Pregenerated sensors for TMEM220 (Homo sapiens)
Ensembl gene IDs: ENSG00000187824Ensembl transcript IDs: ENST00000341871.8, ENST00000455996.6, ENST00000578345.1, ENST00000580787.5
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CTTTCTTTCCAAGACATGCCTGCTCATTTGATTCATCTAGAGTTCTCCTTTAGTGTAGTCGTAGCTTCTTaGGAGGCTGAGGTAGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LSFQDMPAHLIHLEFSFSVVVAS*EAEVGG Trigger: TCCTCCTACCTCAGCCTCCCAAGAAGCTACGACTAC...ACTAAAGGAGAACTCTAGATGAATCAAATGAGCAGGCATGTCTTGGAAAGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCTTAGCCCAAATTACCTaGAATAAACTCCTGGCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: TRPCRKSSGKYQTISYLSLAQIT*NKLLAC Trigger: ACAAGCCAGGAGTTTATTTCAGGTAATTTGGGCTAA...GGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| 3UTR-3UTR CCA 90 bp | TCTAGCCTTTTCCACTACATTATGACACAAGACCCTGCAGAAAGTCGTCTGGAACCTGAAATAAACTCCTaGCTTGTTCCCCTAATGTTT | + |
|
Preference number: 2 (lower is better) Translates to: SSLFHYIMTQDPAESRLEPEINS*LVPLMF Trigger: AAACATTAGGGGAACAAGCCAGGAGTTTATTTCAGG...TTCCAGACGACTTTCTGCAGGGTCTTGTGTCATAATGTAGTGGAAAAGGCTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| 3UTR-3UTR TCA 90 bp | GTAAACATGACTTGGTCAATGGATAGAGCCCACAGGGAATTTGCAAATGAGTCTTTTTCCACTACATTATaGCACAAGACCCTGCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: VNMTWSMDRAHREFANESFSTTL*HKTLQK Trigger: TTTCTGCAGGGTCTTGTGTCATAATGTAGTGGAAAA...AGACTCATTTGCAAATTCCCTGTGGGCTCTATCCATTGACCAAGTCATGTTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGCTTCCCTTTCTTTCCAAGACATGCCTGCTCATTTGATTCATCTAGAGTTCCTGAAATAAACTCCTaGCTTGTTCCCCTAATGTTT | + |
|
Preference number: 2 (lower is better) Translates to: SSFPFFPRHACSFDSSRVPEINS*LVPLMF Trigger: AAACATTAGGGGAACAAGCCAGGAGTTTATTTCAGG...AACTCTAGATGAATCAAATGAGCAGGCATGTCTTGGAAAGAAAGGGAAGCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTTCTTTCCAAGACATGCCTGCTCATTTGATTCATCTAGAGTTCTCCTTTAGTTATGACACAAGACCCTaGAGAAAGTCGTCTGGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: LSFQDMPAHLIHLEFSFSYDTRP*RKSSGK Trigger: TTTTCCAGACGACTTTCTGCAGGGTCTTGTGTCATA...ACTAAAGGAGAACTCTAGATGAATCAAATGAGCAGGCATGTCTTGGAAAGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTTCTTTCCAAGACATGCCTGCTCATTTGATTCATCTAGAGTTCTCCTTTAGTTTAGCCCAAATTACCTaGAATAAACTCCTGGCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: LSFQDMPAHLIHLEFSFSLAQIT*NKLLAC Trigger: ACAAGCCAGGAGTTTATTTCAGGTAATTTGGGCTAA...ACTAAAGGAGAACTCTAGATGAATCAAATGAGCAGGCATGTCTTGGAAAGAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| 3UTR TCA 72 bp | CCTAACCTGTGGAAGGCACTACTCGTTCTTTTTGAGTaGAGTATTTCCCAGATCTCTTTCCTAGATCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: PNLWKALLVLFE*SISQISFLDQK Trigger: TTTCTGATCTAGGAAAGAGATCTGGGAAATACTTCACTCAAAAAGAACGAGTAGTGCCTTCCACAGGTTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| 3UTR CCA 72 bp | ACATTACTGTCTTTAAGCACAGAAGTAAACATGACTTaGTCAATGGATAGAGCCCACAGGGAATTTGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: TLLSLSTEVNMT*SMDRAHREFAN Trigger: ATTTGCAAATTCCCTGTGGGCTCTATCCATTGACCAAGTCATGTTTACTTCTGTGCTTAAAGACAGTAATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCTTGGGGACACTGCCGTaGCCGTCGCTCCGCCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TRPCRKSSGKYQTISYLSLGTLP*PSLRPG Trigger: CCCCGGGCGGAGCGACGGCCACGGCAGTGTCCCCAA...GGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR CCA 90 bp | CAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCGGCCCGCCACAGCGCTaGCGCCATGGCTCGGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QDPAESRLENIRPSLTCPGPPQR*RHGSEN Trigger: GTTCTCCGAGCCATGGCGCCAGCGCTGTGGCGGGCC...GGGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR GCA 90 bp | TCTAGCCTTTTCCACTACATTATGACACAAGACCCTGCAGAAAGTCGTCTGGAAGTGCCTTGGGGACACTaGCGTGGCCGTCGCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLFHYIMTQDPAESRLEVPWGH*RGRRSA Trigger: GGCGGAGCGACGGCCACGGCAGTGTCCCCAAGGCAC...TTCCAGACGACTTTCTGCAGGGTCTTGTGTCATAATGTAGTGGAAAAGGCTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR GCA 90 bp | ACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCGTGCCTTGGGGACACTaGCGTGGCCGTCGCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TRPCRKSSGKYQTISYLSVPWGH*RGRRSA Trigger: GGCGGAGCGACGGCCACGGCAGTGTCCCCAAGGCAC...GGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR CCA 90 bp | ACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCGGCCCGCCACAGCGCTaGCGCCATGGCTCGGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TRPCRKSSGKYQTISYLSGPPQR*RHGSEN Trigger: GTTCTCCGAGCCATGGCGCCAGCGCTGTGGCGGGCC...GGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR TCA 90 bp | ACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCGAAGAAGGCGGCCATaGGTCCGTTGCAGGCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TRPCRKSSGKYQTISYLSRRRRP*VRCRPA Trigger: GGCGGGCCTGCAACGGACTCATGGCCGCCTTCTTCG...GGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR GCA 90 bp | CAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCCCGCCTCGGTTTCGGTaGCTTGGGGACACTGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QDPAESRLENIRPSLTCPPPRFR*LGDTAV Trigger: CACGGCAGTGTCCCCAAGGCACCGAAACCGAGGCGG...GGGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR GCA 90 bp | TCTAGCCTTTTCCACTACATTATGACACAAGACCCTGCAGAAAGTCGTCTGGAAGTCCGCCTTCCTCCTTaGGCGGAGGGACCGAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLFHYIMTQDPAESRLEVRLPP*AEGPRP Trigger: GGGTCTCGGTCCCTCCGCGCAAGGAGGAAGGCGGAC...TTCCAGACGACTTTCTGCAGGGTCTTGTGTCATAATGTAGTGGAAAAGGCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR GCA 90 bp | ACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCGGGGCGGTGAGTCCTaGCACGTACGGTCCGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TRPCRKSSGKYQTISYLSRGGES*HVRSAF Trigger: GAAGGCGGACCGTACGTGGCAGGACTCACCGCCCCG...GGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR GCA 90 bp | TCTAGCCTTTTCCACTACATTATGACACAAGACCCTGCAGAAAGTCGTCTGGAAGTGAGTCCTGCCACGTaGGGGGCGGTGAGTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLFHYIMTQDPAESRLEVSPAT*GAVSPA Trigger: GGCAGGACTCACCGCCCCGCACGTGGCAGGACTCAC...TTCCAGACGACTTTCTGCAGGGTCTTGTGTCATAATGTAGTGGAAAAGGCTAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR CCA 90 bp | TCTAGCCTTTTCCACTACATTATGACACAAGACCCTGCAGAAAGTCGTCTGGAAACAGCGCTGGCGCCATaGCTCGGAGAACACGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: SSLFHYIMTQDPAESRLETALAP*LGEHGA Trigger: CGCGCCGTGTTCTCCGAGCCATGGCGCCAGCGCTGT...TTCCAGACGACTTTCTGCAGGGTCTTGTGTCATAATGTAGTGGAAAAGGCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR TCA 90 bp | ATGACACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTCGAAGAAGGCGGCCATaGGTCCGTTGCAGGCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: MTQDPAESRLENIRPSLTRRRRP*VRCRPA Trigger: GGCGGGCCTGCAACGGACTCATGGCCGCCTTCTTCG...AGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGTGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR GCA 90 bp | ACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCCGCCTCGGTTTCGGTaGCTTGGGGACACTGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TRPCRKSSGKYQTISYLSPPRFR*LGDTAV Trigger: CACGGCAGTGTCCCCAAGGCACCGAAACCGAGGCGG...GGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR CCA 90 bp | CTTTCTTTCCAAGACATGCCTGCTCATTTGATTCATCTAGAGTTCTCCTTTAGTTTGGGGACACTGCCGTaGCCGTCGCTCCGCCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSFQDMPAHLIHLEFSFSLGTLP*PSLRPG Trigger: CCCCGGGCGGAGCGACGGCCACGGCAGTGTCCCCAA...ACTAAAGGAGAACTCTAGATGAATCAAATGAGCAGGCATGTCTTGGAAAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR CCA 90 bp | CAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCTCGGTTTCGGTGCCTTaGGGACACTGCCGTGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: QDPAESRLENIRPSLTCPSVSVP*GHCRGR Trigger: ACGGCCACGGCAGTGTCCCCAAGGCACCGAAACCGA...GGGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR GCA 90 bp | CAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCATTGTGTACACCACCTaGACCAAGGCCGCCAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: QDPAESRLENIRPSLTCPIVYTT*TKAASA Trigger: CGCGCTGGCGGCCTTGGTGCAGGTGGTGTACACAAT...GGGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455996.6 |
||
| CDS-3UTR GCA 90 bp | CTTTCTTTCCAAGACATGCCTGCTCATTTGATTCATCTAGAGTTCTCCTTTAGTGTGAGTCCTGCCACGTaGGGGGCGGTGAGTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSFQDMPAHLIHLEFSFSVSPAT*GAVSPA Trigger: GGCAGGACTCACCGCCCCGCACGTGGCAGGACTCAC...ACTAAAGGAGAACTCTAGATGAATCAAATGAGCAGGCATGTCTTGGAAAGAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCTCTGGGTCATTTACCTaGACCAAGGCCGCCAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: TRPCRKSSGKYQTISYLSSGSFT*TKAASA Trigger: CGCGCTGGCGGCCTTGGTGCAGGTAAATGACCCAGA...GGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR CCA 90 bp | GTAAACATGACTTGGTCAATGGATAGAGCCCACAGGGAATTTGCAAATGAGTCTTCGGTTTCGGTGCCTTaGGGACACTGCCGTGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VNMTWSMDRAHREFANESSVSVP*GHCRGR Trigger: ACGGCCACGGCAGTGTCCCCAAGGCACCGAAACCGA...AGACTCATTTGCAAATTCCCTGTGGGCTCTATCCATTGACCAAGTCATGTTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR TCA 90 bp | CAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCGACTGCAGTGAGCCATaGTCATGCCACTGCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QDPAESRLENIRPSLTCPDCSEP*SCHCTP Trigger: TGGAGTGCAGTGGCATGATCATGGCTCACTGCAGTC...GGGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR TCA 90 bp | CAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCAGGTCAGGACTGCAGTaGGCCATGATCATGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: QDPAESRLENIRPSLTCPRSGLQ*AMIMPL Trigger: CAGTGGCATGATCATGGCTCACTGCAGTCCTGACCT...GGGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR TCA 90 bp | ACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCGACTGCAGTGAGCCATaGTCATGCCACTGCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TRPCRKSSGKYQTISYLSDCSEP*SCHCTP Trigger: TGGAGTGCAGTGGCATGATCATGGCTCACTGCAGTC...GGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR GCA 90 bp | GTGCCTTTTATATGCTTAACTGAAGATGCGAAAGAGACTATGAATAGTCACATACGGGGCGGTGAGTCCTaGCACGTACGGTCCGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VPFICLTEDAKETMNSHIRGGES*HVRSAF Trigger: GAAGGCGGACCGTACGTGGCAGGACTCACCGCCCCG...TATGTGACTATTCATAGTCTCTTTCGCATCTTCAGTTAAGCATATAAAAGGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR CCA 90 bp | CAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCGTAGTCGTAGCTTCTTaGGAGGCTGAGGTAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QDPAESRLENIRPSLTCPVVVAS*EAEVGG Trigger: TCCTCCTACCTCAGCCTCCCAAGAAGCTACGACTAC...GGGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR GCA 90 bp | CAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCAAGCAGGGTCAGTACTaGAGGGATTGTGTACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: QDPAESRLENIRPSLTCPKQGQY*RDCVHH Trigger: GTGGTGTACACAATCCCTGCAGTACTGACCCTGCTT...GGGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR CCA 90 bp | CAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCTTTAGCCGGGCATGGTaGTGCACACTTGTAGTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: QDPAESRLENIRPSLTCPFSRAW*CTLVVV Trigger: TACGACTACAAGTGTGCACCACCATGCCCGGCTAAA...GGGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR GCA 90 bp | TCCAGCTTCCCTTTCTTTCCAAGACATGCCTGCTCATTTGATTCATCTAGAGTTCACCACCCACACCTCTaGATCTGGGTCATTTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSFPFFPRHACSFDSSRVHHPHL*IWVIYL Trigger: CAGGTAAATGACCCAGATGCAGAGGTGTGGGTGGTG...AACTCTAGATGAATCAAATGAGCAGGCATGTCTTGGAAAGAAAGGGAAGCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR GCA 90 bp | TCTAGCCTTTTCCACTACATTATGACACAAGACCCTGCAGAAAGTCGTCTGGAAAAGCAGGGTCAGTACTaGAGGGATTGTGTACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSLFHYIMTQDPAESRLEKQGQY*RDCVHH Trigger: GTGGTGTACACAATCCCTGCAGTACTGACCCTGCTT...TTCCAGACGACTTTCTGCAGGGTCTTGTGTCATAATGTAGTGGAAAAGGCTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR GCA 90 bp | TCTAGCCTTTTCCACTACATTATGACACAAGACCCTGCAGAAAGTCGTCTGGAAGACCAGACAGCTCCCTaGCTTCTTCCTCATGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSLFHYIMTQDPAESRLEDQTAP*LLPHVR Trigger: TCTTACATGAGGAAGAAGGCAGGGAGCTGTCTGGTC...TTCCAGACGACTTTCTGCAGGGTCTTGTGTCATAATGTAGTGGAAAAGGCTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR CCA 90 bp | TCTAGCCTTTTCCACTACATTATGACACAAGACCCTGCAGAAAGTCGTCTGGAACCACACCTCTGCATCTaGGTCATTTACCTGCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSLFHYIMTQDPAESRLEPHLCI*VIYLHQ Trigger: TTGGTGCAGGTAAATGACCCAGATGCAGAGGTGTGG...TTCCAGACGACTTTCTGCAGGGTCTTGTGTCATAATGTAGTGGAAAAGGCTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCTGTCTTGCAGTGAGTTaGCCAAGAGGACCGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: TRPCRKSSGKYQTISYLSCLAVS*PRGPHF Trigger: GAAATGCGGTCCTCTTGGCCAACTCACTGCAAGACA...GGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR CCA 90 bp | TCTAGCCTTTTCCACTACATTATGACACAAGACCCTGCAGAAAGTCGTCTGGAATGTCTTGCAGTGAGTTaGCCAAGAGGACCGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSLFHYIMTQDPAESRLECLAVS*PRGPHF Trigger: GAAATGCGGTCCTCTTGGCCAACTCACTGCAAGACA...TTCCAGACGACTTTCTGCAGGGTCTTGTGTCATAATGTAGTGGAAAAGGCTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR TCA 90 bp | ACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCACCAACTGGATTCTTTaGGGAACTGTGGCACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TRPCRKSSGKYQTISYLSTNWIL*GTVAQD Trigger: ATCCTGTGCCACAGTTCCTCAAAGAATCCAGTTGGT...GGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR TCA 90 bp | TCCAGCTTCCCTTTCTTTCCAAGACATGCCTGCTCATTTGATTCATCTAGAGTTACCAACTGGATTCTTTaGGGAACTGTGGCACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSFPFFPRHACSFDSSRVTNWIL*GTVAQD Trigger: ATCCTGTGCCACAGTTCCTCAAAGAATCCAGTTGGT...AACTCTAGATGAATCAAATGAGCAGGCATGTCTTGGAAAGAAAGGGAAGCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR TCA 90 bp | CAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCATGGCAATAGCCAATTaGATTCTTCCACCAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QDPAESRLENIRPSLTCPMAIAN*ILPPTG Trigger: TCCAGTTGGTGGAAGAATTCAATTGGCTATTGCCAT...GGGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR GCA 90 bp | CAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCTATGACACAAGACCCTaGAGAAAGTCGTCTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QDPAESRLENIRPSLTCPYDTRP*RKSSGK Trigger: TTTTCCAGACGACTTTCTGCAGGGTCTTGTGTCATA...GGGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR CCA 90 bp | CAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCTTCTTTGAGGAACTGTaGCACAGGATAATCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: QDPAESRLENIRPSLTCPFFEEL*HRIIHA Trigger: AGCATGGATTATCCTGTGCCACAGTTCCTCAAAGAA...GGGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR TCA 90 bp | CAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCTTTTCCACTACATTATaGCACAAGACCCTGCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QDPAESRLENIRPSLTCPFSTTL*HKTLQK Trigger: TTTCTGCAGGGTCTTGTGTCATAATGTAGTGGAAAA...GGGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR GCA 90 bp | TCTAGCCTTTTCCACTACATTATGACACAAGACCCTGCAGAAAGTCGTCTGGAAGCACAGGATAATCCATaGTGTAATAATCACCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: SSLFHYIMTQDPAESRLEAQDNP*CNNHQT Trigger: GGTCTGGTGATTATTACAGCATGGATTATCCTGTGC...TTCCAGACGACTTTCTGCAGGGTCTTGTGTCATAATGTAGTGGAAAAGGCTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR GCA 90 bp | TCTAGCCTTTTCCACTACATTATGACACAAGACCCTGCAGAAAGTCGTCTGGAATATGACACAAGACCCTaGAGAAAGTCGTCTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSLFHYIMTQDPAESRLEYDTRP*RKSSGK Trigger: TTTTCCAGACGACTTTCTGCAGGGTCTTGTGTCATA...TTCCAGACGACTTTCTGCAGGGTCTTGTGTCATAATGTAGTGGAAAAGGCTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR GCA 90 bp | GTAAACATGACTTGGTCAATGGATAGAGCCCACAGGGAATTTGCAAATGAGTCTTCTCCTTTAGTTCACTaGACTATGCCAGCTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VNMTWSMDRAHREFANESSPLVH*TMPALD Trigger: ATCCAGAGCTGGCATAGTGCAGTGAACTAAAGGAGA...AGACTCATTTGCAAATTCCCTGTGGGCTCTATCCATTGACCAAGTCATGTTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGCCTTTTCCACTACATTATGACACAAGACCCTGCAGAAAGTCGTCTGGAATTCTTTGAGGAACTGTaGCACAGGATAATCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLFHYIMTQDPAESRLEFFEEL*HRIIHA Trigger: AGCATGGATTATCCTGTGCCACAGTTCCTCAAAGAA...TTCCAGACGACTTTCTGCAGGGTCTTGTGTCATAATGTAGTGGAAAAGGCTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR CCA 90 bp | CAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCCCTGAAATAAACTCCTaGCTTGTTCCCCTAATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QDPAESRLENIRPSLTCPPEINS*LVPLMF Trigger: AAACATTAGGGGAACAAGCCAGGAGTTTATTTCAGG...GGGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR CCA 90 bp | CTTTCTTTCCAAGACATGCCTGCTCATTTGATTCATCTAGAGTTCTCCTTTAGTTTTAGCCGGGCATGGTaGTGCACACTTGTAGTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSFQDMPAHLIHLEFSFSFSRAW*CTLVVV Trigger: TACGACTACAAGTGTGCACCACCATGCCCGGCTAAA...ACTAAAGGAGAACTCTAGATGAATCAAATGAGCAGGCATGTCTTGGAAAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGCCTTTTCCACTACATTATGACACAAGACCCTGCAGAAAGTCGTCTGGAAGAAGTAAACATGACTTaGTCAATGGATAGAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSLFHYIMTQDPAESRLEEVNMT*SMDRAH Trigger: GTGGGCTCTATCCATTGACCAAGTCATGTTTACTTC...TTCCAGACGACTTTCTGCAGGGTCTTGTGTCATAATGTAGTGGAAAAGGCTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR TCA 90 bp | TCTAGCCTTTTCCACTACATTATGACACAAGACCCTGCAGAAAGTCGTCTGGAATTAGCCCAAATTACCTaGAATAAACTCCTGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLFHYIMTQDPAESRLELAQIT*NKLLAC Trigger: ACAAGCCAGGAGTTTATTTCAGGTAATTTGGGCTAA...TTCCAGACGACTTTCTGCAGGGTCTTGTGTCATAATGTAGTGGAAAAGGCTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR TCA 90 bp | ACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCTTTTCCACTACATTATaGCACAAGACCCTGCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TRPCRKSSGKYQTISYLSFSTTL*HKTLQK Trigger: TTTCTGCAGGGTCTTGTGTCATAATGTAGTGGAAAA...GGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR GCA 90 bp | ATGACACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTGCACAGGATAATCCATaGTGTAATAATCACCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: MTQDPAESRLENIRPSLTAQDNP*CNNHQT Trigger: GGTCTGGTGATTATTACAGCATGGATTATCCTGTGC...AGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGTGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR CCA 90 bp | CTTTCTTTCCAAGACATGCCTGCTCATTTGATTCATCTAGAGTTCTCCTTTAGTCACTCTCCTAACCTGTaGAAGGCACTACTCGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSFQDMPAHLIHLEFSFSHSPNL*KALLVL Trigger: AAGAACGAGTAGTGCCTTCCACAGGTTAGGAGAGTG...ACTAAAGGAGAACTCTAGATGAATCAAATGAGCAGGCATGTCTTGGAAAGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCGGTATAGCCCTCTCTTaGATGTCTATTTCAGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: TRPCRKSSGKYQTISYLSGIALS*MSISVY Trigger: ATATACTGAAATAGACATTCAAGAGAGGGCTATACC...GGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR TCA 90 bp | ATGACACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTCTCGTTCTTTTTGAGTaGAGTATTTCCCAGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MTQDPAESRLENIRPSLTLVLFE*SISQIS Trigger: AGAGATCTGGGAAATACTTCACTCAAAAAGAACGAG...AGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGTGTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR TCA 90 bp | ATGACACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTCATAATTTCGTAGTCTaGTATGGGAGAGGCATACAT | + |
|
Preference number: 4 (lower is better) Translates to: MTQDPAESRLENIRPSLTHNFVV*YGRGIH Trigger: ATGTATGCCTCTCCCATATCAGACTACGAAATTATG...AGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGTGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR GCA 90 bp | GTGCCTTTTATATGCTTAACTGAAGATGCGAAAGAGACTATGAATAGTCACATAGACCAGACAGCTCCCTaGCTTCTTCCTCATGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VPFICLTEDAKETMNSHIDQTAP*LLPHVR Trigger: TCTTACATGAGGAAGAAGGCAGGGAGCTGTCTGGTC...TATGTGACTATTCATAGTCTCTTTCGCATCTTCAGTTAAGCATATAAAAGGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR GCA 90 bp | ATGACACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTAGTTATAGTCCCTATTaGCTTCTTGTTTGGTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: MTQDPAESRLENIRPSLTSYSPY*LLVWSL Trigger: TAGGGACCAAACAAGAAGGCAATAGGGACTATAACT...AGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGTGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR CCA 90 bp | GTAAACATGACTTGGTCAATGGATAGAGCCCACAGGGAATTTGCAAATGAGTCTCCTGAAATAAACTCCTaGCTTGTTCCCCTAATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VNMTWSMDRAHREFANESPEINS*LVPLMF Trigger: AAACATTAGGGGAACAAGCCAGGAGTTTATTTCAGG...AGACTCATTTGCAAATTCCCTGTGGGCTCTATCCATTGACCAAGTCATGTTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR CCA 90 bp | GTGCCTTTTATATGCTTAACTGAAGATGCGAAAGAGACTATGAATAGTCACATATTTGGGAGGCCAAGGTaGACAGATCGCTTGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: VPFICLTEDAKETMNSHIFGRPR*TDRLNS Trigger: TGAGTTCAAGCGATCTGTCCACCTTGGCCTCCCAAA...TATGTGACTATTCATAGTCTCTTTCGCATCTTCAGTTAAGCATATAAAAGGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR TCA 90 bp | GTAAACATGACTTGGTCAATGGATAGAGCCCACAGGGAATTTGCAAATGAGTCTGGTATAGCCCTCTCTTaGATGTCTATTTCAGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: VNMTWSMDRAHREFANESGIALS*MSISVY Trigger: ATATACTGAAATAGACATTCAAGAGAGGGCTATACC...AGACTCATTTGCAAATTCCCTGTGGGCTCTATCCATTGACCAAGTCATGTTTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR TCA 90 bp | GTAAACATGACTTGGTCAATGGATAGAGCCCACAGGGAATTTGCAAATGAGTCTACTACTCGTTCTTTTTaGGTGAAGTATTTCCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VNMTWSMDRAHREFANESTTRSF*VKYFPD Trigger: ATCTGGGAAATACTTCACTCAAAAAGAACGAGTAGT...AGACTCATTTGCAAATTCCCTGTGGGCTCTATCCATTGACCAAGTCATGTTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGCTTCCCTTTCTTTCCAAGACATGCCTGCTCATTTGATTCATCTAGAGTTATAGCCCCACTCATTTaGACACTAAATTTTCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSFPFFPRHACSFDSSRVIAPLI*TLNFHW Trigger: CCAATGAAAATTTAGTGTCCAAATGAGTGGGGCTAT...AACTCTAGATGAATCAAATGAGCAGGCATGTCTTGGAAAGAAAGGGAAGCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR GCA 90 bp | GTGCCTTTTATATGCTTAACTGAAGATGCGAAAGAGACTATGAATAGTCACATATTTCCAAGACATGCCTaGTCATTTGATTCATCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VPFICLTEDAKETMNSHIFPRHA*SFDSSR Trigger: TCTAGATGAATCAAATGAGCAGGCATGTCTTGGAAA...TATGTGACTATTCATAGTCTCTTTCGCATCTTCAGTTAAGCATATAAAAGGCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR CCA 90 bp | GTGCCTTTTATATGCTTAACTGAAGATGCGAAAGAGACTATGAATAGTCACATATATTGCCTTCTTGTTTaGTCCCTAATTCCTTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: VPFICLTEDAKETMNSHIYCLLV*SLIPLF Trigger: GAATAAAGGAATTAGGGACCAAACAAGAAGGCAATA...TATGTGACTATTCATAGTCTCTTTCGCATCTTCAGTTAAGCATATAAAAGGCAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS GCA 90 bp | ACGGCGCGGGGCGGTGAGTCCTGCCACGTGCGGGGCGGTGAGTCCTaGCACGTACGGTCCGCCTTCCTCCTTGCGCGGAGGGACCGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TARGGESCHVRGGES*HVRSAFLLARRDRD Trigger: GTCTCGGTCCCTCCGCGCAAGGAGGAAGGCGGACCGTACGTGGCAGGACTCACCGCCCCGCACGTGGCAGGACTCACCGCCCCGCGCCGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000341871.8 ENST00000455996.6 ENST00000578345.1 |
||
| CDS TCA 90 bp | TGTACACCACCTGCACCAAGGCCGCCAGCGCGAAGAAGGCGGCCATaGGTCCGTTGCAGGCCCGCCACAGCGCTGGCGCCATGGCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: CTPPAPRPPARRRRP*VRCRPATALAPWLG Trigger: TCCGAGCCATGGCGCCAGCGCTGTGGCGGGCCTGCAACGGACTCATGGCCGCCTTCTTCGCGCTGGCGGCCTTGGTGCAGGTGGTGTACA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000455996.6 ENST00000578345.1 |
||
| CDS TCA 90 bp | GGTCATTTACCTGCACCAAGGCCGCCAGCGCGAAGAAGGCGGCCATaGGTCCGTTGCAGGCCCGCCACAGCGCTGGCGCCATGGCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: GHLPAPRPPARRRRP*VRCRPATALAPWLG Trigger: TCCGAGCCATGGCGCCAGCGCTGTGGCGGGCCTGCAACGGACTCATGGCCGCCTTCTTCGCGCTGGCGGCCTTGGTGCAGGTAAATGACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS TCA 90 bp | GCTGAGGTGAGTGGGTCACTGGAGCCTAGGAGTTTGAAGCTGCAGTaGGCTGTGATCGGGCCACTGCCTTCCAGTCTGGGCAACAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AEVSGSLEPRSLKLQ*AVIGPLPSSLGNKA Trigger: TGCTTTGTTGCCCAGACTGGAAGGCAGTGGCCCGATCACAGCTCACTGCAGCTTCAAACTCCTAGGCTCCAGTGACCCACTCACCTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580787.5 |
||
| CDS-3UTR CAA 90 bp | CAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCGGTCCGCCTTCCTCCTaGCGCGGAGGGACCGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: QDPAESRLENIRPSLTCPGPPSS*RGGTET Trigger: GGTCTCGGTCCCTCCGCGCAAGGAGGAAGGCGGACC...GGGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR CAA 90 bp | CAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCCTCGGTTTCGGTGCCTaGGGGACACTGCCGTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QDPAESRLENIRPSLTCPLGFGA*GTLPWP Trigger: CGGCCACGGCAGTGTCCCCAAGGCACCGAAACCGAG...GGGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR CAA 90 bp | TCTAGCCTTTTCCACTACATTATGACACAAGACCCTGCAGAAAGTCGTCTGGAAGGTCCGCCTTCCTCCTaGCGCGGAGGGACCGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: SSLFHYIMTQDPAESRLEGPPSS*RGGTET Trigger: GGTCTCGGTCCCTCCGCGCAAGGAGGAAGGCGGACC...TTCCAGACGACTTTCTGCAGGGTCTTGTGTCATAATGTAGTGGAAAAGGCTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR CAA 90 bp | ACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCTCGGTTTCGGTGCCTaGGGGACACTGCCGTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TRPCRKSSGKYQTISYLSLGFGA*GTLPWP Trigger: CGGCCACGGCAGTGTCCCCAAGGCACCGAAACCGAG...GGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR CAA 90 bp | ATGACACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTGCGGCCATGAGTCCGTaGCAGGCCCGCCACAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: MTQDPAESRLENIRPSLTAAMSP*QARHSA Trigger: AGCGCTGTGGCGGGCCTGCAACGGACTCATGGCCGC...AGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGTGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR CAA 90 bp | CAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCCTGTCTTGCAGTGAGTaGGCCAAGAGGACCGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: QDPAESRLENIRPSLTCPLSCSE*AKRTAF Trigger: AAATGCGGTCCTCTTGGCCAACTCACTGCAAGACAG...GGGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR CAA 90 bp | TCTAGCCTTTTCCACTACATTATGACACAAGACCCTGCAGAAAGTCGTCTGGAATCAGTACTGCAGGGATaGTGTACACCACCACCCACA | + |
|
Preference number: 5 (lower is better) Translates to: SSLFHYIMTQDPAESRLESVLQG*CTPPPT Trigger: TGTGGGTGGTGGTGTACACAATCCCTGCAGTACTGA...TTCCAGACGACTTTCTGCAGGGTCTTGTGTCATAATGTAGTGGAAAAGGCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR CAA 90 bp | CAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCCACCAACTGGATTCTTaGAGGAACTGTGGCACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QDPAESRLENIRPSLTCPHQLDS*RNCGTG Trigger: TCCTGTGCCACAGTTCCTCAAAGAATCCAGTTGGTG...GGGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR CAA 90 bp | ACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCTGTCTTGCAGTGAGTaGGCCAAGAGGACCGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: TRPCRKSSGKYQTISYLSLSCSE*AKRTAF Trigger: AAATGCGGTCCTCTTGGCCAACTCACTGCAAGACAG...GGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR CAA 90 bp | TCTAGCCTTTTCCACTACATTATGACACAAGACCCTGCAGAAAGTCGTCTGGAATCAGTACTGCAGGGATaGTGTACACCACCTGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SSLFHYIMTQDPAESRLESVLQG*CTPPAP Trigger: TGGTGCAGGTGGTGTACACAATCCCTGCAGTACTGA...TTCCAGACGACTTTCTGCAGGGTCTTGTGTCATAATGTAGTGGAAAAGGCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455996.6 |
||
| CDS-3UTR CAA 90 bp | ATGACACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTCACCAACTGGATTCTTaGAGGAACTGTGGCACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: MTQDPAESRLENIRPSLTHQLDS*RNCGTG Trigger: TCCTGTGCCACAGTTCCTCAAAGAATCCAGTTGGTG...AGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGTGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR CAA 90 bp | CAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCAATGGCAATAGCCAATaGAATTCTTCCACCAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: QDPAESRLENIRPSLTCPNGNSQ*NSSTNW Trigger: CCAGTTGGTGGAAGAATTCAATTGGCTATTGCCATT...GGGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR CAA 90 bp | TCTAGCCTTTTCCACTACATTATGACACAAGACCCTGCAGAAAGTCGTCTGGAAGACATGCCTGCTCATTaGATTCATCTAGAGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSLFHYIMTQDPAESRLEDMPAH*IHLEFS Trigger: GGAGAACTCTAGATGAATCAAATGAGCAGGCATGTC...TTCCAGACGACTTTCTGCAGGGTCTTGTGTCATAATGTAGTGGAAAAGGCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR CAA 90 bp | CAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCGGGTATAGCCCTCTCTaGAATGTCTATTTCAGTATA | + |
|
Preference number: 5 (lower is better) Translates to: QDPAESRLENIRPSLTCPGYSPL*NVYFSI Trigger: TATACTGAAATAGACATTCAAGAGAGGGCTATACCC...GGGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR CAA 90 bp | ACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCGGGTATAGCCCTCTCTaGAATGTCTATTTCAGTATA | + |
|
Preference number: 5 (lower is better) Translates to: TRPCRKSSGKYQTISYLSGYSPL*NVYFSI Trigger: TATACTGAAATAGACATTCAAGAGAGGGCTATACCC...GGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS-3UTR CAA 90 bp | CAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCCTATTGCCTTCTTGTTaGGTCCCTAATTCCTTTATT | + |
|
Preference number: 5 (lower is better) Translates to: QDPAESRLENIRPSLTCPLLPSC*VPNSFI Trigger: AATAAAGGAATTAGGGACCAAACAAGAAGGCAATAG...GGGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR CAA 90 bp | CAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCTATAGCCCCACTCATTaGGACACTAAATTTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: QDPAESRLENIRPSLTCPYSPTH*DTKFSL Trigger: CAATGAAAATTTAGTGTCCAAATGAGTGGGGCTATA...GGGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR CAA 90 bp | ACAAGACCCTGCAGAAAGTCGTCTGGAAAATATCAGACCATCTCTTACTTGTCCCACTACTCGTTCTTTTaGAGTGAAGTATTTCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TRPCRKSSGKYQTISYLSHYSFF*SEVFPR Trigger: TCTGGGAAATACTTCACTCAAAAAGAACGAGTAGTG...GGACAAGTAAGAGATGGTCTGATATTTTCCAGACGACTTTCTGCAGGGTCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS-3UTR CAA 90 bp | GTGCCTTTTATATGCTTAACTGAAGATGCGAAAGAGACTATGAATAGTCACATAAATGGCAATAGCCAATaGAATTCTTCCACCAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: VPFICLTEDAKETMNSHINGNSQ*NSSTNW Trigger: CCAGTTGGTGGAAGAATTCAATTGGCTATTGCCATT...TATGTGACTATTCATAGTCTCTTTCGCATCTTCAGTTAAGCATATAAAAGGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341871.8 |
||
| CDS GCA 72 bp | TGCGCGGAGGGACCGAGACCCCCGCCTCGGTTTCGGTaGCTTGGGGACACTGCCGTGGCCGTCGCTCCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: CAEGPRPPPRFR*LGDTAVAVAPP Trigger: GGGCGGAGCGACGGCCACGGCAGTGTCCCCAAGGCACCGAAACCGAGGCGGGGGTCTCGGTCCCTCCGCGCA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341871.8 ENST00000455996.6 |
||
| CDS CCA 72 bp | GGCGGCCATGAGTCCGTTGCAGGCCCGCCACAGCGCTaGCGCCATGGCTCGGAGAACACGGCGCGGGGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: GGHESVAGPPQR*RHGSENTARGG Trigger: ACCGCCCCGCGCCGTGTTCTCCGAGCCATGGCGCCAGCGCTGTGGCGGGCCTGCAACGGACTCATGGCCGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341871.8 ENST00000455996.6 ENST00000578345.1 |
||
| CDS GCA 72 bp | CGGAGAACACGGCGCGGGGCGGTGAGTCCTGCCACGTaGGGGGCGGTGAGTCCTGCCACGTACGGTCCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RRTRRGAVSPAT*GAVSPATYGPP Trigger: AGGCGGACCGTACGTGGCAGGACTCACCGCCCCGCACGTGGCAGGACTCACCGCCCCGCGCCGTGTTCTCCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000341871.8 ENST00000455996.6 ENST00000578345.1 |
||
| CDS TCA 72 bp | CCTGCACCAAGGCCGCCAGCGCGAAGAAGGCGGCCATaGGTCCGTTGCAGGCCCGCCACAGCGCTGGCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PAPRPPARRRRP*VRCRPATALAP Trigger: TGGCGCCAGCGCTGTGGCGGGCCTGCAACGGACTCATGGCCGCCTTCTTCGCGCTGGCGGCCTTGGTGCAGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000341871.8 ENST00000455996.6 ENST00000578345.1 |
||
| CDS GCA 72 bp | GGCGGTGAGTCCTGCCACGTGCGGGGCGGTGAGTCCTaGCACGTACGGTCCGCCTTCCTCCTTGCGCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GGESCHVRGGES*HVRSAFLLARR Trigger: CCTCCGCGCAAGGAGGAAGGCGGACCGTACGTGGCAGGACTCACCGCCCCGCACGTGGCAGGACTCACCGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341871.8 ENST00000455996.6 ENST00000578345.1 |
||
| CDS CAA 72 bp | AAGGCCGCCAGCGCGAAGAAGGCGGCCATGAGTCCGTaGCAGGCCCGCCACAGCGCTGGCGCCATGGCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: KAASAKKAAMSP*QARHSAGAMAR Trigger: CCGAGCCATGGCGCCAGCGCTGTGGCGGGCCTGCAACGGACTCATGGCCGCCTTCTTCGCGCTGGCGGCCTT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000341871.8 ENST00000455996.6 ENST00000578345.1 |
||
| CDS CAA 90 bp | ACGTGCGGGGCGGTGAGTCCTGCCACGTACGGTCCGCCTTCCTCCTaGCGCGGAGGGACCGAGACCCCCGCCTCGGTTTCGGTGCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: TCGAVSPATYGPPSS*RGGTETPASVSVPW Trigger: CCAAGGCACCGAAACCGAGGCGGGGGTCTCGGTCCCTCCGCGCAAGGAGGAAGGCGGACCGTACGTGGCAGGACTCACCGCCCCGCACGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000341871.8 ENST00000455996.6 ENST00000578345.1 |
||
| CDS CAA 72 bp | GCGGTGAGTCCTGCCACGTACGGTCCGCCTTCCTCCTaGCGCGGAGGGACCGAGACCCCCGCCTCGGTTTCG | + |
|
Preference number: 6 (lower is better) Translates to: AVSPATYGPPSS*RGGTETPASVS Trigger: CGAAACCGAGGCGGGGGTCTCGGTCCCTCCGCGCAAGGAGGAAGGCGGACCGTACGTGGCAGGACTCACCGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000341871.8 ENST00000455996.6 ENST00000578345.1 |
||
| CDS CAA 90 bp | ACCTGCACCAAGGCCGCCAGCGCGAAGAAGGCGGCCATGAGTCCGTaGCAGGCCCGCCACAGCGCTGGCGCCATGGCTCGGAGAACACGG | + |
|
Preference number: 6 (lower is better) Translates to: TCTKAASAKKAAMSP*QARHSAGAMARRTR Trigger: CCGTGTTCTCCGAGCCATGGCGCCAGCGCTGTGGCGGGCCTGCAACGGACTCATGGCCGCCTTCTTCGCGCTGGCGGCCTTGGTGCAGGT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000341871.8 ENST00000455996.6 ENST00000578345.1 |
||
| CDS CCA 72 bp | GGGCAACAAAGCAAGACTCTGCCTTTTGAGGAACTGTaGCACAGGATAATCCATGCTGTAATAATCACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GQQSKTLPFEEL*HRIIHAVIITR Trigger: TCTGGTGATTATTACAGCATGGATTATCCTGTGCCACAGTTCCTCAAAAGGCAGAGTCTTGCTTTGTTGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580787.5 |
||