72 bp AGGATGCCACTTGGGGATGAGCATAGTAAGAAACTGTaGGATGGGTATTTTCAACAGAACAGTTCAGTGCTG +
Preference number: 6 (lower is better)
Translates to: RMPLGDEHSKKL*DGYFQQNSSVL
Trigger: CAGCACTGAACTGTTCTGTTGAAAATACCCATCCAACAGTTTCTTACTATGCTCATCCCCAAGTGGCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309720.9
ENST00000371352.5
ENST00000371369.9
ENST00000440464.5
CDS TCA 72 bp AGAAATTGTCCAGCTCTCTCCCCCATCCAGATGCAATaGAGTGCTGCTAAATTTGTCTTGCTTTGTTATAGA +
Preference number: 6 (lower is better)
Translates to: RNCPALSPIQMQ*SAAKFVLLCYR
Trigger: TCTATAACAAAGCAAGACAAATTTAGCAGCACTTCATTGCATCTGGATGGGGGAGAGAGCTGGACAATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371352.5
CDS CAA 72 bp TCTCCCCCATCCAGATGCAATGAAGTGCTGCTAAATTaGTCTTGCTTTGTTATAGAGAATATTCATAGCAAA +
Preference number: 6 (lower is better)
Translates to: SPPSRCNEVLLN*SCFVIENIHSK
Trigger: TTTGCTATGAATATTCTCTATAACAAAGCAAGACAAATTTAGCAGCACTTCATTGCATCTGGATGGGGGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371352.5