Pregenerated sensors for TMEM230 (Homo sapiens)
Ensembl gene IDs: ENSG00000089063Ensembl transcript IDs: ENST00000379277.6, ENST00000379279.6, ENST00000379283.6, ENST00000379286.6, ENST00000379299.6, ENST00000492419.1, ENST00000612323.4, ENST00000615008.4
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCATGGGGAGTGGTCTGCGCCATTCTCACCATTCACAAGAGGAGTTaGATAGGGGGTAGAGGGCAGCTGGAATTCCTTTGGCCTGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: PWGVVCAILTIHKRS*IGGRGQLEFLWPAP Trigger: AGGAGCAGGCCAAAGGAATTCCAGCTGCCCTCTACCCCCTATGCAACTCCTCTTGTGAATGGTGAGAATGGCGCAGACCACTCCCCATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| 3UTR CCA 90 bp | CACAAGAGGAGTTGCATAGGGGGTAGAGGGCAGCTGGAATTCCTTTaGCCTGCTCCTCTAGGCATATGGAACATTCCCTCCACATATCCT | + |
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Preference number: 1 (lower is better) Translates to: HKRSCIGGRGQLEFL*PAPLGIWNIPSTYP Trigger: AGGATATGTGGAGGGAATGTTCCATATGCCTAGAGGAGCAGGCCAAAGGAATTCCAGCTGCCCTCTACCCCCTATGCAACTCCTCTTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| 3UTR CCA 90 bp | GGTAGAGGGCAGCTGGAATTCCTTTGGCCTGCTCCTCTAGGCATATaGAACATTCCCTCCACATATCCTGCTCTTAGTAGGAGAAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: GRGQLEFLWPAPLGI*NIPSTYPALSRRSS Trigger: AGAGCTTCTCCTACTAAGAGCAGGATATGTGGAGGGAATGTTCCATATGCCTAGAGGAGCAGGCCAAAGGAATTCCAGCTGCCCTCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| 3UTR GCA 90 bp | GGAACATTCCCTCCACATATCCTGCTCTTAGTAGGAGAAGCTCTCTaGTGCATTTTACAATCAGTCATTTTCATGCTGACGTACTTATTC | + |
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Preference number: 1 (lower is better) Translates to: GTFPPHILLLVGEAL*CILQSVIFMLTYLF Trigger: GAATAAGTACGTCAGCATGAAAATGACTGATTGTAAAATGCAGCAGAGAGCTTCTCCTACTAAGAGCAGGATATGTGGAGGGAATGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| 3UTR GCA 90 bp | ACATTCCCTCCACATATCCTGCTCTTAGTAGGAGAAGCTCTCTGCTaGATTTTACAATCAGTCATTTTCATGCTGACGTACTTATTCCTA | + |
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Preference number: 1 (lower is better) Translates to: TFPPHILLLVGEALC*ILQSVIFMLTYLFL Trigger: TAGGAATAAGTACGTCAGCATGAAAATGACTGATTGTAAAATGCAGCAGAGAGCTTCTCCTACTAAGAGCAGGATATGTGGAGGGAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| 3UTR-3UTR CCA 90 bp | GATGTAGTACTGGGCATCCAGCCATCTGTACCACCCTGCAGTCCCTTTGTGAGATGGGGCCATGGGGAGTaGTCTGCGCCATTCTCACCA | + |
|
Preference number: 2 (lower is better) Translates to: DVVLGIQPSVPPCSPFVRWGHGE*SAPFSP Trigger: TGGTGAGAATGGCGCAGACCACTCCCCATGGCCCCA...TCTCACAAAGGGACTGCAGGGTGGTACAGATGGCTGGATGCCCAGTACTACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| 3UTR-3UTR GCA 90 bp | CAAGAACAGCTTGGGGGAAACCACCCCATGATCCAATTACCTCCACCTAGTACCCCATGGGGAGTGGTCTaGGCCATTCTCACCATTCAC | + |
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Preference number: 2 (lower is better) Translates to: QEQLGGNHPMIQLPPPSTPWGVV*AILTIH Trigger: GTGAATGGTGAGAATGGCGCAGACCACTCCCCATGG...GGTACTAGGTGGAGGTAATTGGATCATGGGGTGGTTTCCCCCAAGCTGTTCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| 3UTR-3UTR CCA 90 bp | TCACAAGAACAGCTTGGGGGAAACCACCCCATGATCCAATTACCTCCACCTAGTGGGGTAGAGGGCAGCTaGAATTCCTTTGGCCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: SQEQLGGNHPMIQLPPPSGVEGS*NSFGLL Trigger: GAGCAGGCCAAAGGAATTCCAGCTGCCCTCTACCCC...ACTAGGTGGAGGTAATTGGATCATGGGGTGGTTTCCCCCAAGCTGTTCTTGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| 3UTR-3UTR TCA 90 bp | TCACAAGAACAGCTTGGGGGAAACCACCCCATGATCCAATTACCTCCACCTAGTGTACCAAGGATGGTATaGAGGGGACAGGAATCCTCC | + |
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Preference number: 2 (lower is better) Translates to: SQEQLGGNHPMIQLPPPSVPRMV*RGQESS Trigger: GGAGGATTCCTGTCCCCTTCATACCATCCTTGGTAC...ACTAGGTGGAGGTAATTGGATCATGGGGTGGTTTCCCCCAAGCTGTTCTTGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| 3UTR-3UTR CCA 90 bp | TCACAAGAACAGCTTGGGGGAAACCACCCCATGATCCAATTACCTCCACCTAGTCAGCTGGAATTCCTTTaGCCTGCTCCTCTAGGCATA | + |
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Preference number: 2 (lower is better) Translates to: SQEQLGGNHPMIQLPPPSQLEFL*PAPLGI Trigger: TATGCCTAGAGGAGCAGGCCAAAGGAATTCCAGCTG...ACTAGGTGGAGGTAATTGGATCATGGGGTGGTTTCCCCCAAGCTGTTCTTGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| 3UTR-3UTR CCA 90 bp | TCACAAGAACAGCTTGGGGGAAACCACCCCATGATCCAATTACCTCCACCTAGTTCTCAGTACCAAGGATaGTATGAAGGGGACAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: SQEQLGGNHPMIQLPPPSSQYQG*YEGDRN Trigger: ATTCCTGTCCCCTTCATACCATCCTTGGTACTGAGA...ACTAGGTGGAGGTAATTGGATCATGGGGTGGTTTCCCCCAAGCTGTTCTTGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| 3UTR-3UTR TCA 90 bp | ACCTCCTTTGATACATGGGAATTACAGGGATTACAATTCAAAGTGAGATTCGGGCCTGCAGTCCCTTTGTaGGAATATGAGCATCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: TSFDTWELQGLQFKVRFGPAVPL*EYEHPS Trigger: ACTGGGATGCTCATATTCTCACAAAGGGACTGCAGG...CCCGAATCTCACTTTGAATTGTAATCCCTGTAATTCCCATGTATCAAAGGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| 3UTR-3UTR GCA 90 bp | TATCCAGCGGTTTTATTACTCATCCAGCTAAGGTTCAGTGGTTCTATTACTAAAATTCACAAGAGGAGTTaGATAGGGGGTAGAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: YPAVLLLIQLRFSGSITKIHKRS*IGGRGQ Trigger: CTGCCCTCTACCCCCTATGCAACTCCTCTTGTGAAT...TTTAGTAATAGAACCACTGAACCTTAGCTGGATGAGTAATAAAACCGCTGGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| 3UTR-3UTR CCA 90 bp | ACCTCCTTTGATACATGGGAATTACAGGGATTACAATTCAAAGTGAGATTCGGGGCTCCTCTAGGCATATaGAACATTCCCTCCACATAT | + |
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Preference number: 2 (lower is better) Translates to: TSFDTWELQGLQFKVRFGAPLGI*NIPSTY Trigger: ATATGTGGAGGGAATGTTCCATATGCCTAGAGGAGC...CCCGAATCTCACTTTGAATTGTAATCCCTGTAATTCCCATGTATCAAAGGAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| 3UTR GCA 72 bp | GTGGTCTGCGCCATTCTCACCATTCACAAGAGGAGTTaGATAGGGGGTAGAGGGCAGCTGGAATTCCTTTGG | + |
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Preference number: 3 (lower is better) Translates to: VVCAILTIHKRS*IGGRGQLEFLW Trigger: CCAAAGGAATTCCAGCTGCCCTCTACCCCCTATGCAACTCCTCTTGTGAATGGTGAGAATGGCGCAGACCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| 3UTR CCA 72 bp | AGTTGCATAGGGGGTAGAGGGCAGCTGGAATTCCTTTaGCCTGCTCCTCTAGGCATATGGAACATTCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: SCIGGRGQLEFL*PAPLGIWNIPS Trigger: GGAGGGAATGTTCCATATGCCTAGAGGAGCAGGCCAAAGGAATTCCAGCTGCCCTCTACCCCCTATGCAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| 3UTR TCA 72 bp | GCATCCAGCCATCTGTACCACCCTGCAGTCCCTTTGTaGGAATATGAGCATCCCAGTCTCTTCAGCATCGCT | + |
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Preference number: 3 (lower is better) Translates to: ASSHLYHPAVPL*EYEHPSLFSIA Trigger: AGCGATGCTGAAGAGACTGGGATGCTCATATTCTCACAAAGGGACTGCAGGGTGGTACAGATGGCTGGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| 3UTR-3UTR CAA 90 bp | AGTCTCTTCAGCATCGCTCTCAGTACCAAGGATGGTATGAAGGGGACAGGAATCGCAGCTGGAATTCCTTaGGCCTGCTCCTCTAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: SLFSIALSTKDGMKGTGIAAGIP*ACSSRH Trigger: ATGCCTAGAGGAGCAGGCCAAAGGAATTCCAGCTGC...GATTCCTGTCCCCTTCATACCATCCTTGGTACTGAGAGCGATGCTGAAGAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| 3UTR-3UTR CAA 90 bp | AGCGCACCAGGACAGAGTGAGTGCAAGCAGGGGAAATGCCAGATGCTTATAAAACACCTAGTACCTCCTTaGATACATGGGAATTACAGG | + |
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Preference number: 3 (lower is better) Translates to: SAPGQSECKQGKCQMLIKHLVPP*IHGNYR Trigger: CCTGTAATTCCCATGTATCAAAGGAGGTACTAGGTG...TTTTATAAGCATCTGGCATTTCCCCTGCTTGCACTCACTCTGTCCTGGTGCGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| 3UTR GCA 72 bp | CCTCCACATATCCTGCTCTTAGTAGGAGAAGCTCTCTaGTGCATTTTACAATCAGTCATTTTCATGCTGACG | + |
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Preference number: 3 (lower is better) Translates to: PPHILLLVGEAL*CILQSVIFMLT Trigger: CGTCAGCATGAAAATGACTGATTGTAAAATGCAGCAGAGAGCTTCTCCTACTAAGAGCAGGATATGTGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| 3UTR CCA 72 bp | ATCCAATTACCTCCACCTAGTACCTCCTTTGATACATaGGAATTACAGGGATTACAATTCAAAGTGAGATTC | + |
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Preference number: 3 (lower is better) Translates to: IQLPPPSTSFDT*ELQGLQFKVRF Trigger: GAATCTCACTTTGAATTGTAATCCCTGTAATTCCCATGTATCAAAGGAGGTACTAGGTGGAGGTAATTGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| CDS-3UTR TCA 90 bp | GATGTAGTACTGGGCATCCAGCCATCTGTACCACCCTGCAGTCCCTTTGTGAGACTGGAAGCCTTGAGCTaGGTCCTCCTTCGGGACTCC | + |
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Preference number: 4 (lower is better) Translates to: DVVLGIQPSVPPCSPFVRLEALS*VLLRDS Trigger: GGAGTCCCGAAGGAGGACTCAGCTCAAGGCTTCCAG...TCTCACAAAGGGACTGCAGGGTGGTACAGATGGCTGGATGCCCAGTACTACATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| CDS-3UTR TCA 90 bp | CAAGAACAGCTTGGGGGAAACCACCCCATGATCCAATTACCTCCACCTAGTACCCGGGACTCCTCCCACTaGTGCCTCCCATCATGTACC | + |
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Preference number: 4 (lower is better) Translates to: QEQLGGNHPMIQLPPPSTRDSSH*CLPSCT Trigger: GGTACATGATGGGAGGCATCAGTGGGAGGAGTCCCG...GGTACTAGGTGGAGGTAATTGGATCATGGGGTGGTTTCCCCCAAGCTGTTCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| CDS-3UTR CCA 90 bp | CAAGAACAGCTTGGGGGAAACCACCCCATGATCCAATTACCTCCACCTAGTACCCCTCAGGAACAGAGGTaGGGCCATGGGGAGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: QEQLGGNHPMIQLPPPSTPQEQR*GHGEWS Trigger: AGACCACTCCCCATGGCCCCACCTCTGTTCCTGAGG...GGTACTAGGTGGAGGTAATTGGATCATGGGGTGGTTTCCCCCAAGCTGTTCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| CDS-3UTR TCA 90 bp | CTGCAGTCCCTTTGTGAGAATATGAGCATCCCAGTCTCTTCAGCATCGCTCTCATCCTTCTGGAAGCCTTaGGCTGAGTCCTCCTTCGGG | + |
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Preference number: 4 (lower is better) Translates to: LQSLCENMSIPVSSASLSSFWKP*AESSFG Trigger: CCCGAAGGAGGACTCAGCTCAAGGCTTCCAGAAGGA...TGAGAGCGATGCTGAAGAGACTGGGATGCTCATATTCTCACAAAGGGACTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| CDS-3UTR CCA 90 bp | AGGAGTTGCATAGGGGGTAGAGGGCAGCTGGAATTCCTTTGGCCTGCTCCTCTACAGCTGGAATTCCTTTaGCCTGCTCCTCTAGGCATA | + |
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Preference number: 4 (lower is better) Translates to: RSCIGGRGQLEFLWPAPLQLEFL*PAPLGI Trigger: TATGCCTAGAGGAGCAGGCCAAAGGAATTCCAGCTG...TAGAGGAGCAGGCCAAAGGAATTCCAGCTGCCCTCTACCCCCTATGCAACTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| CDS-3UTR CCA 90 bp | AGGAGTTGCATAGGGGGTAGAGGGCAGCTGGAATTCCTTTGGCCTGCTCCTCTATCTCAGTACCAAGGATaGTATGAAGGGGACAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: RSCIGGRGQLEFLWPAPLSQYQG*YEGDRN Trigger: ATTCCTGTCCCCTTCATACCATCCTTGGTACTGAGA...TAGAGGAGCAGGCCAAAGGAATTCCAGCTGCCCTCTACCCCCTATGCAACTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| CDS-3UTR TCA 90 bp | AGTCTCTTCAGCATCGCTCTCAGTACCAAGGATGGTATGAAGGGGACAGGAATCCCTGCAGTCCCTTTGTaGGAATATGAGCATCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: SLFSIALSTKDGMKGTGIPAVPL*EYEHPS Trigger: ACTGGGATGCTCATATTCTCACAAAGGGACTGCAGG...GATTCCTGTCCCCTTCATACCATCCTTGGTACTGAGAGCGATGCTGAAGAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| CDS-3UTR GCA 90 bp | CAAGAACAGCTTGGGGGAAACCACCCCATGATCCAATTACCTCCACCTAGTACCGGAATTCCTTTGGCCTaGTCCTCTAGGCATATGGAA | + |
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Preference number: 4 (lower is better) Translates to: QEQLGGNHPMIQLPPPSTGIPLA*SSRHME Trigger: TTCCATATGCCTAGAGGAGCAGGCCAAAGGAATTCC...GGTACTAGGTGGAGGTAATTGGATCATGGGGTGGTTTCCCCCAAGCTGTTCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| CDS-3UTR GCA 90 bp | TCACAAGAACAGCTTGGGGGAAACCACCCCATGATCCAATTACCTCCACCTAGTATTCACAAGAGGAGTTaGATAGGGGGTAGAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SQEQLGGNHPMIQLPPPSIHKRS*IGGRGQ Trigger: CTGCCCTCTACCCCCTATGCAACTCCTCTTGTGAAT...ACTAGGTGGAGGTAATTGGATCATGGGGTGGTTTCCCCCAAGCTGTTCTTGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| CDS-3UTR TCA 90 bp | GGCATATGGAACATTCCCTCCACATATCCTGCTCTTAGTAGGAGAAGCTCTCTGTTTCTTTTGTTCCCGTaGGGTGGATTCGAGACTCCC | + |
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Preference number: 4 (lower is better) Translates to: GIWNIPSTYPALSRRSSLFLLFP*GGFETP Trigger: GGGAGTCTCGAATCCACCTCACGGGAACAAAAGAAA...CAGAGAGCTTCTCCTACTAAGAGCAGGATATGTGGAGGGAATGTTCCATATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| CDS-3UTR CCA 90 bp | AGTCTCTTCAGCATCGCTCTCAGTACCAAGGATGGTATGAAGGGGACAGGAATCAAAGTGAGATTCGGGTaGGGACACAGAGCCAAATCA | + |
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Preference number: 4 (lower is better) Translates to: SLFSIALSTKDGMKGTGIKVRFG*GHRAKS Trigger: TGATTTGGCTCTGTGTCCCCACCCGAATCTCACTTT...GATTCCTGTCCCCTTCATACCATCCTTGGTACTGAGAGCGATGCTGAAGAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| CDS-3UTR TCA 90 bp | AGCGCACCAGGACAGAGTGAGTGCAAGCAGGGGAAATGCCAGATGCTTATAAAAGATTACAATTCAAAGTaGGATTCGGGTGGGGACACA | + |
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Preference number: 4 (lower is better) Translates to: SAPGQSECKQGKCQMLIKDYNSK*DSGGDT Trigger: TGTGTCCCCACCCGAATCTCACTTTGAATTGTAATC...TTTTATAAGCATCTGGCATTTCCCCTGCTTGCACTCACTCTGTCCTGGTGCGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| CDS-3UTR CCA 90 bp | CTAGGCATATGGAACATTCCCTCCACATATCCTGCTCTTAGTAGGAGAAGCTCTTTTGTTCCCGTGAGGTaGATTCGAGACTCCCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: LGIWNIPSTYPALSRRSSFVPVR*IRDSLC Trigger: GCAAAGGGAGTCTCGAATCCACCTCACGGGAACAAA...AGAGCTTCTCCTACTAAGAGCAGGATATGTGGAGGGAATGTTCCATATGCCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| CDS-3UTR CCA 90 bp | ACCTCCTTTGATACATGGGAATTACAGGGATTACAATTCAAAGTGAGATTCGGGGGGGTAGAGGGCAGCTaGAATTCCTTTGGCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: TSFDTWELQGLQFKVRFGGVEGS*NSFGLL Trigger: GAGCAGGCCAAAGGAATTCCAGCTGCCCTCTACCCC...CCCGAATCTCACTTTGAATTGTAATCCCTGTAATTCCCATGTATCAAAGGAGGT 48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| CDS-3UTR GCA 90 bp | CTGCAGTCCCTTTGTGAGAATATGAGCATCCCAGTCTCTTCAGCATCGCTCTCATGCAAGCAGGGGAAATaGCAGATGCTTATAAAACCA | + |
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Preference number: 4 (lower is better) Translates to: LQSLCENMSIPVSSASLSCKQGK*QMLIKP Trigger: TGGTTTTATAAGCATCTGGCATTTCCCCTGCTTGCA...TGAGAGCGATGCTGAAGAGACTGGGATGCTCATATTCTCACAAAGGGACTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| CDS-3UTR CCA 90 bp | TATCCAGCGGTTTTATTACTCATCCAGCTAAGGTTCAGTGGTTCTATTACTAAATGGGGCCATGGGGAGTaGTCTGCGCCATTCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: YPAVLLLIQLRFSGSITKWGHGE*SAPFSP Trigger: TGGTGAGAATGGCGCAGACCACTCCCCATGGCCCCA...TTTAGTAATAGAACCACTGAACCTTAGCTGGATGAGTAATAAAACCGCTGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| CDS-3UTR CCA 90 bp | CTAGGCATATGGAACATTCCCTCCACATATCCTGCTCTTAGTAGGAGAAGCTCTGCTCCTCTAGGCATATaGAACATTCCCTCCACATAT | + |
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Preference number: 4 (lower is better) Translates to: LGIWNIPSTYPALSRRSSAPLGI*NIPSTY Trigger: ATATGTGGAGGGAATGTTCCATATGCCTAGAGGAGC...AGAGCTTCTCCTACTAAGAGCAGGATATGTGGAGGGAATGTTCCATATGCCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| CDS-3UTR CCA 90 bp | CAAGAACAGCTTGGGGGAAACCACCCCATGATCCAATTACCTCCACCTAGTACCACCTCCTTTGATACATaGGAATTACAGGGATTACAA | + |
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Preference number: 4 (lower is better) Translates to: QEQLGGNHPMIQLPPPSTTSFDT*ELQGLQ Trigger: TTGTAATCCCTGTAATTCCCATGTATCAAAGGAGGT...GGTACTAGGTGGAGGTAATTGGATCATGGGGTGGTTTCCCCCAAGCTGTTCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| CDS-3UTR TCA 90 bp | GACATTTTCAGTTTAGCCCTTTTAAGATGCTTATCTCAAATTAGAGGCACCAACGTACCAAGGATGGTATaGAGGGGACAGGAATCCTCC | + |
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Preference number: 4 (lower is better) Translates to: DIFSLALLRCLSQIRGTNVPRMV*RGQESS Trigger: GGAGGATTCCTGTCCCCTTCATACCATCCTTGGTAC...GTTGGTGCCTCTAATTTGAGATAAGCATCTTAAAAGGGCTAAACTGAAAATGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| CDS-3UTR TCA 90 bp | TATCCAGCGGTTTTATTACTCATCCAGCTAAGGTTCAGTGGTTCTATTACTAAACCCTTTGTGAGAATATaGGCATCCCAGTCTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: YPAVLLLIQLRFSGSITKPFVRI*ASQSLQ Trigger: CTGAAGAGACTGGGATGCTCATATTCTCACAAAGGG...TTTAGTAATAGAACCACTGAACCTTAGCTGGATGAGTAATAAAACCGCTGGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| CDS-3UTR CAA 90 bp | CCTTTGGCCTGCTCCTCTAGGCATATGGAACATTCCCTCCACATATCCTGCTCTGCAGCTGGAATTCCTTaGGCCTGCTCCTCTAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: PLACSSRHMEHSLHISCSAAGIP*ACSSRH Trigger: ATGCCTAGAGGAGCAGGCCAAAGGAATTCCAGCTGC...AGAGCAGGATATGTGGAGGGAATGTTCCATATGCCTAGAGGAGCAGGCCAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| CDS CCA 90 bp | CTGATGCCTCCCATCATGTACCCACGGGATGCTGGTAGATGTTTGTaGTCAGCTTTCTTTTGTTCCCGTGAGGTGGATTCGAGACTCCCT | + |
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Preference number: 5 (lower is better) Translates to: LMPPIMYPRDAGRCL*SAFFCSREVDSRLP Trigger: AGGGAGTCTCGAATCCACCTCACGGGAACAAAAGAAAGCTGACCACAAACATCTACCAGCATCCCGTGGGTACATGATGGGAGGCATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000612323.4 ENST00000615008.4 |
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| CDS-3UTR CAA 90 bp | GATGTAGTACTGGGCATCCAGCCATCTGTACCACCCTGCAGTCCCTTTGTGAGACACCTAGTACCTCCTTaGATACATGGGAATTACAGG | + |
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Preference number: 5 (lower is better) Translates to: DVVLGIQPSVPPCSPFVRHLVPP*IHGNYR Trigger: CCTGTAATTCCCATGTATCAAAGGAGGTACTAGGTG...TCTCACAAAGGGACTGCAGGGTGGTACAGATGGCTGGATGCCCAGTACTACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612323.4 |
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| CDS GCA 72 bp | CGCCCAGAGCCCGAGAGGACGGTTCTGTCCCCGCCCTaGCGCACACACGCCTTACCGGAGCGCCGCGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: RPEPERTVLSPP*RTHALPERRAR Trigger: CCTGGCGCGGCGCTCCGGTAAGGCGTGTGTGCGGCAGGGCGGGGACAGAACCGTCCTCTCGGGCTCTGGGCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000379279.6 ENST00000379283.6 ENST00000379286.6 ENST00000379299.6 |
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| CDS CAA 90 bp | CCACTGATGCCTCCCATCATGTACCCACGGGATGCTGGTAGATGTTaGTGGTCAGCTTTCTTTTGTTCCCGTGAGGTGGATTCGAGACTC | + |
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Preference number: 6 (lower is better) Translates to: PLMPPIMYPRDAGRC*WSAFFCSREVDSRL Trigger: GAGTCTCGAATCCACCTCACGGGAACAAAAGAAAGCTGACCACAAACATCTACCAGCATCCCGTGGGTACATGATGGGAGGCATCAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000612323.4 ENST00000615008.4 |
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| CDS TCA 72 bp | CTTAAACCTGCCACGGCCCTCTTCTGCGATTATGGCTaGAAGGGTCTCAGAGCTGAGTTTTCTTCTTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: LKPATALFCDYG*KGLRAEFSSCC Trigger: GCAACAAGAAGAAAACTCAGCTCTGAGACCCTTTCAGCCATAATCGCAGAAGAGGGCCGTGGCAGGTTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492419.1 |
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| CDS CAA 72 bp | TGGGCGACAGAACTAGACTCCATCCGTCTTCAGACCTaGCCAGGGAGAGAAATAAGAACCGACGCGAATTTA | + |
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Preference number: 6 (lower is better) Translates to: WATELDSIRLQT*PGREIRTDANL Trigger: TAAATTCGCGTCGGTTCTTATTTCTCTCCCTGGCAAGGTCTGAAGACGGATGGAGTCTAGTTCTGTCGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379286.6 |
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| CDS CAA 72 bp | GCTGACACAGGTTATTCTCCTACCCGTCTTCAGACCTaGCCAGGGAGAGAAATAAGAACCGACGCGAATTTA | + |
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Preference number: 6 (lower is better) Translates to: ADTGYSPTRLQT*PGREIRTDANL Trigger: TAAATTCGCGTCGGTTCTTATTTCTCTCCCTGGCAAGGTCTGAAGACGGGTAGGAGAATAACCTGTGTCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379299.6 |
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| CDS CAA 90 bp | CTGACACAGCTCTACATACGTTATTCTCCTACCCGTCTTCAGACCTaGCCAGGGAGAGAAATAAGAACCGACGCGAATTTAGACGTAAAA | + |
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Preference number: 6 (lower is better) Translates to: LTQLYIRYSPTRLQT*PGREIRTDANLDVK Trigger: TTTTACGTCTAAATTCGCGTCGGTTCTTATTTCTCTCCCTGGCAAGGTCTGAAGACGGGTAGGAGAATAACGTATGTAGAGCTGTGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379283.6 |
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| CDS CAA 72 bp | CTCTACATACGTTATTCTCCTACCCGTCTTCAGACCTaGCCAGGGAGAGAAATAAGAACCGACGCGAATTTA | + |
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Preference number: 6 (lower is better) Translates to: LYIRYSPTRLQT*PGREIRTDANL Trigger: TAAATTCGCGTCGGTTCTTATTTCTCTCCCTGGCAAGGTCTGAAGACGGGTAGGAGAATAACGTATGTAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379283.6 |
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| CDS CAA 72 bp | TGTTCTAAGTACTTTGTACATACCCGTCTTCAGACCTaGCCAGGGAGAGAAATAAGAACCGACGCGAATTTA | + |
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Preference number: 6 (lower is better) Translates to: CSKYFVHTRLQT*PGREIRTDANL Trigger: TAAATTCGCGTCGGTTCTTATTTCTCTCCCTGGCAAGGTCTGAAGACGGGTATGTACAAAGTACTTAGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379277.6 |
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