RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM219 (Homo sapiens)

Ensembl gene IDs: ENSG00000149932

Ensembl transcript IDs: ENST00000279396.11, ENST00000414689.6, ENST00000561899.6, ENST00000566848.5, ENST00000569445.2, ENST00000569481.1, ENST00000570255.6, ENST00000575829.6

Found 228 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AATGCTGACGGTGTCAAATTGTTCCCAGTCCCTAAGGGAGAGCTGTaGTTGAAGAGGTTCTCGGGGACTCAGAAGCAGCAGTCTTTGAGG +
Preference number: 1 (lower is better)
Translates to: NADGVKLFPVPKGEL*LKRFSGTQKQQSLR
Trigger: CCTCAAAGACTGCTGCTTCTGAGTCCCCGAGAACCTCTTCAACCACAGCTCTCCCTTAGGGACTGGGAACAATTTGACACCGTCAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561899.6
3UTR-3UTR CCA 90 bp GTCCCTAAGGGAGAGCTGTGGTTGAAGAGGTTCTCGGGGACTCAGAAGCAGCAGCTGCTCCCGCAGGACTaGAGCAAAGAACCTCACCTG +
Preference number: 2 (lower is better)
Translates to: VPKGELWLKRFSGTQKQQLLPQD*SKEPHL
Trigger: CAGGTGAGGTTCTTTGCTCCAGTCCTGCGGGAGCAG...CTGCTGCTTCTGAGTCCCCGAGAACCTCTTCAACCACAGCTCTCCCTTAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561899.6
3UTR CAA 90 bp GCTGACGGTGTCAAATTGTTCCCAGTCCCTAAGGGAGAGCTGTGGTaGAAGAGGTTCTCGGGGACTCAGAAGCAGCAGTCTTTGAGGAAA +
Preference number: 2 (lower is better)
Translates to: ADGVKLFPVPKGELW*KRFSGTQKQQSLRK
Trigger: TTTCCTCAAAGACTGCTGCTTCTGAGTCCCCGAGAACCTCTTCAACCACAGCTCTCCCTTAGGGACTGGGAACAATTTGACACCGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561899.6
3UTR-3UTR TCA 90 bp CAGAAGCAGCAGTCTTTGAGGAAAAGTCCAAGGATCTGCTCTACCCCGGTTACAGCAAAGAACCTCACCTaGGAAACAAGTCGGGAACTA +
Preference number: 2 (lower is better)
Translates to: QKQQSLRKSPRICSTPVTAKNLT*ETSREL
Trigger: TAGTTCCCGACTTGTTTCTCAGGTGAGGTTCTTTGC...TGTAACCGGGGTAGAGCAGATCCTTGGACTTTTCCTCAAAGACTGCTGCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561899.6
3UTR-3UTR GCA 90 bp TTGAATGCTGACGGTGTCAAATTGTTCCCAGTCCCTAAGGGAGAGCTGTGGTTGAAAAGTCCAAGGATCTaGTCTACCCCGGTTACAACC +
Preference number: 2 (lower is better)
Translates to: LNADGVKLFPVPKGELWLKSPRI*STPVTT
Trigger: GGTTGTAACCGGGGTAGAGCAGATCCTTGGACTTTT...CAACCACAGCTCTCCCTTAGGGACTGGGAACAATTTGACACCGTCAGCATTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561899.6
3UTR-3UTR GCA 90 bp TCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCATTGTTACCCAAATGTTAAAATCACAATGTTaGTTGAAAGAAGTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: SNSEPRPKKLIHTIVTQMLKSQC*LKEVSH
Trigger: GTGGCTGACTTCTTTCAAGCAACATTGTGATTTTAA...CATTTGGGTAACAATGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570255.6
3UTR CAA 90 bp AAAGTTAAAGTAATTAGAAAAATATTGAATGCTGACGGTGTCAAATaGTTCCCAGTCCCTAAGGGAGAGCTGTGGTTGAAGAGGTTCTCG +
Preference number: 2 (lower is better)
Translates to: KVKVIRKILNADGVK*FPVPKGELWLKRFS
Trigger: CGAGAACCTCTTCAACCACAGCTCTCCCTTAGGGACTGGGAACAATTTGACACCGTCAGCATTCAATATTTTTCTAATTACTTTAACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561899.6
3UTR CAA 90 bp GGCAATGTGCTGGGCACTTCACGGTCATTCTCATTTAATCCTTATTaGATGGAATTAAGAGATAGGGTCATGTTTTCTGTTTTACAGATG +
Preference number: 2 (lower is better)
Translates to: GNVLGTSRSFSFNPY*MELRDRVMFSVLQM
Trigger: CATCTGTAAAACAGAAAACATGACCCTATCTCTTAATTCCATCAAATAAGGATTAAATGAGAATGACCGTGAAGTGCCCAGCACATTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569445.2
3UTR CAA 90 bp CAAATGCTTGGATGTGAACTAGTTATGAGTCTTAAAATCACAATGTaGCTTGAAAGAAGTCAGCCACAAAAGAATGTGTATGATTCTGTC +
Preference number: 2 (lower is better)
Translates to: QMLGCELVMSLKITM*LERSQPQKNVYDSV
Trigger: GACAGAATCATACACATTCTTTTGTGGCTGACTTCTTTCAAGCAACATTGTGATTTTAAGACTCATAACTAGTTCACATCCAAGCATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570255.6
3UTR CCA 72 bp GGTGTCAAATTGTTCCCAGTCCCTAAGGGAGAGCTGTaGTTGAAGAGGTTCTCGGGGACTCAGAAGCAGCAG +
Preference number: 3 (lower is better)
Translates to: GVKLFPVPKGEL*LKRFSGTQKQQ
Trigger: CTGCTGCTTCTGAGTCCCCGAGAACCTCTTCAACCACAGCTCTCCCTTAGGGACTGGGAACAATTTGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561899.6
3UTR TCA 72 bp TCAAATTGTTCCCAGTCCCTAAGGGAGAGCTGTGGTTaGAGAGGTTCTCGGGGACTCAGAAGCAGCAGTCTT +
Preference number: 3 (lower is better)
Translates to: SNCSQSLRESCG*RGSRGLRSSSL
Trigger: AAGACTGCTGCTTCTGAGTCCCCGAGAACCTCTTCAACCACAGCTCTCCCTTAGGGACTGGGAACAATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561899.6
3UTR GCA 72 bp GCTGTCACTTATCAAATCTCTATGTCCCAGGCAATGTaGTGGGCACTTCACGGTCATTCTCATTTAATCCTT +
Preference number: 3 (lower is better)
Translates to: AVTYQISMSQAM*WALHGHSHLIL
Trigger: AAGGATTAAATGAGAATGACCGTGAAGTGCCCAGCACATTGCCTGGGACATAGAGATTTGATAAGTGACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569445.2
3UTR CCA 72 bp GTCACTTATCAAATCTCTATGTCCCAGGCAATGTGCTaGGCACTTCACGGTCATTCTCATTTAATCCTTATT +
Preference number: 3 (lower is better)
Translates to: VTYQISMSQAMC*ALHGHSHLILI
Trigger: AATAAGGATTAAATGAGAATGACCGTGAAGTGCCCAGCACATTGCCTGGGACATAGAGATTTGATAAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569445.2
3UTR-3UTR CAA 90 bp AAGTTGATTCACACCATTGTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTAAATCACAATGTTGCTaGAAAGAAGTCAGCCACAAA +
Preference number: 3 (lower is better)
Translates to: KLIHTIVTQMLGCELVMSKSQCC*KEVSHK
Trigger: TTTGTGGCTGACTTCTTTCAAGCAACATTGTGATTT...ACTCATAACTAGTTCACATCCAAGCATTTGGGTAACAATGGTGTGAATCAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR TCA 90 bp CCTGCTCCCGCAGGACTGGAGCAAAGAACCTCACCTGAGAAACAAGTCGGGAACGGGAGCAGAGGGGGCTaGGCCTCCGGGGAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PAPAGLEQRTSPEKQVGNGSRGG*ASGESL
Trigger: CAGGCTCTCCCCGGAGGCTCAGCCCCCTCTGCTCCC...GTTCCCGACTTGTTTCTCAGGTGAGGTTCTTTGCTCCAGTCCTGCGGGAGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR TCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCGGGAGCAGAGGGGGCTaGGCCTCCGGGGAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPGSRGG*ASGESL
Trigger: CAGGCTCTCCCCGGAGGCTCAGCCCCCTCTGCTCCC...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp CCTGCTCCCGCAGGACTGGAGCAAAGAACCTCACCTGAGAAACAAGTCGGGAACCCTGGCAGTTGCCCATaGGGAGCAGAGGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PAPAGLEQRTSPEKQVGNPGSCP*GAEGAE
Trigger: CTCAGCCCCCTCTGCTCCCCATGGGCAACTGCCAGG...GTTCCCGACTTGTTTCTCAGGTGAGGTTCTTTGCTCCAGTCCTGCGGGAGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR TCA 90 bp GTCCCTAAGGGAGAGCTGTGGTTGAAGAGGTTCTCGGGGACTCAGAAGCAGCAGAGCAAGCCCACGACGTaGGACCCTCGCCACTTCCCT +
Preference number: 4 (lower is better)
Translates to: VPKGELWLKRFSGTQKQQSKPTT*DPRHFP
Trigger: AGGGAAGTGGCGAGGGTCTCACGTCGTGGGCTTGCT...CTGCTGCTTCTGAGTCCCCGAGAACCTCTTCAACCACAGCTCTCCCTTAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR GCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCGGGGGATGTCAGGGCTaGGCAGGCCAGTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPGGCQG*AGQSCG
Trigger: CCCACAGGACTGGCCTGCGCAGCCCTGACATCCCCC...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp CCTGCTCCCGCAGGACTGGAGCAAAGAACCTCACCTGAGAAACAAGTCGGGAACACCAGAGGTGGGTGGTaGGCCAGACACAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PAPAGLEQRTSPEKQVGNTRGGW*ARHRCR
Trigger: CCTGCACCTGTGTCTGGCCCACCACCCACCTCTGGT...GTTCCCGACTTGTTTCTCAGGTGAGGTTCTTTGCTCCAGTCCTGCGGGAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR CCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCCGGGTTCTAGACCAGTaGGACTCCCGGCGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPRVLDQ*DSRRGW
Trigger: CCACCCGCGCCGGGAGTCCCACTGGTCTAGAACCCG...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR GCA 90 bp GGAGAGCTGTGGTTGAAGAGGTTCTCGGGGACTCAGAAGCAGCAGTCTTTGAGGTGGGCCAGACACAGGTaGAGGTTGTGCCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GELWLKRFSGTQKQQSLRWARHR*RLCPAW
Trigger: CCAGGCAGGGCACAACCTGCACCTGTGTCTGGCCCA...CCTCAAAGACTGCTGCTTCTGAGTCCCCGAGAACCTCTTCAACCACAGCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR GCA 90 bp GATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCTCAGAGCCGGGTCGGGAACTAGGCCAGTaGCCTCAGAGCCGGGTTCTA +
Preference number: 4 (lower is better)
Translates to: DSHLRNKSGTRPVPSEPGRELGQ*PQSRVL
Trigger: TAGAACCCGGCTCTGAGGGCACTGGCCTAGTTCCCG...ACCCGGCTCTGAGGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569481.1
CDS-3UTR CCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCCCTGGCAGTTGCCCATaGGGAGCAGAGGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPPGSCP*GAEGAE
Trigger: CTCAGCCCCCTCTGCTCCCCATGGGCAACTGCCAGG...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp GTCCCTAAGGGAGAGCTGTGGTTGAAGAGGTTCTCGGGGACTCAGAAGCAGCAGAAAGAGACCCAGTCCTaGGGGATGTCAGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: VPKGELWLKRFSGTQKQQKETQS*GMSGLR
Trigger: GCGCAGCCCTGACATCCCCCAGGACTGGGTCTCTTT...CTGCTGCTTCTGAGTCCCCGAGAACCTCTTCAACCACAGCTCTCCCTTAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR TCA 90 bp AACCTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACGGGAGCAGAGGGGGCTaGGCCTCCGGGGAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: NLFQLRAKAQEVDSHLRNGSRGG*ASGESL
Trigger: CAGGCTCTCCCCGGAGGCTCAGCCCCCTCTGCTCCC...GTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR TCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGGGGAGCAGAGGGGGCTaGGCCTCCGGGGAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKGSRGG*ASGESL
Trigger: CAGGCTCTCCCCGGAGGCTCAGCCCCCTCTGCTCCC...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR TCA 90 bp GGAGAGCTGTGGTTGAAGAGGTTCTCGGGGACTCAGAAGCAGCAGTCTTTGAGGCTCGCCACTTCCCTGTaGCTGTCCCATTCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: GELWLKRFSGTQKQQSLRLATSL*LSHSWD
Trigger: GTCCCAGGAATGGGACAGTCACAGGGAAGTGGCGAG...CCTCAAAGACTGCTGCTTCTGAGTCCCCGAGAACCTCTTCAACCACAGCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR TCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCAGCAAGCCCACGACGTaGGACCCTCGCCACTTCCCT +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPSKPTT*DPRHFP
Trigger: AGGGAAGTGGCGAGGGTCTCACGTCGTGGGCTTGCT...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR TCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCTCCAGCCCCCTCCTCTaGGCAGGATATGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPSSPLL*AGYGWL
Trigger: CAGCCACCCATATCCTGCTCAGAGGAGGGGGCTGGA...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR GCA 90 bp CAGAAGCAGCAGTCTTTGAGGAAAAGTCCAAGGATCTGCTCTACCCCGGTTACAGCCCTGCCTGGCAGTTaGCCATGGGGAGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: QKQQSLRKSPRICSTPVTALPGS*PWGAEG
Trigger: CCCCTCTGCTCCCCATGGGCAACTGCCAGGCAGGGC...TGTAACCGGGGTAGAGCAGATCCTTGGACTTTTCCTCAAAGACTGCTGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR GCA 90 bp TTGAATGCTGACGGTGTCAAATTGTTCCCAGTCCCTAAGGGAGAGCTGTGGTTGGGGGGATGTCAGGGCTaGGCAGGCCAGTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LNADGVKLFPVPKGELWLGGCQG*AGQSCG
Trigger: CCCACAGGACTGGCCTGCGCAGCCCTGACATCCCCC...CAACCACAGCTCTCCCTTAGGGACTGGGAACAATTTGACACCGTCAGCATTCAA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR CCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCACCAGAGGTGGGTGGTaGGCCAGACACAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPTRGGW*ARHRCR
Trigger: CCTGCACCTGTGTCTGGCCCACCACCCACCTCTGGT...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCCGCAGGCCAGTCCTGTaGGTGAGGAGGAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPRRPVL*VRRKLP
Trigger: TGGCAGCTTCCTCCTCACCCACAGGACTGGCCTGCG...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp GATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCTCAGAGCCGGGTCCCAGGACTGTGGCCTaGAATGTCCGGGTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: DSHLRNKSGTRPVPSEPGPRTVA*NVRVLF
Trigger: GAACAAGACCCGGACATTCCAGGCCACAGTCCTGGG...ACCCGGCTCTGAGGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569481.1
CDS-3UTR CCA 90 bp CCTGCTCCCGCAGGACTGGAGCAAAGAACCTCACCTGAGAAACAAGTCGGGAACCCTCTGAGCAGGATATaGGTGGCTGGCTGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: PAPAGLEQRTSPEKQVGNPLSRI*VAGWRV
Trigger: TACCCTCCAGCCAGCCACCCATATCCTGCTCAGAGG...GTTCCCGACTTGTTTCTCAGGTGAGGTTCTTTGCTCCAGTCCTGCGGGAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR CCA 90 bp CAGAAGCAGCAGTCTTTGAGGAAAAGTCCAAGGATCTGCTCTACCCCGGTTACACGGGTTCTAGACCAGTaGGACTCCCGGCGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: QKQQSLRKSPRICSTPVTRVLDQ*DSRRGW
Trigger: CCACCCGCGCCGGGAGTCCCACTGGTCTAGAACCCG...TGTAACCGGGGTAGAGCAGATCCTTGGACTTTTCCTCAAAGACTGCTGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR TCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCCTCGCCACTTCCCTGTaGCTGTCCCATTCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPLATSL*LSHSWD
Trigger: GTCCCAGGAATGGGACAGTCACAGGGAAGTGGCGAG...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR TCA 90 bp GAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCTCAGAGAGCAAGCCCACGACGTaGGACCCTCGCCACTTCCCT +
Preference number: 4 (lower is better)
Translates to: EVDSHLRNKSGTRPVPSESKPTT*DPRHFP
Trigger: AGGGAAGTGGCGAGGGTCTCACGTCGTGGGCTTGCT...CTCTGAGGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569481.1
CDS-3UTR TCA 90 bp GATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCTCAGAGCCGGGTCCTTTCAATCCCATCTaGCTTCCCAGGACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: DSHLRNKSGTRPVPSEPGPFNPI*LPRTVA
Trigger: GGCCACAGTCCTGGGAAGTCAGATGGGATTGAAAGG...ACCCGGCTCTGAGGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569481.1
CDS-3UTR TCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCCCAGCTCCTCCGAGGTaGGCAGCTTGGTCAGCACAA +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPPAPPR*AAWSAQ
Trigger: TTGTGCTGACCAAGCTGCTCACCTCGGAGGAGCTGG...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR GCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCCGGGAACTAGGCCAGTaGCCTCAGAGCCGGGTTCTA +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPRELGQ*PQSRVL
Trigger: TAGAACCCGGCTCTGAGGGCACTGGCCTAGTTCCCG...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR CCA 90 bp GACGGTGTCAAATTGTTCCCAGTCCCTAAGGGAGAGCTGTGGTTGAAGAGGTTCCGCAGGCCAGTCCTGTaGGTGAGGAGGAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: DGVKLFPVPKGELWLKRFRRPVL*VRRKLP
Trigger: TGGCAGCTTCCTCCTCACCCACAGGACTGGCCTGCG...GAACCTCTTCAACCACAGCTCTCCCTTAGGGACTGGGAACAATTTGACACCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR CCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCAAAGAGACCCAGTCCTaGGGGATGTCAGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPKETQS*GMSGLR
Trigger: GCGCAGCCCTGACATCCCCCAGGACTGGGTCTCTTT...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp GTCCCTAAGGGAGAGCTGTGGTTGAAGAGGTTCTCGGGGACTCAGAAGCAGCAGCTCCGAAGTTCAAGGTaGTCAGCAAGCCCACGACGT +
Preference number: 4 (lower is better)
Translates to: VPKGELWLKRFSGTQKQQLRSSR*SASPRR
Trigger: ACGTCGTGGGCTTGCTGACCACCTTGAACTTCGGAG...CTGCTGCTTCTGAGTCCCCGAGAACCTCTTCAACCACAGCTCTCCCTTAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR CCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCGACTCCCGGCGCGGGTaGAAGCACATAGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPDSRRG*KHIAVT
Trigger: TGTCACTGCTATGTGCTTCCACCCGCGCCGGGAGTC...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR TCA 90 bp CAGAAGCAGCAGTCTTTGAGGAAAAGTCCAAGGATCTGCTCTACCCCGGTTACATCCAGCCCCCTCCTCTaGGCAGGATATGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QKQQSLRKSPRICSTPVTSSPLL*AGYGWL
Trigger: CAGCCACCCATATCCTGCTCAGAGGAGGGGGCTGGA...TGTAACCGGGGTAGAGCAGATCCTTGGACTTTTCCTCAAAGACTGCTGCTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR GCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGGCCCTGCCTGGCAGTTaGCCATGGGGAGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKALPGS*PWGAEG
Trigger: CCCCTCTGCTCCCCATGGGCAACTGCCAGGCAGGGC...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR GCA 90 bp AACCTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACGCCCTGCCTGGCAGTTaGCCATGGGGAGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: NLFQLRAKAQEVDSHLRNALPGS*PWGAEG
Trigger: CCCCTCTGCTCCCCATGGGCAACTGCCAGGCAGGGC...GTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR GCA 90 bp AAGAGGTTCTCGGGGACTCAGAAGCAGCAGTCTTTGAGGAAAAGTCCAAGGATCCACAGGTGCAGGTTGTaGCCTGCCTGGCAGTTGCCC +
Preference number: 4 (lower is better)
Translates to: KRFSGTQKQQSLRKSPRIHRCRL*PAWQLP
Trigger: GGGCAACTGCCAGGCAGGGCACAACCTGCACCTGTG...GATCCTTGGACTTTTCCTCAAAGACTGCTGCTTCTGAGTCCCCGAGAACCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR GCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGGGGGGATGTCAGGGCTaGGCAGGCCAGTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKGGCQG*AGQSCG
Trigger: CCCACAGGACTGGCCTGCGCAGCCCTGACATCCCCC...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCCCCAGGACTGTGGCCTaGAATGTCCGGGTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPPRTVA*NVRVLF
Trigger: GAACAAGACCCGGACATTCCAGGCCACAGTCCTGGG...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR CCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCGACTTCCCAGGACTGTaGCCTGGAATGTCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPDFPGL*PGMSGS
Trigger: AGACCCGGACATTCCAGGCCACAGTCCTGGGAAGTC...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR CCA 90 bp GGAGAGCTGTGGTTGAAGAGGTTCTCGGGGACTCAGAAGCAGCAGTCTTTGAGGCAGGATATGGGTGGCTaGCTGGAGGGTAGGATTCCT +
Preference number: 4 (lower is better)
Translates to: GELWLKRFSGTQKQQSLRQDMGG*LEGRIP
Trigger: AGGAATCCTACCCTCCAGCCAGCCACCCATATCCTG...CCTCAAAGACTGCTGCTTCTGAGTCCCCGAGAACCTCTTCAACCACAGCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR CCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCCCTCTGAGCAGGATATaGGTGGCTGGCTGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPPLSRI*VAGWRV
Trigger: TACCCTCCAGCCAGCCACCCATATCCTGCTCAGAGG...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGCGGGTTCTAGACCAGTaGGACTCCCGGCGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKRVLDQ*DSRRGW
Trigger: CCACCCGCGCCGGGAGTCCCACTGGTCTAGAACCCG...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR TCA 90 bp CAGAAGCAGCAGTCTTTGAGGAAAAGTCCAAGGATCTGCTCTACCCCGGTTACACCAGCTCCTCCGAGGTaGGCAGCTTGGTCAGCACAA +
Preference number: 4 (lower is better)
Translates to: QKQQSLRKSPRICSTPVTPAPPR*AAWSAQ
Trigger: TTGTGCTGACCAAGCTGCTCACCTCGGAGGAGCTGG...TGTAACCGGGGTAGAGCAGATCCTTGGACTTTTCCTCAAAGACTGCTGCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR TCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCGGGCGAGGATTTGGCTaGGGAATAGTTCCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPGRGFG*GIVPAR
Trigger: TCTGGCTGGAACTATTCCTCAGCCAAATCCTCGCCC...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566848.5
CDS-3UTR GCA 90 bp TTGAATGCTGACGGTGTCAAATTGTTCCCAGTCCCTAAGGGAGAGCTGTGGTTGCGGGAACTAGGCCAGTaGCCTCAGAGCCGGGTTCTA +
Preference number: 4 (lower is better)
Translates to: LNADGVKLFPVPKGELWLRELGQ*PQSRVL
Trigger: TAGAACCCGGCTCTGAGGGCACTGGCCTAGTTCCCG...CAACCACAGCTCTCCCTTAGGGACTGGGAACAATTTGACACCGTCAGCATTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR CCA 90 bp AACCTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACCCTGGCAGTTGCCCATaGGGAGCAGAGGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: NLFQLRAKAQEVDSHLRNPGSCP*GAEGAE
Trigger: CTCAGCCCCCTCTGCTCCCCATGGGCAACTGCCAGG...GTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCGCAGCAGGATCAAAGTaGCACAGACCAGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPAAGSK*HRPEVG
Trigger: ACCCACCTCTGGTCTGTGCCACTTTGATCCTGCTGC...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCCTCCGAAGTTCAAGGTaGTCAGCAAGCCCACGACGT +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPLRSSR*SASPRR
Trigger: ACGTCGTGGGCTTGCTGACCACCTTGAACTTCGGAG...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR CCA 90 bp GAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCTCAGAGGACTTCCCAGGACTGTaGCCTGGAATGTCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: EVDSHLRNKSGTRPVPSEDFPGL*PGMSGS
Trigger: AGACCCGGACATTCCAGGCCACAGTCCTGGGAAGTC...CTCTGAGGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569481.1
CDS-3UTR CCA 90 bp ACTCAGAAGCAGCAGTCTTTGAGGAAAAGTCCAAGGATCTGCTCTACCCCGGTTGACTCCCGGCGCGGGTaGAAGCACATAGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: TQKQQSLRKSPRICSTPVDSRRG*KHIAVT
Trigger: TGTCACTGCTATGTGCTTCCACCCGCGCCGGGAGTC...AACCGGGGTAGAGCAGATCCTTGGACTTTTCCTCAAAGACTGCTGCTTCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR TCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGAGCAAGCCCACGACGTaGGACCCTCGCCACTTCCCT +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKSKPTT*DPRHFP
Trigger: AGGGAAGTGGCGAGGGTCTCACGTCGTGGGCTTGCT...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR TCA 90 bp ATCTCTATGTCCCAGGCAATGTGCTGGGCACTTCACGGTCATTCTCATTTAATCAGCAAGCCCACGACGTaGGACCCTCGCCACTTCCCT +
Preference number: 4 (lower is better)
Translates to: ISMSQAMCWALHGHSHLISKPTT*DPRHFP
Trigger: AGGGAAGTGGCGAGGGTCTCACGTCGTGGGCTTGCT...GATTAAATGAGAATGACCGTGAAGTGCCCAGCACATTGCCTGGGACATAGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS-3UTR TCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCCAGCCCCCTCCTCTaGGCAGGATATGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKSSPLL*AGYGWL
Trigger: CAGCCACCCATATCCTGCTCAGAGGAGGGGGCTGGA...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR TCA 90 bp ATAGCTGTCACTTATCAAATCTCTATGTCCCAGGCAATGTGCTGGGCACTTCACTCCAGCCCCCTCCTCTaGGCAGGATATGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: IAVTYQISMSQAMCWALHSSPLL*AGYGWL
Trigger: CAGCCACCCATATCCTGCTCAGAGGAGGGGGCTGGA...GTGAAGTGCCCAGCACATTGCCTGGGACATAGAGATTTGATAAGTGACAGCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS-3UTR TCA 90 bp AACCTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACCCTCCGGGGAGAGCCTaGGATACCTCCACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: NLFQLRAKAQEVDSHLRNPPGRA*DTSTSS
Trigger: GGAGGAAGTGGAGGTATCTCAGGCTCTCCCCGGAGG...GTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414689.6
CDS-3UTR TCA 90 bp CAGAAGCAGCAGTCTTTGAGGAAAAGTCCAAGGATCTGCTCTACCCCGGTTACAAGGGAGAGCTGTGGTTaGAGAGGTTCTCGGGGACTC +
Preference number: 4 (lower is better)
Translates to: QKQQSLRKSPRICSTPVTRESCG*RGSRGL
Trigger: GAGTCCCCGAGAACCTCTTCAACCACAGCTCTCCCT...TGTAACCGGGGTAGAGCAGATCCTTGGACTTTTCCTCAAAGACTGCTGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR TCA 90 bp ATCTCTATGTCCCAGGCAATGTGCTGGGCACTTCACGGTCATTCTCATTTAATCCCCTGGCGACCCATCTaGGGCTCTTACCGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: ISMSQAMCWALHGHSHLIPWRPI*GSYRGE
Trigger: CTCACCTCGGTAAGAGCCTCAGATGGGTCGCCAGGG...GATTAAATGAGAATGACCGTGAAGTGCCCAGCACATTGCCTGGGACATAGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS-3UTR GCA 90 bp AACCTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACGTGCAGGTTGTGCCCTaGCTGGCAGTTGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: NLFQLRAKAQEVDSHLRNVQVVP*LAVAHG
Trigger: CCCATGGGCAACTGCCAGGCAGGGCACAACCTGCAC...GTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR GCA 90 bp AACCTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACCACAGGTGCAGGTTGTaGCCTGCCTGGCAGTTGCCC +
Preference number: 4 (lower is better)
Translates to: NLFQLRAKAQEVDSHLRNHRCRL*PAWQLP
Trigger: GGGCAACTGCCAGGCAGGGCACAACCTGCACCTGTG...GTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR GCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGCACAGGTGCAGGTTGTaGCCTGCCTGGCAGTTGCCC +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKHRCRL*PAWQLP
Trigger: GGGCAACTGCCAGGCAGGGCACAACCTGCACCTGTG...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR GCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGTGGGCCAGACACAGGTaGAGGTTGTGCCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKWARHR*RLCPAW
Trigger: CCAGGCAGGGCACAACCTGCACCTGTGTCTGGCCCA...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR GCA 90 bp AACCTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACTGGGCCAGACACAGGTaGAGGTTGTGCCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: NLFQLRAKAQEVDSHLRNWARHR*RLCPAW
Trigger: CCAGGCAGGGCACAACCTGCACCTGTGTCTGGCCCA...GTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGAGGTTGTGCCCTGCCTaGCAGTTGCCCATGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKRLCPA*QLPMGS
Trigger: GCTCCCCATGGGCAACTGCCAGGCAGGGCACAACCT...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp AACCTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACACCAGAGGTGGGTGGTaGGCCAGACACAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: NLFQLRAKAQEVDSHLRNTRGGW*ARHRCR
Trigger: CCTGCACCTGTGTCTGGCCCACCACCCACCTCTGGT...GTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGCGCAGGCCAGTCCTGTaGGTGAGGAGGAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKRRPVL*VRRKLP
Trigger: TGGCAGCTTCCTCCTCACCCACAGGACTGGCCTGCG...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp GGAGAGCTGTGGTTGAAGAGGTTCTCGGGGACTCAGAAGCAGCAGTCTTTGAGGGGTCTTGTTCCTGTCTaGACCGTCTCCGAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: GELWLKRFSGTQKQQSLRGLVPV*TVSEVQ
Trigger: TTGAACTTCGGAGACGGTCCAGACAGGAACAAGACC...CCTCAAAGACTGCTGCTTCTGAGTCCCCGAGAACCTCTTCAACCACAGCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR CCA 90 bp CAGAAGCAGCAGTCTTTGAGGAAAAGTCCAAGGATCTGCTCTACCCCGGTTACACCCAGGACTGTGGCCTaGAATGTCCGGGTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QKQQSLRKSPRICSTPVTPRTVA*NVRVLF
Trigger: GAACAAGACCCGGACATTCCAGGCCACAGTCCTGGG...TGTAACCGGGGTAGAGCAGATCCTTGGACTTTTCCTCAAAGACTGCTGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR CCA 90 bp TTGAATGCTGACGGTGTCAAATTGTTCCCAGTCCCTAAGGGAGAGCTGTGGTTGGACTTCCCAGGACTGTaGCCTGGAATGTCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: LNADGVKLFPVPKGELWLDFPGL*PGMSGS
Trigger: AGACCCGGACATTCCAGGCCACAGTCCTGGGAAGTC...CAACCACAGCTCTCCCTTAGGGACTGGGAACAATTTGACACCGTCAGCATTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR CCA 90 bp TTGAATGCTGACGGTGTCAAATTGTTCCCAGTCCCTAAGGGAGAGCTGTGGTTGCTGCTCCCGCAGGACTaGAGCAAAGAACCTCACCTG +
Preference number: 4 (lower is better)
Translates to: LNADGVKLFPVPKGELWLLLPQD*SKEPHL
Trigger: CAGGTGAGGTTCTTTGCTCCAGTCCTGCGGGAGCAG...CAACCACAGCTCTCCCTTAGGGACTGGGAACAATTTGACACCGTCAGCATTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR CCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCTCTGGGGCGAGGATTTaGCTGAGGAATAGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPSGARI*LRNSSS
Trigger: GCTGGAACTATTCCTCAGCCAAATCCTCGCCCCAGA...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566848.5
CDS-3UTR TCA 90 bp CACACCATTGTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTAAAATCGGGAGCAGAGGGGGCTaGGCCTCCGGGGAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: HTIVTQMLGCELVMSLKIGSRGG*ASGESL
Trigger: CAGGCTCTCCCCGGAGGCTCAGCCCCCTCTGCTCCC...GATTTTAAGACTCATAACTAGTTCACATCCAAGCATTTGGGTAACAATGGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR TCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGCTCGCCACTTCCCTGTaGCTGTCCCATTCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKLATSL*LSHSWD
Trigger: GTCCCAGGAATGGGACAGTCACAGGGAAGTGGCGAG...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR TCA 90 bp TTGAATGCTGACGGTGTCAAATTGTTCCCAGTCCCTAAGGGAGAGCTGTGGTTGCCTTTCAATCCCATCTaGCTTCCCAGGACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LNADGVKLFPVPKGELWLPFNPI*LPRTVA
Trigger: GGCCACAGTCCTGGGAAGTCAGATGGGATTGAAAGG...CAACCACAGCTCTCCCTTAGGGACTGGGAACAATTTGACACCGTCAGCATTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR TCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGCCAGCTCCTCCGAGGTaGGCAGCTTGGTCAGCACAA +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKPAPPR*AAWSAQ
Trigger: TTGTGCTGACCAAGCTGCTCACCTCGGAGGAGCTGG...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR GCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGCGGGAACTAGGCCAGTaGCCTCAGAGCCGGGTTCTA +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKRELGQ*PQSRVL
Trigger: TAGAACCCGGCTCTGAGGGCACTGGCCTAGTTCCCG...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR CCA 90 bp ACTCAGAAGCAGCAGTCTTTGAGGAAAAGTCCAAGGATCTGCTCTACCCCGGTTGCAGCAGGATCAAAGTaGCACAGACCAGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: TQKQQSLRKSPRICSTPVAAGSK*HRPEVG
Trigger: ACCCACCTCTGGTCTGTGCCACTTTGATCCTGCTGC...AACCGGGGTAGAGCAGATCCTTGGACTTTTCCTCAAAGACTGCTGCTTCTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR CCA 90 bp AACCTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAAGAGACCCAGTCCTaGGGGATGTCAGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: NLFQLRAKAQEVDSHLRNKETQS*GMSGLR
Trigger: GCGCAGCCCTGACATCCCCCAGGACTGGGTCTCTTT...GTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGAAAGAGACCCAGTCCTaGGGGATGTCAGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKKETQS*GMSGLR
Trigger: GCGCAGCCCTGACATCCCCCAGGACTGGGTCTCTTT...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCGGTCTTGTTCCTGTCTaGACCGTCTCCGAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPGLVPV*TVSEVQ
Trigger: TTGAACTTCGGAGACGGTCCAGACAGGAACAAGACC...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR CCA 90 bp GGAGAGCTGTGGTTGAAGAGGTTCTCGGGGACTCAGAAGCAGCAGTCTTTGAGGAGCACAAGGCCTTCATaGCTCCAGACACTAACACAT +
Preference number: 4 (lower is better)
Translates to: GELWLKRFSGTQKQQSLRSTRPS*LQTLTH
Trigger: ATGTGTTAGTGTCTGGAGCCATGAAGGCCTTGTGCT...CCTCAAAGACTGCTGCTTCTGAGTCCCCGAGAACCTCTTCAACCACAGCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR CCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGGACTCCCGGCGCGGGTaGAAGCACATAGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKDSRRG*KHIAVT
Trigger: TGTCACTGCTATGTGCTTCCACCCGCGCCGGGAGTC...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR CCA 90 bp AAGAGGTTCTCGGGGACTCAGAAGCAGCAGTCTTTGAGGAAAAGTCCAAGGATCCCTAAGGGAGAGCTGTaGTTGAAGAGGTTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: KRFSGTQKQQSLRKSPRIPKGEL*LKRFSG
Trigger: CCCCGAGAACCTCTTCAACCACAGCTCTCCCTTAGG...GATCCTTGGACTTTTCCTCAAAGACTGCTGCTTCTGAGTCCCCGAGAACCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR TCA 90 bp GTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCTCAGAGCCGCAAGGCCCAAGAAGTTaGTTCACACCTGAGAAACAA +
Preference number: 4 (lower is better)
Translates to: VDSHLRNKSGTRPVPSEPQGPRS*FTPEKQ
Trigger: TTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTG...CGGCTCTGAGGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569481.1
CDS-3UTR GCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCGAGCAGTGTACTCCGTaGTGGAAGAAGGAAACTGAA +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPEQCTP*WKKETE
Trigger: TTCAGTTTCCTTCTTCCAGCACGGAGTACACTGCTC...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566848.5
CDS-3UTR CCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGCCCAGGACTGTGGCCTaGAATGTCCGGGTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKPRTVA*NVRVLF
Trigger: GAACAAGACCCGGACATTCCAGGCCACAGTCCTGGG...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR CCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGGACTTCCCAGGACTGTaGCCTGGAATGTCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKDFPGL*PGMSGS
Trigger: AGACCCGGACATTCCAGGCCACAGTCCTGGGAAGTC...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR CCA 90 bp TTTAGACACTTGTTCTACGTCACACAGCCCCCAAGGCAGGGTTATAAAACCTGTGACTTCCCAGGACTGTaGCCTGGAATGTCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: FRHLFYVTQPPRQGYKTCDFPGL*PGMSGS
Trigger: AGACCCGGACATTCCAGGCCACAGTCCTGGGAAGTC...ACAGGTTTTATAACCCTGCCTTGGGGGCTGTGTGACGTAGAACAAGTGTCTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS-3UTR CCA 90 bp CAGAAGCAGCAGTCTTTGAGGAAAAGTCCAAGGATCTGCTCTACCCCGGTTACAATATGGGTGGCTGGCTaGAGGGTAGGATTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: QKQQSLRKSPRICSTPVTIWVAG*RVGFLE
Trigger: TTCCAGGAATCCTACCCTCCAGCCAGCCACCCATAT...TGTAACCGGGGTAGAGCAGATCCTTGGACTTTTCCTCAAAGACTGCTGCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR CCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGCCTCTGAGCAGGATATaGGTGGCTGGCTGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKPLSRI*VAGWRV
Trigger: TACCCTCCAGCCAGCCACCCATATCCTGCTCAGAGG...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp TCTATGTCCCAGGCAATGTGCTGGGCACTTCACGGTCATTCTCATTTAATCCTTCCTCTGAGCAGGATATaGGTGGCTGGCTGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: SMSQAMCWALHGHSHLILPLSRI*VAGWRV
Trigger: TACCCTCCAGCCAGCCACCCATATCCTGCTCAGAGG...AAGGATTAAATGAGAATGACCGTGAAGTGCCCAGCACATTGCCTGGGACATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS-3UTR CCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCAGCACAAGGCCTTCATaGCTCCAGACACTAACACAT +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPSTRPS*LQTLTH
Trigger: ATGTGTTAGTGTCTGGAGCCATGAAGGCCTTGTGCT...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCCCCCAGATTCCTCTGTaGTCAAGCCAGTTTCATTCA +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPPQIPL*SSQFHS
Trigger: TGAATGAAACTGGCTTGACCACAGAGGAATCTGGGG...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000414689.6
CDS-3UTR TCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGCCTTTCAATCCCATCTaGCTTCCCAGGACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKPFNPI*LPRTVA
Trigger: GGCCACAGTCCTGGGAAGTCAGATGGGATTGAAAGG...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR TCA 90 bp AACCTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACCCTTTCAATCCCATCTaGCTTCCCAGGACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: NLFQLRAKAQEVDSHLRNPFNPI*LPRTVA
Trigger: GGCCACAGTCCTGGGAAGTCAGATGGGATTGAAAGG...GTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR TCA 90 bp GTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCTCAGAGCCGAAGTTGATTCACACCTaGGAAACAAGTCGGGAACTA +
Preference number: 4 (lower is better)
Translates to: VDSHLRNKSGTRPVPSEPKLIHT*ETSREL
Trigger: TAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTT...CGGCTCTGAGGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569481.1
CDS-3UTR TCA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCCAAGGCCCAAGAAGTTaGTTCACACCTGAGAAACAA +
Preference number: 4 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPQGPRS*FTPEKQ
Trigger: TTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTG...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR CCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGGCAGCAGGATCAAAGTaGCACAGACCAGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKAAGSK*HRPEVG
Trigger: ACCCACCTCTGGTCTGTGCCACTTTGATCCTGCTGC...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGCTCCGAAGTTCAAGGTaGTCAGCAAGCCCACGACGT +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKLRSSR*SASPRR
Trigger: ACGTCGTGGGCTTGCTGACCACCTTGAACTTCGGAG...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR CCA 90 bp TCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCATTGTTACCCAAATGCTCCGAAGTTCAAGGTaGTCAGCAAGCCCACGACGT +
Preference number: 4 (lower is better)
Translates to: SNSEPRPKKLIHTIVTQMLRSSR*SASPRR
Trigger: ACGTCGTGGGCTTGCTGACCACCTTGAACTTCGGAG...CATTTGGGTAACAATGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR CCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGCAGGATATGGGTGGCTaGCTGGAGGGTAGGATTCCT +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKQDMGG*LEGRIP
Trigger: AGGAATCCTACCCTCCAGCCAGCCACCCATATCCTG...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp AACCTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACCAGGATATGGGTGGCTaGCTGGAGGGTAGGATTCCT +
Preference number: 4 (lower is better)
Translates to: NLFQLRAKAQEVDSHLRNQDMGG*LEGRIP
Trigger: AGGAATCCTACCCTCCAGCCAGCCACCCATATCCTG...GTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp ATAGCTGTCACTTATCAAATCTCTATGTCCCAGGCAATGTGCTGGGCACTTCACCAGGATATGGGTGGCTaGCTGGAGGGTAGGATTCCT +
Preference number: 4 (lower is better)
Translates to: IAVTYQISMSQAMCWALHQDMGG*LEGRIP
Trigger: AGGAATCCTACCCTCCAGCCAGCCACCCATATCCTG...GTGAAGTGCCCAGCACATTGCCTGGGACATAGAGATTTGATAAGTGACAGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS-3UTR CCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGCAGGAAGCACTGTTCTaGGGCGAGGATTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKQEALF*GEDLAE
Trigger: CTCAGCCAAATCCTCGCCCCAGAACAGTGCTTCCTG...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566848.5
CDS-3UTR TCA 90 bp ACTCAGAAGCAGCAGTCTTTGAGGAAAAGTCCAAGGATCTGCTCTACCCCGGTTGCAAAGAACCTCACCTaGGAAACAAGTCGGGAACTA +
Preference number: 4 (lower is better)
Translates to: TQKQQSLRKSPRICSTPVAKNLT*ETSREL
Trigger: TAGTTCCCGACTTGTTTCTCAGGTGAGGTTCTTTGC...AACCGGGGTAGAGCAGATCCTTGGACTTTTCCTCAAAGACTGCTGCTTCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR TCA 90 bp AATCTCTATGTCCCAGGCAATGTGCTGGGCACTTCACGGTCATTCTCATTTAATAGGCTCTTACCGAGGTaGGCAGCTTGGTCAGCACAA +
Preference number: 4 (lower is better)
Translates to: NLYVPGNVLGTSRSFSFNRLLPR*AAWSAQ
Trigger: TTGTGCTGACCAAGCTGCTCACCTCGGTAAGAGCCT...ATTAAATGAGAATGACCGTGAAGTGCCCAGCACATTGCCTGGGACATAGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS-3UTR GCA 90 bp AAATCACAATGTTGCTTGAAAGAAGTCAGCCACAAAAGAATGTGTATGATTCTGGCCCTGCCTGGCAGTTaGCCATGGGGAGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: KSQCCLKEVSHKRMCMILALPGS*PWGAEG
Trigger: CCCCTCTGCTCCCCATGGGCAACTGCCAGGCAGGGC...CAGAATCATACACATTCTTTTGTGGCTGACTTCTTTCAAGCAACATTGTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR GCA 90 bp GTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTAAAATCACAATGTTGGGGGGATGTCAGGGCTaGGCAGGCCAGTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: VTQMLGCELVMSLKITMLGGCQG*AGQSCG
Trigger: CCCACAGGACTGGCCTGCGCAGCCCTGACATCCCCC...CAACATTGTGATTTTAAGACTCATAACTAGTTCACATCCAAGCATTTGGGTAAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR GCA 90 bp CAGAAGCAGCAGTCTTTGAGGAAAAGTCCAAGGATCTGCTCTACCCCGGTTACAAAAAGTCCAAGGATCTaGTCTACCCCGGTTACAACC +
Preference number: 4 (lower is better)
Translates to: QKQQSLRKSPRICSTPVTKSPRI*STPVTT
Trigger: GGTTGTAACCGGGGTAGAGCAGATCCTTGGACTTTT...TGTAACCGGGGTAGAGCAGATCCTTGGACTTTTCCTCAAAGACTGCTGCTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR CCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGATATGGGTGGCTGGCTaGAGGGTAGGATTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKIWVAG*RVGFLE
Trigger: TTCCAGGAATCCTACCCTCCAGCCAGCCACCCATAT...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp AACCTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACATATGGGTGGCTGGCTaGAGGGTAGGATTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: NLFQLRAKAQEVDSHLRNIWVAG*RVGFLE
Trigger: TTCCAGGAATCCTACCCTCCAGCCAGCCACCCATAT...GTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp ATCTCTATGTCCCAGGCAATGTGCTGGGCACTTCACGGTCATTCTCATTTAATCATATGGGTGGCTGGCTaGAGGGTAGGATTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: ISMSQAMCWALHGHSHLIIWVAG*RVGFLE
Trigger: TTCCAGGAATCCTACCCTCCAGCCAGCCACCCATAT...GATTAAATGAGAATGACCGTGAAGTGCCCAGCACATTGCCTGGGACATAGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS-3UTR CCA 90 bp CTAGTTATGAGTCTTAAAATCACAATGTTGCTTGAAAGAAGTCAGCCACAAAAGCGGGTTCTAGACCAGTaGGACTCCCGGCGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: LVMSLKITMLLERSQPQKRVLDQ*DSRRGW
Trigger: CCACCCGCGCCGGGAGTCCCACTGGTCTAGAACCCG...CTTTTGTGGCTGACTTCTTTCAAGCAACATTGTGATTTTAAGACTCATAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR CCA 90 bp GAGATGTTTAGACACTTGTTCTACGTCACACAGCCCCCAAGGCAGGGTTATAAATCCCAGGCAATGTGCTaGGCACTTCACGGTCATTCT +
Preference number: 4 (lower is better)
Translates to: EMFRHLFYVTQPPRQGYKSQAMC*ALHGHS
Trigger: AGAATGACCGTGAAGTGCCCAGCACATTGCCTGGGA...TTTATAACCCTGCCTTGGGGGCTGTGTGACGTAGAACAAGTGTCTAAACATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS-3UTR TCA 90 bp TTGATTCACACCATTGTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTTCCAGCCCCCTCCTCTaGGCAGGATATGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LIHTIVTQMLGCELVMSLSSPLL*AGYGWL
Trigger: CAGCCACCCATATCCTGCTCAGAGGAGGGGGCTGGA...AAGACTCATAACTAGTTCACATCCAAGCATTTGGGTAACAATGGTGTGAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR GCA 90 bp CAGAAGCAGCAGTCTTTGAGGAAAAGTCCAAGGATCTGCTCTACCCCGGTTACAAAGGACCAGTTGTCCTaGAGAAGATCCTTTCAATCC +
Preference number: 4 (lower is better)
Translates to: QKQQSLRKSPRICSTPVTKDQLS*RRSFQS
Trigger: GGATTGAAAGGATCTTCTGCAGGACAACTGGTCCTT...TGTAACCGGGGTAGAGCAGATCCTTGGACTTTTCCTCAAAGACTGCTGCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR CCA 90 bp ACCATTGTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTAAAATCACACCTGGCAGTTGCCCATaGGGAGCAGAGGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TIVTQMLGCELVMSLKITPGSCP*GAEGAE
Trigger: CTCAGCCCCCTCTGCTCCCCATGGGCAACTGCCAGG...TGTGATTTTAAGACTCATAACTAGTTCACATCCAAGCATTTGGGTAACAATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR CCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGGGTCTTGTTCCTGTCTaGACCGTCTCCGAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKGLVPV*TVSEVQ
Trigger: TTGAACTTCGGAGACGGTCCAGACAGGAACAAGACC...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR CCA 90 bp AACCTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACGGTCTTGTTCCTGTCTaGACCGTCTCCGAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: NLFQLRAKAQEVDSHLRNGLVPV*TVSEVQ
Trigger: TTGAACTTCGGAGACGGTCCAGACAGGAACAAGACC...GTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR TCA 90 bp ACCATTGTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTAAAATCACAAGCAAGCCCACGACGTaGGACCCTCGCCACTTCCCT +
Preference number: 4 (lower is better)
Translates to: TIVTQMLGCELVMSLKITSKPTT*DPRHFP
Trigger: AGGGAAGTGGCGAGGGTCTCACGTCGTGGGCTTGCT...TGTGATTTTAAGACTCATAACTAGTTCACATCCAAGCATTTGGGTAACAATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR TCA 90 bp TTGATTCACACCATTGTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTCCAGCTCCTCCGAGGTaGGCAGCTTGGTCAGCACAA +
Preference number: 4 (lower is better)
Translates to: LIHTIVTQMLGCELVMSLPAPPR*AAWSAQ
Trigger: TTGTGCTGACCAAGCTGCTCACCTCGGAGGAGCTGG...AAGACTCATAACTAGTTCACATCCAAGCATTTGGGTAACAATGGTGTGAATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR GCA 90 bp CTAGTTATGAGTCTTAAAATCACAATGTTGCTTGAAAGAAGTCAGCCACAAAAGCACAGGTGCAGGTTGTaGCCTGCCTGGCAGTTGCCC +
Preference number: 4 (lower is better)
Translates to: LVMSLKITMLLERSQPQKHRCRL*PAWQLP
Trigger: GGGCAACTGCCAGGCAGGGCACAACCTGCACCTGTG...CTTTTGTGGCTGACTTCTTTCAAGCAACATTGTGATTTTAAGACTCATAACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR GCA 90 bp AAATCACAATGTTGCTTGAAAGAAGTCAGCCACAAAAGAATGTGTATGATTCTGTGGGCCAGACACAGGTaGAGGTTGTGCCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: KSQCCLKEVSHKRMCMILWARHR*RLCPAW
Trigger: CCAGGCAGGGCACAACCTGCACCTGTGTCTGGCCCA...CAGAATCATACACATTCTTTTGTGGCTGACTTCTTTCAAGCAACATTGTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR CCA 90 bp ACCATTGTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTAAAATCACAACCAGAGGTGGGTGGTaGGCCAGACACAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: TIVTQMLGCELVMSLKITTRGGW*ARHRCR
Trigger: CCTGCACCTGTGTCTGGCCCACCACCCACCTCTGGT...TGTGATTTTAAGACTCATAACTAGTTCACATCCAAGCATTTGGGTAACAATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR CCA 90 bp AAATCACAATGTTGCTTGAAAGAAGTCAGCCACAAAAGAATGTGTATGATTCTGCGCAGGCCAGTCCTGTaGGTGAGGAGGAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: KSQCCLKEVSHKRMCMILRRPVL*VRRKLP
Trigger: TGGCAGCTTCCTCCTCACCCACAGGACTGGCCTGCG...CAGAATCATACACATTCTTTTGTGGCTGACTTCTTTCAAGCAACATTGTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR CCA 90 bp GTAAACAACAATAGCTGTCACTTATCAAATCTCTATGTCCCAGGCAATGTGCTGCTCCGAAGTTCAAGGTaGTCAGCAAGCCCACGACGT +
Preference number: 4 (lower is better)
Translates to: VNNNSCHLSNLYVPGNVLLRSSR*SASPRR
Trigger: ACGTCGTGGGCTTGCTGACCACCTTGAACTTCGGAG...CAGCACATTGCCTGGGACATAGAGATTTGATAAGTGACAGCTATTGTTGTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS-3UTR CCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGAGCACAAGGCCTTCATaGCTCCAGACACTAACACAT +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKSTRPS*LQTLTH
Trigger: ATGTGTTAGTGTCTGGAGCCATGAAGGCCTTGTGCT...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CCA 90 bp TTGATTCACACCATTGTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTGACTCCCGGCGCGGGTaGAAGCACATAGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: LIHTIVTQMLGCELVMSLDSRRG*KHIAVT
Trigger: TGTCACTGCTATGTGCTTCCACCCGCGCCGGGAGTC...AAGACTCATAACTAGTTCACATCCAAGCATTTGGGTAACAATGGTGTGAATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR CCA 90 bp AACCTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACCAGTGTACTCCGTGCTaGAAGAAGGAAACTGAAAGG +
Preference number: 4 (lower is better)
Translates to: NLFQLRAKAQEVDSHLRNQCTPC*KKETER
Trigger: CCTTTCAGTTTCCTTCTTCCAGCACGGAGTACACTG...GTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566848.5
CDS-3UTR CCA 90 bp AACCTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAGGCCACACAGTAAGTaGCAGAGCCAGAACAAGAAT +
Preference number: 4 (lower is better)
Translates to: NLFQLRAKAQEVDSHLRNRPHSK*QSQNKN
Trigger: ATTCTTGTTCTGGCTCTGCCACTTACTGTGTGGCCT...GTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566848.5
CDS-3UTR TCA 90 bp CCTTATTTGATGGAATTAAGAGATAGGGTCATGTTTTCTGTTTTACAGATGAGGCTCGCCACTTCCCTGTaGCTGTCCCATTCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PYLMELRDRVMFSVLQMRLATSL*LSHSWD
Trigger: GTCCCAGGAATGGGACAGTCACAGGGAAGTGGCGAG...CCTCATCTGTAAAACAGAAAACATGACCCTATCTCTTAATTCCATCAAATAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS-3UTR TCA 90 bp AAATCACAATGTTGCTTGAAAGAAGTCAGCCACAAAAGAATGTGTATGATTCTGCTCGCCACTTCCCTGTaGCTGTCCCATTCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: KSQCCLKEVSHKRMCMILLATSL*LSHSWD
Trigger: GTCCCAGGAATGGGACAGTCACAGGGAAGTGGCGAG...CAGAATCATACACATTCTTTTGTGGCTGACTTCTTTCAAGCAACATTGTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR TCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGCAAGGCCCAAGAAGTTaGTTCACACCTGAGAAACAA +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKQGPRS*FTPEKQ
Trigger: TTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTG...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR GCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGAAGGACCAGTTGTCCTaGAGAAGATCCTTTCAATCC +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKKDQLS*RRSFQS
Trigger: GGATTGAAAGGATCTTCTGCAGGACAACTGGTCCTT...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR GCA 90 bp TTTAGACACTTGTTCTACGTCACACAGCCCCCAAGGCAGGGTTATAAAACCTGTAAGGACCAGTTGTCCTaGAGAAGATCCTTTCAATCC +
Preference number: 4 (lower is better)
Translates to: FRHLFYVTQPPRQGYKTCKDQLS*RRSFQS
Trigger: GGATTGAAAGGATCTTCTGCAGGACAACTGGTCCTT...ACAGGTTTTATAACCCTGCCTTGGGGGCTGTGTGACGTAGAACAAGTGTCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS-3UTR GCA 90 bp ACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTAAAATCACAATGTTGCTTCGGGAACTAGGCCAGTaGCCTCAGAGCCGGGTTCTA +
Preference number: 4 (lower is better)
Translates to: TQMLGCELVMSLKITMLLRELGQ*PQSRVL
Trigger: TAGAACCCGGCTCTGAGGGCACTGGCCTAGTTCCCG...AAGCAACATTGTGATTTTAAGACTCATAACTAGTTCACATCCAAGCATTTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR GCA 90 bp GTAAACAACAATAGCTGTCACTTATCAAATCTCTATGTCCCAGGCAATGTGCTGATGTCCCAGGCAATGTaGTGGGCACTTCACGGTCAT +
Preference number: 4 (lower is better)
Translates to: VNNNSCHLSNLYVPGNVLMSQAM*WALHGH
Trigger: ATGACCGTGAAGTGCCCAGCACATTGCCTGGGACAT...CAGCACATTGCCTGGGACATAGAGATTTGATAAGTGACAGCTATTGTTGTTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS-3UTR CCA 90 bp ACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTAAAATCACAATGTTGCTTAAAGAGACCCAGTCCTaGGGGATGTCAGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: TQMLGCELVMSLKITMLLKETQS*GMSGLR
Trigger: GCGCAGCCCTGACATCCCCCAGGACTGGGTCTCTTT...AAGCAACATTGTGATTTTAAGACTCATAACTAGTTCACATCCAAGCATTTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR CCA 90 bp AAGTTGATTCACACCATTGTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCCCAGGACTGTGGCCTaGAATGTCCGGGTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: KLIHTIVTQMLGCELVMSPRTVA*NVRVLF
Trigger: GAACAAGACCCGGACATTCCAGGCCACAGTCCTGGG...ACTCATAACTAGTTCACATCCAAGCATTTGGGTAACAATGGTGTGAATCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR CCA 90 bp CACACCATTGTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTAAAATCGACTTCCCAGGACTGTaGCCTGGAATGTCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: HTIVTQMLGCELVMSLKIDFPGL*PGMSGS
Trigger: AGACCCGGACATTCCAGGCCACAGTCCTGGGAAGTC...GATTTTAAGACTCATAACTAGTTCACATCCAAGCATTTGGGTAACAATGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR CCA 90 bp CACACCATTGTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTAAAATCCCTCTGAGCAGGATATaGGTGGCTGGCTGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: HTIVTQMLGCELVMSLKIPLSRI*VAGWRV
Trigger: TACCCTCCAGCCAGCCACCCATATCCTGCTCAGAGG...GATTTTAAGACTCATAACTAGTTCACATCCAAGCATTTGGGTAACAATGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR TCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGAAGTTGATTCACACCTaGGAAACAAGTCGGGAACTA +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKKLIHT*ETSREL
Trigger: TAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTT...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR TCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGGCTGCATTTCATTTCTaGAGTAATCTAAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKAAFHF*SNLSGG
Trigger: GCCTCCACTTAGATTACTTCAGAAATGAAATGCAGC...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566848.5
CDS-3UTR GCA 90 bp AACCTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACTTCAACTCCCTGCACTaGTGGATAAATATTTGCTGC +
Preference number: 4 (lower is better)
Translates to: NLFQLRAKAQEVDSHLRNFNSLH*WINICC
Trigger: GCAGCAAATATTTATCCAGCAGTGCAGGGAGTTGAA...GTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566848.5
CDS-3UTR CCA 90 bp CCTTATTTGATGGAATTAAGAGATAGGGTCATGTTTTCTGTTTTACAGATGAGGCCCAGGACTGTGGCCTaGAATGTCCGGGTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: PYLMELRDRVMFSVLQMRPRTVA*NVRVLF
Trigger: GAACAAGACCCGGACATTCCAGGCCACAGTCCTGGG...CCTCATCTGTAAAACAGAAAACATGACCCTATCTCTTAATTCCATCAAATAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS-3UTR CCA 90 bp AAGTTGATTCACACCATTGTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCAGGATATGGGTGGCTaGCTGGAGGGTAGGATTCCT +
Preference number: 4 (lower is better)
Translates to: KLIHTIVTQMLGCELVMSQDMGG*LEGRIP
Trigger: AGGAATCCTACCCTCCAGCCAGCCACCCATATCCTG...ACTCATAACTAGTTCACATCCAAGCATTTGGGTAACAATGGTGTGAATCAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR TCA 90 bp CCTTATTTGATGGAATTAAGAGATAGGGTCATGTTTTCTGTTTTACAGATGAGGCCTTTCAATCCCATCTaGCTTCCCAGGACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: PYLMELRDRVMFSVLQMRPFNPI*LPRTVA
Trigger: GGCCACAGTCCTGGGAAGTCAGATGGGATTGAAAGG...CCTCATCTGTAAAACAGAAAACATGACCCTATCTCTTAATTCCATCAAATAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS-3UTR TCA 90 bp ACCATTGTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTAAAATCACACCTTTCAATCCCATCTaGCTTCCCAGGACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: TIVTQMLGCELVMSLKITPFNPI*LPRTVA
Trigger: GGCCACAGTCCTGGGAAGTCAGATGGGATTGAAAGG...TGTGATTTTAAGACTCATAACTAGTTCACATCCAAGCATTTGGGTAACAATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR CCA 90 bp GTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTAAAATCACAATGTTGGCAGCAGGATCAAAGTaGCACAGACCAGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: VTQMLGCELVMSLKITMLAAGSK*HRPEVG
Trigger: ACCCACCTCTGGTCTGTGCCACTTTGATCCTGCTGC...CAACATTGTGATTTTAAGACTCATAACTAGTTCACATCCAAGCATTTGGGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR CCA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGAACTCCCTGCACTGCTaGATAAATATTTGCTGCATT +
Preference number: 4 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKNSLHC*INICCI
Trigger: AATGCAGCAAATATTTATCCAGCAGTGCAGGGAGTT...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566848.5
CDS-3UTR TCA 90 bp AACCTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACCTTTCTGTTATTCACTaGCTCTGTGAGCTTAAGAAT +
Preference number: 4 (lower is better)
Translates to: NLFQLRAKAQEVDSHLRNLSVIH*LCELKN
Trigger: ATTCTTAAGCTCACAGAGTCAGTGAATAACAGAAAG...GTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566848.5
CDS-3UTR CCA 90 bp ATGGAATTAAGAGATAGGGTCATGTTTTCTGTTTTACAGATGAGGATGCTGACAGGTCTTGTTCCTGTCTaGACCGTCTCCGAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: MELRDRVMFSVLQMRMLTGLVPV*TVSEVQ
Trigger: TTGAACTTCGGAGACGGTCCAGACAGGAACAAGACC...TGTCAGCATCCTCATCTGTAAAACAGAAAACATGACCCTATCTCTTAATTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS-3UTR CCA 90 bp TTGATTCACACCATTGTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTGGTCTTGTTCCTGTCTaGACCGTCTCCGAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LIHTIVTQMLGCELVMSLGLVPV*TVSEVQ
Trigger: TTGAACTTCGGAGACGGTCCAGACAGGAACAAGACC...AAGACTCATAACTAGTTCACATCCAAGCATTTGGGTAACAATGGTGTGAATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR CCA 90 bp GTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTAAAATCACAATGTTGATATGGGTGGCTGGCTaGAGGGTAGGATTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: VTQMLGCELVMSLKITMLIWVAG*RVGFLE
Trigger: TTCCAGGAATCCTACCCTCCAGCCAGCCACCCATAT...CAACATTGTGATTTTAAGACTCATAACTAGTTCACATCCAAGCATTTGGGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570255.6
3UTR CAA 72 bp GTAATTAGAAAAATATTGAATGCTGACGGTGTCAAATaGTTCCCAGTCCCTAAGGGAGAGCTGTGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: VIRKILNADGVK*FPVPKGELWLK
Trigger: CTTCAACCACAGCTCTCCCTTAGGGACTGGGAACAATTTGACACCGTCAGCATTCAATATTTTTCTAATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR CCA 90 bp TTGATGGAATTAAGAGATAGGGTCATGTTTTCTGTTTTACAGATGAGGATGCTGAGCACAAGGCCTTCATaGCTCCAGACACTAACACAT +
Preference number: 4 (lower is better)
Translates to: LMELRDRVMFSVLQMRMLSTRPS*LQTLTH
Trigger: ATGTGTTAGTGTCTGGAGCCATGAAGGCCTTGTGCT...CAGCATCCTCATCTGTAAAACAGAAAACATGACCCTATCTCTTAATTCCATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS-3UTR TCA 90 bp GTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTAAAATCACAATGTTGCAAGGCCCAAGAAGTTaGTTCACACCATTGTTACCC +
Preference number: 4 (lower is better)
Translates to: VTQMLGCELVMSLKITMLQGPRS*FTPLLP
Trigger: GGGTAACAATGGTGTGAATCAACTTCTTGGGCCTTG...CAACATTGTGATTTTAAGACTCATAACTAGTTCACATCCAAGCATTTGGGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR GCA 90 bp AAGTTGATTCACACCATTGTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTAAGGACCAGTTGTCCTaGAGAAGATCCTTTCAATCC +
Preference number: 4 (lower is better)
Translates to: KLIHTIVTQMLGCELVMSKDQLS*RRSFQS
Trigger: GGATTGAAAGGATCTTCTGCAGGACAACTGGTCCTT...ACTCATAACTAGTTCACATCCAAGCATTTGGGTAACAATGGTGTGAATCAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR CCA 90 bp ACCATTGTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTAAAATCACAAGCACAAGGCCTTCATaGCTCCAGACACTAACACAT +
Preference number: 4 (lower is better)
Translates to: TIVTQMLGCELVMSLKITSTRPS*LQTLTH
Trigger: ATGTGTTAGTGTCTGGAGCCATGAAGGCCTTGTGCT...TGTGATTTTAAGACTCATAACTAGTTCACATCCAAGCATTTGGGTAACAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR TCA 90 bp TTGATTCACACCATTGTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTGTGTATGATTCTGTCTaGGAAACAAGTCGGGAACTA +
Preference number: 4 (lower is better)
Translates to: LIHTIVTQMLGCELVMSLVYDSV*ETSREL
Trigger: TAGTTCCCGACTTGTTTCTCAGACAGAATCATACAC...AAGACTCATAACTAGTTCACATCCAAGCATTTGGGTAACAATGGTGTGAATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570255.6
3UTR CAA 72 bp GGATGTGAACTAGTTATGAGTCTTAAAATCACAATGTaGCTTGAAAGAAGTCAGCCACAAAAGAATGTGTAT +
Preference number: 4 (lower is better)
Translates to: GCELVMSLKITM*LERSQPQKNVY
Trigger: ATACACATTCTTTTGTGGCTGACTTCTTTCAAGCAACATTGTGATTTTAAGACTCATAACTAGTTCACATCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS CCA 90 bp GGGCCAGACACAGGTGCAGGTTGTGCCCTGCCTGGCAGTTGCCCATaGGGAGCAGAGGGGGCTGAGCCTCCGGGGAGAGCCTGCCCTCGG +
Preference number: 5 (lower is better)
Translates to: GPDTGAGCALPGSCP*GAEGAEPPGRACPR
Trigger: CCGAGGGCAGGCTCTCCCCGGAGGCTCAGCCCCCTCTGCTCCCCATGGGCAACTGCCAGGCAGGGCACAACCTGCACCTGTGTCTGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000561899.6
ENST00000570255.6
CDS CCA 90 bp GGGCCAGACACAGGTGCAGGTTGTGCCCTGCCTGGCAGTTGCCCATaGGGAGCAGAGGGGGCTGAGCCTCCGGGGAGAGCCTGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: GPDTGAGCALPGSCP*GAEGAEPPGRACWK
Trigger: CTTCCAGCAGGCTCTCCCCGGAGGCTCAGCCCCCTCTGCTCCCCATGGGCAACTGCCAGGCAGGGCACAACCTGCACCTGTGTCTGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566848.5
CDS CCA 90 bp AGTCGGGAACTAGGCCAGTGCCCTCAGAGCCGGGTTCTAGACCAGTaGGACTCCCGGCGCGGGTGGAAGCACATAGCAGTGACACAGCAG +
Preference number: 5 (lower is better)
Translates to: SRELGQCPQSRVLDQ*DSRRGWKHIAVTQQ
Trigger: CTGCTGTGTCACTGCTATGTGCTTCCACCCGCGCCGGGAGTCCCACTGGTCTAGAACCCGGCTCTGAGGGCACTGGCCTAGTTCCCGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000561899.6
ENST00000566848.5
ENST00000569481.1
ENST00000570255.6
CDS CCA 90 bp AGAGAGGCCAAGGAGCAGCAGGATCAAAGTGGCACAGACCAGAGGTaGGTGGTGGGCCAGACACAGGTGCAGGTTGTGCCCTGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: REAKEQQDQSGTDQR*VVGQTQVQVVPCLA
Trigger: TGCCAGGCAGGGCACAACCTGCACCTGTGTCTGGCCCACCACCCACCTCTGGTCTGTGCCACTTTGATCCTGCTGCTCCTTGGCCTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000561899.6
ENST00000566848.5
ENST00000570255.6
ENST00000575829.6
CDS CCA 90 bp TGCCCTCAGAGCCGGGTTCTAGACCAGTGGGACTCCCGGCGCGGGTaGAAGCACATAGCAGTGACACAGCAGAGAAGGCCACAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: CPQSRVLDQWDSRRG*KHIAVTQQRRPQKR
Trigger: TCTCTTCTGTGGCCTTCTCTGCTGTGTCACTGCTATGTGCTTCCACCCGCGCCGGGAGTCCCACTGGTCTAGAACCCGGCTCTGAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000561899.6
ENST00000566848.5
ENST00000569481.1
ENST00000570255.6
CDS TCA 90 bp TCTGGACCGTCTCCGAAGTTCAAGGTGGTCAGCAAGCCCACGACGTaGGACCCTCGCCACTTCCCTGTGACTGTCCCATTCCTGGGACAC +
Preference number: 5 (lower is better)
Translates to: SGPSPKFKVVSKPTT*DPRHFPVTVPFLGH
Trigger: GTGTCCCAGGAATGGGACAGTCACAGGGAAGTGGCGAGGGTCTCACGTCGTGGGCTTGCTGACCACCTTGAACTTCGGAGACGGTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000561899.6
ENST00000566848.5
ENST00000569445.2
ENST00000569481.1
ENST00000570255.6
ENST00000575829.6
CDS CCA 90 bp ACTTCCCAGGACTGTGGCCTGGAATGTCCGGGTCTTGTTCCTGTCTaGACCGTCTCCGAAGTTCAAGGTGGTCAGCAAGCCCACGACGTG +
Preference number: 5 (lower is better)
Translates to: TSQDCGLECPGLVPV*TVSEVQGGQQAHDV
Trigger: CACGTCGTGGGCTTGCTGACCACCTTGAACTTCGGAGACGGTCCAGACAGGAACAAGACCCGGACATTCCAGGCCACAGTCCTGGGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000561899.6
ENST00000566848.5
ENST00000569445.2
ENST00000569481.1
ENST00000570255.6
ENST00000575829.6
CDS CCA 90 bp GCCAGCTCCTCCGAGGTGAGCAGCTTGGTCAGCACAAGGCCTTCATaGCTCCAGACACTAACACATTCCTCACCCATTCTAGGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: ASSSEVSSLVSTRPS*LQTLTHSSPILGLR
Trigger: CCTGAGCCCTAGAATGGGTGAGGAATGTGTTAGTGTCTGGAGCCATGAAGGCCTTGTGCTGACCAAGCTGCTCACCTCGGAGGAGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000561899.6
ENST00000566848.5
ENST00000570255.6
CDS CCA 90 bp CAGAGCCAGCTCCTCCTTTCAATCCCATCTGACTTCCCAGGACTGTaGCCTGGAATGTCCGGGTCTTGTTCCTGTCTGGACCGTCTCCGA +
Preference number: 5 (lower is better)
Translates to: QSQLLLSIPSDFPGL*PGMSGSCSCLDRLR
Trigger: TCGGAGACGGTCCAGACAGGAACAAGACCCGGACATTCCAGGCCACAGTCCTGGGAAGTCAGATGGGATTGAAAGGAGGAGCTGGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569481.1
CDS-3UTR CAA 90 bp ACTCAGAAGCAGCAGTCTTTGAGGAAAAGTCCAAGGATCTGCTCTACCCCGGTTTGCCCTGCCTGGCAGTaGCCCATGGGGAGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: TQKQQSLRKSPRICSTPVCPAWQ*PMGSRG
Trigger: CCCTCTGCTCCCCATGGGCAACTGCCAGGCAGGGCA...AACCGGGGTAGAGCAGATCCTTGGACTTTTCCTCAAAGACTGCTGCTTCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS CCA 90 bp AGAGCCAGCTCCGAGGTGAGCAGCTTGGTCAGCACAAGGCCTTCATaGCTCCAGACACTAACACATTCCTCACCCATTCTAGGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: RASSEVSSLVSTRPS*LQTLTHSSPILGLR
Trigger: CCTGAGCCCTAGAATGGGTGAGGAATGTGTTAGTGTCTGGAGCCATGAAGGCCTTGTGCTGACCAAGCTGCTCACCTCGGAGCTGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575829.6
CDS-3UTR CAA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCAGACACAGGTGCAGGTaGTGCCCTGCCTGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPRHRCR*CPAWQL
Trigger: CAACTGCCAGGCAGGGCACAACCTGCACCTGTGTCT...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS TCA 90 bp GATACAGTAGTCAGCAGGCAGTCTACAAAACCCTGGCGACCCATCTaGGGCTCTTACCGAGGTGAGCAGCTTGGTCAGCACAAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: DTVVSRQSTKPWRPI*GSYRGEQLGQHKAF
Trigger: GAAGGCCTTGTGCTGACCAAGCTGCTCACCTCGGTAAGAGCCTCAGATGGGTCGCCAGGGTTTTGTAGACTGCCTGCTGACTACTGTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS CCA 90 bp GTCCTGCAGAAGATCCTTTCAATCCCATCTGACTTCCCAGGACTGTaGCCTGGAATGTCCGGGTCTTGTTCCTGTCTGGACCGTCTCCGA +
Preference number: 5 (lower is better)
Translates to: VLQKILSIPSDFPGL*PGMSGSCSCLDRLR
Trigger: TCGGAGACGGTCCAGACAGGAACAAGACCCGGACATTCCAGGCCACAGTCCTGGGAAGTCAGATGGGATTGAAAGGATCTTCTGCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000561899.6
ENST00000566848.5
ENST00000569445.2
ENST00000570255.6
ENST00000575829.6
CDS CCA 90 bp AGGGTGGCATTTCCAGCCCCCTCCTCTGAGCAGGATATGGGTGGCTaGCTGGAGGGTAGGATTCCTGGAACAGCACTAAAATATAGGCAG +
Preference number: 5 (lower is better)
Translates to: RVAFPAPSSEQDMGG*LEGRIPGTALKYRQ
Trigger: CTGCCTATATTTTAGTGCTGTTCCAGGAATCCTACCCTCCAGCCAGCCACCCATATCCTGCTCAGAGGAGGGGGCTGGAAATGCCACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000561899.6
ENST00000566848.5
ENST00000569445.2
ENST00000570255.6
ENST00000575829.6
CDS CCA 90 bp GAGGCTCTTACCGAGGTGAGCAGCTTGGTCAGCACAAGGCCTTCATaGCTCCAGACACTAACACATTCCTCACCCATTCTAGGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: EALTEVSSLVSTRPS*LQTLTHSSPILGLR
Trigger: CCTGAGCCCTAGAATGGGTGAGGAATGTGTTAGTGTCTGGAGCCATGAAGGCCTTGTGCTGACCAAGCTGCTCACCTCGGTAAGAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS-3UTR CAA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGTGCCCTGCCTGGCAGTaGCCCATGGGGAGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKCPAWQ*PMGSRG
Trigger: CCCTCTGCTCCCCATGGGCAACTGCCAGGCAGGGCA...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CAA 90 bp AACCTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACTGCCCTGCCTGGCAGTaGCCCATGGGGAGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: NLFQLRAKAQEVDSHLRNCPAWQ*PMGSRG
Trigger: CCCTCTGCTCCCCATGGGCAACTGCCAGGCAGGGCA...GTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CAA 90 bp GGAGAGCTGTGGTTGAAGAGGTTCTCGGGGACTCAGAAGCAGCAGTCTTTGAGGTGGAATGTCCGGGTCTaGTTCCTGTCTGGACCGTCT +
Preference number: 5 (lower is better)
Translates to: GELWLKRFSGTQKQQSLRWNVRV*FLSGPS
Trigger: AGACGGTCCAGACAGGAACAAGACCCGGACATTCCA...CCTCAAAGACTGCTGCTTCTGAGTCCCCGAGAACCTCTTCAACCACAGCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR CAA 90 bp GTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCTCAGAGCCGTGGAATGTCCGGGTCTaGTTCCTGTCTGGACCGTCT +
Preference number: 5 (lower is better)
Translates to: VDSHLRNKSGTRPVPSEPWNVRV*FLSGPS
Trigger: AGACGGTCCAGACAGGAACAAGACCCGGACATTCCA...CGGCTCTGAGGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569481.1
CDS TCA 90 bp TCAGCTGGAGAAACAGGAAGCACTGTTCTGGGGCGAGGATTTGGCTaGGGAATAGTTCCAGCCAGAGCCCAGACAAGGGAAGACTCTGGA +
Preference number: 5 (lower is better)
Translates to: SAGETGSTVLGRGFG*GIVPARAQTREDSG
Trigger: TCCAGAGTCTTCCCTTGTCTGGGCTCTGGCTGGAACTATTCCTCAGCCAAATCCTCGCCCCAGAACAGTGCTTCCTGTTTCTCCAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566848.5
CDS-3UTR CAA 90 bp GCCCAAGAAGTTGATTCACACCTGAGAAACAAGTCGGGAACTAGGCCAGTGCCCTGGAATGTCCGGGTCTaGTTCCTGTCTGGACCGTCT +
Preference number: 5 (lower is better)
Translates to: AQEVDSHLRNKSGTRPVPWNVRV*FLSGPS
Trigger: AGACGGTCCAGACAGGAACAAGACCCGGACATTCCA...GGGCACTGGCCTAGTTCCCGACTTGTTTCTCAGGTGTGAATCAACTTCTTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS-3UTR CAA 90 bp GGAGAGCTGTGGTTGAAGAGGTTCTCGGGGACTCAGAAGCAGCAGTCTTTGAGGGCTGACGGTGTCAAATaGTTCCCAGTCCCTAAGGGA +
Preference number: 5 (lower is better)
Translates to: GELWLKRFSGTQKQQSLRADGVK*FPVPKG
Trigger: TCCCTTAGGGACTGGGAACAATTTGACACCGTCAGC...CCTCAAAGACTGCTGCTTCTGAGTCCCCGAGAACCTCTTCAACCACAGCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR CAA 90 bp GTCCCTAAGGGAGAGCTGTGGTTGAAGAGGTTCTCGGGGACTCAGAAGCAGCAGCAGAAGCAGCAGTCTTaGAGGAAAAGTCCAAGGATC +
Preference number: 5 (lower is better)
Translates to: VPKGELWLKRFSGTQKQQQKQQS*RKSPRI
Trigger: GATCCTTGGACTTTTCCTCAAAGACTGCTGCTTCTG...CTGCTGCTTCTGAGTCCCCGAGAACCTCTTCAACCACAGCTCTCCCTTAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR CAA 90 bp GTCACTTATCAAATCTCTATGTCCCAGGCAATGTGCTGGGCACTTCACGGTCATTGGAATGTCCGGGTCTaGTTCCTGTCTGGACCGTCT +
Preference number: 5 (lower is better)
Translates to: VTYQISMSQAMCWALHGHWNVRV*FLSGPS
Trigger: AGACGGTCCAGACAGGAACAAGACCCGGACATTCCA...ATGACCGTGAAGTGCCCAGCACATTGCCTGGGACATAGAGATTTGATAAGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS-3UTR CAA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGTGGAATGTCCGGGTCTaGTTCCTGTCTGGACCGTCT +
Preference number: 5 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKWNVRV*FLSGPS
Trigger: AGACGGTCCAGACAGGAACAAGACCCGGACATTCCA...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
ENST00000569481.1
CDS CCA 90 bp GAAAGCTCAGAGAAGACAAAGGACTTCCCAAGGCCACACAGTAAGTaGCAGAGCCAGAACAAGAATCCAAGGTTCCCGACTCCAAAAGTT +
Preference number: 5 (lower is better)
Translates to: ESSEKTKDFPRPHSK*QSQNKNPRFPTPKV
Trigger: AACTTTTGGAGTCGGGAACCTTGGATTCTTGTTCTGGCTCTGCCACTTACTGTGTGGCCTTGGGAAGTCCTTTGTCTTCTCTGAGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566848.5
CDS-3UTR CAA 90 bp CTAGTTATGAGTCTTAAAATCACAATGTTGCTTGAAAGAAGTCAGCCACAAAAGTGCCCTGCCTGGCAGTaGCCCATGGGGAGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: LVMSLKITMLLERSQPQKCPAWQ*PMGSRG
Trigger: CCCTCTGCTCCCCATGGGCAACTGCCAGGCAGGGCA...CTTTTGTGGCTGACTTCTTTCAAGCAACATTGTGATTTTAAGACTCATAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR CAA 90 bp CAGAAGCAGCAGTCTTTGAGGAAAAGTCCAAGGATCTGCTCTACCCCGGTTACATGTGATAAGGACCAGTaGTCCTGCAGAAGATCCTTT +
Preference number: 5 (lower is better)
Translates to: QKQQSLRKSPRICSTPVTCDKDQ*SCRRSF
Trigger: AAAGGATCTTCTGCAGGACAACTGGTCCTTATCACA...TGTAACCGGGGTAGAGCAGATCCTTGGACTTTTCCTCAAAGACTGCTGCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561899.6
CDS-3UTR CAA 90 bp CTCTATGTCCCAGGCAATGTGCTGGGCACTTCACGGTCATTCTCATTTAATCCTTGTGATAAGGACCAGTaGTCCTGCAGAAGATCCTTT +
Preference number: 5 (lower is better)
Translates to: LYVPGNVLGTSRSFSFNPCDKDQ*SCRRSF
Trigger: AAAGGATCTTCTGCAGGACAACTGGTCCTTATCACA...AGGATTAAATGAGAATGACCGTGAAGTGCCCAGCACATTGCCTGGGACATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS-3UTR CAA 90 bp CTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACAAGTGTGATAAGGACCAGTaGTCCTGCAGAAGATCCTTT +
Preference number: 5 (lower is better)
Translates to: LFQLRAKAQEVDSHLRNKCDKDQ*SCRRSF
Trigger: AAAGGATCTTCTGCAGGACAACTGGTCCTTATCACA...CTTGTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CAA 90 bp AACCTTTTCCAACTCAGAGCCAAGGCCCAAGAAGTTGATTCACACCTGAGAAACTGTGATAAGGACCAGTaGTCCTGCAGAAGATCCTTT +
Preference number: 5 (lower is better)
Translates to: NLFQLRAKAQEVDSHLRNCDKDQ*SCRRSF
Trigger: AAAGGATCTTCTGCAGGACAACTGGTCCTTATCACA...GTTTCTCAGGTGTGAATCAACTTCTTGGGCCTTGGCTCTGAGTTGGAAAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000566848.5
CDS-3UTR CAA 90 bp TTGATTCACACCATTGTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTTGGAATGTCCGGGTCTaGTTCCTGTCTGGACCGTCT +
Preference number: 5 (lower is better)
Translates to: LIHTIVTQMLGCELVMSLWNVRV*FLSGPS
Trigger: AGACGGTCCAGACAGGAACAAGACCCGGACATTCCA...AAGACTCATAACTAGTTCACATCCAAGCATTTGGGTAACAATGGTGTGAATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR CAA 90 bp TTGATTCACACCATTGTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTTGTGATAAGGACCAGTaGTCCTGCAGAAGATCCTTT +
Preference number: 5 (lower is better)
Translates to: LIHTIVTQMLGCELVMSLCDKDQ*SCRRSF
Trigger: AAAGGATCTTCTGCAGGACAACTGGTCCTTATCACA...AAGACTCATAACTAGTTCACATCCAAGCATTTGGGTAACAATGGTGTGAATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR CAA 90 bp GTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTAAAATCACAATGTTGCCAAGGCCCAAGAAGTaGATTCACACCATTGTTACC +
Preference number: 5 (lower is better)
Translates to: VTQMLGCELVMSLKITMLPRPKK*IHTIVT
Trigger: GGTAACAATGGTGTGAATCAACTTCTTGGGCCTTGG...CAACATTGTGATTTTAAGACTCATAACTAGTTCACATCCAAGCATTTGGGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR CAA 90 bp TTGATTCACACCATTGTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTAAATCACAATGTTGCTaGAAAGAAGTCAGCCACAAA +
Preference number: 5 (lower is better)
Translates to: LIHTIVTQMLGCELVMSLKSQCC*KEVSHK
Trigger: TTTGTGGCTGACTTCTTTCAAGCAACATTGTGATTT...AAGACTCATAACTAGTTCACATCCAAGCATTTGGGTAACAATGGTGTGAATCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS-3UTR CAA 90 bp ACCATTGTTACCCAAATGCTTGGATGTGAACTAGTTATGAGTCTTAAAATCACACTTAAAATCACAATGTaGCTTGAAAGAAGTCAGCCA +
Preference number: 5 (lower is better)
Translates to: TIVTQMLGCELVMSLKITLKITM*LERSQP
Trigger: TGGCTGACTTCTTTCAAGCAACATTGTGATTTTAAG...TGTGATTTTAAGACTCATAACTAGTTCACATCCAAGCATTTGGGTAACAATGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570255.6
CDS CCA 72 bp CTAGGCCAGTGCCCTCAGAGCCGGGTTCTAGACCAGTaGGACTCCCGGCGCGGGTGGAAGCACATAGCAGTG +
Preference number: 6 (lower is better)
Translates to: LGQCPQSRVLDQ*DSRRGWKHIAV
Trigger: CACTGCTATGTGCTTCCACCCGCGCCGGGAGTCCCACTGGTCTAGAACCCGGCTCTGAGGGCACTGGCCTAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000561899.6
ENST00000566848.5
ENST00000569481.1
ENST00000570255.6
CDS TCA 72 bp GCAAGCCCACGACGTGAGACCCTCGCCACTTCCCTGTaGCTGTCCCATTCCTGGGACACAGGGTCAGCTGGC +
Preference number: 6 (lower is better)
Translates to: ASPRRETLATSL*LSHSWDTGSAG
Trigger: GCCAGCTGACCCTGTGTCCCAGGAATGGGACAGTCACAGGGAAGTGGCGAGGGTCTCACGTCGTGGGCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000561899.6
ENST00000566848.5
ENST00000569445.2
ENST00000569481.1
ENST00000570255.6
ENST00000575829.6
CDS CCA 72 bp GGGTGGCATTTCCAGCCCCCTCCTCTGAGCAGGATATaGGTGGCTGGCTGGAGGGTAGGATTCCTGGAACAG +
Preference number: 6 (lower is better)
Translates to: GWHFQPPPLSRI*VAGWRVGFLEQ
Trigger: CTGTTCCAGGAATCCTACCCTCCAGCCAGCCACCCATATCCTGCTCAGAGGAGGGGGCTGGAAATGCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000561899.6
ENST00000566848.5
ENST00000569445.2
ENST00000570255.6
ENST00000575829.6
CDS TCA 72 bp TCTCCGAAGTTCAAGGTGGTCAGCAAGCCCACGACGTaGGACCCTCGCCACTTCCCTGTGACTGTCCCATTC +
Preference number: 6 (lower is better)
Translates to: SPKFKVVSKPTT*DPRHFPVTVPF
Trigger: GAATGGGACAGTCACAGGGAAGTGGCGAGGGTCTCACGTCGTGGGCTTGCTGACCACCTTGAACTTCGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000561899.6
ENST00000566848.5
ENST00000569445.2
ENST00000569481.1
ENST00000570255.6
ENST00000575829.6
CDS TCA 72 bp AAAACCCTGGCGACCCATCTGAGGCTCTTACCGAGGTaGGCAGCTTGGTCAGCACAAGGCCTTCATGGCTCC +
Preference number: 6 (lower is better)
Translates to: KTLATHLRLLPR*AAWSAQGLHGS
Trigger: GGAGCCATGAAGGCCTTGTGCTGACCAAGCTGCTCACCTCGGTAAGAGCCTCAGATGGGTCGCCAGGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS TCA 72 bp GTCAGCAGGCAGTCTACAAAACCCTGGCGACCCATCTaGGGCTCTTACCGAGGTGAGCAGCTTGGTCAGCAC +
Preference number: 6 (lower is better)
Translates to: VSRQSTKPWRPI*GSYRGEQLGQH
Trigger: GTGCTGACCAAGCTGCTCACCTCGGTAAGAGCCTCAGATGGGTCGCCAGGGTTTTGTAGACTGCCTGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS CCA 72 bp TCTTGTTCCTGTCTGGACCGTCTCCGAAGTTCAAGGTaGTCAGCAAGCCCACGACGTGAGACCCTCGCCACT +
Preference number: 6 (lower is better)
Translates to: SCSCLDRLRSSR*SASPRRETLAT
Trigger: AGTGGCGAGGGTCTCACGTCGTGGGCTTGCTGACCACCTTGAACTTCGGAGACGGTCCAGACAGGAACAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000561899.6
ENST00000566848.5
ENST00000569445.2
ENST00000569481.1
ENST00000570255.6
ENST00000575829.6
CDS CCA 72 bp GACTGTGGCCTGGAATGTCCGGGTCTTGTTCCTGTCTaGACCGTCTCCGAAGTTCAAGGTGGTCAGCAAGCC +
Preference number: 6 (lower is better)
Translates to: DCGLECPGLVPV*TVSEVQGGQQA
Trigger: GGCTTGCTGACCACCTTGAACTTCGGAGACGGTCCAGACAGGAACAAGACCCGGACATTCCAGGCCACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000561899.6
ENST00000566848.5
ENST00000569445.2
ENST00000569481.1
ENST00000570255.6
ENST00000575829.6
CDS CCA 72 bp TTTCCAGCCCCCTCCTCTGAGCAGGATATGGGTGGCTaGCTGGAGGGTAGGATTCCTGGAACAGCACTAAAA +
Preference number: 6 (lower is better)
Translates to: FPAPSSEQDMGG*LEGRIPGTALK
Trigger: TTTTAGTGCTGTTCCAGGAATCCTACCCTCCAGCCAGCCACCCATATCCTGCTCAGAGGAGGGGGCTGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000561899.6
ENST00000566848.5
ENST00000569445.2
ENST00000570255.6
ENST00000575829.6
CDS CCA 72 bp CTCCTCCTTTCAATCCCATCTGACTTCCCAGGACTGTaGCCTGGAATGTCCGGGTCTTGTTCCTGTCTGGAC +
Preference number: 6 (lower is better)
Translates to: LLLSIPSDFPGL*PGMSGSCSCLD
Trigger: GTCCAGACAGGAACAAGACCCGGACATTCCAGGCCACAGTCCTGGGAAGTCAGATGGGATTGAAAGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569481.1
CDS TCA 72 bp ACCAGTTGTCCTGCAGAAGATCCTTTCAATCCCATCTaGCTTCCCAGGACTGTGGCCTGGAATGTCCGGGTC +
Preference number: 6 (lower is better)
Translates to: TSCPAEDPFNPI*LPRTVAWNVRV
Trigger: GACCCGGACATTCCAGGCCACAGTCCTGGGAAGTCAGATGGGATTGAAAGGATCTTCTGCAGGACAACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000561899.6
ENST00000566848.5
ENST00000569445.2
ENST00000570255.6
ENST00000575829.6
CDS TCA 72 bp GAAACAGGAAGCACTGTTCTGGGGCGAGGATTTGGCTaGGGAATAGTTCCAGCCAGAGCCCAGACAAGGGAA +
Preference number: 6 (lower is better)
Translates to: ETGSTVLGRGFG*GIVPARAQTRE
Trigger: TTCCCTTGTCTGGGCTCTGGCTGGAACTATTCCTCAGCCAAATCCTCGCCCCAGAACAGTGCTTCCTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566848.5
CDS CCA 72 bp AAGATCCTTTCAATCCCATCTGACTTCCCAGGACTGTaGCCTGGAATGTCCGGGTCTTGTTCCTGTCTGGAC +
Preference number: 6 (lower is better)
Translates to: KILSIPSDFPGL*PGMSGSCSCLD
Trigger: GTCCAGACAGGAACAAGACCCGGACATTCCAGGCCACAGTCCTGGGAAGTCAGATGGGATTGAAAGGATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000561899.6
ENST00000566848.5
ENST00000569445.2
ENST00000570255.6
ENST00000575829.6
CDS CCA 72 bp TCCGAGGTGAGCAGCTTGGTCAGCACAAGGCCTTCATaGCTCCAGACACTAACACATTCCTCACCCATTCTA +
Preference number: 6 (lower is better)
Translates to: SEVSSLVSTRPS*LQTLTHSSPIL
Trigger: TAGAATGGGTGAGGAATGTGTTAGTGTCTGGAGCCATGAAGGCCTTGTGCTGACCAAGCTGCTCACCTCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000561899.6
ENST00000566848.5
ENST00000570255.6
ENST00000575829.6
CDS CCA 72 bp ACCGAGGTGAGCAGCTTGGTCAGCACAAGGCCTTCATaGCTCCAGACACTAACACATTCCTCACCCATTCTA +
Preference number: 6 (lower is better)
Translates to: TEVSSLVSTRPS*LQTLTHSSPIL
Trigger: TAGAATGGGTGAGGAATGTGTTAGTGTCTGGAGCCATGAAGGCCTTGTGCTGACCAAGCTGCTCACCTCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569445.2
CDS CCA 72 bp GTCCGCGAAGCTCAGAAAGTCCCCCAGATTCCTCTGTaGTCAAGCCAGTTTCATTCAATTGAAGCTTGTTCC +
Preference number: 6 (lower is better)
Translates to: VREAQKVPQIPL*SSQFHSIEACS
Trigger: GGAACAAGCTTCAATTGAATGAAACTGGCTTGACCACAGAGGAATCTGGGGGACTTTCTGAGCTTCGCGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414689.6
CDS CAA 72 bp CCTTTCTGTGGTCACCCTGGCTGTGATAAGGACCAGTaGTCCTGCAGAAGATCCTTTCAATCCCATCTGACT +
Preference number: 6 (lower is better)
Translates to: PFCGHPGCDKDQ*SCRRSFQSHLT
Trigger: AGTCAGATGGGATTGAAAGGATCTTCTGCAGGACAACTGGTCCTTATCACAGCCAGGGTGACCACAGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279396.11
ENST00000414689.6
ENST00000561899.6
ENST00000566848.5
ENST00000569445.2
ENST00000570255.6
ENST00000575829.6