Pregenerated sensors for TMEM254 (Homo sapiens)
Ensembl gene IDs: ENSG00000133678Ensembl transcript IDs: ENST00000372275.5, ENST00000372277.7, ENST00000372281.8, ENST00000472622.5, ENST00000483732.5, ENST00000613758.4
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | CCGACCACTTGTGATGCCTTTATGCCAGCTGTGACCTaGGCAAATCACTCAGAATCTCTCAGAATCAGTTTT | + |
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Preference number: 3 (lower is better) Translates to: PTTCDAFMPAVT*ANHSESLRISF Trigger: AAAACTGATTCTGAGAGATTCTGAGTGATTTGCCCAGGTCACAGCTGGCATAAAGGCATCACAAGTGGTCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372275.5 |
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| CDS-3UTR GCA 90 bp | ACTTGTGATGCCTTTATGCCAGCTGTGACCTGGGCAAATCACTCAGAATCTCTCGTAGGTCGCGCCGGCTaGCGTAGCCATGGCTGCAAC | + |
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Preference number: 4 (lower is better) Translates to: TCDAFMPAVTWANHSESLVGRAG*RSHGCN Trigger: GTTGCAGCCATGGCTACGGCAGCCGGCGCGACCTAC...GAGAGATTCTGAGTGATTTGCCCAGGTCACAGCTGGCATAAAGGCATCACAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372275.5 |
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| CDS-3UTR CCA 90 bp | ACTTGTGATGCCTTTATGCCAGCTGTGACCTGGGCAAATCACTCAGAATCTCTCATGCCAGCTGTGACCTaGGCAAATCACTCAGAATCT | + |
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Preference number: 4 (lower is better) Translates to: TCDAFMPAVTWANHSESLMPAVT*ANHSES Trigger: AGATTCTGAGTGATTTGCCCAGGTCACAGCTGGCAT...GAGAGATTCTGAGTGATTTGCCCAGGTCACAGCTGGCATAAAGGCATCACAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372275.5 |
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| CDS-3UTR CCA 90 bp | ACTTGTGATGCCTTTATGCCAGCTGTGACCTGGGCAAATCACTCAGAATCTCTCATTTGCACAATACTATaGCATACAAGGACTCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: TCDAFMPAVTWANHSESLICTIL*HTRTLP Trigger: TGGGAGAGTCCTTGTATGCCATAGTATTGTGCAAAT...GAGAGATTCTGAGTGATTTGCCCAGGTCACAGCTGGCATAAAGGCATCACAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372275.5 |
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| CDS GCA 90 bp | ACTGCCTCGCTGAAAGTAGGTCGCGCCGGCTGCCGTAGCCATGGCTaGAACACCTCCCCGGGAGCGCGCTTCAGGACACCGTCGAGCGCG | + |
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Preference number: 5 (lower is better) Translates to: TASLKVGRAGCRSHG*NTSPGARFRTPSSA Trigger: CGCGCTCGACGGTGTCCTGAAGCGCGCTCCCGGGGAGGTGTTGCAGCCATGGCTACGGCAGCCGGCGCGACCTACTTTCAGCGAGGCAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000372277.7 ENST00000472622.5 ENST00000613758.4 |
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| CDS GCA 90 bp | TGTGAACCAGAACAGACTGCCTCGCTGAAAGTAGGTCGCGCCGGCTaGCGTAGCCATGGCTGCAACACCTCCCCGGGAGCGCGCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CEPEQTASLKVGRAG*RSHGCNTSPGARFR Trigger: CCTGAAGCGCGCTCCCGGGGAGGTGTTGCAGCCATGGCTACGGCAGCCGGCGCGACCTACTTTCAGCGAGGCAGTCTGTTCTGGTTCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000372277.7 ENST00000372281.8 ENST00000472622.5 ENST00000613758.4 |
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| CDS CCA 90 bp | TCAAACATTCTGCTTCGGAAGCCCTATTCTGACTTGGCAGGCCTATaGCAGTCTGTTAACTTGACTTTCCGCTTCGTGAGAGGCTTAGGC | + |
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Preference number: 5 (lower is better) Translates to: SNILLRKPYSDLAGL*QSVNLTFRFVRGLG Trigger: GCCTAAGCCTCTCACGAAGCGGAAAGTCAAGTTAACAGACTGCCATAGGCCTGCCAAGTCAGAATAGGGCTTCCGAAGCAGAATGTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483732.5 |
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| CDS-3UTR CAA 90 bp | ACTTGTGATGCCTTTATGCCAGCTGTGACCTGGGCAAATCACTCAGAATCTCTCACTTCAAGTTTGTTTTaGGCGCTTCCGTTTGTAAGC | + |
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Preference number: 5 (lower is better) Translates to: TCDAFMPAVTWANHSESLTSSLF*ALPFVS Trigger: GCTTACAAACGGAAGCGCCAAAAACAAACTTGAAGT...GAGAGATTCTGAGTGATTTGCCCAGGTCACAGCTGGCATAAAGGCATCACAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372275.5 |
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| CDS GCA 72 bp | CTGAAAGTAGGTCGCGCCGGCTGCCGTAGCCATGGCTaGAACACCTCCCCGGGAGCGCGCTTCAGGACACCG | + |
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Preference number: 6 (lower is better) Translates to: LKVGRAGCRSHG*NTSPGARFRTP Trigger: CGGTGTCCTGAAGCGCGCTCCCGGGGAGGTGTTGCAGCCATGGCTACGGCAGCCGGCGCGACCTACTTTCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000372277.7 ENST00000472622.5 ENST00000613758.4 |
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| CDS GCA 72 bp | GAACAGACTGCCTCGCTGAAAGTAGGTCGCGCCGGCTaGCGTAGCCATGGCTGCAACACCTCCCCGGGAGCG | + |
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Preference number: 6 (lower is better) Translates to: EQTASLKVGRAG*RSHGCNTSPGA Trigger: CGCTCCCGGGGAGGTGTTGCAGCCATGGCTACGGCAGCCGGCGCGACCTACTTTCAGCGAGGCAGTCTGTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000372277.7 ENST00000372281.8 ENST00000472622.5 ENST00000613758.4 |
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| CDS CAA 90 bp | CGGAAGCCCTATTCTGACTTGGCAGGCCTATGGCAGTCTGTTAACTaGACTTTCCGCTTCGTGAGAGGCTTAGGCTCGGATAACCCGTTA | + |
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Preference number: 6 (lower is better) Translates to: RKPYSDLAGLWQSVN*TFRFVRGLGSDNPL Trigger: TAACGGGTTATCCGAGCCTAAGCCTCTCACGAAGCGGAAAGTCAAGTTAACAGACTGCCATAGGCCTGCCAAGTCAGAATAGGGCTTCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483732.5 |
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| CDS CCA 72 bp | CTGCTTCGGAAGCCCTATTCTGACTTGGCAGGCCTATaGCAGTCTGTTAACTTGACTTTCCGCTTCGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: LLRKPYSDLAGL*QSVNLTFRFVR Trigger: TCTCACGAAGCGGAAAGTCAAGTTAACAGACTGCCATAGGCCTGCCAAGTCAGAATAGGGCTTCCGAAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483732.5 |
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| CDS CAA 72 bp | TATTCTGACTTGGCAGGCCTATGGCAGTCTGTTAACTaGACTTTCCGCTTCGTGAGAGGCTTAGGCTCGGAT | + |
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Preference number: 6 (lower is better) Translates to: YSDLAGLWQSVN*TFRFVRGLGSD Trigger: ATCCGAGCCTAAGCCTCTCACGAAGCGGAAAGTCAAGTTAACAGACTGCCATAGGCCTGCCAAGTCAGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483732.5 |
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| CDS CAA 90 bp | ATTCCTATTGGCTCAAACATTCTGCTTCGGAAGCCCTATTCTGACTaGGCAGGCCTATGGCAGTCTGTTAACTTGACTTTCCGCTTCGTG | + |
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Preference number: 6 (lower is better) Translates to: IPIGSNILLRKPYSD*AGLWQSVNLTFRFV Trigger: CACGAAGCGGAAAGTCAAGTTAACAGACTGCCATAGGCCTGCCAAGTCAGAATAGGGCTTCCGAAGCAGAATGTTTGAGCCAATAGGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483732.5 |
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| CDS CAA 90 bp | CCTACCCATCCTTTAGATTTATCCCCGTTTTCCAAACAATTCCTATaGGCTCAAACATTCTGCTTCGGAAGCCCTATTCTGACTTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: PTHPLDLSPFSKQFL*AQTFCFGSPILTWQ Trigger: CTGCCAAGTCAGAATAGGGCTTCCGAAGCAGAATGTTTGAGCCAATAGGAATTGTTTGGAAAACGGGGATAAATCTAAAGGATGGGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000483732.5 |
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| CDS CAA 90 bp | CTCAGCCAAACAAACGTCGCTCTTTTTCTAGGTACAGCTTTCTTCTaGCTTCCACACCTATGTCAGAACAGTTATAGCCTCTTTATCCTC | + |
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Preference number: 6 (lower is better) Translates to: LSQTNVALFLGTAFF*LPHLCQNSYSLFIL Trigger: GAGGATAAAGAGGCTATAACTGTTCTGACATAGGTGTGGAAGCAAGAAGAAAGCTGTACCTAGAAAAAGAGCGACGTTTGTTTGGCTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000483732.5 |
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| CDS CAA 72 bp | CCTTTAGATTTATCCCCGTTTTCCAAACAATTCCTATaGGCTCAAACATTCTGCTTCGGAAGCCCTATTCTG | + |
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Preference number: 6 (lower is better) Translates to: PLDLSPFSKQFL*AQTFCFGSPIL Trigger: CAGAATAGGGCTTCCGAAGCAGAATGTTTGAGCCAATAGGAATTGTTTGGAAAACGGGGATAAATCTAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000483732.5 |
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