RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM237 (Homo sapiens)

Ensembl gene IDs: ENSG00000155755

Ensembl transcript IDs: ENST00000286196.9, ENST00000409444.6, ENST00000409883.7, ENST00000432684.6, ENST00000444047.6, ENST00000463205.2, ENST00000466839.5, ENST00000471318.5, ENST00000480124.1, ENST00000489550.5, ENST00000495329.1, ENST00000621467.4

Found 614 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAAATCCATTTCCTTGCTCATTGTTGGCCAAGGGCCGTACTCAGCTaGAAGGTCATCACTCTCCTTGGCTCATGGCCCCCTCTTCCATCT +
Preference number: 1 (lower is better)
Translates to: EIHFLAHCWPRAVLS*KVITLLGSWPPLPS
Trigger: AGATGGAAGAGGGGGCCATGAGCCAAGGAGAGTGATGACCTTGCAGCTGAGTACGGCCCTTGGCCAACAATGAGCAAGGAAATGGATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR GCA 90 bp CAAAAGATAGAGTTCTTTAGGGGCAGGAACCTGCACCTCACCTTGTaGTCCTCAGAGTACATGGCCCAATATCCCAAGGCCCTTAACACA +
Preference number: 1 (lower is better)
Translates to: QKIEFFRGRNLHLTL*SSEYMAQYPKALNT
Trigger: TGTGTTAAGGGCCTTGGGATATTGGGCCATGTACTCTGAGGAGCACAAGGTGAGGTGCAGGTTCCTGCCCCTAAAGAACTCTATCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CCA 90 bp TGGTCCAGGAAGGCTTCACGTCCATTGACACATCTATGTTTTCTGTaGTCTTTATCAACTCTGAACGATCAGCAGCCTGGAATCTCCGGC +
Preference number: 1 (lower is better)
Translates to: WSRKASRPLTHLCFL*SLSTLNDQQPGISG
Trigger: GCCGGAGATTCCAGGCTGCTGATCGTTCAGAGTTGATAAAGACCACAGAAAACATAGATGTGTCAATGGACGTGAAGCCTTCCTGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
3UTR CCA 90 bp AGAGATCTTTCCCAGTGCAGGACCCATCTCAAGAGGGGGATTTCCTaGAAAACCAGAAACCTCTCTGACAAAGAGCTGGAGAACAGAGAT +
Preference number: 1 (lower is better)
Translates to: RDLSQCRTHLKRGIS*KTRNLSDKELENRD
Trigger: ATCTCTGTTCTCCAGCTCTTTGTCAGAGAGGTTTCTGGTTTTCCAGGAAATCCCCCTCTTGAGATGGGTCCTGCACTGGGAAAGATCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CCA 90 bp TTAGGGGCAGGAACCTGCACCTCACCTTGTGCTCCTCAGAGTACATaGCCCAATATCCCAAGGCCCTTAACACATTTGTCATTATTTCAG +
Preference number: 1 (lower is better)
Translates to: LGAGTCTSPCAPQST*PNIPRPLTHLSLFQ
Trigger: CTGAAATAATGACAAATGTGTTAAGGGCCTTGGGATATTGGGCCATGTACTCTGAGGAGCACAAGGTGAGGTGCAGGTTCCTGCCCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR TCA 90 bp ATACTGCCAGCTTATTGCCAGATTGAGAACCATTGCTGGTCACAGTaGAAGCTGGAACTAGCAGGATGCCTTCAGAATTGCCAGCAAATT +
Preference number: 1 (lower is better)
Translates to: ILPAYCQIENHCWSQ*KLELAGCLQNCQQI
Trigger: AATTTGCTGGCAATTCTGAAGGCATCCTGCTAGTTCCAGCTTTCACTGTGACCAGCAATGGTTCTCAATCTGGCAATAAGCTGGCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR GCA 90 bp TTTTTCCACAAATACTTTGCCTACAGGCTGGCTAATGCCAGTGGGTaGAGTGAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGT +
Preference number: 1 (lower is better)
Translates to: FFHKYFAYRLANASG*SEYRLLFHSSLLIS
Trigger: ACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCCTGTAGGCAAAGTATTTGTGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
3UTR CCA 90 bp ACATACACTTGCTATCTTACAGTTCTGTATGTCAAAAGTATGACATaGGCAGCACCAGGCCAAAACCAAGGTATCCACAGAGCTGCCTTC +
Preference number: 1 (lower is better)
Translates to: TYTCYLTVLYVKSMT*AAPGQNQGIHRAAF
Trigger: GAAGGCAGCTCTGTGGATACCTTGGTTTTGGCCTGGTGCTGCCCATGTCATACTTTTGACATACAGAACTGTAAGATAGCAAGTGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR TCA 90 bp TCATTTGGGATACTCATAGAACTCAGTTCCTTGTGGTTATGTGACTaGAATCCATTTCCTTGCTCATTGTTGGCCAAGGGCCGTACTCAG +
Preference number: 1 (lower is better)
Translates to: SFGILIELSSLWLCD*NPFPCSLLAKGRTQ
Trigger: CTGAGTACGGCCCTTGGCCAACAATGAGCAAGGAAATGGATTTCAGTCACATAACCACAAGGAACTGAGTTCTATGAGTATCCCAAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR GCA 90 bp ATGCCAGTGGGTGCAGTGAATACAGACTGCTGTTCCACAGTAGTTTaGTCATCAGTGATTATGTCTTCATCTTCTACTCCTAGCTCATTG +
Preference number: 1 (lower is better)
Translates to: MPVGAVNTDCCSTVV*SSVIMSSSSTPSSL
Trigger: CAATGAGCTAGGAGTAGAAGATGAAGACATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTCACTGCACCCACTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
3UTR CCA 90 bp GAATTATCCTTGGCTACAAGGATCAATAACAAGGATGTTGCCAGTTaGACATTGGACAGGGAGTTGCTGGGCAAATGTCCTCATAGAAGT +
Preference number: 1 (lower is better)
Translates to: ELSLATRINNKDVAS*TLDRELLGKCPHRS
Trigger: ACTTCTATGAGGACATTTGCCCAGCAACTCCCTGTCCAATGTCCAACTGGCAACATCCTTGTTATTGATCCTTGTAGCCAAGGATAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CCA 90 bp AAAGCTGAAATTGTACTCAGAGCCAAAAGCAAGTACAGAAGACTCTaGAATGGATACGCTAGGGTCTTGTATTGTTGCAGAAGGTTTGAG +
Preference number: 1 (lower is better)
Translates to: KAEIVLRAKSKYRRL*NGYARVLYCCRRFE
Trigger: CTCAAACCTTCTGCAACAATACAAGACCCTAGCGTATCCATTCCAGAGTCTTCTGTACTTGCTTTTGGCTCTGAGTACAATTTCAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286196.9
3UTR CCA 90 bp ACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTACTTCTTaGCATATCCTTGTCAGCCTAAATAACAGAGAGGGAGACTCTCTG +
Preference number: 1 (lower is better)
Translates to: TYPKGRVNCYIQATS*HILVSLNNREGDSL
Trigger: CAGAGAGTCTCCCTCTCTGTTATTTAGGCTGACAAGGATATGCCAAGAAGTAGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR GCA 90 bp AGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTaGTGTCCAGCAGCTCACTCTGTTCTTAGGGTTCATGTTATGCAA +
Preference number: 1 (lower is better)
Translates to: RFILCGVLITAPHET*CPAAHSVLRVHVMQ
Trigger: TTGCATAACATGAACCCTAAGAACAGAGTGAGCTGCTGGACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CCA 90 bp ATGGATACGCTAGGGTCTTGTATTGTTGCAGAAGGTTTGAGAGGTTaGATAGCTGATCTCCTGCTAGAACATATATCACAACAATATTCC +
Preference number: 1 (lower is better)
Translates to: MDTLGSCIVAEGLRG*IADLLLEHISQQYS
Trigger: GGAATATTGTTGTGATATATGTTCTAGCAGGAGATCAGCTATCCAACCTCTCAAACCTTCTGCAACAATACAAGACCCTAGCGTATCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286196.9
3UTR CCA 90 bp CCCCGTTTTAAGGTTCATAACCTTAATCATATCTGCAAATCCCTTTaGCCAAGTAAAGTAGTATATTCACAAGTTCCAGGGATTAGGACA +
Preference number: 1 (lower is better)
Translates to: PRFKVHNLNHICKSL*PSKVVYSQVPGIRT
Trigger: TGTCCTAATCCCTGGAACTTGTGAATATACTACTTTACTTGGCCAAAGGGATTTGCAGATATGATTAAGGTTATGAACCTTAAAACGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR GCA 90 bp TTAACTCTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTaGTATATCCAAGCTACTTCTTGGCATATCCTTGTCAGCCTAAAT +
Preference number: 1 (lower is better)
Translates to: LTLISPYTYPKGRVN*YIQATSWHILVSLN
Trigger: ATTTAGGCTGACAAGGATATGCCAAGAAGTAGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAGAGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp GCCTACAGGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGACTGCTGTTCCACACTTTGCCTACAGGCTaGCTAATGCCAGTGGGTGCA +
Preference number: 2 (lower is better)
Translates to: AYRLANASGCSEYRLLFHTLPTG*LMPVGA
Trigger: TGCACCCACTGGCATTAGCCAGCCTGTAGGCAAAGT...GTGGAACAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCCTGTAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
3UTR-3UTR TCA 90 bp CTGAAAGCCCGGTGCACTGTAAGTGCCACATCTCTGGTGGTCCAGGAAGGCTTCGGTCTTTATCAACTCTaGACGATCAGCAGCCTGGAA +
Preference number: 2 (lower is better)
Translates to: LKARCTVSATSLVVQEGFGLYQL*TISSLE
Trigger: TTCCAGGCTGCTGATCGTTCAGAGTTGATAAAGACC...GAAGCCTTCCTGGACCACCAGAGATGTGGCACTTACAGTGCACCGGGCTTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
3UTR-3UTR TCA 90 bp ACTTGTACAGGGCCACTAGCTGCTCAGGTTTATATGCCTCCTGGGTCATTACGATCTCCTTTATTCCCCTaGGCCTTGCCCTGCTCAGCC +
Preference number: 2 (lower is better)
Translates to: TCTGPLAAQVYMPPGSLRSPLFP*ALPCSA
Trigger: GGCTGAGCAGGGCAAGGCTCAGGGGAATAAAGGAGA...TCGTAATGACCCAGGAGGCATATAAACCTGAGCAGCTAGTGGCCCTGTACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp CTGGTGGTCCAGGAAGGCTTCACGTCCATTGACACATCTATGTTTTCTGTGGTCGTGCCACATCTCTGGTaGTCCAGGAAGGCTTCACGT +
Preference number: 2 (lower is better)
Translates to: LVVQEGFTSIDTSMFSVVVPHLW*SRKASR
Trigger: ACGTGAAGCCTTCCTGGACCACCAGAGATGTGGCAC...GACCACAGAAAACATAGATGTGTCAATGGACGTGAAGCCTTCCTGGACCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
3UTR-3UTR TCA 90 bp GAACTCCTATACTGCCAGCTTATTGCCAGATTGAGAACCATTGCTGGTCACAGTTCTCCTTTATTCCCCTaGGCCTTGCCCTGCTCAGCC +
Preference number: 2 (lower is better)
Translates to: ELLYCQLIARLRTIAGHSSPLFP*ALPCSA
Trigger: GGCTGAGCAGGGCAAGGCTCAGGGGAATAAAGGAGA...ACTGTGACCAGCAATGGTTCTCAATCTGGCAATAAGCTGGCAGTATAGGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp GCCTACAGGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGACTGCTGTTCCACGCAGTGAATACAGACTaGTGTTCCACAGTAGTTTGC +
Preference number: 2 (lower is better)
Translates to: AYRLANASGCSEYRLLFHAVNTD*CSTVVC
Trigger: GCAAACTACTGTGGAACAGCAGTCTGTATTCACTGC...GTGGAACAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCCTGTAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
3UTR-3UTR GCA 90 bp TACTTTGCCTACAGGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGACTGCTGATCCTGAAAGCCCGGTaGACTGTAAGTGCCACATCT +
Preference number: 2 (lower is better)
Translates to: YFAYRLANASGCSEYRLLILKAR*TVSATS
Trigger: AGATGTGGCACTTACAGTGCACCGGGCTTTCAGGAT...CAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCCTGTAGGCAAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
3UTR-3UTR GCA 90 bp TACAGGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGACTGCTGTTCCACAGTAGGTTTTTGAATAACTaGCTCCTCAGCTGGCTCCGC +
Preference number: 2 (lower is better)
Translates to: YRLANASGCSEYRLLFHSRFLNN*LLSWLR
Trigger: GCGGAGCCAGCTGAGGAGGCAGTTATTCAAAAACCT...ACTGTGGAACAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
3UTR CAA 90 bp TCTCAAAAGATAGAGTTCTTTAGGGGCAGGAACCTGCACCTCACCTaGTGCTCCTCAGAGTACATGGCCCAATATCCCAAGGCCCTTAAC +
Preference number: 2 (lower is better)
Translates to: SQKIEFFRGRNLHLT*CSSEYMAQYPKALN
Trigger: GTTAAGGGCCTTGGGATATTGGGCCATGTACTCTGAGGAGCACAAGGTGAGGTGCAGGTTCCTGCCCCTAAAGAACTCTATCTTTTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR TCA 90 bp ACTTGTACAGGGCCACTAGCTGCTCAGGTTTATATGCCTCCTGGGTCATTACGACATTGCTGGTCACAGTaGAAGCTGGAACTAGCAGGA +
Preference number: 2 (lower is better)
Translates to: TCTGPLAAQVYMPPGSLRHCWSQ*KLELAG
Trigger: TCCTGCTAGTTCCAGCTTTCACTGTGACCAGCAATG...TCGTAATGACCCAGGAGGCATATAAACCTGAGCAGCTAGTGGCCCTGTACAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp AGTGCCACATCTCTGGTGGTCCAGGAAGGCTTCACGTCCATTGACACATCTATGGCAGTGAATACAGACTaGTGTTCCACAGTAGTTTGC +
Preference number: 2 (lower is better)
Translates to: SATSLVVQEGFTSIDTSMAVNTD*CSTVVC
Trigger: GCAAACTACTGTGGAACAGCAGTCTGTATTCACTGC...CATAGATGTGTCAATGGACGTGAAGCCTTCCTGGACCACCAGAGATGTGGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
3UTR-3UTR GCA 90 bp GTACTTCCCAGACCTGGAAGAATACAAAGGCAACTATGCCCATGGCAGTTACATTATTCCCCTGAGCCTTaGCCTGCTCAGCCTCTTTTG +
Preference number: 2 (lower is better)
Translates to: VLPRPGRIQRQLCPWQLHYSPEP*PAQPLL
Trigger: CAAAAGAGGCTGAGCAGGGCAAGGCTCAGGGGAATA...ATGTAACTGCCATGGGCATAGTTGCCTTTGTATTCTTCCAGGTCTGGGAAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp GCCTACAGGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGACTGCTGTTCCACATGACTTCTTTTGGGTaGAGGAAGTCTCCAATTCTT +
Preference number: 2 (lower is better)
Translates to: AYRLANASGCSEYRLLFHMTSFG*RKSPIL
Trigger: AAGAATTGGAGACTTCCTCCACCCAAAAGAAGTCAT...GTGGAACAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCCTGTAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432684.6
3UTR-3UTR TCA 90 bp CTCTGGTGGTCCAGGAAGGCTTCACGTCCATTGACACATCTATGTTTTCTGTGGGAGAGGTTGGATAGCTaGTCTCCTGCTAGAACATAT +
Preference number: 2 (lower is better)
Translates to: LWWSRKASRPLTHLCFLWERLDS*SPARTY
Trigger: ATATGTTCTAGCAGGAGATCAGCTATCCAACCTCTC...CCACAGAAAACATAGATGTGTCAATGGACGTGAAGCCTTCCTGGACCACCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
3UTR-3UTR GCA 90 bp CGGTGCACTGTAAGTGCCACATCTCTGGTGGTCCAGGAAGGCTTCACGTCCATTTGTTCCACAGTAGTTTaGTCATCAGTGATTATGTCT +
Preference number: 2 (lower is better)
Translates to: RCTVSATSLVVQEGFTSICSTVV*SSVIMS
Trigger: AGACATAATCACTGATGAGCAAACTACTGTGGAACA...AATGGACGTGAAGCCTTCCTGGACCACCAGAGATGTGGCACTTACAGTGCACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
3UTR-3UTR GCA 90 bp ATTCCACACAGCACAGCCAGCCAAGAATCCATGAGAAAAGAGACCAATCATCCTAGGTTTTTGAATAACTaGCTCCTCAGCTGGCTCCGC +
Preference number: 2 (lower is better)
Translates to: IPHSTASQESMRKETNHPRFLNN*LLSWLR
Trigger: GCGGAGCCAGCTGAGGAGGCAGTTATTCAAAAACCT...AGGATGATTGGTCTCTTTTCTCATGGATTCTTGGCTGGCTGTGCTGTGTGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432684.6
3UTR-3UTR CCA 90 bp AGGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGACTGCTGTTCCACAGTAGTCTAGATGACTTCTTTTaGGTGGAGGAAGTCTCCAAT +
Preference number: 2 (lower is better)
Translates to: RLANASGCSEYRLLFHSSLDDFF*VEEVSN
Trigger: ATTGGAGACTTCCTCCACCCAAAAGAAGTCATCTAG...ACTACTGTGGAACAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
3UTR-3UTR CCA 90 bp ATTCCACACAGCACAGCCAGCCAAGAATCCATGAGAAAAGAGACCAATCATCCTAACTGCCTCCTCAGCTaGCTCCGCATCAATACCATT +
Preference number: 2 (lower is better)
Translates to: IPHSTASQESMRKETNHPNCLLS*LRINTI
Trigger: AATGGTATTGATGCGGAGCCAGCTGAGGAGGCAGTT...AGGATGATTGGTCTCTTTTCTCATGGATTCTTGGCTGGCTGTGCTGTGTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432684.6
3UTR CAA 90 bp TTGCTGGTCACAGTGAAAGCTGGAACTAGCAGGATGCCTTCAGAATaGCCAGCAAATTCACAATTCTGTGACAGCAGGGAGAATCCCTTT +
Preference number: 2 (lower is better)
Translates to: LLVTVKAGTSRMPSE*PANSQFCDSRENPF
Trigger: AAAGGGATTCTCCCTGCTGTCACAGAATTGTGAATTTGCTGGCAATTCTGAAGGCATCCTGCTAGTTCCAGCTTTCACTGTGACCAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CAA 90 bp AGGTATCCACAGAGCTGCCTTCCTTTCTTGGCTCTAGGGGAGGATTaGTTTCCTTGCTCATTTGGGATACTCATAGAACTCAGTTCCTTG +
Preference number: 2 (lower is better)
Translates to: RYPQSCLPFLALGED*FPCSFGILIELSSL
Trigger: CAAGGAACTGAGTTCTATGAGTATCCCAAATGAGCAAGGAAACAAATCCTCCCCTAGAGCCAAGAAAGGAAGGCAGCTCTGTGGATACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR TCA 90 bp AGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTCCCAAGCATTGCTGGTCACAGTaGAAGCTGGAACTAGCAGGA +
Preference number: 2 (lower is better)
Translates to: RQLCPWQLHIINVASFPKHCWSQ*KLELAG
Trigger: TCCTGCTAGTTCCAGCTTTCACTGTGACCAGCAATG...CTTGGGAAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR TCA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGCGAGCATGGCTTCCCTaGAGTTTGCTGACGGGGAAG +
Preference number: 2 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLRAWLP*SLLTGK
Trigger: CTTCCCCGTCAGCAAACTTCAGGGAAGCCATGCTCG...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR TCA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTCGAGCATGGCTTCCCTaGAGTTTGCTGACGGGGAAG +
Preference number: 2 (lower is better)
Translates to: LISPYTYPKGRVNCYIQARAWLP*SLLTGK
Trigger: CTTCCCCGTCAGCAAACTTCAGGGAAGCCATGCTCG...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp TCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTGCAGTCTTTTAATGATCAGAGGAAAGGGTACTaGAGATGTCAACTGGGAGCC +
Preference number: 2 (lower is better)
Translates to: SGCDGLCARCGFVQSFNDQRKGY*RCQLGA
Trigger: GGCTCCCAGTTGACATCTGCAGTACCCTTTCCTCTG...ATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp ACTTGTACAGGGCCACTAGCTGCTCAGGTTTATATGCCTCCTGGGTCATTACGAATACTGCCAGCTTATTaGCAGATTGAGAACCATTGC +
Preference number: 2 (lower is better)
Translates to: TCTGPLAAQVYMPPGSLRILPAY*QIENHC
Trigger: GCAATGGTTCTCAATCTGGCAATAAGCTGGCAGTAT...TCGTAATGACCCAGGAGGCATATAAACCTGAGCAGCTAGTGGCCCTGTACAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp AGAAACCATGATGCCCTACCAATTGGACTGGATCAGCTTGCATGTCAATCTAGTTACAGGGCCACTAGCTaGTCAGGTTTATATGCCTCC +
Preference number: 2 (lower is better)
Translates to: RNHDALPIGLDQLACQSSYRATS*SGLYAS
Trigger: GGAGGCATATAAACCTGAGCAGCTAGTGGCCCTGTA...ACTAGATTGACATGCAAGCTGATCCAGTCCAATTGGTAGGGCATCATGGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp CATCTATGTTTTCTGTGGTCTTTATCAACTCTGAACGATCAGCAGCCTGGAATCACTTTGCCTACAGGCTaGCTAATGCCAGTGGGTGCA +
Preference number: 2 (lower is better)
Translates to: HLCFLWSLSTLNDQQPGITLPTG*LMPVGA
Trigger: TGCACCCACTGGCATTAGCCAGCCTGTAGGCAAAGT...GATTCCAGGCTGCTGATCGTTCAGAGTTGATAAAGACCACAGAAAACATAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
3UTR-3UTR CCA 90 bp CGGTGCACTGTAAGTGCCACATCTCTGGTGGTCCAGGAAGGCTTCACGTCCATTCATCTATGTTTTCTGTaGTCTTTATCAACTCTGAAC +
Preference number: 2 (lower is better)
Translates to: RCTVSATSLVVQEGFTSIHLCFL*SLSTLN
Trigger: GTTCAGAGTTGATAAAGACCACAGAAAACATAGATG...AATGGACGTGAAGCCTTCCTGGACCACCAGAGATGTGGCACTTACAGTGCACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
3UTR-3UTR CCA 90 bp CTTCTACTCCTAGCTCATTGGCATACTGTAATTCTGCTGGCTGGGTTTTCTTTGAACTGCCTCCTCAGCTaGCTCCGCATCAATACCATT +
Preference number: 2 (lower is better)
Translates to: LLLLAHWHTVILLAGFSLNCLLS*LRINTI
Trigger: AATGGTATTGATGCGGAGCCAGCTGAGGAGGCAGTT...CAAAGAAAACCCAGCCAGCAGAATTACAGTATGCCAATGAGCTAGGAGTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
3UTR-3UTR TCA 90 bp ACTTGTACAGGGCCACTAGCTGCTCAGGTTTATATGCCTCCTGGGTCATTACGATTCCTTGTGGTTATGTaGCTGAAATCCATTTCCTTG +
Preference number: 2 (lower is better)
Translates to: TCTGPLAAQVYMPPGSLRFLVVM*LKSISL
Trigger: CAAGGAAATGGATTTCAGTCACATAACCACAAGGAA...TCGTAATGACCCAGGAGGCATATAAACCTGAGCAGCTAGTGGCCCTGTACAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR TCA 90 bp CTATGTTTTCTGTGGTCTTTATCAACTCTGAACGATCAGCAGCCTGGAATCTCCTTCCTCCGAGGTTTTTaGATAACTGCCTCCTCAGCT +
Preference number: 2 (lower is better)
Translates to: LCFLWSLSTLNDQQPGISFLRGF*ITASSA
Trigger: AGCTGAGGAGGCAGTTATTCAAAAACCTCGGAGGAA...GGAGATTCCAGGCTGCTGATCGTTCAGAGTTGATAAAGACCACAGAAAACATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
3UTR-3UTR GCA 90 bp ACTTGTACAGGGCCACTAGCTGCTCAGGTTTATATGCCTCCTGGGTCATTACGAGGATGCCTTCAGAATTaGCAGCAAATTCACAATTCT +
Preference number: 2 (lower is better)
Translates to: TCTGPLAAQVYMPPGSLRGCLQN*QQIHNS
Trigger: AGAATTGTGAATTTGCTGGCAATTCTGAAGGCATCC...TCGTAATGACCCAGGAGGCATATAAACCTGAGCAGCTAGTGGCCCTGTACAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCGTGTTATCTACCCAGTaGAGTGCTTCACCAGGATGG +
Preference number: 2 (lower is better)
Translates to: NDSPHYQTSVHENRPFTAVLSTQ*SASPGW
Trigger: CCATCCTGGTGAAGCACTGCACTGGGTAGATAACAC...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp GCCAGCCAAGAATCCATGAGAAAAGAGACCAATCATCCTGAAAGCCCGGTGCACGACTTTTCTAGTTCCTaGCCTTCTACTCCTATAATT +
Preference number: 2 (lower is better)
Translates to: ASQESMRKETNHPESPVHDFSSS*PSTPII
Trigger: AATTATAGGAGTAGAAGGGCAGGAACTAGAAAAGTC...GTGCACCGGGCTTTCAGGATGATTGGTCTCTTTTCTCATGGATTCTTGGCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432684.6
3UTR-3UTR CCA 90 bp GAGGGAGACTCTCTGAAAGAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAGCTCCTCAGAGTACATaGCCCAATATCCCAAGGCCC +
Preference number: 2 (lower is better)
Translates to: EGDSLKENDVYSGVGIAIAPQST*PNIPRP
Trigger: GGGCCTTGGGATATTGGGCCATGTACTCTGAGGAGC...TATTGCAATGCCTACTCCTGAATAAACATCATTTTCTTTCAGAGAGTCTCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp CTGGTGGTCCAGGAAGGCTTCACGTCCATTGACACATCTATGTTTTCTGTGGTCATGACTTCTTTTGGGTaGAGGAAGTCTCCAATTCAT +
Preference number: 2 (lower is better)
Translates to: LVVQEGFTSIDTSMFSVVMTSFG*RKSPIH
Trigger: ATGAATTGGAGACTTCCTCCACCCAAAAGAAGTCAT...GACCACAGAAAACATAGATGTGTCAATGGACGTGAAGCCTTCCTGGACCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444047.6
3UTR CAA 90 bp CTCAACTTGAGCTTTAGGGTCTCATATACAACAGCTGAGGTACCATaGGATATAGTTCTGAAGAGATCTTTCCCAGTGCAGGACCCATCT +
Preference number: 2 (lower is better)
Translates to: LNLSFRVSYTTAEVP*DIVLKRSFPVQDPS
Trigger: AGATGGGTCCTGCACTGGGAAAGATCTCTTCAGAACTATATCCAATGGTACCTCAGCTGTTGTATATGAGACCCTAAAGCTCAAGTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR TCA 90 bp TCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTGCAGTCTTTTAATGATTCAGACATCTGTGCATaGAAATCGTCCTTTCACGGC +
Preference number: 2 (lower is better)
Translates to: SGCDGLCARCGFVQSFNDSDICA*KSSFHG
Trigger: GCCGTGAAAGGACGATTTTCATGCACAGATGTCTGA...ATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp AGCACAGCCAGCCAAGAATCCATGAGAAAAGAGACCAATCATCCTGAAAGCCCGTGTTCCACAGTAGTTTaGTCATCAGTGATTATGTCT +
Preference number: 2 (lower is better)
Translates to: STASQESMRKETNHPESPCSTVV*SSVIMS
Trigger: AGACATAATCACTGATGAGCAAACTACTGTGGAACA...CGGGCTTTCAGGATGATTGGTCTCTTTTCTCATGGATTCTTGGCTGGCTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
3UTR-3UTR GCA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGACGGCCTCAGCAATGTaGCTCAAGTGTCACTGTGAG +
Preference number: 2 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLTASAM*LKCHCE
Trigger: CTCACAGTGACACTTGAGGCACATTGCTGAGGCCGT...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp TTAATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGGCACCCCATGAAACTTaGTGTCCAGCAGCTCACTCT +
Preference number: 2 (lower is better)
Translates to: LMIVLIIRHLCMKIVLSRAPHET*CPAAHS
Trigger: AGAGTGAGCTGCTGGACAGCAAGTTTCATGGGGTGC...CCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGTTAGGGGCAGGAACCTaGACCTCACCTTGTGCTCCT +
Preference number: 2 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQLGAGT*TSPCAP
Trigger: AGGAGCACAAGGTGAGGTGCAGGTTCCTGCCCCTAA...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp CTATGTTTTCTGTGGTCTTTATCAACTCTGAACGATCAGCAGCCTGGAATCTCCGAAGGTTTGAGAGGTTaGATAGCTGATCTCCTGCTA +
Preference number: 2 (lower is better)
Translates to: LCFLWSLSTLNDQQPGISEGLRG*IADLLL
Trigger: TAGCAGGAGATCAGCTATCCAACCTCTCAAACCTTC...GGAGATTCCAGGCTGCTGATCGTTCAGAGTTGATAAAGACCACAGAAAACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
3UTR-3UTR CCA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTACTGCAGATGTCAACTaGGAGCCCACAAGCTCACAG +
Preference number: 2 (lower is better)
Translates to: LISPYTYPKGRVNCYIQATADVN*EPTSSQ
Trigger: CTGTGAGCTTGTGGGCTCCCAGTTGACATCTGCAGT...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp GAGGGAGACTCTCTGAAAGAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAACTCTCCTTGGCTCATaGCCCCCTCTTCCATCTTCA +
Preference number: 2 (lower is better)
Translates to: EGDSLKENDVYSGVGIAITLLGS*PPLPSS
Trigger: TGAAGATGGAAGAGGGGGCCATGAGCCAAGGAGAGT...TATTGCAATGCCTACTCCTGAATAAACATCATTTTCTTTCAGAGAGTCTCCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp TCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTGCAGTCTTTTAATGATGTCAAAAGTATGACATaGGCAGCACCAGGCCAAAAC +
Preference number: 2 (lower is better)
Translates to: SGCDGLCARCGFVQSFNDVKSMT*AAPGQN
Trigger: GTTTTGGCCTGGTGCTGCCCATGTCATACTTTTGAC...ATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp TCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTGCAGTCTTTTAATGATTCATTCCCTGCTTCCTaGAGACATGCATTAGCAGTG +
Preference number: 2 (lower is better)
Translates to: SGCDGLCARCGFVQSFNDSFPAS*RHALAV
Trigger: CACTGCTAATGCATGTCTCCAGGAAGCAGGGAATGA...ATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CAA 90 bp GACTCTGGAATGGATACGCTAGGGTCTTGTATTGTTGCAGAAGGTTaGAGAGGTTGGATAGCTGATCTCCTGCTAGAACATATATCACAA +
Preference number: 2 (lower is better)
Translates to: DSGMDTLGSCIVAEG*RGWIADLLLEHISQ
Trigger: TTGTGATATATGTTCTAGCAGGAGATCAGCTATCCAACCTCTCAAACCTTCTGCAACAATACAAGACCCTAGCGTATCCATTCCAGAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286196.9
3UTR-3UTR TCA 90 bp CATCTATGTTTTCTGTGGTCTTTATCAACTCTGAACGATCAGCAGCCTGGAATCCCAGCCAAGAATCCATaGGAAAAGAGACCAATCATC +
Preference number: 2 (lower is better)
Translates to: HLCFLWSLSTLNDQQPGIPAKNP*EKRPII
Trigger: GATGATTGGTCTCTTTTCTCATGGATTCTTGGCTGG...GATTCCAGGCTGCTGATCGTTCAGAGTTGATAAAGACCACAGAAAACATAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
3UTR-3UTR GCA 90 bp TTAATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGAGAGATCTTTCCCAGTaGAGGACCCATCTCAAGAGG +
Preference number: 2 (lower is better)
Translates to: LMIVLIIRHLCMKIVLSRRDLSQ*RTHLKR
Trigger: CCTCTTGAGATGGGTCCTGCACTGGGAAAGATCTCT...CCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGACGGCCTCAGCAATGTaGCTCAAGTGTCACTGTGAG +
Preference number: 2 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQTASAM*LKCHCE
Trigger: CTCACAGTGACACTTGAGGCACATTGCTGAGGCCGT...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp GAGGGAGACTCTCTGAAAGAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAGTGTTATCTACCCAGTaGAGTGCTTCACCAGGATGG +
Preference number: 2 (lower is better)
Translates to: EGDSLKENDVYSGVGIAIVLSTQ*SASPGW
Trigger: CCATCCTGGTGAAGCACTGCACTGGGTAGATAACAC...TATTGCAATGCCTACTCCTGAATAAACATCATTTTCTTTCAGAGAGTCTCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGACTCTCCTTGGCTCATaGCCCCCTCTTCCATCTTCA +
Preference number: 2 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQTLLGS*PPLPSS
Trigger: TGAAGATGGAAGAGGGGGCCATGAGCCAAGGAGAGT...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp CTATGTTTTCTGTGGTCTTTATCAACTCTGAACGATCAGCAGCCTGGAATCTCCCTACTCCTAGCTCATTaGCATACTGTAATTCTGCTG +
Preference number: 2 (lower is better)
Translates to: LCFLWSLSTLNDQQPGISLLLAH*HTVILL
Trigger: CAGCAGAATTACAGTATGCCAATGAGCTAGGAGTAG...GGAGATTCCAGGCTGCTGATCGTTCAGAGTTGATAAAGACCACAGAAAACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
3UTR CAA 90 bp TTTTGTGTGTGTCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTaGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGTGC +
Preference number: 2 (lower is better)
Translates to: FCVCQVVMAFVQGVV*CSLLMIVLIIRHLC
Trigger: GCACAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGACACACACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CAA 90 bp GTTTGCTCATCAGTGATTATGTCTTCATCTTCTACTCCTAGCTCATaGGCATACTGTAATTCTGCTGGCTGGGTTTTCTTTGTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: VCSSVIMSSSSTPSS*AYCNSAGWVFFVFL
Trigger: GAGGAAGACAAAGAAAACCCAGCCAGCAGAATTACAGTATGCCAATGAGCTAGGAGTAGAAGATGAAGACATAATCACTGATGAGCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
3UTR-3UTR TCA 90 bp AGTCAATCCTGTCAAAAGCTGAAATTGTACTCAGAGCCAAAAGCAAGTACAGAAGGTCTTTATCAACTCTaGACGATCAGCAGCCTGGAA +
Preference number: 2 (lower is better)
Translates to: SQSCQKLKLYSEPKASTEGLYQL*TISSLE
Trigger: TTCCAGGCTGCTGATCGTTCAGAGTTGATAAAGACC...TTCTGTACTTGCTTTTGGCTCTGAGTACAATTTCAGCTTTTGACAGGATTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286196.9
3UTR-3UTR TCA 90 bp TCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTGCAGTCTTTTAATGATGGTCATTACGAGATCTaGAGTCTAAGTTGTACTTCC +
Preference number: 2 (lower is better)
Translates to: SGCDGLCARCGFVQSFNDGHYEI*SLSCTS
Trigger: GGAAGTACAACTTAGACTTCAGATCTCGTAATGACC...ATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR TCA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCAGTAATGAGAAACCATaGTGCCCTACCAATTGGACT +
Preference number: 2 (lower is better)
Translates to: NDSPHYQTSVHENRPFTASNEKP*CPTNWT
Trigger: AGTCCAATTGGTAGGGCATCATGGTTTCTCATTACT...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR TCA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGAATTACTGCACCCCATaGAACTTGCTGTCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQNYCTP*NLLSSS
Trigger: GCTGCTGGACAGCAAGTTTCATGGGGTGCAGTAATT...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR TCA 90 bp GAGGGAGACTCTCTGAAAGAAAATGATGTTTATTCAGGAGTAGGCATTGCAATATCAGACATCTGTGCATaGAAATCGTCCTTTCACGGC +
Preference number: 2 (lower is better)
Translates to: EGDSLKENDVYSGVGIAISDICA*KSSFHG
Trigger: GCCGTGAAAGGACGATTTTCATGCACAGATGTCTGA...TATTGCAATGCCTACTCCTGAATAAACATCATTTTCTTTCAGAGAGTCTCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp TCCAGCCTTACAAACAGCAAAAGAGATTCCCAGTATAATGTTCACTCCAAATTTAGAGATCTTTCCCAGTaGAGGACCCATCTCAAGAGG +
Preference number: 2 (lower is better)
Translates to: SSLTNSKRDSQYNVHSKFRDLSQ*RTHLKR
Trigger: CCTCTTGAGATGGGTCCTGCACTGGGAAAGATCTCT...AAATTTGGAGTGAACATTATACTGGGAATCTCTTTTGCTGTTTGTAAGGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp AGAAACCATGATGCCCTACCAATTGGACTGGATCAGCTTGCATGTCAATCTAGTATAGCTTTCTATTGCTaGCATAAGCAATCACCACCA +
Preference number: 2 (lower is better)
Translates to: RNHDALPIGLDQLACQSSIAFYC*HKQSPP
Trigger: TGGTGGTGATTGCTTATGGCAGCAATAGAAAGCTAT...ACTAGATTGACATGCAAGCTGATCCAGTCCAATTGGTAGGGCATCATGGTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGCTGCTCAGGTTTATATaGCTCCTGGGTCATTACGAG +
Preference number: 2 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLLLRFI*LLGHYE
Trigger: CTCGTAATGACCCAGGAGGCATATAAACCTGAGCAG...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTATCTACCCAGTGCAGTaGTTCACCAGGATGGCAATA +
Preference number: 2 (lower is better)
Translates to: LISPYTYPKGRVNCYIQAIYPVQ*FTRMAI
Trigger: TATTGCCATCCTGGTGAAGCACTGCACTGGGTAGAT...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp GAGGGAGACTCTCTGAAAGAAAATGATGTTTATTCAGGAGTAGGCATTGCAATACATTGGACAGGGAGTTaGTGGGCAAATGTCCTCATA +
Preference number: 2 (lower is better)
Translates to: EGDSLKENDVYSGVGIAIHWTGS*WANVLI
Trigger: TATGAGGACATTTGCCCAGCAACTCCCTGTCCAATG...TATTGCAATGCCTACTCCTGAATAAACATCATTTTCTTTCAGAGAGTCTCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp GTACTTCCCAGACCTGGAAGAATACAAAGGCAACTATGCCCATGGCAGTTACATAAATGGGACAAATACTaGGTCATTATTCCTCCAAAG +
Preference number: 2 (lower is better)
Translates to: VLPRPGRIQRQLCPWQLHKWDKY*VIIPPK
Trigger: CTTTGGAGGAATAATGACCCAGTATTTGTCCCATTT...ATGTAACTGCCATGGGCATAGTTGCCTTTGTATTCTTCCAGGTCTGGGAAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp TCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTGCAGTCTTTTAATGATCCAGGGATTAGGACATaGACATCTTTAGGAGACATT +
Preference number: 2 (lower is better)
Translates to: SGCDGLCARCGFVQSFNDPGIRT*TSLGDI
Trigger: AATGTCTCCTAAAGATGTCCATGTCCTAATCCCTGG...ATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR TCA 90 bp GAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGTGATTATGTCTTCATCAGGCTTCACGTCCATTaGCACATCTATGTTTTCTGT +
Preference number: 2 (lower is better)
Translates to: EYRLLFHSSLLISDYVFIRLHVH*HIYVFC
Trigger: ACAGAAAACATAGATGTGTCAATGGACGTGAAGCCT...GATGAAGACATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
3UTR-3UTR TCA 90 bp AATGTCCCCGTTTTAAGGTTCATAACCTTAATCATATCTGCAAATCCCTTTGGCAGCTTATTGCCAGATTaGGAACCATTGCTGGTCACA +
Preference number: 2 (lower is better)
Translates to: NVPVLRFITLIISANPFGSLLPD*EPLLVT
Trigger: TGTGACCAGCAATGGTTCTCAATCTGGCAATAAGCT...GCCAAAGGGATTTGCAGATATGATTAAGGTTATGAACCTTAAAACGGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR TCA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCCAGTCAAACAATTTTTaGGACACACCAGAAACACCA +
Preference number: 2 (lower is better)
Translates to: NDSPHYQTSVHENRPFTAQSNNF*DTPETP
Trigger: TGGTGTTTCTGGTGTGTCTCAAAAATTGTTTGACTG...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR TCA 90 bp TTCAGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTGCTGTCTGGAGAAAGTTACATaGATTCTCATCGACGGCCTC +
Preference number: 2 (lower is better)
Translates to: FRFILCGVLITAPHETCCLEKVT*ILIDGL
Trigger: GAGGCCGTCGATGAGAATTCATGTAACTTTCTCCAG...ACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR TCA 90 bp GAGGGAGACTCTCTGAAAGAAAATGATGTTTATTCAGGAGTAGGCATTGCAATACAGAGTTTTAGAAACTaGGCTCTTTGTACCTGGCCA +
Preference number: 2 (lower is better)
Translates to: EGDSLKENDVYSGVGIAIQSFRN*ALCTWP
Trigger: TGGCCAGGTACAAAGAGCTCAGTTTCTAAAACTCTG...TATTGCAATGCCTACTCCTGAATAAACATCATTTTCTTTCAGAGAGTCTCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR TCA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGCAGAGTTTTAGAAACTaGGCTCTTTGTACCTGGCCA +
Preference number: 2 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLQSFRN*ALCTWP
Trigger: TGGCCAGGTACAAAGAGCTCAGTTTCTAAAACTCTG...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp TCATTTCGTAATAAAGATGAACTAGATGACTTCTTTTGGGTGGAGGAAGTCTCCGCAGTGAATACAGACTaGTGTTCCACAGTAGTTTGC +
Preference number: 2 (lower is better)
Translates to: SFRNKDELDDFFWVEEVSAVNTD*CSTVVC
Trigger: GCAAACTACTGTGGAACAGCAGTCTGTATTCACTGC...GGAGACTTCCTCCACCCAAAAGAAGTCATCTAGTTCATCTTTATTACGAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
3UTR-3UTR GCA 90 bp AATGTCCCCGTTTTAAGGTTCATAACCTTAATCATATCTGCAAATCCCTTTGGCTCTATAACATTCAGGTaGTTGCTAATCAGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: NVPVLRFITLIISANPFGSITFR*LLIRAG
Trigger: GCCTGCCCTGATTAGCAAGCACCTGAATGTTATAGA...GCCAAAGGGATTTGCAGATATGATTAAGGTTATGAACCTTAAAACGGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGCTGGAACTAGCAGGATaGCTTCAGAATTGCCAGCAA +
Preference number: 2 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQLELAG*LQNCQQ
Trigger: TTGCTGGCAATTCTGAAGGCATCCTGCTAGTTCCAG...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp TTCAGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTGCTGTCTGGAACTAGCAGGATaGCTTCAGAATTGCCAGCAA +
Preference number: 2 (lower is better)
Translates to: FRFILCGVLITAPHETCCLELAG*LQNCQQ
Trigger: TTGCTGGCAATTCTGAAGGCATCCTGCTAGTTCCAG...ACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGCTGCTCAGGTTTATATaGCTCCTGGGTCATTACGAG +
Preference number: 2 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQLLRFI*LLGHYE
Trigger: CTCGTAATGACCCAGGAGGCATATAAACCTGAGCAG...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp CTACTCCTAGCTCATTGGCATACTGTAATTCTGCTGGCTGGGTTTTCTTTGTCTGACTTTTCTAGTTCCTaGCCTTCTACTCCTATAATT +
Preference number: 2 (lower is better)
Translates to: LLLAHWHTVILLAGFSLSDFSSS*PSTPII
Trigger: AATTATAGGAGTAGAAGGGCAGGAACTAGAAAAGTC...AGACAAAGAAAACCCAGCCAGCAGAATTACAGTATGCCAATGAGCTAGGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
3UTR-3UTR CCA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGGTCAAAAGTATGACATaGGCAGCACCAGGCCAAAAC +
Preference number: 2 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQVKSMT*AAPGQN
Trigger: GTTTTGGCCTGGTGCTGCCCATGTCATACTTTTGAC...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGTCATTCCCTGCTTCCTaGAGACATGCATTAGCAGTG +
Preference number: 2 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQSFPAS*RHALAV
Trigger: CACTGCTAATGCATGTCTCCAGGAAGCAGGGAATGA...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp GAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGTGATTATGTCTTCATCCTAGATGACTTCTTTTaGGTGGAGGAAGTCTCCAAT +
Preference number: 2 (lower is better)
Translates to: EYRLLFHSSLLISDYVFILDDFF*VEEVSN
Trigger: ATTGGAGACTTCCTCCACCCAAAAGAAGTCATCTAG...GATGAAGACATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
3UTR-3UTR TCA 90 bp AGTCAATCCTGTCAAAAGCTGAAATTGTACTCAGAGCCAAAAGCAAGTACAGAAAGGCTTCACGTCCATTaGCACATCTATGTTTTCTGT +
Preference number: 2 (lower is better)
Translates to: SQSCQKLKLYSEPKASTERLHVH*HIYVFC
Trigger: ACAGAAAACATAGATGTGTCAATGGACGTGAAGCCT...TTCTGTACTTGCTTTTGGCTCTGAGTACAATTTCAGCTTTTGACAGGATTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286196.9
3UTR-3UTR TCA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGGTCTTCTCCTCAACTTaGGCTTTAGGGTCTCATATA +
Preference number: 2 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLVFSST*ALGSHI
Trigger: TATATGAGACCCTAAAGCTCAAGTTGAGGAGAAGAC...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR TCA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCAAGGAAATGAACTATTaGTACACACAACAGCTGAGA +
Preference number: 2 (lower is better)
Translates to: NDSPHYQTSVHENRPFTAKEMNY*YTQQLR
Trigger: TCTCAGCTGTTGTGTGTATCAATAGTTCATTTCCTT...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp TCCAGCCTTACAAACAGCAAAAGAGATTCCCAGTATAATGTTCACTCCAAATTTTCTATAACATTCAGGTaGTTGCTAATCAGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: SSLTNSKRDSQYNVHSKFSITFR*LLIRAG
Trigger: GCCTGCCCTGATTAGCAAGCACCTGAATGTTATAGA...AAATTTGGAGTGAACATTATACTGGGAATCTCTTTTGCTGTTTGTAAGGCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp TCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTGCAGTCTTTTAATGATGAGGATTTGTTTCCTTaGTCATTTGGGATACTCATA +
Preference number: 2 (lower is better)
Translates to: SGCDGLCARCGFVQSFNDEDLFP*SFGILI
Trigger: TATGAGTATCCCAAATGAGCAAGGAAACAAATCCTC...ATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp TCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTGCAGTCTTTTAATGATATACAAAGGCAACTATaGCCATGGCAGTTACATATT +
Preference number: 2 (lower is better)
Translates to: SGCDGLCARCGFVQSFNDIQRQL*PWQLHI
Trigger: AATATGTAACTGCCATGGGCATAGTTGCCTTTGTAT...ATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp TTCAGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTGCTGTTGTGAGATCATTCCCTaGTTCCTGGAGACATGCATT +
Preference number: 2 (lower is better)
Translates to: FRFILCGVLITAPHETCCCEIIP*FLETCI
Trigger: AATGCATGTCTCCAGGAAGCAGGGAATGATCTCACA...ACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGTGTGAGATCATTCCCTaGTTCCTGGAGACATGCATT +
Preference number: 2 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQCEIIP*FLETCI
Trigger: AATGCATGTCTCCAGGAAGCAGGGAATGATCTCACA...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGCCAGGGATTAGGACATaGACATCTTTAGGAGACATT +
Preference number: 2 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLPGIRT*TSLGDI
Trigger: AATGTCTCCTAAAGATGTCCATGTCCTAATCCCTGG...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp GAGGGAGACTCTCTGAAAGAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAGGTTTATATGCCTCCTaGGTCATTACGAGATCTGAA +
Preference number: 2 (lower is better)
Translates to: EGDSLKENDVYSGVGIAIGLYAS*VITRSE
Trigger: TTCAGATCTCGTAATGACCCAGGAGGCATATAAACC...TATTGCAATGCCTACTCCTGAATAAACATCATTTTCTTTCAGAGAGTCTCCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp TTAATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGGCATTATTCACAGACTaGAATGAGCCCAGATATCCT +
Preference number: 2 (lower is better)
Translates to: LMIVLIIRHLCMKIVLSRALFTD*NEPRYP
Trigger: AGGATATCTGGGCTCATTCCAGTCTGTGAATAATGC...CCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGCATGGGAAATTAGAATaGTACCGCCAACTCTGGAAA +
Preference number: 2 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLHGKLE*YRQLWK
Trigger: TTTCCAGAGTTGGCGGTACCATTCTAATTTCCCATG...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR TCA 90 bp TTCAGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTGCTGTAAATTCACAATTCTGTaGCAGCAGGGAGAATCCCTT +
Preference number: 2 (lower is better)
Translates to: FRFILCGVLITAPHETCCKFTIL*QQGESL
Trigger: AAGGGATTCTCCCTGCTGTCACAGAATTGTGAATTT...ACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR TCA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGCAGTCAAACAATTTTTaGGACACACCAGAAACACCA +
Preference number: 2 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLQSNNF*DTPETP
Trigger: TGGTGTTTCTGGTGTGTCTCAAAAATTGTTTGACTG...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR TCA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGATTCACAGACTGGAATaGGCCCAGATATCCTTCAAT +
Preference number: 2 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQIHRLE*AQISFN
Trigger: ATTGAAGGATATCTGGGCTCATTCCAGTCTGTGAAT...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp ATACAAAGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTGGATGCCTTCAGAATTaGCAGCAAATTCACAATTCT +
Preference number: 2 (lower is better)
Translates to: IQRQLCPWQLHIINVASFGCLQN*QQIHNS
Trigger: AGAATTGTGAATTTGCTGGCAATTCTGAAGGCATCC...AAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCTTTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCATCTGCAAATCCCTTTaGCCAAGTAAAGTAGTATAT +
Preference number: 2 (lower is better)
Translates to: NDSPHYQTSVHENRPFTAICKSL*PSKVVY
Trigger: ATATACTACTTTACTTGGCCAAAGGGATTTGCAGAT...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR TCA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGCTCATATACAACAGCTaGGGTACCATTGGATATAGT +
Preference number: 2 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQLIYNS*GTIGYS
Trigger: ACTATATCCAATGGTACCTCAGCTGTTGTATATGAG...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR TCA 90 bp GAGGGAGACTCTCTGAAAGAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAAGGAAATGAACTATTaGTACACACAACAGCTGAGA +
Preference number: 2 (lower is better)
Translates to: EGDSLKENDVYSGVGIAIKEMNY*YTQQLR
Trigger: TCTCAGCTGTTGTGTGTATCAATAGTTCATTTCCTT...TATTGCAATGCCTACTCCTGAATAAACATCATTTTCTTTCAGAGAGTCTCCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGTATGAACTCCTATACTaGCAGCTTATTGCCAGATTG +
Preference number: 2 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQYELLY*QLIARL
Trigger: CAATCTGGCAATAAGCTGGCAGTATAGGAGTTCATA...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp TTAATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGGAGGATTTGTTTCCTTaGTCATTTGGGATACTCATA +
Preference number: 2 (lower is better)
Translates to: LMIVLIIRHLCMKIVLSREDLFP*SFGILI
Trigger: TATGAGTATCCCAAATGAGCAAGGAAACAAATCCTC...CCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR GCA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGATACAAAGGCAACTATaGCCATGGCAGTTACATATT +
Preference number: 2 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLIQRQL*PWQLHI
Trigger: AATATGTAACTGCCATGGGCATAGTTGCCTTTGTAT...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp GAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGTGATTATGTCTTCATCCATCTATGTTTTCTGTaGTCTTTATCAACTCTGAAC +
Preference number: 2 (lower is better)
Translates to: EYRLLFHSSLLISDYVFIHLCFL*SLSTLN
Trigger: GTTCAGAGTTGATAAAGACCACAGAAAACATAGATG...GATGAAGACATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
3UTR-3UTR CCA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGCTCTGGAAAACAGCTTaGCAGTTTGTAACTACATAC +
Preference number: 2 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQLWKTA*QFVTTY
Trigger: GTATGTAGTTACAAACTGCCAAGCTGTTTTCCAGAG...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CAA 90 bp GGGAGGTCAAGGAAGACAACGGTTTTTAAAGCAAAAATGATTGTTTaGAGAGAATTATCCTTGGCTACAAGGATCAATAACAAGGATGTT +
Preference number: 2 (lower is better)
Translates to: GRSRKTTVFKAKMIV*RELSLATRINNKDV
Trigger: AACATCCTTGTTATTGATCCTTGTAGCCAAGGATAATTCTCTCAAAACAATCATTTTTGCTTTAAAAACCGTTGTCTTCCTTGACCTCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp TTAATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCATCAGTTTCACTCCTaGGCATTTATCTTAAAGAAA +
Preference number: 2 (lower is better)
Translates to: LMIVLIIRHLCMKIVLSRHQFHS*AFILKK
Trigger: TTTCTTTAAGATAAATGCCCAGGAGTGAAACTGATG...CCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTCATCAGTTTCACTCCTaGGCATTTATCTTAAAGAAA +
Preference number: 2 (lower is better)
Translates to: LISPYTYPKGRVNCYIQAHQFHS*AFILKK
Trigger: TTTCTTTAAGATAAATGCCCAGGAGTGAAACTGATG...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CCA 90 bp GAGGGAGACTCTCTGAAAGAAAATGATGTTTATTCAGGAGTAGGCATTGCAATACAGATTTATACTATGTaGTGTGTTAATTACTGCACC +
Preference number: 2 (lower is better)
Translates to: EGDSLKENDVYSGVGIAIQIYTM*CVNYCT
Trigger: GGTGCAGTAATTAACACACCACATAGTATAAATCTG...TATTGCAATGCCTACTCCTGAATAAACATCATTTTCTTTCAGAGAGTCTCCCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR GCA 72 bp TTCCTTGCTCATTGTTGGCCAAGGGCCGTACTCAGCTaGAAGGTCATCACTCTCCTTGGCTCATGGCCCCCT +
Preference number: 3 (lower is better)
Translates to: FLAHCWPRAVLS*KVITLLGSWPP
Trigger: AGGGGGCCATGAGCCAAGGAGAGTGATGACCTTGCAGCTGAGTACGGCCCTTGGCCAACAATGAGCAAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CCA 72 bp AAGGGCCGTACTCAGCTGCAAGGTCATCACTCTCCTTaGCTCATGGCCCCCTCTTCCATCTTCAAAGCCAGC +
Preference number: 3 (lower is better)
Translates to: KGRTQLQGHHSP*LMAPSSIFKAS
Trigger: GCTGGCTTTGAAGATGGAAGAGGGGGCCATGAGCCAAGGAGAGTGATGACCTTGCAGCTGAGTACGGCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR GCA 72 bp GAGACCAATCATCCTGAAAGCCCGGTGCACTGTAAGTaGCACATCTCTGGTGGTCCAGGAAGGCTTCACGTC +
Preference number: 3 (lower is better)
Translates to: ETNHPESPVHCK*HISGGPGRLHV
Trigger: GACGTGAAGCCTTCCTGGACCACCAGAGATGTGGCACTTACAGTGCACCGGGCTTTCAGGATGATTGGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
3UTR GCA 72 bp GAGTTCTTTAGGGGCAGGAACCTGCACCTCACCTTGTaGTCCTCAGAGTACATGGCCCAATATCCCAAGGCC +
Preference number: 3 (lower is better)
Translates to: EFFRGRNLHLTL*SSEYMAQYPKA
Trigger: GGCCTTGGGATATTGGGCCATGTACTCTGAGGAGCACAAGGTGAGGTGCAGGTTCCTGCCCCTAAAGAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp ACTTGTACAGGGCCACTAGCTGCTCAGGTTTATATGCCTCCTGGGTCATTACGAAGGTCATCACTCTCCTaGGCTCATGGCCCCCTCTTC +
Preference number: 3 (lower is better)
Translates to: TCTGPLAAQVYMPPGSLRRSSLS*AHGPLF
Trigger: GAAGAGGGGGCCATGAGCCAAGGAGAGTGATGACCT...TCGTAATGACCCAGGAGGCATATAAACCTGAGCAGCTAGTGGCCCTGTACAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp AAAGCCCGGTGCACTGTAAGTGCCACATCTCTGGTGGTCCAGGAAGGCTTCACGCTGTTCCACAGTAGTTaGCTCATCAGTGATTATGTC +
Preference number: 3 (lower is better)
Translates to: KARCTVSATSLVVQEGFTLFHSS*LISDYV
Trigger: GACATAATCACTGATGAGCAAACTACTGTGGAACAG...CGTGAAGCCTTCCTGGACCACCAGAGATGTGGCACTTACAGTGCACCGGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
3UTR-3UTR CAA 90 bp AGGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGACTGCTGTTCCACAGTAGTCTTCCTCCGAGGTTTTaGAATAACTGCCTCCTCAGC +
Preference number: 3 (lower is better)
Translates to: RLANASGCSEYRLLFHSSLPPRF*NNCLLS
Trigger: GCTGAGGAGGCAGTTATTCAAAAACCTCGGAGGAAG...ACTACTGTGGAACAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
3UTR TCA 72 bp TTAGAAACTGAGCTCTTTGTACCTGGCCAAGGGCTCTaGTCAGCAAGGTGCCCCTGTGTTATCTACCCAGTG +
Preference number: 3 (lower is better)
Translates to: LETELFVPGQGL*SARCPCVIYPV
Trigger: CACTGGGTAGATAACACAGGGGCACCTTGCTGATCAGAGCCCTTGGCCAGGTACAAAGAGCTCAGTTTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CCA 72 bp GGAACCTGCACCTCACCTTGTGCTCCTCAGAGTACATaGCCCAATATCCCAAGGCCCTTAACACATTTGTCA +
Preference number: 3 (lower is better)
Translates to: GTCTSPCAPQST*PNIPRPLTHLS
Trigger: TGACAAATGTGTTAAGGGCCTTGGGATATTGGGCCATGTACTCTGAGGAGCACAAGGTGAGGTGCAGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR TCA 72 bp GCTGGCTGGGTTTTCTTTGTCTTCCTCCGAGGTTTTTaGATAACTGCCTCCTCAGCTGGCTCCGCATCAATA +
Preference number: 3 (lower is better)
Translates to: AGWVFFVFLRGF*ITASSAGSASI
Trigger: TATTGATGCGGAGCCAGCTGAGGAGGCAGTTATTCAAAAACCTCGGAGGAAGACAAAGAAAACCCAGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
3UTR CCA 72 bp AACCAGAAGAGCCACCACGAGATTCACCACAATCCATaGCTGGAGAATCTGTTCCTCAATTCCTGCTTCCCA +
Preference number: 3 (lower is better)
Translates to: NQKSHHEIHHNP*LENLFLNSCFP
Trigger: TGGGAAGCAGGAATTGAGGAACAGATTCTCCAGCCATGGATTGTGGTGAATCTCGTGGTGGCTCTTCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286196.9
3UTR CCA 72 bp AAAAGGGACAGAGGAAAGGGTACTGCAGATGTCAACTaGGAGCCCACAAGCTCACAGGTCTCTCCTTTATTC +
Preference number: 3 (lower is better)
Translates to: KRDRGKGTADVN*EPTSSQVSPLF
Trigger: GAATAAAGGAGAGACCTGTGAGCTTGTGGGCTCCCAGTTGACATCTGCAGTACCCTTTCCTCTGTCCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp GAGACCAATCATCCTGAAAGCCCGGTGCACTGTAAGTGCCACATCTCTGGTGGTATTGTTGCAGAAGGTTaGAGAGGTTGGATAGCTGAT +
Preference number: 3 (lower is better)
Translates to: ETNHPESPVHCKCHISGGIVAEG*RGWIAD
Trigger: ATCAGCTATCCAACCTCTCAAACCTTCTGCAACAAT...ACCACCAGAGATGTGGCACTTACAGTGCACCGGGCTTTCAGGATGATTGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
3UTR-3UTR CAA 90 bp AGCACAGCCAGCCAAGAATCCATGAGAAAAGAGACCAATCATCCTGAAAGCCCGCTGGCTGGGTTTTCTTaGTCTTCCTCCGAGGTTTTT +
Preference number: 3 (lower is better)
Translates to: STASQESMRKETNHPESPLAGFS*SSSEVF
Trigger: AAAAACCTCGGAGGAAGACAAAGAAAACCCAGCCAG...CGGGCTTTCAGGATGATTGGTCTCTTTTCTCATGGATTCTTGGCTGGCTGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432684.6
3UTR TCA 72 bp ACAATATTCCACACAGCACAGCCAGCCAAGAATCCATaGGAAAAGAGACCAATCATCCTGAAAGCCCGGTGC +
Preference number: 3 (lower is better)
Translates to: TIFHTAQPAKNP*EKRPIILKARC
Trigger: GCACCGGGCTTTCAGGATGATTGGTCTCTTTTCTCATGGATTCTTGGCTGGCTGTGCTGTGTGGAATATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
3UTR CCA 72 bp GGTTATGTGACTGAAATCCATTTCCTTGCTCATTGTTaGCCAAGGGCCGTACTCAGCTGCAAGGTCATCACT +
Preference number: 3 (lower is better)
Translates to: GYVTEIHFLAHC*PRAVLSCKVIT
Trigger: AGTGATGACCTTGCAGCTGAGTACGGCCCTTGGCCAACAATGAGCAAGGAAATGGATTTCAGTCACATAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCCCACAATCCCCCACATaGGCAGCAGCTTTCTCACAT +
Preference number: 3 (lower is better)
Translates to: NDSPHYQTSVHENRPFTAPQSPT*AAAFSH
Trigger: ATGTGAGAAAGCTGCTGCCAATGTGGGGGATTGTGG...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGAGGTCATCACTCTCCTaGGCTCATGGCCCCCTCTTC +
Preference number: 3 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLRSSLS*AHGPLF
Trigger: GAAGAGGGGGCCATGAGCCAAGGAGAGTGATGACCT...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp TCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGCTGCCTTCCTTTCTaGGCTCTAGGGGAGGATTTG +
Preference number: 3 (lower is better)
Translates to: SGCDGLCARCGFVQSFNDSCLPF*ALGEDL
Trigger: CAAATCCTCCCCTAGAGCCAAGAAAGGAAGGCAGCT...ATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp GAGGGAGACTCTCTGAAAGAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAGTTGCCAGTTGGACATaGGACAGGGAGTTGCTGGGC +
Preference number: 3 (lower is better)
Translates to: EGDSLKENDVYSGVGIAIVASWT*DRELLG
Trigger: GCCCAGCAACTCCCTGTCCAATGTCCAACTGGCAAC...TATTGCAATGCCTACTCCTGAATAAACATCATTTTCTTTCAGAGAGTCTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR TCA 72 bp GCTTATTGCCAGATTGAGAACCATTGCTGGTCACAGTaGAAGCTGGAACTAGCAGGATGCCTTCAGAATTGC +
Preference number: 3 (lower is better)
Translates to: AYCQIENHCWSQ*KLELAGCLQNC
Trigger: GCAATTCTGAAGGCATCCTGCTAGTTCCAGCTTTCACTGTGACCAGCAATGGTTCTCAATCTGGCAATAAGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR GCA 72 bp AAATACTTTGCCTACAGGCTGGCTAATGCCAGTGGGTaGAGTGAATACAGACTGCTGTTCCACAGTAGTTTG +
Preference number: 3 (lower is better)
Translates to: KYFAYRLANASG*SEYRLLFHSSL
Trigger: CAAACTACTGTGGAACAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCCTGTAGGCAAAGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
3UTR CCA 72 bp TTGGCTACAAGGATCAATAACAAGGATGTTGCCAGTTaGACATTGGACAGGGAGTTGCTGGGCAAATGTCCT +
Preference number: 3 (lower is better)
Translates to: LATRINNKDVAS*TLDRELLGKCP
Trigger: AGGACATTTGCCCAGCAACTCCCTGTCCAATGTCCAACTGGCAACATCCTTGTTATTGATCCTTGTAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGGTTGCCAGTTGGACATaGGACAGGGAGTTGCTGGGC +
Preference number: 3 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQVASWT*DRELLG
Trigger: GCCCAGCAACTCCCTGTCCAATGTCCAACTGGCAAC...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR GCA 72 bp CTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTaGTGTCCAGCAGCTCACTCTGTTCTTAGGGTTCAT +
Preference number: 3 (lower is better)
Translates to: LCGVLITAPHET*CPAAHSVLRVH
Trigger: ATGAACCCTAAGAACAGAGTGAGCTGCTGGACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CCA 72 bp CAAGGATCAATAACAAGGATGTTGCCAGTTGGACATTaGACAGGGAGTTGCTGGGCAAATGTCCTCATAGAA +
Preference number: 3 (lower is better)
Translates to: QGSITRMLPVGH*TGSCWANVLIE
Trigger: TTCTATGAGGACATTTGCCCAGCAACTCCCTGTCCAATGTCCAACTGGCAACATCCTTGTTATTGATCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp GTACTTCCCAGACCTGGAAGAATACAAAGGCAACTATGCCCATGGCAGTTACATTTCTCACATTTCTCTTaGATGACACGGCTCAAGTGT +
Preference number: 3 (lower is better)
Translates to: VLPRPGRIQRQLCPWQLHFSHFS*MTRLKC
Trigger: ACACTTGAGCCGTGTCATCAAAGAGAAATGTGAGAA...ATGTAACTGCCATGGGCATAGTTGCCTTTGTATTCTTCCAGGTCTGGGAAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp TCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTGCAGTCTTTTAATGATCTGAAATCCATTTCCTaGCTCATTGTTGGCCAAGGG +
Preference number: 3 (lower is better)
Translates to: SGCDGLCARCGFVQSFNDLKSIS*LIVGQG
Trigger: CCCTTGGCCAACAATGAGCAAGGAAATGGATTTCAG...ATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTAACCTGCACCTCACCTaGTGCTCCTCAGAGTACATG +
Preference number: 3 (lower is better)
Translates to: LISPYTYPKGRVNCYIQANLHLT*CSSEYM
Trigger: CATGTACTCTGAGGAGCACAAGGTGAGGTGCAGGTT...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR TCA 72 bp CTCAGGTTTATATGCCTCCTGGGTCATTACGAGATCTaGAGTCTAAGTTGTACTTCCCAGACCTGGAAGAAT +
Preference number: 3 (lower is better)
Translates to: LRFICLLGHYEI*SLSCTSQTWKN
Trigger: ATTCTTCCAGGTCTGGGAAGTACAACTTAGACTTCAGATCTCGTAATGACCCAGGAGGCATATAAACCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CCA 72 bp AAGGCTTCACGTCCATTGACACATCTATGTTTTCTGTaGTCTTTATCAACTCTGAACGATCAGCAGCCTGGA +
Preference number: 3 (lower is better)
Translates to: KASRPLTHLCFL*SLSTLNDQQPG
Trigger: TCCAGGCTGCTGATCGTTCAGAGTTGATAAAGACCACAGAAAACATAGATGTGTCAATGGACGTGAAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
3UTR CCA 72 bp TGCTATCTTACAGTTCTGTATGTCAAAAGTATGACATaGGCAGCACCAGGCCAAAACCAAGGTATCCACAGA +
Preference number: 3 (lower is better)
Translates to: CYLTVLYVKSMT*AAPGQNQGIHR
Trigger: TCTGTGGATACCTTGGTTTTGGCCTGGTGCTGCCCATGTCATACTTTTGACATACAGAACTGTAAGATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp AAGTACAGAAGACTCTGGAATGGATACGCTAGGGTCTTGTATTGTTGCAGAAGGAAGGCTTCACGTCCATaGACACATCTATGTTTTCTG +
Preference number: 3 (lower is better)
Translates to: KYRRLWNGYARVLYCCRRKASRP*THLCFL
Trigger: CAGAAAACATAGATGTGTCAATGGACGTGAAGCCTT...CCTTCTGCAACAATACAAGACCCTAGCGTATCCATTCCAGAGTCTTCTGTACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286196.9
3UTR-3UTR CAA 90 bp AGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTCCCAAGCCAAATTTAGACCTATaGTCAGGGTCAACTGTCTCT +
Preference number: 3 (lower is better)
Translates to: RQLCPWQLHIINVASFPKPNLDL*SGSTVS
Trigger: AGAGACAGTTGACCCTGACAATAGGTCTAAATTTGG...CTTGGGAAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTCAAGGATGTTGCCAGTaGGACATTGGACAGGGAGTT +
Preference number: 3 (lower is better)
Translates to: LISPYTYPKGRVNCYIQAQGCCQ*DIGQGV
Trigger: AACTCCCTGTCCAATGTCCAACTGGCAACATCCTTG...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR TCA 72 bp ATACTCATAGAACTCAGTTCCTTGTGGTTATGTGACTaGAATCCATTTCCTTGCTCATTGTTGGCCAAGGGC +
Preference number: 3 (lower is better)
Translates to: ILIELSSLWLCD*NPFPCSLLAKG
Trigger: GCCCTTGGCCAACAATGAGCAAGGAAATGGATTTCAGTCACATAACCACAAGGAACTGAGTTCTATGAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCAGTCTTCTCCTCAACTaGAGCTTTAGGGTCTCATAT +
Preference number: 3 (lower is better)
Translates to: NDSPHYQTSVHENRPFTASLLLN*SFRVSY
Trigger: ATATGAGACCCTAAAGCTCAAGTTGAGGAGAAGACT...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTATAACATTCAGGTGCTaGCTAATCAGGGCAGGCTCA +
Preference number: 3 (lower is better)
Translates to: LISPYTYPKGRVNCYIQAITFRC*LIRAGS
Trigger: TGAGCCTGCCCTGATTAGCAAGCACCTGAATGTTAT...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp TTAATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCTGAAATCCATTTCCTaGCTCATTGTTGGCCAAGGG +
Preference number: 3 (lower is better)
Translates to: LMIVLIIRHLCMKIVLSRLKSIS*LIVGQG
Trigger: CCCTTGGCCAACAATGAGCAAGGAAATGGATTTCAG...CCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGGCTCTAGGGGAGGATTaGTTTCCTTGCTCATTTGGG +
Preference number: 3 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQALGED*FPCSFG
Trigger: CCCAAATGAGCAAGGAAACAAATCCTCCCCTAGAGC...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGTTGGACTGGATCAGCTaGCATGTCAATCTAGTCCAC +
Preference number: 3 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLLDWIS*HVNLVH
Trigger: GTGGACTAGATTGACATGCAAGCTGATCCAGTCCAA...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR TCA 72 bp TGGGATACTCATAGAACTCAGTTCCTTGTGGTTATGTaGCTGAAATCCATTTCCTTGCTCATTGTTGGCCAA +
Preference number: 3 (lower is better)
Translates to: WDTHRTQFLVVM*LKSISLLIVGQ
Trigger: TTGGCCAACAATGAGCAAGGAAATGGATTTCAGTCACATAACCACAAGGAACTGAGTTCTATGAGTATCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR GCA 72 bp CAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTaGAGTCTTTTAATGATAGTCCTCATTATCAGACAT +
Preference number: 3 (lower is better)
Translates to: QVVMAFVQGVVL*SLLMIVLIIRH
Trigger: ATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CCA 72 bp CTAGGGTCTTGTATTGTTGCAGAAGGTTTGAGAGGTTaGATAGCTGATCTCCTGCTAGAACATATATCACAA +
Preference number: 3 (lower is better)
Translates to: LGSCIVAEGLRG*IADLLLEHISQ
Trigger: TTGTGATATATGTTCTAGCAGGAGATCAGCTATCCAACCTCTCAAACCTTCTGCAACAATACAAGACCCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
3UTR-3UTR CAA 90 bp AGTGAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGTGATTATGTCTTCTTTTCCACAAATACTTaGCCTACAGGCTGGCTAATG +
Preference number: 3 (lower is better)
Translates to: SEYRLLFHSSLLISDYVFFSTNT*PTGWLM
Trigger: CATTAGCCAGCCTGTAGGCAAAGTATTTGTGGAAAA...GAAGACATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
3UTR-3UTR CAA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGATAACATTCAGGTGCTaGCTAATCAGGGCAGGCTCA +
Preference number: 3 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQITFRC*LIRAGS
Trigger: TGAGCCTGCCCTGATTAGCAAGCACCTGAATGTTAT...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGCAGCTTATTGCCAGATaGAGAACCATTGCTGGTCAC +
Preference number: 3 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQQLIAR*RTIAGH
Trigger: GTGACCAGCAATGGTTCTCAATCTGGCAATAAGCTG...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp AGAGGTTGGATAGCTGATCTCCTGCTAGAACATATATCACAACAATATTCCACACTGTTCCACAGTAGTTaGCTCATCAGTGATTATGTC +
Preference number: 3 (lower is better)
Translates to: RGWIADLLLEHISQQYSTLFHSS*LISDYV
Trigger: GACATAATCACTGATGAGCAAACTACTGTGGAACAG...TGTGGAATATTGTTGTGATATATGTTCTAGCAGGAGATCAGCTATCCAACCTCT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
3UTR-3UTR CAA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGACAGCTGAGGTACCATaGGATATAGTTCTGAAGAGA +
Preference number: 3 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLTAEVP*DIVLKR
Trigger: TCTCTTCAGAACTATATCCAATGGTACCTCAGCTGT...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp AATGTCCCCGTTTTAAGGTTCATAACCTTAATCATATCTGCAAATCCCTTTGGCTTCTCACATTTCTCTTaGATGACACGGCTCAAGTGT +
Preference number: 3 (lower is better)
Translates to: NVPVLRFITLIISANPFGFSHFS*MTRLKC
Trigger: ACACTTGAGCCGTGTCATCAAAGAGAAATGTGAGAA...GCCAAAGGGATTTGCAGATATGATTAAGGTTATGAACCTTAAAACGGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTGGAGGATTTGTTTCCTaGCTCATTTGGGATACTCAT +
Preference number: 3 (lower is better)
Translates to: LISPYTYPKGRVNCYIQAGGFVS*LIWDTH
Trigger: ATGAGTATCCCAAATGAGCAAGGAAACAAATCCTCC...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp TTTTTGAATAACTGCCTCCTCAGCTGGCTCCGCATCAATACCATTTTCATTTCGGAAGTCTCCAATTCATaGGTCATCCTTCCAAAATTA +
Preference number: 3 (lower is better)
Translates to: FLNNCLLSWLRINTIFISEVSNS*VILPKL
Trigger: TAATTTTGGAAGGATGACCAATGAATTGGAGACTTC...CGAAATGAAAATGGTATTGATGCGGAGCCAGCTGAGGAGGCAGTTATTCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444047.6
3UTR GCA 72 bp ATATCCCCATACACATATCCTAAAGGCAGAGTTAACTaGTATATCCAAGCTACTTCTTGGCATATCCTTGTC +
Preference number: 3 (lower is better)
Translates to: ISPYTYPKGRVN*YIQATSWHILV
Trigger: GACAAGGATATGCCAAGAAGTAGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CCA 72 bp AAATTAGAATGGTACCGCCAACTCTGGAAAACAGCTTaGCAGTTTGTAACTACATACAACCCATCAGTTTCA +
Preference number: 3 (lower is better)
Translates to: KLEWYRQLWKTA*QFVTTYNPSVS
Trigger: TGAAACTGATGGGTTGTATGTAGTTACAAACTGCCAAGCTGTTTTCCAGAGTTGGCGGTACCATTCTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CCA 72 bp AATTGTCATGGGAAATTAGAATGGTACCGCCAACTCTaGAAAACAGCTTGGCAGTTTGTAACTACATACAAC +
Preference number: 3 (lower is better)
Translates to: NCHGKLEWYRQL*KTAWQFVTTYN
Trigger: GTTGTATGTAGTTACAAACTGCCAAGCTGTTTTCCAGAGTTGGCGGTACCATTCTAATTTCCCATGACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp TTCAGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTGCTGTACAGCTGAGGTACCATaGGATATAGTTCTGAAGAGA +
Preference number: 3 (lower is better)
Translates to: FRFILCGVLITAPHETCCTAEVP*DIVLKR
Trigger: TCTCTTCAGAACTATATCCAATGGTACCTCAGCTGT...ACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp TCCAGCCTTACAAACAGCAAAAGAGATTCCCAGTATAATGTTCACTCCAAATTTAGTCTTCTCCTCAACTaGAGCTTTAGGGTCTCATAT +
Preference number: 3 (lower is better)
Translates to: SSLTNSKRDSQYNVHSKFSLLLN*SFRVSY
Trigger: ATATGAGACCCTAAAGCTCAAGTTGAGGAGAAGACT...AAATTTGGAGTGAACATTATACTGGGAATCTCTTTTGCTGTTTGTAAGGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp TTCAGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTGCTGTAGGATGCCTTCAGAATaGCCAGCAAATTCACAATTC +
Preference number: 3 (lower is better)
Translates to: FRFILCGVLITAPHETCCRMPSE*PANSQF
Trigger: GAATTGTGAATTTGCTGGCAATTCTGAAGGCATCCT...ACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGTGTTCACACAAAAACTaGCACATGAATGTCCACAGC +
Preference number: 3 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQCSHKN*HMNVHS
Trigger: GCTGTGGACATTCATGTGCAAGTTTTTGTGTGAACA...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp AATGTCCCCGTTTTAAGGTTCATAACCTTAATCATATCTGCAAATCCCTTTGGCCCTGCTCAGCCTCTTTaGCTACATAGATTTTTAAAA +
Preference number: 3 (lower is better)
Translates to: NVPVLRFITLIISANPFGPAQPL*LHRFLK
Trigger: TTTTAAAAATCTATGTAGCAAAAGAGGCTGAGCAGG...GCCAAAGGGATTTGCAGATATGATTAAGGTTATGAACCTTAAAACGGGGACATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR-3UTR CAA 90 bp TTAATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGGTCTCTATCATCAATTaGTCAATCCTCTTCTGTTCT +
Preference number: 3 (lower is better)
Translates to: LMIVLIIRHLCMKIVLSRVSIIN*SILFCS
Trigger: AGAACAGAAGAGGATTGACAAATTGATGATAGAGAC...CCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR TCA 72 bp AAATCTCCCTCTATGATCCTGATGTACAACCAGATATaGGAACCACTAGTACAGATTATAATGAGAAGCAAC +
Preference number: 3 (lower is better)
Translates to: KSPSMILMYNQI*EPLVQIIMRSN
Trigger: GTTGCTTCTCATTATAATCTGTACTAGTGGTTCTCATATCTGGTTGTACATCAGGATCATAGAGGGAGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CCA 72 bp AAGGTTCATAACCTTAATCATATCTGCAAATCCCTTTaGCCAAGTAAAGTAGTATATTCACAAGTTCCAGGG +
Preference number: 3 (lower is better)
Translates to: KVHNLNHICKSL*PSKVVYSQVPG
Trigger: CCCTGGAACTTGTGAATATACTACTTTACTTGGCCAAAGGGATTTGCAGATATGATTAAGGTTATGAACCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CCA 72 bp TCATTTCGTAATAAAGATGAACTAGATGACTTCTTTTaGGTGGAGGAAGTCTCCAATTCATTGGTCATCCTT +
Preference number: 3 (lower is better)
Translates to: SFRNKDELDDFF*VEEVSNSLVIL
Trigger: AAGGATGACCAATGAATTGGAGACTTCCTCCACCCAAAAGAAGTCATCTAGTTCATCTTTATTACGAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444047.6
3UTR-3UTR CAA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGCCTGCTCAGCCTCTTTaGCTACATAGATTTTTAAAA +
Preference number: 3 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQPAQPL*LHRFLK
Trigger: TTTTAAAAATCTATGTAGCAAAAGAGGCTGAGCAGG...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR GCA 72 bp TGTCCCCGTTTTAAGGTTCATAACCTTAATCATATCTaGAAATCCCTTTGGCCAAGTAAAGTAGTATATTCA +
Preference number: 3 (lower is better)
Translates to: CPRFKVHNLNHI*KSLWPSKVVYS
Trigger: TGAATATACTACTTTACTTGGCCAAAGGGATTTGCAGATATGATTAAGGTTATGAACCTTAAAACGGGGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CCA 72 bp TCATTTCGTAATAAAGATGAACTAGATGACTTCTTTTaGGTGGAGGAAGTCTCCAATTCTTCCAAAATTATG +
Preference number: 3 (lower is better)
Translates to: SFRNKDELDDFF*VEEVSNSSKIM
Trigger: CATAATTTTGGAAGAATTGGAGACTTCCTCCACCCAAAAGAAGTCATCTAGTTCATCTTTATTACGAAATGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432684.6
CDS-3UTR CCA 90 bp TACAGGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGACTGCTGTTCCACAGTGGCCTCCGGGACCTGTaGGACGCCGGGGCTTCGTGG +
Preference number: 4 (lower is better)
Translates to: YRLANASGCSEYRLLFHSGLRDL*DAGASW
Trigger: CCACGAAGCCCCGGCGTCCCACAGGTCCCGGAGGCC...ACTGTGGAACAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432684.6
CDS-3UTR CCA 90 bp AGTGCCACATCTCTGGTGGTCCAGGAAGGCTTCACGTCCATTGACACATCTATGCGTGGAGGACGCAGGTaGCCCTCCTCCAGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: SATSLVVQEGFTSIDTSMRGGRR*PSSSRA
Trigger: GGCTCGGCTGGAGGAGGGCCACCTGCGTCCTCCACG...CATAGATGTGTCAATGGACGTGAAGCCTTCCTGGACCACCAGAGATGTGGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CCA 90 bp AGCACAGCCAGCCAAGAATCCATGAGAAAAGAGACCAATCATCCTGAAAGCCCGCGTGGAGGACGCAGGTaGCCCTCCTCCAGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: STASQESMRKETNHPESPRGGRR*PSSSRA
Trigger: GGCTCGGCTGGAGGAGGGCCACCTGCGTCCTCCACG...CGGGCTTTCAGGATGATTGGTCTCTTTTCTCATGGATTCTTGGCTGGCTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR GCA 90 bp AGTGCCACATCTCTGGTGGTCCAGGAAGGCTTCACGTCCATTGACACATCTATGAGTCAGTCCTCATGGTaGTCTCCCCGCGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SATSLVVQEGFTSIDTSMSQSSW*SPRGAA
Trigger: GGCAGCCCCGCGGGGAGAGCACCATGAGGACTGACT...CATAGATGTGTCAATGGACGTGAAGCCTTCCTGGACCACCAGAGATGTGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR CCA 90 bp GCCCGGTGCACTGTAAGTGCCACATCTCTGGTGGTCCAGGAAGGCTTCACGTCCACTTTGCCTACAGGCTaGCTAATGCCAGTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: ARCTVSATSLVVQEGFTSTLPTG*LMPVGA
Trigger: TGCACCCACTGGCATTAGCCAGCCTGTAGGCAAAGT...GGACGTGAAGCCTTCCTGGACCACCAGAGATGTGGCACTTACAGTGCACCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR GCA 90 bp CTCTGGTGGTCCAGGAAGGCTTCACGTCCATTGACACATCTATGTTTTCTGTGGAGTCAGTCCTCATGGTaGTCTCCCCGCGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LWWSRKASRPLTHLCFLWSQSSW*SPRGAA
Trigger: GGCAGCCCCGCGGGGAGAGCACCATGAGGACTGACT...CCACAGAAAACATAGATGTGTCAATGGACGTGAAGCCTTCCTGGACCACCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR CCA 90 bp CTGAAAGCCCGGTGCACTGTAAGTGCCACATCTCTGGTGGTCCAGGAAGGCTTCGTGCCACATCTCTGGTaGTCCAGGAAGGCTTCACGT +
Preference number: 4 (lower is better)
Translates to: LKARCTVSATSLVVQEGFVPHLW*SRKASR
Trigger: ACGTGAAGCCTTCCTGGACCACCAGAGATGTGGCAC...GAAGCCTTCCTGGACCACCAGAGATGTGGCACTTACAGTGCACCGGGCTTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
3UTR CAA 72 bp CAAGGGCCGTACTCAGCTGCAAGGTCATCACTCTCCTaGGCTCATGGCCCCCTCTTCCATCTTCAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: QGPYSAARSSLS*AHGPLFHLQSQ
Trigger: CTGGCTTTGAAGATGGAAGAGGGGGCCATGAGCCAAGGAGAGTGATGACCTTGCAGCTGAGTACGGCCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp CGGTGCACTGTAAGTGCCACATCTCTGGTGGTCCAGGAAGGCTTCACGTCCATTTCATCTTGGCACAGGTaGAAGAGCTCGTGGAGGACG +
Preference number: 4 (lower is better)
Translates to: RCTVSATSLVVQEGFTSISSWHR*KSSWRT
Trigger: CGTCCTCCACGAGCTCTTCCACCTGTGCCAAGATGA...AATGGACGTGAAGCCTTCCTGGACCACCAGAGATGTGGCACTTACAGTGCACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286196.9
CDS-3UTR CCA 90 bp AGTGCCACATCTCTGGTGGTCCAGGAAGGCTTCACGTCCATTGACACATCTATGGTGCCACATCTCTGGTaGTCCAGGAAGGCTTCACGT +
Preference number: 4 (lower is better)
Translates to: SATSLVVQEGFTSIDTSMVPHLW*SRKASR
Trigger: ACGTGAAGCCTTCCTGGACCACCAGAGATGTGGCAC...CATAGATGTGTCAATGGACGTGAAGCCTTCCTGGACCACCAGAGATGTGGCACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CCA 90 bp TACTTTGCCTACAGGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGACTGCTGTTGACTTGGCACAGGTaGAAGAGCTCGTGGAGGACG +
Preference number: 4 (lower is better)
Translates to: YFAYRLANASGCSEYRLLLTWHR*KSSWRT
Trigger: CGTCCTCCACGAGCTCTTCCACCTGTGCCAAGTCAA...CAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCCTGTAGGCAAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS-3UTR TCA 90 bp GCCTACAGGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGACTGCTGTTCCACGGTCTTTATCAACTCTaGACGATCAGCAGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: AYRLANASGCSEYRLLFHGLYQL*TISSLE
Trigger: TTCCAGGCTGCTGATCGTTCAGAGTTGATAAAGACC...GTGGAACAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCCTGTAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR GCA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCAGTCAGTCCTCATGGTaGTCTCCCCGCGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: NDSPHYQTSVHENRPFTASQSSW*SPRGAA
Trigger: GGCAGCCCCGCGGGGAGAGCACCATGAGGACTGACT...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409883.7
CDS-3UTR CCA 90 bp ATATATCACAACAATATTCCACACAGCACAGCCAGCCAAGAATCCATGAGAAAACGTGGAGGACGCAGGTaGCCCTCCTCCAGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: IYHNNIPHSTASQESMRKRGGRR*PSSSRA
Trigger: GGCTCGGCTGGAGGAGGGCCACCTGCGTCCTCCACG...TTTTCTCATGGATTCTTGGCTGGCTGTGCTGTGTGGAATATTGTTGTGATATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR CCA 90 bp AGAGATCTTTCCCAGTGCAGGACCCATCTCAAGAGGGGGATTTCCTGGAAAACCACTCTCCTTGGCTCATaGCCCCCTCTTCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: RDLSQCRTHLKRGISWKTTLLGS*PPLPSS
Trigger: TGAAGATGGAAGAGGGGGCCATGAGCCAAGGAGAGT...GGTTTTCCAGGAAATCCCCCTCTTGAGATGGGTCCTGCACTGGGAAAGATCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGGCGGGGATGTTGCGGTaGGAGGCGTGCAGGGACCTG +
Preference number: 4 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLAGMLR*EACRDL
Trigger: CAGGTCCCTGCACGCCTCTCACCGCAACATCCCCGC...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409444.6
CDS-3UTR GCA 90 bp AGAAACCATGATGCCCTACCAATTGGACTGGATCAGCTTGCATGTCAATCTAGTTGGCGACCGTGGCGCTaGAATCACAGCTTTCCCGTG +
Preference number: 4 (lower is better)
Translates to: RNHDALPIGLDQLACQSSWRPWR*NHSFPV
Trigger: CACGGGAAAGCTGTGATTGCAGCGCCACGGTCGCCA...ACTAGATTGACATGCAAGCTGATCCAGTCCAATTGGTAGGGCATCATGGTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409444.6
CDS-3UTR GCA 90 bp TTCAGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTGCTGTCCGCGCGCAGCGCCCTaGGGGGATGTTGCGGTGAGA +
Preference number: 4 (lower is better)
Translates to: FRFILCGVLITAPHETCCPRAAP*GDVAVR
Trigger: TCTCACCGCAACATCCCCGCAGGGCGCTGCGCGCGG...ACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409444.6
CDS-3UTR CCA 90 bp ATAATGTTCACTCCAAATTTAGACCTATTGTCAGGGTCAACTGTCTCTATCATCCGTGGAGGACGCAGGTaGCCCTCCTCCAGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: IMFTPNLDLLSGSTVSIIRGGRR*PSSSRA
Trigger: GGCTCGGCTGGAGGAGGGCCACCTGCGTCCTCCACG...GATGATAGAGACAGTTGACCCTGACAATAGGTCTAAATTTGGAGTGAACATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409883.7
CDS-3UTR CCA 90 bp AGTGCCACATCTCTGGTGGTCCAGGAAGGCTTCACGTCCATTGACACATCTATGAACTGCCTCCTCAGCTaGCTCCGCATCAATACCATT +
Preference number: 4 (lower is better)
Translates to: SATSLVVQEGFTSIDTSMNCLLS*LRINTI
Trigger: AATGGTATTGATGCGGAGCCAGCTGAGGAGGCAGTT...CATAGATGTGTCAATGGACGTGAAGCCTTCCTGGACCACCAGAGATGTGGCACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CCA 90 bp GCCTACAGGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGACTGCTGTTCCACATTCACCACAATCCATaGCTGGAGAATCTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: AYRLANASGCSEYRLLFHIHHNP*LENLFL
Trigger: GAGGAACAGATTCTCCAGCCATGGATTGTGGTGAAT...GTGGAACAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCCTGTAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286196.9
CDS-3UTR CCA 90 bp GTACTTCCCAGACCTGGAAGAATACAAAGGCAACTATGCCCATGGCAGTTACATCCAGGAGCAGAAATCTaGCGACCGTGGCGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: VLPRPGRIQRQLCPWQLHPGAEI*RPWRCN
Trigger: ATTGCAGCGCCACGGTCGCCAGATTTCTGCTCCTGG...ATGTAACTGCCATGGGCATAGTTGCCTTTGTATTCTTCCAGGTCTGGGAAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409444.6
CDS-3UTR CCA 90 bp GTACTTCCCAGACCTGGAAGAATACAAAGGCAACTATGCCCATGGCAGTTACATTGCAGGGACCTGGATTaGCCAGTCCAGACTAGCCCT +
Preference number: 4 (lower is better)
Translates to: VLPRPGRIQRQLCPWQLHCRDLD*PVQTSP
Trigger: AGGGCTAGTCTGGACTGGCCAATCCAGGTCCCTGCA...ATGTAACTGCCATGGGCATAGTTGCCTTTGTATTCTTCCAGGTCTGGGAAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409444.6
CDS-3UTR CCA 90 bp ACTTGTACAGGGCCACTAGCTGCTCAGGTTTATATGCCTCCTGGGTCATTACGAACTCTCCTTGGCTCATaGCCCCCTCTTCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: TCTGPLAAQVYMPPGSLRTLLGS*PPLPSS
Trigger: TGAAGATGGAAGAGGGGGCCATGAGCCAAGGAGAGT...TCGTAATGACCCAGGAGGCATATAAACCTGAGCAGCTAGTGGCCCTGTACAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp CCTTCCTTTCTTGGCTCTAGGGGAGGATTTGTTTCCTTGCTCATTTGGGATACTGGTCATCACTCTCCTTaGCTCATGGCCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PSFLGSRGGFVSLLIWDTGHHSP*LMAPSS
Trigger: GGAAGAGGGGGCCATGAGCCAAGGAGAGTGATGACC...AGTATCCCAAATGAGCAAGGAAACAAATCCTCCCCTAGAGCCAAGAAAGGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CAA 72 bp ATAGAGTTCTTTAGGGGCAGGAACCTGCACCTCACCTaGTGCTCCTCAGAGTACATGGCCCAATATCCCAAG +
Preference number: 4 (lower is better)
Translates to: IEFFRGRNLHLT*CSSEYMAQYPK
Trigger: CTTGGGATATTGGGCCATGTACTCTGAGGAGCACAAGGTGAGGTGCAGGTTCCTGCCCCTAAAGAACTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp TACTTTGCCTACAGGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGACTGCTGTTTTTCTGTCTTCTTTaGACAGGAGCCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: YFAYRLANASGCSEYRLLFFCLL*TGASGC
Trigger: GCACCCAGAGGCTCCTGTTCAAAGAAGACAGAAAAA...CAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCCTGTAGGCAAAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR TCA 90 bp AGTGCCACATCTCTGGTGGTCCAGGAAGGCTTCACGTCCATTGACACATCTATGTTCCTCCGAGGTTTTTaGATAACTGCCTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SATSLVVQEGFTSIDTSMFLRGF*ITASSA
Trigger: AGCTGAGGAGGCAGTTATTCAAAAACCTCGGAGGAA...CATAGATGTGTCAATGGACGTGAAGCCTTCCTGGACCACCAGAGATGTGGCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR GCA 90 bp CTCTGGTGGTCCAGGAAGGCTTCACGTCCATTGACACATCTATGTTTTCTGTGGATCCTGAAAGCCCGGTaGACTGTAAGTGCCACATCT +
Preference number: 4 (lower is better)
Translates to: LWWSRKASRPLTHLCFLWILKAR*TVSATS
Trigger: AGATGTGGCACTTACAGTGCACCGGGCTTTCAGGAT...CCACAGAAAACATAGATGTGTCAATGGACGTGAAGCCTTCCTGGACCACCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR GCA 90 bp TTCAGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTGCTGTGCCCTGCGGGGATGTTaGGGTGAGAGGCGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: FRFILCGVLITAPHETCCALRGC*GERRAG
Trigger: CCCTGCACGCCTCTCACCGCAACATCCCCGCAGGGC...ACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409444.6
CDS-3UTR GCA 90 bp AGAGATCTTTCCCAGTGCAGGACCCATCTCAAGAGGGGGATTTCCTGGAAAACCAGGTATCCACAGAGCTaGCTTCCTTTCTTGGCTCTA +
Preference number: 4 (lower is better)
Translates to: RDLSQCRTHLKRGISWKTRYPQS*LPFLAL
Trigger: TAGAGCCAAGAAAGGAAGGCAGCTCTGTGGATACCT...GGTTTTCCAGGAAATCCCCCTCTTGAGATGGGTCCTGCACTGGGAAAGATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp GAACTCCTATACTGCCAGCTTATTGCCAGATTGAGAACCATTGCTGGTCACAGTTTAGGGGCAGGAACCTaGACCTCACCTTGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ELLYCQLIARLRTIAGHSLGAGT*TSPCAP
Trigger: AGGAGCACAAGGTGAGGTGCAGGTTCCTGCCCCTAA...ACTGTGACCAGCAATGGTTCTCAATCTGGCAATAAGCTGGCAGTATAGGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp GAGACCAATCATCCTGAAAGCCCGGTGCACTGTAAGTGCCACATCTCTGGTGGTTTGAACAGGAGCCTCTaGGTGCTCTTTGAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: ETNHPESPVHCKCHISGGLNRSL*VLFEFF
Trigger: AAAGAACTCAAAGAGCACCCAGAGGCTCCTGTTCAA...ACCACCAGAGATGTGGCACTTACAGTGCACCGGGCTTTCAGGATGATTGGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR CCA 90 bp GAACTCCTATACTGCCAGCTTATTGCCAGATTGAGAACCATTGCTGGTCACAGTGTGCCACATCTCTGGTaGTCCAGGAAGGCTTCACGT +
Preference number: 4 (lower is better)
Translates to: ELLYCQLIARLRTIAGHSVPHLW*SRKASR
Trigger: ACGTGAAGCCTTCCTGGACCACCAGAGATGTGGCAC...ACTGTGACCAGCAATGGTTCTCAATCTGGCAATAAGCTGGCAGTATAGGAGTTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp AGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTCCCAAGAGGCGTGCAGGGACCTaGATTGGCCAGTCCAGACTA +
Preference number: 4 (lower is better)
Translates to: RQLCPWQLHIINVASFPKRRAGT*IGQSRL
Trigger: TAGTCTGGACTGGCCAATCCAGGTCCCTGCACGCCT...CTTGGGAAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409444.6
CDS-3UTR CCA 90 bp AGAGATCTTTCCCAGTGCAGGACCCATCTCAAGAGGGGGATTTCCTGGAAAACCGTCAAAAGTATGACATaGGCAGCACCAGGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: RDLSQCRTHLKRGISWKTVKSMT*AAPGQN
Trigger: GTTTTGGCCTGGTGCTGCCCATGTCATACTTTTGAC...GGTTTTCCAGGAAATCCCCCTCTTGAGATGGGTCCTGCACTGGGAAAGATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CAA 72 bp TGCTGGCTGGGTTTTCTTTGTCTTCCTCCGAGGTTTTaGAATAACTGCCTCCTCAGCTGGCTCCGCATCAAT +
Preference number: 4 (lower is better)
Translates to: CWLGFLCLPPRF*NNCLLSWLRIN
Trigger: ATTGATGCGGAGCCAGCTGAGGAGGCAGTTATTCAAAAACCTCGGAGGAAGACAAAGAAAACCCAGCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS-3UTR TCA 90 bp CCTTCCTTTCTTGGCTCTAGGGGAGGATTTGTTTCCTTGCTCATTTGGGATACTCTTCGACCAGCAGTCTaGGCAAGGCCTTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: PSFLGSRGGFVSLLIWDTLRPAV*ARPSKE
Trigger: TTCTTTGGAAGGCCTTGCTCAGACTGCTGGTCGAAG...AGTATCCCAAATGAGCAAGGAAACAAATCCTCCCCTAGAGCCAAGAAAGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp CTGGTGGTCCAGGAAGGCTTCACGTCCATTGACACATCTATGTTTTCTGTGGTCTTCCTCCGAGGTTTTTaGATAACTGCCTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LVVQEGFTSIDTSMFSVVFLRGF*ITASSA
Trigger: AGCTGAGGAGGCAGTTATTCAAAAACCTCGGAGGAA...GACCACAGAAAACATAGATGTGTCAATGGACGTGAAGCCTTCCTGGACCACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR TCA 90 bp GGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGACTGCTGTTCCACAGTAGTTGAGAGGTTGGATAGCTaGTCTCCTGCTAGAACATAT +
Preference number: 4 (lower is better)
Translates to: GWLMPVGAVNTDCCSTVVERLDS*SPARTY
Trigger: ATATGTTCTAGCAGGAGATCAGCTATCCAACCTCTC...AACTACTGTGGAACAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR GCA 90 bp TGCTGGCTGGGTTTTCTTTGTCTTCCTCCGAGGTTTTTGAATAACTGCCTCCTCAGGTTTTTGAATAACTaGCTCCTCAGCTGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: CWLGFLCLPPRFLNNCLLRFLNN*LLSWLR
Trigger: GCGGAGCCAGCTGAGGAGGCAGTTATTCAAAAACCT...GAGGAGGCAGTTATTCAAAAACCTCGGAGGAAGACAAAGAAAACCCAGCCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CCA 90 bp TCAATCCTGTCAAAAGCTGAAATTGTACTCAGAGCCAAAAGCAAGTACAGAAGAAGGTGGAAGAGCTCGTaGAGGACGCAGGTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SILSKAEIVLRAKSKYRRRWKSS*RTQVAL
Trigger: GAGGGCCACCTGCGTCCTCCACGAGCTCTTCCACCT...TCTTCTGTACTTGCTTTTGGCTCTGAGTACAATTTCAGCTTTTGACAGGATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286196.9
CDS-3UTR CCA 90 bp CACAAATACTTTGCCTACAGGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGAAACTGCCTCCTCAGCTaGCTCCGCATCAATACCATT +
Preference number: 4 (lower is better)
Translates to: HKYFAYRLANASGCSEYRNCLLS*LRINTI
Trigger: AATGGTATTGATGCGGAGCCAGCTGAGGAGGCAGTT...TCTGTATTCACTGCACCCACTGGCATTAGCCAGCCTGTAGGCAAAGTATTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CCA 90 bp AGAGATCTTTCCCAGTGCAGGACCCATCTCAAGAGGGGGATTTCCTGGAAAACCATTCACCACAATCCATaGCTGGAGAATCTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: RDLSQCRTHLKRGISWKTIHHNP*LENLFL
Trigger: GAGGAACAGATTCTCCAGCCATGGATTGTGGTGAAT...GGTTTTCCAGGAAATCCCCCTCTTGAGATGGGTCCTGCACTGGGAAAGATCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp AGAAACCATGATGCCCTACCAATTGGACTGGATCAGCTTGCATGTCAATCTAGTTTGACTTGGCACAGGTaGAAGAGCTCGTGGAGGACG +
Preference number: 4 (lower is better)
Translates to: RNHDALPIGLDQLACQSSLTWHR*KSSWRT
Trigger: CGTCCTCCACGAGCTCTTCCACCTGTGCCAAGTCAA...ACTAGATTGACATGCAAGCTGATCCAGTCCAATTGGTAGGGCATCATGGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp GGTGCAGTGAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGTGATTATGCTTCGACCAGCAGTCTaGGCAAGGCCTTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: GAVNTDCCSTVVCSSVIMLRPAV*ARPSKE
Trigger: TTCTTTGGAAGGCCTTGCTCAGACTGCTGGTCGAAG...CATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTCACTGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR TCA 90 bp GCCAGCCAAGAATCCATGAGAAAAGAGACCAATCATCCTGAAAGCCCGGTGCACTTTGAGTTCTTTAGTTaGTGGCTCATTGCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: ASQESMRKETNHPESPVHFEFFS*WLIALR
Trigger: TCTGAGGGCAATGAGCCATCAACTAAAGAACTCAAA...GTGCACCGGGCTTTCAGGATGATTGGTCTCTTTTCTCATGGATTCTTGGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR TCA 90 bp CCACACAGCACAGCCAGCCAAGAATCCATGAGAAAAGAGACCAATCATCCTGAATTTTTCTGTCTTCTTTaGACAGGAGCCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: PHSTASQESMRKETNHPEFFCLL*TGASGC
Trigger: GCACCCAGAGGCTCCTGTTCAAAGAAGACAGAAAAA...TTCAGGATGATTGGTCTCTTTTCTCATGGATTCTTGGCTGGCTGTGCTGTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR TCA 90 bp GGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGACTGCTGTTCCACAGTAGTTAGGCTTCACGTCCATTaGCACATCTATGTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: GWLMPVGAVNTDCCSTVVRLHVH*HIYVFC
Trigger: ACAGAAAACATAGATGTGTCAATGGACGTGAAGCCT...AACTACTGTGGAACAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR TCA 90 bp ACTTGTACAGGGCCACTAGCTGCTCAGGTTTATATGCCTCCTGGGTCATTACGACCAGCCAAGAATCCATaGGAAAAGAGACCAATCATC +
Preference number: 4 (lower is better)
Translates to: TCTGPLAAQVYMPPGSLRPAKNP*EKRPII
Trigger: GATGATTGGTCTCTTTTCTCATGGATTCTTGGCTGG...TCGTAATGACCCAGGAGGCATATAAACCTGAGCAGCTAGTGGCCCTGTACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp AGAGATCTTTCCCAGTGCAGGACCCATCTCAAGAGGGGGATTTCCTGGAAAACCGTCTTCTCCTCAACTTaGGCTTTAGGGTCTCATATA +
Preference number: 4 (lower is better)
Translates to: RDLSQCRTHLKRGISWKTVFSST*ALGSHI
Trigger: TATATGAGACCCTAAAGCTCAAGTTGAGGAGAAGAC...GGTTTTCCAGGAAATCCCCCTCTTGAGATGGGTCCTGCACTGGGAAAGATCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp CCTTCCTTTCTTGGCTCTAGGGGAGGATTTGTTTCCTTGCTCATTTGGGATACTAATTACTGCACCCCATaGAACTTGCTGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PSFLGSRGGFVSLLIWDTNYCTP*NLLSSS
Trigger: GCTGCTGGACAGCAAGTTTCATGGGGTGCAGTAATT...AGTATCCCAAATGAGCAAGGAAACAAATCCTCCCCTAGAGCCAAGAAAGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp GTACTTCCCAGACCTGGAAGAATACAAAGGCAACTATGCCCATGGCAGTTACATTACAGGGCCACTAGCTaGTCAGGTTTATATGCCTCC +
Preference number: 4 (lower is better)
Translates to: VLPRPGRIQRQLCPWQLHYRATS*SGLYAS
Trigger: GGAGGCATATAAACCTGAGCAGCTAGTGGCCCTGTA...ATGTAACTGCCATGGGCATAGTTGCCTTTGTATTCTTCCAGGTCTGGGAAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp AGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTCCCAAGACGGCCTCAGCAATGTaGCTCAAGTGTCACTGTGAG +
Preference number: 4 (lower is better)
Translates to: RQLCPWQLHIINVASFPKTASAM*LKCHCE
Trigger: CTCACAGTGACACTTGAGGCACATTGCTGAGGCCGT...CTTGGGAAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp GAACTCCTATACTGCCAGCTTATTGCCAGATTGAGAACCATTGCTGGTCACAGTGTGTTATCTACCCAGTaGAGTGCTTCACCAGGATGG +
Preference number: 4 (lower is better)
Translates to: ELLYCQLIARLRTIAGHSVLSTQ*SASPGW
Trigger: CCATCCTGGTGAAGCACTGCACTGGGTAGATAACAC...ACTGTGACCAGCAATGGTTCTCAATCTGGCAATAAGCTGGCAGTATAGGAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp CCTTCCTTTCTTGGCTCTAGGGGAGGATTTGTTTCCTTGCTCATTTGGGATACTAACTGCCTCCTCAGCTaGCTCCGCATCAATACCATT +
Preference number: 4 (lower is better)
Translates to: PSFLGSRGGFVSLLIWDTNCLLS*LRINTI
Trigger: AATGGTATTGATGCGGAGCCAGCTGAGGAGGCAGTT...AGTATCCCAAATGAGCAAGGAAACAAATCCTCCCCTAGAGCCAAGAAAGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp AGAAACCATGATGCCCTACCAATTGGACTGGATCAGCTTGCATGTCAATCTAGTACTTTGCCTACAGGCTaGCTAATGCCAGTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: RNHDALPIGLDQLACQSSTLPTG*LMPVGA
Trigger: TGCACCCACTGGCATTAGCCAGCCTGTAGGCAAAGT...ACTAGATTGACATGCAAGCTGATCCAGTCCAATTGGTAGGGCATCATGGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp CTTCTACTCCTAGCTCATTGGCATACTGTAATTCTGCTGGCTGGGTTTTCTTTGACTTTGCCTACAGGCTaGCTAATGCCAGTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: LLLLAHWHTVILLAGFSLTLPTG*LMPVGA
Trigger: TGCACCCACTGGCATTAGCCAGCCTGTAGGCAAAGT...CAAAGAAAACCCAGCCAGCAGAATTACAGTATGCCAATGAGCTAGGAGTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CCA 90 bp TCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTGCAGTCTTTTAATGATGTGCCACATCTCTGGTaGTCCAGGAAGGCTTCACGT +
Preference number: 4 (lower is better)
Translates to: SGCDGLCARCGFVQSFNDVPHLW*SRKASR
Trigger: ACGTGAAGCCTTCCTGGACCACCAGAGATGTGGCAC...ATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp GAAAAGAGACCAATCATCCTGAAAGCCCGGTGCACTGTAAGTGCCACATCTCTGGAAGGTTTGAGAGGTTaGATAGCTGATCTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: EKRPIILKARCTVSATSLEGLRG*IADLLL
Trigger: TAGCAGGAGATCAGCTATCCAACCTCTCAAACCTTC...CAGAGATGTGGCACTTACAGTGCACCGGGCTTTCAGGATGATTGGTCTCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR CCA 90 bp ACTTGTACAGGGCCACTAGCTGCTCAGGTTTATATGCCTCCTGGGTCATTACGAGAAGGTTTGAGAGGTTaGATAGCTGATCTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: TCTGPLAAQVYMPPGSLREGLRG*IADLLL
Trigger: TAGCAGGAGATCAGCTATCCAACCTCTCAAACCTTC...TCGTAATGACCCAGGAGGCATATAAACCTGAGCAGCTAGTGGCCCTGTACAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp CTCTGGTGGTCCAGGAAGGCTTCACGTCCATTGACACATCTATGTTTTCTGTGGGAAGGTTTGAGAGGTTaGATAGCTGATCTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: LWWSRKASRPLTHLCFLWEGLRG*IADLLL
Trigger: TAGCAGGAGATCAGCTATCCAACCTCTCAAACCTTC...CCACAGAAAACATAGATGTGTCAATGGACGTGAAGCCTTCCTGGACCACCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR CCA 90 bp ACTTGTACAGGGCCACTAGCTGCTCAGGTTTATATGCCTCCTGGGTCATTACGAAAGTACAGAAGACTCTaGAATGGATACGCTAGGGTC +
Preference number: 4 (lower is better)
Translates to: TCTGPLAAQVYMPPGSLRKYRRL*NGYARV
Trigger: GACCCTAGCGTATCCATTCCAGAGTCTTCTGTACTT...TCGTAATGACCCAGGAGGCATATAAACCTGAGCAGCTAGTGGCCCTGTACAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp GCCAGCCAAGAATCCATGAGAAAAGAGACCAATCATCCTGAAAGCCCGGTGCACACCACAATCCATGGCTaGAGAATCTGTTCCTCAATT +
Preference number: 4 (lower is better)
Translates to: ASQESMRKETNHPESPVHTTIHG*RICSSI
Trigger: AATTGAGGAACAGATTCTCCAGCCATGGATTGTGGT...GTGCACCGGGCTTTCAGGATGATTGGTCTCTTTTCTCATGGATTCTTGGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286196.9
CDS-3UTR CCA 90 bp TGGGTGGAGGAAGTCTCCAATTCATTGGTCATCCTTCCAAAATTATGCTCCATTTTGACTTGGCACAGGTaGAAGAGCTCGTGGAGGACG +
Preference number: 4 (lower is better)
Translates to: WVEEVSNSLVILPKLCSILTWHR*KSSWRT
Trigger: CGTCCTCCACGAGCTCTTCCACCTGTGCCAAGTCAA...AATGGAGCATAATTTTGGAAGGATGACCAATGAATTGGAGACTTCCTCCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444047.6
CDS-3UTR CCA 90 bp CTGGTGGTCCAGGAAGGCTTCACGTCCATTGACACATCTATGTTTTCTGTGGTCAATATCATCTTGACTTaGCACAGGTGGAAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: LVVQEGFTSIDTSMFSVVNIILT*HRWKSS
Trigger: CGAGCTCTTCCACCTGTGCCAAGTCAAGATGATATT...GACCACAGAAAACATAGATGTGTCAATGGACGTGAAGCCTTCCTGGACCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CCA 90 bp AGAGATCTTTCCCAGTGCAGGACCCATCTCAAGAGGGGGATTTCCTGGAAAACCGGTTTATATGCCTCCTaGGTCATTACGAGATCTGAA +
Preference number: 4 (lower is better)
Translates to: RDLSQCRTHLKRGISWKTGLYAS*VITRSE
Trigger: TTCAGATCTCGTAATGACCCAGGAGGCATATAAACC...GGTTTTCCAGGAAATCCCCCTCTTGAGATGGGTCCTGCACTGGGAAAGATCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp GAAAAGAGACCAATCATCCTGAAAGCCCGGTGCACTGTAAGTGCCACATCTCTGAGGCTTCACGTCCATTaGCACATCTATGTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: EKRPIILKARCTVSATSLRLHVH*HIYVFC
Trigger: ACAGAAAACATAGATGTGTCAATGGACGTGAAGCCT...CAGAGATGTGGCACTTACAGTGCACCGGGCTTTCAGGATGATTGGTCTCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR TCA 90 bp ATACAAAGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTCGAGCATGGCTTCCCTaGAGTTTGCTGACGGGGAAG +
Preference number: 4 (lower is better)
Translates to: IQRQLCPWQLHIINVASFRAWLP*SLLTGK
Trigger: CTTCCCCGTCAGCAAACTTCAGGGAAGCCATGCTCG...AAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCTTTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp AGAGATCTTTCCCAGTGCAGGACCCATCTCAAGAGGGGGATTTCCTGGAAAACCACAAAAACTTGCACATaGATGTCCACAGCAGCATTA +
Preference number: 4 (lower is better)
Translates to: RDLSQCRTHLKRGISWKTTKTCT*MSTAAL
Trigger: TAATGCTGCTGTGGACATTCATGTGCAAGTTTTTGT...GGTTTTCCAGGAAATCCCCCTCTTGAGATGGGTCCTGCACTGGGAAAGATCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp CCTTCCTTTCTTGGCTCTAGGGGAGGATTTGTTTCCTTGCTCATTTGGGATACTTCAGACATCTGTGCATaGAAATCGTCCTTTCACGGC +
Preference number: 4 (lower is better)
Translates to: PSFLGSRGGFVSLLIWDTSDICA*KSSFHG
Trigger: GCCGTGAAAGGACGATTTTCATGCACAGATGTCTGA...AGTATCCCAAATGAGCAAGGAAACAAATCCTCCCCTAGAGCCAAGAAAGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp AGAAACCATGATGCCCTACCAATTGGACTGGATCAGCTTGCATGTCAATCTAGTATCCTGAAAGCCCGGTaGACTGTAAGTGCCACATCT +
Preference number: 4 (lower is better)
Translates to: RNHDALPIGLDQLACQSSILKAR*TVSATS
Trigger: AGATGTGGCACTTACAGTGCACCGGGCTTTCAGGAT...ACTAGATTGACATGCAAGCTGATCCAGTCCAATTGGTAGGGCATCATGGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCTATTCCCCTGAGCCTTaGCCTGCTCAGCCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: NDSPHYQTSVHENRPFTAYSPEP*PAQPLL
Trigger: CAAAAGAGGCTGAGCAGGGCAAGGCTCAGGGGAATA...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp CCTTCCTTTCTTGGCTCTAGGGGAGGATTTGTTTCCTTGCTCATTTGGGATACTCTGGAACTAGCAGGATaGCTTCAGAATTGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: PSFLGSRGGFVSLLIWDTLELAG*LQNCQQ
Trigger: TTGCTGGCAATTCTGAAGGCATCCTGCTAGTTCCAG...AGTATCCCAAATGAGCAAGGAAACAAATCCTCCCCTAGAGCCAAGAAAGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp GAACTCCTATACTGCCAGCTTATTGCCAGATTGAGAACCATTGCTGGTCACAGTCTGGAACTAGCAGGATaGCTTCAGAATTGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: ELLYCQLIARLRTIAGHSLELAG*LQNCQQ
Trigger: TTGCTGGCAATTCTGAAGGCATCCTGCTAGTTCCAG...ACTGTGACCAGCAATGGTTCTCAATCTGGCAATAAGCTGGCAGTATAGGAGTTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCGCACCCCATGAAACTTaGTGTCCAGCAGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: NDSPHYQTSVHENRPFTAAPHET*CPAAHS
Trigger: AGAGTGAGCTGCTGGACAGCAAGTTTCATGGGGTGC...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp GAGACCAATCATCCTGAAAGCCCGGTGCACTGTAAGTGCCACATCTCTGGTGGTGACTTTTCTAGTTCCTaGCCTTCTACTCCTATAATT +
Preference number: 4 (lower is better)
Translates to: ETNHPESPVHCKCHISGGDFSSS*PSTPII
Trigger: AATTATAGGAGTAGAAGGGCAGGAACTAGAAAAGTC...ACCACCAGAGATGTGGCACTTACAGTGCACCGGGCTTTCAGGATGATTGGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432684.6
CDS-3UTR CCA 90 bp GGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGACTGCTGTTCCACAGTAGTTATGACTTCTTTTGGGTaGAGGAAGTCTCCAATTCAA +
Preference number: 4 (lower is better)
Translates to: GWLMPVGAVNTDCCSTVVMTSFG*RKSPIQ
Trigger: TTGAATTGGAGACTTCCTCCACCCAAAAGAAGTCAT...AACTACTGTGGAACAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286196.9
CDS-3UTR CCA 90 bp GCTGATCTCCTGCTAGAACATATATCACAACAATATTCCACACAGCACAGCCAGAACTGCCTCCTCAGCTaGCTCCGCATCAATACCATT +
Preference number: 4 (lower is better)
Translates to: ADLLLEHISQQYSTQHSQNCLLS*LRINTI
Trigger: AATGGTATTGATGCGGAGCCAGCTGAGGAGGCAGTT...CTGGCTGTGCTGTGTGGAATATTGTTGTGATATATGTTCTAGCAGGAGATCAGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR CCA 90 bp AGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTCCCAAGAACTGCCTCCTCAGCTaGCTCCGCATCAATACCATT +
Preference number: 4 (lower is better)
Translates to: RQLCPWQLHIINVASFPKNCLLS*LRINTI
Trigger: AATGGTATTGATGCGGAGCCAGCTGAGGAGGCAGTT...CTTGGGAAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp AGAGATCTTTCCCAGTGCAGGACCCATCTCAAGAGGGGGATTTCCTGGAAAACCCTTAGGACGACTAAGTaGAATATCATCTTGACTTGG +
Preference number: 4 (lower is better)
Translates to: RDLSQCRTHLKRGISWKTLRTTK*NIILTW
Trigger: CCAAGTCAAGATGATATTCCACTTAGTCGTCCTAAG...GGTTTTCCAGGAAATCCCCCTCTTGAGATGGGTCCTGCACTGGGAAAGATCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp ATACAAAGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTGGTCATCACTCTCCTTaGCTCATGGCCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: IQRQLCPWQLHIINVASFGHHSP*LMAPSS
Trigger: GGAAGAGGGGGCCATGAGCCAAGGAGAGTGATGACC...AAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCTTTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CAA 72 bp CAGAGCTGCCTTCCTTTCTTGGCTCTAGGGGAGGATTaGTTTCCTTGCTCATTTGGGATACTCATAGAACTC +
Preference number: 4 (lower is better)
Translates to: QSCLPFLALGED*FPCSFGILIEL
Trigger: GAGTTCTATGAGTATCCCAAATGAGCAAGGAAACAAATCCTCCCCTAGAGCCAAGAAAGGAAGGCAGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp AGTGAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGTGATTATGTCTTCCTTCGACCAGCAGTCTaGGCAAGGCCTTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: SEYRLLFHSSLLISDYVFLRPAV*ARPSKE
Trigger: TTCTTTGGAAGGCCTTGCTCAGACTGCTGGTCGAAG...GAAGACATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR TCA 90 bp GAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGTGATTATGTCTTCATCCTTCGACCAGCAGTCTaGGCAAGGCCTTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: EYRLLFHSSLLISDYVFILRPAV*ARPSKE
Trigger: TTCTTTGGAAGGCCTTGCTCAGACTGCTGGTCGAAG...GATGAAGACATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR TCA 90 bp ATTCCACACAGCACAGCCAGCCAAGAATCCATGAGAAAAGAGACCAATCATCCTCCAGCCAAGAATCCATaGGAAAAGAGACCAATCATC +
Preference number: 4 (lower is better)
Translates to: IPHSTASQESMRKETNHPPAKNP*EKRPII
Trigger: GATGATTGGTCTCTTTTCTCATGGATTCTTGGCTGG...AGGATGATTGGTCTCTTTTCTCATGGATTCTTGGCTGGCTGTGCTGTGTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR TCA 90 bp TCCAGCCTTACAAACAGCAAAAGAGATTCCCAGTATAATGTTCACTCCAAATTTTCTCCTTTATTCCCCTaGGCCTTGCCCTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SSLTNSKRDSQYNVHSKFSPLFP*ALPCSA
Trigger: GGCTGAGCAGGGCAAGGCTCAGGGGAATAAAGGAGA...AAATTTGGAGTGAACATTATACTGGGAATCTCTTTTGCTGTTTGTAAGGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp CCTGATGTACAACCAGATATGAGAACCACTAGTACAGATTATAATGAGAAGCAATCTCCTTTATTCCCCTaGGCCTTGCCCTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PDVQPDMRTTSTDYNEKQSPLFP*ALPCSA
Trigger: GGCTGAGCAGGGCAAGGCTCAGGGGAATAAAGGAGA...TTGCTTCTCATTATAATCTGTACTAGTGGTTCTCATATCTGGTTGTACATCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCAATTACTGCACCCCATaGAACTTGCTGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NDSPHYQTSVHENRPFTANYCTP*NLLSSS
Trigger: GCTGCTGGACAGCAAGTTTCATGGGGTGCAGTAATT...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp CATCTATGTTTTCTGTGGTCTTTATCAACTCTGAACGATCAGCAGCCTGGAATCAGGTTTTTGAATAACTaGCTCCTCAGCTGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: HLCFLWSLSTLNDQQPGIRFLNN*LLSWLR
Trigger: GCGGAGCCAGCTGAGGAGGCAGTTATTCAAAAACCT...GATTCCAGGCTGCTGATCGTTCAGAGTTGATAAAGACCACAGAAAACATAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR GCA 90 bp TACAGGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGACTGCTGTTCCACAGTTGTTCCACAGTAGTTTaGTCATCAGTGATTATGTCT +
Preference number: 4 (lower is better)
Translates to: YRLANASGCSEYRLLFHSCSTVV*SSVIMS
Trigger: AGACATAATCACTGATGAGCAAACTACTGTGGAACA...ACTGTGGAACAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR GCA 90 bp TCACAACAATATTCCACACAGCACAGCCAGCCAAGAATCCATGAGAAAAGAGACCTGTTCCTCAATTCCTaGTTCCCAGAGGCTACCATT +
Preference number: 4 (lower is better)
Translates to: SQQYSTQHSQPRIHEKRDLFLNS*FPEATI
Trigger: AATGGTAGCCTCTGGGAAGCAGGAATTGAGGAACAG...GTCTCTTTTCTCATGGATTCTTGGCTGGCTGTGCTGTGTGGAATATTGTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286196.9
CDS-3UTR GCA 90 bp ACTTGTACAGGGCCACTAGCTGCTCAGGTTTATATGCCTCCTGGGTCATTACGAATAGCTTTCTATTGCTaGCATAAGCAATCACCACCA +
Preference number: 4 (lower is better)
Translates to: TCTGPLAAQVYMPPGSLRIAFYC*HKQSPP
Trigger: TGGTGGTGATTGCTTATGGCAGCAATAGAAAGCTAT...TCGTAATGACCCAGGAGGCATATAAACCTGAGCAGCTAGTGGCCCTGTACAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp AGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTCCCAAGCTGCTCAGGTTTATATaGCTCCTGGGTCATTACGAG +
Preference number: 4 (lower is better)
Translates to: RQLCPWQLHIINVASFPKLLRFI*LLGHYE
Trigger: CTCGTAATGACCCAGGAGGCATATAAACCTGAGCAG...CTTGGGAAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp CCTTCCTTTCTTGGCTCTAGGGGAGGATTTGTTTCCTTGCTCATTTGGGATACTTGTGAGATCATTCCCTaGTTCCTGGAGACATGCATT +
Preference number: 4 (lower is better)
Translates to: PSFLGSRGGFVSLLIWDTCEIIP*FLETCI
Trigger: AATGCATGTCTCCAGGAAGCAGGGAATGATCTCACA...AGTATCCCAAATGAGCAAGGAAACAAATCCTCCCCTAGAGCCAAGAAAGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp TTAATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCTGCACCTCACCTTGTaGTCCTCAGAGTACATGGCC +
Preference number: 4 (lower is better)
Translates to: LMIVLIIRHLCMKIVLSRLHLTL*SSEYMA
Trigger: GGCCATGTACTCTGAGGAGCACAAGGTGAGGTGCAG...CCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTTTAGGGGCAGGAACCTaGACCTCACCTTGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LISPYTYPKGRVNCYIQALGAGT*TSPCAP
Trigger: AGGAGCACAAGGTGAGGTGCAGGTTCCTGCCCCTAA...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp ACTTGTACAGGGCCACTAGCTGCTCAGGTTTATATGCCTCCTGGGTCATTACGATTCAGGAGTAGGCATTaGAATAAGAATACAAGTGCC +
Preference number: 4 (lower is better)
Translates to: TCTGPLAAQVYMPPGSLRFRSRH*NKNTSA
Trigger: GGCACTTGTATTCTTATTGCAATGCCTACTCCTGAA...TCGTAATGACCCAGGAGGCATATAAACCTGAGCAGCTAGTGGCCCTGTACAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp GAACTCCTATACTGCCAGCTTATTGCCAGATTGAGAACCATTGCTGGTCACAGTTTGAACAGGAGCCTCTaGGTGCTCTTTGAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: ELLYCQLIARLRTIAGHSLNRSL*VLFEFF
Trigger: AAAGAACTCAAAGAGCACCCAGAGGCTCCTGTTCAA...ACTGTGACCAGCAATGGTTCTCAATCTGGCAATAAGCTGGCAGTATAGGAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp CGTAATAAAGATGAACTAGATGACTTCTTTTGGGTGGAGGAAGTCTCCAATTCTGTGCCACATCTCTGGTaGTCCAGGAAGGCTTCACGT +
Preference number: 4 (lower is better)
Translates to: RNKDELDDFFWVEEVSNSVPHLW*SRKASR
Trigger: ACGTGAAGCCTTCCTGGACCACCAGAGATGTGGCAC...AGAATTGGAGACTTCCTCCACCCAAAAGAAGTCATCTAGTTCATCTTTATTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432684.6
CDS-3UTR CCA 90 bp GGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGACTGCTGTTCCACAGTAGTTAAATGGGACAAATACTaGGTCATTATTCCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: GWLMPVGAVNTDCCSTVVKWDKY*VIIPPK
Trigger: CTTTGGAGGAATAATGACCCAGTATTTGTCCCATTT...AACTACTGTGGAACAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286196.9
CDS-3UTR CCA 90 bp CCTTCCTTTCTTGGCTCTAGGGGAGGATTTGTTTCCTTGCTCATTTGGGATACTCCCTACCAATTGGACTaGATCAGCTTGCATGTCAAT +
Preference number: 4 (lower is better)
Translates to: PSFLGSRGGFVSLLIWDTPYQLD*ISLHVN
Trigger: ATTGACATGCAAGCTGATCCAGTCCAATTGGTAGGG...AGTATCCCAAATGAGCAAGGAAACAAATCCTCCCCTAGAGCCAAGAAAGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CAA 72 bp AATTATCCTTGGCTACAAGGATCAATAACAAGGATGTaGCCAGTTGGACATTGGACAGGGAGTTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: NYPWLQGSITRM*PVGHWTGSCWA
Trigger: TGCCCAGCAACTCCCTGTCCAATGTCCAACTGGCAACATCCTTGTTATTGATCCTTGTAGCCAAGGATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTCTTCGACCAGCAGTCTaGGCAAGGCCTTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: LISPYTYPKGRVNCYIQALRPAV*ARPSKE
Trigger: TTCTTTGGAAGGCCTTGCTCAGACTGCTGGTCGAAG...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp GCAGTGAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGTGATTATGTCTTTTTTCTGTCTTCTTTaGACAGGAGCCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: AVNTDCCSTVVCSSVIMSFFCLL*TGASGC
Trigger: GCACCCAGAGGCTCCTGTTCAAAGAAGACAGAAAAA...AGACATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTCACTGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR TCA 90 bp CCTTCCTTTCTTGGCTCTAGGGGAGGATTTGTTTCCTTGCTCATTTGGGATACTAAATTCACAATTCTGTaGCAGCAGGGAGAATCCCTT +
Preference number: 4 (lower is better)
Translates to: PSFLGSRGGFVSLLIWDTKFTIL*QQGESL
Trigger: AAGGGATTCTCCCTGCTGTCACAGAATTGTGAATTT...AGTATCCCAAATGAGCAAGGAAACAAATCCTCCCCTAGAGCCAAGAAAGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp AGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTCCCAAGAGCTTATTGCCAGATTaGGAACCATTGCTGGTCACA +
Preference number: 4 (lower is better)
Translates to: RQLCPWQLHIINVASFPKSLLPD*EPLLVT
Trigger: TGTGACCAGCAATGGTTCTCAATCTGGCAATAAGCT...CTTGGGAAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp GAACTCCTATACTGCCAGCTTATTGCCAGATTGAGAACCATTGCTGGTCACAGTAGTAATGAGAAACCATaGTGCCCTACCAATTGGACT +
Preference number: 4 (lower is better)
Translates to: ELLYCQLIARLRTIAGHSSNEKP*CPTNWT
Trigger: AGTCCAATTGGTAGGGCATCATGGTTTCTCATTACT...ACTGTGACCAGCAATGGTTCTCAATCTGGCAATAAGCTGGCAGTATAGGAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp ACTTGTACAGGGCCACTAGCTGCTCAGGTTTATATGCCTCCTGGGTCATTACGACTCTCTGAAAGAAAATaGTGTTTATTCAGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: TCTGPLAAQVYMPPGSLRLSERK*CLFRSR
Trigger: CCTACTCCTGAATAAACATCATTTTCTTTCAGAGAG...TCGTAATGACCCAGGAGGCATATAAACCTGAGCAGCTAGTGGCCCTGTACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp ATTATGTCTTCATCTTCTACTCCTAGCTCATTGGCATACTGTAATTCTGCTGGCAGGTTTTTGAATAACTaGCTCCTCAGCTGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: IMSSSSTPSSLAYCNSAGRFLNN*LLSWLR
Trigger: GCGGAGCCAGCTGAGGAGGCAGTTATTCAAAAACCT...GCCAGCAGAATTACAGTATGCCAATGAGCTAGGAGTAGAAGATGAAGACATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS-3UTR GCA 90 bp ACTTGTACAGGGCCACTAGCTGCTCAGGTTTATATGCCTCCTGGGTCATTACGATGTTCCACAGTAGTTTaGTCATCAGTGATTATGTCT +
Preference number: 4 (lower is better)
Translates to: TCTGPLAAQVYMPPGSLRCSTVV*SSVIMS
Trigger: AGACATAATCACTGATGAGCAAACTACTGTGGAACA...TCGTAATGACCCAGGAGGCATATAAACCTGAGCAGCTAGTGGCCCTGTACAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp AGAAACCATGATGCCCTACCAATTGGACTGGATCAGCTTGCATGTCAATCTAGTGCAGTGAATACAGACTaGTGTTCCACAGTAGTTTGC +
Preference number: 4 (lower is better)
Translates to: RNHDALPIGLDQLACQSSAVNTD*CSTVVC
Trigger: GCAAACTACTGTGGAACAGCAGTCTGTATTCACTGC...ACTAGATTGACATGCAAGCTGATCCAGTCCAATTGGTAGGGCATCATGGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp AACATATATCACAACAATATTCCACACAGCACAGCCAGCCAAGAATCCATGAGAATCCTGAAAGCCCGGTaGACTGTAAGTGCCACATCT +
Preference number: 4 (lower is better)
Translates to: NIYHNNIPHSTASQESMRILKAR*TVSATS
Trigger: AGATGTGGCACTTACAGTGCACCGGGCTTTCAGGAT...TCTCATGGATTCTTGGCTGGCTGTGCTGTGTGGAATATTGTTGTGATATATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR GCA 90 bp AGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTCCCAAGTCTATAACATTCAGGTaGTTGCTAATCAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RQLCPWQLHIINVASFPKSITFR*LLIRAG
Trigger: GCCTGCCCTGATTAGCAAGCACCTGAATGTTATAGA...CTTGGGAAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp CCTTCCTTTCTTGGCTCTAGGGGAGGATTTGTTTCCTTGCTCATTTGGGATACTATACTGCCAGCTTATTaGCAGATTGAGAACCATTGC +
Preference number: 4 (lower is better)
Translates to: PSFLGSRGGFVSLLIWDTILPAY*QIENHC
Trigger: GCAATGGTTCTCAATCTGGCAATAAGCTGGCAGTAT...AGTATCCCAAATGAGCAAGGAAACAAATCCTCCCCTAGAGCCAAGAAAGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCAGGTATCCACAGAGCTaGCTTCCTTTCTTGGCTCTA +
Preference number: 4 (lower is better)
Translates to: NDSPHYQTSVHENRPFTARYPQS*LPFLAL
Trigger: TAGAGCCAAGAAAGGAAGGCAGCTCTGTGGATACCT...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp ACTTGTACAGGGCCACTAGCTGCTCAGGTTTATATGCCTCCTGGGTCATTACGAATACAAAGGCAACTATaGCCATGGCAGTTACATATT +
Preference number: 4 (lower is better)
Translates to: TCTGPLAAQVYMPPGSLRIQRQL*PWQLHI
Trigger: AATATGTAACTGCCATGGGCATAGTTGCCTTTGTAT...TCGTAATGACCCAGGAGGCATATAAACCTGAGCAGCTAGTGGCCCTGTACAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCATCTACCCAGTGCAGTaGTTCACCAGGATGGCAATA +
Preference number: 4 (lower is better)
Translates to: NDSPHYQTSVHENRPFTAIYPVQ*FTRMAI
Trigger: TATTGCCATCCTGGTGAAGCACTGCACTGGGTAGAT...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp TCCAGCCTTACAAACAGCAAAAGAGATTCCCAGTATAATGTTCACTCCAAATTTCTGCACCTCACCTTGTaGTCCTCAGAGTACATGGCC +
Preference number: 4 (lower is better)
Translates to: SSLTNSKRDSQYNVHSKFLHLTL*SSEYMA
Trigger: GGCCATGTACTCTGAGGAGCACAAGGTGAGGTGCAG...AAATTTGGAGTGAACATTATACTGGGAATCTCTTTTGCTGTTTGTAAGGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp TCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTGCAGTCTTTTAATGATCATTGGACAGGGAGTTaGTGGGCAAATGTCCTCATA +
Preference number: 4 (lower is better)
Translates to: SGCDGLCARCGFVQSFNDHWTGS*WANVLI
Trigger: TATGAGGACATTTGCCCAGCAACTCCCTGTCCAATG...ATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp CTTCTACTCCTAGCTCATTGGCATACTGTAATTCTGCTGGCTGGGTTTTCTTTGTTGAACAGGAGCCTCTaGGTGCTCTTTGAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: LLLLAHWHTVILLAGFSLLNRSL*VLFEFF
Trigger: AAAGAACTCAAAGAGCACCCAGAGGCTCCTGTTCAA...CAAAGAAAACCCAGCCAGCAGAATTACAGTATGCCAATGAGCTAGGAGTAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CCA 90 bp GAGGGAGACTCTCTGAAAGAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAACTTTGCCTACAGGCTaGCTAATGCCAGTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: EGDSLKENDVYSGVGIAITLPTG*LMPVGA
Trigger: TGCACCCACTGGCATTAGCCAGCCTGTAGGCAAAGT...TATTGCAATGCCTACTCCTGAATAAACATCATTTTCTTTCAGAGAGTCTCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp AGGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGACTGCTGTTCCACAGTAGTCATCTATGTTTTCTGTaGTCTTTATCAACTCTGAAC +
Preference number: 4 (lower is better)
Translates to: RLANASGCSEYRLLFHSSHLCFL*SLSTLN
Trigger: GTTCAGAGTTGATAAAGACCACAGAAAACATAGATG...ACTACTGTGGAACAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CCA 90 bp CTATGTTTTCTGTGGTCTTTATCAACTCTGAACGATCAGCAGCCTGGAATCTCCAAGTACAGAAGACTCTaGAATGGATACGCTAGGGTC +
Preference number: 4 (lower is better)
Translates to: LCFLWSLSTLNDQQPGISKYRRL*NGYARV
Trigger: GACCCTAGCGTATCCATTCCAGAGTCTTCTGTACTT...GGAGATTCCAGGCTGCTGATCGTTCAGAGTTGATAAAGACCACAGAAAACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286196.9
CDS-3UTR CCA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGTTGACTTGGCACAGGTaGAAGAGCTCGTGGAGGACG +
Preference number: 4 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQLTWHR*KSSWRT
Trigger: CGTCCTCCACGAGCTCTTCCACCTGTGCCAAGTCAA...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp GAGGGAGACTCTCTGAAAGAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAACTGCAGATGTCAACTaGGAGCCCACAAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: EGDSLKENDVYSGVGIAITADVN*EPTSSQ
Trigger: CTGTGAGCTTGTGGGCTCCCAGTTGACATCTGCAGT...TATTGCAATGCCTACTCCTGAATAAACATCATTTTCTTTCAGAGAGTCTCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp CCTTCCTTTCTTGGCTCTAGGGGAGGATTTGTTTCCTTGCTCATTTGGGATACTCCAGGGATTAGGACATaGACATCTTTAGGAGACATT +
Preference number: 4 (lower is better)
Translates to: PSFLGSRGGFVSLLIWDTPGIRT*TSLGDI
Trigger: AATGTCTCCTAAAGATGTCCATGTCCTAATCCCTGG...AGTATCCCAAATGAGCAAGGAAACAAATCCTCCCCTAGAGCCAAGAAAGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGGCTCCTCAGAGTACATaGCCCAATATCCCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQAPQST*PNIPRP
Trigger: GGGCCTTGGGATATTGGGCCATGTACTCTGAGGAGC...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp TGCTGGCTGGGTTTTCTTTGTCTTCCTCCGAGGTTTTTGAATAACTGCCTCCTCATGACTTCTTTTGGGTaGAGGAAGTCTCCAATTCAT +
Preference number: 4 (lower is better)
Translates to: CWLGFLCLPPRFLNNCLLMTSFG*RKSPIH
Trigger: ATGAATTGGAGACTTCCTCCACCCAAAAGAAGTCAT...GAGGAGGCAGTTATTCAAAAACCTCGGAGGAAGACAAAGAAAACCCAGCCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444047.6
3UTR CAA 72 bp ATGGATACGCTAGGGTCTTGTATTGTTGCAGAAGGTTaGAGAGGTTGGATAGCTGATCTCCTGCTAGAACAT +
Preference number: 4 (lower is better)
Translates to: MDTLGSCIVAEG*RGWIADLLLEH
Trigger: ATGTTCTAGCAGGAGATCAGCTATCCAACCTCTCAAACCTTCTGCAACAATACAAGACCCTAGCGTATCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286196.9
3UTR CAA 72 bp AAGTACAGAAGACTCTGGAATGGATACGCTAGGGTCTaGTATTGTTGCAGAAGGTTTGAGAGGTTGGATAGC +
Preference number: 4 (lower is better)
Translates to: KYRRLWNGYARV*YCCRRFERLDS
Trigger: GCTATCCAACCTCTCAAACCTTCTGCAACAATACAAGACCCTAGCGTATCCATTCCAGAGTCTTCTGTACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286196.9
3UTR CAA 72 bp CCTTCCTTTCTTGGCTCTAGGGGAGGATTTGTTTCCTaGCTCATTTGGGATACTCATAGAACTCAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: PSFLGSRGGFVS*LIWDTHRTQFL
Trigger: AAGGAACTGAGTTCTATGAGTATCCCAAATGAGCAAGGAAACAAATCCTCCCCTAGAGCCAAGAAAGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CAA 72 bp GGGTGCAGTGAATACAGACTGCTGTTCCACAGTAGTTaGCTCATCAGTGATTATGTCTTCATCTTCTACTCC +
Preference number: 4 (lower is better)
Translates to: GCSEYRLLFHSS*LISDYVFIFYS
Trigger: GGAGTAGAAGATGAAGACATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTCACTGCACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS-3UTR TCA 90 bp GGTGCAGTGAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGTGATTATGTTTGAGTTCTTTAGTTaGTGGCTCATTGCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: GAVNTDCCSTVVCSSVIMFEFFS*WLIALR
Trigger: TCTGAGGGCAATGAGCCATCAACTAAAGAACTCAAA...CATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTCACTGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR TCA 90 bp AGTGAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGTGATTATGTCTTCTTCCTCCGAGGTTTTTaGATAACTGCCTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SEYRLLFHSSLLISDYVFFLRGF*ITASSA
Trigger: AGCTGAGGAGGCAGTTATTCAAAAACCTCGGAGGAA...GAAGACATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR TCA 90 bp ATAGCTGATCTCCTGCTAGAACATATATCACAACAATATTCCACACAGCACAGCGGTCTTTATCAACTCTaGACGATCAGCAGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: IADLLLEHISQQYSTQHSGLYQL*TISSLE
Trigger: TTCCAGGCTGCTGATCGTTCAGAGTTGATAAAGACC...GCTGTGCTGTGTGGAATATTGTTGTGATATATGTTCTAGCAGGAGATCAGCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR TCA 90 bp GCAGTGAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGTGATTATGTCTGAGAGGTTGGATAGCTaGTCTCCTGCTAGAACATAT +
Preference number: 4 (lower is better)
Translates to: AVNTDCCSTVVCSSVIMSERLDS*SPARTY
Trigger: ATATGTTCTAGCAGGAGATCAGCTATCCAACCTCTC...AGACATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTCACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR TCA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCGAGAGGTTGGATAGCTaGTCTCCTGCTAGAACATAT +
Preference number: 4 (lower is better)
Translates to: NDSPHYQTSVHENRPFTAERLDS*SPARTY
Trigger: ATATGTTCTAGCAGGAGATCAGCTATCCAACCTCTC...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp CACAAATACTTTGCCTACAGGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGATCACTTGTCATTTGCTaGCTCAGAGATAGTATAAGA +
Preference number: 4 (lower is better)
Translates to: HKYFAYRLANASGCSEYRSLVIC*LRDSIR
Trigger: TCTTATACTATCTCTGAGTCAGCAAATGACAAGTGA...TCTGTATTCACTGCACCCACTGGCATTAGCCAGCCTGTAGGCAAAGTATTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286196.9
CDS-3UTR TCA 90 bp AGAAGACTCTGGAATGGATACGCTAGGGTCTTGTATTGTTGCAGAAGGTTTGAGTTATTCCTCCAAAGGTaGGCTGGTATTATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: RRLWNGYARVLYCCRRFELFLQR*AGIMKR
Trigger: CCTCTTCATAATACCAGCTCACCTTTGGAGGAATAA...CTCAAACCTTCTGCAACAATACAAGACCCTAGCGTATCCATTCCAGAGTCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286196.9
CDS-3UTR TCA 90 bp TTAATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCATTGCTGGTCACAGTaGAAGCTGGAACTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LMIVLIIRHLCMKIVLSRHCWSQ*KLELAG
Trigger: TCCTGCTAGTTCCAGCTTTCACTGTGACCAGCAATG...CCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp AGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTCCCAAGGGTCATTACGAGATCTaGAGTCTAAGTTGTACTTCC +
Preference number: 4 (lower is better)
Translates to: RQLCPWQLHIINVASFPKGHYEI*SLSCTS
Trigger: GGAAGTACAACTTAGACTTCAGATCTCGTAATGACC...CTTGGGAAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp CATCTATGTTTTCTGTGGTCTTTATCAACTCTGAACGATCAGCAGCCTGGAATCACAGGAGCCTCTGGGTaGTCTTTGAGTTCTTTAGTT +
Preference number: 4 (lower is better)
Translates to: HLCFLWSLSTLNDQQPGITGASG*SLSSLV
Trigger: AACTAAAGAACTCAAAGAGCACCCAGAGGCTCCTGT...GATTCCAGGCTGCTGATCGTTCAGAGTTGATAAAGACCACAGAAAACATAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR GCA 90 bp ATACAAAGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTAGGTTTTTGAATAACTaGCTCCTCAGCTGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: IQRQLCPWQLHIINVASFRFLNN*LLSWLR
Trigger: GCGGAGCCAGCTGAGGAGGCAGTTATTCAAAAACCT...AAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCTTTGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTATCCTGAAAGCCCGGTaGACTGTAAGTGCCACATCT +
Preference number: 4 (lower is better)
Translates to: LISPYTYPKGRVNCYIQAILKAR*TVSATS
Trigger: AGATGTGGCACTTACAGTGCACCGGGCTTTCAGGAT...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp ATAATGTTCACTCCAAATTTAGACCTATTGTCAGGGTCAACTGTCTCTATCATCTATTCCCCTGAGCCTTaGCCTGCTCAGCCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: IMFTPNLDLLSGSTVSIIYSPEP*PAQPLL
Trigger: CAAAAGAGGCTGAGCAGGGCAAGGCTCAGGGGAATA...GATGATAGAGACAGTTGACCCTGACAATAGGTCTAAATTTGGAGTGAACATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGCAGAGGAAAGGGTACTaGAGATGTCAACTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQQRKGY*RCQLGA
Trigger: GGCTCCCAGTTGACATCTGCAGTACCCTTTCCTCTG...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp CCTGATGTACAACCAGATATGAGAACCACTAGTACAGATTATAATGAGAAGCAACAGAGGAAAGGGTACTaGAGATGTCAACTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PDVQPDMRTTSTDYNEKQQRKGY*RCQLGA
Trigger: GGCTCCCAGTTGACATCTGCAGTACCCTTTCCTCTG...TTGCTTCTCATTATAATCTGTACTAGTGGTTCTCATATCTGGTTGTACATCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCTCTATAACATTCAGGTaGTTGCTAATCAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: NDSPHYQTSVHENRPFTASITFR*LLIRAG
Trigger: GCCTGCCCTGATTAGCAAGCACCTGAATGTTATAGA...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp AATGTCCCCGTTTTAAGGTTCATAACCTTAATCATATCTGCAAATCCCTTTGGCTACAGGGCCACTAGCTaGTCAGGTTTATATGCCTCC +
Preference number: 4 (lower is better)
Translates to: NVPVLRFITLIISANPFGYRATS*SGLYAS
Trigger: GGAGGCATATAAACCTGAGCAGCTAGTGGCCCTGTA...GCCAAAGGGATTTGCAGATATGATTAAGGTTATGAACCTTAAAACGGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp ATAATGTTCACTCCAAATTTAGACCTATTGTCAGGGTCAACTGTCTCTATCATCACGGCCTCAGCAATGTaGCTCAAGTGTCACTGTGAG +
Preference number: 4 (lower is better)
Translates to: IMFTPNLDLLSGSTVSIITASAM*LKCHCE
Trigger: CTCACAGTGACACTTGAGGCACATTGCTGAGGCCGT...GATGATAGAGACAGTTGACCCTGACAATAGGTCTAAATTTGGAGTGAACATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp GTACTTCCCAGACCTGGAAGAATACAAAGGCAACTATGCCCATGGCAGTTACATTTCAGGAGTAGGCATTaGAATAAGAATACAAGTGCC +
Preference number: 4 (lower is better)
Translates to: VLPRPGRIQRQLCPWQLHFRSRH*NKNTSA
Trigger: GGCACTTGTATTCTTATTGCAATGCCTACTCCTGAA...ATGTAACTGCCATGGGCATAGTTGCCTTTGTATTCTTCCAGGTCTGGGAAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp GCAAAGTCAATCCTGTCAAAAGCTGAAATTGTACTCAGAGCCAAAAGCAAGTACAGTGGAATATCATCTTaGCACAGGTGGAAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: AKSILSKAEIVLRAKSKYSGISS*HRWKSS
Trigger: CGAGCTCTTCCACCTGTGCCAAGATGATATTCCACT...GTACTTGCTTTTGGCTCTGAGTACAATTTCAGCTTTTGACAGGATTGACTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286196.9
CDS-3UTR CCA 90 bp CCTGATGTACAACCAGATATGAGAACCACTAGTACAGATTATAATGAGAAGCAAATCACAGCTTTCCCGTaGTTTCCTAAGTGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: PDVQPDMRTTSTDYNEKQITAFP*FPKWWR
Trigger: CCGCCACCACTTAGGAAACCACGGGAAAGCTGTGAT...TTGCTTCTCATTATAATCTGTACTAGTGGTTCTCATATCTGGTTGTACATCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409444.6
CDS-3UTR CCA 90 bp TCCAGCCTTACAAACAGCAAAAGAGATTCCCAGTATAATGTTCACTCCAAATTTGAAATCTGGCGACCGTaGCGCTGCAATCACAGCTTT +
Preference number: 4 (lower is better)
Translates to: SSLTNSKRDSQYNVHSKFEIWRP*RCNHSF
Trigger: AAAGCTGTGATTGCAGCGCCACGGTCGCCAGATTTC...AAATTTGGAGTGAACATTATACTGGGAATCTCTTTTGCTGTTTGTAAGGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409444.6
CDS-3UTR CCA 90 bp TCCAGCCTTACAAACAGCAAAAGAGATTCCCAGTATAATGTTCACTCCAAATTTAGGTGGAAGAGCTCGTaGAGGACGCACAGGATTCTT +
Preference number: 4 (lower is better)
Translates to: SSLTNSKRDSQYNVHSKFRWKSS*RTHRIL
Trigger: AAGAATCCTGTGCGTCCTCCACGAGCTCTTCCACCT...AAATTTGGAGTGAACATTATACTGGGAATCTCTTTTGCTGTTTGTAAGGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409444.6
CDS-3UTR CCA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGACTGCAGATGTCAACTaGGAGCCCACAAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQTADVN*EPTSSQ
Trigger: CTGTGAGCTTGTGGGCTCCCAGTTGACATCTGCAGT...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp AGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTCCCAAGATCCAAGCTACTTCTTaGCATATCCTTGTCAGCCTA +
Preference number: 4 (lower is better)
Translates to: RQLCPWQLHIINVASFPKIQATS*HILVSL
Trigger: TAGGCTGACAAGGATATGCCAAGAAGTAGCTTGGAT...CTTGGGAAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CAA 72 bp AGCTTTAGGGTCTCATATACAACAGCTGAGGTACCATaGGATATAGTTCTGAAGAGATCTTTCCCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: SFRVSYTTAEVP*DIVLKRSFPVQ
Trigger: CTGCACTGGGAAAGATCTCTTCAGAACTATATCCAATGGTACCTCAGCTGTTGTATATGAGACCCTAAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp ATACAAAGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTTTTTTCTGTCTTCTTTaGACAGGAGCCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: IQRQLCPWQLHIINVASFFFCLL*TGASGC
Trigger: GCACCCAGAGGCTCCTGTTCAAAGAAGACAGAAAAA...AAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCTTTGTAT
42% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTTTTTTCTGTCTTCTTTaGACAGGAGCCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LISPYTYPKGRVNCYIQAFFCLL*TGASGC
Trigger: GCACCCAGAGGCTCCTGTTCAAAGAAGACAGAAAAA...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp TTAATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGGGTCTTTATCAACTCTaGACGATCAGCAGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LMIVLIIRHLCMKIVLSRGLYQL*TISSLE
Trigger: TTCCAGGCTGCTGATCGTTCAGAGTTGATAAAGACC...CCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp TCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGGCTTCACGTCCATTaGCACATCTATGTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: SGCDGLCARCGFVQSFNDRLHVH*HIYVFC
Trigger: ACAGAAAACATAGATGTGTCAATGGACGTGAAGCCT...ATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp ACATCTATGTTTTCTGTGGTCTTTATCAACTCTGAACGATCAGCAGCCTGGAATCCAGCCAAGAATCCATaGGAAAAGAGACCAATCATC +
Preference number: 4 (lower is better)
Translates to: TSMFSVVFINSERSAAWNPAKNP*EKRPII
Trigger: GATGATTGGTCTCTTTTCTCATGGATTCTTGGCTGG...ATTCCAGGCTGCTGATCGTTCAGAGTTGATAAAGACCACAGAAAACATAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR TCA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCTTATTCCTCCAAAGGTaGGCTGGTATTATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: NDSPHYQTSVHENRPFTALFLQR*AGIMKR
Trigger: CCTCTTCATAATACCAGCTCACCTTTGGAGGAATAA...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCGGTCATTACGAGATCTaGAGTCTAAGTTGTACTTCC +
Preference number: 4 (lower is better)
Translates to: NDSPHYQTSVHENRPFTAGHYEI*SLSCTS
Trigger: GGAAGTACAACTTAGACTTCAGATCTCGTAATGACC...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp AGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTCCCAAGCAGTCAAACAATTTTTaGGACACACCAGAAACACCA +
Preference number: 4 (lower is better)
Translates to: RQLCPWQLHIINVASFPKQSNNF*DTPETP
Trigger: TGGTGTTTCTGGTGTGTCTCAAAAATTGTTTGACTG...CTTGGGAAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp AATGTCCCCGTTTTAAGGTTCATAACCTTAATCATATCTGCAAATCCCTTTGGCCTGGAGAAAGTTACATaGATTCTCATCGACGGCCTC +
Preference number: 4 (lower is better)
Translates to: NVPVLRFITLIISANPFGLEKVT*ILIDGL
Trigger: GAGGCCGTCGATGAGAATTCATGTAACTTTCTCCAG...GCCAAAGGGATTTGCAGATATGATTAAGGTTATGAACCTTAAAACGGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp TTAATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCTGGAGAAAGTTACATaGATTCTCATCGACGGCCTC +
Preference number: 4 (lower is better)
Translates to: LMIVLIIRHLCMKIVLSRLEKVT*ILIDGL
Trigger: GAGGCCGTCGATGAGAATTCATGTAACTTTCTCCAG...CCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp GTACTTCCCAGACCTGGAAGAATACAAAGGCAACTATGCCCATGGCAGTTACATAAGGAAATGAACTATTaGTACACACAACAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: VLPRPGRIQRQLCPWQLHKEMNY*YTQQLR
Trigger: TCTCAGCTGTTGTGTGTATCAATAGTTCATTTCCTT...ATGTAACTGCCATGGGCATAGTTGCCTTTGTATTCTTCCAGGTCTGGGAAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp AATGTCCCCGTTTTAAGGTTCATAACCTTAATCATATCTGCAAATCCCTTTGGCTCAGACATCTGTGCATaGAAATCGTCCTTTCACGGC +
Preference number: 4 (lower is better)
Translates to: NVPVLRFITLIISANPFGSDICA*KSSFHG
Trigger: GCCGTGAAAGGACGATTTTCATGCACAGATGTCTGA...GCCAAAGGGATTTGCAGATATGATTAAGGTTATGAACCTTAAAACGGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGAGGTTTTTGAATAACTaGCTCCTCAGCTGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQRFLNN*LLSWLR
Trigger: GCGGAGCCAGCTGAGGAGGCAGTTATTCAAAAACCT...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp ACATCTATGTTTTCTGTGGTCTTTATCAACTCTGAACGATCAGCAGCCTGGAATGCAGTGAATACAGACTaGTGTTCCACAGTAGTTTGC +
Preference number: 4 (lower is better)
Translates to: TSMFSVVFINSERSAAWNAVNTD*CSTVVC
Trigger: GCAAACTACTGTGGAACAGCAGTCTGTATTCACTGC...ATTCCAGGCTGCTGATCGTTCAGAGTTGATAAAGACCACAGAAAACATAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR GCA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGCTGTTCCTCAATTCCTaGTTCCCAGAGGCTACCATT +
Preference number: 4 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLLFLNS*FPEATI
Trigger: AATGGTAGCCTCTGGGAAGCAGGAATTGAGGAACAG...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp ATAATGTTCACTCCAAATTTAGACCTATTGTCAGGGTCAACTGTCTCTATCATCAGAGATCTTTCCCAGTaGAGGACCCATCTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: IMFTPNLDLLSGSTVSIIRDLSQ*RTHLKR
Trigger: CCTCTTGAGATGGGTCCTGCACTGGGAAAGATCTCT...GATGATAGAGACAGTTGACCCTGACAATAGGTCTAAATTTGGAGTGAACATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp TCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTGCAGTCTTTTAATGATTGCTTCCTGGAGACATaGATTAGCAGTGAACTTCTT +
Preference number: 4 (lower is better)
Translates to: SGCDGLCARCGFVQSFNDCFLET*ISSELL
Trigger: AAGAAGTTCACTGCTAATGCATGTCTCCAGGAAGCA...ATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp ATAATGTTCACTCCAAATTTAGACCTATTGTCAGGGTCAACTGTCTCTATCATCGTGTTATCTACCCAGTaGAGTGCTTCACCAGGATGG +
Preference number: 4 (lower is better)
Translates to: IMFTPNLDLLSGSTVSIIVLSTQ*SASPGW
Trigger: CCATCCTGGTGAAGCACTGCACTGGGTAGATAACAC...GATGATAGAGACAGTTGACCCTGACAATAGGTCTAAATTTGGAGTGAACATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp GAACTCCTATACTGCCAGCTTATTGCCAGATTGAGAACCATTGCTGGTCACAGTCAAGGTGTGGTTTTGTaGAGTCTTTTAATGATAGTC +
Preference number: 4 (lower is better)
Translates to: ELLYCQLIARLRTIAGHSQGVVL*SLLMIV
Trigger: GACTATCATTAAAAGACTGCACAAAACCACACCTTG...ACTGTGACCAGCAATGGTTCTCAATCTGGCAATAAGCTGGCAGTATAGGAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGCATTGGACAGGGAGTTaGTGGGCAAATGTCCTCATA +
Preference number: 4 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLHWTGS*WANVLI
Trigger: TATGAGGACATTTGCCCAGCAACTCCCTGTCCAATG...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp ATTATGTCTTCATCTTCTACTCCTAGCTCATTGGCATACTGTAATTCTGCTGGCTTGAACAGGAGCCTCTaGGTGCTCTTTGAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: IMSSSSTPSSLAYCNSAGLNRSL*VLFEFF
Trigger: AAAGAACTCAAAGAGCACCCAGAGGCTCCTGTTCAA...GCCAGCAGAATTACAGTATGCCAATGAGCTAGGAGTAGAAGATGAAGACATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CCA 90 bp TCTTCTACTCCTAGCTCATTGGCATACTGTAATTCTGCTGGCTGGGTTTTCTTTCTAGATGACTTCTTTTaGGTGGAGGAAGTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: SSTPSSLAYCNSAGWVFFLDDFF*VEEVSN
Trigger: ATTGGAGACTTCCTCCACCCAAAAGAAGTCATCTAG...AAAGAAAACCCAGCCAGCAGAATTACAGTATGCCAATGAGCTAGGAGTAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CCA 90 bp TGCAGTGAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGTGATTATGTCCTACTCCTAGCTCATTaGCATACTGTAATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: CSEYRLLFHSSLLISDYVLLLAH*HTVILL
Trigger: CAGCAGAATTACAGTATGCCAATGAGCTAGGAGTAG...GACATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTCACTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CCA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCACCACAATCCATGGCTaGAGAATCTGTTCCTCAATT +
Preference number: 4 (lower is better)
Translates to: NDSPHYQTSVHENRPFTATTIHG*RICSSI
Trigger: AATTGAGGAACAGATTCTCCAGCCATGGATTGTGGT...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp ATACAAAGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTGTCAAAAGTATGACATaGGCAGCACCAGGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: IQRQLCPWQLHIINVASFVKSMT*AAPGQN
Trigger: GTTTTGGCCTGGTGCTGCCCATGTCATACTTTTGAC...AAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCTTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp CTATGTTTTCTGTGGTCTTTATCAACTCTGAACGATCAGCAGCCTGGAATCTCCATGACTTCTTTTGGGTaGAGGAAGTCTCCAATTCTT +
Preference number: 4 (lower is better)
Translates to: LCFLWSLSTLNDQQPGISMTSFG*RKSPIL
Trigger: AAGAATTGGAGACTTCCTCCACCCAAAAGAAGTCAT...GGAGATTCCAGGCTGCTGATCGTTCAGAGTTGATAAAGACCACAGAAAACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432684.6
3UTR CAA 72 bp TGTCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTaGTGCAGTCTTTTAATGATAGTCCTCATTATCAGA +
Preference number: 4 (lower is better)
Translates to: CQVVMAFVQGVV*CSLLMIVLIIR
Trigger: TCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp ATTATGTCTTCATCTTCTACTCCTAGCTCATTGGCATACTGTAATTCTGCTGGCTTTGAGTTCTTTAGTTaGTGGCTCATTGCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: IMSSSSTPSSLAYCNSAGFEFFS*WLIALR
Trigger: TCTGAGGGCAATGAGCCATCAACTAAAGAACTCAAA...GCCAGCAGAATTACAGTATGCCAATGAGCTAGGAGTAGAAGATGAAGACATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS-3UTR TCA 90 bp TCCAGCCTTACAAACAGCAAAAGAGATTCCCAGTATAATGTTCACTCCAAATTTTTCCTCCGAGGTTTTTaGATAACTGCCTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SSLTNSKRDSQYNVHSKFFLRGF*ITASSA
Trigger: AGCTGAGGAGGCAGTTATTCAAAAACCTCGGAGGAA...AAATTTGGAGTGAACATTATACTGGGAATCTCTTTTGCTGTTTGTAAGGCTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp TTCAGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTGCTGTTTCCTCCGAGGTTTTTaGATAACTGCCTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FRFILCGVLITAPHETCCFLRGF*ITASSA
Trigger: AGCTGAGGAGGCAGTTATTCAAAAACCTCGGAGGAA...ACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp ATAATGTTCACTCCAAATTTAGACCTATTGTCAGGGTCAACTGTCTCTATCATCGGTCTTTATCAACTCTaGACGATCAGCAGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: IMFTPNLDLLSGSTVSIIGLYQL*TISSLE
Trigger: TTCCAGGCTGCTGATCGTTCAGAGTTGATAAAGACC...GATGATAGAGACAGTTGACCCTGACAATAGGTCTAAATTTGGAGTGAACATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp ACATCTATGTTTTCTGTGGTCTTTATCAACTCTGAACGATCAGCAGCCTGGAATAGGCTTCACGTCCATTaGCACATCTATGTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: TSMFSVVFINSERSAAWNRLHVH*HIYVFC
Trigger: ACAGAAAACATAGATGTGTCAATGGACGTGAAGCCT...ATTCCAGGCTGCTGATCGTTCAGAGTTGATAAAGACCACAGAAAACATAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR TCA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGCCAGCCAAGAATCCATaGGAAAAGAGACCAATCATC +
Preference number: 4 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLPAKNP*EKRPII
Trigger: GATGATTGGTCTCTTTTCTCATGGATTCTTGGCTGG...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTAGTGGAATATCATCTTaGCTTGGCACAGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LISPYTYPKGRVNCYIQASGISS*LGTGGR
Trigger: TCTTCCACCTGTGCCAAGTCAAGATGATATTCCACT...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp TTGAGAGGTTGGATAGCTGATCTCCTGCTAGAACATATATCACAACAATATTCCAGTGGAATATCATCTTaGCTTGGCACAGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LRGWIADLLLEHISQQYSSGISS*LGTGGR
Trigger: TCTTCCACCTGTGCCAAGTCAAGATGATATTCCACT...GGAATATTGTTGTGATATATGTTCTAGCAGGAGATCAGCTATCCAACCTCTCAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432684.6
CDS-3UTR TCA 90 bp AGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTCCCAAGAAGGAAATGAACTATTaGTACACACAACAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: RQLCPWQLHIINVASFPKKEMNY*YTQQLR
Trigger: TCTCAGCTGTTGTGTGTATCAATAGTTCATTTCCTT...CTTGGGAAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCACAAAAACTTGCACATaGATGTCCACAGCAGCATTA +
Preference number: 4 (lower is better)
Translates to: NDSPHYQTSVHENRPFTATKTCT*MSTAAL
Trigger: TAATGCTGCTGTGGACATTCATGTGCAAGTTTTTGT...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp AGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTCCCAAGCTCTCTGAAAGAAAATaGTGTTTATTCAGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: RQLCPWQLHIINVASFPKLSERK*CLFRSR
Trigger: CCTACTCCTGAATAAACATCATTTTCTTTCAGAGAG...CTTGGGAAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp TTAATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGACAGGAGCCTCTGGGTaGTCTTTGAGTTCTTTAGTT +
Preference number: 4 (lower is better)
Translates to: LMIVLIIRHLCMKIVLSRTGASG*SLSSLV
Trigger: AACTAAAGAACTCAAAGAGCACCCAGAGGCTCCTGT...CCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp AATGTCCCCGTTTTAAGGTTCATAACCTTAATCATATCTGCAAATCCCTTTGGCGCAGTGAATACAGACTaGTGTTCCACAGTAGTTTGC +
Preference number: 4 (lower is better)
Translates to: NVPVLRFITLIISANPFGAVNTD*CSTVVC
Trigger: GCAAACTACTGTGGAACAGCAGTCTGTATTCACTGC...GCCAAAGGGATTTGCAGATATGATTAAGGTTATGAACCTTAAAACGGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGCTGTTCCTCAATTCCTaGTTCCCAGAGGCTACCATT +
Preference number: 4 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQLFLNS*FPEATI
Trigger: AATGGTAGCCTCTGGGAAGCAGGAATTGAGGAACAG...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp CCTGATGTACAACCAGATATGAGAACCACTAGTACAGATTATAATGAGAAGCAACTGCTCAGGTTTATATaGCTCCTGGGTCATTACGAG +
Preference number: 4 (lower is better)
Translates to: PDVQPDMRTTSTDYNEKQLLRFI*LLGHYE
Trigger: CTCGTAATGACCCAGGAGGCATATAAACCTGAGCAG...TTGCTTCTCATTATAATCTGTACTAGTGGTTCTCATATCTGGTTGTACATCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp TCCAGCCTTACAAACAGCAAAAGAGATTCCCAGTATAATGTTCACTCCAAATTTATCTACCCAGTGCAGTaGTTCACCAGGATGGCAATA +
Preference number: 4 (lower is better)
Translates to: SSLTNSKRDSQYNVHSKFIYPVQ*FTRMAI
Trigger: TATTGCCATCCTGGTGAAGCACTGCACTGGGTAGAT...AAATTTGGAGTGAACATTATACTGGGAATCTCTTTTGCTGTTTGTAAGGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp AGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTCCCAAGAAAGGCAGAGTTAACTaGTATATCCAAGCTACTTCT +
Preference number: 4 (lower is better)
Translates to: RQLCPWQLHIINVASFPKKGRVN*YIQATS
Trigger: AGAAGTAGCTTGGATATAGCAGTTAACTCTGCCTTT...CTTGGGAAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp AGTGAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGTGATTATGTCTTCCTTAGGACGACTAAGTaGAATATCATCTTGGCACAG +
Preference number: 4 (lower is better)
Translates to: SEYRLLFHSSLLISDYVFLRTTK*NIILAQ
Trigger: CTGTGCCAAGATGATATTCCACTTAGTCGTCCTAAG...GAAGACATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286196.9
CDS-3UTR CCA 90 bp TTAATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGTTGAACAGGAGCCTCTaGGTGCTCTTTGAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: LMIVLIIRHLCMKIVLSRLNRSL*VLFEFF
Trigger: AAAGAACTCAAAGAGCACCCAGAGGCTCCTGTTCAA...CCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp AGTGAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGTGATTATGTCTTCCTACTCCTAGCTCATTaGCATACTGTAATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SEYRLLFHSSLLISDYVFLLLAH*HTVILL
Trigger: CAGCAGAATTACAGTATGCCAATGAGCTAGGAGTAG...GAAGACATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CCA 90 bp AATGTCCCCGTTTTAAGGTTCATAACCTTAATCATATCTGCAAATCCCTTTGGCGAAGGTTTGAGAGGTTaGATAGCTGATCTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: NVPVLRFITLIISANPFGEGLRG*IADLLL
Trigger: TAGCAGGAGATCAGCTATCCAACCTCTCAAACCTTC...GCCAAAGGGATTTGCAGATATGATTAAGGTTATGAACCTTAAAACGGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp AATGTCCCCGTTTTAAGGTTCATAACCTTAATCATATCTGCAAATCCCTTTGGCATTCACCACAATCCATaGCTGGAGAATCTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: NVPVLRFITLIISANPFGIHHNP*LENLFL
Trigger: GAGGAACAGATTCTCCAGCCATGGATTGTGGTGAAT...GCCAAAGGGATTTGCAGATATGATTAAGGTTATGAACCTTAAAACGGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp TTAATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGAATATCATCTTGACTTaGCACAGGTGGAAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: LMIVLIIRHLCMKIVLSRNIILT*HRWKSS
Trigger: CGAGCTCTTCCACCTGTGCCAAGTCAAGATGATATT...CCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp TCATTTCGTAATAAAGATGAACTAGATGACTTCTTTTGGGTGGAGGAAGTCTCCAATATCATCTTGACTTaGCACAGGTGGAAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: SFRNKDELDDFFWVEEVSNIILT*HRWKSS
Trigger: CGAGCTCTTCCACCTGTGCCAAGTCAAGATGATATT...GGAGACTTCCTCCACCCAAAAGAAGTCATCTAGTTCATCTTTATTACGAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CCA 90 bp TTCAGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTGCTGTTCATTCCCTGCTTCCTaGAGACATGCATTAGCAGTG +
Preference number: 4 (lower is better)
Translates to: FRFILCGVLITAPHETCCSFPAS*RHALAV
Trigger: CACTGCTAATGCATGTCTCCAGGAAGCAGGGAATGA...ACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp CCTGATGTACAACCAGATATGAGAACCACTAGTACAGATTATAATGAGAAGCAATCATTCCCTGCTTCCTaGAGACATGCATTAGCAGTG +
Preference number: 4 (lower is better)
Translates to: PDVQPDMRTTSTDYNEKQSFPAS*RHALAV
Trigger: CACTGCTAATGCATGTCTCCAGGAAGCAGGGAATGA...TTGCTTCTCATTATAATCTGTACTAGTGGTTCTCATATCTGGTTGTACATCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGCCCTACCAATTGGACTaGATCAGCTTGCATGTCAAT +
Preference number: 4 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLPYQLD*ISLHVN
Trigger: ATTGACATGCAAGCTGATCCAGTCCAATTGGTAGGG...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp GTACTTCCCAGACCTGGAAGAATACAAAGGCAACTATGCCCATGGCAGTTACATCAGATTTATACTATGTaGTGTGTTAATTACTGCACC +
Preference number: 4 (lower is better)
Translates to: VLPRPGRIQRQLCPWQLHQIYTM*CVNYCT
Trigger: GGTGCAGTAATTAACACACCACATAGTATAAATCTG...ATGTAACTGCCATGGGCATAGTTGCCTTTGTATTCTTCCAGGTCTGGGAAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp TTCAGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTGCTGTGAGAGGTTGGATAGCTaGTCTCCTGCTAGAACATAT +
Preference number: 4 (lower is better)
Translates to: FRFILCGVLITAPHETCCERLDS*SPARTY
Trigger: ATATGTTCTAGCAGGAGATCAGCTATCCAACCTCTC...ACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp TCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTGCAGTCTTTTAATGATTCACTTGTCATTTGCTaGCTCAGAGATAGTATAAGA +
Preference number: 4 (lower is better)
Translates to: SGCDGLCARCGFVQSFNDSLVIC*LRDSIR
Trigger: TCTTATACTATCTCTGAGTCAGCAAATGACAAGTGA...ATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTTTATTCCTCCAAAGGTaGGCTGGTATTATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LISPYTYPKGRVNCYIQALFLQR*AGIMKR
Trigger: CCTCTTCATAATACCAGCTCACCTTTGGAGGAATAA...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp CCTGATGTACAACCAGATATGAGAACCACTAGTACAGATTATAATGAGAAGCAAAGTGGAATATCATCTTaGCTTGGCACAGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: PDVQPDMRTTSTDYNEKQSGISS*LGTGGR
Trigger: TCTTCCACCTGTGCCAAGTCAAGATGATATTCCACT...TTGCTTCTCATTATAATCTGTACTAGTGGTTCTCATATCTGGTTGTACATCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp AATGTCCCCGTTTTAAGGTTCATAACCTTAATCATATCTGCAAATCCCTTTGGCGTCTTCTCCTCAACTTaGGCTTTAGGGTCTCATATA +
Preference number: 4 (lower is better)
Translates to: NVPVLRFITLIISANPFGVFSST*ALGSHI
Trigger: TATATGAGACCCTAAAGCTCAAGTTGAGGAGAAGAC...GCCAAAGGGATTTGCAGATATGATTAAGGTTATGAACCTTAAAACGGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp AATGTCCCCGTTTTAAGGTTCATAACCTTAATCATATCTGCAAATCCCTTTGGCAAATTCACAATTCTGTaGCAGCAGGGAGAATCCCTT +
Preference number: 4 (lower is better)
Translates to: NVPVLRFITLIISANPFGKFTIL*QQGESL
Trigger: AAGGGATTCTCCCTGCTGTCACAGAATTGTGAATTT...GCCAAAGGGATTTGCAGATATGATTAAGGTTATGAACCTTAAAACGGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp TTCAGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTGCTGTAGCTTATTGCCAGATTaGGAACCATTGCTGGTCACA +
Preference number: 4 (lower is better)
Translates to: FRFILCGVLITAPHETCCSLLPD*EPLLVT
Trigger: TGTGACCAGCAATGGTTCTCAATCTGGCAATAAGCT...ACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGAGTAATGAGAAACCATaGTGCCCTACCAATTGGACT +
Preference number: 4 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLSNEKP*CPTNWT
Trigger: AGTCCAATTGGTAGGGCATCATGGTTTCTCATTACT...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp TCCAGCCTTACAAACAGCAAAAGAGATTCCCAGTATAATGTTCACTCCAAATTTCAGAGTTTTAGAAACTaGGCTCTTTGTACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SSLTNSKRDSQYNVHSKFQSFRN*ALCTWP
Trigger: TGGCCAGGTACAAAGAGCTCAGTTTCTAAAACTCTG...AAATTTGGAGTGAACATTATACTGGGAATCTCTTTTGCTGTTTGTAAGGCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp CCTGATGTACAACCAGATATGAGAACCACTAGTACAGATTATAATGAGAAGCAACAGAGTTTTAGAAACTaGGCTCTTTGTACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PDVQPDMRTTSTDYNEKQQSFRN*ALCTWP
Trigger: TGGCCAGGTACAAAGAGCTCAGTTTCTAAAACTCTG...TTGCTTCTCATTATAATCTGTACTAGTGGTTCTCATATCTGGTTGTACATCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp ATACAAAGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTATTCACAGACTGGAATaGGCCCAGATATCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: IQRQLCPWQLHIINVASFIHRLE*AQISFN
Trigger: ATTGAAGGATATCTGGGCTCATTCCAGTCTGTGAAT...AAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCTTTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp TTGGGTGGAGGAAGTCTCCAATTCATTGGTCATCCTTCCAAAATTATGCTCCATTGTTCCACAGTAGTTTaGTCATCAGTGATTATGTCT +
Preference number: 4 (lower is better)
Translates to: LGGGSLQFIGHPSKIMLHCSTVV*SSVIMS
Trigger: AGACATAATCACTGATGAGCAAACTACTGTGGAACA...ATGGAGCATAATTTTGGAAGGATGACCAATGAATTGGAGACTTCCTCCACCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444047.6
CDS-3UTR GCA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCGAGGATTTGTTTCCTTaGTCATTTGGGATACTCATA +
Preference number: 4 (lower is better)
Translates to: NDSPHYQTSVHENRPFTAEDLFP*SFGILI
Trigger: TATGAGTATCCCAAATGAGCAAGGAAACAAATCCTC...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCATACAAAGGCAACTATaGCCATGGCAGTTACATATT +
Preference number: 4 (lower is better)
Translates to: NDSPHYQTSVHENRPFTAIQRQL*PWQLHI
Trigger: AATATGTAACTGCCATGGGCATAGTTGCCTTTGTAT...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp TCCAGCCTTACAAACAGCAAAAGAGATTCCCAGTATAATGTTCACTCCAAATTTTGTGAGATCATTCCCTaGTTCCTGGAGACATGCATT +
Preference number: 4 (lower is better)
Translates to: SSLTNSKRDSQYNVHSKFCEIIP*FLETCI
Trigger: AATGCATGTCTCCAGGAAGCAGGGAATGATCTCACA...AAATTTGGAGTGAACATTATACTGGGAATCTCTTTTGCTGTTTGTAAGGCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp TCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAAAGGCAGAGTTAACTaGTATATCCAAGCTACTTCT +
Preference number: 4 (lower is better)
Translates to: SGCDGLCARCGFVQSFNDKGRVN*YIQATS
Trigger: AGAAGTAGCTTGGATATAGCAGTTAACTCTGCCTTT...ATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp TTAATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCTAGATGACTTCTTTTaGGTGGAGGAAGTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: LMIVLIIRHLCMKIVLSRLDDFF*VEEVSN
Trigger: ATTGGAGACTTCCTCCACCCAAAAGAAGTCATCTAG...CCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTCTAGATGACTTCTTTTaGGTGGAGGAAGTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: LISPYTYPKGRVNCYIQALDDFF*VEEVSN
Trigger: ATTGGAGACTTCCTCCACCCAAAAGAAGTCATCTAG...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp TTGAGAGGTTGGATAGCTGATCTCCTGCTAGAACATATATCACAACAATATTCCCTAGATGACTTCTTTTaGGTGGAGGAAGTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: LRGWIADLLLEHISQQYSLDDFF*VEEVSN
Trigger: ATTGGAGACTTCCTCCACCCAAAAGAAGTCATCTAG...GGAATATTGTTGTGATATATGTTCTAGCAGGAGATCAGCTATCCAACCTCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR CCA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTCTACTCCTAGCTCATTaGCATACTGTAATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LISPYTYPKGRVNCYIQALLLAH*HTVILL
Trigger: CAGCAGAATTACAGTATGCCAATGAGCTAGGAGTAG...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp ATACAAAGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTCTACTCCTAGCTCATTaGCATACTGTAATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: IQRQLCPWQLHIINVASFLLLAH*HTVILL
Trigger: CAGCAGAATTACAGTATGCCAATGAGCTAGGAGTAG...AAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCTTTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp CCTGATGTACAACCAGATATGAGAACCACTAGTACAGATTATAATGAGAAGCAAAAGTACAGAAGACTCTaGAATGGATACGCTAGGGTC +
Preference number: 4 (lower is better)
Translates to: PDVQPDMRTTSTDYNEKQKYRRL*NGYARV
Trigger: GACCCTAGCGTATCCATTCCAGAGTCTTCTGTACTT...TTGCTTCTCATTATAATCTGTACTAGTGGTTCTCATATCTGGTTGTACATCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp AATGTCCCCGTTTTAAGGTTCATAACCTTAATCATATCTGCAAATCCCTTTGGCACCACAATCCATGGCTaGAGAATCTGTTCCTCAATT +
Preference number: 4 (lower is better)
Translates to: NVPVLRFITLIISANPFGTTIHG*RICSSI
Trigger: AATTGAGGAACAGATTCTCCAGCCATGGATTGTGGT...GCCAAAGGGATTTGCAGATATGATTAAGGTTATGAACCTTAAAACGGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGAATATCATCTTGACTTaGCACAGGTGGAAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQNIILT*HRWKSS
Trigger: CGAGCTCTTCCACCTGTGCCAAGTCAAGATGATATT...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp ATTATGTCTTCATCTTCTACTCCTAGCTCATTGGCATACTGTAATTCTGCTGGCCTTAGGACGACTAAGTaGAATATCATCTTGACTTGG +
Preference number: 4 (lower is better)
Translates to: IMSSSSTPSSLAYCNSAGLRTTK*NIILTW
Trigger: CCAAGTCAAGATGATATTCCACTTAGTCGTCCTAAG...GCCAGCAGAATTACAGTATGCCAATGAGCTAGGAGTAGAAGATGAAGACATAAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CCA 90 bp GAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGTGATTATGTCTTCATCCTTAGGACGACTAAGTaGAATATCATCTTGACTTGG +
Preference number: 4 (lower is better)
Translates to: EYRLLFHSSLLISDYVFILRTTK*NIILTW
Trigger: CCAAGTCAAGATGATATTCCACTTAGTCGTCCTAAG...GATGAAGACATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CCA 90 bp TTAATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGGGTTTATATGCCTCCTaGGTCATTACGAGATCTGAA +
Preference number: 4 (lower is better)
Translates to: LMIVLIIRHLCMKIVLSRGLYAS*VITRSE
Trigger: TTCAGATCTCGTAATGACCCAGGAGGCATATAAACC...CCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp AGAAACCATGATGCCCTACCAATTGGACTGGATCAGCTTGCATGTCAATCTAGTCATCAGTTTCACTCCTaGGCATTTATCTTAAAGAAA +
Preference number: 4 (lower is better)
Translates to: RNHDALPIGLDQLACQSSHQFHS*AFILKK
Trigger: TTTCTTTAAGATAAATGCCCAGGAGTGAAACTGATG...ACTAGATTGACATGCAAGCTGATCCAGTCCAATTGGTAGGGCATCATGGTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTCATGGGAAATTAGAATaGTACCGCCAACTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LISPYTYPKGRVNCYIQAHGKLE*YRQLWK
Trigger: TTTCCAGAGTTGGCGGTACCATTCTAATTTCCCATG...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp TTAATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGATCCAAGCTACTTCTTaGCATATCCTTGTCAGCCTA +
Preference number: 4 (lower is better)
Translates to: LMIVLIIRHLCMKIVLSRIQATS*HILVSL
Trigger: TAGGCTGACAAGGATATGCCAAGAAGTAGCTTGGAT...CCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CAA 72 bp GACCTATTGTCAGGGTCAACTGTCTCTATCATCAATTaGTCAATCCTCTTCTGTTCTATAACATTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: DLLSGSTVSIIN*SILFCSITFRC
Trigger: GCACCTGAATGTTATAGAACAGAAGAGGATTGACAAATTGATGATAGAGACAGTTGACCCTGACAATAGGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp CCTGATGTACAACCAGATATGAGAACCACTAGTACAGATTATAATGAGAAGCAATTTGAGTTCTTTAGTTaGTGGCTCATTGCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: PDVQPDMRTTSTDYNEKQFEFFS*WLIALR
Trigger: TCTGAGGGCAATGAGCCATCAACTAAAGAACTCAAA...TTGCTTCTCATTATAATCTGTACTAGTGGTTCTCATATCTGGTTGTACATCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp TCCAGCCTTACAAACAGCAAAAGAGATTCCCAGTATAATGTTCACTCCAAATTTTTTGAGTTCTTTAGTTaGTGGCTCATTGCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: SSLTNSKRDSQYNVHSKFFEFFS*WLIALR
Trigger: TCTGAGGGCAATGAGCCATCAACTAAAGAACTCAAA...AAATTTGGAGTGAACATTATACTGGGAATCTCTTTTGCTGTTTGTAAGGCTGGA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp TTCAGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTGCTGTAGGCTTCACGTCCATTaGCACATCTATGTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: FRFILCGVLITAPHETCCRLHVH*HIYVFC
Trigger: ACAGAAAACATAGATGTGTCAATGGACGTGAAGCCT...ACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp TTTTCATTTCGTAATAAAGATGAACTAGATGACTTCTTTTGGGTGGAGGAAGTCAGTGGAATATCATCTTaGCTTGGCACAGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: FSFRNKDELDDFFWVEEVSGISS*LGTGGR
Trigger: TCTTCCACCTGTGCCAAGTCAAGATGATATTCCACT...GACTTCCTCCACCCAAAAGAAGTCATCTAGTTCATCTTTATTACGAAATGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS-3UTR TCA 90 bp TTAATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCTCATATACAACAGCTaGGGTACCATTGGATATAGT +
Preference number: 4 (lower is better)
Translates to: LMIVLIIRHLCMKIVLSRLIYNS*GTIGYS
Trigger: ACTATATCCAATGGTACCTCAGCTGTTGTATATGAG...CCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTTTCCTTGTGGTTATGTaGCTGAAATCCATTTCCTTG +
Preference number: 4 (lower is better)
Translates to: LISPYTYPKGRVNCYIQAFLVVM*LKSISL
Trigger: CAAGGAAATGGATTTCAGTCACATAACCACAAGGAA...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp TCCAGCCTTACAAACAGCAAAAGAGATTCCCAGTATAATGTTCACTCCAAATTTATTCACAGACTGGAATaGGCCCAGATATCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: SSLTNSKRDSQYNVHSKFIHRLE*AQISFN
Trigger: ATTGAAGGATATCTGGGCTCATTCCAGTCTGTGAAT...AAATTTGGAGTGAACATTATACTGGGAATCTCTTTTGCTGTTTGTAAGGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp TTCAGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTGCTGTATACTGCCAGCTTATTaGCAGATTGAGAACCATTGC +
Preference number: 4 (lower is better)
Translates to: FRFILCGVLITAPHETCCILPAY*QIENHC
Trigger: GCAATGGTTCTCAATCTGGCAATAAGCTGGCAGTAT...ACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGTATGAACTCCTATACTaGCAGCTTATTGCCAGATTG +
Preference number: 4 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLYELLY*QLIARL
Trigger: CAATCTGGCAATAAGCTGGCAGTATAGGAGTTCATA...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp AATGTCCCCGTTTTAAGGTTCATAACCTTAATCATATCTGCAAATCCCTTTGGCTATGAACTCCTATACTaGCAGCTTATTGCCAGATTG +
Preference number: 4 (lower is better)
Translates to: NVPVLRFITLIISANPFGYELLY*QLIARL
Trigger: CAATCTGGCAATAAGCTGGCAGTATAGGAGTTCATA...GCCAAAGGGATTTGCAGATATGATTAAGGTTATGAACCTTAAAACGGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp TTCAGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTGCTGTTGCTTCCTGGAGACATaGATTAGCAGTGAACTTCTT +
Preference number: 4 (lower is better)
Translates to: FRFILCGVLITAPHETCCCFLET*ISSELL
Trigger: AAGAAGTTCACTGCTAATGCATGTCTCCAGGAAGCA...ACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGATGACTTCTTTTGGGTaGAGGAAGTCTCCAATTCAA +
Preference number: 4 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLMTSFG*RKSPIQ
Trigger: TTGAATTGGAGACTTCCTCCACCCAAAAGAAGTCAT...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp TGGAGGAAGTCTCCAATTCATTGGTCATCCTTCCAAAATTATGCTCCATTCTCCCATCTATGTTTTCTGTaGTCTTTATCAACTCTGAAC +
Preference number: 4 (lower is better)
Translates to: WRKSPIHWSSFQNYAPFSHLCFL*SLSTLN
Trigger: GTTCAGAGTTGATAAAGACCACAGAAAACATAGATG...GGAGAATGGAGCATAATTTTGGAAGGATGACCAATGAATTGGAGACTTCCTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444047.6
CDS-3UTR CCA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGCTTAGGACGACTAAGTaGAATATCATCTTGACTTGG +
Preference number: 4 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLLRTTK*NIILTW
Trigger: CCAAGTCAAGATGATATTCCACTTAGTCGTCCTAAG...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp TCCAGCCTTACAAACAGCAAAAGAGATTCCCAGTATAATGTTCACTCCAAATTTCCAGGGATTAGGACATaGACATCTTTAGGAGACATT +
Preference number: 4 (lower is better)
Translates to: SSLTNSKRDSQYNVHSKFPGIRT*TSLGDI
Trigger: AATGTCTCCTAAAGATGTCCATGTCCTAATCCCTGG...AAATTTGGAGTGAACATTATACTGGGAATCTCTTTTGCTGTTTGTAAGGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp TCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTGCAGTCTTTTAATGATATCTGCAAATCCCTTTaGCCAAGTAAAGTAGTATAT +
Preference number: 4 (lower is better)
Translates to: SGCDGLCARCGFVQSFNDICKSL*PSKVVY
Trigger: ATATACTACTTTACTTGGCCAAAGGGATTTGCAGAT...ATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGGCATTATTCACAGACTaGAATGAGCCCAGATATCCT +
Preference number: 4 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQALFTD*NEPRYP
Trigger: AGGATATCTGGGCTCATTCCAGTCTGTGAATAATGC...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGCTCTGGAAAACAGCTTaGCAGTTTGTAACTACATAC +
Preference number: 4 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLLWKTA*QFVTTY
Trigger: GTATGTAGTTACAAACTGCCAAGCTGTTTTCCAGAG...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp TTAATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCTCTGGAAAACAGCTTaGCAGTTTGTAACTACATAC +
Preference number: 4 (lower is better)
Translates to: LMIVLIIRHLCMKIVLSRLWKTA*QFVTTY
Trigger: GTATGTAGTTACAAACTGCCAAGCTGTTTTCCAGAG...CCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp ATAATGTTCACTCCAAATTTAGACCTATTGTCAGGGTCAACTGTCTCTATCATCCATGGGAAATTAGAATaGTACCGCCAACTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: IMFTPNLDLLSGSTVSIIHGKLE*YRQLWK
Trigger: TTTCCAGAGTTGGCGGTACCATTCTAATTTCCCATG...GATGATAGAGACAGTTGACCCTGACAATAGGTCTAAATTTGGAGTGAACATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR TCA 90 bp TTCAGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTGCTGTCAGTCAAACAATTTTTaGGACACACCAGAAACACCA +
Preference number: 4 (lower is better)
Translates to: FRFILCGVLITAPHETCCQSNNF*DTPETP
Trigger: TGGTGTTTCTGGTGTGTCTCAAAAATTGTTTGACTG...ACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp ATACAAAGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTTGTTCCACAGTAGTTTaGTCATCAGTGATTATGTCT +
Preference number: 4 (lower is better)
Translates to: IQRQLCPWQLHIINVASFCSTVV*SSVIMS
Trigger: AGACATAATCACTGATGAGCAAACTACTGTGGAACA...AAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCTTTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp TCATTTCGTAATAAAGATGAACTAGATGACTTCTTTTGGGTGGAGGAAGTCTCCGACTTTTCTAGTTCCTaGCCTTCTACTCCTATAATT +
Preference number: 4 (lower is better)
Translates to: SFRNKDELDDFFWVEEVSDFSSS*PSTPII
Trigger: AATTATAGGAGTAGAAGGGCAGGAACTAGAAAAGTC...GGAGACTTCCTCCACCCAAAAGAAGTCATCTAGTTCATCTTTATTACGAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CCA 90 bp TTCAGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTGCTGTATGACTTCTTTTGGGTaGAGGAAGTCTCCAATTCAA +
Preference number: 4 (lower is better)
Translates to: FRFILCGVLITAPHETCCMTSFG*RKSPIQ
Trigger: TTGAATTGGAGACTTCCTCCACCCAAAAGAAGTCAT...ACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp CCTGATGTACAACCAGATATGAGAACCACTAGTACAGATTATAATGAGAAGCAAGAGGATTTGTTTCCTTaGTCATTTGGGATACTCATA +
Preference number: 4 (lower is better)
Translates to: PDVQPDMRTTSTDYNEKQEDLFP*SFGILI
Trigger: TATGAGTATCCCAAATGAGCAAGGAAACAAATCCTC...TTGCTTCTCATTATAATCTGTACTAGTGGTTCTCATATCTGGTTGTACATCAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp ATACAAAGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTTTAGGGTTCATGTTATaGAACATAAAGTACACAGCA +
Preference number: 4 (lower is better)
Translates to: IQRQLCPWQLHIINVASFLGFML*NIKYTA
Trigger: TGCTGTGTACTTTATGTTGCATAACATGAACCCTAA...AAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCTTTGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp TCCAGCCTTACAAACAGCAAAAGAGATTCCCAGTATAATGTTCACTCCAAATTTCAAGGTGTGGTTTTGTaGAGTCTTTTAATGATAGTC +
Preference number: 4 (lower is better)
Translates to: SSLTNSKRDSQYNVHSKFQGVVL*SLLMIV
Trigger: GACTATCATTAAAAGACTGCACAAAACCACACCTTG...AAATTTGGAGTGAACATTATACTGGGAATCTCTTTTGCTGTTTGTAAGGCTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp ATACAAAGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTCATCTATGTTTTCTGTaGTCTTTATCAACTCTGAAC +
Preference number: 4 (lower is better)
Translates to: IQRQLCPWQLHIINVASFHLCFL*SLSTLN
Trigger: GTTCAGAGTTGATAAAGACCACAGAAAACATAGATG...AAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCTTTGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp TCATTTCGTAATAAAGATGAACTAGATGACTTCTTTTGGGTGGAGGAAGTCTCCCATCTATGTTTTCTGTaGTCTTTATCAACTCTGAAC +
Preference number: 4 (lower is better)
Translates to: SFRNKDELDDFFWVEEVSHLCFL*SLSTLN
Trigger: GTTCAGAGTTGATAAAGACCACAGAAAACATAGATG...GGAGACTTCCTCCACCCAAAAGAAGTCATCTAGTTCATCTTTATTACGAAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CCA 90 bp TTCAGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTGCTGTAAATGGGACAAATACTaGGTCATTATTCCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: FRFILCGVLITAPHETCCKWDKY*VIIPPK
Trigger: CTTTGGAGGAATAATGACCCAGTATTTGTCCCATTT...ACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp GAGGGAGACTCTCTGAAAGAAAATGATGTTTATTCAGGAGTAGGCATTGCAATACATCAGTTTCACTCCTaGGCATTTATCTTAAAGAAA +
Preference number: 4 (lower is better)
Translates to: EGDSLKENDVYSGVGIAIHQFHS*AFILKK
Trigger: TTTCTTTAAGATAAATGCCCAGGAGTGAAACTGATG...TATTGCAATGCCTACTCCTGAATAAACATCATTTTCTTTCAGAGAGTCTCCCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTCAGATTTATACTATGTaGTGTGTTAATTACTGCACC +
Preference number: 4 (lower is better)
Translates to: LISPYTYPKGRVNCYIQAQIYTM*CVNYCT
Trigger: GGTGCAGTAATTAACACACCACATAGTATAAATCTG...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR GCA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGTTAGGGTTCATGTTATaGAACATAAAGTACACAGCA +
Preference number: 4 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQLGFML*NIKYTA
Trigger: TGCTGTGTACTTTATGTTGCATAACATGAACCCTAA...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp TTCAGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTGCTGTCATCTATGTTTTCTGTaGTCTTTATCAACTCTGAAC +
Preference number: 4 (lower is better)
Translates to: FRFILCGVLITAPHETCCHLCFL*SLSTLN
Trigger: GTTCAGAGTTGATAAAGACCACAGAAAACATAGATG...ACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CCA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGATCTGCAAATCCCTTTaGCCAAGTAAAGTAGTATAT +
Preference number: 4 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQICKSL*PSKVVY
Trigger: ATATACTACTTTACTTGGCCAAAGGGATTTGCAGAT...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
3UTR CAA 72 bp AATCACCACCAATTTAGCAGCTTAGTCAACATACACTaGCTATCTTACAGTTCTGTATGTCAAAAGTATGAC +
Preference number: 4 (lower is better)
Translates to: NHHQFSSLVNIH*LSYSSVCQKYD
Trigger: GTCATACTTTTGACATACAGAACTGTAAGATAGCAAGTGTATGTTGACTAAGCTGCTAAATTGGTGGTGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS GCA 90 bp GTCATCGGGCCGCGCCGCCTGGCTAGTACCCCGCGCGCAGCGCCCTaGGGGGATGTTGCGGTGAGAGGCGTGCAGGGACCTGGATTGGCC +
Preference number: 5 (lower is better)
Translates to: VIGPRRLASTPRAAP*GDVAVRGVQGPGLA
Trigger: GGCCAATCCAGGTCCCTGCACGCCTCTCACCGCAACATCCCCGCAGGGCGCTGCGCGCGGGGTACTAGCCAGGCGGCGCGGCCCGATGAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409444.6
CDS TCA 90 bp GCCTGGCTAGTACCCCGCGCGCAGCGCCCTGCGGGGATGTTGCGGTaGGAGGCGTGCAGGGACCTGGATTGGCCAGTCCAGACTAGCCCT +
Preference number: 5 (lower is better)
Translates to: AWLVPRAQRPAGMLR*EACRDLDWPVQTSP
Trigger: AGGGCTAGTCTGGACTGGCCAATCCAGGTCCCTGCACGCCTCTCACCGCAACATCCCCGCAGGGCGCTGCGCGCGGGGTACTAGCCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409444.6
CDS CCA 90 bp AAGAAGAAGACACACCAGAGCTCTCTCTGCCACATGACGACACAGTaGCAGCTGTCGGCAAGCCAGGAAGGGGCCTTCTCCAGTAACCTA +
Preference number: 5 (lower is better)
Translates to: KKKTHQSSLCHMTTQ*QLSASQEGAFSSNL
Trigger: TAGGTTACTGGAGAAGGCCCCTTCCTGGCTTGCCGACAGCTGCCACTGTGTCGTCATGTGGCAGAGAGAGCTCTGGTGTGTCTTCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466839.5
CDS-3UTR CAA 90 bp AAAGCCCGGTGCACTGTAAGTGCCACATCTCTGGTGGTCCAGGAAGGCTTCACGCTTCCTCCGAGGTTTTaGAATAACTGCCTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: KARCTVSATSLVVQEGFTLPPRF*NNCLLS
Trigger: GCTGAGGAGGCAGTTATTCAAAAACCTCGGAGGAAG...CGTGAAGCCTTCCTGGACCACCAGAGATGTGGCACTTACAGTGCACCGGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS TCA 90 bp ATCCTTTTAAGAAGAAGAAGACACACCAGAGCTCTCTCTGCCACATaGCGACACAGTGGCAGCTGTCGGCAAGCCAGGAAGGGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: ILLRRRRHTRALSAT*RHSGSCRQARKGPS
Trigger: AGAAGGCCCCTTCCTGGCTTGCCGACAGCTGCCACTGTGTCGTCATGTGGCAGAGAGAGCTCTGGTGTGTCTTCTTCTTCTTAAAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466839.5
CDS-3UTR CAA 90 bp GCCTACAGGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGACTGCTGTTCCACGCCTCTGGGTGCTCTTaGAGTTCTTTAGTTGATGGC +
Preference number: 5 (lower is better)
Translates to: AYRLANASGCSEYRLLFHASGCS*SSLVDG
Trigger: GCCATCAACTAAAGAACTCAAAGAGCACCCAGAGGC...GTGGAACAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCCTGTAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CAA 90 bp GAACTCCTATACTGCCAGCTTATTGCCAGATTGAGAACCATTGCTGGTCACAGTAAGGGGGCCTCGGAGTaGGGGGTAATGTGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: ELLYCQLIARLRTIAGHSKGASE*GVMCPG
Trigger: TCCTGGGCACATTACCCCCAACTCCGAGGCCCCCTT...ACTGTGACCAGCAATGGTTCTCAATCTGGCAATAAGCTGGCAGTATAGGAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409444.6
CDS-3UTR CAA 90 bp GCCTACAGGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGACTGCTGTTCCACAAGTGGAATATCATCTaGGCACAGGTGGAAGAGCTC +
Preference number: 5 (lower is better)
Translates to: AYRLANASGCSEYRLLFHKWNII*AQVEEL
Trigger: GAGCTCTTCCACCTGTGCCAAGATGATATTCCACTT...GTGGAACAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCCTGTAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286196.9
CDS-3UTR CAA 90 bp CGGTGCACTGTAAGTGCCACATCTCTGGTGGTCCAGGAAGGCTTCACGTCCATTCTGGCTGGGTTTTCTTaGTCTTCCTCCGAGGTTTTT +
Preference number: 5 (lower is better)
Translates to: RCTVSATSLVVQEGFTSILAGFS*SSSEVF
Trigger: AAAAACCTCGGAGGAAGACAAAGAAAACCCAGCCAG...AATGGACGTGAAGCCTTCCTGGACCACCAGAGATGTGGCACTTACAGTGCACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CAA 90 bp AGAGATCTTTCCCAGTGCAGGACCCATCTCAAGAGGGGGATTTCCTGGAAAACCCCACAATCCCCCACATaGGCAGCAGCTTTCTCACAT +
Preference number: 5 (lower is better)
Translates to: RDLSQCRTHLKRGISWKTPQSPT*AAAFSH
Trigger: ATGTGAGAAAGCTGCTGCCAATGTGGGGGATTGTGG...GGTTTTCCAGGAAATCCCCCTCTTGAGATGGGTCCTGCACTGGGAAAGATCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp GAAAAGAGACCAATCATCCTGAAAGCCCGGTGCACTGTAAGTGCCACATCTCTGTTAGTTGATGGCTCATaGCCCTCAGAGGGCCTTCGA +
Preference number: 5 (lower is better)
Translates to: EKRPIILKARCTVSATSLLVDGS*PSEGLR
Trigger: TCGAAGGCCCTCTGAGGGCAATGAGCCATCAACTAA...CAGAGATGTGGCACTTACAGTGCACCGGGCTTTCAGGATGATTGGTCTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR CAA 90 bp GAACTCCTATACTGCCAGCTTATTGCCAGATTGAGAACCATTGCTGGTCACAGTGTTGCCAGTTGGACATaGGACAGGGAGTTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: ELLYCQLIARLRTIAGHSVASWT*DRELLG
Trigger: GCCCAGCAACTCCCTGTCCAATGTCCAACTGGCAAC...ACTGTGACCAGCAATGGTTCTCAATCTGGCAATAAGCTGGCAGTATAGGAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS GCA 90 bp GATTATAATCCTTTTAAGAAGAAGAAGACACACCAGAGCTCTCTCTaGCACATGACGACACAGTGGCAGCTGTCGGCAAGCCAGGAAGGG +
Preference number: 5 (lower is better)
Translates to: DYNPFKKKKTHQSSL*HMTTQWQLSASQEG
Trigger: CCCTTCCTGGCTTGCCGACAGCTGCCACTGTGTCGTCATGTGGCAGAGAGAGCTCTGGTGTGTCTTCTTCTTCTTAAAAGGATTATAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466839.5
CDS-3UTR CAA 90 bp TACAGGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGACTGCTGTTCCACAGTCTGGCTGGGTTTTCTTaGTCTTCCTCCGAGGTTTTT +
Preference number: 5 (lower is better)
Translates to: YRLANASGCSEYRLLFHSLAGFS*SSSEVF
Trigger: AAAAACCTCGGAGGAAGACAAAGAAAACCCAGCCAG...ACTGTGGAACAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CAA 90 bp GCCTACAGGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGACTGCTGTTCCACTCTACTCCTAGCTCATaGGCATACTGTAATTCTGCT +
Preference number: 5 (lower is better)
Translates to: AYRLANASGCSEYRLLFHSTPSS*AYCNSA
Trigger: AGCAGAATTACAGTATGCCAATGAGCTAGGAGTAGA...GTGGAACAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCCTGTAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CAA 90 bp GGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGACTGCTGTTCCACAGTAGTTGAATATCATCTTGACTaGGCACAGGTGGAAGAGCTC +
Preference number: 5 (lower is better)
Translates to: GWLMPVGAVNTDCCSTVVEYHLD*AQVEEL
Trigger: GAGCTCTTCCACCTGTGCCAAGTCAAGATGATATTC...AACTACTGTGGAACAGCAGTCTGTATTCACTGCACCCACTGGCATTAGCCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CAA 90 bp ACTTGTACAGGGCCACTAGCTGCTCAGGTTTATATGCCTCCTGGGTCATTACGACTGGCTGGGTTTTCTTaGTCTTCCTCCGAGGTTTTT +
Preference number: 5 (lower is better)
Translates to: TCTGPLAAQVYMPPGSLRLAGFS*SSSEVF
Trigger: AAAAACCTCGGAGGAAGACAAAGAAAACCCAGCCAG...TCGTAATGACCCAGGAGGCATATAAACCTGAGCAGCTAGTGGCCCTGTACAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp AGTGCCACATCTCTGGTGGTCCAGGAAGGCTTCACGTCCATTGACACATCTATGAAGTGGAATATCATCTaGACTTGGCACAGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: SATSLVVQEGFTSIDTSMKWNII*TWHRWK
Trigger: CTTCCACCTGTGCCAAGTCAAGATGATATTCCACTT...CATAGATGTGTCAATGGACGTGAAGCCTTCCTGGACCACCAGAGATGTGGCACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS CCA 90 bp ACTGGCCTTAATTCTATCCTCAATGAAGTGGAGATTCGGGGCTGCTaGGGCCTTAATTCTCCCTTATCTGTGATGTTTACTACGCCTGAG +
Preference number: 5 (lower is better)
Translates to: TGLNSILNEVEIRGC*GLNSPLSVMFTTPE
Trigger: CTCAGGCGTAGTAAACATCACAGATAAGGGAGAATTAAGGCCCCAGCAGCCCCGAATCTCCACTTCATTGAGGATAGAATTAAGGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463205.2
CDS-3UTR CAA 90 bp GGTGCAGTGAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGTGATTATGTTAGTTGATGGCTCATaGCCCTCAGAGGGCCTTCGA +
Preference number: 5 (lower is better)
Translates to: GAVNTDCCSTVVCSSVIMLVDGS*PSEGLR
Trigger: TCGAAGGCCCTCTGAGGGCAATGAGCCATCAACTAA...CATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTCACTGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CAA 90 bp CACAAATACTTTGCCTACAGGCTGGCTAATGCCAGTGGGTGCAGTGAATACAGAGAATATCATCTTGACTaGGCACAGGTGGAAGAGCTC +
Preference number: 5 (lower is better)
Translates to: HKYFAYRLANASGCSEYREYHLD*AQVEEL
Trigger: GAGCTCTTCCACCTGTGCCAAGTCAAGATGATATTC...TCTGTATTCACTGCACCCACTGGCATTAGCCAGCCTGTAGGCAAAGTATTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CAA 90 bp ACTTGTACAGGGCCACTAGCTGCTCAGGTTTATATGCCTCCTGGGTCATTACGAAAGTGGAATATCATCTaGACTTGGCACAGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: TCTGPLAAQVYMPPGSLRKWNII*TWHRWK
Trigger: CTTCCACCTGTGCCAAGTCAAGATGATATTCCACTT...TCGTAATGACCCAGGAGGCATATAAACCTGAGCAGCTAGTGGCCCTGTACAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp GTACTTCCCAGACCTGGAAGAATACAAAGGCAACTATGCCCATGGCAGTTACATGCTCTAGGGGAGGATTaGTTTCCTTGCTCATTTGGG +
Preference number: 5 (lower is better)
Translates to: VLPRPGRIQRQLCPWQLHALGED*FPCSFG
Trigger: CCCAAATGAGCAAGGAAACAAATCCTCCCCTAGAGC...ATGTAACTGCCATGGGCATAGTTGCCTTTGTATTCTTCCAGGTCTGGGAAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp AGAAACCATGATGCCCTACCAATTGGACTGGATCAGCTTGCATGTCAATCTAGTAACCTGCACCTCACCTaGTGCTCCTCAGAGTACATG +
Preference number: 5 (lower is better)
Translates to: RNHDALPIGLDQLACQSSNLHLT*CSSEYM
Trigger: CATGTACTCTGAGGAGCACAAGGTGAGGTGCAGGTT...ACTAGATTGACATGCAAGCTGATCCAGTCCAATTGGTAGGGCATCATGGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp CCTTCCTTTCTTGGCTCTAGGGGAGGATTTGTTTCCTTGCTCATTTGGGATACTCAAGGATGTTGCCAGTaGGACATTGGACAGGGAGTT +
Preference number: 5 (lower is better)
Translates to: PSFLGSRGGFVSLLIWDTQGCCQ*DIGQGV
Trigger: AACTCCCTGTCCAATGTCCAACTGGCAACATCCTTG...AGTATCCCAAATGAGCAAGGAAACAAATCCTCCCCTAGAGCCAAGAAAGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS CCA 90 bp TGGTCCAGGAAGGCTTCACGTCCATTGACACATCTATGTTTTCTGTaGTCTTTATCAACTCTGAACGATCAGCAGCCTGGAATCTCCCTT +
Preference number: 5 (lower is better)
Translates to: WSRKASRPLTHLCFL*SLSTLNDQQPGISL
Trigger: AAGGGAGATTCCAGGCTGCTGATCGTTCAGAGTTGATAAAGACCACAGAAAACATAGATGTGTCAATGGACGTGAAGCCTTCCTGGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466839.5
CDS-3UTR CAA 90 bp CTTCTACTCCTAGCTCATTGGCATACTGTAATTCTGCTGGCTGGGTTTTCTTTGGCCTCTGGGTGCTCTTaGAGTTCTTTAGTTGATGGC +
Preference number: 5 (lower is better)
Translates to: LLLLAHWHTVILLAGFSLASGCS*SSLVDG
Trigger: GCCATCAACTAAAGAACTCAAAGAGCACCCAGAGGC...CAAAGAAAACCCAGCCAGCAGAATTACAGTATGCCAATGAGCTAGGAGTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CAA 90 bp GAGACCAATCATCCTGAAAGCCCGGTGCACTGTAAGTGCCACATCTCTGGTGGTATTCAAGAGGTAGCCTaGTCTTTTTCTGTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: ETNHPESPVHCKCHISGGIQEVA*SFSVFF
Trigger: AAAGAAGACAGAAAAAGACAAGGCTACCTCTTGAAT...ACCACCAGAGATGTGGCACTTACAGTGCACCGGGCTTTCAGGATGATTGGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286196.9
CDS-3UTR CAA 90 bp AGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTCCCAAGCTTCCTCCGAGGTTTTaGAATAACTGCCTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: RQLCPWQLHIINVASFPKLPPRF*NNCLLS
Trigger: GCTGAGGAGGCAGTTATTCAAAAACCTCGGAGGAAG...CTTGGGAAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp GCTGATCTCCTGCTAGAACATATATCACAACAATATTCCACACAGCACAGCCAGCTTCCTCCGAGGTTTTaGAATAACTGCCTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: ADLLLEHISQQYSTQHSQLPPRF*NNCLLS
Trigger: GCTGAGGAGGCAGTTATTCAAAAACCTCGGAGGAAG...CTGGCTGTGCTGTGTGGAATATTGTTGTGATATATGTTCTAGCAGGAGATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR CAA 90 bp CTGGTGGTCCAGGAAGGCTTCACGTCCATTGACACATCTATGTTTTCTGTGGTCCTGTTCCACAGTAGTTaGCTCATCAGTGATTATGTC +
Preference number: 5 (lower is better)
Translates to: LVVQEGFTSIDTSMFSVVLFHSS*LISDYV
Trigger: GACATAATCACTGATGAGCAAACTACTGTGGAACAG...GACCACAGAAAACATAGATGTGTCAATGGACGTGAAGCCTTCCTGGACCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CAA 90 bp ACTTGTACAGGGCCACTAGCTGCTCAGGTTTATATGCCTCCTGGGTCATTACGATTTTCCACAAATACTTaGCCTACAGGCTGGCTAATG +
Preference number: 5 (lower is better)
Translates to: TCTGPLAAQVYMPPGSLRFSTNT*PTGWLM
Trigger: CATTAGCCAGCCTGTAGGCAAAGTATTTGTGGAAAA...TCGTAATGACCCAGGAGGCATATAAACCTGAGCAGCTAGTGGCCCTGTACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp CTGGTGGTCCAGGAAGGCTTCACGTCCATTGACACATCTATGTTTTCTGTGGTCAAGGCTTCACGTCCATaGACACATCTATGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: LVVQEGFTSIDTSMFSVVKASRP*THLCFL
Trigger: CAGAAAACATAGATGTGTCAATGGACGTGAAGCCTT...GACCACAGAAAACATAGATGTGTCAATGGACGTGAAGCCTTCCTGGACCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CAA 90 bp CCTTCCTTTCTTGGCTCTAGGGGAGGATTTGTTTCCTTGCTCATTTGGGATACTGAATATCATCTTGACTaGGCACAGGTGGAAGAGCTC +
Preference number: 5 (lower is better)
Translates to: PSFLGSRGGFVSLLIWDTEYHLD*AQVEEL
Trigger: GAGCTCTTCCACCTGTGCCAAGTCAAGATGATATTC...AGTATCCCAAATGAGCAAGGAAACAAATCCTCCCCTAGAGCCAAGAAAGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp GAACTCCTATACTGCCAGCTTATTGCCAGATTGAGAACCATTGCTGGTCACAGTTTGGACTGGATCAGCTaGCATGTCAATCTAGTCCAC +
Preference number: 5 (lower is better)
Translates to: ELLYCQLIARLRTIAGHSLDWIS*HVNLVH
Trigger: GTGGACTAGATTGACATGCAAGCTGATCCAGTCCAA...ACTGTGACCAGCAATGGTTCTCAATCTGGCAATAAGCTGGCAGTATAGGAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp AGAGATCTTTCCCAGTGCAGGACCCATCTCAAGAGGGGGATTTCCTGGAAAACCCCTGCTCAGCCTCTTTaGCTACATAGATTTTTAAAA +
Preference number: 5 (lower is better)
Translates to: RDLSQCRTHLKRGISWKTPAQPL*LHRFLK
Trigger: TTTTAAAAATCTATGTAGCAAAAGAGGCTGAGCAGG...GGTTTTCCAGGAAATCCCCCTCTTGAGATGGGTCCTGCACTGGGAAAGATCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp CCTGATGTACAACCAGATATGAGAACCACTAGTACAGATTATAATGAGAAGCAAAGGTCATCACTCTCCTaGGCTCATGGCCCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: PDVQPDMRTTSTDYNEKQRSSLS*AHGPLF
Trigger: GAAGAGGGGGCCATGAGCCAAGGAGAGTGATGACCT...TTGCTTCTCATTATAATCTGTACTAGTGGTTCTCATATCTGGTTGTACATCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp TTCAGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTGCTGTAGGTCATCACTCTCCTaGGCTCATGGCCCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: FRFILCGVLITAPHETCCRSSLS*AHGPLF
Trigger: GAAGAGGGGGCCATGAGCCAAGGAGAGTGATGACCT...ACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp AGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTCCCAAGCTGAAATCCATTTCCTaGCTCATTGTTGGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: RQLCPWQLHIINVASFPKLKSIS*LIVGQG
Trigger: CCCTTGGCCAACAATGAGCAAGGAAATGGATTTCAG...CTTGGGAAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCCAAGGATGTTGCCAGTaGGACATTGGACAGGGAGTT +
Preference number: 5 (lower is better)
Translates to: NDSPHYQTSVHENRPFTAQGCCQ*DIGQGV
Trigger: AACTCCCTGTCCAATGTCCAACTGGCAACATCCTTG...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp AGTGCCACATCTCTGGTGGTCCAGGAAGGCTTCACGTCCATTGACACATCTATGGAAGTCTCCAATTCATaGGTCATCCTTCCAAAATTA +
Preference number: 5 (lower is better)
Translates to: SATSLVVQEGFTSIDTSMEVSNS*VILPKL
Trigger: TAATTTTGGAAGGATGACCAATGAATTGGAGACTTC...CATAGATGTGTCAATGGACGTGAAGCCTTCCTGGACCACCAGAGATGTGGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444047.6
CDS-3UTR CAA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGTTAGTTGATGGCTCATaGCCCTCAGAGGGCCTTCGA +
Preference number: 5 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLLVDGS*PSEGLR
Trigger: TCGAAGGCCCTCTGAGGGCAATGAGCCATCAACTAA...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp AGTGAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGTGATTATGTCTTCGCCTCTGGGTGCTCTTaGAGTTCTTTAGTTGATGGC +
Preference number: 5 (lower is better)
Translates to: SEYRLLFHSSLLISDYVFASGCS*SSLVDG
Trigger: GCCATCAACTAAAGAACTCAAAGAGCACCCAGAGGC...GAAGACATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CAA 90 bp TGGGTGGAGGAAGTCTCCAATTCATTGGTCATCCTTCCAAAATTATGCTCCATTCTGGCTGGGTTTTCTTaGTCTTCCTCCGAGGTTTTT +
Preference number: 5 (lower is better)
Translates to: WVEEVSNSLVILPKLCSILAGFS*SSSEVF
Trigger: AAAAACCTCGGAGGAAGACAAAGAAAACCCAGCCAG...AATGGAGCATAATTTTGGAAGGATGACCAATGAATTGGAGACTTCCTCCACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444047.6
CDS-3UTR CAA 90 bp GTACTTCCCAGACCTGGAAGAATACAAAGGCAACTATGCCCATGGCAGTTACATAAGGCTTCACGTCCATaGACACATCTATGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: VLPRPGRIQRQLCPWQLHKASRP*THLCFL
Trigger: CAGAAAACATAGATGTGTCAATGGACGTGAAGCCTT...ATGTAACTGCCATGGGCATAGTTGCCTTTGTATTCTTCCAGGTCTGGGAAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp CCTTCCTTTCTTGGCTCTAGGGGAGGATTTGTTTCCTTGCTCATTTGGGATACTATTGTTGCAGAAGGTTaGAGAGGTTGGATAGCTGAT +
Preference number: 5 (lower is better)
Translates to: PSFLGSRGGFVSLLIWDTIVAEG*RGWIAD
Trigger: ATCAGCTATCCAACCTCTCAAACCTTCTGCAACAAT...AGTATCCCAAATGAGCAAGGAAACAAATCCTCCCCTAGAGCCAAGAAAGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp GGGTGCAGTGAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGTGATTATGGATACGCTAGGGTCTaGTATTGTTGCAGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: GCSEYRLLFHSSLLISDYGYARV*YCCRRF
Trigger: AAACCTTCTGCAACAATACAAGACCCTAGCGTATCC...ATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTCACTGCACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286196.9
CDS-3UTR CAA 90 bp CCTTCCTTTCTTGGCTCTAGGGGAGGATTTGTTTCCTTGCTCATTTGGGATACTACAGCTGAGGTACCATaGGATATAGTTCTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: PSFLGSRGGFVSLLIWDTTAEVP*DIVLKR
Trigger: TCTCTTCAGAACTATATCCAATGGTACCTCAGCTGT...AGTATCCCAAATGAGCAAGGAAACAAATCCTCCCCTAGAGCCAAGAAAGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp TCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTGCAGTCTTTTAATGATATAACATTCAGGTGCTaGCTAATCAGGGCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: SGCDGLCARCGFVQSFNDITFRC*LIRAGS
Trigger: TGAGCCTGCCCTGATTAGCAAGCACCTGAATGTTAT...ATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGCCACAATCCCCCACATaGGCAGCAGCTTTCTCACAT +
Preference number: 5 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLPQSPT*AAAFSH
Trigger: ATGTGAGAAAGCTGCTGCCAATGTGGGGGATTGTGG...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCCTGAAATCCATTTCCTaGCTCATTGTTGGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: NDSPHYQTSVHENRPFTALKSIS*LIVGQG
Trigger: CCCTTGGCCAACAATGAGCAAGGAAATGGATTTCAG...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp CCTTCCTTTCTTGGCTCTAGGGGAGGATTTGTTTCCTTGCTCATTTGGGATACTGGAGGATTTGTTTCCTaGCTCATTTGGGATACTCAT +
Preference number: 5 (lower is better)
Translates to: PSFLGSRGGFVSLLIWDTGGFVS*LIWDTH
Trigger: ATGAGTATCCCAAATGAGCAAGGAAACAAATCCTCC...AGTATCCCAAATGAGCAAGGAAACAAATCCTCCCCTAGAGCCAAGAAAGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp GAGGGAGACTCTCTGAAAGAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGCTGCCTTCCTTTCTaGGCTCTAGGGGAGGATTTG +
Preference number: 5 (lower is better)
Translates to: EGDSLKENDVYSGVGIAISCLPF*ALGEDL
Trigger: CAAATCCTCCCCTAGAGCCAAGAAAGGAAGGCAGCT...TATTGCAATGCCTACTCCTGAATAAACATCATTTTCTTTCAGAGAGTCTCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp TCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTGCAGTCTTTTAATGATTTGGACTGGATCAGCTaGCATGTCAATCTAGTCCAC +
Preference number: 5 (lower is better)
Translates to: SGCDGLCARCGFVQSFNDLDWIS*HVNLVH
Trigger: GTGGACTAGATTGACATGCAAGCTGATCCAGTCCAA...ATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp GTACTTCCCAGACCTGGAAGAATACAAAGGCAACTATGCCCATGGCAGTTACATTCAATAACAAGGATGTaGCCAGTTGGACATTGGACA +
Preference number: 5 (lower is better)
Translates to: VLPRPGRIQRQLCPWQLHSITRM*PVGHWT
Trigger: TGTCCAATGTCCAACTGGCAACATCCTTGTTATTGA...ATGTAACTGCCATGGGCATAGTTGCCTTTGTATTCTTCCAGGTCTGGGAAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp CCTGATGTACAACCAGATATGAGAACCACTAGTACAGATTATAATGAGAAGCAATTAGTTGATGGCTCATaGCCCTCAGAGGGCCTTCGA +
Preference number: 5 (lower is better)
Translates to: PDVQPDMRTTSTDYNEKQLVDGS*PSEGLR
Trigger: TCGAAGGCCCTCTGAGGGCAATGAGCCATCAACTAA...TTGCTTCTCATTATAATCTGTACTAGTGGTTCTCATATCTGGTTGTACATCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTGCCTCTGGGTGCTCTTaGAGTTCTTTAGTTGATGGC +
Preference number: 5 (lower is better)
Translates to: LISPYTYPKGRVNCYIQAASGCS*SSLVDG
Trigger: GCCATCAACTAAAGAACTCAAAGAGCACCCAGAGGC...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp AATGTCCCCGTTTTAAGGTTCATAACCTTAATCATATCTGCAAATCCCTTTGGCGCCTCTGGGTGCTCTTaGAGTTCTTTAGTTGATGGC +
Preference number: 5 (lower is better)
Translates to: NVPVLRFITLIISANPFGASGCS*SSLVDG
Trigger: GCCATCAACTAAAGAACTCAAAGAGCACCCAGAGGC...GCCAAAGGGATTTGCAGATATGATTAAGGTTATGAACCTTAAAACGGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp AATGTCCCCGTTTTAAGGTTCATAACCTTAATCATATCTGCAAATCCCTTTGGCCTTCCTCCGAGGTTTTaGAATAACTGCCTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: NVPVLRFITLIISANPFGLPPRF*NNCLLS
Trigger: GCTGAGGAGGCAGTTATTCAAAAACCTCGGAGGAAG...GCCAAAGGGATTTGCAGATATGATTAAGGTTATGAACCTTAAAACGGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp CTATGTTTTCTGTGGTCTTTATCAACTCTGAACGATCAGCAGCCTGGAATCTCCCTGTTCCACAGTAGTTaGCTCATCAGTGATTATGTC +
Preference number: 5 (lower is better)
Translates to: LCFLWSLSTLNDQQPGISLFHSS*LISDYV
Trigger: GACATAATCACTGATGAGCAAACTACTGTGGAACAG...GGAGATTCCAGGCTGCTGATCGTTCAGAGTTGATAAAGACCACAGAAAACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CAA 90 bp CTACTCCTAGCTCATTGGCATACTGTAATTCTGCTGGCTGGGTTTTCTTTGTCTTTTTCCACAAATACTTaGCCTACAGGCTGGCTAATG +
Preference number: 5 (lower is better)
Translates to: LLLAHWHTVILLAGFSLSFSTNT*PTGWLM
Trigger: CATTAGCCAGCCTGTAGGCAAAGTATTTGTGGAAAA...AGACAAAGAAAACCCAGCCAGCAGAATTACAGTATGCCAATGAGCTAGGAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CAA 90 bp GGTGCAGTGAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGTGATTATGATTGTTGCAGAAGGTTaGAGAGGTTGGATAGCTGAT +
Preference number: 5 (lower is better)
Translates to: GAVNTDCCSTVVCSSVIMIVAEG*RGWIAD
Trigger: ATCAGCTATCCAACCTCTCAAACCTTCTGCAACAAT...CATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTCACTGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR CAA 90 bp GTACTTCCCAGACCTGGAAGAATACAAAGGCAACTATGCCCATGGCAGTTACATTGTCAAAAGCTGAAATaGTACTCAGAGCCAAAAGCA +
Preference number: 5 (lower is better)
Translates to: VLPRPGRIQRQLCPWQLHCQKLK*YSEPKA
Trigger: TGCTTTTGGCTCTGAGTACAATTTCAGCTTTTGACA...ATGTAACTGCCATGGGCATAGTTGCCTTTGTATTCTTCCAGGTCTGGGAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp TGGGTGGAGGAAGTCTCCAATTCATTGGTCATCCTTCCAAAATTATGCTCCATTAAGTGGAATATCATCTaGACTTGGCACAGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: WVEEVSNSLVILPKLCSIKWNII*TWHRWK
Trigger: CTTCCACCTGTGCCAAGTCAAGATGATATTCCACTT...AATGGAGCATAATTTTGGAAGGATGACCAATGAATTGGAGACTTCCTCCACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444047.6
CDS-3UTR CAA 90 bp AGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTCCCAAGTTCTCACATTTCTCTTaGATGACACGGCTCAAGTGT +
Preference number: 5 (lower is better)
Translates to: RQLCPWQLHIINVASFPKFSHFS*MTRLKC
Trigger: ACACTTGAGCCGTGTCATCAAAGAGAAATGTGAGAA...CTTGGGAAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTGCTCTAGGGGAGGATTaGTTTCCTTGCTCATTTGGG +
Preference number: 5 (lower is better)
Translates to: LISPYTYPKGRVNCYIQAALGED*FPCSFG
Trigger: CCCAAATGAGCAAGGAAACAAATCCTCCCCTAGAGC...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp TTCAGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTGCTGTAGCTGCCTTCCTTTCTaGGCTCTAGGGGAGGATTTG +
Preference number: 5 (lower is better)
Translates to: FRFILCGVLITAPHETCCSCLPF*ALGEDL
Trigger: CAAATCCTCCCCTAGAGCCAAGAAAGGAAGGCAGCT...ACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp AGAAACCATGATGCCCTACCAATTGGACTGGATCAGCTTGCATGTCAATCTAGTTGTTCACACAAAAACTaGCACATGAATGTCCACAGC +
Preference number: 5 (lower is better)
Translates to: RNHDALPIGLDQLACQSSCSHKN*HMNVHS
Trigger: GCTGTGGACATTCATGTGCAAGTTTTTGTGTGAACA...ACTAGATTGACATGCAAGCTGATCCAGTCCAATTGGTAGGGCATCATGGTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp ATAATGTTCACTCCAAATTTAGACCTATTGTCAGGGTCAACTGTCTCTATCATCAACCTGCACCTCACCTaGTGCTCCTCAGAGTACATG +
Preference number: 5 (lower is better)
Translates to: IMFTPNLDLLSGSTVSIINLHLT*CSSEYM
Trigger: CATGTACTCTGAGGAGCACAAGGTGAGGTGCAGGTT...GATGATAGAGACAGTTGACCCTGACAATAGGTCTAAATTTGGAGTGAACATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS GCA 90 bp GAGATTCACCACAATCCATGGCTGGAGAATCTGTTCCTCAATTCCTaGTTCCCTAAAAATGTAGAAACACTCATTAGAAGTGCCTTCAGT +
Preference number: 5 (lower is better)
Translates to: EIHHNPWLENLFLNS*FPKNVETLIRSAFS
Trigger: ACTGAAGGCACTTCTAATGAGTGTTTCTACATTTTTAGGGAAGCAGGAATTGAGGAACAGATTCTCCAGCCATGGATTGTGGTGAATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495329.1
CDS-3UTR CAA 90 bp CATCTATGTTTTCTGTGGTCTTTATCAACTCTGAACGATCAGCAGCCTGGAATCTCTACTCCTAGCTCATaGGCATACTGTAATTCTGCT +
Preference number: 5 (lower is better)
Translates to: HLCFLWSLSTLNDQQPGISTPSS*AYCNSA
Trigger: AGCAGAATTACAGTATGCCAATGAGCTAGGAGTAGA...GATTCCAGGCTGCTGATCGTTCAGAGTTGATAAAGACCACAGAAAACATAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CAA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCTCTACTCCTAGCTCATaGGCATACTGTAATTCTGCT +
Preference number: 5 (lower is better)
Translates to: NDSPHYQTSVHENRPFTASTPSS*AYCNSA
Trigger: AGCAGAATTACAGTATGCCAATGAGCTAGGAGTAGA...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp TTGGGTGGAGGAAGTCTCCAATTCATTGGTCATCCTTCCAAAATTATGCTCCATTCTACTCCTAGCTCATaGGCATACTGTAATTCTGCT +
Preference number: 5 (lower is better)
Translates to: LGGGSLQFIGHPSKIMLHSTPSS*AYCNSA
Trigger: AGCAGAATTACAGTATGCCAATGAGCTAGGAGTAGA...ATGGAGCATAATTTTGGAAGGATGACCAATGAATTGGAGACTTCCTCCACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444047.6
CDS-3UTR CAA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCCTGTTCCACAGTAGTTaGCTCATCAGTGATTATGTC +
Preference number: 5 (lower is better)
Translates to: NDSPHYQTSVHENRPFTALFHSS*LISDYV
Trigger: GACATAATCACTGATGAGCAAACTACTGTGGAACAG...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp GCAGTGAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGTGATTATGTCTTTTTCCACAAATACTTaGCCTACAGGCTGGCTAATG +
Preference number: 5 (lower is better)
Translates to: AVNTDCCSTVVCSSVIMSFSTNT*PTGWLM
Trigger: CATTAGCCAGCCTGTAGGCAAAGTATTTGTGGAAAA...AGACATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTCACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CAA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCTTTTCCACAAATACTTaGCCTACAGGCTGGCTAATG +
Preference number: 5 (lower is better)
Translates to: NDSPHYQTSVHENRPFTAFSTNT*PTGWLM
Trigger: CATTAGCCAGCCTGTAGGCAAAGTATTTGTGGAAAA...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp TGCAGTGAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGTGATTATGTCAAGGCTTCACGTCCATaGACACATCTATGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: CSEYRLLFHSSLLISDYVKASRP*THLCFL
Trigger: CAGAAAACATAGATGTGTCAATGGACGTGAAGCCTT...GACATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTCACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286196.9
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CAA 90 bp TCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTGCAGTCTTTTAATGATATTGTTGCAGAAGGTTaGAGAGGTTGGATAGCTGAT +
Preference number: 5 (lower is better)
Translates to: SGCDGLCARCGFVQSFNDIVAEG*RGWIAD
Trigger: ATCAGCTATCCAACCTCTCAAACCTTCTGCAACAAT...ATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp GGGTGCAGTGAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGTGATTATTGTCAAAAGCTGAAATaGTACTCAGAGCCAAAAGCA +
Preference number: 5 (lower is better)
Translates to: GCSEYRLLFHSSLLISDYCQKLK*YSEPKA
Trigger: TGCTTTTGGCTCTGAGTACAATTTCAGCTTTTGACA...ATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTCACTGCACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286196.9
CDS-3UTR CAA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGGAATATCATCTTGACTaGGCACAGGTGGAAGAGCTC +
Preference number: 5 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLEYHLD*AQVEEL
Trigger: GAGCTCTTCCACCTGTGCCAAGTCAAGATGATATTC...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp TCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTGCAGTCTTTTAATGATACAGCTGAGGTACCATaGGATATAGTTCTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: SGCDGLCARCGFVQSFNDTAEVP*DIVLKR
Trigger: TCTCTTCAGAACTATATCCAATGGTACCTCAGCTGT...ATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp TCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCTTCTCCTCAACTaGAGCTTTAGGGTCTCATAT +
Preference number: 5 (lower is better)
Translates to: SGCDGLCARCGFVQSFNDSLLLN*SFRVSY
Trigger: ATATGAGACCCTAAAGCTCAAGTTGAGGAGAAGACT...ATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp ATACAAAGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTCAGCTTATTGCCAGATaGAGAACCATTGCTGGTCAC +
Preference number: 5 (lower is better)
Translates to: IQRQLCPWQLHIINVASFQLIAR*RTIAGH
Trigger: GTGACCAGCAATGGTTCTCAATCTGGCAATAAGCTG...AAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCTTTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp GAGGGAGACTCTCTGAAAGAAAATGATGTTTATTCAGGAGTAGGCATTGCAATACAGCTTATTGCCAGATaGAGAACCATTGCTGGTCAC +
Preference number: 5 (lower is better)
Translates to: EGDSLKENDVYSGVGIAIQLIAR*RTIAGH
Trigger: GTGACCAGCAATGGTTCTCAATCTGGCAATAAGCTG...TATTGCAATGCCTACTCCTGAATAAACATCATTTTCTTTCAGAGAGTCTCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS TCA 90 bp TACTACTATTCCCAGAAATCCAGACAGGCTGTATCTATGCTCCTATaGGCAAAGCATGAGTGCACCCATTTCCCATCAATATTGGATTTT +
Preference number: 5 (lower is better)
Translates to: YYYSQKSRQAVSMLL*AKHECTHFPSILDF
Trigger: AAAATCCAATATTGATGGGAAATGGGTGCACTCATGCTTTGCTCATAGGAGCATAGATACAGCCTGTCTGGATTTCTGGGAATAGTAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480124.1
CDS-3UTR CAA 90 bp TCCAGCCTTACAAACAGCAAAAGAGATTCCCAGTATAATGTTCACTCCAAATTTCTGGCTGGGTTTTCTTaGTCTTCCTCCGAGGTTTTT +
Preference number: 5 (lower is better)
Translates to: SSLTNSKRDSQYNVHSKFLAGFS*SSSEVF
Trigger: AAAAACCTCGGAGGAAGACAAAGAAAACCCAGCCAG...AAATTTGGAGTGAACATTATACTGGGAATCTCTTTTGCTGTTTGTAAGGCTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp ATATCACAACAATATTCCACACAGCACAGCCAGCCAAGAATCCATGAGAAAAGACTGTTCCACAGTAGTTaGCTCATCAGTGATTATGTC +
Preference number: 5 (lower is better)
Translates to: ISQQYSTQHSQPRIHEKRLFHSS*LISDYV
Trigger: GACATAATCACTGATGAGCAAACTACTGTGGAACAG...TCTTTTCTCATGGATTCTTGGCTGGCTGTGCTGTGTGGAATATTGTTGTGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR CAA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGGGATACGCTAGGGTCTaGTATTGTTGCAGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLGYARV*YCCRRF
Trigger: AAACCTTCTGCAACAATACAAGACCCTAGCGTATCC...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTGGATACGCTAGGGTCTaGTATTGTTGCAGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: LISPYTYPKGRVNCYIQAGYARV*YCCRRF
Trigger: AAACCTTCTGCAACAATACAAGACCCTAGCGTATCC...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp GAGGGAGACTCTCTGAAAGAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAAGTGGAATATCATCTaGACTTGGCACAGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: EGDSLKENDVYSGVGIAIKWNII*TWHRWK
Trigger: CTTCCACCTGTGCCAAGTCAAGATGATATTCCACTT...TATTGCAATGCCTACTCCTGAATAAACATCATTTTCTTTCAGAGAGTCTCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp ATAATGTTCACTCCAAATTTAGACCTATTGTCAGGGTCAACTGTCTCTATCATCATAACATTCAGGTGCTaGCTAATCAGGGCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: IMFTPNLDLLSGSTVSIIITFRC*LIRAGS
Trigger: TGAGCCTGCCCTGATTAGCAAGCACCTGAATGTTAT...GATGATAGAGACAGTTGACCCTGACAATAGGTCTAAATTTGGAGTGAACATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp AGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTCCCAAGGTCTCTATCATCAATTaGTCAATCCTCTTCTGTTCT +
Preference number: 5 (lower is better)
Translates to: RQLCPWQLHIINVASFPKVSIIN*SILFCS
Trigger: AGAACAGAAGAGGATTGACAAATTGATGATAGAGAC...CTTGGGAAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp ATAATGTTCACTCCAAATTTAGACCTATTGTCAGGGTCAACTGTCTCTATCATCATGATGCCCTACCAATaGGACTGGATCAGCTTGCAT +
Preference number: 5 (lower is better)
Translates to: IMFTPNLDLLSGSTVSIIMMPYQ*DWISLH
Trigger: ATGCAAGCTGATCCAGTCCAATTGGTAGGGCATCAT...GATGATAGAGACAGTTGACCCTGACAATAGGTCTAAATTTGGAGTGAACATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp TCCAGCCTTACAAACAGCAAAAGAGATTCCCAGTATAATGTTCACTCCAAATTTATGATGCCCTACCAATaGGACTGGATCAGCTTGCAT +
Preference number: 5 (lower is better)
Translates to: SSLTNSKRDSQYNVHSKFMMPYQ*DWISLH
Trigger: ATGCAAGCTGATCCAGTCCAATTGGTAGGGCATCAT...AAATTTGGAGTGAACATTATACTGGGAATCTCTTTTGCTGTTTGTAAGGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp AGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTCCCAAGTTGAGAGAATTATCCTaGGCTACAAGGATCAATAAC +
Preference number: 5 (lower is better)
Translates to: RQLCPWQLHIINVASFPKLRELS*ATRINN
Trigger: GTTATTGATCCTTGTAGCCAAGGATAATTCTCTCAA...CTTGGGAAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp GAGGGAGACTCTCTGAAAGAAAATGATGTTTATTCAGGAGTAGGCATTGCAATATATCCAAGCTACTTCTaGGCATATCCTTGTCAGCCT +
Preference number: 5 (lower is better)
Translates to: EGDSLKENDVYSGVGIAIYPSYF*AYPCQP
Trigger: AGGCTGACAAGGATATGCCAAGAAGTAGCTTGGATA...TATTGCAATGCCTACTCCTGAATAAACATCATTTTCTTTCAGAGAGTCTCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp CTACTCCTAGCTCATTGGCATACTGTAATTCTGCTGGCTGGGTTTTCTTTGTCTTTTCAAGAGGTAGCCTaGTCTTTTTCTGTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: LLLAHWHTVILLAGFSLSFQEVA*SFSVFF
Trigger: AAAGAAGACAGAAAAAGACAAGGCTACCTCTTGAAA...AGACAAAGAAAACCCAGCCAGCAGAATTACAGTATGCCAATGAGCTAGGAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS-3UTR CAA 90 bp AATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGCCATTCAAGAGGTAGCCTaGTCTTTTTCTGTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: NDSPHYQTSVHENRPFTAIQEVA*SFSVFF
Trigger: AAAGAAGACAGAAAAAGACAAGGCTACCTCTTGAAT...GGCCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp CAAGGTGTGGTTTTGTGCAGTCTTTTAATGATAGTCCTCATTATCAGACATCTGCTGTTCCACAGTAGTTaGCTCATCAGTGATTATGTC +
Preference number: 5 (lower is better)
Translates to: QGVVLCSLLMIVLIIRHLLFHSS*LISDYV
Trigger: GACATAATCACTGATGAGCAAACTACTGTGGAACAG...CAGATGTCTGATAATGAGGACTATCATTAAAAGACTGCACAAAACCACACCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp TTAATGATAGTCCTCATTATCAGACATCTGTGCATGAAAATCGTCCTTTCACGGAAGGCTTCACGTCCATaGACACATCTATGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: LMIVLIIRHLCMKIVLSRKASRP*THLCFL
Trigger: CAGAAAACATAGATGTGTCAATGGACGTGAAGCCTT...CCGTGAAAGGACGATTTTCATGCACAGATGTCTGATAATGAGGACTATCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp ATATATCACAACAATATTCCACACAGCACAGCCAGCCAAGAATCCATGAGAAAAAAGGCTTCACGTCCATaGACACATCTATGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: IYHNNIPHSTASQESMRKKASRP*THLCFL
Trigger: CAGAAAACATAGATGTGTCAATGGACGTGAAGCCTT...TTTTCTCATGGATTCTTGGCTGGCTGTGCTGTGTGGAATATTGTTGTGATATAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286196.9
ENST00000432684.6
CDS-3UTR CAA 90 bp TCAATCCTGTCAAAAGCTGAAATTGTACTCAGAGCCAAAAGCAAGTACAGAAGAATTGTTGCAGAAGGTTaGAGAGGTTGGATAGCTGAT +
Preference number: 5 (lower is better)
Translates to: SILSKAEIVLRAKSKYRRIVAEG*RGWIAD
Trigger: ATCAGCTATCCAACCTCTCAAACCTTCTGCAACAAT...TCTTCTGTACTTGCTTTTGGCTCTGAGTACAATTTCAGCTTTTGACAGGATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286196.9
CDS-3UTR CAA 90 bp ATACAAAGGCAACTATGCCCATGGCAGTTACATATTATCAATGTAGCCAGCTTTAGTCTTCTCCTCAACTaGAGCTTTAGGGTCTCATAT +
Preference number: 5 (lower is better)
Translates to: IQRQLCPWQLHIINVASFSLLLN*SFRVSY
Trigger: ATATGAGACCCTAAAGCTCAAGTTGAGGAGAAGACT...AAAGCTGGCTACATTGATAATATGTAACTGCCATGGGCATAGTTGCCTTTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp AATGTCCCCGTTTTAAGGTTCATAACCTTAATCATATCTGCAAATCCCTTTGGCAGGATGCCTTCAGAATaGCCAGCAAATTCACAATTC +
Preference number: 5 (lower is better)
Translates to: NVPVLRFITLIISANPFGRMPSE*PANSQF
Trigger: GAATTGTGAATTTGCTGGCAATTCTGAAGGCATCCT...GCCAAAGGGATTTGCAGATATGATTAAGGTTATGAACCTTAAAACGGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTAGGATGCCTTCAGAATaGCCAGCAAATTCACAATTC +
Preference number: 5 (lower is better)
Translates to: LISPYTYPKGRVNCYIQARMPSE*PANSQF
Trigger: GAATTGTGAATTTGCTGGCAATTCTGAAGGCATCCT...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp GAGGGAGACTCTCTGAAAGAAAATGATGTTTATTCAGGAGTAGGCATTGCAATATTCTCACATTTCTCTTaGATGACACGGCTCAAGTGT +
Preference number: 5 (lower is better)
Translates to: EGDSLKENDVYSGVGIAIFSHFS*MTRLKC
Trigger: ACACTTGAGCCGTGTCATCAAAGAGAAATGTGAGAA...TATTGCAATGCCTACTCCTGAATAAACATCATTTTCTTTCAGAGAGTCTCCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp TCAGGTTGTGATGGCCTTTGTGCAAGGTGTGGTTTTGTGCAGTCTTTTAATGATCTTCCCCAGCTCTATTaGTTAGGATTTTTAACACAA +
Preference number: 5 (lower is better)
Translates to: SGCDGLCARCGFVQSFNDLPQLY*LGFLTQ
Trigger: TTGTGTTAAAAATCCTAACAAATAGAGCTGGGGAAG...ATCATTAAAAGACTGCACAAAACCACACCTTGCACAAAGGCCATCACAACCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp ATAATGTTCACTCCAAATTTAGACCTATTGTCAGGGTCAACTGTCTCTATCATCTATCCAAGCTACTTCTaGGCATATCCTTGTCAGCCT +
Preference number: 5 (lower is better)
Translates to: IMFTPNLDLLSGSTVSIIYPSYF*AYPCQP
Trigger: AGGCTGACAAGGATATGCCAAGAAGTAGCTTGGATA...GATGATAGAGACAGTTGACCCTGACAATAGGTCTAAATTTGGAGTGAACATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp GCAGTGAATACAGACTGCTGTTCCACAGTAGTTTGCTCATCAGTGATTATGTCTTTTCAAGAGGTAGCCTaGTCTTTTTCTGTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: AVNTDCCSTVVCSSVIMSFQEVA*SFSVFF
Trigger: AAAGAAGACAGAAAAAGACAAGGCTACCTCTTGAAA...AGACATAATCACTGATGAGCAAACTACTGTGGAACAGCAGTCTGTATTCACTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432684.6
ENST00000444047.6
CDS TCA 90 bp CCAGAAATCCAGACAGGCTGTATCTATGCTCCTATGAGCAAAGCATaGGTGCACCCATTTCCCATCAATATTGGATTTTATAATTTGAAA +
Preference number: 5 (lower is better)
Translates to: PEIQTGCIYAPMSKA*VHPFPINIGFYNLK
Trigger: TTTCAAATTATAAAATCCAATATTGATGGGAAATGGGTGCACTCATGCTTTGCTCATAGGAGCATAGATACAGCCTGTCTGGATTTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480124.1
CDS-3UTR CAA 90 bp TCCAGCCTTACAAACAGCAAAAGAGATTCCCAGTATAATGTTCACTCCAAATTTTCTACTCCTAGCTCATaGGCATACTGTAATTCTGCT +
Preference number: 5 (lower is better)
Translates to: SSLTNSKRDSQYNVHSKFSTPSS*AYCNSA
Trigger: AGCAGAATTACAGTATGCCAATGAGCTAGGAGTAGA...AAATTTGGAGTGAACATTATACTGGGAATCTCTTTTGCTGTTTGTAAGGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp CTTATATCCCCATACACATATCCTAAAGGCAGAGTTAACTGCTATATCCAAGCTTGTCAAAAGCTGAAATaGTACTCAGAGCCAAAAGCA +
Preference number: 5 (lower is better)
Translates to: LISPYTYPKGRVNCYIQACQKLK*YSEPKA
Trigger: TGCTTTTGGCTCTGAGTACAATTTCAGCTTTTGACA...AGCTTGGATATAGCAGTTAACTCTGCCTTTAGGATATGTGTATGGGGATATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp TCCAGCCTTACAAACAGCAAAAGAGATTCCCAGTATAATGTTCACTCCAAATTTCCAAATTTAGACCTATaGTCAGGGTCAACTGTCTCT +
Preference number: 5 (lower is better)
Translates to: SSLTNSKRDSQYNVHSKFPNLDL*SGSTVS
Trigger: AGAGACAGTTGACCCTGACAATAGGTCTAAATTTGG...AAATTTGGAGTGAACATTATACTGGGAATCTCTTTTGCTGTTTGTAAGGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp ATAATGTTCACTCCAAATTTAGACCTATTGTCAGGGTCAACTGTCTCTATCATCCCAAATTTAGACCTATaGTCAGGGTCAACTGTCTCT +
Preference number: 5 (lower is better)
Translates to: IMFTPNLDLLSGSTVSIIPNLDL*SGSTVS
Trigger: AGAGACAGTTGACCCTGACAATAGGTCTAAATTTGG...GATGATAGAGACAGTTGACCCTGACAATAGGTCTAAATTTGGAGTGAACATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGGGAGGATTTGTTTCCTaGCTCATTTGGGATACTCAT +
Preference number: 5 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQGGFVS*LIWDTH
Trigger: ATGAGTATCCCAAATGAGCAAGGAAACAAATCCTCC...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp TTCAGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTGCTGTTGTTCACACAAAAACTaGCACATGAATGTCCACAGC +
Preference number: 5 (lower is better)
Translates to: FRFILCGVLITAPHETCCCSHKN*HMNVHS
Trigger: GCTGTGGACATTCATGTGCAAGTTTTTGTGTGAACA...ACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp TTCAGATTTATACTATGTGGTGTGTTAATTACTGCACCCCATGAAACTTGCTGTTCAATAACAAGGATGTaGCCAGTTGGACATTGGACA +
Preference number: 5 (lower is better)
Translates to: FRFILCGVLITAPHETCCSITRM*PVGHWT
Trigger: TGTCCAATGTCCAACTGGCAACATCCTTGTTATTGA...ACAGCAAGTTTCATGGGGTGCAGTAATTAACACACCACATAGTATAAATCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp GAGGGAGACTCTCTGAAAGAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAATTCAAGAGGTAGCCTaGTCTTTTTCTGTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: EGDSLKENDVYSGVGIAIIQEVA*SFSVFF
Trigger: AAAGAAGACAGAAAAAGACAAGGCTACCTCTTGAAT...TATTGCAATGCCTACTCCTGAATAAACATCATTTTCTTTCAGAGAGTCTCCCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp GAGGGAGACTCTCTGAAAGAAAATGATGTTTATTCAGGAGTAGGCATTGCAATATTGAGAGAATTATCCTaGGCTACAAGGATCAATAAC +
Preference number: 5 (lower is better)
Translates to: EGDSLKENDVYSGVGIAILRELS*ATRINN
Trigger: GTTATTGATCCTTGTAGCCAAGGATAATTCTCTCAA...TATTGCAATGCCTACTCCTGAATAAACATCATTTTCTTTCAGAGAGTCTCCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp GAAAATGATGTTTATTCAGGAGTAGGCATTGCAATAAGAATACAAGTGCCACAGGTCTCTATCATCAATTaGTCAATCCTCTTCTGTTCT +
Preference number: 5 (lower is better)
Translates to: ENDVYSGVGIAIRIQVPQVSIIN*SILFCS
Trigger: AGAACAGAAGAGGATTGACAAATTGATGATAGAGAC...CTGTGGCACTTGTATTCTTATTGCAATGCCTACTCCTGAATAAACATCATTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS-3UTR CAA 90 bp ATAATGTTCACTCCAAATTTAGACCTATTGTCAGGGTCAACTGTCTCTATCATCCTTCCCCAGCTCTATTaGTTAGGATTTTTAACACAA +
Preference number: 5 (lower is better)
Translates to: IMFTPNLDLLSGSTVSIILPQLY*LGFLTQ
Trigger: TTGTGTTAAAAATCCTAACAAATAGAGCTGGGGAAG...GATGATAGAGACAGTTGACCCTGACAATAGGTCTAAATTTGGAGTGAACATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000409883.7
CDS GCA 72 bp CCACCCCTCCCGGCTCGGTCGCGCGCGCAGGCGCAATaGGTCATCGGGCCGCGCCGCCTGGCTAGTACCCCG +
Preference number: 6 (lower is better)
Translates to: PPLPARSRAQAQ*VIGPRRLASTP
Trigger: CGGGGTACTAGCCAGGCGGCGCGGCCCGATGACGCATTGCGCCTGCGCGCGCGACCGAGCCGGGAGGGGTGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409444.6
CDS CCA 72 bp GCGCGCAGGCGCAATGCGTCATCGGGCCGCGCCGCCTaGCTAGTACCCCGCGCGCAGCGCCCTGCGGGGATG +
Preference number: 6 (lower is better)
Translates to: ARRRNASSGRAA*LVPRAQRPAGM
Trigger: CATCCCCGCAGGGCGCTGCGCGCGGGGTACTAGCCAGGCGGCGCGGCCCGATGACGCATTGCGCCTGCGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409444.6
CDS CCA 72 bp AGCGGCCTCCGGGACCTGTGGGACGCCGGGGCTTCGTaGCGCCTGGCGAGGCAGCCGCCCCCTGAGCCAGGT +
Preference number: 6 (lower is better)
Translates to: SGLRDLWDAGAS*RLARQPPPEPG
Trigger: ACCTGGCTCAGGGGGCGGCTGCCTCGCCAGGCGCCACGAAGCCCCGGCGTCCCACAGGTCCCGGAGGCCGCT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432684.6
CDS TCA 72 bp GTACCCCGCGCGCAGCGCCCTGCGGGGATGTTGCGGTaGGAGGCGTGCAGGGACCTGGATTGGCCAGTCCAG +
Preference number: 6 (lower is better)
Translates to: VPRAQRPAGMLR*EACRDLDWPVQ
Trigger: CTGGACTGGCCAATCCAGGTCCCTGCACGCCTCTCACCGCAACATCCCCGCAGGGCGCTGCGCGCGGGGTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409444.6
CDS CCA 72 bp CTGCGGGGATGTTGCGGTGAGAGGCGTGCAGGGACCTaGATTGGCCAGTCCAGACTAGCCCTGCCAAAAAGG +
Preference number: 6 (lower is better)
Translates to: LRGCCGERRAGT*IGQSRLALPKR
Trigger: CCTTTTTGGCAGGGCTAGTCTGGACTGGCCAATCCAGGTCCCTGCACGCCTCTCACCGCAACATCCCCGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409444.6
CDS TCA 72 bp GGCTCATTGCCCTCAGAGGGCCTTCGACCAGCAGTCTaGGCAAGGCCTTCCAAAGAAGCACTTGCTGGTGTG +
Preference number: 6 (lower is better)
Translates to: GSLPSEGLRPAV*ARPSKEALAGV
Trigger: CACACCAGCAAGTGCTTCTTTGGAAGGCCTTGCTCAGACTGCTGGTCGAAGGCCCTCTGAGGGCAATGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000286196.9
ENST00000409444.6
ENST00000409883.7
ENST00000432684.6
ENST00000444047.6
ENST00000480124.1
ENST00000489550.5
ENST00000621467.4
CDS TCA 72 bp AGAAGAAGAAGACACACCAGAGCTCTCTCTGCCACATaGCGACACAGTGGCAGCTGTCGGCAAGCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: RRRRHTRALSAT*RHSGSCRQARK
Trigger: CTTCCTGGCTTGCCGACAGCTGCCACTGTGTCGTCATGTGGCAGAGAGAGCTCTGGTGTGTCTTCTTCTTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466839.5
CDS CCA 72 bp ACGACTAAGTGGAATATCATCTTGACTTGGCACAGGTaGAAGAGCTCGTGGAGGACGCAGGTGGCCCTCCTC +
Preference number: 6 (lower is better)
Translates to: TTKWNIILTWHR*KSSWRTQVALL
Trigger: GAGGAGGGCCACCTGCGTCCTCCACGAGCTCTTCCACCTGTGCCAAGTCAAGATGATATTCCACTTAGTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409883.7
ENST00000432684.6
ENST00000444047.6
CDS GCA 72 bp GCAAGCCAGGAAGGGGCCTTCTCCAGTAACCTAATCTaGTGGAACCTTGTCTTGCACTTCCTAGCTTTAGGA +
Preference number: 6 (lower is better)
Translates to: ASQEGAFSSNLI*WNLVLHFLALG
Trigger: TCCTAAAGCTAGGAAGTGCAAGACAAGGTTCCAGCAGATTAGGTTACTGGAGAAGGCCCCTTCCTGGCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466839.5
CDS CCA 72 bp ACGACTAAGTGGAATATCATCTTGACTTGGCACAGGTaGAAGAGCTCGTGGAGGACGCACAGGATTCTTCCC +
Preference number: 6 (lower is better)
Translates to: TTKWNIILTWHR*KSSWRTHRILP
Trigger: GGGAAGAATCCTGTGCGTCCTCCACGAGCTCTTCCACCTGTGCCAAGTCAAGATGATATTCCACTTAGTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409444.6
ENST00000463205.2
CDS CCA 72 bp AGCCAGGAAGGGGCCTTCTCCAGTAACCTAATCTGCTaGAACCTTGTCTTGCACTTCCTAGCTTTAGGAACT +
Preference number: 6 (lower is better)
Translates to: SQEGAFSSNLIC*NLVLHFLALGT
Trigger: AGTTCCTAAAGCTAGGAAGTGCAAGACAAGGTTCCAGCAGATTAGGTTACTGGAGAAGGCCCCTTCCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466839.5
CDS CCA 72 bp AACCAGAAGAGCCACCACGAGATTCACCACAATCCATaGCTGGAGAATCTGTTCCTCAATTCCTGCTTCCAG +
Preference number: 6 (lower is better)
Translates to: NQKSHHEIHHNP*LENLFLNSCFQ
Trigger: CTGGAAGCAGGAATTGAGGAACAGATTCTCCAGCCATGGATTGTGGTGAATCTCGTGGTGGCTCTTCTGGTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471318.5
CDS CCA 72 bp AACCAGAAGAGCCACCACGAGATTCACCACAATCCATaGCTGGAGAATCTGTTCCTCAATTCCTGCTTCCCT +
Preference number: 6 (lower is better)
Translates to: NQKSHHEIHHNP*LENLFLNSCFP
Trigger: AGGGAAGCAGGAATTGAGGAACAGATTCTCCAGCCATGGATTGTGGTGAATCTCGTGGTGGCTCTTCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495329.1
CDS CCA 72 bp TGCTTCAAACTGGCCTTAATTCTATCCTCAATGAAGTaGAGATTCGGGGCTGCTGGGGCCTTAATTCTCCCT +
Preference number: 6 (lower is better)
Translates to: CFKLALILSSMK*RFGAAGALILP
Trigger: AGGGAGAATTAAGGCCCCAGCAGCCCCGAATCTCCACTTCATTGAGGATAGAATTAAGGCCAGTTTGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463205.2
CDS TCA 72 bp TCCCAGAAATCCAGACAGGCTGTATCTATGCTCCTATaGGCAAAGCATGAGTGCACCCATTTCCCATCAATA +
Preference number: 6 (lower is better)
Translates to: SQKSRQAVSMLL*AKHECTHFPSI
Trigger: TATTGATGGGAAATGGGTGCACTCATGCTTTGCTCATAGGAGCATAGATACAGCCTGTCTGGATTTCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480124.1
CDS CCA 72 bp AATTCTATCCTCAATGAAGTGGAGATTCGGGGCTGCTaGGGCCTTAATTCTCCCTTATCTGTGATGTTTACT +
Preference number: 6 (lower is better)
Translates to: NSILNEVEIRGC*GLNSPLSVMFT
Trigger: AGTAAACATCACAGATAAGGGAGAATTAAGGCCCCAGCAGCCCCGAATCTCCACTTCATTGAGGATAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463205.2
CDS TCA 72 bp CAGACAGGCTGTATCTATGCTCCTATGAGCAAAGCATaGGTGCACCCATTTCCCATCAATATTGGATTTTAT +
Preference number: 6 (lower is better)
Translates to: QTGCIYAPMSKA*VHPFPINIGFY
Trigger: ATAAAATCCAATATTGATGGGAAATGGGTGCACTCATGCTTTGCTCATAGGAGCATAGATACAGCCTGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480124.1