Pregenerated sensors for TMEM238 (Homo sapiens)
Ensembl gene IDs: ENSG00000233493Ensembl transcript IDs: ENST00000444469.4
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GGAGGGAGGGGGTACAGGGAGCGTCCGTCTGGCCACGGATGTAGGGGCAGCTGCTCGCGGCCGCGCACCTaGAGCTGCGCGAACACGCCG | + |
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Preference number: 4 (lower is better) Translates to: GGRGYRERPSGHGCRGSCSRPRT*SCANTP Trigger: CGGCGTGTTCGCGCAGCTGCAGGTGCGCGGCCGCGA...GCAGCTGCCCCTACATCCGTGGCCAGACGGACGCTCCCTGTACCCCCTCCCTCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000444469.4 |
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| CDS-3UTR GCA 90 bp | GGAGGGAGGGGGTACAGGGAGCGTCCGTCTGGCCACGGATGTAGGGGCAGCTGCCCGCGCACCTGCAGCTaGGCGAACACGCCGGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: GGRGYRERPSGHGCRGSCPRTCS*ANTPVS Trigger: GCTGACCGGCGTGTTCGCGCAGCTGCAGGTGCGCGG...GCAGCTGCCCCTACATCCGTGGCCAGACGGACGCTCCCTGTACCCCCTCCCTCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000444469.4 |
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| CDS-3UTR GCA 90 bp | GGAGGGGGTACAGGGAGCGTCCGTCTGGCCACGGATGTAGGGGCAGCTGCACATTCAGCAGCGCCGCCATaGCCGCCACATCCAGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: GGGTGSVRLATDVGAAAHSAAPP*PPHPAP Trigger: TGGCGCTGGATGTGGCGGGCATGGCGGCGCTGCTGA...ATGTGCAGCTGCCCCTACATCCGTGGCCAGACGGACGCTCCCTGTACCCCCTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000444469.4 |
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| CDS-3UTR TCA 90 bp | GGGAGCGTCCGTCTGGCCACGGATGTAGGGGCAGCTGCACATCTCAGTCTGGTCGCGCGCCCGAGTAGATaGGCAGGTCCCCGAAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: GSVRLATDVGAAAHLSLVARPSR*AGPRSR Trigger: GCGACTTCGGGGACCTGCTCATCTACTCGGGCGCGC...GACCAGACTGAGATGTGCAGCTGCCCCTACATCCGTGGCCAGACGGACGCTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444469.4 |
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| CDS-3UTR CCA 90 bp | GGAGGGGGTACAGGGAGCGTCCGTCTGGCCACGGATGTAGGGGCAGCTGCACATTCGCGCTCCAGCTCCTaGCGCGAGATCTCGATGTTG | + |
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Preference number: 4 (lower is better) Translates to: GGGTGSVRLATDVGAAAHSRSSS*REISML Trigger: CAACATCGAGATCTCGCGCCAGGAGCTGGAGCGCGA...ATGTGCAGCTGCCCCTACATCCGTGGCCAGACGGACGCTCCCTGTACCCCCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000444469.4 |
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| CDS-3UTR CCA 90 bp | GAGGGAGGGGGTACAGGGAGCGTCCGTCTGGCCACGGATGTAGGGGCAGCTGCATCTGGTCCTGACAGCTaGAGCCAAGGGGTTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EGGGTGSVRLATDVGAAASGPDS*SQGVVW Trigger: CCAGACAACCCCTTGGCTCCAGCTGTCAGGACCAGA...TGCAGCTGCCCCTACATCCGTGGCCAGACGGACGCTCCCTGTACCCCCTCCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000444469.4 |
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| CDS-3UTR TCA 90 bp | GGGTACAGGGAGCGTCCGTCTGGCCACGGATGTAGGGGCAGCTGCACATCTCAGATCTCAGTCTGGTCCTaGCAGCTGGAGCCAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GYRERPSGHGCRGSCTSQISVWS*QLEPRG Trigger: ACCCCTTGGCTCCAGCTGTCAGGACCAGACTGAGAT...CTGAGATGTGCAGCTGCCCCTACATCCGTGGCCAGACGGACGCTCCCTGTACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444469.4 |
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| CDS-3UTR GCA 90 bp | GGGGGTACAGGGAGCGTCCGTCTGGCCACGGATGTAGGGGCAGCTGCACATCTCGCGAGATCTCGATGTTaGCGGTGTACCAGAGGATCC | + |
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Preference number: 4 (lower is better) Translates to: GGTGSVRLATDVGAAAHLARSRC*RCTRGS Trigger: GGATCCTCTGGTACACCGGCAACATCGAGATCTCGC...GAGATGTGCAGCTGCCCCTACATCCGTGGCCAGACGGACGCTCCCTGTACCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000444469.4 |
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| CDS-3UTR GCA 90 bp | GGAGGGGGTACAGGGAGCGTCCGTCTGGCCACGGATGTAGGGGCAGCTGCACATGGATGTAGGGGCAGCTaGACATCTCAGTCTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGGTGSVRLATDVGAAAHGCRGS*TSQSGP Trigger: AGGACCAGACTGAGATGTGCAGCTGCCCCTACATCC...ATGTGCAGCTGCCCCTACATCCGTGGCCAGACGGACGCTCCCTGTACCCCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000444469.4 |
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| CDS-3UTR TCA 90 bp | CGTCCGTCTGGCCACGGATGTAGGGGCAGCTGCACATCTCAGTCTGGTCCTGACTGCTTTTTATCCAAGTaGGGAGGGAGGGGGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RPSGHGCRGSCTSQSGPDCFLSK*GGRGYR Trigger: CCTGTACCCCCTCCCTCCTCACTTGGATAAAAAGCA...GTCAGGACCAGACTGAGATGTGCAGCTGCCCCTACATCCGTGGCCAGACGGACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000444469.4 |
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| CDS TCA 90 bp | TCCAGCCCAGCAGGCTCAGGAACACCAGCAGCGCGCCCGAGTAGATaGGCAGGTCCCCGAAGTCGCGGCCGCGCACCTGCAGCTGCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSPAGSGTPAARPSR*AGPRSRGRAPAAAR Trigger: TCGCGCAGCTGCAGGTGCGCGGCCGCGACTTCGGGGACCTGCTCATCTACTCGGGCGCGCTGCTGGTGTTCCTGAGCCTGCTGGGCTGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444469.4 |
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| CDS CCA 90 bp | CACGGATGTAGGGGCAGCTGCACATCTCAGTCTGGTCCTGACAGCTaGAGCCAAGGGGTTGTCTGGGCCTCACTCGCTGCCCGCGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: HGCRGSCTSQSGPDS*SQGVVWASLAARAR Trigger: GCGGGCGCGGGCAGCGAGTGAGGCCCAGACAACCCCTTGGCTCCAGCTGTCAGGACCAGACTGAGATGTGCAGCTGCCCCTACATCCGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444469.4 |
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| CDS GCA 90 bp | GCAGGCCGTAGTCGCGCTCCAGCTCCTGGCGCGAGATCTCGATGTTaGCGGTGTACCAGAGGATCCAGCCCAGCAGGCTCAGGAACACCA | + |
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Preference number: 5 (lower is better) Translates to: AGRSRAPAPGARSRC*RCTRGSSPAGSGTP Trigger: TGGTGTTCCTGAGCCTGCTGGGCTGGATCCTCTGGTACACCGGCAACATCGAGATCTCGCGCCAGGAGCTGGAGCGCGACTACGGCCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444469.4 |
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| CDS-3UTR CAA 90 bp | GAGGGAGGGGGTACAGGGAGCGTCCGTCTGGCCACGGATGTAGGGGCAGCTGCACGCGAGATCTCGATGTaGCCGGTGTACCAGAGGATC | + |
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Preference number: 5 (lower is better) Translates to: EGGGTGSVRLATDVGAAAREISM*PVYQRI Trigger: GATCCTCTGGTACACCGGCAACATCGAGATCTCGCG...TGCAGCTGCCCCTACATCCGTGGCCAGACGGACGCTCCCTGTACCCCCTCCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000444469.4 |
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| CDS-3UTR CAA 90 bp | TACAGGGAGCGTCCGTCTGGCCACGGATGTAGGGGCAGCTGCACATCTCAGTCTGCTGGAGCCAAGGGGTaGTCTGGGCCTCACTCGCTG | + |
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Preference number: 5 (lower is better) Translates to: YRERPSGHGCRGSCTSQSAGAKG*SGPHSL Trigger: CAGCGAGTGAGGCCCAGACAACCCCTTGGCTCCAGC...AGACTGAGATGTGCAGCTGCCCCTACATCCGTGGCCAGACGGACGCTCCCTGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444469.4 |
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| CDS GCA 72 bp | AGCAGGTCCCCGAAGTCGCGGCCGCGCACCTGCAGCTaGGCGAACACGCCGGTCAGCAGCGCCGCCATGCCC | + |
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Preference number: 6 (lower is better) Translates to: SRSPKSRPRTCS*ANTPVSSAAMP Trigger: GGGCATGGCGGCGCTGCTGACCGGCGTGTTCGCGCAGCTGCAGGTGCGCGGCCGCGACTTCGGGGACCTGCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444469.4 |
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| CDS CCA 72 bp | CAGTCTGGTCCTGACAGCTGGAGCCAAGGGGTTGTCTaGGCCTCACTCGCTGCCCGCGCCCGCCGCCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: QSGPDSWSQGVV*ASLAARARRPG Trigger: CCCGGGGCGGCGGGCGCGGGCAGCGAGTGAGGCCCAGACAACCCCTTGGCTCCAGCTGTCAGGACCAGACTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444469.4 |
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| CDS TCA 72 bp | GCAGGCTCAGGAACACCAGCAGCGCGCCCGAGTAGATaGGCAGGTCCCCGAAGTCGCGGCCGCGCACCTGCA | + |
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Preference number: 6 (lower is better) Translates to: AGSGTPAARPSR*AGPRSRGRAPA Trigger: TGCAGGTGCGCGGCCGCGACTTCGGGGACCTGCTCATCTACTCGGGCGCGCTGCTGGTGTTCCTGAGCCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444469.4 |
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| CDS CAA 72 bp | CATCTCAGTCTGGTCCTGACAGCTGGAGCCAAGGGGTaGTCTGGGCCTCACTCGCTGCCCGCGCCCGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: HLSLVLTAGAKG*SGPHSLPAPAA Trigger: GGCGGCGGGCGCGGGCAGCGAGTGAGGCCCAGACAACCCCTTGGCTCCAGCTGTCAGGACCAGACTGAGATG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444469.4 |
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| CDS GCA 72 bp | AGTCGCGCTCCAGCTCCTGGCGCGAGATCTCGATGTTaGCGGTGTACCAGAGGATCCAGCCCAGCAGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SRAPAPGARSRC*RCTRGSSPAGS Trigger: TGAGCCTGCTGGGCTGGATCCTCTGGTACACCGGCAACATCGAGATCTCGCGCCAGGAGCTGGAGCGCGACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444469.4 |
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