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Pregenerated sensors for TMEM239 (Homo sapiens)

Ensembl gene IDs: ENSG00000198326

Ensembl transcript IDs: ENST00000361033.1, ENST00000380585.2

Found 322 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCTTCTGGTGCCTGAGCGGCTTGCTGGGTCAGTTTTGGAAACCCTaGGGCTGTGCTGTCCCCACTCACACAGCTGTGCAAGCATCTGGC +
Preference number: 1 (lower is better)
Translates to: PFWCLSGLLGQFWKP*GCAVPTHTAVQASG
Trigger: GCCAGATGCTTGCACAGCTGTGTGAGTGGGGACAGCACAGCCCCAGGGTTTCCAAAACTGACCCAGCAAGCCGCTCAGGCACCAGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR TCA 90 bp AGTCTAGGGAGGAGGATGCGTGGGCTGCAAGGTTTGGAGAGCGAGTaGGTTGAGGTCTCCTGGGGCTTCTGGCCAGCCTTCTCCCTGATA +
Preference number: 1 (lower is better)
Translates to: SLGRRMRGLQGLESE*VEVSWGFWPAFSLI
Trigger: TATCAGGGAGAAGGCTGGCCAGAAGCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCAGCCCACGCATCCTCCTCCCTAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR TCA 90 bp AGGGAGGAGGATGCGTGGGCTGCAAGGTTTGGAGAGCGAGTGAGTTaGGGTCTCCTGGGGCTTCTGGCCAGCCTTCTCCCTGATAGATTT +
Preference number: 1 (lower is better)
Translates to: REEDAWAARFGERVS*GLLGLLASLLPDRF
Trigger: AAATCTATCAGGGAGAAGGCTGGCCAGAAGCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCAGCCCACGCATCCTCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR CCA 90 bp GAGCATCTGGTCAGGGCCCCAAACTCCTCTCTCCCTTCATTGGAATaGACCCAAGGCTCCAGAGCAACGTCCCTGGCTAGCAATGCATGG +
Preference number: 1 (lower is better)
Translates to: EHLVRAPNSSLPSLE*TQGSRATSLASNAW
Trigger: CCATGCATTGCTAGCCAGGGACGTTGCTCTGGAGCCTTGGGTCCATTCCAATGAAGGGAGAGAGGAGTTTGGGGCCCTGACCAGATGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR TCA 90 bp GACTCACGCCCAGCCTCAGCTCATGCACCAAAACCCATCCAACCATaGGACCACATCAGCCCCATGTCCTACCTCGCTCTCACTACCATG +
Preference number: 1 (lower is better)
Translates to: DSRPASAHAPKPIQP*DHISPMSYLALTTM
Trigger: CATGGTAGTGAGAGCGAGGTAGGACATGGGGCTGATGTGGTCTCATGGTTGGATGGGTTTTGGTGCATGAGCTGAGGCTGGGCGTGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR CCA 90 bp CTCTCCCTTCATTGGAATGGACCCAAGGCTCCAGAGCAACGTCCCTaGCTAGCAATGCATGGCCAAGTCAATGATGGATCTAGGCCAGGC +
Preference number: 1 (lower is better)
Translates to: LSLHWNGPKAPEQRP*LAMHGQVNDGSRPG
Trigger: GCCTGGCCTAGATCCATCATTGACTTGGCCATGCATTGCTAGCCAGGGACGTTGCTCTGGAGCCTTGGGTCCATTCCAATGAAGGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR CCA 90 bp AATGATGGATCTAGGCCAGGCAGCCTGGTCTCTGCCCTCACCACATaGGATCCTGAATCCTCAGCTTGCCATCTAGATTGGCTTGACTCA +
Preference number: 1 (lower is better)
Translates to: NDGSRPGSLVSALTT*DPESSACHLDWLDS
Trigger: TGAGTCAAGCCAATCTAGATGGCAAGCTGAGGATTCAGGATCCCATGTGGTGAGGGCAGAGACCAGGCTGCCTGGCCTAGATCCATCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR GCA 90 bp TATCATCACATCCATATGGGCGCTATCAGTGGCTTGGTCAAGCTCTaGCCCTGGCTAAGCAATTTTCACCAATGGCTAAGCCATCTGTCT +
Preference number: 1 (lower is better)
Translates to: YHHIHMGAISGLVKL*PWLSNFHQWLSHLS
Trigger: AGACAGATGGCTTAGCCATTGGTGAAAATTGCTTAGCCAGGGGCAGAGCTTGACCAAGCCACTGATAGCGCCCATATGGATGTGATGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR GCA 90 bp CATGAGACCACATCAGCCCCATGTCCTACCTCGCTCTCACTACCATaGCATAATGCGGGAGAAATACAAAGAAACAGAAAGGAAGGACTG +
Preference number: 1 (lower is better)
Translates to: HETTSAPCPTSLSLP*HNAGEIQRNRKEGL
Trigger: CAGTCCTTCCTTTCTGTTTCTTTGTATTTCTCCCGCATTATGGCATGGTAGTGAGAGCGAGGTAGGACATGGGGCTGATGTGGTCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR CCA 90 bp CCACTGGCAACTGGCTATCCTGGGCCTGACTTCTCATCTCTAAAATaGGATGGTCACAGCATAGCTATAATTTGTGGTGCTAGGAGTGGT +
Preference number: 1 (lower is better)
Translates to: PLATGYPGPDFSSLK*DGHSIAIICGARSG
Trigger: ACCACTCCTAGCACCACAAATTATAGCTATGCTGTGACCATCCCATTTTAGAGATGAGAAGTCAGGCCCAGGATAGCCAGTTGCCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR CCA 90 bp TATCATGTACCTTACTTGGTAATTACCGATCACTCAATGTTTTGTTaGAGGGGCCAGCAAGTGAACGAACGGCCAGCATTCAGGGCATCA +
Preference number: 1 (lower is better)
Translates to: YHVPYLVITDHSMFC*RGQQVNERPAFRAS
Trigger: TGATGCCCTGAATGCTGGCCGTTCGTTCACTTGCTGGCCCCTCCAACAAAACATTGAGTGATCGGTAATTACCAAGTAAGGTACATGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR TCA 90 bp CTTGTTTACCATTTTAGGGCCAAAATTCTATCCAGGACAGAGAGTTaGTCTGAAAGCCCAGAGAAGCTTCCTGTTCCTTCAACAGTCTTT +
Preference number: 1 (lower is better)
Translates to: LVYHFRAKILSRTES*SESPEKLPVPSTVF
Trigger: AAAGACTGTTGAAGGAACAGGAAGCTTCTCTGGGCTTTCAGATCAACTCTCTGTCCTGGATAGAATTTTGGCCCTAAAATGGTAAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR TCA 90 bp GTGCCTGAGCGGCTTGCTGGGTCAGTTTTGGAAACCCTGGGGCTGTGCTGTCCCCCTGCAGCATTGACTTaGGGAAGGAGTCCGGGGTCA +
Preference number: 2 (lower is better)
Translates to: VPERLAGSVLETLGLCCPPAALT*GRSPGS
Trigger: TGACCCCGGACTCCTTCCTCAAGTCAATGCTGCAGG...GGGACAGCACAGCCCCAGGGTTTCCAAAACTGACCCAGCAAGCCGCTCAGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR TCA 90 bp TGCCTGAGCGGCTTGCTGGGTCAGTTTTGGAAACCCTGGGGCTGTGCTGTCCCCAGGAACCTGCAGCATTaGCTTGAGGAAGGAGTCCGG +
Preference number: 2 (lower is better)
Translates to: CLSGLLGQFWKPWGCAVPRNLQH*LEEGVR
Trigger: CCGGACTCCTTCCTCAAGTCAATGCTGCAGGTTCCT...GGGGACAGCACAGCCCCAGGGTTTCCAAAACTGACCCAGCAAGCCGCTCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR CCA 90 bp CTGCCCACATCCCATCCACTAGAGCATCTGGTCAGGGCCCCAAACTCCTCTCTCGCGCTATCAGTGGCTTaGTCAAGCTCTGCCCCTGGC +
Preference number: 2 (lower is better)
Translates to: LPTSHPLEHLVRAPNSSLALSVA*SSSAPG
Trigger: GCCAGGGGCAGAGCTTGACCAAGCCACTGATAGCGC...GAGAGAGGAGTTTGGGGCCCTGACCAGATGCTCTAGTGGATGGGATGTGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR TCA 90 bp ACTCACGCCCAGCCTCAGCTCATGCACCAAAACCCATCCAACCATGAGACCACAGGAGGGGCCAGCAAGTaGACGAACGGCCAGCATTCA +
Preference number: 2 (lower is better)
Translates to: THAQPQLMHQNPSNHETTGGASK*TNGQHS
Trigger: TGAATGCTGGCCGTTCGTTCACTTGCTGGCCCCTCC...TGTGGTCTCATGGTTGGATGGGTTTTGGTGCATGAGCTGAGGCTGGGCGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR CAA 90 bp CCACTAGAGCATCTGGTCAGGGCCCCAAACTCCTCTCTCCCTTCATaGGAATGGACCCAAGGCTCCAGAGCAACGTCCCTGGCTAGCAAT +
Preference number: 2 (lower is better)
Translates to: PLEHLVRAPNSSLPS*EWTQGSRATSLASN
Trigger: ATTGCTAGCCAGGGACGTTGCTCTGGAGCCTTGGGTCCATTCCAATGAAGGGAGAGAGGAGTTTGGGGCCCTGACCAGATGCTCTAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR TCA 90 bp CCAGAGCAACGTCCCTGGCTAGCAATGCATGGCCAAGTCAATGATGGATCTAGGGGTTTGGAGAGCGAGTaGGTTGAGGTCTCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: PEQRPWLAMHGQVNDGSRGLESE*VEVSWG
Trigger: GCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACC...CCTAGATCCATCATTGACTTGGCCATGCATTGCTAGCCAGGGACGTTGCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR GCA 90 bp GGAGGAGGATGCGTGGGCTGCAAGGTTTGGAGAGCGAGTGAGTTGAGGTCTCCTCTAAGCCATCTGTCTTaGCCCCTCTTCTCAAAGCCC +
Preference number: 2 (lower is better)
Translates to: GGGCVGCKVWRASELRSPLSHLS*PLFSKP
Trigger: GGGCTTTGAGAAGAGGGGGCAAGACAGATGGCTTAG...AGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCAGCCCACGCATCCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR GCA 90 bp TCAATGTTTTGTTGGAGGGGCCAGCAAGTGAACGAACGGCCAGCATTCAGGGCACCAAAGCCCTTCTGGTaGCTGAGCGGCTTGCTGGGT +
Preference number: 2 (lower is better)
Translates to: SMFCWRGQQVNERPAFRAPKPFW*LSGLLG
Trigger: ACCCAGCAAGCCGCTCAGGCACCAGAAGGGCTTTGG...TGCCCTGAATGCTGGCCGTTCGTTCACTTGCTGGCCCCTCCAACAAAACATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR CCA 90 bp TCCTCTCTCCCTTCATTGGAATGGACCCAAGGCTCCAGAGCAACGTCCCTGGCTGTGGAAAGAGGGGATTaGTGGGAGGAATGGCAAGGC +
Preference number: 2 (lower is better)
Translates to: SSLPSLEWTQGSRATSLAVERGD*WEEWQG
Trigger: GCCTTGCCATTCCTCCCACCAATCCCCTCTTTCCAC...AGCCAGGGACGTTGCTCTGGAGCCTTGGGTCCATTCCAATGAAGGGAGAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR CCA 90 bp GTGGGCTGCAAGGTTTGGAGAGCGAGTGAGTTGAGGTCTCCTGGGGCTTCTGGCAGTCTGTGGTTCTCCTaGAAGTGGAAAGAGGGGATT +
Preference number: 2 (lower is better)
Translates to: VGCKVWRASELRSPGASGSLWFS*KWKEGI
Trigger: AATCCCCTCTTTCCACTTCCAGGAGAACCACAGACT...GCCAGAAGCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCAGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR CCA 90 bp TCCTCTCTCCCTTCATTGGAATGGACCCAAGGCTCCAGAGCAACGTCCCTGGCTTTGCTGGGTCAGTTTTaGAAACCCTGGGGCTGTGCT +
Preference number: 2 (lower is better)
Translates to: SSLPSLEWTQGSRATSLALLGQF*KPWGCA
Trigger: AGCACAGCCCCAGGGTTTCCAAAACTGACCCAGCAA...AGCCAGGGACGTTGCTCTGGAGCCTTGGGTCCATTCCAATGAAGGGAGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR TCA 90 bp CTGCCCACATCCCATCCACTAGAGCATCTGGTCAGGGCCCCAAACTCCTCTCTCAGTCTAAGGCAAAAATaGACCAGGGTTCTAGGGGCT +
Preference number: 2 (lower is better)
Translates to: LPTSHPLEHLVRAPNSSLSLRQK*TRVLGA
Trigger: AGCCCCTAGAACCCTGGTTCATTTTTGCCTTAGACT...GAGAGAGGAGTTTGGGGCCCTGACCAGATGCTCTAGTGGATGGGATGTGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR TCA 90 bp CTAAGCAATTTTCACCAATGGCTAAGCCATCTGTCTTGCCCCCTCTTCTCAAAGCAAGGCAGGGAGCCCTaGTCCCATTGCCCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: LSNFHQWLSHLSCPLFSKQGREP*SHCPPS
Trigger: AGAGGGAGGGCAATGGGATCAGGGCTCCCTGCCTTG...CTTTGAGAAGAGGGGGCAAGACAGATGGCTTAGCCATTGGTGAAAATTGCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR GCA 90 bp CTGCCCACATCCCATCCACTAGAGCATCTGGTCAGGGCCCCAAACTCCTCTCTCCGTGGCATGGAGGGTTaGAAAAGTCTAAGGCAAAAA +
Preference number: 2 (lower is better)
Translates to: LPTSHPLEHLVRAPNSSLRGMEG*KSLRQK
Trigger: TTTTTGCCTTAGACTTTTGCAACCCTCCATGCCACG...GAGAGAGGAGTTTGGGGCCCTGACCAGATGCTCTAGTGGATGGGATGTGGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR CCA 90 bp GTTGATCTGAAAGCCCAGAGAAGCTTCCTGTTCCTTCAACAGTCTTTGGGGTCAGCGCTATCAGTGGCTTaGTCAAGCTCTGCCCCTGGC +
Preference number: 2 (lower is better)
Translates to: VDLKAQRSFLFLQQSLGSALSVA*SSSAPG
Trigger: GCCAGGGGCAGAGCTTGACCAAGCCACTGATAGCGC...TGACCCCAAAGACTGTTGAAGGAACAGGAAGCTTCTCTGGGCTTTCAGATCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR CCA 90 bp TCCTCTCTCCCTTCATTGGAATGGACCCAAGGCTCCAGAGCAACGTCCCTGGCTAAGGCATCTAATCCGTaGCATGGAGGGTTGCAAAAG +
Preference number: 2 (lower is better)
Translates to: SSLPSLEWTQGSRATSLAKASNP*HGGLQK
Trigger: CTTTTGCAACCCTCCATGCCACGGATTAGATGCCTT...AGCCAGGGACGTTGCTCTGGAGCCTTGGGTCCATTCCAATGAAGGGAGAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR TCA 90 bp CTGCCCACATCCCATCCACTAGAGCATCTGGTCAGGGCCCCAAACTCCTCTCTCAACATCTGCACATTTTaGGATTTCATGGCACATGAC +
Preference number: 2 (lower is better)
Translates to: LPTSHPLEHLVRAPNSSLNICTF*DFMAHD
Trigger: GTCATGTGCCATGAAATCTCAAAATGTGCAGATGTT...GAGAGAGGAGTTTGGGGCCCTGACCAGATGCTCTAGTGGATGGGATGTGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR TCA 90 bp TGTTTTACCCTTCCCTTTACCTATCCTGCTCCCACTAGTAACAGTGCAATAGGCGGTGGGCAGATCACCTaGGGTCAGGGATTCAAGACC +
Preference number: 2 (lower is better)
Translates to: CFTLPFTYPAPTSNSAIGGGQIT*GQGFKT
Trigger: GGTCTTGAATCCCTGACCTCAGGTGATCTGCCCACC...GCCTATTGCACTGTTACTAGTGGGAGCAGGATAGGTAAAGGGAAGGGTAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR CCA 90 bp CTCATAATACCCCCTTATGCTTCACTTCTCAAACAGGGTACAATGTATCACCTGAGCTGTGCAAGCATCTaGCACCCAGCCCCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: LIIPPYASLLKQGTMYHLSCASI*HPAPGP
Trigger: TGGGCCTGGGGCTGGGTGCCAGATGCTTGCACAGCT...CAGGTGATACATTGTACCCTGTTTGAGAAGTGAAGCATAAGGGGGTATTATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR CCA 90 bp TTGCCCATCAGCTCTCTAGTCTGGGTGCACCTCCTTACCCCATACCAGCTGGGCTTCTCATCTCTAAAATaGGATGGTCACAGCATAGCT +
Preference number: 2 (lower is better)
Translates to: LPISSLVWVHLLTPYQLGFSSLK*DGHSIA
Trigger: AGCTATGCTGTGACCATCCCATTTTAGAGATGAGAA...GCCCAGCTGGTATGGGGTAAGGAGGTGCACCCAGACTAGAGAGCTGATGGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR TCA 90 bp AACAGTCTTTGGGGTCAAAAGATCTTATGCGCCTACAGAAAGTTCTTAGAGCTCGGTTTGGAGAGCGAGTaGGTTGAGGTCTCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: NSLWGQKILCAYRKFLELGLESE*VEVSWG
Trigger: GCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACC...GAGCTCTAAGAACTTTCTGTAGGCGCATAAGATCTTTTGACCCCAAAGACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR TCA 90 bp GGATCTAATTTGATGAGTATTGCCCATCAGCTCTCTAGTCTGGGTGCACCTCCTCTAGCCCCAAGGCCCTaGGTATTTATGGGACAAAAG +
Preference number: 2 (lower is better)
Translates to: GSNLMSIAHQLSSLGAPPLAPRP*VFMGQK
Trigger: CTTTTGTCCCATAAATACTCAGGGCCTTGGGGCTAG...AGGAGGTGCACCCAGACTAGAGAGCTGATGGGCAATACTCATCAAATTAGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR GCA 90 bp TGTTTTACCCTTCCCTTTACCTATCCTGCTCCCACTAGTAACAGTGCAATAGGCCTAAGCCATCTGTCTTaGCCCCTCTTCTCAAAGCCC +
Preference number: 2 (lower is better)
Translates to: CFTLPFTYPAPTSNSAIGLSHLS*PLFSKP
Trigger: GGGCTTTGAGAAGAGGGGGCAAGACAGATGGCTTAG...GCCTATTGCACTGTTACTAGTGGGAGCAGGATAGGTAAAGGGAAGGGTAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR CCA 90 bp GTTGATCTGAAAGCCCAGAGAAGCTTCCTGTTCCTTCAACAGTCTTTGGGGTCAGAATGGCAAGGCCAGTaGTACCCAGGTAGAAGTTCT +
Preference number: 2 (lower is better)
Translates to: VDLKAQRSFLFLQQSLGSEWQGQ*YPGRSS
Trigger: AGAACTTCTACCTGGGTACCACTGGCCTTGCCATTC...TGACCCCAAAGACTGTTGAAGGAACAGGAAGCTTCTCTGGGCTTTCAGATCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR CAA 90 bp CTATCATGTACCTTACTTGGTAATTACCGATCACTCAATGTTTTGTaGGAGGGGCCAGCAAGTGAACGAACGGCCAGCATTCAGGGCATC +
Preference number: 2 (lower is better)
Translates to: LSCTLLGNYRSLNVL*EGPASERTASIQGI
Trigger: GATGCCCTGAATGCTGGCCGTTCGTTCACTTGCTGGCCCCTCCAACAAAACATTGAGTGATCGGTAATTACCAAGTAAGGTACATGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR TCA 90 bp CGCCTACAGAAAGTTCTTAGAGCTCAAAACAACATCTTACAGGTTTTTGGCTTCCCTGCAGCATTGACTTaGGGAAGGAGTCCGGGGTCA +
Preference number: 2 (lower is better)
Translates to: RLQKVLRAQNNILQVFGFPAALT*GRSPGS
Trigger: TGACCCCGGACTCCTTCCTCAAGTCAATGCTGCAGG...GAAGCCAAAAACCTGTAAGATGTTGTTTTGAGCTCTAAGAACTTTCTGTAGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR CCA 90 bp GCTTCACAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAAGTGGCGAAAGAGGGGATTGGTaGGAGGAATGGCAAGGCCAG +
Preference number: 2 (lower is better)
Translates to: ASQIDIVFDSQQPHDRSGERGDW*EEWQGQ
Trigger: CTGGCCTTGCCATTCCTCCCACCAATCCCCTCTTTC...GCCACTTCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTGTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR TCA 90 bp TGGGGTCTTCAGTTAGTTAGGTTGTTTGTGTTTCCTTTGCCCCCTTCACCTTCCACAGCTGAGTGGCTATaGGAAAAAGATGCTGTCAGT +
Preference number: 2 (lower is better)
Translates to: WGLQLVRLFVFPLPPSPSTAEWL*EKDAVS
Trigger: ACTGACAGCATCTTTTTCTCATAGCCACTCAGCTGT...GGAAGGTGAAGGGGGCAAAGGAAACACAAACAACCTAACTAACTGAAGACCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR GCA 90 bp CAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAAGTGGCCCACGTCTCACACCAGGAACCTaGAGCATTGACTTGAGGAAG +
Preference number: 2 (lower is better)
Translates to: QIDIVFDSQQPHDRSGPRLTPGT*SIDLRK
Trigger: CTTCCTCAAGTCAATGCTGCAGGTTCCTGGTGTGAG...ACGTGGGCCACTTCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR GCA 90 bp CAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAAGTGGCCCACGTGGCTTGGTCAAGCTCTaGCCCTGGCTAAGCAATTTT +
Preference number: 2 (lower is better)
Translates to: QIDIVFDSQQPHDRSGPRGLVKL*PWLSNF
Trigger: AAAATTGCTTAGCCAGGGGCAGAGCTTGACCAAGCC...ACGTGGGCCACTTCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR CCA 90 bp CAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAAGTGGCCCACGTGAATGGCAAGGCCAGTaGTACCCAGGTAGAAGTTCT +
Preference number: 2 (lower is better)
Translates to: QIDIVFDSQQPHDRSGPREWQGQ*YPGRSS
Trigger: AGAACTTCTACCTGGGTACCACTGGCCTTGCCATTC...ACGTGGGCCACTTCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR CCA 90 bp CGCCTACAGAAAGTTCTTAGAGCTCAAAACAACATCTTACAGGTTTTTGGCTTCGTGGAAAGAGGGGATTaGTGGGAGGAATGGCAAGGC +
Preference number: 2 (lower is better)
Translates to: RLQKVLRAQNNILQVFGFVERGD*WEEWQG
Trigger: GCCTTGCCATTCCTCCCACCAATCCCCTCTTTCCAC...GAAGCCAAAAACCTGTAAGATGTTGTTTTGAGCTCTAAGAACTTTCTGTAGGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR CCA 90 bp CTCATAATACCCCCTTATGCTTCACTTCTCAAACAGGGTACAATGTATCACCTGCCCATTTCTCAGACTTaGGGATGCAGACTGAGGCAG +
Preference number: 2 (lower is better)
Translates to: LIIPPYASLLKQGTMYHLPISQT*GCRLRQ
Trigger: CTGCCTCAGTCTGCATCCCCAAGTCTGAGAAATGGG...CAGGTGATACATTGTACCCTGTTTGAGAAGTGAAGCATAAGGGGGTATTATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR CCA 90 bp TCACAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAAGTGGCCCACCCATTTCTCAGACTTaGGGATGCAGACTGAGGCAG +
Preference number: 2 (lower is better)
Translates to: SQIDIVFDSQQPHDRSGPPISQT*GCRLRQ
Trigger: CTGCCTCAGTCTGCATCCCCAAGTCTGAGAAATGGG...TGGGCCACTTCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR CCA 90 bp TCACAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAAGTGGCCCACTGTCTGACCCCAGTTaGCCCATTTCTCAGACTTGG +
Preference number: 2 (lower is better)
Translates to: SQIDIVFDSQQPHDRSGPLSDPS*PISQTW
Trigger: CCAAGTCTGAGAAATGGGCCAACTGGGGTCAGACAG...TGGGCCACTTCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR TCA 90 bp GGATCTAATTTGATGAGTATTGCCCATCAGCTCTCTAGTCTGGGTGCACCTCCTACATTGAGGCTCAAATaGATTAATTGGCCAAGGCCA +
Preference number: 2 (lower is better)
Translates to: GSNLMSIAHQLSSLGAPPTLRLK*INWPRP
Trigger: TGGCCTTGGCCAATTAATTCATTTGAGCCTCAATGT...AGGAGGTGCACCCAGACTAGAGAGCTGATGGGCAATACTCATCAAATTAGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR GCA 90 bp CAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAAGTGGCCCACGTGCTATGAGAAAAAGATaGTGTCAGTTGCCAAGGGGG +
Preference number: 2 (lower is better)
Translates to: QIDIVFDSQQPHDRSGPRAMRKR*CQLPRG
Trigger: CCCCCTTGGCAACTGACAGCATCTTTTTCTCATAGC...ACGTGGGCCACTTCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR CCA 90 bp GATCTTATGCGCCTACAGAAAGTTCTTAGAGCTCAAAACAACATCTTACAGGTTTATGGGCGCTATCAGTaGCTTGGTCAAGCTCTGCCC +
Preference number: 2 (lower is better)
Translates to: DLMRLQKVLRAQNNILQVYGRYQ*LGQALP
Trigger: GGGCAGAGCTTGACCAAGCCACTGATAGCGCCCATA...AACCTGTAAGATGTTGTTTTGAGCTCTAAGAACTTTCTGTAGGCGCATAAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR CAA 90 bp GTTGATCTGAAAGCCCAGAGAAGCTTCCTGTTCCTTCAACAGTCTTaGGGGTCAAAAGATCTTATGCGCCTACAGAAAGTTCTTAGAGCT +
Preference number: 2 (lower is better)
Translates to: VDLKAQRSFLFLQQS*GSKDLMRLQKVLRA
Trigger: AGCTCTAAGAACTTTCTGTAGGCGCATAAGATCTTTTGACCCCAAAGACTGTTGAAGGAACAGGAAGCTTCTCTGGGCTTTCAGATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR GCA 90 bp CGCCTACAGAAAGTTCTTAGAGCTCAAAACAACATCTTACAGGTTTTTGGCTTCCTCACACCAGGAACCTaGAGCATTGACTTGAGGAAG +
Preference number: 2 (lower is better)
Translates to: RLQKVLRAQNNILQVFGFLTPGT*SIDLRK
Trigger: CTTCCTCAAGTCAATGCTGCAGGTTCCTGGTGTGAG...GAAGCCAAAAACCTGTAAGATGTTGTTTTGAGCTCTAAGAACTTTCTGTAGGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR CCA 90 bp TGGGGGTCAGGTGTGGATAAAGTTGTCTATCATGTACCTTACTTGGTAATTACCGTCAAGCTCTGCCCCTaGCTAAGCAATTTTCACCAA +
Preference number: 2 (lower is better)
Translates to: WGSGVDKVVYHVPYLVITVKLCP*LSNFHQ
Trigger: TTGGTGAAAATTGCTTAGCCAGGGGCAGAGCTTGAC...GGTAATTACCAAGTAAGGTACATGATAGACAACTTTATCCACACCTGACCCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR CCA 90 bp CAAAATGCTTCACAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGATATGGGCGCTATCAGTaGCTTGGTCAAGCTCTGCCC +
Preference number: 2 (lower is better)
Translates to: QNASQIDIVFDSQQPHDRYGRYQ*LGQALP
Trigger: GGGCAGAGCTTGACCAAGCCACTGATAGCGCCCATA...TCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTGTGAAGCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR CCA 90 bp TCACAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAAGTGGCCCAAGTCTGTGGTTCTCCTaGAAGTGGAAAGAGGGGATT +
Preference number: 2 (lower is better)
Translates to: SQIDIVFDSQQPHDRSGPSLWFS*KWKEGI
Trigger: AATCCCCTCTTTCCACTTCCAGGAGAACCACAGACT...TGGGCCACTTCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR CCA 90 bp ACACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCAGGAATCATCACATCCATATaGGCGCTATCAGTGGCTTGG +
Preference number: 2 (lower is better)
Translates to: THLTDLLFTILGPKFYPGIITSI*ALSVAW
Trigger: CCAAGCCACTGATAGCGCCCATATGGATGTGATGAT...TCCTGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR TCA 90 bp TGTTTTACCCTTCCCTTTACCTATCCTGCTCCCACTAGTAACAGTGCAATAGGCAGATTTCATGGCACATaGCCTTTTACATCTTGTACA +
Preference number: 2 (lower is better)
Translates to: CFTLPFTYPAPTSNSAIGRFHGT*PFTSCT
Trigger: TGTACAAGATGTAAAAGGTCATGTGCCATGAAATCT...GCCTATTGCACTGTTACTAGTGGGAGCAGGATAGGTAAAGGGAAGGGTAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR GCA 90 bp GATCTTATGCGCCTACAGAAAGTTCTTAGAGCTCAAAACAACATCTTACAGGTTGCTATGAGAAAAAGATaGTGTCAGTTGCCAAGGGGG +
Preference number: 2 (lower is better)
Translates to: DLMRLQKVLRAQNNILQVAMRKR*CQLPRG
Trigger: CCCCCTTGGCAACTGACAGCATCTTTTTCTCATAGC...AACCTGTAAGATGTTGTTTTGAGCTCTAAGAACTTTCTGTAGGCGCATAAGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR CCA 90 bp CAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAAGTGGCCCACGTCACACATTGTGTAAGTaGGTGAAATGGGATTTCTTG +
Preference number: 2 (lower is better)
Translates to: QIDIVFDSQQPHDRSGPRHTLCK*VKWDFL
Trigger: CAAGAAATCCCATTTCACCCACTTACACAATGTGTG...ACGTGGGCCACTTCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR TCA 90 bp ACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCAGGACAACATTGAGGCTCAAATaGATTAATTGGCCAAGGCCA +
Preference number: 2 (lower is better)
Translates to: TLNRPLVYHFRAKILSRTTLRLK*INWPRP
Trigger: TGGCCTTGGCCAATTAATTCATTTGAGCCTCAATGT...TGTCCTGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR CCA 90 bp CTCATAATACCCCCTTATGCTTCACTTCTCAAACAGGGTACAATGTATCACCTGCACACATTGTGTAAGTaGGTGAAATGGGATTTCTTG +
Preference number: 2 (lower is better)
Translates to: LIIPPYASLLKQGTMYHLHTLCK*VKWDFL
Trigger: CAAGAAATCCCATTTCACCCACTTACACAATGTGTG...CAGGTGATACATTGTACCCTGTTTGAGAAGTGAAGCATAAGGGGGTATTATGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR TCA 72 bp CCCAGCCCCTCACACCAGGAACCTGCAGCATTGACTTaGGGAAGGAGTCCGGGGTCAGGCCAGTCTACCTGT +
Preference number: 3 (lower is better)
Translates to: PSPSHQEPAALT*GRSPGSGQSTC
Trigger: ACAGGTAGACTGGCCTGACCCCGGACTCCTTCCTCAAGTCAATGCTGCAGGTTCCTGGTGTGAGGGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR TCA 72 bp GATGCGTGGGCTGCAAGGTTTGGAGAGCGAGTGAGTTaGGGTCTCCTGGGGCTTCTGGCCAGCCTTCTCCCT +
Preference number: 3 (lower is better)
Translates to: DAWAARFGERVS*GLLGLLASLLP
Trigger: AGGGAGAAGGCTGGCCAGAAGCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCAGCCCACGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR TCA 72 bp AGGAGGATGCGTGGGCTGCAAGGTTTGGAGAGCGAGTaGGTTGAGGTCTCCTGGGGCTTCTGGCCAGCCTTC +
Preference number: 3 (lower is better)
Translates to: RRMRGLQGLESE*VEVSWGFWPAF
Trigger: GAAGGCTGGCCAGAAGCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCAGCCCACGCATCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR CCA 72 bp TGCCTGAGCGGCTTGCTGGGTCAGTTTTGGAAACCCTaGGGCTGTGCTGTCCCCACTCACACAGCTGTGCAA +
Preference number: 3 (lower is better)
Translates to: CLSGLLGQFWKP*GCAVPTHTAVQ
Trigger: TTGCACAGCTGTGTGAGTGGGGACAGCACAGCCCCAGGGTTTCCAAAACTGACCCAGCAAGCCGCTCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR CCA 72 bp GTCAGGGCCCCAAACTCCTCTCTCCCTTCATTGGAATaGACCCAAGGCTCCAGAGCAACGTCCCTGGCTAGC +
Preference number: 3 (lower is better)
Translates to: VRAPNSSLPSLE*TQGSRATSLAS
Trigger: GCTAGCCAGGGACGTTGCTCTGGAGCCTTGGGTCCATTCCAATGAAGGGAGAGAGGAGTTTGGGGCCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR CAA 90 bp TTGCCAAGGGGGCCCCACGGGTATCATCACATCCATATGGGCGCTATCAGTGGCACCTGCAGCATTGACTaGAGGAAGGAGTCCGGGGTC +
Preference number: 3 (lower is better)
Translates to: LPRGPHGYHHIHMGAISGTCSID*RKESGV
Trigger: GACCCCGGACTCCTTCCTCAAGTCAATGCTGCAGGT...GCCACTGATAGCGCCCATATGGATGTGATGATACCCGTGGGGCCCCCTTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR TCA 72 bp CCAGCCTCAGCTCATGCACCAAAACCCATCCAACCATaGGACCACATCAGCCCCATGTCCTACCTCGCTCTC +
Preference number: 3 (lower is better)
Translates to: PASAHAPKPIQP*DHISPMSYLAL
Trigger: GAGAGCGAGGTAGGACATGGGGCTGATGTGGTCTCATGGTTGGATGGGTTTTGGTGCATGAGCTGAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR GCA 72 bp GTGAGAGTGCTGGGACTCACGCCCAGCCTCAGCTCATaGACCAAAACCCATCCAACCATGAGACCACATCAG +
Preference number: 3 (lower is better)
Translates to: VRVLGLTPSLSS*TKTHPTMRPHQ
Trigger: CTGATGTGGTCTCATGGTTGGATGGGTTTTGGTGCATGAGCTGAGGCTGGGCGTGAGTCCCAGCACTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR CAA 90 bp GGAGGAGGATGCGTGGGCTGCAAGGTTTGGAGAGCGAGTGAGTTGAGGTCTCCTCTCCCTGATAGATTTTaGTCACTGGGACCCTCTCTA +
Preference number: 3 (lower is better)
Translates to: GGGCVGCKVWRASELRSPLPDRF*SLGPSL
Trigger: TAGAGAGGGTCCCAGTGACAAAAATCTATCAGGGAG...AGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCAGCCCACGCATCCTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR CAA 90 bp CTGGCCAGCCTTCTCCCTGATAGATTTTTGTCACTGGGACCCTCTCTAGAGTCTGCTAAGCCATCTGTCTaGCCCCCTCTTCTCAAAGCC +
Preference number: 3 (lower is better)
Translates to: LASLLPDRFLSLGPSLESAKPSV*PPLLKA
Trigger: GGCTTTGAGAAGAGGGGGCAAGACAGATGGCTTAGC...AGACTCTAGAGAGGGTCCCAGTGACAAAAATCTATCAGGGAGAAGGCTGGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR CAA 90 bp CCAGAGCAACGTCCCTGGCTAGCAATGCATGGCCAAGTCAATGATGGATCTAGGGGCCAAGGCCACACATaGTGTAAGTGGGTGAAATGG +
Preference number: 3 (lower is better)
Translates to: PEQRPWLAMHGQVNDGSRGQGHT*CKWVKW
Trigger: CCATTTCACCCACTTACACAATGTGTGGCCTTGGCC...CCTAGATCCATCATTGACTTGGCCATGCATTGCTAGCCAGGGACGTTGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR CCA 72 bp CCACGGGTATCATCACATCCATATGGGCGCTATCAGTaGCTTGGTCAAGCTCTGCCCCTGGCTAAGCAATTT +
Preference number: 3 (lower is better)
Translates to: PRVSSHPYGRYQ*LGQALPLAKQF
Trigger: AAATTGCTTAGCCAGGGGCAGAGCTTGACCAAGCCACTGATAGCGCCCATATGGATGTGATGATACCCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR CCA 72 bp CATTGGAATGGACCCAAGGCTCCAGAGCAACGTCCCTaGCTAGCAATGCATGGCCAAGTCAATGATGGATCT +
Preference number: 3 (lower is better)
Translates to: HWNGPKAPEQRP*LAMHGQVNDGS
Trigger: AGATCCATCATTGACTTGGCCATGCATTGCTAGCCAGGGACGTTGCTCTGGAGCCTTGGGTCCATTCCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR CAA 90 bp CTGCCCACATCCCATCCACTAGAGCATCTGGTCAGGGCCCCAAACTCCTCTCTCATGACCTTTTACATCTaGTACACACTTAACCGACCT +
Preference number: 3 (lower is better)
Translates to: LPTSHPLEHLVRAPNSSLMTFYI*YTLNRP
Trigger: AGGTCGGTTAAGTGTGTACAAGATGTAAAAGGTCAT...GAGAGAGGAGTTTGGGGCCCTGACCAGATGCTCTAGTGGATGGGATGTGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR TCA 72 bp CCGATCACTCAATGTTTTGTTGGAGGGGCCAGCAAGTaGACGAACGGCCAGCATTCAGGGCATCAAAGGATT +
Preference number: 3 (lower is better)
Translates to: PITQCFVGGASK*TNGQHSGHQRI
Trigger: AATCCTTTGATGCCCTGAATGCTGGCCGTTCGTTCACTTGCTGGCCCCTCCAACAAAACATTGAGTGATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR GCA 72 bp ATCCATATGGGCGCTATCAGTGGCTTGGTCAAGCTCTaGCCCTGGCTAAGCAATTTTCACCAATGGCTAAGC +
Preference number: 3 (lower is better)
Translates to: IHMGAISGLVKL*PWLSNFHQWLS
Trigger: GCTTAGCCATTGGTGAAAATTGCTTAGCCAGGGGCAGAGCTTGACCAAGCCACTGATAGCGCCCATATGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR CAA 90 bp CAGTGCAATAGGCATTCTCATAATACCCCCTTATGCTTCACTTCTCAAACAGGGAGTGGAAAGAGGGGATaGGTGGGAGGAATGGCAAGG +
Preference number: 3 (lower is better)
Translates to: QCNRHSHNTPLCFTSQTGSGKRG*VGGMAR
Trigger: CCTTGCCATTCCTCCCACCAATCCCCTCTTTCCACT...CCCTGTTTGAGAAGTGAAGCATAAGGGGGTATTATGAGAATGCCTATTGCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR-3UTR CAA 90 bp CAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAAGTGGCCCACGTAGTGGAAAGAGGGGATaGGTGGGAGGAATGGCAAGG +
Preference number: 3 (lower is better)
Translates to: QIDIVFDSQQPHDRSGPRSGKRG*VGGMAR
Trigger: CCTTGCCATTCCTCCCACCAATCCCCTCTTTCCACT...ACGTGGGCCACTTCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR CAA 90 bp CAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAAGTGGCCCACGTGCCCATTTCTCAGACTaGGGGATGCAGACTGAGGCA +
Preference number: 3 (lower is better)
Translates to: QIDIVFDSQQPHDRSGPRAHFSD*GMQTEA
Trigger: TGCCTCAGTCTGCATCCCCAAGTCTGAGAAATGGGC...ACGTGGGCCACTTCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR CAA 90 bp AACAGTCTTTGGGGTCAAAAGATCTTATGCGCCTACAGAAAGTTCTTAGAGCTCGCTAAGCCATCTGTCTaGCCCCCTCTTCTCAAAGCC +
Preference number: 3 (lower is better)
Translates to: NSLWGQKILCAYRKFLELAKPSV*PPLLKA
Trigger: GGCTTTGAGAAGAGGGGGCAAGACAGATGGCTTAGC...GAGCTCTAAGAACTTTCTGTAGGCGCATAAGATCTTTTGACCCCAAAGACTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR CAA 90 bp ACTCACGCCCAGCCTCAGCTCATGCACCAAAACCCATCCAACCATGAGACCACATATCATGTACCTTACTaGGTAATTACCGATCACTCA +
Preference number: 3 (lower is better)
Translates to: THAQPQLMHQNPSNHETTYHVPY*VITDHS
Trigger: TGAGTGATCGGTAATTACCAAGTAAGGTACATGATA...TGTGGTCTCATGGTTGGATGGGTTTTGGTGCATGAGCTGAGGCTGGGCGTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR CCA 72 bp AAGCCCAGAGAAGCTTCCTGTTCCTTCAACAGTCTTTaGGGTCAAAAGATCTTATGCGCCTACAGAAAGTTC +
Preference number: 3 (lower is better)
Translates to: KPREASCSFNSL*GQKILCAYRKF
Trigger: GAACTTTCTGTAGGCGCATAAGATCTTTTGACCCCAAAGACTGTTGAAGGAACAGGAAGCTTCTCTGGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR-3UTR CAA 90 bp CAGTGCAATAGGCATTCTCATAATACCCCCTTATGCTTCACTTCTCAAACAGGGCAGGTGTGGATAAAGTaGTCTATCATGTACCTTACT +
Preference number: 3 (lower is better)
Translates to: QCNRHSHNTPLCFTSQTGQVWIK*SIMYLT
Trigger: AGTAAGGTACATGATAGACAACTTTATCCACACCTG...CCCTGTTTGAGAAGTGAAGCATAAGGGGGTATTATGAGAATGCCTATTGCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR TCA 72 bp GTTCAACATCTGCACATTTTGAGATTTCATGGCACATaGCCTTTTACATCTTGTACACACTTAACCGACCTC +
Preference number: 3 (lower is better)
Translates to: VQHLHILRFHGT*PFTSCTHLTDL
Trigger: GAGGTCGGTTAAGTGTGTACAAGATGTAAAAGGTCATGTGCCATGAAATCTCAAAATGTGCAGATGTTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR TCA 90 bp CTCCCCGTGGGGTCTCAGGCCCTAGGCCAGGGCTCAACAGACACAGGCAGTGGGGGAGAGCGAGTGAGTTaGGGTCTCCTGGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LPVGSQALGQGSTDTGSGGERVS*GLLGLL
Trigger: CAGAAGCCCCAGGAGACCTCAACTCACTCGCTCTCC...CCCACTGCCTGTGTCTGTTGAGCCCTGGCCTAGGGCCTGAGACCCCACGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp GGGGTCTGGGCCCTGCCAAGGCAGGGAGCCCTGATCCCATTGCCCTCCCTCTCCGTCTCCACTCGCGGCTaGTGCATCATGTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: GVWALPRQGALIPLPSLSVSTRG*CIMSGA
Trigger: TGCACCAGACATGATGCAGCAGCCGCGAGTGGAGAC...GGAGAGGGAGGGCAATGGGATCAGGGCTCCCTGCCTTGGCAGGGCCCAGACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp CCTCCCTCTCCCCGTGGGGTCTCAGGCCCTAGGCCAGGGCTCAACAGACACAGGGGAGGATGCGTGGGCTaGAAGGTTTGGAGAGCGAGT +
Preference number: 4 (lower is better)
Translates to: PPSPRGVSGPRPGLNRHRGGCVG*KVWRAS
Trigger: ACTCGCTCTCCAAACCTTGCAGCCCACGCATCCTCC...CCTGTGTCTGTTGAGCCCTGGCCTAGGGCCTGAGACCCCACGGGGAGAGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp GGGGTCTGGGCCCTGCCAAGGCAGGGAGCCCTGATCCCATTGCCCTCCCTCTCCGGTCTTGAAGATGCCTaGGACCTCTGGGCAGTTACC +
Preference number: 4 (lower is better)
Translates to: GVWALPRQGALIPLPSLSGLEDA*DLWAVT
Trigger: GGTAACTGCCCAGAGGTCCCAGGCATCTTCAAGACC...GGAGAGGGAGGGCAATGGGATCAGGGCTCCCTGCCTTGGCAGGGCCCAGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp CCTCCCTCTCCCCGTGGGGTCTCAGGCCCTAGGCCAGGGCTCAACAGACACAGGAGGACTCAGATGGCCTaGCCTTGCCACTGGCAACTG +
Preference number: 4 (lower is better)
Translates to: PPSPRGVSGPRPGLNRHRRTQMA*PCHWQL
Trigger: CAGTTGCCAGTGGCAAGGCCAGGCCATCTGAGTCCT...CCTGTGTCTGTTGAGCCCTGGCCTAGGGCCTGAGACCCCACGGGGAGAGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR TCA 90 bp TGCAAGGTTTGGAGAGCGAGTGAGTTGAGGTCTCCTGGGGCTTCTGGCCAGCCTCCCAGCCATGCCTCGTaGCCCAGGCTGACCAGGGCA +
Preference number: 4 (lower is better)
Translates to: CKVWRASELRSPGASGQPPSHAS*PRLTRA
Trigger: TGCCCTGGTCAGCCTGGGTCACGAGGCATGGCTGGG...AGGCTGGCCAGAAGCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR TCA 90 bp CTCCCTCTCCCCGTGGGGTCTCAGGCCCTAGGCCAGGGCTCAACAGACACAGGCAGGAACCTGCAGCATTaGCTTGAGGAAGGAGTCCGG +
Preference number: 4 (lower is better)
Translates to: LPLPVGSQALGQGSTDTGRNLQH*LEEGVR
Trigger: CCGGACTCCTTCCTCAAGTCAATGCTGCAGGTTCCT...GCCTGTGTCTGTTGAGCCCTGGCCTAGGGCCTGAGACCCCACGGGGAGAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp TGCAAGGTTTGGAGAGCGAGTGAGTTGAGGTCTCCTGGGGCTTCTGGCCAGCCTCCCCACAGCAGGCGCTaGAGCGGTTGCCGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: CKVWRASELRSPGASGQPPHSRR*SGCRQF
Trigger: GAACTGGCGGCAACCGCTGCAGCGCCTGCTGTGGGG...AGGCTGGCCAGAAGCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp CCTCCCTCTCCCCGTGGGGTCTCAGGCCCTAGGCCAGGGCTCAACAGACACAGGCTGAGGCAGGAGAATTaGTTGGACCTGGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: PPSPRGVSGPRPGLNRHRLRQEN*LDLGGG
Trigger: TCCACCTCCCAGGTCCAAGCAATTCTCCTGCCTCAG...CCTGTGTCTGTTGAGCCCTGGCCTAGGGCCTGAGACCCCACGGGGAGAGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp TTGCCCATCAGCTCTCTAGTCTGGGTGCACCTCCTTACCCCATACCAGCTGGGCGCGCCCAGGACGGCCTaGCAGGCAGATCCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: LPISSLVWVHLLTPYQLGAPRTA*QADPSP
Trigger: GGGACTTGGATCTGCCTGCCAGGCCGTCCTGGGCGC...GCCCAGCTGGTATGGGGTAAGGAGGTGCACCCAGACTAGAGAGCTGATGGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp CTCCCTCTCCCCGTGGGGTCTCAGGCCCTAGGCCAGGGCTCAACAGACACAGGCCAAGGCTCAGCAGTGTaGAGAAGAGCAGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LPLPVGSQALGQGSTDTGQGSAV*RRAAGR
Trigger: CCTTCCTGCTGCTCTTCTCCACACTGCTGAGCCTTG...GCCTGTGTCTGTTGAGCCCTGGCCTAGGGCCTGAGACCCCACGGGGAGAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp CCTCCCTCTCCCCGTGGGGTCTCAGGCCCTAGGCCAGGGCTCAACAGACACAGGAGAATTGCTTGGACCTaGGAGGTGGAGCGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: PPSPRGVSGPRPGLNRHRRIAWT*EVERSE
Trigger: CTCACTGCGCTCCACCTCCCAGGTCCAAGCAATTCT...CCTGTGTCTGTTGAGCCCTGGCCTAGGGCCTGAGACCCCACGGGGAGAGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR TCA 90 bp CTCCCTCTCCCCGTGGGGTCTCAGGCCCTAGGCCAGGGCTCAACAGACACAGGCAAACCCATCCAACCATaGGACCACATCAGCCCCATG +
Preference number: 4 (lower is better)
Translates to: LPLPVGSQALGQGSTDTGKPIQP*DHISPM
Trigger: CATGGGGCTGATGTGGTCTCATGGTTGGATGGGTTT...GCCTGTGTCTGTTGAGCCCTGGCCTAGGGCCTGAGACCCCACGGGGAGAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR GCA 90 bp TTGCCAAGGGGGCCCCACGGGTATCATCACATCCATATGGGCGCTATCAGTGGCAGGCGCTGCAGCGGTTaGCGCCAGTTCGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LPRGPHGYHHIHMGAISGRRCSG*RQFEVL
Trigger: GAGCACCTCGAACTGGCGGCAACCGCTGCAGCGCCT...GCCACTGATAGCGCCCATATGGATGTGATGATACCCGTGGGGCCCCCTTGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp CCTCCCTCTCCCCGTGGGGTCTCAGGCCCTAGGCCAGGGCTCAACAGACACAGGGGAAGGACTGGACCTTaGGTTTTGGCACTGATGCTG +
Preference number: 4 (lower is better)
Translates to: PPSPRGVSGPRPGLNRHRGRTGP*VLALML
Trigger: CAGCATCAGTGCCAAAACCCAAGGTCCAGTCCTTCC...CCTGTGTCTGTTGAGCCCTGGCCTAGGGCCTGAGACCCCACGGGGAGAGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp CTCCCTCTCCCCGTGGGGTCTCAGGCCCTAGGCCAGGGCTCAACAGACACAGGCCTGCTGCATCATGTCTaGTGCACCTCTGGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: LPLPVGSQALGQGSTDTGLLHHV*CTSGQL
Trigger: TAACTGCCCAGAGGTGCACCAGACATGATGCAGCAG...GCCTGTGTCTGTTGAGCCCTGGCCTAGGGCCTGAGACCCCACGGGGAGAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380585.2
3UTR CAA 72 bp GCCCTTCTGGTGCCTGAGCGGCTTGCTGGGTCAGTTTaGGAAACCCTGGGGCTGTGCTGTCCCCACTCACAC +
Preference number: 4 (lower is better)
Translates to: ALLVPERLAGSV*ETLGLCCPHSH
Trigger: GTGTGAGTGGGGACAGCACAGCCCCAGGGTTTCCAAAACTGACCCAGCAAGCCGCTCAGGCACCAGAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR TCA 90 bp GGAGGAGGATGCGTGGGCTGCAAGGTTTGGAGAGCGAGTGAGTTGAGGTCTCCTCAAGGCAGGGAGCCCTaGTCCCATTGCCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GGGCVGCKVWRASELRSPQGREP*SHCPPS
Trigger: AGAGGGAGGGCAATGGGATCAGGGCTCCCTGCCTTG...AGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCAGCCCACGCATCCTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp ACACCAGGAACCTGCAGCATTGACTTGAGGAAGGAGTCCGGGGTCAGGCCAGTCGCCGCCAGTTCGAGGTaGTCCACCACTGGATCCAGC +
Preference number: 4 (lower is better)
Translates to: TPGTCSIDLRKESGVRPVAASSR*STTGSS
Trigger: GCTGGATCCAGTGGTGGAGCACCTCGAACTGGCGGC...GACTGGCCTGACCCCGGACTCCTTCCTCAAGTCAATGCTGCAGGTTCCTGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR TCA 90 bp TGCAAGGTTTGGAGAGCGAGTGAGTTGAGGTCTCCTGGGGCTTCTGGCCAGCCTAGAGGGCCAGGGTCTTaGAGATGCCTGGGACCTCTG +
Preference number: 4 (lower is better)
Translates to: CKVWRASELRSPGASGQPRGPGS*RCLGPL
Trigger: CAGAGGTCCCAGGCATCTTCAAGACCCTGGCCCTCT...AGGCTGGCCAGAAGCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR TCA 90 bp TTGCCAAGGGGGCCCCACGGGTATCATCACATCCATATGGGCGCTATCAGTGGCGGTGAGTCATGGAGGTaGGGAGGCCCACAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LPRGPHGYHHIHMGAISGGESWR*GGPQGS
Trigger: TGAGCCTTGTGGGCCTCCTCACCTCCATGACTCACC...GCCACTGATAGCGCCCATATGGATGTGATGATACCCGTGGGGCCCCCTTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR TCA 90 bp ACACCAGGAACCTGCAGCATTGACTTGAGGAAGGAGTCCGGGGTCAGGCCAGTCGGAGGGGCCAGCAAGTaGACGAACGGCCAGCATTCA +
Preference number: 4 (lower is better)
Translates to: TPGTCSIDLRKESGVRPVGGASK*TNGQHS
Trigger: TGAATGCTGGCCGTTCGTTCACTTGCTGGCCCCTCC...GACTGGCCTGACCCCGGACTCCTTCCTCAAGTCAATGCTGCAGGTTCCTGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR GCA 90 bp GGGGGCCCCACGGGTATCATCACATCCATATGGGCGCTATCAGTGGCTTGGTCAAGTCATGTTGCTTCCTaGAGCGCCCAGGACGGCCTG +
Preference number: 4 (lower is better)
Translates to: GGPTGIITSIWALSVAWSSHVAS*SAQDGL
Trigger: CAGGCCGTCCTGGGCGCTGCAGGAAGCAACATGACT...TGACCAAGCCACTGATAGCGCCCATATGGATGTGATGATACCCGTGGGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR GCA 90 bp TGCAAGGTTTGGAGAGCGAGTGAGTTGAGGTCTCCTGGGGCTTCTGGCCAGCCTCTGCATCATGTCTGGTaGACCTGGGGAGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: CKVWRASELRSPGASGQPLHHVW*TWGEGQ
Trigger: CTGGCCCTCTCCCCAGGTGCACCAGACATGATGCAG...AGGCTGGCCAGAAGCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR GCA 90 bp CCTCCCTCTCCCCGTGGGGTCTCAGGCCCTAGGCCAGGGCTCAACAGACACAGGGCAGTGGGATGGGGTTaGCCTTCTATTGATCCAAAT +
Preference number: 4 (lower is better)
Translates to: PPSPRGVSGPRPGLNRHRAVGWG*PSIDPN
Trigger: ATTTGGATCAATAGAAGGGCAACCCCATCCCACTGC...CCTGTGTCTGTTGAGCCCTGGCCTAGGGCCTGAGACCCCACGGGGAGAGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp CCTCCCTCTCCCCGTGGGGTCTCAGGCCCTAGGCCAGGGCTCAACAGACACAGGCTAATTACTGCCCCTTaGGCCCATCTGCCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: PPSPRGVSGPRPGLNRHRLITAP*AHLPCF
Trigger: AAAACAAGGCAGATGGGCCCAAGGGGCAGTAATTAG...CCTGTGTCTGTTGAGCCCTGGCCTAGGGCCTGAGACCCCACGGGGAGAGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR TCA 90 bp TGCAAGGTTTGGAGAGCGAGTGAGTTGAGGTCTCCTGGGGCTTCTGGCCAGCCTCCTGCAGCATTGACTTaGGGAAGGAGTCCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: CKVWRASELRSPGASGQPPAALT*GRSPGS
Trigger: TGACCCCGGACTCCTTCCTCAAGTCAATGCTGCAGG...AGGCTGGCCAGAAGCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp GTGGGCTGCAAGGTTTGGAGAGCGAGTGAGTTGAGGTCTCCTGGGGCTTCTGGCGTGGAAAGAGGGGATTaGTGGGAGGAATGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: VGCKVWRASELRSPGASGVERGD*WEEWQG
Trigger: GCCTTGCCATTCCTCCCACCAATCCCCTCTTTCCAC...GCCAGAAGCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCAGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp GTGGGCTGCAAGGTTTGGAGAGCGAGTGAGTTGAGGTCTCCTGGGGCTTCTGGCCAGTTTTGGAAACCCTaGGGCTGTGCTGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: VGCKVWRASELRSPGASGQFWKP*GCAVPT
Trigger: AGTGGGGACAGCACAGCCCCAGGGTTTCCAAAACTG...GCCAGAAGCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCAGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR TCA 90 bp CATCACATCCATATGGGCGCTATCAGTGGCTTGGTCAAGCTCTGCCCCTGGCTAGGAGAGCGAGTGAGTTaGGGTCTCCTGGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: HHIHMGAISGLVKLCPWLGERVS*GLLGLL
Trigger: CAGAAGCCCCAGGAGACCTCAACTCACTCGCTCTCC...TAGCCAGGGGCAGAGCTTGACCAAGCCACTGATAGCGCCCATATGGATGTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR TCA 90 bp GTGCCTGAGCGGCTTGCTGGGTCAGTTTTGGAAACCCTGGGGCTGTGCTGTCCCGACAGAGAGTTGATCTaGAAGCCCAGAGAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: VPERLAGSVLETLGLCCPDRELI*KPREAS
Trigger: GGAAGCTTCTCTGGGCTTTCAGATCAACTCTCTGTC...GGGACAGCACAGCCCCAGGGTTTCCAAAACTGACCCAGCAAGCCGCTCAGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR GCA 90 bp AAGCTCTGCCCCTGGCTAAGCAATTTTCACCAATGGCTAAGCCATCTGTCTTGCCCCCACAGCAGGCGCTaGAGCGGTTGCCGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: KLCPWLSNFHQWLSHLSCPHSRR*SGCRQF
Trigger: GAACTGGCGGCAACCGCTGCAGCGCCTGCTGTGGGG...GCAAGACAGATGGCTTAGCCATTGGTGAAAATTGCTTAGCCAGGGGCAGAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp GTGGGCTGCAAGGTTTGGAGAGCGAGTGAGTTGAGGTCTCCTGGGGCTTCTGGCGCCAGTGGTGAAGAGTaGATGGCACAACATCAGTGC +
Preference number: 4 (lower is better)
Translates to: VGCKVWRASELRSPGASGASGEE*MAQHQC
Trigger: GCACTGATGTTGTGCCATGCACTCTTCACCACTGGC...GCCAGAAGCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCAGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp TGCAAGGTTTGGAGAGCGAGTGAGTTGAGGTCTCCTGGGGCTTCTGGCCAGCCTATCCTGAGTGTCGCCTaGGTGAGTCATGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: CKVWRASELRSPGASGQPILSVA*VSHGGE
Trigger: CTCACCTCCATGACTCACCCAGGCGACACTCAGGAT...AGGCTGGCCAGAAGCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp TTGCCAAGGGGGCCCCACGGGTATCATCACATCCATATGGGCGCTATCAGTGGCTATGGGCGCTATCAGTaGCTTGGTCAAGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LPRGPHGYHHIHMGAISGYGRYQ*LGQALP
Trigger: GGGCAGAGCTTGACCAAGCCACTGATAGCGCCCATA...GCCACTGATAGCGCCCATATGGATGTGATGATACCCGTGGGGCCCCCTTGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp TTGCCAAGGGGGCCCCACGGGTATCATCACATCCATATGGGCGCTATCAGTGGCGATTGGTGGGAGGAATaGCAAGGCCAGTGGTACCCA +
Preference number: 4 (lower is better)
Translates to: LPRGPHGYHHIHMGAISGDWWEE*QGQWYP
Trigger: TGGGTACCACTGGCCTTGCCATTCCTCCCACCAATC...GCCACTGATAGCGCCCATATGGATGTGATGATACCCGTGGGGCCCCCTTGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp ACACCAGGAACCTGCAGCATTGACTTGAGGAAGGAGTCCGGGGTCAGGCCAGTCGAAAGAGGGGATTGGTaGGAGGAATGGCAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TPGTCSIDLRKESGVRPVERGDW*EEWQGQ
Trigger: CTGGCCTTGCCATTCCTCCCACCAATCCCCTCTTTC...GACTGGCCTGACCCCGGACTCCTTCCTCAAGTCAATGCTGCAGGTTCCTGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR CAA 72 bp CATCTGGTCAGGGCCCCAAACTCCTCTCTCCCTTCATaGGAATGGACCCAAGGCTCCAGAGCAACGTCCCTG +
Preference number: 4 (lower is better)
Translates to: HLVRAPNSSLPS*EWTQGSRATSL
Trigger: CAGGGACGTTGCTCTGGAGCCTTGGGTCCATTCCAATGAAGGGAGAGAGGAGTTTGGGGCCCTGACCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR TCA 90 bp TATGGGCGCTATCAGTGGCTTGGTCAAGCTCTGCCCCTGGCTAAGCAATTTTCAAGCCCTTCTGGTGCCTaGGCGGCTTGCTGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: YGRYQWLGQALPLAKQFSSPSGA*AACWVS
Trigger: ACTGACCCAGCAAGCCGCTCAGGCACCAGAAGGGCT...TGAAAATTGCTTAGCCAGGGGCAGAGCTTGACCAAGCCACTGATAGCGCCCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR TCA 90 bp ACACCAGGAACCTGCAGCATTGACTTGAGGAAGGAGTCCGGGGTCAGGCCAGTCCACCACATGGGATCCTaGATCCTCAGCTTGCCATCT +
Preference number: 4 (lower is better)
Translates to: TPGTCSIDLRKESGVRPVHHMGS*ILSLPS
Trigger: AGATGGCAAGCTGAGGATTCAGGATCCCATGTGGTG...GACTGGCCTGACCCCGGACTCCTTCCTCAAGTCAATGCTGCAGGTTCCTGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR TCA 90 bp AGATGCTGTCAGTTGCCAAGGGGGCCCCACGGGTATCATCACATCCATATGGGCGTCTGGAGCAGGGCCTaGGACTGTATTTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: RCCQLPRGPHGYHHIHMGVWSRA*DCISNQ
Trigger: CTGGTTGGAAATACAGTCTCAGGCCCTGCTCCAGAC...GCCCATATGGATGTGATGATACCCGTGGGGCCCCCTTGGCAACTGACAGCATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR GCA 90 bp ACTCACGCCCAGCCTCAGCTCATGCACCAAAACCCATCCAACCATGAGACCACATCCACTCGCGGCTGCTaGATCATGTCTGGTGCACCT +
Preference number: 4 (lower is better)
Translates to: THAQPQLMHQNPSNHETTSTRGC*IMSGAP
Trigger: AGGTGCACCAGACATGATGCAGCAGCCGCGAGTGGA...TGTGGTCTCATGGTTGGATGGGTTTTGGTGCATGAGCTGAGGCTGGGCGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR GCA 90 bp CATCACATCCATATGGGCGCTATCAGTGGCTTGGTCAAGCTCTGCCCCTGGCTAAAAGATGCTGTCAGTTaGCAAGGGGGCCCCACGGGT +
Preference number: 4 (lower is better)
Translates to: HHIHMGAISGLVKLCPWLKDAVS*QGGPTG
Trigger: ACCCGTGGGGCCCCCTTGGCAACTGACAGCATCTTT...TAGCCAGGGGCAGAGCTTGACCAAGCCACTGATAGCGCCCATATGGATGTGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp CCAGAGCAACGTCCCTGGCTAGCAATGCATGGCCAAGTCAATGATGGATCTAGGCCAAAGCCCTTCTGGTaGCTGAGCGGCTTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PEQRPWLAMHGQVNDGSRPKPFW*LSGLLG
Trigger: ACCCAGCAAGCCGCTCAGGCACCAGAAGGGCTTTGG...CCTAGATCCATCATTGACTTGGCCATGCATTGCTAGCCAGGGACGTTGCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp CTGCCCACATCCCATCCACTAGAGCATCTGGTCAGGGCCCCAAACTCCTCTCTCAACAGACACAGGCAGTaGGATGGGGTTGCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: LPTSHPLEHLVRAPNSSLNRHRQ*DGVALL
Trigger: TAGAAGGGCAACCCCATCCCACTGCCTGTGTCTGTT...GAGAGAGGAGTTTGGGGCCCTGACCAGATGCTCTAGTGGATGGGATGTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp AGATGCTGTCAGTTGCCAAGGGGGCCCCACGGGTATCATCACATCCATATGGGCTATGGGCGCTATCAGTaGCTTGGTCAAGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: RCCQLPRGPHGYHHIHMGYGRYQ*LGQALP
Trigger: GGGCAGAGCTTGACCAAGCCACTGATAGCGCCCATA...GCCCATATGGATGTGATGATACCCGTGGGGCCCCCTTGGCAACTGACAGCATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp GGGGGCCCCACGGGTATCATCACATCCATATGGGCGCTATCAGTGGCTTGGTCACTGTCTGACCCCAGTTaGCCCATTTCTCAGACTTGG +
Preference number: 4 (lower is better)
Translates to: GGPTGIITSIWALSVAWSLSDPS*PISQTW
Trigger: CCAAGTCTGAGAAATGGGCCAACTGGGGTCAGACAG...TGACCAAGCCACTGATAGCGCCCATATGGATGTGATGATACCCGTGGGGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp CTCCCCGTGGGGTCTCAGGCCCTAGGCCAGGGCTCAACAGACACAGGCAGTGGGCACACATTGTGTAAGTaGGTGAAATGGGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: LPVGSQALGQGSTDTGSGHTLCK*VKWDFL
Trigger: CAAGAAATCCCATTTCACCCACTTACACAATGTGTG...CCCACTGCCTGTGTCTGTTGAGCCCTGGCCTAGGGCCTGAGACCCCACGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp CTCCCCGTGGGGTCTCAGGCCCTAGGCCAGGGCTCAACAGACACAGGCAGTGGGTCCTTCAACAGTCTTTaGGGTCAAAAGATCTTATGC +
Preference number: 4 (lower is better)
Translates to: LPVGSQALGQGSTDTGSGSFNSL*GQKILC
Trigger: GCATAAGATCTTTTGACCCCAAAGACTGTTGAAGGA...CCCACTGCCTGTGTCTGTTGAGCCCTGGCCTAGGGCCTGAGACCCCACGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp CATCACATCCATATGGGCGCTATCAGTGGCTTGGTCAAGCTCTGCCCCTGGCTAAGCAGGGATCAGAACTaGGCAGGAGTTGGGGATGGC +
Preference number: 4 (lower is better)
Translates to: HHIHMGAISGLVKLCPWLSRDQN*AGVGDG
Trigger: GCCATCCCCAACTCCTGCCCAGTTCTGATCCCTGCT...TAGCCAGGGGCAGAGCTTGACCAAGCCACTGATAGCGCCCATATGGATGTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp CTCCCTCTCCCCGTGGGGTCTCAGGCCCTAGGCCAGGGCTCAACAGACACAGGCAAGGTATATAGTCTGTaGGGAAAGGAAGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LPLPVGSQALGQGSTDTGKVYSL*GKEEGL
Trigger: AAGACCTTCTTCCTTTCCCCACAGACTATATACCTT...GCCTGTGTCTGTTGAGCCCTGGCCTAGGGCCTGAGACCCCACGGGGAGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp TTGCCCATCAGCTCTCTAGTCTGGGTGCACCTCCTTACCCCATACCAGCTGGGCATCAGCTCTCTAGTCTaGGTGCACCTCCTTACCCCA +
Preference number: 4 (lower is better)
Translates to: LPISSLVWVHLLTPYQLGISSLV*VHLLTP
Trigger: TGGGGTAAGGAGGTGCACCCAGACTAGAGAGCTGAT...GCCCAGCTGGTATGGGGTAAGGAGGTGCACCCAGACTAGAGAGCTGATGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR TCA 90 bp CTGGCCAGCCTTCTCCCTGATAGATTTTTGTCACTGGGACCCTCTCTAGAGTCTGGTGAGTCATGGAGGTaGGGAGGCCCACAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LASLLPDRFLSLGPSLESGESWR*GGPQGS
Trigger: TGAGCCTTGTGGGCCTCCTCACCTCCATGACTCACC...AGACTCTAGAGAGGGTCCCAGTGACAAAAATCTATCAGGGAGAAGGCTGGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR TCA 90 bp ACACCAGGAACCTGCAGCATTGACTTGAGGAAGGAGTCCGGGGTCAGGCCAGTCCTAGCCCCAAGGCCCTaGGTATTTATGGGACAAAAG +
Preference number: 4 (lower is better)
Translates to: TPGTCSIDLRKESGVRPVLAPRP*VFMGQK
Trigger: CTTTTGTCCCATAAATACTCAGGGCCTTGGGGCTAG...GACTGGCCTGACCCCGGACTCCTTCCTCAAGTCAATGCTGCAGGTTCCTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR TCA 90 bp CCAGAGCAACGTCCCTGGCTAGCAATGCATGGCCAAGTCAATGATGGATCTAGGGGTGGGCAGATCACCTaGGGTCAGGGATTCAAGACC +
Preference number: 4 (lower is better)
Translates to: PEQRPWLAMHGQVNDGSRGGQIT*GQGFKT
Trigger: GGTCTTGAATCCCTGACCTCAGGTGATCTGCCCACC...CCTAGATCCATCATTGACTTGGCCATGCATTGCTAGCCAGGGACGTTGCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR GCA 90 bp GGGGGCCCCACGGGTATCATCACATCCATATGGGCGCTATCAGTGGCTTGGTCATTACCTAAGTCATGTTaGTTCCTGCAGCGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GGPTGIITSIWALSVAWSLPKSC*FLQRPG
Trigger: TCCTGGGCGCTGCAGGAAGCAACATGACTTAGGTAA...TGACCAAGCCACTGATAGCGCCCATATGGATGTGATGATACCCGTGGGGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp TTGACTCACAACAACCCCATGACAGAAGTGGCCCACGTAACATTGAGGCTCAAAAGGCGCTGCAGCGGTTaGCGCCAGTTCGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LTHNNPMTEVAHVTLRLKRRCSG*RQFEVL
Trigger: GAGCACCTCGAACTGGCGGCAACCGCTGCAGCGCCT...TTTGAGCCTCAATGTTACGTGGGCCACTTCTGTCATGGGGTTGTTGTGAGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp AGATGCTGTCAGTTGCCAAGGGGGCCCCACGGGTATCATCACATCCATATGGGCGCCAGTGGTGAAGAGTaGATGGCACAACATCAGTGC +
Preference number: 4 (lower is better)
Translates to: RCCQLPRGPHGYHHIHMGASGEE*MAQHQC
Trigger: GCACTGATGTTGTGCCATGCACTCTTCACCACTGGC...GCCCATATGGATGTGATGATACCCGTGGGGCCCCCTTGGCAACTGACAGCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp CCAGAGCAACGTCCCTGGCTAGCAATGCATGGCCAAGTCAATGATGGATCTAGGCCACTCACACAGCTGTaGAAGCATCTGGCACCCAGC +
Preference number: 4 (lower is better)
Translates to: PEQRPWLAMHGQVNDGSRPLTQL*KHLAPS
Trigger: GCTGGGTGCCAGATGCTTGCACAGCTGTGTGAGTGG...CCTAGATCCATCATTGACTTGGCCATGCATTGCTAGCCAGGGACGTTGCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp ACACCAGGAACCTGCAGCATTGACTTGAGGAAGGAGTCCGGGGTCAGGCCAGTCACACAGGCAGTGGGATaGGGTTGCCCTTCTATTGAT +
Preference number: 4 (lower is better)
Translates to: TPGTCSIDLRKESGVRPVTQAVG*GCPSID
Trigger: ATCAATAGAAGGGCAACCCCATCCCACTGCCTGTGT...GACTGGCCTGACCCCGGACTCCTTCCTCAAGTCAATGCTGCAGGTTCCTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp AGATGCTGTCAGTTGCCAAGGGGGCCCCACGGGTATCATCACATCCATATGGGCCCCATTTCTCAGACTTaGGGATGCAGACTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RCCQLPRGPHGYHHIHMGPISQT*GCRLRQ
Trigger: CTGCCTCAGTCTGCATCCCCAAGTCTGAGAAATGGG...GCCCATATGGATGTGATGATACCCGTGGGGCCCCCTTGGCAACTGACAGCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR TCA 90 bp CAGTGCAATAGGCATTCTCATAATACCCCCTTATGCTTCACTTCTCAAACAGGGCCCAGCCATGCCTCGTaGCCCAGGCTGACCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QCNRHSHNTPLCFTSQTGPSHAS*PRLTRA
Trigger: TGCCCTGGTCAGCCTGGGTCACGAGGCATGGCTGGG...CCCTGTTTGAGAAGTGAAGCATAAGGGGGTATTATGAGAATGCCTATTGCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR TCA 90 bp GTGGGCTGCAAGGTTTGGAGAGCGAGTGAGTTGAGGTCTCCTGGGGCTTCTGGCACAGCTGAGTGGCTATaGGAAAAAGATGCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: VGCKVWRASELRSPGASGTAEWL*EKDAVS
Trigger: ACTGACAGCATCTTTTTCTCATAGCCACTCAGCTGT...GCCAGAAGCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCAGCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp TCCTCTCTCCCTTCATTGGAATGGACCCAAGGCTCCAGAGCAACGTCCCTGGCTTTACCTAAGTCATGTTaGTTCCTGCAGCGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SSLPSLEWTQGSRATSLALPKSC*FLQRPG
Trigger: TCCTGGGCGCTGCAGGAAGCAACATGACTTAGGTAA...AGCCAGGGACGTTGCTCTGGAGCCTTGGGTCCATTCCAATGAAGGGAGAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR GCA 90 bp TCCTCTCTCCCTTCATTGGAATGGACCCAAGGCTCCAGAGCAACGTCCCTGGCTCTCACACCAGGAACCTaGAGCATTGACTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SSLPSLEWTQGSRATSLALTPGT*SIDLRK
Trigger: CTTCCTCAAGTCAATGCTGCAGGTTCCTGGTGTGAG...AGCCAGGGACGTTGCTCTGGAGCCTTGGGTCCATTCCAATGAAGGGAGAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR GCA 90 bp TTGCCAAGGGGGCCCCACGGGTATCATCACATCCATATGGGCGCTATCAGTGGCGCTATGAGAAAAAGATaGTGTCAGTTGCCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: LPRGPHGYHHIHMGAISGAMRKR*CQLPRG
Trigger: CCCCCTTGGCAACTGACAGCATCTTTTTCTCATAGC...GCCACTGATAGCGCCCATATGGATGTGATGATACCCGTGGGGCCCCCTTGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp TGCAAGGTTTGGAGAGCGAGTGAGTTGAGGTCTCCTGGGGCTTCTGGCCAGCCTAGGGCATCAAAGGATTaGCCTTTCCAAAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: CKVWRASELRSPGASGQPRASKD*PFQSPS
Trigger: AGAAGGGCTTTGGAAAGGGCAATCCTTTGATGCCCT...AGGCTGGCCAGAAGCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR GCA 90 bp CTGCCCACATCCCATCCACTAGAGCATCTGGTCAGGGCCCCAAACTCCTCTCTCCCTGAATCCTCAGCTTaGCATCTAGATTGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: LPTSHPLEHLVRAPNSSLPESSA*HLDWLD
Trigger: GTCAAGCCAATCTAGATGGCAAGCTGAGGATTCAGG...GAGAGAGGAGTTTGGGGCCCTGACCAGATGCTCTAGTGGATGGGATGTGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp GTTGATCTGAAAGCCCAGAGAAGCTTCCTGTTCCTTCAACAGTCTTTGGGGTCAGAGGTGCTCCACCACTaGATCCAGCTCGGGGGCATG +
Preference number: 4 (lower is better)
Translates to: VDLKAQRSFLFLQQSLGSEVLHH*IQLGGM
Trigger: CATGCCCCCGAGCTGGATCCAGTGGTGGAGCACCTC...TGACCCCAAAGACTGTTGAAGGAACAGGAAGCTTCTCTGGGCTTTCAGATCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp GGGGGCCCCACGGGTATCATCACATCCATATGGGCGCTATCAGTGGCTTGGTCAGTCAAGCTCTGCCCCTaGCTAAGCAATTTTCACCAA +
Preference number: 4 (lower is better)
Translates to: GGPTGIITSIWALSVAWSVKLCP*LSNFHQ
Trigger: TTGGTGAAAATTGCTTAGCCAGGGGCAGAGCTTGAC...TGACCAAGCCACTGATAGCGCCCATATGGATGTGATGATACCCGTGGGGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp GGGGGCCCCACGGGTATCATCACATCCATATGGGCGCTATCAGTGGCTTGGTCAATCATCACATCCATATaGGCGCTATCAGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GGPTGIITSIWALSVAWSIITSI*ALSVAW
Trigger: CCAAGCCACTGATAGCGCCCATATGGATGTGATGAT...TGACCAAGCCACTGATAGCGCCCATATGGATGTGATGATACCCGTGGGGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp ACACCAGGAACCTGCAGCATTGACTTGAGGAAGGAGTCCGGGGTCAGGCCAGTCAGTCTGTGGTTCTCCTaGAAGTGGAAAGAGGGGATT +
Preference number: 4 (lower is better)
Translates to: TPGTCSIDLRKESGVRPVSLWFS*KWKEGI
Trigger: AATCCCCTCTTTCCACTTCCAGGAGAACCACAGACT...GACTGGCCTGACCCCGGACTCCTTCCTCAAGTCAATGCTGCAGGTTCCTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp CCTCCCTCTCCCCGTGGGGTCTCAGGCCCTAGGCCAGGGCTCAACAGACACAGGCATTTTGAGATTTCATaGCACATGACCTTTTACATC +
Preference number: 4 (lower is better)
Translates to: PPSPRGVSGPRPGLNRHRHFEIS*HMTFYI
Trigger: GATGTAAAAGGTCATGTGCCATGAAATCTCAAAATG...CCTGTGTCTGTTGAGCCCTGGCCTAGGGCCTGAGACCCCACGGGGAGAGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp GTTGATCTGAAAGCCCAGAGAAGCTTCCTGTTCCTTCAACAGTCTTTGGGGTCAAGCTGTGCAAGCATCTaGCACCCAGCCCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VDLKAQRSFLFLQQSLGSSCASI*HPAPGP
Trigger: TGGGCCTGGGGCTGGGTGCCAGATGCTTGCACAGCT...TGACCCCAAAGACTGTTGAAGGAACAGGAAGCTTCTCTGGGCTTTCAGATCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp CCAGAGCAACGTCCCTGGCTAGCAATGCATGGCCAAGTCAATGATGGATCTAGGCCAGAGCAACGTCCCTaGCTAGCAATGCATGGCCAA +
Preference number: 4 (lower is better)
Translates to: PEQRPWLAMHGQVNDGSRPEQRP*LAMHGQ
Trigger: TTGGCCATGCATTGCTAGCCAGGGACGTTGCTCTGG...CCTAGATCCATCATTGACTTGGCCATGCATTGCTAGCCAGGGACGTTGCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR CAA 72 bp CTGGGGCTTCTGGCCAGCCTTCTCCCTGATAGATTTTaGTCACTGGGACCCTCTCTAGAGTCTGTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: LGLLASLLPDRF*SLGPSLESVVL
Trigger: GAGAACCACAGACTCTAGAGAGGGTCCCAGTGACAAAAATCTATCAGGGAGAAGGCTGGCCAGAAGCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR TCA 90 bp CTGGCTAAGCAATTTTCACCAATGGCTAAGCCATCTGTCTTGCCCCCTCTTCTCGGTGGGAGCCAGTGGTaGAGAGTGCATGGCACAACA +
Preference number: 4 (lower is better)
Translates to: LAKQFSPMAKPSVLPPLLGGSQW*RVHGTT
Trigger: TGTTGTGCCATGCACTCTTCACCACTGGCTCCCACC...GAGAAGAGGGGGCAAGACAGATGGCTTAGCCATTGGTGAAAATTGCTTAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp GGATCTAATTTGATGAGTATTGCCCATCAGCTCTCTAGTCTGGGTGCACCTCCTCATGTCTGGTGCACCTaGGGAGAGGGCCAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: GSNLMSIAHQLSSLGAPPHVWCT*GEGQGL
Trigger: AAGACCCTGGCCCTCTCCCCAGGTGCACCAGACATG...AGGAGGTGCACCCAGACTAGAGAGCTGATGGGCAATACTCATCAAATTAGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp ACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCAGGACAAGAGCCGGTAGCAGGTaGCGCCACACCGCGGCCACG +
Preference number: 4 (lower is better)
Translates to: TLNRPLVYHFRAKILSRTRAGSR*RHTAAT
Trigger: CGTGGCCGCGGTGTGGCGCCACCTGCTACCGGCTCT...TGTCCTGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp TATGGGCGCTATCAGTGGCTTGGTCAAGCTCTGCCCCTGGCTAAGCAATTTTCAATCCTGAGTGTCGCCTaGGTGAGTCATGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: YGRYQWLGQALPLAKQFSILSVA*VSHGGE
Trigger: CTCACCTCCATGACTCACCCAGGCGACACTCAGGAT...TGAAAATTGCTTAGCCAGGGGCAGAGCTTGACCAAGCCACTGATAGCGCCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp AGATGCTGTCAGTTGCCAAGGGGGCCCCACGGGTATCATCACATCCATATGGGCATCATCACATCCATATaGGCGCTATCAGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RCCQLPRGPHGYHHIHMGIITSI*ALSVAW
Trigger: CCAAGCCACTGATAGCGCCCATATGGATGTGATGAT...GCCCATATGGATGTGATGATACCCGTGGGGCCCCCTTGGCAACTGACAGCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp TCCTCTCTCCCTTCATTGGAATGGACCCAAGGCTCCAGAGCAACGTCCCTGGCTAGTCTGTGGTTCTCCTaGAAGTGGAAAGAGGGGATT +
Preference number: 4 (lower is better)
Translates to: SSLPSLEWTQGSRATSLASLWFS*KWKEGI
Trigger: AATCCCCTCTTTCCACTTCCAGGAGAACCACAGACT...AGCCAGGGACGTTGCTCTGGAGCCTTGGGTCCATTCCAATGAAGGGAGAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp TGTTTTACCCTTCCCTTTACCTATCCTGCTCCCACTAGTAACAGTGCAATAGGCGCCTGGCCTTGCCACTaGCAACTGGCTATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CFTLPFTYPAPTSNSAIGAWPCH*QLAILG
Trigger: GCCCAGGATAGCCAGTTGCCAGTGGCAAGGCCAGGC...GCCTATTGCACTGTTACTAGTGGGAGCAGGATAGGTAAAGGGAAGGGTAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR TCA 90 bp AAGCTCTGCCCCTGGCTAAGCAATTTTCACCAATGGCTAAGCCATCTGTCTTGCAGGAACCTGCAGCATTaGCTTGAGGAAGGAGTCCGG +
Preference number: 4 (lower is better)
Translates to: KLCPWLSNFHQWLSHLSCRNLQH*LEEGVR
Trigger: CCGGACTCCTTCCTCAAGTCAATGCTGCAGGTTCCT...GCAAGACAGATGGCTTAGCCATTGGTGAAAATTGCTTAGCCAGGGGCAGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR TCA 90 bp ACACCAGGAACCTGCAGCATTGACTTGAGGAAGGAGTCCGGGGTCAGGCCAGTCACATTGAGGCTCAAATaGATTAATTGGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: TPGTCSIDLRKESGVRPVTLRLK*INWPRP
Trigger: TGGCCTTGGCCAATTAATTCATTTGAGCCTCAATGT...GACTGGCCTGACCCCGGACTCCTTCCTCAAGTCAATGCTGCAGGTTCCTGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR TCA 90 bp TCAATGTTTTGTTGGAGGGGCCAGCAAGTGAACGAACGGCCAGCATTCAGGGCATCCAGGACAGAGAGTTaGTCTGAAAGCCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SMFCWRGQQVNERPAFRASRTES*SESPEK
Trigger: CTTCTCTGGGCTTTCAGATCAACTCTCTGTCCTGGA...TGCCCTGAATGCTGGCCGTTCGTTCACTTGCTGGCCCCTCCAACAAAACATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR GCA 90 bp CTCATAATACCCCCTTATGCTTCACTTCTCAAACAGGGTACAATGTATCACCTGCAGCGCACCCAGCCATaGCTCGTGACCCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LIIPPYASLLKQGTMYHLQRTQP*LVTQAD
Trigger: GTCAGCCTGGGTCACGAGGCATGGCTGGGTGCGCTG...CAGGTGATACATTGTACCCTGTTTGAGAAGTGAAGCATAAGGGGGTATTATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR GCA 90 bp TATGGGCGCTATCAGTGGCTTGGTCAAGCTCTGCCCCTGGCTAAGCAATTTTCACTAAGCCATCTGTCTTaGCCCCTCTTCTCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: YGRYQWLGQALPLAKQFSLSHLS*PLFSKP
Trigger: GGGCTTTGAGAAGAGGGGGCAAGACAGATGGCTTAG...TGAAAATTGCTTAGCCAGGGGCAGAGCTTGACCAAGCCACTGATAGCGCCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp ACTCACGCCCAGCCTCAGCTCATGCACCAAAACCCATCCAACCATGAGACCACAGCTATGAGAAAAAGATaGTGTCAGTTGCCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: THAQPQLMHQNPSNHETTAMRKR*CQLPRG
Trigger: CCCCCTTGGCAACTGACAGCATCTTTTTCTCATAGC...TGTGGTCTCATGGTTGGATGGGTTTTGGTGCATGAGCTGAGGCTGGGCGTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR GCA 90 bp ACTCACGCCCAGCCTCAGCTCATGCACCAAAACCCATCCAACCATGAGACCACAGGAATCTTGTTAAAATaGAGGCTCTTGGCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: THAQPQLMHQNPSNHETTGILLK*RLLARH
Trigger: GTGCCTGGCCAAGAGCCTGCATTTTAACAAGATTCC...TGTGGTCTCATGGTTGGATGGGTTTTGGTGCATGAGCTGAGGCTGGGCGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp ACACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCAGGACAGCTCGGGGGCATGTaGCTCACCCACCAGCGCACC +
Preference number: 4 (lower is better)
Translates to: THLTDLLFTILGPKFYPGQLGGM*LTHQRT
Trigger: GGTGCGCTGGTGGGTGAGCCACATGCCCCCGAGCTG...TCCTGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp TGTACACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCAAGAGCCGGTAGCAGGTaGCGCCACACCGCGGCCACG +
Preference number: 4 (lower is better)
Translates to: CTHLTDLLFTILGPKFYPRAGSR*RHTAAT
Trigger: CGTGGCCGCGGTGTGGCGCCACCTGCTACCGGCTCT...TGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp CTGGCTAAGCAATTTTCACCAATGGCTAAGCCATCTGTCTTGCCCCCTCTTCTCCAAGGCTCAGCAGTGTaGAGAAGAGCAGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LAKQFSPMAKPSVLPPLLQGSAV*RRAAGR
Trigger: CCTTCCTGCTGCTCTTCTCCACACTGCTGAGCCTTG...GAGAAGAGGGGGCAAGACAGATGGCTTAGCCATTGGTGAAAATTGCTTAGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp TTGACTCACAACAACCCCATGACAGAAGTGGCCCACGTAACATTGAGGCTCAAAGTCTCCTGGGGCTTCTaGCCAGCCTTCTCCCTGATA +
Preference number: 4 (lower is better)
Translates to: LTHNNPMTEVAHVTLRLKVSWGF*PAFSLI
Trigger: TATCAGGGAGAAGGCTGGCCAGAAGCCCCAGGAGAC...TTTGAGCCTCAATGTTACGTGGGCCACTTCTGTCATGGGGTTGTTGTGAGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp ACTCACGCCCAGCCTCAGCTCATGCACCAAAACCCATCCAACCATGAGACCACAGGTGGGGGTCAGGTGTaGATAAAGTTGTCTATCATG +
Preference number: 4 (lower is better)
Translates to: THAQPQLMHQNPSNHETTGGGQV*IKLSIM
Trigger: CATGATAGACAACTTTATCCACACCTGACCCCCACC...TGTGGTCTCATGGTTGGATGGGTTTTGGTGCATGAGCTGAGGCTGGGCGTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR TCA 90 bp CCAGAGCAACGTCCCTGGCTAGCAATGCATGGCCAAGTCAATGATGGATCTAGGAGTCTAAGGCAAAAATaGACCAGGGTTCTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PEQRPWLAMHGQVNDGSRSLRQK*TRVLGA
Trigger: AGCCCCTAGAACCCTGGTTCATTTTTGCCTTAGACT...CCTAGATCCATCATTGACTTGGCCATGCATTGCTAGCCAGGGACGTTGCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR GCA 90 bp CGCCTACAGAAAGTTCTTAGAGCTCAAAACAACATCTTACAGGTTTTTGGCTTCCAGCGCACCCAGCCATaGCTCGTGACCCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: RLQKVLRAQNNILQVFGFQRTQP*LVTQAD
Trigger: GTCAGCCTGGGTCACGAGGCATGGCTGGGTGCGCTG...GAAGCCAAAAACCTGTAAGATGTTGTTTTGAGCTCTAAGAACTTTCTGTAGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp CTAAGCAATTTTCACCAATGGCTAAGCCATCTGTCTTGCCCCCTCTTCTCAAAGAAAGATGCTGTCAGTTaGCAAGGGGGCCCCACGGGT +
Preference number: 4 (lower is better)
Translates to: LSNFHQWLSHLSCPLFSKKDAVS*QGGPTG
Trigger: ACCCGTGGGGCCCCCTTGGCAACTGACAGCATCTTT...CTTTGAGAAGAGGGGGCAAGACAGATGGCTTAGCCATTGGTGAAAATTGCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp AAGCTCTGCCCCTGGCTAAGCAATTTTCACCAATGGCTAAGCCATCTGTCTTGCAGAAGGTCTTCTCCTTaGTGCTGCCCACATCCCATC +
Preference number: 4 (lower is better)
Translates to: KLCPWLSNFHQWLSHLSCRRSSP*CCPHPI
Trigger: GATGGGATGTGGGCAGCAGCAAGGAGAAGACCTTCT...GCAAGACAGATGGCTTAGCCATTGGTGAAAATTGCTTAGCCAGGGGCAGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp CAGTGCAATAGGCATTCTCATAATACCCCCTTATGCTTCACTTCTCAAACAGGGCTGCTGCATCATGTCTaGTGCACCTGGGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: QCNRHSHNTPLCFTSQTGLLHHV*CTWGEG
Trigger: GCCCTCTCCCCAGGTGCACCAGACATGATGCAGCAG...CCCTGTTTGAGAAGTGAAGCATAAGGGGGTATTATGAGAATGCCTATTGCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp TCACAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAAGTGGCCCACCTCGCCAGCCCCGATaGTATCTGTCTCCACTCGCG +
Preference number: 4 (lower is better)
Translates to: SQIDIVFDSQQPHDRSGPPRQPR*YLSPLA
Trigger: CGCGAGTGGAGACAGATACCATCGGGGCTGGCGAGG...TGGGCCACTTCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp TCAATGTTTTGTTGGAGGGGCCAGCAAGTGAACGAACGGCCAGCATTCAGGGCAGTCAAGCTCTGCCCCTaGCTAAGCAATTTTCACCAA +
Preference number: 4 (lower is better)
Translates to: SMFCWRGQQVNERPAFRAVKLCP*LSNFHQ
Trigger: TTGGTGAAAATTGCTTAGCCAGGGGCAGAGCTTGAC...TGCCCTGAATGCTGGCCGTTCGTTCACTTGCTGGCCCCTCCAACAAAACATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp GGATCTAATTTGATGAGTATTGCCCATCAGCTCTCTAGTCTGGGTGCACCTCCTGAAAGAGGGGATTGGTaGGAGGAATGGCAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GSNLMSIAHQLSSLGAPPERGDW*EEWQGQ
Trigger: CTGGCCTTGCCATTCCTCCCACCAATCCCCTCTTTC...AGGAGGTGCACCCAGACTAGAGAGCTGATGGGCAATACTCATCAAATTAGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp TGGGGTCTTCAGTTAGTTAGGTTGTTTGTGTTTCCTTTGCCCCCTTCACCTTCCGTGGAAAGAGGGGATTaGTGGGAGGAATGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: WGLQLVRLFVFPLPPSPSVERGD*WEEWQG
Trigger: GCCTTGCCATTCCTCCCACCAATCCCCTCTTTCCAC...GGAAGGTGAAGGGGGCAAAGGAAACACAAACAACCTAACTAACTGAAGACCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp CTAAGCAATTTTCACCAATGGCTAAGCCATCTGTCTTGCCCCCTCTTCTCAAAGGGGGGACCTTGGGTCTaGGGCTTCAAGAGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: LSNFHQWLSHLSCPLFSKGGPWV*GFKSKD
Trigger: ATCCTTGCTCTTGAAGCCCCAGACCCAAGGTCCCCC...CTTTGAGAAGAGGGGGCAAGACAGATGGCTTAGCCATTGGTGAAAATTGCTTAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp CTGGCTAAGCAATTTTCACCAATGGCTAAGCCATCTGTCTTGCCCCCTCTTCTCCTCCCTTCATTGGAATaGACCCAAGGCTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LAKQFSPMAKPSVLPPLLLPSLE*TQGSRA
Trigger: TGCTCTGGAGCCTTGGGTCCATTCCAATGAAGGGAG...GAGAAGAGGGGGCAAGACAGATGGCTTAGCCATTGGTGAAAATTGCTTAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp CAGTGCAATAGGCATTCTCATAATACCCCCTTATGCTTCACTTCTCAAACAGGGGGCAGGAGAATTGCTTaGACCTGGGAGGTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: QCNRHSHNTPLCFTSQTGGRRIA*TWEVER
Trigger: GCGCTCCACCTCCCAGGTCCAAGCAATTCTCCTGCC...CCCTGTTTGAGAAGTGAAGCATAAGGGGGTATTATGAGAATGCCTATTGCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR CAA 72 bp GGGTATCATCACATCCATATGGGCGCTATCAGTGGCTaGGTCAAGCTCTGCCCCTGGCTAAGCAATTTTCAC +
Preference number: 4 (lower is better)
Translates to: GYHHIHMGAISG*VKLCPWLSNFH
Trigger: GTGAAAATTGCTTAGCCAGGGGCAGAGCTTGACCAAGCCACTGATAGCGCCCATATGGATGTGATGATACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR TCA 90 bp GGATCTAATTTGATGAGTATTGCCCATCAGCTCTCTAGTCTGGGTGCACCTCCTTCTGGGACTACATTTTaGGGGGCAAGGCCCTTATGG +
Preference number: 4 (lower is better)
Translates to: GSNLMSIAHQLSSLGAPPSGTTF*GARPLW
Trigger: CCATAAGGGCCTTGCCCCTCAAAATGTAGTCCCAGA...AGGAGGTGCACCCAGACTAGAGAGCTGATGGGCAATACTCATCAAATTAGATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp CAAAATGCTTCACAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGACAGCTCGGGGGCATGTaGCTCACCCACCAGCGCACC +
Preference number: 4 (lower is better)
Translates to: QNASQIDIVFDSQQPHDRQLGGM*LTHQRT
Trigger: GGTGCGCTGGTGGGTGAGCCACATGCCCCCGAGCTG...TCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTGTGAAGCATTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp CGCCTACAGAAAGTTCTTAGAGCTCAAAACAACATCTTACAGGTTTTTGGCTTCGAGGTGCTCCACCACTaGATCCAGCTCGGGGGCATG +
Preference number: 4 (lower is better)
Translates to: RLQKVLRAQNNILQVFGFEVLHH*IQLGGM
Trigger: CATGCCCCCGAGCTGGATCCAGTGGTGGAGCACCTC...GAAGCCAAAAACCTGTAAGATGTTGTTTTGAGCTCTAAGAACTTTCTGTAGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp TGGGGTCTTCAGTTAGTTAGGTTGTTTGTGTTTCCTTTGCCCCCTTCACCTTCCGTGGTGAAGAGTGCATaGCACAACATCAGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: WGLQLVRLFVFPLPPSPSVVKSA*HNISAS
Trigger: GCTGGCACTGATGTTGTGCCATGCACTCTTCACCAC...GGAAGGTGAAGGGGGCAAAGGAAACACAAACAACCTAACTAACTGAAGACCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp GTTGATCTGAAAGCCCAGAGAAGCTTCCTGTTCCTTCAACAGTCTTTGGGGTCAGTGGTGAAGAGTGCATaGCACAACATCAGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: VDLKAQRSFLFLQQSLGSVVKSA*HNISAS
Trigger: GCTGGCACTGATGTTGTGCCATGCACTCTTCACCAC...TGACCCCAAAGACTGTTGAAGGAACAGGAAGCTTCTCTGGGCTTTCAGATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp CAAAATGCTTCACAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAGGCAGGAGTTGGGGATaGCCAGGGCTTGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: QNASQIDIVFDSQQPHDRGRSWG*PGLGWG
Trigger: CCCCCACCCAAGCCCTGGCCATCCCCAACTCCTGCC...TCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTGTGAAGCATTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR CAA 72 bp ACTGTATTTCCAACCAGCTTCCAGGTGATGCCTGTGTaGCTGATTCTGGGACTACATTTTGAGGGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: TVFPTSFQVMPV*LILGLHFEGQG
Trigger: GCCTTGCCCCTCAAAATGTAGTCCCAGAATCAGCAACACAGGCATCACCTGGAAGCTGGTTGGAAATACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR TCA 90 bp GCTTCACAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAAGTGGCGGTGGGAGCCAGTGGTaGAGAGTGCATGGCACAACA +
Preference number: 4 (lower is better)
Translates to: ASQIDIVFDSQQPHDRSGGGSQW*RVHGTT
Trigger: TGTTGTGCCATGCACTCTTCACCACTGGCTCCCACC...GCCACTTCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTGTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR TCA 90 bp TGTACACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCACAAGGCAGGGAGCCCTaGTCCCATTGCCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: CTHLTDLLFTILGPKFYPQGREP*SHCPPS
Trigger: AGAGGGAGGGCAATGGGATCAGGGCTCCCTGCCTTG...TGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR TCA 90 bp ACACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCAGGAGGTTTGGAGAGCGAGTaGGTTGAGGTCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: THLTDLLFTILGPKFYPGGLESE*VEVSWG
Trigger: GCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACC...TCCTGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR TCA 90 bp CGCCTACAGAAAGTTCTTAGAGCTCAAAACAACATCTTACAGGTTTTTGGCTTCGGTTTGGAGAGCGAGTaGGTTGAGGTCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RLQKVLRAQNNILQVFGFGLESE*VEVSWG
Trigger: GCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACC...GAAGCCAAAAACCTGTAAGATGTTGTTTTGAGCTCTAAGAACTTTCTGTAGGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR TCA 90 bp AGATGCTGTCAGTTGCCAAGGGGGCCCCACGGGTATCATCACATCCATATGGGCAGATTTCATGGCACATaGCCTTTTACATCTTGTACA +
Preference number: 4 (lower is better)
Translates to: RCCQLPRGPHGYHHIHMGRFHGT*PFTSCT
Trigger: TGTACAAGATGTAAAAGGTCATGTGCCATGAAATCT...GCCCATATGGATGTGATGATACCCGTGGGGCCCCCTTGGCAACTGACAGCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR TCA 90 bp GTTGATCTGAAAGCCCAGAGAAGCTTCCTGTTCCTTCAACAGTCTTTGGGGTCACCATCTAGATTGGCTTaGCTCATGACTTCCCTAGGC +
Preference number: 4 (lower is better)
Translates to: VDLKAQRSFLFLQQSLGSPSRLA*LMTSLG
Trigger: GCCTAGGGAAGTCATGAGTCAAGCCAATCTAGATGG...TGACCCCAAAGACTGTTGAAGGAACAGGAAGCTTCTCTGGGCTTTCAGATCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR TCA 90 bp CTGGCCAGCCTTCTCCCTGATAGATTTTTGTCACTGGGACCCTCTCTAGAGTCTCCTTATGGACCTCTGTaGAAATTCATTCTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: LASLLPDRFLSLGPSLESPYGPL*KFILGF
Trigger: GAACCCCAGAATGAATTTTCACAGAGGTCCATAAGG...AGACTCTAGAGAGGGTCCCAGTGACAAAAATCTATCAGGGAGAAGGCTGGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR GCA 90 bp AACAGTCTTTGGGGTCAAAAGATCTTATGCGCCTACAGAAAGTTCTTAGAGCTCGTCTCCACTCGCGGCTaGTGCATCATGTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: NSLWGQKILCAYRKFLELVSTRG*CIMSGA
Trigger: TGCACCAGACATGATGCAGCAGCCGCGAGTGGAGAC...GAGCTCTAAGAACTTTCTGTAGGCGCATAAGATCTTTTGACCCCAAAGACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp TGTACACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCAGCCGCCAGTTCGAGGTaGTCCACCACTGGATCCAGC +
Preference number: 4 (lower is better)
Translates to: CTHLTDLLFTILGPKFYPAASSR*STTGSS
Trigger: GCTGGATCCAGTGGTGGAGCACCTCGAACTGGCGGC...TGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp AAGCTCTGCCCCTGGCTAAGCAATTTTCACCAATGGCTAAGCCATCTGTCTTGCATGGCACAACATCAGTaGCAGCAGCAGGTAGAGTAT +
Preference number: 4 (lower is better)
Translates to: KLCPWLSNFHQWLSHLSCMAQHQ*QQQVEY
Trigger: ATACTCTACCTGCTGCTGGCACTGATGTTGTGCCAT...GCAAGACAGATGGCTTAGCCATTGGTGAAAATTGCTTAGCCAGGGGCAGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp GCTTCACAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAAGTGGCGGAGGATGCGTGGGCTaGAAGGTTTGGAGAGCGAGT +
Preference number: 4 (lower is better)
Translates to: ASQIDIVFDSQQPHDRSGGGCVG*KVWRAS
Trigger: ACTCGCTCTCCAAACCTTGCAGCCCACGCATCCTCC...GCCACTTCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTGTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp CTAAGCAATTTTCACCAATGGCTAAGCCATCTGTCTTGCCCCCTCTTCTCAAAGAACAGACACAGGCAGTaGGATGGGGTTGCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: LSNFHQWLSHLSCPLFSKNRHRQ*DGVALL
Trigger: TAGAAGGGCAACCCCATCCCACTGCCTGTGTCTGTT...CTTTGAGAAGAGGGGGCAAGACAGATGGCTTAGCCATTGGTGAAAATTGCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp ACACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCAGGAGCGCTATCAGTGGCTTaGTCAAGCTCTGCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: THLTDLLFTILGPKFYPGALSVA*SSSAPG
Trigger: GCCAGGGGCAGAGCTTGACCAAGCCACTGATAGCGC...TCCTGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp ACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCAGGACAGCGCTATCAGTGGCTTaGTCAAGCTCTGCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: TLNRPLVYHFRAKILSRTALSVA*SSSAPG
Trigger: GCCAGGGGCAGAGCTTGACCAAGCCACTGATAGCGC...TGTCCTGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp CTCATAATACCCCCTTATGCTTCACTTCTCAAACAGGGTACAATGTATCACCTGGTCTCCTGGGGCTTCTaGCCAGCCTTCTCCCTGATA +
Preference number: 4 (lower is better)
Translates to: LIIPPYASLLKQGTMYHLVSWGF*PAFSLI
Trigger: TATCAGGGAGAAGGCTGGCCAGAAGCCCCAGGAGAC...CAGGTGATACATTGTACCCTGTTTGAGAAGTGAAGCATAAGGGGGTATTATGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp TTGACTCACAACAACCCCATGACAGAAGTGGCCCACGTAACATTGAGGCTCAAAGGCCCTGAGTATTTATaGGACAAAAGAGGGGGACCT +
Preference number: 4 (lower is better)
Translates to: LTHNNPMTEVAHVTLRLKGPEYL*DKRGGP
Trigger: AGGTCCCCCTCTTTTGTCCCATAAATACTCAGGGCC...TTTGAGCCTCAATGTTACGTGGGCCACTTCTGTCATGGGGTTGTTGTGAGTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp ACACCAGGAACCTGCAGCATTGACTTGAGGAAGGAGTCCGGGGTCAGGCCAGTCATCTCTAAAATGGGATaGTCACAGCATAGCTATAAT +
Preference number: 4 (lower is better)
Translates to: TPGTCSIDLRKESGVRPVISKMG*SQHSYN
Trigger: ATTATAGCTATGCTGTGACCATCCCATTTTAGAGAT...GACTGGCCTGACCCCGGACTCCTTCCTCAAGTCAATGCTGCAGGTTCCTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR TCA 90 bp CTGGCCAGCCTTCTCCCTGATAGATTTTTGTCACTGGGACCCTCTCTAGAGTCTACATTGAGGCTCAAATaGATTAATTGGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: LASLLPDRFLSLGPSLESTLRLK*INWPRP
Trigger: TGGCCTTGGCCAATTAATTCATTTGAGCCTCAATGT...AGACTCTAGAGAGGGTCCCAGTGACAAAAATCTATCAGGGAGAAGGCTGGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp GTTGATCTGAAAGCCCAGAGAAGCTTCCTGTTCCTTCAACAGTCTTTGGGGTCAGCAGTGGGATGGGGTTaGCCTTCTATTGATCCAAAT +
Preference number: 4 (lower is better)
Translates to: VDLKAQRSFLFLQQSLGSAVGWG*PSIDPN
Trigger: ATTTGGATCAATAGAAGGGCAACCCCATCCCACTGC...TGACCCCAAAGACTGTTGAAGGAACAGGAAGCTTCTCTGGGCTTTCAGATCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp TGGGGGTCAGGTGTGGATAAAGTTGTCTATCATGTACCTTACTTGGTAATTACCGGTCCTTCACTCACATaGCAGAGCCCTAAGACAGGG +
Preference number: 4 (lower is better)
Translates to: WGSGVDKVVYHVPYLVITGPSLT*QSPKTG
Trigger: CCCTGTCTTAGGGCTCTGGCATGTGAGTGAAGGACC...GGTAATTACCAAGTAAGGTACATGATAGACAACTTTATCCACACCTGACCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp TCACAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAAGTGGCCCAGATTGGTGGGAGGAATaGCAAGGCCAGTGGTACCCA +
Preference number: 4 (lower is better)
Translates to: SQIDIVFDSQQPHDRSGPDWWEE*QGQWYP
Trigger: TGGGTACCACTGGCCTTGCCATTCCTCCCACCAATC...TGGGCCACTTCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR TCA 90 bp TGTACACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCACCTGCAGCATTGACTTaGGGAAGGAGTCCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: CTHLTDLLFTILGPKFYPPAALT*GRSPGS
Trigger: TGACCCCGGACTCCTTCCTCAAGTCAATGCTGCAGG...TGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp CAGTGCAATAGGCATTCTCATAATACCCCCTTATGCTTCACTTCTCAAACAGGGACACAGGCAGTGGGATaGGGTTGCCCTTCTATTGAT +
Preference number: 4 (lower is better)
Translates to: QCNRHSHNTPLCFTSQTGTQAVG*GCPSID
Trigger: ATCAATAGAAGGGCAACCCCATCCCACTGCCTGTGT...CCCTGTTTGAGAAGTGAAGCATAAGGGGGTATTATGAGAATGCCTATTGCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp TGGGGGTCAGGTGTGGATAAAGTTGTCTATCATGTACCTTACTTGGTAATTACCCTGTCTGACCCCAGTTaGCCCATTTCTCAGACTTGG +
Preference number: 4 (lower is better)
Translates to: WGSGVDKVVYHVPYLVITLSDPS*PISQTW
Trigger: CCAAGTCTGAGAAATGGGCCAACTGGGGTCAGACAG...GGTAATTACCAAGTAAGGTACATGATAGACAACTTTATCCACACCTGACCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR CAA 72 bp CTGATGCTGAAGGCATCTAATCCGTGGCATGGAGGGTaGCAAAAGTCTAAGGCAAAAATGAACCAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LMLKASNPWHGG*QKSKAKMNQGS
Trigger: AGAACCCTGGTTCATTTTTGCCTTAGACTTTTGCAACCCTCCATGCCACGGATTAGATGCCTTCAGCATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR TCA 90 bp TCACAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAAGTGGCCCATCCAGGACAGAGAGTTaGTCTGAAAGCCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SQIDIVFDSQQPHDRSGPSRTES*SESPEK
Trigger: CTTCTCTGGGCTTTCAGATCAACTCTCTGTCCTGGA...TGGGCCACTTCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR TCA 90 bp TGGGGGTCAGGTGTGGATAAAGTTGTCTATCATGTACCTTACTTGGTAATTACCTCTGATAGGAGCTCTTaGGAAGCCTTGGGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: WGSGVDKVVYHVPYLVITSDRSS*EALGSS
Trigger: TGAAGACCCCAAGGCTTCTCAAGAGCTCCTATCAGA...GGTAATTACCAAGTAAGGTACATGATAGACAACTTTATCCACACCTGACCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR GCA 90 bp TGTACACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCACCCAGCCTCAGCTCATaGACCAAAACCCATCCAACC +
Preference number: 4 (lower is better)
Translates to: CTHLTDLLFTILGPKFYPPSLSS*TKTHPT
Trigger: GGTTGGATGGGTTTTGGTGCATGAGCTGAGGCTGGG...TGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR GCA 90 bp TGTACACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCATACCCTACTCCCACTTaGCTGCCCCTAGAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: CTHLTDLLFTILGPKFYPYPTPT*LPLELS
Trigger: GGACAACTCTAGGGGCAGGCAAGTGGGAGTAGGGTA...TGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp ACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCAGGACACCCATTTCTCAGACTTaGGGATGCAGACTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TLNRPLVYHFRAKILSRTPISQT*GCRLRQ
Trigger: CTGCCTCAGTCTGCATCCCCAAGTCTGAGAAATGGG...TGTCCTGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp TGTACACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCATTTCCAAAGCCCTTCTaGTGCCTGAGCGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: CTHLTDLLFTILGPKFYPFPKPF*CLSGLL
Trigger: CAGCAAGCCGCTCAGGCACCAGAAGGGCTTTGGAAA...TGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp ACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCAGGACACCTCTCTCCCTTCATTaGAATGGACCCAAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TLNRPLVYHFRAKILSRTPLSLH*NGPKAP
Trigger: TGGAGCCTTGGGTCCATTCCAATGAAGGGAGAGAGG...TGTCCTGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR TCA 90 bp AACAGTCTTTGGGGTCAAAAGATCTTATGCGCCTACAGAAAGTTCTTAGAGCTCTGGCTATCCTGGGCCTaGCTTCTCATCTCTAAAATG +
Preference number: 4 (lower is better)
Translates to: NSLWGQKILCAYRKFLELWLSWA*LLISKM
Trigger: CATTTTAGAGATGAGAAGTCAGGCCCAGGATAGCCA...GAGCTCTAAGAACTTTCTGTAGGCGCATAAGATCTTTTGACCCCAAAGACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR GCA 90 bp GCTTCACAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAAGTGGCATGGCACAACATCAGTaGCAGCAGCAGGTAGAGTAT +
Preference number: 4 (lower is better)
Translates to: ASQIDIVFDSQQPHDRSGMAQHQ*QQQVEY
Trigger: ATACTCTACCTGCTGCTGGCACTGATGTTGTGCCAT...GCCACTTCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTGTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp CGCCTACAGAAAGTTCTTAGAGCTCAAAACAACATCTTACAGGTTTTTGGCTTCGGCTTGGTCAAGCTCTaGCCCTGGCTAAGCAATTTT +
Preference number: 4 (lower is better)
Translates to: RLQKVLRAQNNILQVFGFGLVKL*PWLSNF
Trigger: AAAATTGCTTAGCCAGGGGCAGAGCTTGACCAAGCC...GAAGCCAAAAACCTGTAAGATGTTGTTTTGAGCTCTAAGAACTTTCTGTAGGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp ACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCAGGACAGGCTTGGTCAAGCTCTaGCCCTGGCTAAGCAATTTT +
Preference number: 4 (lower is better)
Translates to: TLNRPLVYHFRAKILSRTGLVKL*PWLSNF
Trigger: AAAATTGCTTAGCCAGGGGCAGAGCTTGACCAAGCC...TGTCCTGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp ACACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCAGGAGAATGGCAAGGCCAGTaGTACCCAGGTAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: THLTDLLFTILGPKFYPGEWQGQ*YPGRSS
Trigger: AGAACTTCTACCTGGGTACCACTGGCCTTGCCATTC...TCCTGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp GTTGATCTGAAAGCCCAGAGAAGCTTCCTGTTCCTTCAACAGTCTTTGGGGTCACACACATTGTGTAAGTaGGTGAAATGGGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: VDLKAQRSFLFLQQSLGSHTLCK*VKWDFL
Trigger: CAAGAAATCCCATTTCACCCACTTACACAATGTGTG...TGACCCCAAAGACTGTTGAAGGAACAGGAAGCTTCTCTGGGCTTTCAGATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp GATCTTATGCGCCTACAGAAAGTTCTTAGAGCTCAAAACAACATCTTACAGGTTTTGCTGGGTCAGTTTTaGAAACCCTGGGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: DLMRLQKVLRAQNNILQVLLGQF*KPWGCA
Trigger: AGCACAGCCCCAGGGTTTCCAAAACTGACCCAGCAA...AACCTGTAAGATGTTGTTTTGAGCTCTAAGAACTTTCTGTAGGCGCATAAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp TCACAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAAGTGGCCCAAAGGCATCTAATCCGTaGCATGGAGGGTTGCAAAAG +
Preference number: 4 (lower is better)
Translates to: SQIDIVFDSQQPHDRSGPKASNP*HGGLQK
Trigger: CTTTTGCAACCCTCCATGCCACGGATTAGATGCCTT...TGGGCCACTTCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR GCA 90 bp TCACAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAAGTGGCCCACGTGGCATGGAGGGTTaGAAAAGTCTAAGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: SQIDIVFDSQQPHDRSGPRGMEG*KSLRQK
Trigger: TTTTTGCCTTAGACTTTTGCAACCCTCCATGCCACG...TGGGCCACTTCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR GCA 90 bp ACACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCAGGATGTTTGTGTTTCCTTTaGCCCCTTCACCTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: THLTDLLFTILGPKFYPGCLCFL*PLHLPL
Trigger: CAAGGGAAGGTGAAGGGGGCAAAGGAAACACAAACA...TCCTGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR GCA 90 bp CAGTGCAATAGGCATTCTCATAATACCCCCTTATGCTTCACTTCTCAAACAGGGCATAATACCCCCTTATaGTTCACTTCTCAAACAGGG +
Preference number: 4 (lower is better)
Translates to: QCNRHSHNTPLCFTSQTGHNTPL*FTSQTG
Trigger: CCCTGTTTGAGAAGTGAAGCATAAGGGGGTATTATG...CCCTGTTTGAGAAGTGAAGCATAAGGGGGTATTATGAGAATGCCTATTGCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp ACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCAGGACAGCTCTTGAGAAGCCTTaGGGTCTTCAGTTAGTTAGG +
Preference number: 4 (lower is better)
Translates to: TLNRPLVYHFRAKILSRTALEKP*GLQLVR
Trigger: CCTAACTAACTGAAGACCCCAAGGCTTCTCAAGAGC...TGTCCTGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
3UTR CAA 72 bp TCTCTATACCCTACTCCCACTTGCCTGCCCCTAGAGTaGTCCATTCCATTCTGTTTATCTTTCGTTTTTATG +
Preference number: 4 (lower is better)
Translates to: SLYPTPTCLPLE*SIPFCLSFVFM
Trigger: CATAAAAACGAAAGATAAACAGAATGGAATGGACAACTCTAGGGGCAGGCAAGTGGGAGTAGGGTATAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR TCA 90 bp CAAAATGCTTCACAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAGACAGAGAGTTGATCTaGAAGCCCAGAGAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: QNASQIDIVFDSQQPHDRDRELI*KPREAS
Trigger: GGAAGCTTCTCTGGGCTTTCAGATCAACTCTCTGTC...TCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTGTGAAGCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp CAAAATGCTTCACAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGACTCACACCAGGAACCTaGAGCATTGACTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: QNASQIDIVFDSQQPHDRLTPGT*SIDLRK
Trigger: CTTCCTCAAGTCAATGCTGCAGGTTCCTGGTGTGAG...TCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTGTGAAGCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR GCA 90 bp ACACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCAGGATCGCTCTCACTACCATaGCATAATGCGGGAGAAATA +
Preference number: 4 (lower is better)
Translates to: THLTDLLFTILGPKFYPGSLSLP*HNAGEI
Trigger: TATTTCTCCCGCATTATGGCATGGTAGTGAGAGCGA...TCCTGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp CAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAAGTGGCCCACGTTCCTTCAACAGTCTTTaGGGTCAAAAGATCTTATGC +
Preference number: 4 (lower is better)
Translates to: QIDIVFDSQQPHDRSGPRSFNSL*GQKILC
Trigger: GCATAAGATCTTTTGACCCCAAAGACTGTTGAAGGA...ACGTGGGCCACTTCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CCA 90 bp CAGTGCAATAGGCATTCTCATAATACCCCCTTATGCTTCACTTCTCAAACAGGGTTCTCATCTCTAAAATaGGATGGTCACAGCATAGCT +
Preference number: 4 (lower is better)
Translates to: QCNRHSHNTPLCFTSQTGFSSLK*DGHSIA
Trigger: AGCTATGCTGTGACCATCCCATTTTAGAGATGAGAA...CCCTGTTTGAGAAGTGAAGCATAAGGGGGTATTATGAGAATGCCTATTGCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR TCA 90 bp TGTACACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCAACAGCTGAGTGGCTATaGGAAAAAGATGCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: CTHLTDLLFTILGPKFYPTAEWL*EKDAVS
Trigger: ACTGACAGCATCTTTTTCTCATAGCCACTCAGCTGT...TGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGTGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR TCA 90 bp TGGGGGTCAGGTGTGGATAAAGTTGTCTATCATGTACCTTACTTGGTAATTACCAACATCTGCACATTTTaGGATTTCATGGCACATGAC +
Preference number: 4 (lower is better)
Translates to: WGSGVDKVVYHVPYLVITNICTF*DFMAHD
Trigger: GTCATGTGCCATGAAATCTCAAAATGTGCAGATGTT...GGTAATTACCAAGTAAGGTACATGATAGACAACTTTATCCACACCTGACCCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CCA 90 bp CAAAATGCTTCACAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAACAGAAAGGAAGGACTaGACCTTGGGTTTTGGCACT +
Preference number: 4 (lower is better)
Translates to: QNASQIDIVFDSQQPHDRTERKD*TLGFGT
Trigger: AGTGCCAAAACCCAAGGTCCAGTCCTTCCTTTCTGT...TCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTGTGAAGCATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR TCA 90 bp TCACAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAAGTGGCCCAAGATTTCATGGCACATaGCCTTTTACATCTTGTACA +
Preference number: 4 (lower is better)
Translates to: SQIDIVFDSQQPHDRSGPRFHGT*PFTSCT
Trigger: TGTACAAGATGTAAAAGGTCATGTGCCATGAAATCT...TGGGCCACTTCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
3UTR CAA 72 bp TCAGGTGTGGATAAAGTTGTCTATCATGTACCTTACTaGGTAATTACCGATCACTCAATGTTTTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SGVDKVVYHVPY*VITDHSMFCWR
Trigger: CCTCCAACAAAACATTGAGTGATCGGTAATTACCAAGTAAGGTACATGATAGACAACTTTATCCACACCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS GCA 90 bp CCAGACCCCACAGCAGGCGCTGCAGCGGTTGCCGCCAGTTCGAGGTaGTCCACCACTGGATCCAGCTCGGGGGCATGTGGCTCACCCACC +
Preference number: 5 (lower is better)
Translates to: PDPTAGAAAVAASSR*STTGSSSGACGSPT
Trigger: GGTGGGTGAGCCACATGCCCCCGAGCTGGATCCAGTGGTGGAGCACCTCGAACTGGCGGCAACCGCTGCAGCGCCTGCTGTGGGGTCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS CCA 90 bp AGCAGGCGCTGCAGCGGTTGCCGCCAGTTCGAGGTGCTCCACCACTaGATCCAGCTCGGGGGCATGTGGCTCACCCACCAGCGCACCCAG +
Preference number: 5 (lower is better)
Translates to: SRRCSGCRQFEVLHH*IQLGGMWLTHQRTQ
Trigger: CTGGGTGCGCTGGTGGGTGAGCCACATGCCCCCGAGCTGGATCCAGTGGTGGAGCACCTCGAACTGGCGGCAACCGCTGCAGCGCCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS CCA 90 bp GCAGGCAGAGCACTGAGCACCAGCAGCAGGAGAGCCGGTAGCAGGTaGCGCCACACCGCGGCCACGACAGGCCACAAGGAGCTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: AGRALSTSSRRAGSR*RHTAATTGHKELSR
Trigger: CCTGCTGAGCTCCTTGTGGCCTGTCGTGGCCGCGGTGTGGCGCCACCTGCTACCGGCTCTCCTGCTGCTGGTGCTCAGTGCTCTGCCTGC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS CCA 90 bp CGCCAGTTCGAGGTGCTCCACCACTGGATCCAGCTCGGGGGCATGTaGCTCACCCACCAGCGCACCCAGCCATGCCTCGTGACCCAGGCT +
Preference number: 5 (lower is better)
Translates to: RQFEVLHHWIQLGGM*LTHQRTQPCLVTQA
Trigger: AGCCTGGGTCACGAGGCATGGCTGGGTGCGCTGGTGGGTGAGCCACATGCCCCCGAGCTGGATCCAGTGGTGGAGCACCTCGAACTGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CAA 90 bp CTCCCCGTGGGGTCTCAGGCCCTAGGCCAGGGCTCAACAGACACAGGCAGTGGGTCAGATGGCCTGGCCTaGCCACTGGCAACTGGCTAT +
Preference number: 5 (lower is better)
Translates to: LPVGSQALGQGSTDTGSGSDGLA*PLATGY
Trigger: ATAGCCAGTTGCCAGTGGCAAGGCCAGGCCATCTGA...CCCACTGCCTGTGTCTGTTGAGCCCTGGCCTAGGGCCTGAGACCCCACGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CAA 90 bp TGCAAGGTTTGGAGAGCGAGTGAGTTGAGGTCTCCTGGGGCTTCTGGCCAGCCTCAGGCGCTGCAGCGGTaGCCGCCAGTTCGAGGTGCT +
Preference number: 5 (lower is better)
Translates to: CKVWRASELRSPGASGQPQALQR*PPVRGA
Trigger: AGCACCTCGAACTGGCGGCAACCGCTGCAGCGCCTG...AGGCTGGCCAGAAGCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CAA 90 bp CTCCCCGTGGGGTCTCAGGCCCTAGGCCAGGGCTCAACAGACACAGGCAGTGGGAGTGGAAAGAGGGGATaGGTGGGAGGAATGGCAAGG +
Preference number: 5 (lower is better)
Translates to: LPVGSQALGQGSTDTGSGSGKRG*VGGMAR
Trigger: CCTTGCCATTCCTCCCACCAATCCCCTCTTTCCACT...CCCACTGCCTGTGTCTGTTGAGCCCTGGCCTAGGGCCTGAGACCCCACGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CAA 90 bp GGGGTCTGGGCCCTGCCAAGGCAGGGAGCCCTGATCCCATTGCCCTCCCTCTCCAGGAAGGACTGGACCTaGGGTTTTGGCACTGATGCT +
Preference number: 5 (lower is better)
Translates to: GVWALPRQGALIPLPSLSRKDWT*GFGTDA
Trigger: AGCATCAGTGCCAAAACCCAAGGTCCAGTCCTTCCT...GGAGAGGGAGGGCAATGGGATCAGGGCTCCCTGCCTTGGCAGGGCCCAGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS GCA 90 bp CCCGATGGTATCTGTCTCCACTCGCGGCTGCTGCATCATGTCTGGTaGACCTGGGGAGAGGGCCAGGGTCTTGAAGATGCCTGGGACCTC +
Preference number: 5 (lower is better)
Translates to: PDGICLHSRLLHHVW*TWGEGQGLEDAWDL
Trigger: GAGGTCCCAGGCATCTTCAAGACCCTGGCCCTCTCCCCAGGTGCACCAGACATGATGCAGCAGCCGCGAGTGGAGACAGATACCATCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS CCA 90 bp GGTATCTGTCTCCACTCGCGGCTGCTGCATCATGTCTGGTGCACCTaGGGAGAGGGCCAGGGTCTTGAAGATGCCTGGGACCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: GICLHSRLLHHVWCT*GEGQGLEDAWDLWA
Trigger: TGCCCAGAGGTCCCAGGCATCTTCAAGACCCTGGCCCTCTCCCCAGGTGCACCAGACATGATGCAGCAGCCGCGAGTGGAGACAGATACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS CCA 90 bp AGCCCCGATGGTATCTGTCTCCACTCGCGGCTGCTGCATCATGTCTaGTGCACCTGGGGAGAGGGCCAGGGTCTTGAAGATGCCTGGGAC +
Preference number: 5 (lower is better)
Translates to: SPDGICLHSRLLHHV*CTWGEGQGLEDAWD
Trigger: GTCCCAGGCATCTTCAAGACCCTGGCCCTCTCCCCAGGTGCACCAGACATGATGCAGCAGCCGCGAGTGGAGACAGATACCATCGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS GCA 90 bp AGATGCCTGGGACCTCTGGGCAGTTACCTAAGTCATGTTGCTTCCTaGAGCGCCCAGGACGGCCTGGCAGGCAGATCCAAGTCCCCACTC +
Preference number: 5 (lower is better)
Translates to: RCLGPLGSYLSHVAS*SAQDGLAGRSKSPL
Trigger: GAGTGGGGACTTGGATCTGCCTGCCAGGCCGTCCTGGGCGCTGCAGGAAGCAACATGACTTAGGTAACTGCCCAGAGGTCCCAGGCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS GCA 90 bp CAGCAGGTGGGAGCCAGTGGTGAAGAGTGCATGGCACAACATCAGTaGCAGCAGCAGGTAGAGTATCCCCTCCAGACCCCACAGCAGGCG +
Preference number: 5 (lower is better)
Translates to: QQVGASGEECMAQHQ*QQQVEYPLQTPQQA
Trigger: CGCCTGCTGTGGGGTCTGGAGGGGATACTCTACCTGCTGCTGGCACTGATGTTGTGCCATGCACTCTTCACCACTGGCTCCCACCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CAA 90 bp CCTCCCTCTCCCCGTGGGGTCTCAGGCCCTAGGCCAGGGCTCAACAGACACAGGCCGTGGCATGGAGGGTaGCAAAAGTCTAAGGCAAAA +
Preference number: 5 (lower is better)
Translates to: PPSPRGVSGPRPGLNRHRPWHGG*QKSKAK
Trigger: TTTTGCCTTAGACTTTTGCAACCCTCCATGCCACGG...CCTGTGTCTGTTGAGCCCTGGCCTAGGGCCTGAGACCCCACGGGGAGAGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS TCA 90 bp CGGCCACGACAGGCCACAAGGAGCTCAGCAGGTGGGAGCCAGTGGTaGAGAGTGCATGGCACAACATCAGTGCCAGCAGCAGGTAGAGTA +
Preference number: 5 (lower is better)
Translates to: RPRQATRSSAGGSQW*RVHGTTSVPAAGRV
Trigger: TACTCTACCTGCTGCTGGCACTGATGTTGTGCCATGCACTCTTCACCACTGGCTCCCACCTGCTGAGCTCCTTGTGGCCTGTCGTGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS CCA 90 bp CGTGGGGTCTCAGGCCCTAGGCCAGGGCTCAACAGACACAGGCAGTaGGATGGGGTTGCCCTTCTATTGATCCAAATCCTGAGTGTCGCC +
Preference number: 5 (lower is better)
Translates to: RGVSGPRPGLNRHRQ*DGVALLLIQILSVA
Trigger: GGCGACACTCAGGATTTGGATCAATAGAAGGGCAACCCCATCCCACTGCCTGTGTCTGTTGAGCCCTGGCCTAGGGCCTGAGACCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CAA 90 bp GTGGGCTGCAAGGTTTGGAGAGCGAGTGAGTTGAGGTCTCCTGGGGCTTCTGGCACCTGCAGCATTGACTaGAGGAAGGAGTCCGGGGTC +
Preference number: 5 (lower is better)
Translates to: VGCKVWRASELRSPGASGTCSID*RKESGV
Trigger: GACCCCGGACTCCTTCCTCAAGTCAATGCTGCAGGT...GCCAGAAGCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCAGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CAA 90 bp GTGGGCTGCAAGGTTTGGAGAGCGAGTGAGTTGAGGTCTCCTGGGGCTTCTGGCGCTAAGCCATCTGTCTaGCCCCCTCTTCTCAAAGCC +
Preference number: 5 (lower is better)
Translates to: VGCKVWRASELRSPGASGAKPSV*PPLLKA
Trigger: GGCTTTGAGAAGAGGGGGCAAGACAGATGGCTTAGC...GCCAGAAGCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCAGCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CAA 90 bp CTCCCCGTGGGGTCTCAGGCCCTAGGCCAGGGCTCAACAGACACAGGCAGTGGGCACTTAACCGACCTCTaGTTTACCATTTTAGGGCCA +
Preference number: 5 (lower is better)
Translates to: LPVGSQALGQGSTDTGSGHLTDL*FTILGP
Trigger: TGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTG...CCCACTGCCTGTGTCTGTTGAGCCCTGGCCTAGGGCCTGAGACCCCACGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CAA 90 bp GGGGTCTGGGCCCTGCCAAGGCAGGGAGCCCTGATCCCATTGCCCTCCCTCTCCAGCTCTCTAGCTTTATaGCCTGTTATCTCTATACCC +
Preference number: 5 (lower is better)
Translates to: GVWALPRQGALIPLPSLSSSLAL*PVISIP
Trigger: GGGTATAGAGATAACAGGCAATAAAGCTAGAGAGCT...GGAGAGGGAGGGCAATGGGATCAGGGCTCCCTGCCTTGGCAGGGCCCAGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CAA 90 bp AGATGCTGTCAGTTGCCAAGGGGGCCCCACGGGTATCATCACATCCATATGGGCACCTGCAGCATTGACTaGAGGAAGGAGTCCGGGGTC +
Preference number: 5 (lower is better)
Translates to: RCCQLPRGPHGYHHIHMGTCSID*RKESGV
Trigger: GACCCCGGACTCCTTCCTCAAGTCAATGCTGCAGGT...GCCCATATGGATGTGATGATACCCGTGGGGCCCCCTTGGCAACTGACAGCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CAA 90 bp ACACCAGGAACCTGCAGCATTGACTTGAGGAAGGAGTCCGGGGTCAGGCCAGTCGCTAAGCCATCTGTCTaGCCCCCTCTTCTCAAAGCC +
Preference number: 5 (lower is better)
Translates to: TPGTCSIDLRKESGVRPVAKPSV*PPLLKA
Trigger: GGCTTTGAGAAGAGGGGGCAAGACAGATGGCTTAGC...GACTGGCCTGACCCCGGACTCCTTCCTCAAGTCAATGCTGCAGGTTCCTGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CAA 90 bp TTGCCAAGGGGGCCCCACGGGTATCATCACATCCATATGGGCGCTATCAGTGGCAGTGGAAAGAGGGGATaGGTGGGAGGAATGGCAAGG +
Preference number: 5 (lower is better)
Translates to: LPRGPHGYHHIHMGAISGSGKRG*VGGMAR
Trigger: CCTTGCCATTCCTCCCACCAATCCCCTCTTTCCACT...GCCACTGATAGCGCCCATATGGATGTGATGATACCCGTGGGGCCCCCTTGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CAA 90 bp GGAGGAGGATGCGTGGGCTGCAAGGTTTGGAGAGCGAGTGAGTTGAGGTCTCCTGCCCATTTCTCAGACTaGGGGATGCAGACTGAGGCA +
Preference number: 5 (lower is better)
Translates to: GGGCVGCKVWRASELRSPAHFSD*GMQTEA
Trigger: TGCCTCAGTCTGCATCCCCAAGTCTGAGAAATGGGC...AGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCAGCCCACGCATCCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CAA 90 bp CTCCCTCTCCCCGTGGGGTCTCAGGCCCTAGGCCAGGGCTCAACAGACACAGGCCTTCAGTTAGTTAGGTaGTTTGTGTTTCCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: LPLPVGSQALGQGSTDTGLQLVR*FVFPLP
Trigger: GGGCAAAGGAAACACAAACAACCTAACTAACTGAAG...GCCTGTGTCTGTTGAGCCCTGGCCTAGGGCCTGAGACCCCACGGGGAGAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CAA 90 bp GGAGGAGGATGCGTGGGCTGCAAGGTTTGGAGAGCGAGTGAGTTGAGGTCTCCTTCCTCTCTCCCTTCATaGGAATGGACCCAAGGCTCC +
Preference number: 5 (lower is better)
Translates to: GGGCVGCKVWRASELRSPSSLPS*EWTQGS
Trigger: GGAGCCTTGGGTCCATTCCAATGAAGGGAGAGAGGA...AGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCAGCCCACGCATCCTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CAA 90 bp GTGCCTGAGCGGCTTGCTGGGTCAGTTTTGGAAACCCTGGGGCTGTGCTGTCCCTCTAATTACTGCCCCTaGGGCCCATCTGCCTTGTTT +
Preference number: 5 (lower is better)
Translates to: VPERLAGSVLETLGLCCPSNYCP*GPSALF
Trigger: AAACAAGGCAGATGGGCCCAAGGGGCAGTAATTAGA...GGGACAGCACAGCCCCAGGGTTTCCAAAACTGACCCAGCAAGCCGCTCAGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS CCA 90 bp TGGGATGGGGTTGCCCTTCTATTGATCCAAATCCTGAGTGTCGCCTaGGTGAGTCATGGAGGTGAGGAGGCCCACAAGGCTCAGCAGTGT +
Preference number: 5 (lower is better)
Translates to: WDGVALLLIQILSVA*VSHGGEEAHKAQQC
Trigger: ACACTGCTGAGCCTTGTGGGCCTCCTCACCTCCATGACTCACCCAGGCGACACTCAGGATTTGGATCAATAGAAGGGCAACCCCATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CAA 90 bp GGGGGCCCCACGGGTATCATCACATCCATATGGGCGCTATCAGTGGCTTGGTCAGGCCAAGGCCACACATaGTGTAAGTGGGTGAAATGG +
Preference number: 5 (lower is better)
Translates to: GGPTGIITSIWALSVAWSGQGHT*CKWVKW
Trigger: CCATTTCACCCACTTACACAATGTGTGGCCTTGGCC...TGACCAAGCCACTGATAGCGCCCATATGGATGTGATGATACCCGTGGGGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CAA 90 bp GGAGGAGGATGCGTGGGCTGCAAGGTTTGGAGAGCGAGTGAGTTGAGGTCTCCTACTGGACCTTGGGTTTaGGCACTGATGCTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: GGGCVGCKVWRASELRSPTGPWV*ALMLKA
Trigger: TGCCTTCAGCATCAGTGCCAAAACCCAAGGTCCAGT...AGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCAGCCCACGCATCCTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CAA 90 bp ACACCAGGAACCTGCAGCATTGACTTGAGGAAGGAGTCCGGGGTCAGGCCAGTCCTCCCTGATAGATTTTaGTCACTGGGACCCTCTCTA +
Preference number: 5 (lower is better)
Translates to: TPGTCSIDLRKESGVRPVLPDRF*SLGPSL
Trigger: TAGAGAGGGTCCCAGTGACAAAAATCTATCAGGGAG...GACTGGCCTGACCCCGGACTCCTTCCTCAAGTCAATGCTGCAGGTTCCTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CAA 90 bp TCAATGTTTTGTTGGAGGGGCCAGCAAGTGAACGAACGGCCAGCATTCAGGGCAGGGGTTGCCCTTCTATaGATCCAAATCCTGAGTGTC +
Preference number: 5 (lower is better)
Translates to: SMFCWRGQQVNERPAFRAGVALL*IQILSV
Trigger: GACACTCAGGATTTGGATCAATAGAAGGGCAACCCC...TGCCCTGAATGCTGGCCGTTCGTTCACTTGCTGGCCCCTCCAACAAAACATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CAA 90 bp TGGGGTCTTCAGTTAGTTAGGTTGTTTGTGTTTCCTTTGCCCCCTTCACCTTCCCCCCTTCACCTTCCCTaGAGTAGCCTGGTAGGACTC +
Preference number: 5 (lower is better)
Translates to: WGLQLVRLFVFPLPPSPSPLHLP*SSLVGL
Trigger: GAGTCCTACCAGGCTACTCAAGGGAAGGTGAAGGGG...GGAAGGTGAAGGGGGCAAAGGAAACACAAACAACCTAACTAACTGAAGACCCCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CAA 90 bp TCAATGTTTTGTTGGAGGGGCCAGCAAGTGAACGAACGGCCAGCATTCAGGGCATTGGGCCCATCTGCCTaGTTTTACCCTTCCCTTTAC +
Preference number: 5 (lower is better)
Translates to: SMFCWRGQQVNERPAFRALGPSA*FYPSLY
Trigger: GTAAAGGGAAGGGTAAAACAAGGCAGATGGGCCCAA...TGCCCTGAATGCTGGCCGTTCGTTCACTTGCTGGCCCCTCCAACAAAACATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CAA 90 bp TGCAAGGTTTGGAGAGCGAGTGAGTTGAGGTCTCCTGGGGCTTCTGGCCAGCCTTTCCTTCAACAGTCTTaGGGGTCAAAAGATCTTATG +
Preference number: 5 (lower is better)
Translates to: CKVWRASELRSPGASGQPFLQQS*GSKDLM
Trigger: CATAAGATCTTTTGACCCCAAAGACTGTTGAAGGAA...AGGCTGGCCAGAAGCCCCAGGAGACCTCAACTCACTCGCTCTCCAAACCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CAA 90 bp CTAAGCAATTTTCACCAATGGCTAAGCCATCTGTCTTGCCCCCTCTTCTCAAAGCTTGCTGGGTCAGTTTaGGAAACCCTGGGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: LSNFHQWLSHLSCPLFSKLAGSV*ETLGLC
Trigger: GCACAGCCCCAGGGTTTCCAAAACTGACCCAGCAAG...CTTTGAGAAGAGGGGGCAAGACAGATGGCTTAGCCATTGGTGAAAATTGCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CAA 90 bp CTGGCTAAGCAATTTTCACCAATGGCTAAGCCATCTGTCTTGCCCCCTCTTCTCTCACTCAATGTTTTGTaGGAGGGGCCAGCAAGTGAA +
Preference number: 5 (lower is better)
Translates to: LAKQFSPMAKPSVLPPLLSLNVL*EGPASE
Trigger: TTCACTTGCTGGCCCCTCCAACAAAACATTGAGTGA...GAGAAGAGGGGGCAAGACAGATGGCTTAGCCATTGGTGAAAATTGCTTAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CAA 90 bp ACTCACGCCCAGCCTCAGCTCATGCACCAAAACCCATCCAACCATGAGACCACACAGGTGTGGATAAAGTaGTCTATCATGTACCTTACT +
Preference number: 5 (lower is better)
Translates to: THAQPQLMHQNPSNHETTQVWIK*SIMYLT
Trigger: AGTAAGGTACATGATAGACAACTTTATCCACACCTG...TGTGGTCTCATGGTTGGATGGGTTTTGGTGCATGAGCTGAGGCTGGGCGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CAA 90 bp ACACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCAGGAAGGCAGGAGAATTGCTaGGACCTGGGAGGTGGAGCG +
Preference number: 5 (lower is better)
Translates to: THLTDLLFTILGPKFYPGRQENC*DLGGGA
Trigger: CGCTCCACCTCCCAGGTCCAAGCAATTCTCCTGCCT...TCCTGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CAA 90 bp TTGACTCACAACAACCCCATGACAGAAGTGGCCCACGTAACATTGAGGCTCAAACTCCCTGATAGATTTTaGTCACTGGGACCCTCTCTA +
Preference number: 5 (lower is better)
Translates to: LTHNNPMTEVAHVTLRLKLPDRF*SLGPSL
Trigger: TAGAGAGGGTCCCAGTGACAAAAATCTATCAGGGAG...TTTGAGCCTCAATGTTACGTGGGCCACTTCTGTCATGGGGTTGTTGTGAGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CAA 90 bp AACAGTCTTTGGGGTCAAAAGATCTTATGCGCCTACAGAAAGTTCTTAGAGCTCGCCCATTTCTCAGACTaGGGGATGCAGACTGAGGCA +
Preference number: 5 (lower is better)
Translates to: NSLWGQKILCAYRKFLELAHFSD*GMQTEA
Trigger: TGCCTCAGTCTGCATCCCCAAGTCTGAGAAATGGGC...GAGCTCTAAGAACTTTCTGTAGGCGCATAAGATCTTTTGACCCCAAAGACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CAA 90 bp TATGGGCGCTATCAGTGGCTTGGTCAAGCTCTGCCCCTGGCTAAGCAATTTTCATTCCTTCAACAGTCTTaGGGGTCAAAAGATCTTATG +
Preference number: 5 (lower is better)
Translates to: YGRYQWLGQALPLAKQFSFLQQS*GSKDLM
Trigger: CATAAGATCTTTTGACCCCAAAGACTGTTGAAGGAA...TGAAAATTGCTTAGCCAGGGGCAGAGCTTGACCAAGCCACTGATAGCGCCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CAA 90 bp TCAATGTTTTGTTGGAGGGGCCAGCAAGTGAACGAACGGCCAGCATTCAGGGCATATCATGTACCTTACTaGGTAATTACCGATCACTCA +
Preference number: 5 (lower is better)
Translates to: SMFCWRGQQVNERPAFRAYHVPY*VITDHS
Trigger: TGAGTGATCGGTAATTACCAAGTAAGGTACATGATA...TGCCCTGAATGCTGGCCGTTCGTTCACTTGCTGGCCCCTCCAACAAAACATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CAA 90 bp AAGCTCTGCCCCTGGCTAAGCAATTTTCACCAATGGCTAAGCCATCTGTCTTGCATGACCTTTTACATCTaGTACACACTTAACCGACCT +
Preference number: 5 (lower is better)
Translates to: KLCPWLSNFHQWLSHLSCMTFYI*YTLNRP
Trigger: AGGTCGGTTAAGTGTGTACAAGATGTAAAAGGTCAT...GCAAGACAGATGGCTTAGCCATTGGTGAAAATTGCTTAGCCAGGGGCAGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CAA 90 bp TCACAAATAGATATTGTCTTTGACTCACAACAACCCCATGACAGAAGTGGCCCACGATCACTCAATGTTTaGTTGGAGGGGCCAGCAAGT +
Preference number: 5 (lower is better)
Translates to: SQIDIVFDSQQPHDRSGPRSLNV*LEGPAS
Trigger: ACTTGCTGGCCCCTCCAACAAAACATTGAGTGATCG...TGGGCCACTTCTGTCATGGGGTTGTTGTGAGTCAAAGACAATATCTATTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CAA 90 bp TATGGGCGCTATCAGTGGCTTGGTCAAGCTCTGCCCCTGGCTAAGCAATTTTCAATATGTGGATCTAATTaGATGAGTATTGCCCATCAG +
Preference number: 5 (lower is better)
Translates to: YGRYQWLGQALPLAKQFSICGSN*MSIAHQ
Trigger: CTGATGGGCAATACTCATCAAATTAGATCCACATAT...TGAAAATTGCTTAGCCAGGGGCAGAGCTTGACCAAGCCACTGATAGCGCCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CAA 90 bp CTGGCCAGCCTTCTCCCTGATAGATTTTTGTCACTGGGACCCTCTCTAGAGTCTTGTTCTTGCCAAAAATaGTCTTGTTTTGCTGACATG +
Preference number: 5 (lower is better)
Translates to: LASLLPDRFLSLGPSLESCSCQK*SCFADM
Trigger: CATGTCAGCAAAACAAGACAATTTTTGGCAAGAACA...AGACTCTAGAGAGGGTCCCAGTGACAAAAATCTATCAGGGAGAAGGCTGGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CAA 90 bp GATCTTATGCGCCTACAGAAAGTTCTTAGAGCTCAAAACAACATCTTACAGGTTGGCCAAGGCCACACATaGTGTAAGTGGGTGAAATGG +
Preference number: 5 (lower is better)
Translates to: DLMRLQKVLRAQNNILQVGQGHT*CKWVKW
Trigger: CCATTTCACCCACTTACACAATGTGTGGCCTTGGCC...AACCTGTAAGATGTTGTTTTGAGCTCTAAGAACTTTCTGTAGGCGCATAAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CAA 90 bp GTTGATCTGAAAGCCCAGAGAAGCTTCCTGTTCCTTCAACAGTCTTTGGGGTCAATGACCTTTTACATCTaGTACACACTTAACCGACCT +
Preference number: 5 (lower is better)
Translates to: VDLKAQRSFLFLQQSLGSMTFYI*YTLNRP
Trigger: AGGTCGGTTAAGTGTGTACAAGATGTAAAAGGTCAT...TGACCCCAAAGACTGTTGAAGGAACAGGAAGCTTCTCTGGGCTTTCAGATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CAA 90 bp GATCTTATGCGCCTACAGAAAGTTCTTAGAGCTCAAAACAACATCTTACAGGTTCAGGGCATCAAAGGATaGCCCTTTCCAAAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: DLMRLQKVLRAQNNILQVQGIKG*PFPKPF
Trigger: GAAGGGCTTTGGAAAGGGCAATCCTTTGATGCCCTG...AACCTGTAAGATGTTGTTTTGAGCTCTAAGAACTTTCTGTAGGCGCATAAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CAA 90 bp TGTACACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCAGGGGTTGCCCTTCTATaGATCCAAATCCTGAGTGTC +
Preference number: 5 (lower is better)
Translates to: CTHLTDLLFTILGPKFYPGVALL*IQILSV
Trigger: GACACTCAGGATTTGGATCAATAGAAGGGCAACCCC...TGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS-3UTR CAA 90 bp TGTTTTACCCTTCCCTTTACCTATCCTGCTCCCACTAGTAACAGTGCAATAGGCGCTAAGATTTTAAGATaGGTTCATGTACCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: CFTLPFTYPAPTSNSAIGAKILR*VHVPSA
Trigger: GGCAGAAGGTACATGAACCAATCTTAAAATCTTAGC...GCCTATTGCACTGTTACTAGTGGGAGCAGGATAGGTAAAGGGAAGGGTAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS-3UTR CAA 90 bp ACACACTTAACCGACCTCTTGTTTACCATTTTAGGGCCAAAATTCTATCCAGGACACTTAACCGACCTCTaGTTTACCATTTTAGGGCCA +
Preference number: 5 (lower is better)
Translates to: THLTDLLFTILGPKFYPGHLTDL*FTILGP
Trigger: TGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTG...TCCTGGATAGAATTTTGGCCCTAAAATGGTAAACAAGAGGTCGGTTAAGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS TCA 72 bp CCACCAGCGCACCCAGCCATGCCTCGTGACCCAGGCTaGCCAGGGCACTGCCTGCTGTGGCCCCTCGCCAGC +
Preference number: 6 (lower is better)
Translates to: PPAHPAMPRDPG*PGHCLLWPLAS
Trigger: GCTGGCGAGGGGCCACAGCAGGCAGTGCCCTGGTCAGCCTGGGTCACGAGGCATGGCTGGGTGCGCTGGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS GCA 72 bp GGGGGCATGTGGCTCACCCACCAGCGCACCCAGCCATaGCTCGTGACCCAGGCTGACCAGGGCACTGCCTGC +
Preference number: 6 (lower is better)
Translates to: GGMWLTHQRTQP*LVTQADQGTAC
Trigger: GCAGGCAGTGCCCTGGTCAGCCTGGGTCACGAGGCATGGCTGGGTGCGCTGGTGGGTGAGCCACATGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS CCA 72 bp GCACTGAGCACCAGCAGCAGGAGAGCCGGTAGCAGGTaGCGCCACACCGCGGCCACGACAGGCCACAAGGAG +
Preference number: 6 (lower is better)
Translates to: ALSTSSRRAGSR*RHTAATTGHKE
Trigger: CTCCTTGTGGCCTGTCGTGGCCGCGGTGTGGCGCCACCTGCTACCGGCTCTCCTGCTGCTGGTGCTCAGTGC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS GCA 72 bp ACAGCAGGCGCTGCAGCGGTTGCCGCCAGTTCGAGGTaGTCCACCACTGGATCCAGCTCGGGGGCATGTGGC +
Preference number: 6 (lower is better)
Translates to: TAGAAAVAASSR*STTGSSSGACG
Trigger: GCCACATGCCCCCGAGCTGGATCCAGTGGTGGAGCACCTCGAACTGGCGGCAACCGCTGCAGCGCCTGCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS GCA 72 bp ATCCCCTCCAGACCCCACAGCAGGCGCTGCAGCGGTTaGCGCCAGTTCGAGGTGCTCCACCACTGGATCCAG +
Preference number: 6 (lower is better)
Translates to: IPSRPHSRRCSG*RQFEVLHHWIQ
Trigger: CTGGATCCAGTGGTGGAGCACCTCGAACTGGCGGCAACCGCTGCAGCGCCTGCTGTGGGGTCTGGAGGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS CCA 72 bp TGCAGCGGTTGCCGCCAGTTCGAGGTGCTCCACCACTaGATCCAGCTCGGGGGCATGTGGCTCACCCACCAG +
Preference number: 6 (lower is better)
Translates to: CSGCRQFEVLHH*IQLGGMWLTHQ
Trigger: CTGGTGGGTGAGCCACATGCCCCCGAGCTGGATCCAGTGGTGGAGCACCTCGAACTGGCGGCAACCGCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS GCA 72 bp CCAGCCCCGATGGTATCTGTCTCCACTCGCGGCTGCTaGATCATGTCTGGTGCACCTGGGGAGAGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: PAPMVSVSTRGC*IMSGAPGERAR
Trigger: CCTGGCCCTCTCCCCAGGTGCACCAGACATGATGCAGCAGCCGCGAGTGGAGACAGATACCATCGGGGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS GCA 72 bp TCGCCAGCCCCGATGGTATCTGTCTCCACTCGCGGCTaGTGCATCATGTCTGGTGCACCTCTGGGCAGTTAC +
Preference number: 6 (lower is better)
Translates to: SPAPMVSVSTRG*CIMSGAPLGSY
Trigger: GTAACTGCCCAGAGGTGCACCAGACATGATGCAGCAGCCGCGAGTGGAGACAGATACCATCGGGGCTGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380585.2
CDS CCA 72 bp GGTATCTGTCTCCACTCGCGGCTGCTGCATCATGTCTaGTGCACCTGGGGAGAGGGCCAGGGTCTTGAAGAT +
Preference number: 6 (lower is better)
Translates to: GICLHSRLLHHV*CTWGEGQGLED
Trigger: ATCTTCAAGACCCTGGCCCTCTCCCCAGGTGCACCAGACATGATGCAGCAGCCGCGAGTGGAGACAGATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361033.1
CDS GCA 72 bp GGAGCCAGTGGTGAAGAGTGCATGGCACAACATCAGTaGCAGCAGCAGGTAGAGTATCCCCTCCAGACCCCA +
Preference number: 6 (lower is better)
Translates to: GASGEECMAQHQ*QQQVEYPLQTP
Trigger: TGGGGTCTGGAGGGGATACTCTACCTGCTGCTGGCACTGATGTTGTGCCATGCACTCTTCACCACTGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS CAA 90 bp CCAGGGCTCAACAGACACAGGCAGTGGGATGGGGTTGCCCTTCTATaGATCCAAATCCTGAGTGTCGCCTGGGTGAGTCATGGAGGTGAG +
Preference number: 6 (lower is better)
Translates to: PGLNRHRQWDGVALL*IQILSVAWVSHGGE
Trigger: CTCACCTCCATGACTCACCCAGGCGACACTCAGGATTTGGATCAATAGAAGGGCAACCCCATCCCACTGCCTGTGTCTGTTGAGCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS GCA 72 bp GCCAGGGCTCAACAGACACAGGCAGTGGGATGGGGTTaGCCTTCTATTGATCCAAATCCTGAGTGTCGCCTG +
Preference number: 6 (lower is better)
Translates to: ARAQQTQAVGWG*PSIDPNPECRL
Trigger: CAGGCGACACTCAGGATTTGGATCAATAGAAGGGCAACCCCATCCCACTGCCTGTGTCTGTTGAGCCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS CCA 72 bp GTTGCCCTTCTATTGATCCAAATCCTGAGTGTCGCCTaGGTGAGTCATGGAGGTGAGGAGGCCCACAAGGCT +
Preference number: 6 (lower is better)
Translates to: VALLLIQILSVA*VSHGGEEAHKA
Trigger: AGCCTTGTGGGCCTCCTCACCTCCATGACTCACCCAGGCGACACTCAGGATTTGGATCAATAGAAGGGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2
CDS CAA 72 bp AACAGACACAGGCAGTGGGATGGGGTTGCCCTTCTATaGATCCAAATCCTGAGTGTCGCCTGGGTGAGTCAT +
Preference number: 6 (lower is better)
Translates to: NRHRQWDGVALL*IQILSVAWVSH
Trigger: ATGACTCACCCAGGCGACACTCAGGATTTGGATCAATAGAAGGGCAACCCCATCCCACTGCCTGTGTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361033.1
ENST00000380585.2