RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM214 (Homo sapiens)

Ensembl gene IDs: ENSG00000119777

Ensembl transcript IDs: ENST00000238788.14, ENST00000321326.11, ENST00000404032.7, ENST00000425720.5, ENST00000434544.1, ENST00000435172.6, ENST00000460665.1, ENST00000460904.1, ENST00000469445.1, ENST00000475258.5, ENST00000478980.1, ENST00000495312.1

Found 748 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CATTGGTGTGAGCCCAGGCCAGCTGCAAGCTGGGCCGCACCACGGTaGGCAGGTGGGAGCCCCAGAGCGGCAGTGTCTCCCCCAGCCAGC +
Preference number: 1 (lower is better)
Translates to: HWCEPRPAASWAAPR*AGGSPRAAVSPPAS
Trigger: GCTGGCTGGGGGAGACACTGCCGCTCTGGGGCTCCCACCTGCTCACCGTGGTGCGGCCCAGCTTGCAGCTGGCCTGGGCTCACACCAATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR GCA 90 bp TGCTCCAGCAGAAGGCTGGACTGTGACAGGTGCTTAGGGTACAGCTaGCTCCAGACGCTGGCACTGAGGGGGTCCACCGTCAGGCACTCA +
Preference number: 1 (lower is better)
Translates to: CSSRRLDCDRCLGYS*LQTLALRGSTVRHS
Trigger: TGAGTGCCTGACGGTGGACCCCCTCAGTGCCAGCGTCTGGAGGCAGCTGTACCCTAAGCACCTGTCACAGTCCAGCCTTCTGCTGGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR CCA 90 bp CGGCCAGTAAGGGAGGCCTGGAAGGAGCTGTGTGACCGGAGGTCATaGCACAGGAAGCCTACAGCGAAGACCAGCAGCAACAGGAGGAGC +
Preference number: 1 (lower is better)
Translates to: RPVREAWKELCDRRS*HRKPTAKTSSNRRS
Trigger: GCTCCTCCTGTTGCTGCTGGTCTTCGCTGTAGGCTTCCTGTGCCATGACCTCCGGTCACACAGCTCCTTCCAGGCCTCCCTTACTGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR CCA 90 bp GGCAGAGGGCAAGGGCGGAGTTGTGAGAGGCTACCAGCACAAGGATaGAGGCTGGGGGCCATGTGCAGTAGGGCCAGAAAAGTGTTCAGT +
Preference number: 1 (lower is better)
Translates to: GRGQGRSCERLPAQG*RLGAMCSRARKVFS
Trigger: ACTGAACACTTTTCTGGCCCTACTGCACATGGCCCCCAGCCTCCATCCTTGTGCTGGTAGCCTCTCACAACTCCGCCCTTGCCCTCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR CCA 90 bp GGCAAGGGCGGAGTTGTGAGAGGCTACCAGCACAAGGATGGAGGCTaGGGGCCATGTGCAGTAGGGCCAGAAAAGTGTTCAGTGGAATTG +
Preference number: 1 (lower is better)
Translates to: GKGGVVRGYQHKDGG*GPCAVGPEKCSVEL
Trigger: CAATTCCACTGAACACTTTTCTGGCCCTACTGCACATGGCCCCCAGCCTCCATCCTTGTGCTGGTAGCCTCTCACAACTCCGCCCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR GCA 90 bp CAGGTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTaGTCTGCTCTACAGATGATAGGAGGGATGGACAGTGGAGAGAAG +
Preference number: 1 (lower is better)
Translates to: QVDGGFPGPKAHNCL*SALQMIGGMDSGEK
Trigger: CTTCTCTCCACTGTCCATCCCTCCTATCATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR GCA 90 bp CTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTaGCTGTGCTCTGCTCTACAGATGATAGGAGGGATGGACAGTGGA +
Preference number: 1 (lower is better)
Translates to: LSQVDGGFPGPKAHN*LCSALQMIGGMDSG
Trigger: TCCACTGTCCATCCCTCCTATCATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCTGAGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR CCA 90 bp TTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTaGCCAGGAAGGCAGGGCCTACTGCTGGGATATCAGGGCAAGTGC +
Preference number: 1 (lower is better)
Translates to: FYPLQSWMVYPCRNQ*PGRQGLLLGYQGKC
Trigger: GCACTTGCCCTGATATCCCAGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
3UTR CCA 90 bp GACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATaGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTAC +
Preference number: 1 (lower is better)
Translates to: DSHEELPPSTRCSLG*STHAEISGQEGRAY
Trigger: GTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
3UTR GCA 90 bp TGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTaGTGGGATATCAGGGCAAGTGCCCAGTCCAAGAAAGCCACTGTA +
Preference number: 1 (lower is better)
Translates to: WSTHAEISGQEGRAY*WDIRASAQSKKATV
Trigger: TACAGTGGCTTTCTTGGACTGGGCACTTGCCCTGATATCCCAGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
3UTR GCA 90 bp AGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATaGAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTGCTGGGATAT +
Preference number: 1 (lower is better)
Translates to: RTATFYPLQSWMVYP*RNQWPGRQGLLLGY
Trigger: ATATCCCAGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
3UTR CCA 90 bp CAACTGCCTGTGCTCTGCTCTACAGATGATAGGAGGGATGGACAGTaGAGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGG +
Preference number: 1 (lower is better)
Translates to: QLPVLCSTDDRRDGQ*REAEPCDQDPQHDG
Trigger: CCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCTCCACTGTCCATCCCTCCTATCATCTGTAGAGCAGAGCACAGGCAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR CCA 90 bp TCCAAGAAAGCCACTGTAATGTCCTGTAGGCAAAGCCAGGTCCAGTaGACAGCCTCACTGAGCTGTGTCTTCATGCAGTCCCAGGTCACC +
Preference number: 1 (lower is better)
Translates to: SKKATVMSCRQSQVQ*TASLSCVFMQSQVT
Trigger: GGTGACCTGGGACTGCATGAAGACACAGCTCAGTGAGGCTGTCCACTGGACCTGGCTTTGCCTACAGGACATTACAGTGGCTTTCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
3UTR CCA 90 bp TCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTGCTaGGATATCAGGGCAAGTGCCCAGTCCAAGAAAGCCACTGTAATG +
Preference number: 1 (lower is better)
Translates to: STHAEISGQEGRAYC*DIRASAQSKKATVM
Trigger: CATTACAGTGGCTTTCTTGGACTGGGCACTTGCCCTGATATCCCAGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
3UTR TCA 90 bp GTGTCCTTTATTCCACCTGGTAGGGCATACCCAAGAACCATATACTaGGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCAAGGCA +
Preference number: 1 (lower is better)
Translates to: VSFIPPGRAYPRTIY*VLSQVDGGFPGPKA
Trigger: TGCCTTGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTGGGTATGCCCTACCAGGTGGAATAAAGGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
3UTR GCA 90 bp AGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTaGCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAG +
Preference number: 1 (lower is better)
Translates to: RRELRHQVKKTPMKN*HLLPAAVLDGLPMQ
Trigger: CTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
3UTR TCA 90 bp ACTTGCCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATaGAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTAC +
Preference number: 1 (lower is better)
Translates to: TCLGENSGTKLKRLP*RTATFYPLQSWMVY
Trigger: GTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGGCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
3UTR TCA 90 bp CTGCTACCCTTCCTCAGCAGCTCCTGGTTGGTAAGCTTGAGGGACTaGATGGTTTCTTGCAAAGACTTCTGTACCTTCTTGGGAATCTGC +
Preference number: 1 (lower is better)
Translates to: LLPFLSSSWLVSLRD*MVSCKDFCTFLGIC
Trigger: GCAGATTCCCAAGAAGGTACAGAAGTCTTTGCAAGAAACCATTCAGTCCCTCAAGCTTACCAACCAGGAGCTGCTGAGGAAGGGTAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR-3UTR TCA 90 bp AGGTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTGGGCCGCACCACGGTaGGCAGGTGGGAGCCCCAGA +
Preference number: 2 (lower is better)
Translates to: RLMEGSLGPRHTTACALLWAAPR*AGGSPR
Trigger: TCTGGGGCTCCCACCTGCTCACCGTGGTGCGGCCCA...GAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR-3UTR CCA 90 bp CCGCACCACGGTGAGCAGGTGGGAGCCCCAGAGCGGCAGTGTCTCCCCCAGCCACAAGAGGTGCCACAGTaGCAGCAGCACATTCTGGTG +
Preference number: 2 (lower is better)
Translates to: PHHGEQVGAPERQCLPQPQEVPQ*QQHILV
Trigger: CACCAGAATGTGCTGCTGCCACTGTGGCACCTCTTG...TGGCTGGGGGAGACACTGCCGCTCTGGGGCTCCCACCTGCTCACCGTGGTGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR-3UTR GCA 90 bp GGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTGCTGGCATGCCTCATGGCAGTaGTCCTGGGCCCAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: GWSTHAEISGQEGRAYCWHASWQ*SWAQAR
Trigger: CCTGGCCTGGGCCCAGGAGCACTGCCATGAGGCATG...CCAGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
3UTR-3UTR GCA 90 bp GAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCAGGCAACTGGCCACTTaGCTAGGAGAGAACTCAGGC +
Preference number: 2 (lower is better)
Translates to: ESCLRLMEGSLGPRHTTARQLAT*LGENSG
Trigger: GCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCT...GGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR-3UTR GCA 90 bp AGGTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCGAAGGCAGGGCCTACTaGTGGGATATCAGGGCAAGT +
Preference number: 2 (lower is better)
Translates to: RLMEGSLGPRHTTACALLEGRAY*WDIRAS
Trigger: ACTTGCCCTGATATCCCAGCAGTAGGCCCTGCCTTC...GAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR-3UTR CCA 90 bp AGGTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCGGGCTTAGAGGCATTTaGGGCAGGCTGGGCATTTTG +
Preference number: 2 (lower is better)
Translates to: RLMEGSLGPRHTTACALLGLRGI*GRLGIL
Trigger: CAAAATGCCCAGCCTGCCCCAAATGCCTCTAAGCCC...GAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR TCA 90 bp CAGGTCCAGTGGACAGCCTCACTGAGCTGTGTCTTCATGCAGTCCCAGGTCACCAGGCTGCTCAGGAGCTaGATGTGCTGTCTCTTGGGA +
Preference number: 2 (lower is better)
Translates to: QVQWTASLSCVFMQSQVTRLLRS*MCCLLG
Trigger: TCCCAAGAGACAGCACATTCAGCTCCTGAGCAGCCT...GGTGACCTGGGACTGCATGAAGACACAGCTCAGTGAGGCTGTCCACTGGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR-3UTR GCA 90 bp AAGGAAGTGGAAGGCAGAGGGCAAGGGCGGAGTTGTGAGAGGCTACCAGCACAAAGGCTGGGGGCCATGTaGAGTAGGGCCAGAAAAGTG +
Preference number: 2 (lower is better)
Translates to: KEVEGRGQGRSCERLPAQRLGAM*SRARKV
Trigger: CACTTTTCTGGCCCTACTGCACATGGCCCCCAGCCT...TTGTGCTGGTAGCCTCTCACAACTCCGCCCTTGCCCTCTGCCTTCCACTTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR-3UTR GCA 90 bp GATGGACAGTGGAGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGTGCTTAGGGTACAGCTaGCTCCAGACGCTGGCACTG +
Preference number: 2 (lower is better)
Translates to: DGQWREAEPCDQDPQHDGCLGYS*LQTLAL
Trigger: CAGTGCCAGCGTCTGGAGGCAGCTGTACCCTAAGCA...CCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCTCCACTGTCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR-3UTR CCA 90 bp AGGTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCATGGAAGAACTGAGGTaGAGGCAACTGGCCACTTGC +
Preference number: 2 (lower is better)
Translates to: RLMEGSLGPRHTTACALLMEELR*RQLATC
Trigger: GCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCAT...GAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR-3UTR CCA 90 bp CCACCAAAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAGGCTGAGATGCTGCTaGGCCCTGTCCCCACCAAAG +
Preference number: 2 (lower is better)
Translates to: PPKMEELRWRQLATCLGERLRCC*ALSPPK
Trigger: CTTTGGTGGGGACAGGGCCCAGCAGCATCTCAGCCT...CTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR-3UTR CCA 90 bp AGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGGCAGGGCCTACTGCTaGGATATCAGGGCAAGTGCC +
Preference number: 2 (lower is better)
Translates to: RTEVEATGHLPRRELRHQGRAYC*DIRASA
Trigger: GGCACTTGCCCTGATATCCCAGCAGTAGGCCCTGCC...TTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434544.1
3UTR-3UTR TCA 90 bp GGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTGTGGGTAGGAGGCTaGGATGCTGCTGGGCCCTGT +
Preference number: 2 (lower is better)
Translates to: GEAAVSQCGAIFFWKPLSLWVGG*DAAGPC
Trigger: ACAGGGCCCAGCAGCATCTCAGCCTCCTACCCACAA...GGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR-3UTR GCA 90 bp AGGTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTGGATGGTCTACCCATaGAGAAATCAGTGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: RLMEGSLGPRHTTACALLWMVYP*RNQWPG
Trigger: TCCTGGCCACTGATTTCTGCATGGGTAGACCATCCA...GAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR GCA 90 bp CTAGCAGGTAAGAAGCCAGATGATCGAAGCAACCGGCCAGTAAGGGAGGCCTGGCCACCTTCTACCCGCTaGAGTCTTGGATGGTCTACC +
Preference number: 2 (lower is better)
Translates to: LAGKKPDDRSNRPVREAWPPSTR*SLGWST
Trigger: GGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGG...CCAGGCCTCCCTTACTGGCCGGTTGCTTCGATCATCTGGCTTCTTACCTGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR-3UTR GCA 90 bp AAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTGGTAGGAGGCTGAGATaGTGCTGGGCCCTGTCCCCA +
Preference number: 2 (lower is better)
Translates to: KDSHEELPPSTRCSLGWSGRRLR*CWALSP
Trigger: TGGGGACAGGGCCCAGCAGCATCTCAGCCTCCTACC...AGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR-3UTR GCA 90 bp TCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTGCTGGGATATCGCCTCAAGCAAGAGGTaGCACAGTGGCAGCAGCACA +
Preference number: 2 (lower is better)
Translates to: STHAEISGQEGRAYCWDIASSKR*HSGSST
Trigger: TGTGCTGCTGCCACTGTGGCACCTCTTGCTTGAGGC...GATATCCCAGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
3UTR-3UTR CCA 90 bp AGGTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCCGCTGCAGTCTTGGATaGTCTACCCATGCAGAAATC +
Preference number: 2 (lower is better)
Translates to: RLMEGSLGPRHTTACALLRCSLG*STHAEI
Trigger: GATTTCTGCATGGGTAGACCATCCAAGACTGCAGCG...GAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR CCA 90 bp GCTGTGGCTAGAGCTGTGACCAAGAATGGGAACAGGAGGCTGCTAAAGTCTGGACACAAGGATGGAGGCTaGGGGCCATGTGCAGTAGGG +
Preference number: 2 (lower is better)
Translates to: AVARAVTKNGNRRLLKSGHKDGG*GPCAVG
Trigger: CCCTACTGCACATGGCCCCCAGCCTCCATCCTTGTG...TCCAGACTTTAGCAGCCTCCTGTTCCCATTCTTGGTCACAGCTCTAGCCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR-3UTR TCA 90 bp AGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTAGTCCTGTCTCAGGTTaGTGGAGGGTTCCCTGGGCC +
Preference number: 2 (lower is better)
Translates to: REAEPCDQDPQHDGEWKVSPVSG*WRVPWA
Trigger: GGCCCAGGGAACCCTCCATCAACCTGAGACAGGACT...AACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR GCA 90 bp CTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGCCACCTTCTACCCGCTaGAGTCTTGGATGGTCTACC +
Preference number: 2 (lower is better)
Translates to: LPAAVLDGLPMQKSVARKPPSTR*SLGWST
Trigger: GGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGG...CTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
3UTR-3UTR GCA 90 bp GAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGACTCCCATGAAGAACTaGCACCTTCTACCCGCTGCA +
Preference number: 2 (lower is better)
Translates to: ELRWRQLATCLGENSGTKTPMKN*HLLPAA
Trigger: TGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGT...CTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
3UTR-3UTR GCA 90 bp CTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGAGGCAACTGGCCACTTaGCTAGGAGAGAACTCAGGC +
Preference number: 2 (lower is better)
Translates to: LPAAVLDGLPMQKSVARKRQLAT*LGENSG
Trigger: GCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCT...CTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
3UTR-3UTR GCA 90 bp CATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGTAGGAGGCTGAGATaGTGCTGGGCCCTGTCCCCA +
Preference number: 2 (lower is better)
Translates to: HTQEPYTESCLRLMEGSLGRRLR*CWALSP
Trigger: TGGGGACAGGGCCCAGCAGCATCTCAGCCTCCTACC...CAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTGGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR-3UTR GCA 90 bp GATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGGCTGCTGTTTCCCAATaGGGTGCTATATTCTTCTGG +
Preference number: 2 (lower is better)
Translates to: DGGFPGPKAHNCLCSALQAAVSQ*GAIFFW
Trigger: CCAGAAGAATATAGCACCGCATTGGGAAACAGCAGC...CTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR GCA 90 bp TCCAAGAAAGCCACTGTAATGTCCTGTAGGCAAAGCCAGGTCCAGTGGACAGCCCACCTCACCTCTGCATaGCTCATGGCAGTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: SKKATVMSCRQSQVQWTAHLTSA*LMAVLL
Trigger: CAGGAGCACTGCCATGAGGCATGCAGAGGTGAGGTG...GGCTGTCCACTGGACCTGGCTTTGCCTACAGGACATTACAGTGGCTTTCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
3UTR-3UTR CCA 90 bp CAGGTCCAGTGGACAGCCTCACTGAGCTGTGTCTTCATGCAGTCCCAGGTCACCCGCTGCAGTCTTGGATaGTCTACCCATGCAGAAATC +
Preference number: 2 (lower is better)
Translates to: QVQWTASLSCVFMQSQVTRCSLG*STHAEI
Trigger: GATTTCTGCATGGGTAGACCATCCAAGACTGCAGCG...GGTGACCTGGGACTGCATGAAGACACAGCTCAGTGAGGCTGTCCACTGGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
3UTR-3UTR CCA 90 bp GAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGATGGAAGAACTGAGGTaGAGGCAACTGGCCACTTGC +
Preference number: 2 (lower is better)
Translates to: ELRWRQLATCLGENSGTKMEELR*RQLATC
Trigger: GCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCAT...CTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
3UTR-3UTR CCA 90 bp GATATCAGGGCAAGTGCCCAGTCCAAGAAAGCCACTGTAATGTCCTGTAGGCAACCTCTGCATGCCTCATaGCAGTGCTCCTGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: DIRASAQSKKATVMSCRQPLHAS*QCSWAQ
Trigger: CTGGGCCCAGGAGCACTGCCATGAGGCATGCAGAGG...TTGCCTACAGGACATTACAGTGGCTTTCTTGGACTGGGCACTTGCCCTGATATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
3UTR-3UTR CCA 90 bp CTAGCAGGTAAGAAGCCAGATGATCGAAGCAACCGGCCAGTAAGGGAGGCCTGGTTCCTCAGCAGCTCCTaGTTGGTAAGCTTGAGGGAC +
Preference number: 2 (lower is better)
Translates to: LAGKKPDDRSNRPVREAWFLSSS*LVSLRD
Trigger: GTCCCTCAAGCTTACCAACCAGGAGCTGCTGAGGAA...CCAGGCCTCCCTTACTGGCCGGTTGCTTCGATCATCTGGCTTCTTACCTGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR-3UTR TCA 90 bp TGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGCCAAGACCCCCAGCATaGTGGGGAATGGAAAGTTGG +
Preference number: 2 (lower is better)
Translates to: CHLLPAAVLDGLPMQKSVPRPPA*WGMESW
Trigger: CCAACTTTCCATTCCCCATCATGCTGGGGGTCTTGG...CACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR GCA 90 bp CAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCACCACCTTCTACCCGCTaGAGTCTTGGATGGTCTACC +
Preference number: 2 (lower is better)
Translates to: QEPYTESCLRLMEGSLGPPPSTR*SLGWST
Trigger: GGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGG...TGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR GCA 90 bp TTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGATGATAGGAACTCCCATGAAGAACTaGCACCTTCTACCCGCTGCA +
Preference number: 2 (lower is better)
Translates to: FPGPKAHNCLCSALQMIGTPMKN*HLLPAA
Trigger: TGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGT...TCCTATCATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR GCA 90 bp ACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGAGGCAACTGGCCACTTaGCTAGGAGAGAACTCAGGC +
Preference number: 2 (lower is better)
Translates to: TATFYPLQSWMVYPCRNQRQLAT*LGENSG
Trigger: GCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCT...CTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
3UTR-3UTR GCA 90 bp GGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTGCTGGGATACAACTGCCTGTGCTCTaGTCTACAGATGATAGGAGG +
Preference number: 2 (lower is better)
Translates to: GLPMQKSVARKAGPTAGIQLPVL*STDDRR
Trigger: CCTCCTATCATCTGTAGAGCAGAGCACAGGCAGTTG...TATCCCAGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR-3UTR GCA 90 bp TCCAAGAAAGCCACTGTAATGTCCTGTAGGCAAAGCCAGGTCCAGTGGACAGCCAGGTCACCTCACCTCTaGATGCCTCATGGCAGTGCT +
Preference number: 2 (lower is better)
Translates to: SKKATVMSCRQSQVQWTARSPHL*MPHGSA
Trigger: AGCACTGCCATGAGGCATGCAGAGGTGAGGTGACCT...GGCTGTCCACTGGACCTGGCTTTGCCTACAGGACATTACAGTGGCTTTCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
3UTR-3UTR GCA 90 bp AAAGCCACTGTAATGTCCTGTAGGCAAAGCCAGGTCCAGTGGACAGCCTCACTGAGGTCACCTCACCTCTaGATGCCTCATGGCAGTGCT +
Preference number: 2 (lower is better)
Translates to: KATVMSCRQSQVQWTASLRSPHL*MPHGSA
Trigger: AGCACTGCCATGAGGCATGCAGAGGTGAGGTGACCT...CAGTGAGGCTGTCCACTGGACCTGGCTTTGCCTACAGGACATTACAGTGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
3UTR-3UTR GCA 90 bp CCACCAAAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGGGATATCAGGGCAAGTaGCCAGTCCAAGAAAGCCAC +
Preference number: 2 (lower is better)
Translates to: PPKMEELRWRQLATCLGEGYQGK*PVQESH
Trigger: GTGGCTTTCTTGGACTGGGCACTTGCCCTGATATCC...CTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434544.1
3UTR-3UTR CCA 90 bp GTGGAGGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTACCCGCTGCAGTCTTaGATGGTCTACCCATGCAGA +
Preference number: 2 (lower is better)
Translates to: VEVRLLFPNAVLYSSGSPYPLQS*MVYPCR
Trigger: TCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTA...GGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR CCA 90 bp CCACCAAAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGTACCCGCTGCAGTCTTaGATGGTCTACCCATGCAGA +
Preference number: 2 (lower is better)
Translates to: PPKMEELRWRQLATCLGEYPLQS*MVYPCR
Trigger: TCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTA...CTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
3UTR-3UTR CCA 90 bp GTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTAGGTGCTATATTCTTCTaGAAGCCCCTTTCCTTCTGC +
Preference number: 2 (lower is better)
Translates to: VDGGFPGPKAHNCLCSALGAIFF*KPLSFC
Trigger: GCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACC...TAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR CCA 90 bp AGGTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCCAGCATGATGGGGAATaGAAAGTTGGAAGAAGTAGG +
Preference number: 2 (lower is better)
Translates to: RLMEGSLGPRHTTACALLQHDGE*KVGRSR
Trigger: CCTACTTCTTCCAACTTTCCATTCCCCATCATGCTG...GAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR CAA 90 bp AAAAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTaGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: KKTPMKNCHLLPAAV*DGLPMQKSVARKAG
Trigger: CCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
3UTR-3UTR TCA 90 bp ACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGCAAAGATGGAAGAACTaGGGTGGAGGCAACTGGCCA +
Preference number: 2 (lower is better)
Translates to: TATFYPLQSWMVYPCRNQQRWKN*GGGNWP
Trigger: TGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTG...CTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
3UTR-3UTR TCA 90 bp GGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCCTGTGGCTAGAGCTGTaGCCAAGAATGGGAACAGGA +
Preference number: 2 (lower is better)
Translates to: GEAAVSQCGAIFFWKPLSLWLEL*PRMGTG
Trigger: TCCTGTTCCCATTCTTGGTCACAGCTCTAGCCACAG...GGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR TCA 90 bp ATGGGGAATGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACAGGGAGGGCTGTGGCTAGAGCTGTaGCCAAGAATGGGAACAGGA +
Preference number: 2 (lower is better)
Translates to: MGNGKLEEVGLQGRGQGGLWLEL*PRMGTG
Trigger: TCCTGTTCCCATTCTTGGTCACAGCTCTAGCCACAG...CCCTCCCTGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR TCA 90 bp AAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTGGGCAGAAAGGAAGCTaGCTGTGGCATTGGTGTGAG +
Preference number: 2 (lower is better)
Translates to: KDSHEELPPSTRCSLGWSGQKGS*LWHWCE
Trigger: CTCACACCAATGCCACAGTCAGCTTCCTTTCTGCCC...AGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR-3UTR GCA 90 bp TTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTGCTTGGATGGTCTACCCATaGAGAAATCAGTGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: LDGLPMQKSVARKAGPTAWMVYP*RNQWPG
Trigger: TCCTGGCCACTGATTTCTGCATGGGTAGACCATCCA...AGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
3UTR-3UTR GCA 90 bp GCTGTAGCCTTGCAGACTGTAGGAGTAGAGCTTGGCACACGCTTGTTGGCTAGCTGGATGGTCTACCCATaGAGAAATCAGTGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: AVALQTVGVELGTRLLASWMVYP*RNQWPG
Trigger: TCCTGGCCACTGATTTCTGCATGGGTAGACCATCCA...GCTAGCCAACAAGCGTGTGCCAAGCTCTACTCCTACAGTCTGCAAGGCTACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR-3UTR GCA 90 bp AAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAACCACCTTCTACCCGCTaGAGTCTTGGATGGTCTACC +
Preference number: 2 (lower is better)
Translates to: KNCHLLPAAVLDGLPMQKPPSTR*SLGWST
Trigger: GGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGG...TTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
3UTR-3UTR GCA 90 bp TGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACAGGGAGGGGCTTAGAGACTCCCATGAAGAACTaGCACCTTCTACCCGCTGCA +
Preference number: 2 (lower is better)
Translates to: WKVGRSRTTREGTGRGLETPMKN*HLLPAA
Trigger: TGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGT...CTCTAAGCCCCTCCCTGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR GCA 90 bp CTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGCAACTGCCTGTGCTCTaGTCTACAGATGATAGGAGG +
Preference number: 2 (lower is better)
Translates to: LPAAVLDGLPMQKSVARKQLPVL*STDDRR
Trigger: CCTCCTATCATCTGTAGAGCAGAGCACAGGCAGTTG...CTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR GCA 90 bp AGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTCAGGAGCTGAGCAAGTaGTCCAGCAGAAGGCTGGAC +
Preference number: 2 (lower is better)
Translates to: RLLFPNAVLYSSGSPFPSQELSK*SSRRLD
Trigger: GTCCAGCCTTCTGCTGGAGCACTTGCTCAGCTCCTG...AGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR-3UTR CCA 90 bp TACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCGCTGCAGTCTTGGATaGTCTACCCATGCAGAAATC +
Preference number: 2 (lower is better)
Translates to: YPLQSWMVYPCRNQWPGRRCSLG*STHAEI
Trigger: GATTTCTGCATGGGTAGACCATCCAAGACTGCAGCG...CCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
3UTR-3UTR CCA 90 bp GTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTGCTGGGATATCGCTGCAGTCTTGGATaGTCTACCCATGCAGAAATC +
Preference number: 2 (lower is better)
Translates to: VYPCRNQWPGRQGLLLGYRCSLG*STHAEI
Trigger: GATTTCTGCATGGGTAGACCATCCAAGACTGCAGCG...ATATCCCAGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
3UTR-3UTR CCA 90 bp GAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCACAGAAGCCACCTGCTaGGAGTTCTATCTTTTTAGA +
Preference number: 2 (lower is better)
Translates to: ESCLRLMEGSLGPRHTTATEATC*EFYLFR
Trigger: TCTAAAAAGATAGAACTCCCAGCAGGTGGCTTCTGT...GGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR-3UTR CCA 90 bp AGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTGGGCTTAGAGGCATTTaGGGCAGGCTGGGCATTTTG +
Preference number: 2 (lower is better)
Translates to: REAEPCDQDPQHDGEWKVGLRGI*GRLGIL
Trigger: CAAAATGCCCAGCCTGCCCCAAATGCCTCTAAGCCC...AACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR CCA 90 bp AGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGTTAAAACAAGAGGTGCCACAGTaGCAGCAGCACATTCTGGTG +
Preference number: 2 (lower is better)
Translates to: RWRQLATCLGENSGTKLKQEVPQ*QQHILV
Trigger: CACCAGAATGTGCTGCTGCCACTGTGGCACCTCTTG...TTTTAACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434544.1
3UTR-3UTR CCA 90 bp GGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCAAAGCCAGGTCCAGTaGACAGCCTCACTGAGCTGT +
Preference number: 2 (lower is better)
Translates to: GCCFPMRCYILLEAPFLLQSQVQ*TASLSC
Trigger: ACAGCTCAGTGAGGCTGTCCACTGGACCTGGCTTTG...CAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR CAA 90 bp GTCCCCACCAAAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTaGCCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATG +
Preference number: 2 (lower is better)
Translates to: VPTKDGRTEVEATGH*PRRELRHQVKKTPM
Trigger: CATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTGGTGGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR-3UTR TCA 90 bp GTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTATTAAAAAGACTCCCATaGAGAACTGCCACCTTCTAC +
Preference number: 2 (lower is better)
Translates to: VDGGFPGPKAHNCLCSALLKRLP*RTATFY
Trigger: GTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAA...TAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR TCA 90 bp GGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTGCTGGTTAAAAAGACTCCCATaGAGAACTGCCACCTTCTAC +
Preference number: 2 (lower is better)
Translates to: GWSTHAEISGQEGRAYCWLKRLP*RTATFY
Trigger: GTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAA...CCAGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
3UTR-3UTR TCA 90 bp GGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTGGCTAGAGCTGTaGCCAAGAATGGGAACAGGA +
Preference number: 2 (lower is better)
Translates to: GCCFPMRCYILLEAPFLLLWLEL*PRMGTG
Trigger: TCCTGTTCCCATTCTTGGTCACAGCTCTAGCCACAG...CAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR TCA 90 bp GAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTGGAGCAGGCTGGGCATTTTaGAGTGAGAGGCATTTCCAT +
Preference number: 2 (lower is better)
Translates to: EAEPCDQDPQHDGEWKVGAGWAF*SERHFH
Trigger: ATGGAAATGCCTCTCACTTCAAAATGCCCAGCCTGC...TCCAACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR CCA 90 bp TGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACAGGGAGGGGCTTAGAGCGCTGCAGTCTTGGATaGTCTACCCATGCAGAAATC +
Preference number: 2 (lower is better)
Translates to: WKVGRSRTTREGTGRGLERCSLG*STHAEI
Trigger: GATTTCTGCATGGGTAGACCATCCAAGACTGCAGCG...CTCTAAGCCCCTCCCTGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR CCA 90 bp GCTGTGACCAAGAATGGGAACAGGAGGCTGCTAAAGTCTGGAGAAGCAGGAATCTACCCGCTGCAGTCTTaGATGGTCTACCCATGCAGA +
Preference number: 2 (lower is better)
Translates to: AVTKNGNRRLLKSGEAGIYPLQS*MVYPCR
Trigger: TCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTA...GATTCCTGCTTCTCCAGACTTTAGCAGCCTCCTGTTCCCATTCTTGGTCACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR-3UTR CCA 90 bp GTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTGCTGGGATATGAATGTGCTGTCTCTTaGGATCCATCTTCTGAGGGT +
Preference number: 2 (lower is better)
Translates to: VYPCRNQWPGRQGLLLGYECAVS*DPSSEG
Trigger: ACCCTCAGAAGATGGATCCCAAGAGACAGCACATTC...ATATCCCAGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR-3UTR TCA 90 bp TTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGATGATAGGACCAAGAACCATATACTaGGTCCTGTCTCAGGTTGAT +
Preference number: 2 (lower is better)
Translates to: FPGPKAHNCLCSALQMIGPRTIY*VLSQVD
Trigger: ATCAACCTGAGACAGGACTCAGTATATGGTTCTTGG...TCCTATCATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR TCA 90 bp CTGCTAAAGTCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGCTGGAAGGAGCTGTGTaGCCGGAGGTCATGGCACAG +
Preference number: 2 (lower is better)
Translates to: LLKSRRELRHQVKKTPMKLEGAV*PEVMAQ
Trigger: CTGTGCCATGACCTCCGGTCACACAGCTCCTTCCAG...CTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGACTTTAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR-3UTR GCA 90 bp AACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCATGGATGGTCTACCCATaGAGAAATCAGTGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: NCHLLPAAVLDGLPMQKSWMVYP*RNQWPG
Trigger: TCCTGGCCACTGATTTCTGCATGGGTAGACCATCCA...TGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
3UTR-3UTR GCA 90 bp AAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCATGGATGGTCTACCCATaGAGAAATCAGTGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: KMEELRWRQLATCLGENSWMVYP*RNQWPG
Trigger: TCCTGGCCACTGATTTCTGCATGGGTAGACCATCCA...TGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
3UTR-3UTR GCA 90 bp CTGGTAGGGCATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGACTCCCATGAAGAACTaGCACCTTCTACCCGCTGCA +
Preference number: 2 (lower is better)
Translates to: LVGHTQEPYTESCLRLMETPMKN*HLLPAA
Trigger: TGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGT...CTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTGGGTATGCCCTACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR GCA 90 bp ATGGGGAATGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACAGGGAGGGGCACACAACTGCCTGTaGTCTGCTCTACAGATGATA +
Preference number: 2 (lower is better)
Translates to: MGNGKLEEVGLQGRGQGGAHNCL*SALQMI
Trigger: TATCATCTGTAGAGCAGAGCACAGGCAGTTGTGTGC...CCCTCCCTGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR CCA 90 bp CCTCAGCAGCTCCTGGTTGGTAAGCTTGAGGGACTGAATGGTTTCTTGCAAAGATACCCGCTGCAGTCTTaGATGGTCTACCCATGCAGA +
Preference number: 2 (lower is better)
Translates to: PQQLLVGKLEGLNGFLQRYPLQS*MVYPCR
Trigger: TCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTA...TCTTTGCAAGAAACCATTCAGTCCCTCAAGCTTACCAACCAGGAGCTGCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR-3UTR GCA 90 bp CTGGTAGGGCATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGCATCCTGGTTGTTACTaGTACCCTTCCTCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: LVGHTQEPYTESCLRLMEHPGCY*YPSSAA
Trigger: AGCTGCTGAGGAAGGGTAGCAGTAACAACCAGGATG...CTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTGGGTATGCCCTACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR-3UTR CCA 90 bp TCAAATCTGTGTCCTTTATTCCACCTGGTAGGGCATACCCAAGAACCATATACTAGGCTGAGATGCTGCTaGGCCCTGTCCCCACCAAAG +
Preference number: 2 (lower is better)
Translates to: SNLCPLFHLVGHTQEPYTRLRCC*ALSPPK
Trigger: CTTTGGTGGGGACAGGGCCCAGCAGCATCTCAGCCT...AGTATATGGTTCTTGGGTATGCCCTACCAGGTGGAATAAAGGACACAGATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR-3UTR CCA 90 bp GAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCAAGGGGTTTAGAAATGAGATaGAAGGAAGTGGAAGGCAGA +
Preference number: 2 (lower is better)
Translates to: EPYTESCLRLMEGSLGPRGLEMR*KEVEGR
Trigger: TCTGCCTTCCACTTCCTTCCATCTCATTTCTAAACC...CCTTGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR CAA 90 bp CAGAAGCCACCTGCTGGGAGTTCTATCTTTTTAGAGATGAGCTGTTaGGGGTTTAGAAATGAGATGGAAGGAAGTGGAAGGCAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: QKPPAGSSIFLEMSC*GFRNEMEGSGRQRA
Trigger: TGCCCTCTGCCTTCCACTTCCTTCCATCTCATTTCTAAACCCCAAACAGCTCATCTCTAAAAAGATAGAACTCCCAGCAGGTGGCTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR-3UTR GCA 90 bp AAGTCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCGGATATCAGGGCAAGTaGCCAGTCCAAGAAAGCCAC +
Preference number: 2 (lower is better)
Translates to: KSRRELRHQVKKTPMKNCGYQGK*PVQESH
Trigger: GTGGCTTTCTTGGACTGGGCACTTGCCCTGATATCC...GCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR CAA 90 bp GAATGGGAACAGGAGGCTGCTAAAGTCTGGAGAAGCAGGAATCATTaGTCAGAAGAACACAGAAGCCACCTGCTGGGAGTTCTATCTTTT +
Preference number: 2 (lower is better)
Translates to: EWEQEAAKVWRSRNH*SEEHRSHLLGVLSF
Trigger: AAAAGATAGAACTCCCAGCAGGTGGCTTCTGTGTTCTTCTGACAAATGATTCCTGCTTCTCCAGACTTTAGCAGCCTCCTGTTCCCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR-3UTR TCA 90 bp GCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTTTAAAAAGACTCCCATaGAGAACTGCCACCTTCTAC +
Preference number: 2 (lower is better)
Translates to: AVSQCGAIFFWKPLSFCCLKRLP*RTATFY
Trigger: GTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAA...ACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR TCA 90 bp AAGTCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCGCAGGCTGGGCATTTTaGAGTGAGAGGCATTTCCAT +
Preference number: 2 (lower is better)
Translates to: KSRRELRHQVKKTPMKNCAGWAF*SERHFH
Trigger: ATGGAAATGCCTCTCACTTCAAAATGCCCAGCCTGC...GCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321326.11
ENST00000435172.6
3UTR-3UTR CCA 90 bp TTATTCCACCTGGTAGGGCATACCCAAGAACCATATACTGAGTCCTGTCTCAGGGGTTTAGAAATGAGATaGAAGGAAGTGGAAGGCAGA +
Preference number: 2 (lower is better)
Translates to: LFHLVGHTQEPYTESCLRGLEMR*KEVEGR
Trigger: TCTGCCTTCCACTTCCTTCCATCTCATTTCTAAACC...CCTGAGACAGGACTCAGTATATGGTTCTTGGGTATGCCCTACCAGGTGGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR-3UTR TCA 90 bp CTGCTAAAGTCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGGTAAGCTTGAGGGACTaGATGGTTTCTTGCAAAGAC +
Preference number: 2 (lower is better)
Translates to: LLKSRRELRHQVKKTPMKVSLRD*MVSCKD
Trigger: GTCTTTGCAAGAAACCATTCAGTCCCTCAAGCTTAC...CTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGACTTTAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR-3UTR TCA 90 bp TCAAATCTGTGTCCTTTATTCCACCTGGTAGGGCATACCCAAGAACCATATACTTTAAAAAGACTCCCATaGAGAACTGCCACCTTCTAC +
Preference number: 2 (lower is better)
Translates to: SNLCPLFHLVGHTQEPYTLKRLP*RTATFY
Trigger: GTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAA...AGTATATGGTTCTTGGGTATGCCCTACCAGGTGGAATAAAGGACACAGATTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
3UTR TCA 72 bp GAGCCCAGGCCAGCTGCAAGCTGGGCCGCACCACGGTaGGCAGGTGGGAGCCCCAGAGCGGCAGTGTCTCCC +
Preference number: 3 (lower is better)
Translates to: EPRPAASWAAPR*AGGSPRAAVSP
Trigger: GGGAGACACTGCCGCTCTGGGGCTCCCACCTGCTCACCGTGGTGCGGCCCAGCTTGCAGCTGGCCTGGGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR CCA 72 bp GCCAGCTGCAAGCTGGGCCGCACCACGGTGAGCAGGTaGGAGCCCCAGAGCGGCAGTGTCTCCCCCAGCCAG +
Preference number: 3 (lower is better)
Translates to: ASCKLGRTTVSR*EPQSGSVSPSQ
Trigger: CTGGCTGGGGGAGACACTGCCGCTCTGGGGCTCCCACCTGCTCACCGTGGTGCGGCCCAGCTTGCAGCTGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR TCA 72 bp AACAGGAGGAGCCGCGTCCAGGGCAGCCGAGGACCCTaGACCTGCTGCAACAGGCCCTTGCAGGCCATGTCA +
Preference number: 3 (lower is better)
Translates to: NRRSRVQGSRGP*TCCNRPLQAMS
Trigger: TGACATGGCCTGCAAGGGCCTGTTGCAGCAGGTTCAGGGTCCTCGGCTGCCCTGGACGCGGCTCCTCCTGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR-3UTR CAA 90 bp AGGTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTGCTGCAACAGGCCCTaGCAGGCCATGTCACAGGTG +
Preference number: 3 (lower is better)
Translates to: RLMEGSLGPRHTTACALLCCNRP*QAMSQV
Trigger: CACCTGTGACATGGCCTGCAAGGGCCTGTTGCAGCA...GAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR CCA 72 bp AGGGAGGCCTGGAAGGAGCTGTGTGACCGGAGGTCATaGCACAGGAAGCCTACAGCGAAGACCAGCAGCAAC +
Preference number: 3 (lower is better)
Translates to: REAWKELCDRRS*HRKPTAKTSSN
Trigger: GTTGCTGCTGGTCTTCGCTGTAGGCTTCCTGTGCCATGACCTCCGGTCACACAGCTCCTTCCAGGCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR GCA 72 bp AGCAAGTGCTCCAGCAGAAGGCTGGACTGTGACAGGTaGTTAGGGTACAGCTGCCTCCAGACGCTGGCACTG +
Preference number: 3 (lower is better)
Translates to: SKCSSRRLDCDR*LGYSCLQTLAL
Trigger: CAGTGCCAGCGTCTGGAGGCAGCTGTACCCTAAGCACCTGTCACAGTCCAGCCTTCTGCTGGAGCACTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR-3UTR CAA 90 bp AAGGAAGTGGAAGGCAGAGGGCAAGGGCGGAGTTGTGAGAGGCTACCAGCACAACTACCCGCTGCAGTCTaGGATGGTCTACCCATGCAG +
Preference number: 3 (lower is better)
Translates to: KEVEGRGQGRSCERLPAQLPAAV*DGLPMQ
Trigger: CTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAG...TTGTGCTGGTAGCCTCTCACAACTCCGCCCTTGCCCTCTGCCTTCCACTTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR-3UTR CAA 90 bp GGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACGAGGCAACTGGCCACTaGCCTAGGAGAGAACTCAGG +
Preference number: 3 (lower is better)
Translates to: GRTEVEATGHLPRRELRHEATGH*PRRELR
Trigger: CCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTC...GTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
3UTR TCA 72 bp CCTGTAGGCAAAGCCAGGTCCAGTGGACAGCCTCACTaGGCTGTGTCTTCATGCAGTCCCAGGTCACCTCAC +
Preference number: 3 (lower is better)
Translates to: PVGKARSSGQPH*AVSSCSPRSPH
Trigger: GTGAGGTGACCTGGGACTGCATGAAGACACAGCTCAGTGAGGCTGTCCACTGGACCTGGCTTTGCCTACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
3UTR GCA 72 bp GGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTaGTCTGCTCTACAGATGATAGGAGGGATGGACAGT +
Preference number: 3 (lower is better)
Translates to: GGFPGPKAHNCL*SALQMIGGMDS
Trigger: ACTGTCCATCCCTCCTATCATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR CCA 72 bp GCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTGCTaGGATATCAGGGCAAGTGCCCAGTCCAAGAAAGCC +
Preference number: 3 (lower is better)
Translates to: AEISGQEGRAYC*DIRASAQSKKA
Trigger: GGCTTTCTTGGACTGGGCACTTGCCCTGATATCCCAGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
3UTR-3UTR CAA 90 bp TACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCTACCCGCTGCAGTCTaGGATGGTCTACCCATGCAG +
Preference number: 3 (lower is better)
Translates to: YPLQSWMVYPCRNQWPGRLPAAV*DGLPMQ
Trigger: CTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAG...CCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
3UTR-3UTR CAA 90 bp GCTGTAGCCTTGCAGACTGTAGGAGTAGAGCTTGGCACACGCTTGTTGGCTAGCCTACCCGCTGCAGTCTaGGATGGTCTACCCATGCAG +
Preference number: 3 (lower is better)
Translates to: AVALQTVGVELGTRLLASLPAAV*DGLPMQ
Trigger: CTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAG...GCTAGCCAACAAGCGTGTGCCAAGCTCTACTCCTACAGTCTGCAAGGCTACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR-3UTR CAA 90 bp GGCTGGGGGCCATGTGCAGTAGGGCCAGAAAAGTGTTCAGTGGAATTGTGGGTAGAGGCAACTGGCCACTaGCCTAGGAGAGAACTCAGG +
Preference number: 3 (lower is better)
Translates to: GWGPCAVGPEKCSVELWVEATGH*PRRELR
Trigger: CCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTC...TACCCACAATTCCACTGAACACTTTTCTGGCCCTACTGCACATGGCCCCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR TCA 72 bp CCTGCTGCAACAGGCCCTTGCAGGCCATGTCACAGGTaGCGACATCCTGGTTGTTACTGCTACCCTTCCTCA +
Preference number: 3 (lower is better)
Translates to: PAATGPCRPCHR*RHPGCYCYPSS
Trigger: TGAGGAAGGGTAGCAGTAACAACCAGGATGTCGTCACCTGTGACATGGCCTGCAAGGGCCTGTTGCAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR GCA 72 bp GTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTaGTCTACAGATGATAGGAGGGATGGACAGTGGAGA +
Preference number: 3 (lower is better)
Translates to: VPWAQGTQLPVL*STDDRRDGQWR
Trigger: TCTCCACTGTCCATCCCTCCTATCATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR GCA 72 bp GTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTaGCTGTGCTCTGCTCTACAGATGATAGGAGGGATG +
Preference number: 3 (lower is better)
Translates to: VDGGFPGPKAHN*LCSALQMIGGM
Trigger: CATCCCTCCTATCATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR GCA 72 bp ACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATaGAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTG +
Preference number: 3 (lower is better)
Translates to: TFYPLQSWMVYP*RNQWPGRQGLL
Trigger: CAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
3UTR-3UTR CAA 90 bp ACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGCTACCCGCTGCAGTCTaGGATGGTCTACCCATGCAG +
Preference number: 3 (lower is better)
Translates to: TATFYPLQSWMVYPCRNQLPAAV*DGLPMQ
Trigger: CTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAG...CTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
3UTR TCA 72 bp CCAGAAAAGTGTTCAGTGGAATTGTGGGTAGGAGGCTaGGATGCTGCTGGGCCCTGTCCCCACCAAAGATGG +
Preference number: 3 (lower is better)
Translates to: PEKCSVELWVGG*DAAGPCPHQRW
Trigger: CCATCTTTGGTGGGGACAGGGCCCAGCAGCATCTCAGCCTCCTACCCACAATTCCACTGAACACTTTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR GCA 72 bp CATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTaGTGGGATATCAGGGCAAGTGCCCAGTCCAAGAAA +
Preference number: 3 (lower is better)
Translates to: HAEISGQEGRAY*WDIRASAQSKK
Trigger: TTTCTTGGACTGGGCACTTGCCCTGATATCCCAGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
3UTR GCA 72 bp ACCTTCTTGGGAATCTGCTCCCAGGAGCTGAGCAAGTaGTCCAGCAGAAGGCTGGACTGTGACAGGTGCTTA +
Preference number: 3 (lower is better)
Translates to: TFLGICSQELSK*SSRRLDCDRCL
Trigger: TAAGCACCTGTCACAGTCCAGCCTTCTGCTGGAGCACTTGCTCAGCTCCTGGGAGCAGATTCCCAAGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR CCA 72 bp GCCACTGTAATGTCCTGTAGGCAAAGCCAGGTCCAGTaGACAGCCTCACTGAGCTGTGTCTTCATGCAGTCC +
Preference number: 3 (lower is better)
Translates to: ATVMSCRQSQVQ*TASLSCVFMQS
Trigger: GGACTGCATGAAGACACAGCTCAGTGAGGCTGTCCACTGGACCTGGCTTTGCCTACAGGACATTACAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
3UTR CCA 72 bp CTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTaGCCAGGAAGGCAGGGCCTACTGCTGGGATATCAG +
Preference number: 3 (lower is better)
Translates to: LQSWMVYPCRNQ*PGRQGLLLGYQ
Trigger: CTGATATCCCAGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
3UTR CCA 72 bp CAGTCAGGCTGCTCAGGAGCTGAATGTGCTGTCTCTTaGGATCCATCTTCTGAGGGTGAAGCTCGAGTGAGC +
Preference number: 3 (lower is better)
Translates to: QSGCSGAECAVS*DPSSEGEARVS
Trigger: GCTCACTCGAGCTTCACCCTCAGAAGATGGATCCCAAGAGACAGCACATTCAGCTCCTGAGCAGCCTGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR-3UTR CAA 90 bp GCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCCTACCCGCTGCAGTCTaGGATGGTCTACCCATGCAG +
Preference number: 3 (lower is better)
Translates to: ATGHLPRRELRHQVKKTPLPAAV*DGLPMQ
Trigger: CTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAG...GGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
3UTR CCA 72 bp GAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATaGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGG +
Preference number: 3 (lower is better)
Translates to: EPCDQDPQHDGE*KVGRSRTTREG
Trigger: CCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR CAA 90 bp CTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTGGAGGCAACTGGCCACTaGCCTAGGAGAGAACTCAGG +
Preference number: 3 (lower is better)
Translates to: LFPNAVLYSSGSPFPSAVEATGH*PRRELR
Trigger: CCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTC...CACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR TCA 72 bp ATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTaGTGGAGGGTTCCCTGGGCCCAAGGCACACAACTG +
Preference number: 3 (lower is better)
Translates to: IPKNHILSPVSG*WRVPWAQGTQL
Trigger: CAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTGGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR-3UTR CAA 90 bp GTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTAATGGGGAATGGAAAGTaGGAAGAAGTAGGACTACAA +
Preference number: 3 (lower is better)
Translates to: VDGGFPGPKAHNCLCSALMGNGK*EEVGLQ
Trigger: TTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCAT...TAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR GCA 72 bp AAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTaGAGTCTTGGATGGTCTACCCATGCAGAAATCAGT +
Preference number: 3 (lower is better)
Translates to: KDSHEELPPSTR*SLGWSTHAEIS
Trigger: ACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
3UTR GCA 72 bp CTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTaGCACCTTCTACCCGCTGCAGTCTTGGATGGTCTA +
Preference number: 3 (lower is better)
Translates to: LRHQVKKTPMKN*HLLPAAVLDGL
Trigger: TAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
3UTR-3UTR CAA 90 bp ATGGGGAATGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACAGGGAGGGAGAAGCAGGAATCATTaGTCAGAAGAACACAGAAGC +
Preference number: 3 (lower is better)
Translates to: MGNGKLEEVGLQGRGQGGRSRNH*SEEHRS
Trigger: GCTTCTGTGTTCTTCTGACAAATGATTCCTGCTTCT...CCCTCCCTGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR TCA 72 bp TTCCTCAGCAGCTCCTGGTTGGTAAGCTTGAGGGACTaGATGGTTTCTTGCAAAGACTTCTGTACCTTCTTG +
Preference number: 3 (lower is better)
Translates to: FLSSSWLVSLRD*MVSCKDFCTFL
Trigger: CAAGAAGGTACAGAAGTCTTTGCAAGAAACCATTCAGTCCCTCAAGCTTACCAACCAGGAGCTGCTGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
3UTR CCA 72 bp TGTGACCAAGAATGGGAACAGGAGGCTGCTAAAGTCTaGAGAAGCAGGAATCATTTGTCAGAAGAACACAGA +
Preference number: 3 (lower is better)
Translates to: CDQEWEQEAAKV*RSRNHLSEEHR
Trigger: TCTGTGTTCTTCTGACAAATGATTCCTGCTTCTCCAGACTTTAGCAGCCTCCTGTTCCCATTCTTGGTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR GCA 72 bp GCAGGAATCATTTGTCAGAAGAACACAGAAGCCACCTaGTGGGAGTTCTATCTTTTTAGAGATGAGCTGTTT +
Preference number: 3 (lower is better)
Translates to: AGIICQKNTEAT*WEFYLFRDELF
Trigger: AAACAGCTCATCTCTAAAAAGATAGAACTCCCAGCAGGTGGCTTCTGTGTTCTTCTGACAAATGATTCCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp GACGCTGGCACTGAGGGGGTCCACCGTCAGGCACTCAGTCAGGCTGCTCAGGAGCCGTCTTGGTCGCCATaGCTCGCAGCCCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: DAGTEGVHRQALSQAAQEPSWSP*LAALPP
Trigger: AGGAGGGAGGGCTGCGAGCCATGGCGACCAAGACGG...CTCCTGAGCAGCCTGACTGAGTGCCTGACGGTGGACCCCCTCAGTGCCAGCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR TCA 90 bp CAGCTCCCCATGTCCACTGACAGCCACACCCAGGCTTCAGGTGGAGGTGAGGCTGGCAGCCGAGGACCCTaGACCTGCTGCAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: QLPMSTDSHTQASGGGEAGSRGP*TCCNRP
Trigger: GGGCCTGTTGCAGCAGGTTCAGGGTCCTCGGCTGCC...AGCCTCACCTCCACCTGAAGCCTGGGTGTGGCTGTCAGTGGACATGGGGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CCGCACCACGGTGAGCAGGTGGGAGCCCCAGAGCGGCAGTGTCTCCCCCAGCCAAAGCGGCCCTGCTTCTaGTTTTGGTTGGGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: PHHGEQVGAPERQCLPQPKRPCF*FWLGGV
Trigger: AACTCCTCCCAACCAAAACCAGAAGCAGGGCCGCTT...TGGCTGGGGGAGACACTGCCGCTCTGGGGCTCCCACCTGCTCACCGTGGTGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR TCA 90 bp GTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTAGGCAGCCGAGGACCCTaGACCTGCTGCAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: VDGGFPGPKAHNCLCSALGSRGP*TCCNRP
Trigger: GGGCCTGTTGCAGCAGGTTCAGGGTCCTCGGCTGCC...TAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CCGCACCACGGTGAGCAGGTGGGAGCCCCAGAGCGGCAGTGTCTCCCCCAGCCATTCCTTCTGCAGGTCTaGCACATCCAGAGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: PHHGEQVGAPERQCLPQPFLLQV*HIQSFQ
Trigger: CTGAAAGCTCTGGATGTGGCAGACCTGCAGAAGGAA...TGGCTGGGGGAGACACTGCCGCTCTGGGGCTCCCACCTGCTCACCGTGGTGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR CCA 90 bp GATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGACCACGGTGAGCAGGTaGGAGCCCCAGAGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: DGGFPGPKAHNCLCSALQTTVSR*EPQSGS
Trigger: ACTGCCGCTCTGGGGCTCCCACCTGCTCACCGTGGT...CTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp CCGCACCACGGTGAGCAGGTGGGAGCCCCAGAGCGGCAGTGTCTCCCCCAGCCATATTCTGCCGCTTCATaGTATTCTCAAAGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: PHHGEQVGAPERQCLPQPYSAAS*YSQSPA
Trigger: AGCGGGGCTTTGAGAATATCATGAAGCGGCAGAATA...TGGCTGGGGGAGACACTGCCGCTCTGGGGCTCCCACCTGCTCACCGTGGTGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR TCA 90 bp CTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGTGGGCCGCACCACGGTaGGCAGGTGGGAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: LPAAVLDGLPMQKSVARKWAAPR*AGGSPR
Trigger: TCTGGGGCTCCCACCTGCTCACCGTGGTGCGGCCCA...CTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR TCA 90 bp CAGCTCCCCATGTCCACTGACAGCCACACCCAGGCTTCAGGTGGAGGTGAGGCTACTGTGGCATTGGTGTaGGCCCAGGCCAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: QLPMSTDSHTQASGGGEATVALV*AQASCK
Trigger: CTTGCAGCTGGCCTGGGCTCACACCAATGCCACAGT...AGCCTCACCTCCACCTGAAGCCTGGGTGTGGCTGTCAGTGGACATGGGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CTGGGGGCCATGTGCAGTAGGGCCAGAAAAGTGTTCAGTGGAATTGTGGGTAGGCTTCCCCGAGCGCCCTaGGGTTCCTGCCGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LGAMCSRARKVFSGIVGRLPRAP*GSCRLL
Trigger: GAGGAGGCGGCAGGAACCGCAGGGCGCTCGGGGAAG...CCTACCCACAATTCCACTGAACACTTTTCTGGCCCTACTGCACATGGCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp GTGGAGGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCCTTCCCCGAGCGCCCTaGGGTTCCTGCCGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: VEVRLLFPNAVLYSSGSPLPRAP*GSCRLL
Trigger: GAGGAGGCGGCAGGAACCGCAGGGCGCTCGGGGAAG...GGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACCTCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp TTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGATGATAGGACTTCCCCGAGCGCCCTaGGGTTCCTGCCGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: FPGPKAHNCLCSALQMIGLPRAP*GSCRLL
Trigger: GAGGAGGCGGCAGGAACCGCAGGGCGCTCGGGGAAG...TCCTATCATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACATGCCTCATGGCAGTaGTCCTGGGCCCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VDGGFPGPKAHNCLCSALHASWQ*SWAQAR
Trigger: CCTGGCCTGGGCCCAGGAGCACTGCCATGAGGCATG...TAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp AGGTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCGCTGGTCGGCTCTGGTaGGACCTCAGCAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: RLMEGSLGPRHTTACALLAGRLW*DLSSSR
Trigger: CCTGGAACTGCTGAGGTCCCACCAGAGCCGACCAGC...GAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp TGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGATACCACGGTGAGCAGGTaGGAGCCCCAGAGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: WRVPWAQGTQLPVLCSTDTTVSR*EPQSGS
Trigger: ACTGCCGCTCTGGGGCTCCCACCTGCTCACCGTGGT...ATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp CCGCACCACGGTGAGCAGGTGGGAGCCCCAGAGCGGCAGTGTCTCCCCCAGCCACCAAGAACCATATACTaGGTCCTGTCTCAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: PHHGEQVGAPERQCLPQPPRTIY*VLSQVD
Trigger: ATCAACCTGAGACAGGACTCAGTATATGGTTCTTGG...TGGCTGGGGGAGACACTGCCGCTCTGGGGCTCCCACCTGCTCACCGTGGTGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR GCA 90 bp TCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAACTTCCCCGAGCGCCCTaGGGTTCCTGCCGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: STRCSLGWSTHAEISGQELPRAP*GSCRLL
Trigger: GAGGAGGCGGCAGGAACCGCAGGGCGCTCGGGGAAG...TTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CAGCTCCCCATGTCCACTGACAGCCACACCCAGGCTTCAGGTGGAGGTGAGGCTTGCTTAGGGTACAGCTaGCTCCAGACGCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: QLPMSTDSHTQASGGGEACLGYS*LQTLAL
Trigger: CAGTGCCAGCGTCTGGAGGCAGCTGTACCCTAAGCA...AGCCTCACCTCCACCTGAAGCCTGGGTGTGGCTGTCAGTGGACATGGGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCATGCCTCATGGCAGTaGTCCTGGGCCCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LQSWMVYPCRNQWPGRQGHASWQ*SWAQAR
Trigger: CCTGGCCTGGGCCCAGGAGCACTGCCATGAGGCATG...GCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR CCA 90 bp CAGTGGAGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGCCGTCTTGGTCGCCATaGCTCGCAGCCCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: QWREAEPCDQDPQHDGEWPSWSP*LAALPP
Trigger: AGGAGGGAGGGCTGCGAGCCATGGCGACCAAGACGG...CCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCTCCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTGCTGGCCTCTGCATGCCTCATaGCAGTGCTCCTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GWSTHAEISGQEGRAYCWPLHAS*QCSWAQ
Trigger: CTGGGCCCAGGAGCACTGCCATGAGGCATGCAGAGG...CCAGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
CDS-3UTR TCA 90 bp ACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGCCAGCAGCCCTCGGATaGTCCCACGTAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: TATFYPLQSWMVYPCRNQPAALG*SHVAPG
Trigger: GCCGGGAGCTACGTGGGATCATCCGAGGGCTGCTGG...CTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000435172.6
CDS-3UTR TCA 90 bp ATGGGGAATGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACAGGGAGGGCCAGCAGCCCTCGGATaGTCCCACGTAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: MGNGKLEEVGLQGRGQGGPAALG*SHVAPG
Trigger: GCCGGGAGCTACGTGGGATCATCCGAGGGCTGCTGG...CCCTCCCTGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000435172.6
CDS-3UTR TCA 90 bp CAGCTCCCCATGTCCACTGACAGCCACACCCAGGCTTCAGGTGGAGGTGAGGCTTTGGCAAAACCTGCTTaGCCCAGGGCCCACATGATG +
Preference number: 4 (lower is better)
Translates to: QLPMSTDSHTQASGGGEALAKPA*PRAHMM
Trigger: CATCATGTGGGCCCTGGGTCAAGCAGGTTTTGCCAA...AGCCTCACCTCCACCTGAAGCCTGGGTGTGGCTGTCAGTGGACATGGGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp GAGGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTTGGGCCGCACCACGGTaGGCAGGTGGGAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: EVRLLFPNAVLYSSGSPFWAAPR*AGGSPR
Trigger: TCTGGGGCTCCCACCTGCTCACCGTGGTGCGGCCCA...AAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp GTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTATTGTGGGTAGGAGGCTaGGATGCTGCTGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: VDGGFPGPKAHNCLCSALLWVGG*DAAGPC
Trigger: ACAGGGCCCAGCAGCATCTCAGCCTCCTACCCACAA...TAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp TACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCATGCCTCATGGCAGTaGTCCTGGGCCCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: YPLQSWMVYPCRNQWPGRHASWQ*SWAQAR
Trigger: CCTGGCCTGGGCCCAGGAGCACTGCCATGAGGCATG...CCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR CCA 90 bp GCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGGCTGGTCGGCTCTGGTaGGACCTCAGCAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: AAVLDGLPMQKSVARKAGAGRLW*DLSSSR
Trigger: CCTGGAACTGCTGAGGTCCCACCAGAGCCGACCAGC...CCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGACCGGAGGTCATaGCACAGGAAGCCTACAGCG +
Preference number: 4 (lower is better)
Translates to: ESCLRLMEGSLGPRHTTACDRRS*HRKPTA
Trigger: CGCTGTAGGCTTCCTGTGCCATGACCTCCGGTCACA...GGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp ATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCACGGTGAGCAGGTaGGAGCCCCAGAGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: MEELRWRQLATCLGENSGTTVSR*EPQSGS
Trigger: ACTGCCGCTCTGGGGCTCCCACCTGCTCACCGTGGT...GCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
CDS-3UTR CCA 90 bp TGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGATGGCAGGGCCTACTGCTaGGATATCAGGGCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: WRVPWAQGTQLPVLCSTDGRAYC*DIRASA
Trigger: GGCACTTGCCCTGATATCCCAGCAGTAGGCCCTGCC...ATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CAGCTCCCCATGTCCACTGACAGCCACACCCAGGCTTCAGGTGGAGGTGAGGCTGGGCTTAGAGGCATTTaGGGCAGGCTGGGCATTTTG +
Preference number: 4 (lower is better)
Translates to: QLPMSTDSHTQASGGGEAGLRGI*GRLGIL
Trigger: CAAAATGCCCAGCCTGCCCCAAATGCCTCTAAGCCC...AGCCTCACCTCCACCTGAAGCCTGGGTGTGGCTGTCAGTGGACATGGGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp TTTCCTTCTGCTGTGGCTAGAGCTGTGACCAAGAATGGGAACAGGAGGCTGCTACCAGCAGCCCTCGGATaGTCCCACGTAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: FPSAVARAVTKNGNRRLLPAALG*SHVAPG
Trigger: GCCGGGAGCTACGTGGGATCATCCGAGGGCTGCTGG...TAGCAGCCTCCTGTTCCCATTCTTGGTCACAGCTCTAGCCACAGCAGAAGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000435172.6
CDS-3UTR TCA 90 bp GTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACCAGCACAGGCAGCATaGTCCCCAGCCACACTTTCA +
Preference number: 4 (lower is better)
Translates to: VDGGFPGPKAHNCLCSALPAQAA*SPATLS
Trigger: TGAAAGTGTGGCTGGGGATCATGCTGCCTGTGCTGG...TAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp AGGAAGTGGAAGGCAGAGGGCAAGGGCGGAGTTGTGAGAGGCTACCAGCACAAGCCAGCACAGGCAGCATaGTCCCCAGCCACACTTTCA +
Preference number: 4 (lower is better)
Translates to: RKWKAEGKGGVVRGYQHKPAQAA*SPATLS
Trigger: TGAAAGTGTGGCTGGGGATCATGCTGCCTGTGCTGG...CTTGTGCTGGTAGCCTCTCACAACTCCGCCCTTGCCCTCTGCCTTCCACTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR TCA 90 bp TGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGATCCAAACCACGCAAGGTaGGAGGCACAGTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: WRVPWAQGTQLPVLCSTDPNHAR*EAQWAE
Trigger: TTCTGCCCACTGTGCCTCTCACCTTGCGTGGTTTGG...ATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp CAGCTCCCCATGTCCACTGACAGCCACACCCAGGCTTCAGGTGGAGGTGAGGCTCTGTGGCTAGAGCTGTaGCCAAGAATGGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: QLPMSTDSHTQASGGGEALWLEL*PRMGTG
Trigger: TCCTGTTCCCATTCTTGGTCACAGCTCTAGCCACAG...AGCCTCACCTCCACCTGAAGCCTGGGTGTGGCTGTCAGTGGACATGGGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp GAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCCCAAGACCCCCAGCATaGTGGGGAATGGAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: ESCLRLMEGSLGPRHTTAPRPPA*WGMESW
Trigger: CCAACTTTCCATTCCCCATCATGCTGGGGGTCTTGG...GGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp AGGTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCCCAAGACCCCCAGCATaGTGGGGAATGGAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: RLMEGSLGPRHTTACALLPRPPA*WGMESW
Trigger: CCAACTTTCCATTCCCCATCATGCTGGGGGTCTTGG...GAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGGCAGGGGGTGGGACCTaGTCCTTATTCTGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: AAVLDGLPMQKSVARKAGAGGGT*SLFCRF
Trigger: GAAGCGGCAGAATAAGGAGCAGGTCCCACCCCCTGC...CCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCCCACCTTCTACCCGCTaGAGTCTTGGATGGTCTACC +
Preference number: 4 (lower is better)
Translates to: ESCLRLMEGSLGPRHTTAPPSTR*SLGWST
Trigger: GGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGG...GGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCACCGTCTTGGTCGCCATaGCTCGCAGCCCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: QEPYTESCLRLMEGSLGPPSWSP*LAALPP
Trigger: AGGAGGGAGGGCTGCGAGCCATGGCGACCAAGACGG...TGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp TGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGATTTTGCTGGTCGGCTCTaGTGGGACCTCAGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: WRVPWAQGTQLPVLCSTDFAGRL*WDLSSS
Trigger: GGAACTGCTGAGGTCCCACCAGAGCCGACCAGCAAA...ATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCGCTGCTCCTGCAGGCTaGGTGTCAGGGAGTTGTTCG +
Preference number: 4 (lower is better)
Translates to: LQSWMVYPCRNQWPGRQGAAPAG*VSGSCS
Trigger: CGAACAACTCCCTGACACCCAGCCTGCAGGAGCAGC...GCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GATGGACAGTGGAGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGCCAGTAAGGGAGGCCTaGAAGGAGCTGTGTGACCGG +
Preference number: 4 (lower is better)
Translates to: DGQWREAEPCDQDPQHDGPVREA*KELCDR
Trigger: CCGGTCACACAGCTCCTTCCAGGCCTCCCTTACTGG...CCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCTCCACTGTCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTGGAAGAACCACGGTGAGCAGGTaGGAGCCCCAGAGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: AEPCDQDPQHDGEWKVGRTTVSR*EPQSGS
Trigger: ACTGCCGCTCTGGGGCTCCCACCTGCTCACCGTGGT...TCTTCCAACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGCAAAGCCAGGTCCAGTaGACAGCCTCACTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: DGGFPGPKAHNCLCSALQQSQVQ*TASLSC
Trigger: ACAGCTCAGTGAGGCTGTCCACTGGACCTGGCTTTG...CTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GATGGACAGTGGAGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGGCAGGGCCTACTGCTaGGATATCAGGGCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: DGQWREAEPCDQDPQHDGGRAYC*DIRASA
Trigger: GGCACTTGCCCTGATATCCCAGCAGTAGGCCCTGCC...CCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCTCCACTGTCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGAGGCTGAGATGCTGCTaGGCCCTGTCCCCACCAAAG +
Preference number: 4 (lower is better)
Translates to: ELRWRQLATCLGENSGTKRLRCC*ALSPPK
Trigger: CTTTGGTGGGGACAGGGCCCAGCAGCATCTCAGCCT...CTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR TCA 90 bp CTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTGGGCAGCCGAGGACCCTaGACCTGCTGCAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: LFPNAVLYSSGSPFPSAVGSRGP*TCCNRP
Trigger: GGGCCTGTTGCAGCAGGTTCAGGGTCCTCGGCTGCC...CACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp CCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCTGGAAGGAGCTGTGTaGCCGGAGGTCATGGCACAG +
Preference number: 4 (lower is better)
Translates to: PPSTRCSLGWSTHAEISGLEGAV*PEVMAQ
Trigger: CTGTGCCATGACCTCCGGTCACACAGCTCCTTCCAG...GCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR TCA 90 bp GTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATTGGGCCGCACCACGGTaGGCAGGTGGGAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: VKKTPMKNCHLLPAAVLDWAAPR*AGGSPR
Trigger: TCTGGGGCTCCCACCTGCTCACCGTGGTGCGGCCCA...ATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR TCA 90 bp GGCTGGGGGCCATGTGCAGTAGGGCCAGAAAAGTGTTCAGTGGAATTGTGGGTAACTGTGGCATTGGTGTaGGCCCAGGCCAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: GWGPCAVGPEKCSVELWVTVALV*AQASCK
Trigger: CTTGCAGCTGGCCTGGGCTCACACCAATGCCACAGT...TACCCACAATTCCACTGAACACTTTTCTGGCCCTACTGCACATGGCCCCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR TCA 90 bp CTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGACTGTGGCATTGGTGTaGGCCCAGGCCAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: LPAAVLDGLPMQKSVARKTVALV*AQASCK
Trigger: CTTGCAGCTGGCCTGGGCTCACACCAATGCCACAGT...CTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR TCA 90 bp CTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGAGTCCTGTCTCAGGTTaGTGGAGGGTTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LPAAVLDGLPMQKSVARKSPVSG*WRVPWA
Trigger: GGCCCAGGGAACCCTCCATCAACCTGAGACAGGACT...CTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp TCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTGCTGGGATATCAGTCCTGTCTCAGGTTaGTGGAGGGTTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: STHAEISGQEGRAYCWDISPVSG*WRVPWA
Trigger: GGCCCAGGGAACCCTCCATCAACCTGAGACAGGACT...GATATCCCAGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR GCA 90 bp GTGGAGGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCACACTCCGTTTaGTTCCCCGAGCGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: VEVRLLFPNAVLYSSGSPFPHSV*FPERPA
Trigger: CGCAGGGCGCTCGGGGAAGCAAACGGAGTGTGGAAA...GGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp TACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGGCAGGGGGTGGGACCTaGTCCTTATTCTGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: YPLQSWMVYPCRNQWPGRAGGGT*SLFCRF
Trigger: GAAGCGGCAGAATAAGGAGCAGGTCCCACCCCCTGC...CCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGTGCTTAGGGTACAGCTaGCTCCAGACGCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: AAVLDGLPMQKSVARKAGCLGYS*LQTLAL
Trigger: CAGTGCCAGCGTCTGGAGGCAGCTGTACCCTAAGCA...CCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CAGTGGAGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGCAGGAGCTGAGCAAGTaGTCCAGCAGAAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: QWREAEPCDQDPQHDGEWQELSK*SSRRLD
Trigger: GTCCAGCCTTCTGCTGGAGCACTTGCTCAGCTCCTG...CCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCTCCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp AACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCACATGCCTCATGGCAGTaGTCCTGGGCCCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: NCHLLPAAVLDGLPMQKSHASWQ*SWAQAR
Trigger: CCTGGCCTGGGCCCAGGAGCACTGCCATGAGGCATG...TGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR GCA 90 bp ATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGGGTAGGAGGCTGAGATaGTGCTGGGCCCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: MKNCHLLPAAVLDGLPMQGRRLR*CWALSP
Trigger: TGGGGACAGGGCCCAGCAGCATCTCAGCCTCCTACC...CTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp GTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACCCAAGGCACACAACTaGCTGTGCTCTGCTCTACAG +
Preference number: 4 (lower is better)
Translates to: VDGGFPGPKAHNCLCSALPKAHN*LCSALQ
Trigger: CTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGG...TAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp ACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGCTGGTCGGCTCTGGTaGGACCTCAGCAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: TFYPLQSWMVYPCRNQWPAGRLW*DLSSSR
Trigger: CCTGGAACTGCTGAGGTCCCACCAGAGCCGACCAGC...TGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCAGCTGGTCGGCTCTGGTaGGACCTCAGCAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: QEPYTESCLRLMEGSLGPAGRLW*DLSSSR
Trigger: CCTGGAACTGCTGAGGTCCCACCAGAGCCGACCAGC...TGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGGGTGAGACACTTTGCTaGTCGGCTCTGGTGGGACCT +
Preference number: 4 (lower is better)
Translates to: AAVLDGLPMQKSVARKAGGETLC*SALVGP
Trigger: AGGTCCCACCAGAGCCGACCAGCAAAGTGTCTCACC...CCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp TTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTGCTCCAGTAAGGGAGGCCTaGAAGGAGCTGTGTGACCGG +
Preference number: 4 (lower is better)
Translates to: LDGLPMQKSVARKAGPTAPVREA*KELCDR
Trigger: CCGGTCACACAGCTCCTTCCAGGCCTCCCTTACTGG...AGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR CCA 90 bp TTTCCTTCTGCTGTGGCTAGAGCTGTGACCAAGAATGGGAACAGGAGGCTGCTAACCACGGTGAGCAGGTaGGAGCCCCAGAGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: FPSAVARAVTKNGNRRLLTTVSR*EPQSGS
Trigger: ACTGCCGCTCTGGGGCTCCCACCTGCTCACCGTGGT...TAGCAGCCTCCTGTTCCCATTCTTGGTCACAGCTCTAGCCACAGCAGAAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGATGGAAGAACTGAGGTaGAGGCAACTGGCCACTTGC +
Preference number: 4 (lower is better)
Translates to: DGGFPGPKAHNCLCSALQMEELR*RQLATC
Trigger: GCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCAT...CTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp GGCTGGGGGCCATGTGCAGTAGGGCCAGAAAAGTGTTCAGTGGAATTGTGGGTACACAAGGATGGAGGCTaGGGGCCATGTGCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: GWGPCAVGPEKCSVELWVHKDGG*GPCAVG
Trigger: CCCTACTGCACATGGCCCCCAGCCTCCATCCTTGTG...TACCCACAATTCCACTGAACACTTTTCTGGCCCTACTGCACATGGCCCCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR TCA 90 bp CTAGCAGGTAAGAAGCCAGATGATCGAAGCAACCGGCCAGTAAGGGAGGCCTGGTTGGCAAAACCTGCTTaGCCCAGGGCCCACATGATG +
Preference number: 4 (lower is better)
Translates to: LAGKKPDDRSNRPVREAWLAKPA*PRAHMM
Trigger: CATCATGTGGGCCCTGGGTCAAGCAGGTTTTGCCAA...CCAGGCCTCCCTTACTGGCCGGTTGCTTCGATCATCTGGCTTCTTACCTGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR TCA 90 bp TACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCCAGCACAGGCAGCATaGTCCCCAGCCACACTTTCA +
Preference number: 4 (lower is better)
Translates to: YPLQSWMVYPCRNQWPGRPAQAA*SPATLS
Trigger: TGAAAGTGTGGCTGGGGATCATGCTGCCTGTGCTGG...CCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp ACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCACTGGAAGGAGCTGTGTaGCCGGAGGTCATGGCACAG +
Preference number: 4 (lower is better)
Translates to: TFYPLQSWMVYPCRNQWPLEGAV*PEVMAQ
Trigger: CTGTGCCATGACCTCCGGTCACACAGCTCCTTCCAG...TGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR TCA 90 bp GAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGTTAAAACTGTGGCATTGGTGTaGGCCCAGGCCAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: EVEATGHLPRRELRHQVKTVALV*AQASCK
Trigger: CTTGCAGCTGGCCTGGGCTCACACCAATGCCACAGT...TTTAACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
CDS-3UTR TCA 90 bp ATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCCCAAACCACGCAAGGTaGGAGGCACAGTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: MEELRWRQLATCLGENSGPNHAR*EAQWAE
Trigger: TTCTGCCCACTGTGCCTCTCACCTTGCGTGGTTTGG...GCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
CDS-3UTR TCA 90 bp GGCTGGGGGCCATGTGCAGTAGGGCCAGAAAAGTGTTCAGTGGAATTGTGGGTAGGCTTCAGGTGGAGGTaGGGCTGCTGTTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: GWGPCAVGPEKCSVELWVGFRWR*GCCFPM
Trigger: CATTGGGAAACAGCAGCCTCACCTCCACCTGAAGCC...TACCCACAATTCCACTGAACACTTTTCTGGCCCTACTGCACATGGCCCCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR TCA 90 bp GATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGGCAGGCTGGGCATTTTaGAGTGAGAGGCATTTCCAT +
Preference number: 4 (lower is better)
Translates to: DGGFPGPKAHNCLCSALQAGWAF*SERHFH
Trigger: ATGGAAATGCCTCTCACTTCAAAATGCCCAGCCTGC...CTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp ACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGAGTCCTGTCTCAGGTTaGTGGAGGGTTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TATFYPLQSWMVYPCRNQSPVSG*WRVPWA
Trigger: GGCCCAGGGAACCCTCCATCAACCTGAGACAGGACT...CTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp ATGGGGAATGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACAGGGAGGGGCAGGGGGTGGGACCTaGTCCTTATTCTGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: MGNGKLEEVGLQGRGQGGAGGGT*SLFCRF
Trigger: GAAGCGGCAGAATAAGGAGCAGGTCCCACCCCCTGC...CCCTCCCTGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTTGGTTGGGAGGAGTTaGCACCTTCTTTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: ESCLRLMEGSLGPRHTTALVGRS*HLLWLL
Trigger: AAGCAGCCAAAGAAGGTGGCAACTCCTCCCAACCAA...GGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GATGGACAGTGGAGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGCGGCTTTGCTCCAAATaGCAGCACTTTCAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: DGQWREAEPCDQDPQHDGRLCSK*QHFQSG
Trigger: CCCCGACTGAAAGTGCTGGCATTTGGAGCAAAGCCG...CCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCTCCACTGTCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp AGGTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCGGTGGAATCCGGCTTTaGTCCAAATGCCAGCACTTT +
Preference number: 4 (lower is better)
Translates to: RLMEGSLGPRHTTACALLGGIRL*SKCQHF
Trigger: AAAGTGCTGGCATTTGGAGCAAAGCCGGATTCCACC...GAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GTGGAGGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCCAGGAGCTGAGCAAGTaGTCCAGCAGAAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: VEVRLLFPNAVLYSSGSPQELSK*SSRRLD
Trigger: GTCCAGCCTTCTGCTGGAGCACTTGCTCAGCTCCTG...GGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACCTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCGCCTCAAGCAAGAGGTaGCACAGTGGCAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: PPSTRCSLGWSTHAEISGASSKR*HSGSST
Trigger: TGTGCTGCTGCCACTGTGGCACCTCTTGCTTGAGGC...GCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR GCA 90 bp GTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTGCTGGGATATCACCTCACCTCTGCATaGCTCATGGCAGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: VYPCRNQWPGRQGLLLGYHLTSA*LMAVLL
Trigger: CAGGAGCACTGCCATGAGGCATGCAGAGGTGAGGTG...ATATCCCAGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
CDS-3UTR GCA 90 bp AGGGCCTCAAGCAAGAGGTGCCACAGTGGCAGCAGCACATTCTGGTGGAAAAGCGAAGGCAGGGCCTACTaGTGGGATATCAGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: RASSKRCHSGSSTFWWKSEGRAY*WDIRAS
Trigger: ACTTGCCCTGATATCCCAGCAGTAGGCCCTGCCTTC...GCTTTTCCACCAGAATGTGCTGCTGCCACTGTGGCACCTCTTGCTTGAGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
CDS-3UTR CCA 90 bp CATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGCCGTCTTGGTCGCCATaGCTCGCAGCCCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: HTQEPYTESCLRLMEGSLPSWSP*LAALPP
Trigger: AGGAGGGAGGGCTGCGAGCCATGGCGACCAAGACGG...CAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTGGGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp TGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGATTTGCCGTGGCAATCTTaGGCTTGTCTTGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: WRVPWAQGTQLPVLCSTDLPWQS*ACLAGW
Trigger: CCATCCTGCAAGACAAGCCCAAGATTGCCACGGCAA...ATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp AAGGAAGTGGAAGGCAGAGGGCAAGGGCGGAGTTGTGAGAGGCTACCAGCACAAGTGGGAAGAAGTCCTTaGGGCCAATCATGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: KEVEGRGQGRSCERLPAQVGRSP*GQSCRS
Trigger: GCTTCGGCATGATTGGCCCCAAGGACTTCTTCCCAC...TTGTGCTGGTAGCCTCTCACAACTCCGCCCTTGCCCTCTGCCTTCCACTTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp GATGGACAGTGGAGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGTGGGAAGAAGTCCTTaGGGCCAATCATGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: DGQWREAEPCDQDPQHDGVGRSP*GQSCRS
Trigger: GCTTCGGCATGATTGGCCCCAAGGACTTCTTCCCAC...CCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCTCCACTGTCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCACCAGTAAGGGAGGCCTaGAAGGAGCTGTGTGACCGG +
Preference number: 4 (lower is better)
Translates to: QEPYTESCLRLMEGSLGPPVREA*KELCDR
Trigger: CCGGTCACACAGCTCCTTCCAGGCCTCCCTTACTGG...TGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTGGAAGAGGCAGGGCCTACTGCTaGGATATCAGGGCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: AEPCDQDPQHDGEWKVGRGRAYC*DIRASA
Trigger: GGCACTTGCCCTGATATCCCAGCAGTAGGCCCTGCC...TCTTCCAACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp AGGTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTATTCTGCCGCTTCATaGTATTCTCAAAGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: RLMEGSLGPRHTTACALLYSAAS*YSQSPA
Trigger: AGCGGGGCTTTGAGAATATCATGAAGCGGCAGAATA...GAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp GGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCCCAGCACAGGCAGCATaGTCCCCAGCCACACTTTCA +
Preference number: 4 (lower is better)
Translates to: GEAAVSQCGAIFFWKPLSPAQAA*SPATLS
Trigger: TGAAAGTGTGGCTGGGGATCATGCTGCCTGTGCTGG...GGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp GCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGAGGCCATGTCACAGGTaGCGACATCCTGGTTGTTAC +
Preference number: 4 (lower is better)
Translates to: AAVLDGLPMQKSVARKAGRPCHR*RHPGCY
Trigger: GTAACAACCAGGATGTCGTCACCTGTGACATGGCCT...CCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR TCA 90 bp GAGGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCTGGAAGGAGCTGTGTaGCCGGAGGTCATGGCACAG +
Preference number: 4 (lower is better)
Translates to: EVRLLFPNAVLYSSGSPFLEGAV*PEVMAQ
Trigger: CTGTGCCATGACCTCCGGTCACACAGCTCCTTCCAG...AAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp AGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTATGGGCCGCACCACGGTaGGCAGGTGGGAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: RELRHQVKKTPMKNCHLLWAAPR*AGGSPR
Trigger: TCTGGGGCTCCCACCTGCTCACCGTGGTGCGGCCCA...TAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR TCA 90 bp GGCTGGGGGCCATGTGCAGTAGGGCCAGAAAAGTGTTCAGTGGAATTGTGGGTAGGGCAGAAAGGAAGCTaGCTGTGGCATTGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: GWGPCAVGPEKCSVELWVGQKGS*LWHWCE
Trigger: CTCACACCAATGCCACAGTCAGCTTCCTTTCTGCCC...TACCCACAATTCCACTGAACACTTTTCTGGCCCTACTGCACATGGCCCCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR TCA 90 bp CCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGGGGCAGAAAGGAAGCTaGCTGTGGCATTGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: PMKNCHLLPAAVLDGLPMGQKGS*LWHWCE
Trigger: CTCACACCAATGCCACAGTCAGCTTCCTTTCTGCCC...CATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR TCA 90 bp ACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGCCAAACCACGCAAGGTaGGAGGCACAGTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: TATFYPLQSWMVYPCRNQPNHAR*EAQWAE
Trigger: TTCTGCCCACTGTGCCTCTCACCTTGCGTGGTTTGG...CTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR TCA 90 bp ACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGCTTCAGGTGGAGGTaGGGCTGCTGTTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: TFYPLQSWMVYPCRNQWPGFRWR*GCCFPM
Trigger: CATTGGGAAACAGCAGCCTCACCTCCACCTGAAGCC...TGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp AAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTAAGTCCTGTCTCAGGTTaGTGGAGGGTTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KTPMKNCHLLPAAVLDGLSPVSG*WRVPWA
Trigger: GGCCCAGGGAACCCTCCATCAACCTGAGACAGGACT...TAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GATGGACAGTGGAGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGCCCGCTCATAAAGGGTaGTTGTGGTCTGGATTGCAG +
Preference number: 4 (lower is better)
Translates to: DGQWREAEPCDQDPQHDGPAHKG*LWSGLQ
Trigger: CTGCAATCCAGACCACAAGCACCCTTTATGAGCGGG...CCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCTCCACTGTCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp ATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGCTGCGGAAGCGGCCCTaGTTCTGGTTTTGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: MKNCHLLPAAVLDGLPMQLRKRP*FWFWLG
Trigger: TCCCAACCAAAACCAGAAGCAGGGCCGCTTCCGCAG...CTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp ACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCACTGCGGAAGCGGCCCTaGTTCTGGTTTTGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: TFYPLQSWMVYPCRNQWPLRKRP*FWFWLG
Trigger: TCCCAACCAAAACCAGAAGCAGGGCCGCTTCCGCAG...TGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp AGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGATGGTGAGACACTTTaGTGGTCGGCTCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: RTEVEATGHLPRRELRHQDGETL*WSALVG
Trigger: TCCCACCAGAGCCGACCAGCAAAGTGTCTCACCATC...TTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp GAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCAAGGGATGGTGAGACACTTTaGTGGTCGGCTCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: EPYTESCLRLMEGSLGPRDGETL*WSALVG
Trigger: TCCCACCAGAGCCGACCAGCAAAGTGTCTCACCATC...CCTTGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp TACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGGATGGTGAGACACTTTaGTGGTCGGCTCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: YPLQSWMVYPCRNQWPGRDGETL*WSALVG
Trigger: TCCCACCAGAGCCGACCAGCAAAGTGTCTCACCATC...CCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GTGGAGGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCGAGGTTGGCAAAACCTaGTTGACCCAGGGCCCACAT +
Preference number: 4 (lower is better)
Translates to: VEVRLLFPNAVLYSSGSPEVGKT*LTQGPH
Trigger: ATGTGGGCCCTGGGTCAAGCAGGTTTTGCCAACCTC...GGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTGCTGGGATATGAGGTTGGCAAAACCTaGTTGACCCAGGGCCCACAT +
Preference number: 4 (lower is better)
Translates to: VYPCRNQWPGRQGLLLGYEVGKT*LTQGPH
Trigger: ATGTGGGCCCTGGGTCAAGCAGGTTTTGCCAACCTC...ATATCCCAGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR GCA 90 bp CAGTGGAGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGGGCACTCAGTCAGGCTaGTCAGGAGCTCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: QWREAEPCDQDPQHDGEWGTQSG*SGALSS
Trigger: TGAAGAAAGAGCTCCTGAGCAGCCTGACTGAGTGCC...CCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCTCCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
CDS-3UTR GCA 90 bp GCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTGGAAGATGCTTAGGGTACAGCTaGCTCCAGACGCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: AEPCDQDPQHDGEWKVGRCLGYS*LQTLAL
Trigger: CAGTGCCAGCGTCTGGAGGCAGCTGTACCCTAAGCA...TCTTCCAACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp ACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCACAGGAGCTGAGCAAGTaGTCCAGCAGAAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: TFYPLQSWMVYPCRNQWPQELSK*SSRRLD
Trigger: GTCCAGCCTTCTGCTGGAGCACTTGCTCAGCTCCTG...TGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGTTAAACAGGAGCTGAGCAAGTaGTCCAGCAGAAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: EVEATGHLPRRELRHQVKQELSK*SSRRLD
Trigger: GTCCAGCCTTCTGCTGGAGCACTTGCTCAGCTCCTG...TTTAACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp ACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGGCCTCAAGCAAGAGGTaGCACAGTGGCAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: TATFYPLQSWMVYPCRNQASSKR*HSGSST
Trigger: TGTGCTGCTGCCACTGTGGCACCTCTTGCTTGAGGC...CTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR GCA 90 bp TGTGACCAAGAATGGGAACAGGAGGCTGCTAAAGTCTGGAGAAGCAGGAATCATCATGCCTCATGGCAGTaGTCCTGGGCCCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CDQEWEQEAAKVWRSRNHHASWQ*SWAQAR
Trigger: CCTGGCCTGGGCCCAGGAGCACTGCCATGAGGCATG...ATGATTCCTGCTTCTCCAGACTTTAGCAGCCTCCTGTTCCCATTCTTGGTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp ACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGCACCTCACCTCTGCATaGCTCATGGCAGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: TATFYPLQSWMVYPCRNQHLTSA*LMAVLL
Trigger: CAGGAGCACTGCCATGAGGCATGCAGAGGTGAGGTG...CTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR GCA 90 bp TGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGCACCTCACCTCTGCATaGCTCATGGCAGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: CHLLPAAVLDGLPMQKSVHLTSA*LMAVLL
Trigger: CAGGAGCACTGCCATGAGGCATGCAGAGGTGAGGTG...CACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR GCA 90 bp TACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCCACCTTCTACCCGCTaGAGTCTTGGATGGTCTACC +
Preference number: 4 (lower is better)
Translates to: YPLQSWMVYPCRNQWPGRPPSTR*SLGWST
Trigger: GGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGG...CCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR GCA 90 bp ATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCCCACCTTCTACCCGCTaGAGTCTTGGATGGTCTACC +
Preference number: 4 (lower is better)
Translates to: MEELRWRQLATCLGENSGPPSTR*SLGWST
Trigger: GGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGG...GCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
CDS-3UTR GCA 90 bp GATGGACAGTGGAGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGACTCCCATGAAGAACTaGCACCTTCTACCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: DGQWREAEPCDQDPQHDGTPMKN*HLLPAA
Trigger: TGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGT...CCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCTCCACTGTCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp ACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGTTAGGCAACTGGCCACTTaGCTAGGAGAGAACTCAGGC +
Preference number: 4 (lower is better)
Translates to: TEVEATGHLPRRELRHQVRQLAT*LGENSG
Trigger: GCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCT...AACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
CDS-3UTR GCA 90 bp CACCTGGTAGGGCATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGGTAGGAGGCTGAGATaGTGCTGGGCCCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: HLVGHTQEPYTESCLRLMGRRLR*CWALSP
Trigger: TGGGGACAGGGCCCAGCAGCATCTCAGCCTCCTACC...CATCAACCTGAGACAGGACTCAGTATATGGTTCTTGGGTATGCCCTACCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp ACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGTTCCCAAGGCACACAACTaGCTGTGCTCTGCTCTACAG +
Preference number: 4 (lower is better)
Translates to: TEVEATGHLPRRELRHQVPKAHN*LCSALQ
Trigger: CTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGG...AACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp AGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACCACGCCCGCCGTCTTaGTCGCCATGGCTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: RELRHQVKKTPMKNCHLLPRPPS*SPWLAA
Trigger: GGCTGCGAGCCATGGCGACCAAGACGGCGGGCGTGG...TAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp ATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCCCCTGCTTCTGGTTTTaGTTGGGAGGAGTTGCCACC +
Preference number: 4 (lower is better)
Translates to: MEELRWRQLATCLGENSGPCFWF*LGGVAT
Trigger: GGTGGCAACTCCTCCCAACCAAAACCAGAAGCAGGG...GCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp CAGGTCCAGTGGACAGCCTCACTGAGCTGTGTCTTCATGCAGTCCCAGGTCACCTATGCTGGCTCAGCGTaGGTTCACTTAGAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: QVQWTASLSCVFMQSQVTYAGSA*VHLEEL
Trigger: AAGCTCCTCTAAGTGAACCCACGCTGAGCCAGCATA...GGTGACCTGGGACTGCATGAAGACACAGCTCAGTGAGGCTGTCCACTGGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR CCA 90 bp ATGGGGAATGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACAGGGAGGGGGTGAGACACTTTGCTaGTCGGCTCTGGTGGGACCT +
Preference number: 4 (lower is better)
Translates to: MGNGKLEEVGLQGRGQGGGETLC*SALVGP
Trigger: AGGTCCCACCAGAGCCGACCAGCAAAGTGTCTCACC...CCCTCCCTGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CTGGGGGCCATGTGCAGTAGGGCCAGAAAAGTGTTCAGTGGAATTGTGGGTAGGGGCAAAGTCCAGAAGTaGGAAGAAGTCCTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LGAMCSRARKVFSGIVGRGKVQK*EEVLGA
Trigger: GGCCCCAAGGACTTCTTCCCACTTCTGGACTTTGCC...CCTACCCACAATTCCACTGAACACTTTTCTGGCCCTACTGCACATGGCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp TTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTGCTGGCAAAGTCCAGAAGTaGGAAGAAGTCCTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LDGLPMQKSVARKAGPTAGKVQK*EEVLGA
Trigger: GGCCCCAAGGACTTCTTCCCACTTCTGGACTTTGCC...AGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR CCA 90 bp AGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTGCTGCTCCTGCAGGCTaGGTGTCAGGGAGTTGTTCG +
Preference number: 4 (lower is better)
Translates to: REAEPCDQDPQHDGEWKVAAPAG*VSGSCS
Trigger: CGAACAACTCCCTGACACCCAGCCTGCAGGAGCAGC...AACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCTGTGACCGGAGGTCATaGCACAGGAAGCCTACAGCG +
Preference number: 4 (lower is better)
Translates to: ELPPSTRCSLGWSTHAEICDRRS*HRKPTA
Trigger: CGCTGTAGGCTTCCTGTGCCATGACCTCCGGTCACA...GATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR CCA 90 bp TGGGATCCATCTTCTGAGGGTGAAGCTCGAGTGAGCGGGGCAGGCAGCTGTCAATTGGCACACGCTTGTTaGCTAGCAGGTAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: WDPSSEGEARVSGAGSCQLAHAC*LAGKKP
Trigger: TGGCTTCTTACCTGCTAGCCAACAAGCGTGTGCCAA...TTGACAGCTGCCTGCCCCGCTCACTCGAGCTTCACCCTCAGAAGATGGATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR CCA 90 bp CACCTGGTAGGGCATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGCCTCTGCATGCCTCATaGCAGTGCTCCTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HLVGHTQEPYTESCLRLMPLHAS*QCSWAQ
Trigger: CTGGGCCCAGGAGCACTGCCATGAGGCATGCAGAGG...CATCAACCTGAGACAGGACTCAGTATATGGTTCTTGGGTATGCCCTACCAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
CDS-3UTR CCA 90 bp CTGGTAGGGCATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGCCTCTGCATGCCTCATaGCAGTGCTCCTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LVGHTQEPYTESCLRLMEPLHAS*QCSWAQ
Trigger: CTGGGCCCAGGAGCACTGCCATGAGGCATGCAGAGG...CTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTGGGTATGCCCTACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp TACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAAAGCCAGGTCCAGTaGACAGCCTCACTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: YPLQSWMVYPCRNQWPGRQSQVQ*TASLSC
Trigger: ACAGCTCAGTGAGGCTGTCCACTGGACCTGGCTTTG...CCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR CCA 90 bp AAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAAGGCAGGGCCTACTGCTaGGATATCAGGGCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: KNCHLLPAAVLDGLPMQKGRAYC*DIRASA
Trigger: GGCACTTGCCCTGATATCCCAGCAGTAGGCCCTGCC...TTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR CCA 90 bp GAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCAAGGGGGCTTAGAGGCATTTaGGGCAGGCTGGGCATTTTG +
Preference number: 4 (lower is better)
Translates to: EPYTESCLRLMEGSLGPRGLRGI*GRLGIL
Trigger: CAAAATGCCCAGCCTGCCCCAAATGCCTCTAAGCCC...CCTTGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCGGGCTTAGAGGCATTTaGGGCAGGCTGGGCATTTTG +
Preference number: 4 (lower is better)
Translates to: PPSTRCSLGWSTHAEISGGLRGI*GRLGIL
Trigger: CAAAATGCCCAGCCTGCCCCAAATGCCTCTAAGCCC...GCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR CAA 72 bp CCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTaGGATGGTCTACCCATGCAGAAATCAGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PMKNCHLLPAAV*DGLPMQKSVAR
Trigger: CCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR TCA 90 bp GAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCGCTCTTGCAACATGGTaGACAGACAGTGGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: ESCLRLMEGSLGPRHTTAALATW*TDSGQK
Trigger: TTTTTGACCACTGTCTGTTCACCATGTTGCAAGAGC...GGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000435172.6
CDS-3UTR TCA 90 bp CCCTTTCCTTCTGCTGTGGCTAGAGCTGTGACCAAGAATGGGAACAGGAGGCTGCTTTCAGTCCCTCGGTaGGGTTGGCAAAACCTGCTT +
Preference number: 4 (lower is better)
Translates to: PFPSAVARAVTKNGNRRLLSVPR*GWQNLL
Trigger: AAGCAGGTTTTGCCAACCTCACCGAGGGACTGAAAG...CAGCCTCCTGTTCCCATTCTTGGTCACAGCTCTAGCCACAGCAGAAGGAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp CCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCAGGCCATGTCACAGGTaGCGACATCCTGGTTGTTAC +
Preference number: 4 (lower is better)
Translates to: PPSTRCSLGWSTHAEISGRPCHR*RHPGCY
Trigger: GTAACAACCAGGATGTCGTCACCTGTGACATGGCCT...GCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR TCA 90 bp CACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGCCATGTCACAGGTaGCGACATCCTGGTTGTTAC +
Preference number: 4 (lower is better)
Translates to: HLLPAAVLDGLPMQKSVARPCHR*RHPGCY
Trigger: GTAACAACCAGGATGTCGTCACCTGTGACATGGCCT...GGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR TCA 90 bp AAGTCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCGGCAGCCGAGGACCCTaGACCTGCTGCAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: KSRRELRHQVKKTPMKNCGSRGP*TCCNRP
Trigger: GGGCCTGTTGCAGCAGGTTCAGGGTCCTCGGCTGCC...GCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321326.11
ENST00000435172.6
CDS-3UTR TCA 90 bp AGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTAGGCAGCCGAGGACCCTaGACCTGCTGCAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: RELRHQVKKTPMKNCHLLGSRGP*TCCNRP
Trigger: GGGCCTGTTGCAGCAGGTTCAGGGTCCTCGGCTGCC...TAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR TCA 90 bp GCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTCTGGAAGGAGCTGTGTaGCCGGAGGTCATGGCACAG +
Preference number: 4 (lower is better)
Translates to: AVSQCGAIFFWKPLSFCCLEGAV*PEVMAQ
Trigger: CTGTGCCATGACCTCCGGTCACACAGCTCCTTCCAG...ACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp ATGGGGAATGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACAGGGAGGGGGGCAGAAAGGAAGCTaGCTGTGGCATTGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: MGNGKLEEVGLQGRGQGGGQKGS*LWHWCE
Trigger: CTCACACCAATGCCACAGTCAGCTTCCTTTCTGCCC...CCCTCCCTGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCAT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp CAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCAGGGCAGAAAGGAAGCTaGCTGTGGCATTGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: QEPYTESCLRLMEGSLGPGQKGS*LWHWCE
Trigger: CTCACACCAATGCCACAGTCAGCTTCCTTTCTGCCC...TGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp CCCTTTCCTTCTGCTGTGGCTAGAGCTGTGACCAAGAATGGGAACAGGAGGCTGTGGATCTGTAGCCTCTaGGAGAGACTGGTGAGACTG +
Preference number: 4 (lower is better)
Translates to: PFPSAVARAVTKNGNRRLWICSL*ERLVRL
Trigger: CAGTCTCACCAGTCTCTCTCAGAGGCTACAGATCCA...CAGCCTCCTGTTCCCATTCTTGGTCACAGCTCTAGCCACAGCAGAAGGAAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp CCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAAAGATGGAAGAACTaGGGTGGAGGCAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: PPSTRCSLGWSTHAEISGQRWKN*GGGNWP
Trigger: TGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTG...GCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
CDS-3UTR TCA 90 bp CATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGCAAGGGCGGAGTTGTaGGAGGCTACCAGCACAAGG +
Preference number: 4 (lower is better)
Translates to: HTQEPYTESCLRLMEGSLARAEL*EATSTR
Trigger: CCTTGTGCTGGTAGCCTCTCACAACTCCGCCCTTGC...CAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTGGGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR TCA 90 bp CAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCACCAAGACCCCCAGCATaGTGGGGAATGGAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: QEPYTESCLRLMEGSLGPPRPPA*WGMESW
Trigger: CCAACTTTCCATTCCCCATCATGCTGGGGGTCTTGG...TGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CAAGACCCCCAGCATGATGGGGAATGGAAAGTTGGAAGAAGTAGGACTACAAGGGCAGGGGGTGGGACCTaGTCCTTATTCTGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: QDPQHDGEWKVGRSRTTRAGGGT*SLFCRF
Trigger: GAAGCGGCAGAATAAGGAGCAGGTCCCACCCCCTGC...CCTTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCATCATGCTGGGGGTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CAGTGGAGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGGCCACCTTCTTTGGCTaGTTCTTGTTCCCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: QWREAEPCDQDPQHDGEWATFFG*FLFPGF
Trigger: GAAACCAGGGAACAAGAAGCAGCCAAAGAAGGTGGC...CCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCTCCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGTTGGTTGGGAGGAGTTaGCACCTTCTTTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: ELRWRQLATCLGENSGTKLVGRS*HLLWLL
Trigger: AAGCAGCCAAAGAAGGTGGCAACTCCTCCCAACCAA...CTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp GCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCCTGCGGAAGCGGCCCTaGTTCTGGTTTTGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: ATGHLPRRELRHQVKKTPLRKRP*FWFWLG
Trigger: TCCCAACCAAAACCAGAAGCAGGGCCGCTTCCGCAG...GGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp AAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACTGCGGAAGCGGCCCTaGTTCTGGTTTTGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: KTPMKNCHLLPAAVLDGLLRKRP*FWFWLG
Trigger: TCCCAACCAAAACCAGAAGCAGGGCCGCTTCCGCAG...TAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACTTCCTTCTGCAGGTCTaGCACATCCAGAGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: GRTEVEATGHLPRRELRHFLLQV*HIQSFQ
Trigger: CTGAAAGCTCTGGATGTGGCAGACCTGCAGAAGGAA...GTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp GCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGTTGTCCAGTTCCTTCTaGAGGTCTGCCACATCCAGA +
Preference number: 4 (lower is better)
Translates to: AAVLDGLPMQKSVARKAGLSSSF*RSATSR
Trigger: TCTGGATGTGGCAGACCTGCAGAAGGAACTGGACAA...CCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGGTCTTATCCAGCTCTTaGAACATGGTGAACAGACAG +
Preference number: 4 (lower is better)
Translates to: DGGFPGPKAHNCLCSALQVLSSS*NMVNRQ
Trigger: CTGTCTGTTCACCATGTTGCAAGAGCTGGATAAGAC...CTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000435172.6
CDS-3UTR GCA 90 bp GTGGAGGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTGGTAAGGTTGGGATaGATCAGGAGCAGCCGATCC +
Preference number: 4 (lower is better)
Translates to: VEVRLLFPNAVLYSSGSPLVRLG*IRSSRS
Trigger: GGATCGGCTGCTCCTGATGCATCCCAACCTTACCAA...GGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCTTGGTAAGGTTGGGATaGATCAGGAGCAGCCGATCC +
Preference number: 4 (lower is better)
Translates to: HLLPAAVLDGLPMQKSVALVRLG*IRSSRS
Trigger: GGATCGGCTGCTCCTGATGCATCCCAACCTTACCAA...GGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CTGGGGGCCATGTGCAGTAGGGCCAGAAAAGTGTTCAGTGGAATTGTGGGTAGGTTGGTAAGGTTGGGATaGATCAGGAGCAGCCGATCC +
Preference number: 4 (lower is better)
Translates to: LGAMCSRARKVFSGIVGRLVRLG*IRSSRS
Trigger: GGATCGGCTGCTCCTGATGCATCCCAACCTTACCAA...CCTACCCACAATTCCACTGAACACTTTTCTGGCCCTACTGCACATGGCCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp CTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCATCCTGGTTGTTACTaGTACCCTTCCTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LQSWMVYPCRNQWPGRQGHPGCY*YPSSAA
Trigger: AGCTGCTGAGGAAGGGTAGCAGTAACAACCAGGATG...GCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR GCA 90 bp AGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTGCCTCAAGCAAGAGGTaGCACAGTGGCAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: REAEPCDQDPQHDGEWKVASSKR*HSGSST
Trigger: TGTGCTGCTGCCACTGTGGCACCTCTTGCTTGAGGC...AACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGGCCTCAAGCAAGAGGTaGCACAGTGGCAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: GCCFPMRCYILLEAPFLLASSKR*HSGSST
Trigger: TGTGCTGCTGCCACTGTGGCACCTCTTGCTTGAGGC...CAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp ACCAAAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAAGCCTCAAGCAAGAGGTaGCACAGTGGCAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: TKDGRTEVEATGHLPRREASSKR*HSGSST
Trigger: TGTGCTGCTGCCACTGTGGCACCTCTTGCTTGAGGC...TTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
CDS-3UTR GCA 90 bp AGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTCACCTCACCTCTGCATaGCTCATGGCAGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: REAEPCDQDPQHDGEWKVHLTSA*LMAVLL
Trigger: CAGGAGCACTGCCATGAGGCATGCAGAGGTGAGGTG...AACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CCCTTTCCTTCTGCTGTGGCTAGAGCTGTGACCAAGAATGGGAACAGGAGGCTGGGATATCAGGGCAAGTaGCCAGTCCAAGAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: PFPSAVARAVTKNGNRRLGYQGK*PVQESH
Trigger: GTGGCTTTCTTGGACTGGGCACTTGCCCTGATATCC...CAGCCTCCTGTTCCCATTCTTGGTCACAGCTCTAGCCACAGCAGAAGGAAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp ATGGGGAATGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACAGGGAGGGGAAGGCAGGGCCTACTaGTGGGATATCAGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: MGNGKLEEVGLQGRGQGGEGRAY*WDIRAS
Trigger: ACTTGCCCTGATATCCCAGCAGTAGGCCCTGCCTTC...CCCTCCCTGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGTGGATGGTCTACCCATaGAGAAATCAGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: AAVLDGLPMQKSVARKAGWMVYP*RNQWPG
Trigger: TCCTGGCCACTGATTTCTGCATGGGTAGACCATCCA...CCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR GCA 90 bp AAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTAGGCTGGGGGCCATGTaGAGTAGGGCCAGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: KDSHEELPPSTRCSLGWSRLGAM*SRARKV
Trigger: CACTTTTCTGGCCCTACTGCACATGGCCCCCAGCCT...AGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp GATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGTGTTTCCCAATGCGGTaGTATATTCTTCTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: DGGFPGPKAHNCLCSALQCFPMR*YILLEA
Trigger: GGCTTCCAGAAGAATATAGCACCGCATTGGGAAACA...CTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp TGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGATGCACACAACTGCCTGTaGTCTGCTCTACAGATGATA +
Preference number: 4 (lower is better)
Translates to: WRVPWAQGTQLPVLCSTDAHNCL*SALQMI
Trigger: TATCATCTGTAGAGCAGAGCACAGGCAGTTGTGTGC...ATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CCAAAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACCCCAAGGCACACAACTaGCTGTGCTCTGCTCTACAG +
Preference number: 4 (lower is better)
Translates to: PKMEELRWRQLATCLGENPKAHN*LCSALQ
Trigger: CTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGG...GTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp GCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCAGGGTGCTTGTGGTCTaGATTGCAGGGGTCAGGTCG +
Preference number: 4 (lower is better)
Translates to: ATGHLPRRELRHQVKKTPRVLVV*IAGVRS
Trigger: CGACCTGACCCCTGCAATCCAGACCACAAGCACCCT...GGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp AAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTAGGGTGCTTGTGGTCTaGATTGCAGGGGTCAGGTCG +
Preference number: 4 (lower is better)
Translates to: KDSHEELPPSTRCSLGWSRVLVV*IAGVRS
Trigger: CGACCTGACCCCTGCAATCCAGACCACAAGCACCCT...AGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GAGGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTAGGGTGCTTGTGGTCTaGATTGCAGGGGTCAGGTCG +
Preference number: 4 (lower is better)
Translates to: EVRLLFPNAVLYSSGSPFRVLVV*IAGVRS
Trigger: CGACCTGACCCCTGCAATCCAGACCACAAGCACCCT...AAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCACCCTGCTTCTGGTTTTaGTTGGGAGGAGTTGCCACC +
Preference number: 4 (lower is better)
Translates to: QEPYTESCLRLMEGSLGPPCFWF*LGGVAT
Trigger: GGTGGCAACTCCTCCCAACCAAAACCAGAAGCAGGG...TGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp TTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGATGATAGGAAAGCGGCCCTGCTTCTaGTTTTGGTTGGGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: FPGPKAHNCLCSALQMIGKRPCF*FWLGGV
Trigger: AACTCCTCCCAACCAAAACCAGAAGCAGGGCCGCTT...TCCTATCATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGAAGCGGCCCTGCTTCTaGTTTTGGTTGGGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: LPAAVLDGLPMQKSVARKKRPCF*FWLGGV
Trigger: AACTCCTCCCAACCAAAACCAGAAGCAGGGCCGCTT...CTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CCACCAAAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAAGCGGCCCTGCTTCTaGTTTTGGTTGGGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: PPKMEELRWRQLATCLGEKRPCF*FWLGGV
Trigger: AACTCCTCCCAACCAAAACCAGAAGCAGGGCCGCTT...CTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp GTGGAGGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCGCTTGTCTTGCAGGATaGCCTGGATACAGATGCGGT +
Preference number: 4 (lower is better)
Translates to: VEVRLLFPNAVLYSSGSPACLAG*PGYRCG
Trigger: ACCGCATCTGTATCCAGGCCATCCTGCAAGACAAGC...GGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGTTGCCGTGGCAATCTTaGGCTTGTCTTGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: PMKNCHLLPAAVLDGLPMLPWQS*ACLAGW
Trigger: CCATCCTGCAAGACAAGCCCAAGATTGCCACGGCAA...CATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTTTGCTGGTCGGCTCTaGTGGGACCTCAGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: VRLLFPNAVLYSSGSPFPFAGRL*WDLSSS
Trigger: GGAACTGCTGAGGTCCCACCAGAGCCGACCAGCAAA...AGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp ACCAAAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAAGGTGAGACACTTTGCTaGTCGGCTCTGGTGGGACCT +
Preference number: 4 (lower is better)
Translates to: TKDGRTEVEATGHLPRREGETLC*SALVGP
Trigger: AGGTCCCACCAGAGCCGACCAGCAAAGTGTCTCACC...TTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp GCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTGGAAGAGTGGGAAGAAGTCCTTaGGGCCAATCATGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: AEPCDQDPQHDGEWKVGRVGRSP*GQSCRS
Trigger: GCTTCGGCATGATTGGCCCCAAGGACTTCTTCCCAC...TCTTCCAACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp AGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGCTCCTGCAGGCTaGGTGTCAGGGAGTTGTTCG +
Preference number: 4 (lower is better)
Translates to: RLLFPNAVLYSSGSPFPSAAPAG*VSGSCS
Trigger: CGAACAACTCCCTGACACCCAGCCTGCAGGAGCAGC...AGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CTGGTAGGGCATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGCTGCTCCTGCAGGCTaGGTGTCAGGGAGTTGTTCG +
Preference number: 4 (lower is better)
Translates to: LVGHTQEPYTESCLRLMEAAPAG*VSGSCS
Trigger: CGAACAACTCCCTGACACCCAGCCTGCAGGAGCAGC...CTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTGGGTATGCCCTACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGAGTAGGTATGCAGGGTaGAATCCGGCTTTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: ELRWRQLATCLGENSGTKSRYAG*NPALLQ
Trigger: TTGGAGCAAAGCCGGATTCCACCCTGCATACCTACT...CTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp TTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTGCTTTCCTCAGCAGCTCCTaGTTGGTAAGCTTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: LDGLPMQKSVARKAGPTAFLSSS*LVSLRD
Trigger: GTCCCTCAAGCTTACCAACCAGGAGCTGCTGAGGAA...AGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
CDS-3UTR CCA 90 bp CTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCAGGTGACGACATCCTaGTTGTTACTGCTACCCTTC +
Preference number: 4 (lower is better)
Translates to: LQSWMVYPCRNQWPGRQGQVTTS*LLLLPF
Trigger: GAAGGGTAGCAGTAACAACCAGGATGTCGTCACCTG...GCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR CCA 90 bp GAGGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTTGTGACCGGAGGTCATaGCACAGGAAGCCTACAGCG +
Preference number: 4 (lower is better)
Translates to: EVRLLFPNAVLYSSGSPFCDRRS*HRKPTA
Trigger: CGCTGTAGGCTTCCTGTGCCATGACCTCCGGTCACA...AAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp AAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATGTGACCGGAGGTCATaGCACAGGAAGCCTACAGCG +
Preference number: 4 (lower is better)
Translates to: KNCHLLPAAVLDGLPMQKCDRRS*HRKPTA
Trigger: CGCTGTAGGCTTCCTGTGCCATGACCTCCGGTCACA...TTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR CCA 90 bp GCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTCCAGTAAGGGAGGCCTaGAAGGAGCTGTGTGACCGG +
Preference number: 4 (lower is better)
Translates to: AVSQCGAIFFWKPLSFCCPVREA*KELCDR
Trigger: CCGGTCACACAGCTCCTTCCAGGCCTCCCTTACTGG...ACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp ATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGCAAGAGGTGCCACAGTaGCAGCAGCACATTCTGGTG +
Preference number: 4 (lower is better)
Translates to: MKNCHLLPAAVLDGLPMQQEVPQ*QQHILV
Trigger: CACCAGAATGTGCTGCTGCCACTGTGGCACCTCTTG...CTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR CCA 90 bp GAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGTTAAACAAGAGGTGCCACAGTaGCAGCAGCACATTCTGGTG +
Preference number: 4 (lower is better)
Translates to: EVEATGHLPRRELRHQVKQEVPQ*QQHILV
Trigger: CACCAGAATGTGCTGCTGCCACTGTGGCACCTCTTG...TTTAACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
CDS-3UTR CCA 90 bp CAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCACAAGAGGTGCCACAGTaGCAGCAGCACATTCTGGTG +
Preference number: 4 (lower is better)
Translates to: QEPYTESCLRLMEGSLGPQEVPQ*QQHILV
Trigger: CACCAGAATGTGCTGCTGCCACTGTGGCACCTCTTG...TGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp TGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGCAAAGCCAGGTCCAGTaGACAGCCTCACTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: CHLLPAAVLDGLPMQKSVQSQVQ*TASLSC
Trigger: ACAGCTCAGTGAGGCTGTCCACTGGACCTGGCTTTG...CACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR CCA 90 bp GGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCCAAAGCCAGGTCCAGTaGACAGCCTCACTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GEAAVSQCGAIFFWKPLSQSQVQ*TASLSC
Trigger: ACAGCTCAGTGAGGCTGTCCACTGGACCTGGCTTTG...GGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp TGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTGGAAGAAGTAGGACTGGCAGGGCCTACTGCTaGGATATCAGGGCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: CDQDPQHDGEWKVGRSRTGRAYC*DIRASA
Trigger: GGCACTTGCCCTGATATCCCAGCAGTAGGCCCTGCC...AGTCCTACTTCTTCCAACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGTACCCGCTGCAGTCTTaGATGGTCTACCCATGCAGA +
Preference number: 4 (lower is better)
Translates to: LPAAVLDGLPMQKSVARKYPLQS*MVYPCR
Trigger: TCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTA...CTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR CCA 90 bp ACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGTTATGGAAGAACTGAGGTaGAGGCAACTGGCCACTTGC +
Preference number: 4 (lower is better)
Translates to: TEVEATGHLPRRELRHQVMEELR*RQLATC
Trigger: GCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCAT...AACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
CDS-3UTR CCA 90 bp TTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTGGCTAAGGCTGAGATGCTGCTaGGCCCTGTCCCCACCAAAG +
Preference number: 4 (lower is better)
Translates to: FPMRCYILLEAPFLLLWLRLRCC*ALSPPK
Trigger: CTTTGGTGGGGACAGGGCCCAGCAGCATCTCAGCCT...TAGCCACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp GAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCCAGCATGATGGGGAATaGAAAGTTGGAAGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: ESCLRLMEGSLGPRHTTAQHDGE*KVGRSR
Trigger: CCTACTTCTTCCAACTTTCCATTCCCCATCATGCTG...GGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp GGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTGCTGGGCTCTTGCAACATGGTaGACAGACAGTGGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: GWSTHAEISGQEGRAYCWALATW*TDSGQK
Trigger: TTTTTGACCACTGTCTGTTCACCATGTTGCAAGAGC...CCAGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR TCA 90 bp GAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTGGACTTTCAGTCCCTCGGTaGGGTTGGCAAAACCTGCTT +
Preference number: 4 (lower is better)
Translates to: EAEPCDQDPQHDGEWKVGLSVPR*GWQNLL
Trigger: AAGCAGGTTTTGCCAACCTCACCGAGGGACTGAAAG...TCCAACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp ACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAAGGCCATGTCACAGGTaGCGACATCCTGGTTGTTAC +
Preference number: 4 (lower is better)
Translates to: TFYPLQSWMVYPCRNQWPRPCHR*RHPGCY
Trigger: GTAACAACCAGGATGTCGTCACCTGTGACATGGCCT...TGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR TCA 90 bp TTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTGGCTACCAAACCACGCAAGGTaGGAGGCACAGTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: FPMRCYILLEAPFLLLWLPNHAR*EAQWAE
Trigger: TTCTGCCCACTGTGCCTCTCACCTTGCGTGGTTTGG...TAGCCACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp CATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGCCAAACCACGCAAGGTaGGAGGCACAGTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: HTQEPYTESCLRLMEGSLPNHAR*EAQWAE
Trigger: TTCTGCCCACTGTGCCTCTCACCTTGCGTGGTTTGG...CAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTGGGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp GCTGTGGCTAGAGCTGTGACCAAGAATGGGAACAGGAGGCTGCTAAAGTCTGGAAGTGGACAGCCTCACTaGGCTGTGTCTTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: AVARAVTKNGNRRLLKSGSGQPH*AVSSCS
Trigger: ACTGCATGAAGACACAGCTCAGTGAGGCTGTCCACT...TCCAGACTTTAGCAGCCTCCTGTTCCCATTCTTGGTCACAGCTCTAGCCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR TCA 90 bp TTATTCCACCTGGTAGGGCATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTGTGGGTAGGAGGCTaGGATGCTGCTGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LFHLVGHTQEPYTESCLRLWVGG*DAAGPC
Trigger: ACAGGGCCCAGCAGCATCTCAGCCTCCTACCCACAA...CCTGAGACAGGACTCAGTATATGGTTCTTGGGTATGCCCTACCAGGTGGAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR TCA 90 bp TCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAACTGTGGCTAGAGCTGTaGCCAAGAATGGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: STRCSLGWSTHAEISGQELWLEL*PRMGTG
Trigger: TCCTGTTCCCATTCTTGGTCACAGCTCTAGCCACAG...TTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp TTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTGGCTAGGCTTCAGGTGGAGGTaGGGCTGCTGTTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: FPMRCYILLEAPFLLLWLGFRWR*GCCFPM
Trigger: CATTGGGAAACAGCAGCCTCACCTCCACCTGAAGCC...TAGCCACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp AGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGGCTTCAGGTGGAGGTaGGGCTGCTGTTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: RLLFPNAVLYSSGSPFPSGFRWR*GCCFPM
Trigger: CATTGGGAAACAGCAGCCTCACCTCCACCTGAAGCC...AGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp GAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCAAGGCTGGGCATTTTGAAGTaGGAGGCATTTCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: EPYTESCLRLMEGSLGPRLGILK*EAFPSS
Trigger: GCTGGATGGAAATGCCTCTCACTTCAAAATGCCCAG...CCTTGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp CCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCTGGGCATTTTGAAGTaGGAGGCATTTCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: PPSTRCSLGWSTHAEISGLGILK*EAFPSS
Trigger: GCTGGATGGAAATGCCTCTCACTTCAAAATGCCCAG...GCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCGCCACCTTCTTTGGCTaGTTCTTGTTCCCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: PPSTRCSLGWSTHAEISGATFFG*FLFPGF
Trigger: GAAACCAGGGAACAAGAAGCAGCCAAAGAAGGTGGC...GCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp TTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGATGATAGGATTGGTTGGGAGGAGTTaGCACCTTCTTTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FPGPKAHNCLCSALQMIGLVGRS*HLLWLL
Trigger: AAGCAGCCAAAGAAGGTGGCAACTCCTCCCAACCAA...TCCTATCATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp TCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAATCCAGAGCTTTCAGTaGTTCCTCCAGGCTGCGGAA +
Preference number: 4 (lower is better)
Translates to: STRCSLGWSTHAEISGQEIQSFQ*FLQAAE
Trigger: TTCCGCAGCCTGGAGGAAGCACTGAAAGCTCTGGAT...TTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGATCTTGGGCTTGTCTTaGAGGATGGCCTGGATACAG +
Preference number: 4 (lower is better)
Translates to: PMKNCHLLPAAVLDGLPMILGLS*RMAWIQ
Trigger: CTGTATCCAGGCCATCCTGCAAGACAAGCCCAAGAT...CATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCAAGGATCTTGGGCTTGTCTTaGAGGATGGCCTGGATACAG +
Preference number: 4 (lower is better)
Translates to: EPYTESCLRLMEGSLGPRILGLS*RMAWIQ
Trigger: CTGTATCCAGGCCATCCTGCAAGACAAGCCCAAGAT...CCTTGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp AACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGATGGTGAGACACTTTaGTGGTCGGCTCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: NCHLLPAAVLDGLPMQKSDGETL*WSALVG
Trigger: TCCCACCAGAGCCGACCAGCAAAGTGTCTCACCATC...TGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp TTTCCTTCTGCTGTGGCTAGAGCTGTGACCAAGAATGGGAACAGGAGGCTGCTAGAGGTTGGCAAAACCTaGTTGACCCAGGGCCCACAT +
Preference number: 4 (lower is better)
Translates to: FPSAVARAVTKNGNRRLLEVGKT*LTQGPH
Trigger: ATGTGGGCCCTGGGTCAAGCAGGTTTTGCCAACCTC...TAGCAGCCTCCTGTTCCCATTCTTGGTCACAGCTCTAGCCACAGCAGAAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp TGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACAGGGAGGGGCTTAGAGTTGGTAAGGTTGGGATaGATCAGGAGCAGCCGATCC +
Preference number: 4 (lower is better)
Translates to: WKVGRSRTTREGTGRGLELVRLG*IRSSRS
Trigger: GGATCGGCTGCTCCTGATGCATCCCAACCTTACCAA...CTCTAAGCCCCTCCCTGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp AGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTCGGCTTTGCTCCAAATaGCAGCACTTTCAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: REAEPCDQDPQHDGEWKVRLCSK*QHFQSG
Trigger: CCCCGACTGAAAGTGCTGGCATTTGGAGCAAAGCCG...AACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp TACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGGGTGGAATCCGGCTTTaGTCCAAATGCCAGCACTTT +
Preference number: 4 (lower is better)
Translates to: YPLQSWMVYPCRNQWPGRGGIRL*SKCQHF
Trigger: AAAGTGCTGGCATTTGGAGCAAAGCCGGATTCCACC...CCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp TCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTGCTGGGATATCGGTGGAATCCGGCTTTaGTCCAAATGCCAGCACTTT +
Preference number: 4 (lower is better)
Translates to: STHAEISGQEGRAYCWDIGGIRL*SKCQHF
Trigger: AAAGTGCTGGCATTTGGAGCAAAGCCGGATTCCACC...GATATCCCAGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR GCA 90 bp CCAAAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACGGCACTCAGTCAGGCTaGTCAGGAGCTCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PKMEELRWRQLATCLGENGTQSG*SGALSS
Trigger: TGAAGAAAGAGCTCCTGAGCAGCCTGACTGAGTGCC...GTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp CATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGTGCTTAGGGTACAGCTaGCTCCAGACGCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: HTQEPYTESCLRLMEGSLCLGYS*LQTLAL
Trigger: CAGTGCCAGCGTCTGGAGGCAGCTGTACCCTAAGCA...CAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTGGGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CTGGTAGGGCATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGCACCTCACCTCTGCATaGCTCATGGCAGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LVGHTQEPYTESCLRLMEHLTSA*LMAVLL
Trigger: CAGGAGCACTGCCATGAGGCATGCAGAGGTGAGGTG...CTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTGGGTATGCCCTACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp AGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTAGGTCACCTCACCTCTaGATGCCTCATGGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: REAEPCDQDPQHDGEWKVRSPHL*MPHGSA
Trigger: AGCACTGCCATGAGGCATGCAGAGGTGAGGTGACCT...AACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp AAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTAGGTCACCTCACCTCTaGATGCCTCATGGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: KDSHEELPPSTRCSLGWSRSPHL*MPHGSA
Trigger: AGCACTGCCATGAGGCATGCAGAGGTGAGGTGACCT...AGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR GCA 90 bp CAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCAGGATATCAGGGCAAGTaGCCAGTCCAAGAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: QEPYTESCLRLMEGSLGPGYQGK*PVQESH
Trigger: GTGGCTTTCTTGGACTGGGCACTTGCCCTGATATCC...TGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp ACCAAAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAAGAAGGCAGGGCCTACTaGTGGGATATCAGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: TKDGRTEVEATGHLPRREEGRAY*WDIRAS
Trigger: ACTTGCCCTGATATCCCAGCAGTAGGCCCTGCCTTC...TTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
CDS-3UTR GCA 90 bp GGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGGAAGGCAGGGCCTACTaGTGGGATATCAGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: GCCFPMRCYILLEAPFLLEGRAY*WDIRAS
Trigger: ACTTGCCCTGATATCCCAGCAGTAGGCCCTGCCTTC...CAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp TACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGTGGATGGTCTACCCATaGAGAAATCAGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: YPLQSWMVYPCRNQWPGRWMVYP*RNQWPG
Trigger: TCCTGGCCACTGATTTCTGCATGGGTAGACCATCCA...CCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR GCA 90 bp AACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCACCACCTTCTACCCGCTaGAGTCTTGGATGGTCTACC +
Preference number: 4 (lower is better)
Translates to: NCHLLPAAVLDGLPMQKSPPSTR*SLGWST
Trigger: GGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGG...TGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR GCA 90 bp CCAAAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACACTCCCATGAAGAACTaGCACCTTCTACCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: PKMEELRWRQLATCLGENTPMKN*HLLPAA
Trigger: TGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGT...GTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
CDS-3UTR GCA 90 bp GCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCAGGCAACTGGCCACTTaGCTAGGAGAGAACTCAGGC +
Preference number: 4 (lower is better)
Translates to: ATGHLPRRELRHQVKKTPRQLAT*LGENSG
Trigger: GCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCT...GGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
CDS-3UTR GCA 90 bp CAGCATGATGGGGAATGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACAAGGCTGGGGGCCATGTaGAGTAGGGCCAGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: QHDGEWKVGRSRTTREGTRLGAM*SRARKV
Trigger: CACTTTTCTGGCCCTACTGCACATGGCCCCCAGCCT...TGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCATCATGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp GCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGGCACACAACTGCCTGTaGTCTGCTCTACAGATGATA +
Preference number: 4 (lower is better)
Translates to: AAVLDGLPMQKSVARKAGAHNCL*SALQMI
Trigger: TATCATCTGTAGAGCAGAGCACAGGCAGTTGTGTGC...CCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp AGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTAGGGTGCTTGTGGTCTaGATTGCAGGGGTCAGGTCG +
Preference number: 4 (lower is better)
Translates to: RLLFPNAVLYSSGSPFPSRVLVV*IAGVRS
Trigger: CGACCTGACCCCTGCAATCCAGACCACAAGCACCCT...AGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp TTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGATGATAGGACATAAAGGGTGCTTGTaGTCTGGATTGCAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: FPGPKAHNCLCSALQMIGHKGCL*SGLQGS
Trigger: TGACCCCTGCAATCCAGACCACAAGCACCCTTTATG...TCCTATCATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GCACACGCTTGTTGGCTAGCAGGTAAGAAGCCAGATGATCGAAGCAACCGGCCACATAAAGGGTGCTTGTaGTCTGGATTGCAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: AHACWLAGKKPDDRSNRPHKGCL*SGLQGS
Trigger: TGACCCCTGCAATCCAGACCACAAGCACCCTTTATG...TGGCCGGTTGCTTCGATCATCTGGCTTCTTACCTGCTAGCCAACAAGCGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR CCA 90 bp CTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTGCTTCTTGTTCCCTaGTTTCTTAGGTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: LQSWMVYPCRNQWPGRQGLLLVP*FLRFHS
Trigger: GCTGTGGAACCTAAGAAACCAGGGAACAAGAAGCAG...GCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GACTTCTGTACCTTCTTGGGAATCTGCTCCCAGGAGCTGAGCAAGTGCTCCAGCCCAGAGAACACACTCTaGCTCTTGTCCAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: DFCTFLGICSQELSKCSSPENTL*LLSSSF
Trigger: GAAGGAACTGGACAAGAGCCAGAGTGTGTTCTCTGG...GCTGGAGCACTTGCTCAGCTCCTGGGAGCAGATTCCCAAGAAGGTACAGAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR CCA 90 bp GATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGCTTCAACCATATGGATaGGTTTCCAGAGAACACACT +
Preference number: 4 (lower is better)
Translates to: DGGFPGPKAHNCLCSALQLQPYG*VSREHT
Trigger: AGTGTGTTCTCTGGAAACCCATCCATATGGTTGAAG...CTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGTATGCTGGCTCAGCGTaGGTTCACTTAGAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: LPAAVLDGLPMQKSVARKYAGSA*VHLEEL
Trigger: AAGCTCCTCTAAGTGAACCCACGCTGAGCCAGCATA...CTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp TACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGTATGCTGGCTCAGCGTaGGTTCACTTAGAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: YPLQSWMVYPCRNQWPGRYAGSA*VHLEEL
Trigger: AAGCTCCTCTAAGTGAACCCACGCTGAGCCAGCATA...CCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCAGCTTGTCTTGCAGGATaGCCTGGATACAGATGCGGT +
Preference number: 4 (lower is better)
Translates to: QEPYTESCLRLMEGSLGPACLAG*PGYRCG
Trigger: ACCGCATCTGTATCCAGGCCATCCTGCAAGACAAGC...TGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp TGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACAGGGAGGGGCTTAGAGTTGCCGTGGCAATCTTaGGCTTGTCTTGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: WKVGRSRTTREGTGRGLELPWQS*ACLAGW
Trigger: CCATCCTGCAAGACAAGCCCAAGATTGCCACGGCAA...CTCTAAGCCCCTCCCTGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp TACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGTGCCTAGGTTTGCCGTaGCAATCTTGGGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: YPLQSWMVYPCRNQWPGRCLGLP*QSWACL
Trigger: AAGACAAGCCCAAGATTGCCACGGCAAACCTAGGCA...CCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTGCTGGGATATTGCCTAGGTTTGCCGTaGCAATCTTGGGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: VYPCRNQWPGRQGLLLGYCLGLP*QSWACL
Trigger: AAGACAAGCCCAAGATTGCCACGGCAAACCTAGGCA...ATATCCCAGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR CCA 90 bp TGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTGGAAGAAGTAGGACTTTTGCTGGTCGGCTCTaGTGGGACCTCAGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: CDQDPQHDGEWKVGRSRTFAGRL*WDLSSS
Trigger: GGAACTGCTGAGGTCCCACCAGAGCCGACCAGCAAA...AGTCCTACTTCTTCCAACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GAGGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTGTGGGAAGAAGTCCTTaGGGCCAATCATGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: EVRLLFPNAVLYSSGSPFVGRSP*GQSCRS
Trigger: GCTTCGGCATGATTGGCCCCAAGGACTTCTTCCCAC...AAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp AAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAAGGCAAAGTCCAGAAGTaGGAAGAAGTCCTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: KNCHLLPAAVLDGLPMQKGKVQK*EEVLGA
Trigger: GGCCCCAAGGACTTCTTCCCACTTCTGGACTTTGCC...TTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CCAAAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTTCCTCAGCAGCTCCTaGTTGGTAAGCTTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: PKMEELRWRQLATCLGENFLSSS*LVSLRD
Trigger: GTCCCTCAAGCTTACCAACCAGGAGCTGCTGAGGAA...GTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
CDS-3UTR CCA 90 bp ACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCATTCCTCAGCAGCTCCTaGTTGGTAAGCTTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: TFYPLQSWMVYPCRNQWPFLSSS*LVSLRD
Trigger: GTCCCTCAAGCTTACCAACCAGGAGCTGCTGAGGAA...TGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR CCA 90 bp GGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCCTCAGCAGCTCCTaGTTGGTAAGCTTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: GEAAVSQCGAIFFWKPLSFLSSS*LVSLRD
Trigger: GTCCCTCAAGCTTACCAACCAGGAGCTGCTGAGGAA...GGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp TTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGATGATAGGACAGGTGACGACATCCTaGTTGTTACTGCTACCCTTC +
Preference number: 4 (lower is better)
Translates to: FPGPKAHNCLCSALQMIGQVTTS*LLLLPF
Trigger: GAAGGGTAGCAGTAACAACCAGGATGTCGTCACCTG...TCCTATCATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp AGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTCAAAGCCAGGTCCAGTaGACAGCCTCACTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: REAEPCDQDPQHDGEWKVQSQVQ*TASLSC
Trigger: ACAGCTCAGTGAGGCTGTCCACTGGACCTGGCTTTG...AACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp ATGGGGAATGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACAGGGAGGGTACCCGCTGCAGTCTTaGATGGTCTACCCATGCAGA +
Preference number: 4 (lower is better)
Translates to: MGNGKLEEVGLQGRGQGGYPLQS*MVYPCR
Trigger: TCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTA...CCCTCCCTGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp TGTGACCAAGAATGGGAACAGGAGGCTGCTAAAGTCTGGAGAAGCAGGAATCATCACAAGGATGGAGGCTaGGGGCCATGTGCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: CDQEWEQEAAKVWRSRNHHKDGG*GPCAVG
Trigger: CCCTACTGCACATGGCCCCCAGCCTCCATCCTTGTG...ATGATTCCTGCTTCTCCAGACTTTAGCAGCCTCCTGTTCCCATTCTTGGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp GAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGGGTGCTATATTCTTCTaGAAGCCCCTTTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: ELRWRQLATCLGENSGTKGAIFF*KPLSFC
Trigger: GCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACC...CTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp AGGGCCTCAAGCAAGAGGTGCCACAGTGGCAGCAGCACATTCTGGTGGAAAAGCGAATGTGCTGTCTCTTaGGATCCATCTTCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: RASSKRCHSGSSTFWWKSECAVS*DPSSEG
Trigger: ACCCTCAGAAGATGGATCCCAAGAGACAGCACATTC...GCTTTTCCACCAGAATGTGCTGCTGCCACTGTGGCACCTCTTGCTTGAGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR TCA 90 bp GTGGAGGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTATTCTGCCGCTTCATaGTATTCTCAAAGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: VEVRLLFPNAVLYSSGSPYSAAS*YSQSPA
Trigger: AGCGGGGCTTTGAGAATATCATGAAGCGGCAGAATA...GGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp TTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGATGATAGGATATTCTGCCGCTTCATaGTATTCTCAAAGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: FPGPKAHNCLCSALQMIGYSAAS*YSQSPA
Trigger: AGCGGGGCTTTGAGAATATCATGAAGCGGCAGAATA...TCCTATCATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp GCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTGGAAGACTTGTAGCTTGTAGTTaGGATAGCTGGCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: AEPCDQDPQHDGEWKVGRLVACS*DSWPGP
Trigger: AGGACCTGGCCAGCTATCTCAACTACAAGCTACAAG...TCTTCCAACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp CTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCGTAAGCTTGAGGGACTaGATGGTTTCTTGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: LQSWMVYPCRNQWPGRQGVSLRD*MVSCKD
Trigger: GTCTTTGCAAGAAACCATTCAGTCCCTCAAGCTTAC...GCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR TCA 90 bp TTTCCTTCTGCTGTGGCTAGAGCTGTGACCAAGAATGGGAACAGGAGGCTGCTAAGGCCATGTCACAGGTaGCGACATCCTGGTTGTTAC +
Preference number: 4 (lower is better)
Translates to: FPSAVARAVTKNGNRRLLRPCHR*RHPGCY
Trigger: GTAACAACCAGGATGTCGTCACCTGTGACATGGCCT...TAGCAGCCTCCTGTTCCCATTCTTGGTCACAGCTCTAGCCACAGCAGAAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp AAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCATGGATCTGTAGCCTCTaGGAGAGACTGGTGAGACTG +
Preference number: 4 (lower is better)
Translates to: KMEELRWRQLATCLGENSWICSL*ERLVRL
Trigger: CAGTCTCACCAGTCTCTCTCAGAGGCTACAGATCCA...TGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
CDS-3UTR TCA 90 bp AAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTAGTGGACAGCCTCACTaGGCTGTGTCTTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: KDSHEELPPSTRCSLGWSSGQPH*AVSSCS
Trigger: ACTGCATGAAGACACAGCTCAGTGAGGCTGTCCACT...AGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR TCA 90 bp GAACAGGAGGCTGCTAAAGTCTGGAGAAGCAGGAATCATTTGTCAGAAGAACACGCAAGGGCGGAGTTGTaGGAGGCTACCAGCACAAGG +
Preference number: 4 (lower is better)
Translates to: EQEAAKVWRSRNHLSEEHARAEL*EATSTR
Trigger: CCTTGTGCTGGTAGCCTCTCACAACTCCGCCCTTGC...GTGTTCTTCTGACAAATGATTCCTGCTTCTCCAGACTTTAGCAGCCTCCTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR TCA 90 bp AGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTCTGTGGCTAGAGCTGTaGCCAAGAATGGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: REAEPCDQDPQHDGEWKVLWLEL*PRMGTG
Trigger: TCCTGTTCCCATTCTTGGTCACAGCTCTAGCCACAG...AACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp ACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCACTGGGCATTTTGAAGTaGGAGGCATTTCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: TFYPLQSWMVYPCRNQWPLGILK*EAFPSS
Trigger: GCTGGATGGAAATGCCTCTCACTTCAAAATGCCCAG...TGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp TGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACAGGGAGGGGCTTAGAGGCAGGCTGGGCATTTTaGAGTGAGAGGCATTTCCAT +
Preference number: 4 (lower is better)
Translates to: WKVGRSRTTREGTGRGLEAGWAF*SERHFH
Trigger: ATGGAAATGCCTCTCACTTCAAAATGCCCAGCCTGC...CTCTAAGCCCCTCCCTGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp ACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGGCAGGCTGGGCATTTTaGAGTGAGAGGCATTTCCAT +
Preference number: 4 (lower is better)
Translates to: TATFYPLQSWMVYPCRNQAGWAF*SERHFH
Trigger: ATGGAAATGCCTCTCACTTCAAAATGCCCAGCCTGC...CTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp GCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTCCAAGACCCCCAGCATaGTGGGGAATGGAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: AVSQCGAIFFWKPLSFCCPRPPA*WGMESW
Trigger: CCAACTTTCCATTCCCCATCATGCTGGGGGTCTTGG...ACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp AAGGAAGTGGAAGGCAGAGGGCAAGGGCGGAGTTGTGAGAGGCTACCAGCACAACCAAGAACCATATACTaGGTCCTGTCTCAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: KEVEGRGQGRSCERLPAQPRTIY*VLSQVD
Trigger: ATCAACCTGAGACAGGACTCAGTATATGGTTCTTGG...TTGTGCTGGTAGCCTCTCACAACTCCGCCCTTGCCCTCTGCCTTCCACTTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR TCA 90 bp CTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTTGTAGTGACTCCCCATaGGTATGCTGGCTCAGCGTG +
Preference number: 4 (lower is better)
Translates to: LRHQVKKTPMKNCHLLPACSDSP*VCWLSV
Trigger: CACGCTGAGCCAGCATACTCATGGGGAGTCACTACA...AGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404032.7
CDS-3UTR TCA 90 bp AGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTAGGCTGCTCAGGAGCTaGATGTGCTGTCTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: RLLFPNAVLYSSGSPFPSRLLRS*MCCLLG
Trigger: TCCCAAGAGACAGCACATTCAGCTCCTGAGCAGCCT...AGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR GCA 90 bp ACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGCTTGTGGTCTGGATTaGAGGGGTCAGGTCGTATTT +
Preference number: 4 (lower is better)
Translates to: TFYPLQSWMVYPCRNQWPACGLD*RGQVVF
Trigger: AAATACGACCTGACCCCTGCAATCCAGACCACAAGC...TGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp AAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTCCCGCTCATAAAGGGTaGTTGTGGTCTGGATTGCAG +
Preference number: 4 (lower is better)
Translates to: KDSHEELPPSTRCSLGWSPAHKG*LWSGLQ
Trigger: CTGCAATCCAGACCACAAGCACCCTTTATGAGCGGG...AGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp AGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGTTAAAACCCGCTCATAAAGGGTaGTTGTGGTCTGGATTGCAG +
Preference number: 4 (lower is better)
Translates to: RWRQLATCLGENSGTKLKPAHKG*LWSGLQ
Trigger: CTGCAATCCAGACCACAAGCACCCTTTATGAGCGGG...TTTTAACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp GAGGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCCGCTCATAAAGGGTaGTTGTGGTCTGGATTGCAG +
Preference number: 4 (lower is better)
Translates to: EVRLLFPNAVLYSSGSPFPAHKG*LWSGLQ
Trigger: CTGCAATCCAGACCACAAGCACCCTTTATGAGCGGG...AAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp TGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGATACCTGCTCCTTATTCTaGCGCTTCATGATATTCTCA +
Preference number: 4 (lower is better)
Translates to: WRVPWAQGTQLPVLCSTDTCSLF*RFMIFS
Trigger: TGAGAATATCATGAAGCGGCAGAATAAGGAGCAGGT...ATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTGGAAGAGCCACCTTCTTTGGCTaGTTCTTGTTCCCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: AEPCDQDPQHDGEWKVGRATFFG*FLFPGF
Trigger: GAAACCAGGGAACAAGAAGCAGCCAAAGAAGGTGGC...TCTTCCAACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTGGAAGATTGGTTGGGAGGAGTTaGCACCTTCTTTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: AEPCDQDPQHDGEWKVGRLVGRS*HLLWLL
Trigger: AAGCAGCCAAAGAAGGTGGCAACTCCTCCCAACCAA...TCTTCCAACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGATCCAGAGCTTTCAGTaGTTCCTCCAGGCTGCGGAA +
Preference number: 4 (lower is better)
Translates to: GCCFPMRCYILLEAPFLLIQSFQ*FLQAAE
Trigger: TTCCGCAGCCTGGAGGAAGCACTGAAAGCTCTGGAT...CAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp ACCAAAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAAATCCAGAGCTTTCAGTaGTTCCTCCAGGCTGCGGAA +
Preference number: 4 (lower is better)
Translates to: TKDGRTEVEATGHLPRREIQSFQ*FLQAAE
Trigger: TTCCGCAGCCTGGAGGAAGCACTGAAAGCTCTGGAT...TTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp CCAAAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTTGTCCAGTTCCTTCTaGAGGTCTGCCACATCCAGA +
Preference number: 4 (lower is better)
Translates to: PKMEELRWRQLATCLGENLSSSF*RSATSR
Trigger: TCTGGATGTGGCAGACCTGCAGAAGGAACTGGACAA...GTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp CTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTGGAGGTTGGCAAAACCTaGTTGACCCAGGGCCCACAT +
Preference number: 4 (lower is better)
Translates to: LFPNAVLYSSGSPFPSAVEVGKT*LTQGPH
Trigger: ATGTGGGCCCTGGGTCAAGCAGGTTTTGCCAACCTC...CACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CTGGTAGGGCATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGCGGCTTTGCTCCAAATaGCAGCACTTTCAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: LVGHTQEPYTESCLRLMERLCSK*QHFQSG
Trigger: CCCCGACTGAAAGTGCTGGCATTTGGAGCAAAGCCG...CTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTGGGTATGCCCTACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp AAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTGGATATCAGGGCAAGTaGCCAGTCCAAGAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: KDSHEELPPSTRCSLGWSGYQGK*PVQESH
Trigger: GTGGCTTTCTTGGACTGGGCACTTGCCCTGATATCC...AGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR GCA 90 bp TTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTGGCTAGAAGGCAGGGCCTACTaGTGGGATATCAGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: FPMRCYILLEAPFLLLWLEGRAY*WDIRAS
Trigger: ACTTGCCCTGATATCCCAGCAGTAGGCCCTGCCTTC...TAGCCACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp ACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCATGGATGGTCTACCCATaGAGAAATCAGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TFYPLQSWMVYPCRNQWPWMVYP*RNQWPG
Trigger: TCCTGGCCACTGATTTCTGCATGGGTAGACCATCCA...TGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR GCA 90 bp TTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTGGCTACCACCTTCTACCCGCTaGAGTCTTGGATGGTCTACC +
Preference number: 4 (lower is better)
Translates to: FPMRCYILLEAPFLLLWLPPSTR*SLGWST
Trigger: GGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGG...TAGCCACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp AGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATACTCCCATGAAGAACTaGCACCTTCTACCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: RTATFYPLQSWMVYPCRNTPMKN*HLLPAA
Trigger: TGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGT...ATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR GCA 90 bp AGCGGAGTAGCTGATTCACGGAATCGGGGAGCTGGATCTGTAGCCTCTGAGAGAGCTGCTGTTTCCCAATaGGGTGCTATATTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SGVADSRNRGAGSVASERAAVSQ*GAIFFW
Trigger: CCAGAAGAATATAGCACCGCATTGGGAAACAGCAGC...TCTCTCAGAGGCTACAGATCCAGCTCCCCGATTCCGTGAATCAGCTACTCCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR GCA 90 bp TCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAACAACTGCCTGTGCTCTaGTCTACAGATGATAGGAGG +
Preference number: 4 (lower is better)
Translates to: STRCSLGWSTHAEISGQEQLPVL*STDDRR
Trigger: CCTCCTATCATCTGTAGAGCAGAGCACAGGCAGTTG...TTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCACAACTGCCTGTGCTCTaGTCTACAGATGATAGGAGG +
Preference number: 4 (lower is better)
Translates to: QEPYTESCLRLMEGSLGPQLPVL*STDDRR
Trigger: CCTCCTATCATCTGTAGAGCAGAGCACAGGCAGTTG...TGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTCCCAAGGCACACAACTaGCTGTGCTCTGCTCTACAG +
Preference number: 4 (lower is better)
Translates to: AVSQCGAIFFWKPLSFCCPKAHN*LCSALQ
Trigger: CTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGG...ACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp ACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGCATAAAGGGTGCTTGTaGTCTGGATTGCAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: TATFYPLQSWMVYPCRNQHKGCL*SGLQGS
Trigger: TGACCCCTGCAATCCAGACCACAAGCACCCTTTATG...CTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp ACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGGCTTCTGGTTTTGGTTaGGAGGAGTTGCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: TATFYPLQSWMVYPCRNQASGFG*EELPPS
Trigger: AGAAGGTGGCAACTCCTCCCAACCAAAACCAGAAGC...CTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp ATGGGGAATGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACAGGGAGGGGCTTCTGGTTTTGGTTaGGAGGAGTTGCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: MGNGKLEEVGLQGRGQGGASGFG*EELPPS
Trigger: AGAAGGTGGCAACTCCTCCCAACCAAAACCAGAAGC...CCCTCCCTGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTGCCCTGCTTCTGGTTTTaGTTGGGAGGAGTTGCCACC +
Preference number: 4 (lower is better)
Translates to: LFPNAVLYSSGSPFPSAVPCFWF*LGGVAT
Trigger: GGTGGCAACTCCTCCCAACCAAAACCAGAAGCAGGG...CACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CCAAAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACCCAGAGAACACACTCTaGCTCTTGTCCAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PKMEELRWRQLATCLGENPENTL*LLSSSF
Trigger: GAAGGAACTGGACAAGAGCCAGAGTGTGTTCTCTGG...GTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp GGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCCCAGAGAACACACTCTaGCTCTTGTCCAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: GEAAVSQCGAIFFWKPLSPENTL*LLSSSF
Trigger: GAAGGAACTGGACAAGAGCCAGAGTGTGTTCTCTGG...GGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGGGTCCTTCAACCATATaGATGGGTTTCCAGAGAACA +
Preference number: 4 (lower is better)
Translates to: AAVLDGLPMQKSVARKAGGPSTI*MGFQRT
Trigger: TGTTCTCTGGAAACCCATCCATATGGTTGAAGGACC...CCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp ATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGTATGCTGGCTCAGCGTaGGTTCACTTAGAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: MKNCHLLPAAVLDGLPMQYAGSA*VHLEEL
Trigger: AAGCTCCTCTAAGTGAACCCACGCTGAGCCAGCATA...CTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp TTTCCTTCTGCTGTGGCTAGAGCTGTGACCAAGAATGGGAACAGGAGGCTGCTAGCTTGTCTTGCAGGATaGCCTGGATACAGATGCGGT +
Preference number: 4 (lower is better)
Translates to: FPSAVARAVTKNGNRRLLACLAG*PGYRCG
Trigger: ACCGCATCTGTATCCAGGCCATCCTGCAAGACAAGC...TAGCAGCCTCCTGTTCCCATTCTTGGTCACAGCTCTAGCCACAGCAGAAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp TTATTCCACCTGGTAGGGCATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTTGCTGGTCGGCTCTaGTGGGACCTCAGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LFHLVGHTQEPYTESCLRFAGRL*WDLSSS
Trigger: GGAACTGCTGAGGTCCCACCAGAGCCGACCAGCAAA...CCTGAGACAGGACTCAGTATATGGTTCTTGGGTATGCCCTACCAGGTGGAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
CDS-3UTR CCA 90 bp CTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGGCAAAGTCCAGAAGTaGGAAGAAGTCCTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LRHQVKKTPMKNCHLLPAGKVQK*EEVLGA
Trigger: GGCCCCAAGGACTTCTTCCCACTTCTGGACTTTGCC...AGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CCAAAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACAGTAGGTATGCAGGGTaGAATCCGGCTTTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: PKMEELRWRQLATCLGENSRYAG*NPALLQ
Trigger: TTGGAGCAAAGCCGGATTCCACCCTGCATACCTACT...GTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp GCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCTTCCTCAGCAGCTCCTaGTTGGTAAGCTTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: ATGHLPRRELRHQVKKTPFLSSS*LVSLRD
Trigger: GTCCCTCAAGCTTACCAACCAGGAGCTGCTGAGGAA...GGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
CDS-3UTR CCA 90 bp CACCTGGTAGGGCATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGCAAGAGGTGCCACAGTaGCAGCAGCACATTCTGGTG +
Preference number: 4 (lower is better)
Translates to: HLVGHTQEPYTESCLRLMQEVPQ*QQHILV
Trigger: CACCAGAATGTGCTGCTGCCACTGTGGCACCTCTTG...CATCAACCTGAGACAGGACTCAGTATATGGTTCTTGGGTATGCCCTACCAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
CDS-3UTR CCA 90 bp CAAGACCCCCAGCATGATGGGGAATGGAAAGTTGGAAGAAGTAGGACTACAAGGCAAGAGGTGCCACAGTaGCAGCAGCACATTCTGGTG +
Preference number: 4 (lower is better)
Translates to: QDPQHDGEWKVGRSRTTRQEVPQ*QQHILV
Trigger: CACCAGAATGTGCTGCTGCCACTGTGGCACCTCTTG...CCTTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCATCATGCTGGGGGTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp AGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACCTCTGCATGCCTCATaGCAGTGCTCCTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RELRHQVKKTPMKNCHLLPLHAS*QCSWAQ
Trigger: CTGGGCCCAGGAGCACTGCCATGAGGCATGCAGAGG...TAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR CCA 90 bp ATGGGGAATGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACAGGGAGGGCGCTGCAGTCTTGGATaGTCTACCCATGCAGAAATC +
Preference number: 4 (lower is better)
Translates to: MGNGKLEEVGLQGRGQGGRCSLG*STHAEI
Trigger: GATTTCTGCATGGGTAGACCATCCAAGACTGCAGCG...CCCTCCCTGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp TCCAAGAAAGCCACTGTAATGTCCTGTAGGCAAAGCCAGGTCCAGTGGACAGCCCGCTGCAGTCTTGGATaGTCTACCCATGCAGAAATC +
Preference number: 4 (lower is better)
Translates to: SKKATVMSCRQSQVQWTARCSLG*STHAEI
Trigger: GATTTCTGCATGGGTAGACCATCCAAGACTGCAGCG...GGCTGTCCACTGGACCTGGCTTTGCCTACAGGACATTACAGTGGCTTTCTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
CDS-3UTR CCA 90 bp AAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCATACCCGCTGCAGTCTTaGATGGTCTACCCATGCAGA +
Preference number: 4 (lower is better)
Translates to: KMEELRWRQLATCLGENSYPLQS*MVYPCR
Trigger: TCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTA...TGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
CDS-3UTR CCA 90 bp CATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGGCTTAGAGGCATTTaGGGCAGGCTGGGCATTTTG +
Preference number: 4 (lower is better)
Translates to: HTQEPYTESCLRLMEGSLGLRGI*GRLGIL
Trigger: CAAAATGCCCAGCCTGCCCCAAATGCCTCTAAGCCC...CAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTGGGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp TGTGACCAAGAATGGGAACAGGAGGCTGCTAAAGTCTGGAGAAGCAGGAATCATTTGGCAAAACCTGCTTaGCCCAGGGCCCACATGATG +
Preference number: 4 (lower is better)
Translates to: CDQEWEQEAAKVWRSRNHLAKPA*PRAHMM
Trigger: CATCATGTGGGCCCTGGGTCAAGCAGGTTTTGCCAA...ATGATTCCTGCTTCTCCAGACTTTAGCAGCCTCCTGTTCCCATTCTTGGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR TCA 90 bp CTGCTAAAGTCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGACTGTGGCATTGGTGTaGGCCCAGGCCAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: LLKSRRELRHQVKKTPMKTVALV*AQASCK
Trigger: CTTGCAGCTGGCCTGGGCTCACACCAATGCCACAGT...CTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGACTTTAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321326.11
ENST00000435172.6
CDS-3UTR TCA 90 bp CTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTTGGATCTGTAGCCTCTaGGAGAGACTGGTGAGACTG +
Preference number: 4 (lower is better)
Translates to: LRHQVKKTPMKNCHLLPAWICSL*ERLVRL
Trigger: CAGTCTCACCAGTCTCTCTCAGAGGCTACAGATCCA...AGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR TCA 90 bp CAAGACCCCCAGCATGATGGGGAATGGAAAGTTGGAAGAAGTAGGACTACAAGGTGGATCTGTAGCCTCTaGGAGAGACTGGTGAGACTG +
Preference number: 4 (lower is better)
Translates to: QDPQHDGEWKVGRSRTTRWICSL*ERLVRL
Trigger: CAGTCTCACCAGTCTCTCTCAGAGGCTACAGATCCA...CCTTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCATCATGCTGGGGGTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp TTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTGGCTAAGTGGACAGCCTCACTaGGCTGTGTCTTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: FPMRCYILLEAPFLLLWLSGQPH*AVSSCS
Trigger: ACTGCATGAAGACACAGCTCAGTGAGGCTGTCCACT...TAGCCACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp GCTAGAGCTGTGACCAAGAATGGGAACAGGAGGCTGCTAAAGTCTAGGAGAGAAAGTGGACAGCCTCACTaGGCTGTGTCTTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: ARAVTKNGNRRLLKSRRESGQPH*AVSSCS
Trigger: ACTGCATGAAGACACAGCTCAGTGAGGCTGTCCACT...TTCTCTCCTAGACTTTAGCAGCCTCCTGTTCCCATTCTTGGTCACAGCTCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321326.11
ENST00000435172.6
CDS-3UTR TCA 90 bp TGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTGGAAGAAGTAGGACTCAAAGATGGAAGAACTaGGGTGGAGGCAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: CDQDPQHDGEWKVGRSRTQRWKN*GGGNWP
Trigger: TGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTG...AGTCCTACTTCTTCCAACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR TCA 90 bp AGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTCTGGGCATTTTGAAGTaGGAGGCATTTCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: REAEPCDQDPQHDGEWKVLGILK*EAFPSS
Trigger: GCTGGATGGAAATGCCTCTCACTTCAAAATGCCCAG...AACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp AAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTAGCAGGCTGGGCATTTTaGAGTGAGAGGCATTTCCAT +
Preference number: 4 (lower is better)
Translates to: KTPMKNCHLLPAAVLDGLAGWAF*SERHFH
Trigger: ATGGAAATGCCTCTCACTTCAAAATGCCCAGCCTGC...TAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTGCTTGTGGTCTGGATTaGAGGGGTCAGGTCGTATTT +
Preference number: 4 (lower is better)
Translates to: VRLLFPNAVLYSSGSPFPACGLD*RGQVVF
Trigger: AAATACGACCTGACCCCTGCAATCCAGACCACAAGC...AGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GATGGACAGTGGAGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGACCTGCTCCTTATTCTaGCGCTTCATGATATTCTCA +
Preference number: 4 (lower is better)
Translates to: DGQWREAEPCDQDPQHDGTCSLF*RFMIFS
Trigger: TGAGAATATCATGAAGCGGCAGAATAAGGAGCAGGT...CCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCTCCACTGTCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GAGGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTGCCACCTTCTTTGGCTaGTTCTTGTTCCCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: EVRLLFPNAVLYSSGSPFATFFG*FLFPGF
Trigger: GAAACCAGGGAACAAGAAGCAGCCAAAGAAGGTGGC...AAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTATCCAGAGCTTTCAGTaGTTCCTCCAGGCTGCGGAA +
Preference number: 4 (lower is better)
Translates to: AVSQCGAIFFWKPLSFCCIQSFQ*FLQAAE
Trigger: TTCCGCAGCCTGGAGGAAGCACTGAAAGCTCTGGAT...ACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp TACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGGTCTTATCCAGCTCTTaGAACATGGTGAACAGACAG +
Preference number: 4 (lower is better)
Translates to: YPLQSWMVYPCRNQWPGRVLSSS*NMVNRQ
Trigger: CTGTCTGTTCACCATGTTGCAAGAGCTGGATAAGAC...CCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000435172.6
CDS-3UTR GCA 90 bp AAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTAGGTGGAATCCGGCTTTaGTCCAAATGCCAGCACTTT +
Preference number: 4 (lower is better)
Translates to: KTPMKNCHLLPAAVLDGLGGIRL*SKCQHF
Trigger: AAAGTGCTGGCATTTGGAGCAAAGCCGGATTCCACC...TAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp AGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGGCACTCAGTCAGGCTaGTCAGGAGCTCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: RLLFPNAVLYSSGSPFPSGTQSG*SGALSS
Trigger: TGAAGAAAGAGCTCCTGAGCAGCCTGACTGAGTGCC...AGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
CDS-3UTR GCA 90 bp ACCAAAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACATCCTGGTTGTTACTaGTACCCTTCCTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: TKDGRTEVEATGHLPRREHPGCY*YPSSAA
Trigger: AGCTGCTGAGGAAGGGTAGCAGTAACAACCAGGATG...TTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
CDS-3UTR GCA 90 bp GAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACCCAGGTCACCTCACCTCTaGATGCCTCATGGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: ELRHQVKKTPMKNCHLLPRSPHL*MPHGSA
Trigger: AGCACTGCCATGAGGCATGCAGAGGTGAGGTGACCT...GGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR GCA 90 bp TTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTGGCTAGGATATCAGGGCAAGTaGCCAGTCCAAGAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: FPMRCYILLEAPFLLLWLGYQGK*PVQESH
Trigger: GTGGCTTTCTTGGACTGGGCACTTGCCCTGATATCC...TAGCCACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGACTCCCATGAAGAACTaGCACCTTCTACCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: HTQEPYTESCLRLMEGSLTPMKN*HLLPAA
Trigger: TGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGT...CAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTGGGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CAGTGGAGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAACACAGAAGCCACCTaGTGGGAGTTCTATCTTTTT +
Preference number: 4 (lower is better)
Translates to: QWREAEPCDQDPQHDGEWNTEAT*WEFYLF
Trigger: AAAAAGATAGAACTCCCAGCAGGTGGCTTCTGTGTT...CCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCTCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp TCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTGCTGGGATATCTGTTTCCCAATGCGGTaGTATATTCTTCTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: STHAEISGQEGRAYCWDICFPMR*YILLEA
Trigger: GGCTTCCAGAAGAATATAGCACCGCATTGGGAAACA...GATATCCCAGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR GCA 90 bp AAAGCCACTGTAATGTCCTGTAGGCAAAGCCAGGTCCAGTGGACAGCCTCACTGGCACACAACTGCCTGTaGTCTGCTCTACAGATGATA +
Preference number: 4 (lower is better)
Translates to: KATVMSCRQSQVQWTASLAHNCL*SALQMI
Trigger: TATCATCTGTAGAGCAGAGCACAGGCAGTTGTGTGC...CAGTGAGGCTGTCCACTGGACCTGGCTTTGCCTACAGGACATTACAGTGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR CCA 90 bp AGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGTTAAAACATAAAGGGTGCTTGTaGTCTGGATTGCAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: RWRQLATCLGENSGTKLKHKGCL*SGLQGS
Trigger: TGACCCCTGCAATCCAGACCACAAGCACCCTTTATG...TTTTAACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp TGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACAGGGAGGGGCTTAGAGCTGCTTCTTGTTCCCTaGTTTCTTAGGTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: WKVGRSRTTREGTGRGLELLLVP*FLRFHS
Trigger: GCTGTGGAACCTAAGAAACCAGGGAACAAGAAGCAG...CTCTAAGCCCCTCCCTGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACCCCCCTGCTTCTGGTTTTaGTTGGGAGGAGTTGCCACC +
Preference number: 4 (lower is better)
Translates to: ELRHQVKKTPMKNCHLLPPCFWF*LGGVAT
Trigger: GGTGGCAACTCCTCCCAACCAAAACCAGAAGCAGGG...GGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp AAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTCCAGAGAACACACTCTaGCTCTTGTCCAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: KDSHEELPPSTRCSLGWSPENTL*LLSSSF
Trigger: GAAGGAACTGGACAAGAGCCAGAGTGTGTTCTCTGG...AGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CAGTGGAGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGCTTCAACCATATGGATaGGTTTCCAGAGAACACACT +
Preference number: 4 (lower is better)
Translates to: QWREAEPCDQDPQHDGEWLQPYG*VSREHT
Trigger: AGTGTGTTCTCTGGAAACCCATCCATATGGTTGAAG...CCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCTCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp AACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCATGCCTAGGTTTGCCGTaGCAATCTTGGGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: NCHLLPAAVLDGLPMQKSCLGLP*QSWACL
Trigger: AAGACAAGCCCAAGATTGCCACGGCAAACCTAGGCA...TGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp AAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTATGCCTAGGTTTGCCGTaGCAATCTTGGGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: KTPMKNCHLLPAAVLDGLCLGLP*QSWACL
Trigger: AAGACAAGCCCAAGATTGCCACGGCAAACCTAGGCA...TAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp AAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACAGGTGACGACATCCTaGTTGTTACTGCTACCCTTC +
Preference number: 4 (lower is better)
Translates to: KTPMKNCHLLPAAVLDGLQVTTS*LLLLPF
Trigger: GAAGGGTAGCAGTAACAACCAGGATGTCGTCACCTG...TAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR CCA 90 bp TTTCCTTCTGCTGTGGCTAGAGCTGTGACCAAGAATGGGAACAGGAGGCTGCTACAGGTGACGACATCCTaGTTGTTACTGCTACCCTTC +
Preference number: 4 (lower is better)
Translates to: FPSAVARAVTKNGNRRLLQVTTS*LLLLPF
Trigger: GAAGGGTAGCAGTAACAACCAGGATGTCGTCACCTG...TAGCAGCCTCCTGTTCCCATTCTTGGTCACAGCTCTAGCCACAGCAGAAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GAGGCTGCTAAAGTCTGGAGAAGCAGGAATCATTTGTCAGAAGAACACAGAAGCTGTGACCGGAGGTCATaGCACAGGAAGCCTACAGCG +
Preference number: 4 (lower is better)
Translates to: EAAKVWRSRNHLSEEHRSCDRRS*HRKPTA
Trigger: CGCTGTAGGCTTCCTGTGCCATGACCTCCGGTCACA...GCTTCTGTGTTCTTCTGACAAATGATTCCTGCTTCTCCAGACTTTAGCAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp AAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATTGGCACACGCTTGTTaGCTAGCAGGTAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: KNCHLLPAAVLDGLPMQKLAHAC*LAGKKP
Trigger: TGGCTTCTTACCTGCTAGCCAACAAGCGTGTGCCAA...TTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CTGGTAGGGCATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGTACCCGCTGCAGTCTTaGATGGTCTACCCATGCAGA +
Preference number: 4 (lower is better)
Translates to: LVGHTQEPYTESCLRLMEYPLQS*MVYPCR
Trigger: TCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTA...CTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTGGGTATGCCCTACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp TTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGATGATAGGAGAGGCTGCTAAAGTCTaGAGAAGCAGGAATCATTTG +
Preference number: 4 (lower is better)
Translates to: FPGPKAHNCLCSALQMIGEAAKV*RSRNHL
Trigger: CAAATGATTCCTGCTTCTCCAGACTTTAGCAGCCTC...TCCTATCATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp GGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCGGTGCTATATTCTTCTaGAAGCCCCTTTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GEAAVSQCGAIFFWKPLSGAIFF*KPLSFC
Trigger: GCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACC...GGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GCTGTGGCTAGAGCTGTGACCAAGAATGGGAACAGGAGGCTGCTAAAGTCTGGAGGTGCTATATTCTTCTaGAAGCCCCTTTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: AVARAVTKNGNRRLLKSGGAIFF*KPLSFC
Trigger: GCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACC...TCCAGACTTTAGCAGCCTCCTGTTCCCATTCTTGGTCACAGCTCTAGCCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp CTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGCAGCATGATGGGGAATaGAAAGTTGGAAGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: LPAAVLDGLPMQKSVARKQHDGE*KVGRSR
Trigger: CCTACTTCTTCCAACTTTCCATTCCCCATCATGCTG...CTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp ATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCCAGCATGATGGGGAATaGAAAGTTGGAAGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: MEELRWRQLATCLGENSGQHDGE*KVGRSR
Trigger: CCTACTTCTTCCAACTTTCCATTCCCCATCATGCTG...GCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR TCA 90 bp TCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACTTGGCAAAACCTGCTTaGCCCAGGGCCCACATGATG +
Preference number: 4 (lower is better)
Translates to: SRRELRHQVKKTPMKNCHLAKPA*PRAHMM
Trigger: CATCATGTGGGCCCTGGGTCAAGCAGGTTTTGCCAA...GTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321326.11
ENST00000435172.6
CDS-3UTR TCA 90 bp TTATTCCACCTGGTAGGGCATACCCAAGAACCATATACTGAGTCCTGTCTCAGGCTTTCAGTCCCTCGGTaGGGTTGGCAAAACCTGCTT +
Preference number: 4 (lower is better)
Translates to: LFHLVGHTQEPYTESCLRLSVPR*GWQNLL
Trigger: AAGCAGGTTTTGCCAACCTCACCGAGGGACTGAAAG...CCTGAGACAGGACTCAGTATATGGTTCTTGGGTATGCCCTACCAGGTGGAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
CDS-3UTR TCA 90 bp TCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGTAAGCTTGAGGGACTaGATGGTTTCTTGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: STRCSLGWSTHAEISGQEVSLRD*MVSCKD
Trigger: GTCTTTGCAAGAAACCATTCAGTCCCTCAAGCTTAC...TTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR TCA 90 bp AGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAATTAAAAAGACTCCCATaGAGAACTGCCACCTTCTAC +
Preference number: 4 (lower is better)
Translates to: RTEVEATGHLPRRELRHQLKRLP*RTATFY
Trigger: GTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAA...TTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
CDS-3UTR TCA 90 bp GTGGAGGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTAAAAAGACTCCCATaGAGAACTGCCACCTTCTAC +
Preference number: 4 (lower is better)
Translates to: VEVRLLFPNAVLYSSGSPLKRLP*RTATFY
Trigger: GTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAA...GGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACCTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp TGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACAGGGAGGGGCTTAGAGCCAAGAACCATATACTaGGTCCTGTCTCAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: WKVGRSRTTREGTGRGLEPRTIY*VLSQVD
Trigger: ATCAACCTGAGACAGGACTCAGTATATGGTTCTTGG...CTCTAAGCCCCTCCCTGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGCTTGTGGTCTGGATTaGAGGGGTCAGGTCGTATTT +
Preference number: 4 (lower is better)
Translates to: HTQEPYTESCLRLMEGSLACGLD*RGQVVF
Trigger: AAATACGACCTGACCCCTGCAATCCAGACCACAAGC...CAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTGGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp TTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTGGCTAGCTTGTGGTCTGGATTaGAGGGGTCAGGTCGTATTT +
Preference number: 4 (lower is better)
Translates to: FPMRCYILLEAPFLLLWLACGLD*RGQVVF
Trigger: AAATACGACCTGACCCCTGCAATCCAGACCACAAGC...TAGCCACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CAAGACCCCCAGCATGATGGGGAATGGAAAGTTGGAAGAAGTAGGACTACAAGGTTCCTTCTGCAGGTCTaGCACATCCAGAGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: QDPQHDGEWKVGRSRTTRFLLQV*HIQSFQ
Trigger: CTGAAAGCTCTGGATGTGGCAGACCTGCAGAAGGAA...CCTTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCATCATGCTGGGGGTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTTTCCTTCTGCAGGTCTaGCACATCCAGAGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: LRHQVKKTPMKNCHLLPAFLLQV*HIQSFQ
Trigger: CTGAAAGCTCTGGATGTGGCAGACCTGCAGAAGGAA...AGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTTTGTCCAGTTCCTTCTaGAGGTCTGCCACATCCAGA +
Preference number: 4 (lower is better)
Translates to: LRHQVKKTPMKNCHLLPALSSSF*RSATSR
Trigger: TCTGGATGTGGCAGACCTGCAGAAGGAACTGGACAA...AGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTTTGTCCAGTTCCTTCTaGAGGTCTGCCACATCCAGA +
Preference number: 4 (lower is better)
Translates to: AVSQCGAIFFWKPLSFCCLSSSF*RSATSR
Trigger: TCTGGATGTGGCAGACCTGCAGAAGGAACTGGACAA...ACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp ACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGGTCTTATCCAGCTCTTaGAACATGGTGAACAGACAG +
Preference number: 4 (lower is better)
Translates to: TATFYPLQSWMVYPCRNQVLSSS*NMVNRQ
Trigger: CTGTCTGTTCACCATGTTGCAAGAGCTGGATAAGAC...CTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000435172.6
CDS-3UTR GCA 90 bp TGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTGGAAGAAGTAGGACTATCTTGGGCTTGTCTTaGAGGATGGCCTGGATACAG +
Preference number: 4 (lower is better)
Translates to: CDQDPQHDGEWKVGRSRTILGLS*RMAWIQ
Trigger: CTGTATCCAGGCCATCCTGCAAGACAAGCCCAAGAT...AGTCCTACTTCTTCCAACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp AGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTATCTTGGGCTTGTCTTaGAGGATGGCCTGGATACAG +
Preference number: 4 (lower is better)
Translates to: RLLFPNAVLYSSGSPFPSILGLS*RMAWIQ
Trigger: CTGTATCCAGGCCATCCTGCAAGACAAGCCCAAGAT...AGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp TTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTGGCTACATCCTGGTTGTTACTaGTACCCTTCCTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: FPMRCYILLEAPFLLLWLHPGCY*YPSSAA
Trigger: AGCTGCTGAGGAAGGGTAGCAGTAACAACCAGGATG...TAGCCACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp GTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGATATCAGGGCAAGTaGCCAGTCCAAGAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: VKKTPMKNCHLLPAAVLDGYQGK*PVQESH
Trigger: GTGGCTTTCTTGGACTGGGCACTTGCCCTGATATCC...ATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR GCA 90 bp GAGGCTGCTAAAGTCTGGAGAAGCAGGAATCATTTGTCAGAAGAACACAGAAGCAGGCAACTGGCCACTTaGCTAGGAGAGAACTCAGGC +
Preference number: 4 (lower is better)
Translates to: EAAKVWRSRNHLSEEHRSRQLAT*LGENSG
Trigger: GCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCT...GCTTCTGTGTTCTTCTGACAAATGATTCCTGCTTCTCCAGACTTTAGCAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp GCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCGCTGCTGTTTCCCAATaGGGTGCTATATTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ATGHLPRRELRHQVKKTPAAVSQ*GAIFFW
Trigger: CCAGAAGAATATAGCACCGCATTGGGAAACAGCAGC...GGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp GGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGGCTGCTGTTTCCCAATaGGGTGCTATATTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GCCFPMRCYILLEAPFLLAAVSQ*GAIFFW
Trigger: CCAGAAGAATATAGCACCGCATTGGGAAACAGCAGC...CAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp AACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGCTGCTGTTTCCCAATaGGGTGCTATATTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: NCHLLPAAVLDGLPMQKSAAVSQ*GAIFFW
Trigger: CCAGAAGAATATAGCACCGCATTGGGAAACAGCAGC...TGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp AGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTCAACTGCCTGTGCTCTaGTCTACAGATGATAGGAGG +
Preference number: 4 (lower is better)
Translates to: RLLFPNAVLYSSGSPFPSQLPVL*STDDRR
Trigger: CCTCCTATCATCTGTAGAGCAGAGCACAGGCAGTTG...AGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GAGGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCTGCTTCTTGTTCCCTaGTTTCTTAGGTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: EVRLLFPNAVLYSSGSPFLLLVP*FLRFHS
Trigger: GCTGTGGAACCTAAGAAACCAGGGAACAAGAAGCAG...AAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp ACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGTCCTTCAACCATATaGATGGGTTTCCAGAGAACA +
Preference number: 4 (lower is better)
Translates to: TFYPLQSWMVYPCRNQWPGPSTI*MGFQRT
Trigger: TGTTCTCTGGAAACCCATCCATATGGTTGAAGGACC...TGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp TGTGACCAAGAATGGGAACAGGAGGCTGCTAAAGTCTGGAGAAGCAGGAATCATGCTTGTCTTGCAGGATaGCCTGGATACAGATGCGGT +
Preference number: 4 (lower is better)
Translates to: CDQEWEQEAAKVWRSRNHACLAG*PGYRCG
Trigger: ACCGCATCTGTATCCAGGCCATCCTGCAAGACAAGC...ATGATTCCTGCTTCTCCAGACTTTAGCAGCCTCCTGTTCCCATTCTTGGTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp GTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATTTGCCGTGGCAATCTTaGGCTTGTCTTGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: VKKTPMKNCHLLPAAVLDLPWQS*ACLAGW
Trigger: CCATCCTGCAAGACAAGCCCAAGATTGCCACGGCAA...ATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GCTAGAGCTGTGACCAAGAATGGGAACAGGAGGCTGCTAAAGTCTAGGAGAGAAAGTAGGTATGCAGGGTaGAATCCGGCTTTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: ARAVTKNGNRRLLKSRRESRYAG*NPALLQ
Trigger: TTGGAGCAAAGCCGGATTCCACCCTGCATACCTACT...TTCTCTCCTAGACTTTAGCAGCCTCCTGTTCCCATTCTTGGTCACAGCTCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321326.11
ENST00000435172.6
CDS-3UTR CCA 90 bp GCTAGAGCTGTGACCAAGAATGGGAACAGGAGGCTGCTAAAGTCTAGGAGAGAACAGGTGACGACATCCTaGTTGTTACTGCTACCCTTC +
Preference number: 4 (lower is better)
Translates to: ARAVTKNGNRRLLKSRREQVTTS*LLLLPF
Trigger: GAAGGGTAGCAGTAACAACCAGGATGTCGTCACCTG...TTCTCTCCTAGACTTTAGCAGCCTCCTGTTCCCATTCTTGGTCACAGCTCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321326.11
ENST00000435172.6
CDS-3UTR CCA 90 bp CTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTTTGGCACACGCTTGTTaGCTAGCAGGTAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LRHQVKKTPMKNCHLLPALAHAC*LAGKKP
Trigger: TGGCTTCTTACCTGCTAGCCAACAAGCGTGTGCCAA...AGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp AGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTCGCTGCAGTCTTGGATaGTCTACCCATGCAGAAATC +
Preference number: 4 (lower is better)
Translates to: RLLFPNAVLYSSGSPFPSRCSLG*STHAEI
Trigger: GATTTCTGCATGGGTAGACCATCCAAGACTGCAGCG...AGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTGCGCTGCAGTCTTGGATaGTCTACCCATGCAGAAATC +
Preference number: 4 (lower is better)
Translates to: LFPNAVLYSSGSPFPSAVRCSLG*STHAEI
Trigger: GATTTCTGCATGGGTAGACCATCCAAGACTGCAGCG...CACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp CAGCATGATGGGGAATGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACACGCTGCAGTCTTGGATaGTCTACCCATGCAGAAATC +
Preference number: 4 (lower is better)
Translates to: QHDGEWKVGRSRTTREGTRCSLG*STHAEI
Trigger: GATTTCTGCATGGGTAGACCATCCAAGACTGCAGCG...TGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCATCATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp AGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAACAGAAGCCACCTGCTaGGAGTTCTATCTTTTTAGA +
Preference number: 4 (lower is better)
Translates to: RTEVEATGHLPRRELRHQTEATC*EFYLFR
Trigger: TCTAAAAAGATAGAACTCCCAGCAGGTGGCTTCTGT...TTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
3UTR CAA 72 bp CAGGAGGCTGCTAAAGTCTGGAGAAGCAGGAATCATTaGTCAGAAGAACACAGAAGCCACCTGCTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: QEAAKVWRSRNH*SEEHRSHLLGV
Trigger: AACTCCCAGCAGGTGGCTTCTGTGTTCTTCTGACAAATGATTCCTGCTTCTCCAGACTTTAGCAGCCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR TCA 90 bp GCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCGTAAGCTTGAGGGACTaGATGGTTTCTTGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: ATGHLPRRELRHQVKKTPVSLRD*MVSCKD
Trigger: GTCTTTGCAAGAAACCATTCAGTCCCTCAAGCTTAC...GGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
CDS-3UTR TCA 90 bp GAGGCTGCTAAAGTCTGGAGAAGCAGGAATCATTTGTCAGAAGAACACAGAAGCCAAAGATGGAAGAACTaGGGTGGAGGCAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: EAAKVWRSRNHLSEEHRSQRWKN*GGGNWP
Trigger: TGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTG...GCTTCTGTGTTCTTCTGACAAATGATTCCTGCTTCTCCAGACTTTAGCAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp ATGGGGAATGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACAGGGAGGGACCTGCTCCTTATTCTaGCGCTTCATGATATTCTCA +
Preference number: 4 (lower is better)
Translates to: MGNGKLEEVGLQGRGQGGTCSLF*RFMIFS
Trigger: TGAGAATATCATGAAGCGGCAGAATAAGGAGCAGGT...CCCTCCCTGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp AGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACGGCTTTGCTCCAAATaGCAGCACTTTCAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: RELRHQVKKTPMKNCHLLRLCSK*QHFQSG
Trigger: CCCCGACTGAAAGTGCTGGCATTTGGAGCAAAGCCG...TAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp CCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACCATCCTGGTTGTTACTaGTACCCTTCCTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PRRELRHQVKKTPMKNCHHPGCY*YPSSAA
Trigger: AGCTGCTGAGGAAGGGTAGCAGTAACAACCAGGATG...GTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
CDS-3UTR GCA 90 bp AAGTCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCAGGTCACCTCACCTCTaGATGCCTCATGGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: KSRRELRHQVKKTPMKNCRSPHL*MPHGSA
Trigger: AGCACTGCCATGAGGCATGCAGAGGTGAGGTGACCT...GCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321326.11
ENST00000435172.6
CDS-3UTR GCA 90 bp CCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACTGGATGGTCTACCCATaGAGAAATCAGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PRRELRHQVKKTPMKNCHWMVYP*RNQWPG
Trigger: TCCTGGCCACTGATTTCTGCATGGGTAGACCATCCA...GTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
CDS-3UTR GCA 90 bp GAGGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTTGTTTCCCAATGCGGTaGTATATTCTTCTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: EVRLLFPNAVLYSSGSPFCFPMR*YILLEA
Trigger: GGCTTCCAGAAGAATATAGCACCGCATTGGGAAACA...AAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp GTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGCTTCTGGTTTTGGTTaGGAGGAGTTGCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: VKKTPMKNCHLLPAAVLDASGFG*EELPPS
Trigger: AGAAGGTGGCAACTCCTCCCAACCAAAACCAGAAGC...ATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp TGTGACCAAGAATGGGAACAGGAGGCTGCTAAAGTCTGGAGAAGCAGGAATCATGCTTCTGGTTTTGGTTaGGAGGAGTTGCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: CDQEWEQEAAKVWRSRNHASGFG*EELPPS
Trigger: AGAAGGTGGCAACTCCTCCCAACCAAAACCAGAAGC...ATGATTCCTGCTTCTCCAGACTTTAGCAGCCTCCTGTTCCCATTCTTGGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp GGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGGGTCCTTCAACCATATaGATGGGTTTCCAGAGAACA +
Preference number: 4 (lower is better)
Translates to: GCCFPMRCYILLEAPFLLGPSTI*MGFQRT
Trigger: TGTTCTCTGGAAACCCATCCATATGGTTGAAGGACC...CAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp TCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAACAGAAGCCACCTGCTaGGAGTTCTATCTTTTTAGA +
Preference number: 4 (lower is better)
Translates to: STRCSLGWSTHAEISGQETEATC*EFYLFR
Trigger: TCTAAAAAGATAGAACTCCCAGCAGGTGGCTTCTGT...TTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp AGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGGTGCTATATTCTTCTaGAAGCCCCTTTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: RLLFPNAVLYSSGSPFPSGAIFF*KPLSFC
Trigger: GCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACC...AGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR CAA 72 bp AAAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTaGCCTAGGAGAGAACTCAGGCACCAAGTTAAAAAG +
Preference number: 4 (lower is better)
Translates to: KDGRTEVEATGH*PRRELRHQVKK
Trigger: CTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000404032.7
ENST00000434544.1
CDS-3UTR TCA 90 bp CAGCATGATGGGGAATGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACAGTAAGCTTGAGGGACTaGATGGTTTCTTGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: QHDGEWKVGRSRTTREGTVSLRD*MVSCKD
Trigger: GTCTTTGCAAGAAACCATTCAGTCCCTCAAGCTTAC...TGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCATCATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR TCA 90 bp AGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACTGTGGCTAGAGCTGTaGCCAAGAATGGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: RELRHQVKKTPMKNCHLLLWLEL*PRMGTG
Trigger: TCCTGTTCCCATTCTTGGTCACAGCTCTAGCCACAG...TAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp AGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGTTAAAAACCTGCTCCTTATTCTaGCGCTTCATGATATTCTCA +
Preference number: 4 (lower is better)
Translates to: RWRQLATCLGENSGTKLKTCSLF*RFMIFS
Trigger: TGAGAATATCATGAAGCGGCAGAATAAGGAGCAGGT...TTTTAACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp TCAAATCTGTGTCCTTTATTCCACCTGGTAGGGCATACCCAAGAACCATATACTAGGTCACCTCACCTCTaGATGCCTCATGGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SNLCPLFHLVGHTQEPYTRSPHL*MPHGSA
Trigger: AGCACTGCCATGAGGCATGCAGAGGTGAGGTGACCT...AGTATATGGTTCTTGGGTATGCCCTACCAGGTGGAATAAAGGACACAGATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
CDS-3UTR GCA 90 bp GTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTAACACAGAAGCCACCTaGTGGGAGTTCTATCTTTTT +
Preference number: 4 (lower is better)
Translates to: VRLLFPNAVLYSSGSPFPNTEAT*WEFYLF
Trigger: AAAAAGATAGAACTCCCAGCAGGTGGCTTCTGTGTT...AGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp GAGGCTGCTAAAGTCTGGAGAAGCAGGAATCATTTGTCAGAAGAACACAGAAGCCAACTGCCTGTGCTCTaGTCTACAGATGATAGGAGG +
Preference number: 4 (lower is better)
Translates to: EAAKVWRSRNHLSEEHRSQLPVL*STDDRR
Trigger: CCTCCTATCATCTGTAGAGCAGAGCACAGGCAGTTG...GCTTCTGTGTTCTTCTGACAAATGATTCCTGCTTCTCCAGACTTTAGCAGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR GCA 90 bp GAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCACACAACTGCCTGTaGTCTGCTCTACAGATGATA +
Preference number: 4 (lower is better)
Translates to: ELRHQVKKTPMKNCHLLPAHNCL*SALQMI
Trigger: TATCATCTGTAGAGCAGAGCACAGGCAGTTGTGTGC...GGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp AGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTCTTCAACCATATGGATaGGTTTCCAGAGAACACACT +
Preference number: 4 (lower is better)
Translates to: REAEPCDQDPQHDGEWKVLQPYG*VSREHT
Trigger: AGTGTGTTCTCTGGAAACCCATCCATATGGTTGAAG...AACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp TGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTGGAAGAAGTAGGACTGGTCCTTCAACCATATaGATGGGTTTCCAGAGAACA +
Preference number: 4 (lower is better)
Translates to: CDQDPQHDGEWKVGRSRTGPSTI*MGFQRT
Trigger: TGTTCTCTGGAAACCCATCCATATGGTTGAAGGACC...AGTCCTACTTCTTCCAACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp AAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTGGTTTAGAAATGAGATaGAAGGAAGTGGAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: KDSHEELPPSTRCSLGWSGLEMR*KEVEGR
Trigger: TCTGCCTTCCACTTCCTTCCATCTCATTTCTAAACC...AGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp CTGGTAGGGCATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGAGGCTGCTAAAGTCTaGAGAAGCAGGAATCATTTG +
Preference number: 4 (lower is better)
Translates to: LVGHTQEPYTESCLRLMEEAAKV*RSRNHL
Trigger: CAAATGATTCCTGCTTCTCCAGACTTTAGCAGCCTC...CTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTGGGTATGCCCTACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR TCA 90 bp CATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGTTAAAAAGACTCCCATaGAGAACTGCCACCTTCTAC +
Preference number: 4 (lower is better)
Translates to: HTQEPYTESCLRLMEGSLLKRLP*RTATFY
Trigger: GTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAA...CAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTGGGTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR GCA 90 bp AGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACATCCTGGTTGTTACTaGTACCCTTCCTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RELRHQVKKTPMKNCHLLHPGCY*YPSSAA
Trigger: AGCTGCTGAGGAAGGGTAGCAGTAACAACCAGGATG...TAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR GCA 90 bp TCAAATCTGTGTCCTTTATTCCACCTGGTAGGGCATACCCAAGAACCATATACTACTCCCATGAAGAACTaGCACCTTCTACCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: SNLCPLFHLVGHTQEPYTTPMKN*HLLPAA
Trigger: TGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGT...AGTATATGGTTCTTGGGTATGCCCTACCAGGTGGAATAAAGGACACAGATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
CDS-3UTR GCA 90 bp CCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACTGTTTCCCAATGCGGTaGTATATTCTTCTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PRRELRHQVKKTPMKNCHCFPMR*YILLEA
Trigger: GGCTTCCAGAAGAATATAGCACCGCATTGGGAAACA...GTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp GAACAGGAGGCTGCTAAAGTCTGGAGAAGCAGGAATCATTTGTCAGAAGAACACCTGCTTCTTGTTCCCTaGTTTCTTAGGTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: EQEAAKVWRSRNHLSEEHLLLVP*FLRFHS
Trigger: GCTGTGGAACCTAAGAAACCAGGGAACAAGAAGCAG...GTGTTCTTCTGACAAATGATTCCTGCTTCTCCAGACTTTAGCAGCCTCCTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp CATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGCTTCAACCATATGGATaGGTTTCCAGAGAACACACT +
Preference number: 4 (lower is better)
Translates to: HTQEPYTESCLRLMEGSLLQPYG*VSREHT
Trigger: AGTGTGTTCTCTGGAAACCCATCCATATGGTTGAAG...CAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTGGGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp AGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTAAGTAGGTATGCAGGGTaGAATCCGGCTTTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: RELRHQVKKTPMKNCHLLSRYAG*NPALLQ
Trigger: TTGGAGCAAAGCCGGATTCCACCCTGCATACCTACT...TAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CCA 90 bp TCAAATCTGTGTCCTTTATTCCACCTGGTAGGGCATACCCAAGAACCATATACTATGGAAGAACTGAGGTaGAGGCAACTGGCCACTTGC +
Preference number: 4 (lower is better)
Translates to: SNLCPLFHLVGHTQEPYTMEELR*RQLATC
Trigger: GCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCAT...AGTATATGGTTCTTGGGTATGCCCTACCAGGTGGAATAAAGGACACAGATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp GCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTGGTTTAGAAATGAGATaGAAGGAAGTGGAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: AVSQCGAIFFWKPLSFCCGLEMR*KEVEGR
Trigger: TCTGCCTTCCACTTCCTTCCATCTCATTTCTAAACC...ACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp GTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATCAGCATGATGGGGAATaGAAAGTTGGAAGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: VKKTPMKNCHLLPAAVLDQHDGE*KVGRSR
Trigger: CCTACTTCTTCCAACTTTCCATTCCCCATCATGCTG...ATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
3UTR CAA 72 bp CTCCTGGTTGGTAAGCTTGAGGGACTGAATGGTTTCTaGCAAAGACTTCTGTACCTTCTTGGGAATCTGCTC +
Preference number: 4 (lower is better)
Translates to: LLVGKLEGLNGF*QRLLYLLGNLL
Trigger: GAGCAGATTCCCAAGAAGGTACAGAAGTCTTTGCAAGAAACCATTCAGTCCCTCAAGCTTACCAACCAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR TCA 90 bp GAACAGGAGGCTGCTAAAGTCTGGAGAAGCAGGAATCATTTGTCAGAAGAACACGTAAGCTTGAGGGACTaGATGGTTTCTTGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: EQEAAKVWRSRNHLSEEHVSLRD*MVSCKD
Trigger: GTCTTTGCAAGAAACCATTCAGTCCCTCAAGCTTAC...GTGTTCTTCTGACAAATGATTCCTGCTTCTCCAGACTTTAGCAGCCTCCTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR TCA 90 bp GAGGCTGCTAAAGTCTGGAGAAGCAGGAATCATTTGTCAGAAGAACACAGAAGCCCAAGAACCATATACTaGGTCCTGTCTCAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: EAAKVWRSRNHLSEEHRSPRTIY*VLSQVD
Trigger: ATCAACCTGAGACAGGACTCAGTATATGGTTCTTGG...GCTTCTGTGTTCTTCTGACAAATGATTCCTGCTTCTCCAGACTTTAGCAGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CCA 90 bp TCAAATCTGTGTCCTTTATTCCACCTGGTAGGGCATACCCAAGAACCATATACTTTGGCACACGCTTGTTaGCTAGCAGGTAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SNLCPLFHLVGHTQEPYTLAHAC*LAGKKP
Trigger: TGGCTTCTTACCTGCTAGCCAACAAGCGTGTGCCAA...AGTATATGGTTCTTGGGTATGCCCTACCAGGTGGAATAAAGGACACAGATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
CDS-3UTR TCA 90 bp CTGCTAAAGTCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGGCTCTTGCAACATGGTaGACAGACAGTGGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: LLKSRRELRHQVKKTPMKALATW*TDSGQK
Trigger: TTTTTGACCACTGTCTGTTCACCATGTTGCAAGAGC...CTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGACTTTAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321326.11
ENST00000435172.6
CDS-3UTR TCA 90 bp GAACAGGAGGCTGCTAAAGTCTGGAGAAGCAGGAATCATTTGTCAGAAGAACACTTAAAAAGACTCCCATaGAGAACTGCCACCTTCTAC +
Preference number: 4 (lower is better)
Translates to: EQEAAKVWRSRNHLSEEHLKRLP*RTATFY
Trigger: GTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAA...GTGTTCTTCTGACAAATGATTCCTGCTTCTCCAGACTTTAGCAGCCTCCTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS CCA 90 bp GCCGACCCTTCTTCACTACCTCCCACCGCCCCACGCCCGCCGTCTTaGTCGCCATGGCTCGCAGCCCTCCCTCCTCGGCCACTTCCCCGG +
Preference number: 5 (lower is better)
Translates to: ADPSSLPPTAPRPPS*SPWLAALPPRPLPR
Trigger: CCGGGGAAGTGGCCGAGGAGGGAGGGCTGCGAGCCATGGCGACCAAGACGGCGGGCGTGGGGCGGTGGGAGGTAGTGAAGAAGGGTCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000495312.1
CDS CCA 90 bp TCTTCACTACCTCCCACCGCCCCACGCCCGCCGTCTTGGTCGCCATaGCTCGCAGCCCTCCCTCCTCGGCCACTTCCCCGGCTTTCCGGT +
Preference number: 5 (lower is better)
Translates to: SSLPPTAPRPPSWSP*LAALPPRPLPRLSG
Trigger: ACCGGAAAGCCGGGGAAGTGGCCGAGGAGGGAGGGCTGCGAGCCATGGCGACCAAGACGGCGGGCGTGGGGCGGTGGGAGGTAGTGAAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000435172.6
ENST00000495312.1
CDS GCA 90 bp TGGAGGGAGGCATGCAGAGCTGCCCTTCTCCTGCTGGGCCAGGTGTaGAGGAATGCAGCTGCCGGTTGGAGCCTAGGCTCAGGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: WREACRAALLLLGQV*RNAAAGWSLGSGFR
Trigger: CCTGAAGCCTGAGCCTAGGCTCCAACCGGCAGCTGCATTCCTGCACACCTGGCCCAGCAGGAGAAGGGCAGCTCTGCATGCCTCCCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460665.1
CDS-3UTR CAA 90 bp AAGGAAGTGGAAGGCAGAGGGCAAGGGCGGAGTTGTGAGAGGCTACCAGCACAACCCACGCCCGCCGTCTaGGTCGCCATGGCTCGCAGC +
Preference number: 5 (lower is better)
Translates to: KEVEGRGQGRSCERLPAQPTPAV*VAMARS
Trigger: GCTGCGAGCCATGGCGACCAAGACGGCGGGCGTGGG...TTGTGCTGGTAGCCTCTCACAACTCCGCCCTTGCCCTCTGCCTTCCACTTCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS GCA 90 bp GGCAGAGCTTTGTGTTCTCACAGGGCCACAAAGCCAGCTCCAGGCTaGTGTGGAGGGAGGCATGCAGAGCTGCCCTTCTCCTGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: GRALCSHRATKPAPG*CGGRHAELPFSCWA
Trigger: GGCCCAGCAGGAGAAGGGCAGCTCTGCATGCCTCCCTCCACAGCAGCCTGGAGCTGGCTTTGTGGCCCTGTGAGAACACAAAGCTCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460665.1
CDS-3UTR CAA 90 bp CCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCCCACGCCCGCCGTCTaGGTCGCCATGGCTCGCAGC +
Preference number: 5 (lower is better)
Translates to: PMKNCHLLPAAVLDGLPMPTPAV*VAMARS
Trigger: GCTGCGAGCCATGGCGACCAAGACGGCGGGCGTGGG...CATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS CCA 90 bp TGTCTCCCCCAGCCAGCCTGGAAGGAGCTGTGTGACCGGAGGTCATaGCACAGGAAGCCTACAGCGAAGACCAGCAGCAACAGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: CLPQPAWKELCDRRS*HRKPTAKTSSNRRS
Trigger: GCTCCTCCTGTTGCTGCTGGTCTTCGCTGTAGGCTTCCTGTGCCATGACCTCCGGTCACACAGCTCCTTCCAGGCTGGCTGGGGGAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434544.1
CDS-3UTR CAA 90 bp ACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCACCCACGCCCGCCGTCTaGGTCGCCATGGCTCGCAGC +
Preference number: 5 (lower is better)
Translates to: TFYPLQSWMVYPCRNQWPPTPAV*VAMARS
Trigger: GCTGCGAGCCATGGCGACCAAGACGGCGGGCGTGGG...TGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS CCA 90 bp CCCAGGGCCCACATGATGGTGAGACACTTTGCTGGTCGGCTCTGGTaGGACCTCAGCAGTTCCAGGAACTTGCCTAGGTTTGCCGTGGCA +
Preference number: 5 (lower is better)
Translates to: PRAHMMVRHFAGRLW*DLSSSRNLPRFAVA
Trigger: TGCCACGGCAAACCTAGGCAAGTTCCTGGAACTGCTGAGGTCCCACCAGAGCCGACCAGCAAAGTGTCTCACCATCATGTGGGCCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000475258.5
CDS-3UTR CAA 90 bp TGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGATTGCTGCAACAGGCCCTaGCAGGCCATGTCACAGGTG +
Preference number: 5 (lower is better)
Translates to: WRVPWAQGTQLPVLCSTDCCNRP*QAMSQV
Trigger: CACCTGTGACATGGCCTGCAAGGGCCTGTTGCAGCA...ATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp GAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCCTACCCGCTGCAGTCTaGGATGGTCTACCCATGCAG +
Preference number: 5 (lower is better)
Translates to: ESCLRLMEGSLGPRHTTALPAAV*DGLPMQ
Trigger: CTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAG...GGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS TCA 90 bp AAAAGAGCTCCAGAGACCCTGCTGCCTTCGCCAGCAGCCCTCGGATaGTCCCACGTAGCTCCCGGCTCACCAGGCTGTAGGGATAATCAT +
Preference number: 5 (lower is better)
Translates to: KRAPETLLPSPAALG*SHVAPGSPGCRDNH
Trigger: ATGATTATCCCTACAGCCTGGTGAGCCGGGAGCTACGTGGGATCATCCGAGGGCTGCTGGCGAAGGCAGCAGGGTCTCTGGAGCTCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000435172.6
CDS TCA 90 bp CCCAGCCACACTTTCAGTCCCTCGGTGAGGTTGGCAAAACCTGCTTaGCCCAGGGCCCACATGATGGTGAGACACTTTGCTGGTCGGCTC +
Preference number: 5 (lower is better)
Translates to: PSHTFSPSVRLAKPA*PRAHMMVRHFAGRL
Trigger: GAGCCGACCAGCAAAGTGTCTCACCATCATGTGGGCCCTGGGTCAAGCAGGTTTTGCCAACCTCACCGAGGGACTGAAAGTGTGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000425720.5
ENST00000435172.6
ENST00000475258.5
CDS TCA 90 bp AAAAGAGCTCCAGAGACCCTGCTGCCTTCGCCAGCAGCCCTCGGATaGTCCCACGTAGCTCCCGGCTCACCAGGCTGTAGGGATAATCTA +
Preference number: 5 (lower is better)
Translates to: KRAPETLLPSPAALG*SHVAPGSPGCRDNL
Trigger: TAGATTATCCCTACAGCCTGGTGAGCCGGGAGCTACGTGGGATCATCCGAGGGCTGCTGGCGAAGGCAGCAGGGTCTCTGGAGCTCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475258.5
CDS GCA 90 bp GGCAAAACCTGCTTGACCCAGGGCCCACATGATGGTGAGACACTTTaGTGGTCGGCTCTGGTGGGACCTCAGCAGTTCCAGGAACTTGCC +
Preference number: 5 (lower is better)
Translates to: GKTCLTQGPHDGETL*WSALVGPQQFQELA
Trigger: GGCAAGTTCCTGGAACTGCTGAGGTCCCACCAGAGCCGACCAGCAAAGTGTCTCACCATCATGTGGGCCCTGGGTCAAGCAGGTTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000475258.5
CDS-3UTR CAA 90 bp GGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTGCTGGGAGGCAACTGGCCACTaGCCTAGGAGAGAACTCAGG +
Preference number: 5 (lower is better)
Translates to: GWSTHAEISGQEGRAYCWEATGH*PRRELR
Trigger: CCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTC...CCAGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434544.1
CDS GCA 90 bp ACATCCAGAGCTTTCAGTGCTTCCTCCAGGCTGCGGAAGCGGCCCTaGTTCTGGTTTTGGTTGGGAGGAGTTGCCACCTTCTTTGGCTGC +
Preference number: 5 (lower is better)
Translates to: TSRAFSASSRLRKRP*FWFWLGGVATFFGC
Trigger: GCAGCCAAAGAAGGTGGCAACTCCTCCCAACCAAAACCAGAAGCAGGGCCGCTTCCGCAGCCTGGAGGAAGCACTGAAAGCTCTGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000495312.1
CDS GCA 90 bp GATCCCCAGCCACACTTTCAGTCCCTCGGTGAGGTTGGCAAAACCTaGTTGACCCAGGGCCCACATGATGGTGAGACACTTTGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: DPQPHFQSLGEVGKT*LTQGPHDGETLCWS
Trigger: CGACCAGCAAAGTGTCTCACCATCATGTGGGCCCTGGGTCAAGCAGGTTTTGCCAACCTCACCGAGGGACTGAAAGTGTGGCTGGGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000425720.5
ENST00000435172.6
ENST00000475258.5
CDS GCA 90 bp ACACTCACAGCTTTCAGTGCTTCCTCCAGGCTGCGGAAGCGGCCCTaGTTCTGGTTTTGGTTGGGAGGAGTTGCCACCTTCTTTGGCTGC +
Preference number: 5 (lower is better)
Translates to: TLTAFSASSRLRKRP*FWFWLGGVATFFGC
Trigger: GCAGCCAAAGAAGGTGGCAACTCCTCCCAACCAAAACCAGAAGCAGGGCCGCTTCCGCAGCCTGGAGGAAGCACTGAAAGCTGTGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478980.1
CDS-3UTR CAA 90 bp AGGAAGTGGAAGGCAGAGGGCAAGGGCGGAGTTGTGAGAGGCTACCAGCACAAGGCTCATAAAGGGTGCTaGTGGTCTGGATTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: RKWKAEGKGGVVRGYQHKAHKGC*WSGLQG
Trigger: CCCCTGCAATCCAGACCACAAGCACCCTTTATGAGC...CTTGTGCTGGTAGCCTCTCACAACTCCGCCCTTGCCCTCTGCCTTCCACTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CAA 90 bp GATGGACAGTGGAGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGCCCTGCTTCTGGTTTaGGTTGGGAGGAGTTGCCAC +
Preference number: 5 (lower is better)
Translates to: DGQWREAEPCDQDPQHDGALLLV*VGRSCH
Trigger: GTGGCAACTCCTCCCAACCAAAACCAGAAGCAGGGC...CCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCTCCACTGTCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp GTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTAAGCAGTTCCAGGAACTaGCCTAGGTTTGCCGTGGCA +
Preference number: 5 (lower is better)
Translates to: VDGGFPGPKAHNCLCSALSSSRN*PRFAVA
Trigger: TGCCACGGCAAACCTAGGCAAGTTCCTGGAACTGCT...TAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp TGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGATGTTGGCAAAACCTGCTaGACCCAGGGCCCACATGAT +
Preference number: 5 (lower is better)
Translates to: WRVPWAQGTQLPVLCSTDVGKTC*TQGPHD
Trigger: ATCATGTGGGCCCTGGGTCAAGCAGGTTTTGCCAAC...ATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp CTGGGGGCCATGTGCAGTAGGGCCAGAAAAGTGTTCAGTGGAATTGTGGGTAGGTGCTGCAACAGGCCCTaGCAGGCCATGTCACAGGTG +
Preference number: 5 (lower is better)
Translates to: LGAMCSRARKVFSGIVGRCCNRP*QAMSQV
Trigger: CACCTGTGACATGGCCTGCAAGGGCCTGTTGCAGCA...CCTACCCACAATTCCACTGAACACTTTTCTGGCCCTACTGCACATGGCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS CCA 90 bp GCGGCCCTGCTTCTGGTTTTGGTTGGGAGGAGTTGCCACCTTCTTTaGCTGCTTCTTGTTCCCTGGTTTCTTAGGTTCCACAGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: AALLLVLVGRSCHLL*LLLVPWFLRFHSRG
Trigger: CCCCCTGCTGTGGAACCTAAGAAACCAGGGAACAAGAAGCAGCCAAAGAAGGTGGCAACTCCTCCCAACCAAAACCAGAAGCAGGGCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000478980.1
ENST00000495312.1
CDS CCA 90 bp GGAGGAGGCTCCCAAGATGGTCATCCCTCCCGTGCCCCTTTCACCTaGTGTCTTATCCAGCTCTTGCAACATGGTGAACAGACAGTGGTC +
Preference number: 5 (lower is better)
Translates to: GGGSQDGHPSRAPFT*CLIQLLQHGEQTVV
Trigger: GACCACTGTCTGTTCACCATGTTGCAAGAGCTGGATAAGACACCAGGTGAAAGGGGCACGGGAGGGATGACCATCTTGGGAGCCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475258.5
CDS-3UTR CAA 90 bp CTGCTAAAGTCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGCCCACGCCCGCCGTCTaGGTCGCCATGGCTCGCAGC +
Preference number: 5 (lower is better)
Translates to: LLKSRRELRHQVKKTPMKPTPAV*VAMARS
Trigger: GCTGCGAGCCATGGCGACCAAGACGGCGGGCGTGGG...CTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGACTTTAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321326.11
ENST00000435172.6
CDS-3UTR CAA 90 bp CCAAAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACATTTCCACACTCCGTTaGCTTCCCCGAGCGCCCTGC +
Preference number: 5 (lower is better)
Translates to: PKMEELRWRQLATCLGENISTLR*LPRAPC
Trigger: GCAGGGCGCTCGGGGAAGCAAACGGAGTGTGGAAAT...GTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CAA 90 bp CAGTGGAGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGGTTGGCAAAACCTGCTaGACCCAGGGCCCACATGAT +
Preference number: 5 (lower is better)
Translates to: QWREAEPCDQDPQHDGEWVGKTC*TQGPHD
Trigger: ATCATGTGGGCCCTGGGTCAAGCAGGTTTTGCCAAC...CCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCTCCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp GTTGATGGAGGGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTAGACTTCTGTACCTTCTaGGGAATCTGCTCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: VDGGFPGPKAHNCLCSALDFCTF*GICSQE
Trigger: CTCCTGGGAGCAGATTCCCAAGAAGGTACAGAAGTC...TAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAACCCTCCATCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp TGGGATCCATCTTCTGAGGGTGAAGCTCGAGTGAGCGGGGCAGGCAGCTGTCAAGACTTCTGTACCTTCTaGGGAATCTGCTCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: WDPSSEGEARVSGAGSCQDFCTF*GICSQE
Trigger: CTCCTGGGAGCAGATTCCCAAGAAGGTACAGAAGTC...TTGACAGCTGCCTGCCCCGCTCACTCGAGCTTCACCCTCAGAAGATGGATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS GCA 90 bp CCCTGCTTCTGGTTTTGGTTGGGAGGAGTTGCCACCTTCTTTGGCTaGTTCTTGTTCCCTGGTTTCTTAGGTTCCACAGCAGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: PCFWFWLGGVATFFG*FLFPGFLGSTAGGG
Trigger: CCCACCCCCTGCTGTGGAACCTAAGAAACCAGGGAACAAGAAGCAGCCAAAGAAGGTGGCAACTCCTCCCAACCAAAACCAGAAGCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000478980.1
ENST00000495312.1
CDS GCA 90 bp CAGGCTGCGGAAGCGGCCCTGCTTCTGGTTTTGGTTGGGAGGAGTTaGCACCTTCTTTGGCTGCTTCTTGTTCCCTGGTTTCTTAGGTTC +
Preference number: 5 (lower is better)
Translates to: QAAEAALLLVLVGRS*HLLWLLLVPWFLRF
Trigger: GAACCTAAGAAACCAGGGAACAAGAAGCAGCCAAAGAAGGTGGCAACTCCTCCCAACCAAAACCAGAAGCAGGGCCGCTTCCGCAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000478980.1
ENST00000495312.1
CDS GCA 90 bp AGAAGGGAAGTAGGTATGCAGGGTGGAATCCGGCTTTGCTCCAAATaGCAGCACTTTCAGTCGGGGGTAGAGCTGACACAGCTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: RREVGMQGGIRLCSK*QHFQSGVELTQLLL
Trigger: CAGGAGCAGCTGTGTCAGCTCTACCCCCGACTGAAAGTGCTGGCATTTGGAGCAAAGCCGGATTCCACCCTGCATACCTACTTCCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000425720.5
ENST00000435172.6
ENST00000460904.1
ENST00000475258.5
CDS-3UTR CAA 90 bp CTGGGGGCCATGTGCAGTAGGGCCAGAAAAGTGTTCAGTGGAATTGTGGGTAGGGCTCATAAAGGGTGCTaGTGGTCTGGATTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: LGAMCSRARKVFSGIVGRAHKGC*WSGLQG
Trigger: CCCCTGCAATCCAGACCACAAGCACCCTTTATGAGC...CCTACCCACAATTCCACTGAACACTTTTCTGGCCCTACTGCACATGGCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CAA 90 bp TTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCTCTACAGATGATAGGAGCTCATAAAGGGTGCTaGTGGTCTGGATTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: FPGPKAHNCLCSALQMIGAHKGC*WSGLQG
Trigger: CCCCTGCAATCCAGACCACAAGCACCCTTTATGAGC...TCCTATCATCTGTAGAGCAGAGCACAGGCAGTTGTGTGCCTTGGGCCCAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp ATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCGGAACTTGCCTAGGTTaGCCGTGGCAATCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: MEELRWRQLATCLGENSGGTCLG*PWQSWA
Trigger: AGCCCAAGATTGCCACGGCAAACCTAGGCAAGTTCC...GCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CAA 90 bp TACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGGGGGTGGAATCCGGCTTaGCTCCAAATGCCAGCACTT +
Preference number: 5 (lower is better)
Translates to: YPLQSWMVYPCRNQWPGRGWNPA*LQMPAL
Trigger: AAGTGCTGGCATTTGGAGCAAAGCCGGATTCCACCC...CCTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp GAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCAAGGGGGTGGAATCCGGCTTaGCTCCAAATGCCAGCACTT +
Preference number: 5 (lower is better)
Translates to: EPYTESCLRLMEGSLGPRGWNPA*LQMPAL
Trigger: AAGTGCTGGCATTTGGAGCAAAGCCGGATTCCACCC...CCTTGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS TCA 90 bp GTTCCACAGCAGGGGGTGGGACCTGCTCCTTATTCTGCCGCTTCATaGTATTCTCAAAGCCCCGCTCATAAAGGGTGCTTGTGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: VPQQGVGPAPYSAAS*YSQSPAHKGCLWSG
Trigger: TCCAGACCACAAGCACCCTTTATGAGCGGGGCTTTGAGAATATCATGAAGCGGCAGAATAAGGAGCAGGTCCCACCCCCTGCTGTGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000478980.1
ENST00000495312.1
CDS GCA 90 bp GGACAGGAAAGAAGGGAAGTAGGTATGCAGGGTGGAATCCGGCTTTaGTCCAAATGCCAGCACTTTCAGTCGGGGGTAGAGCTGACACAG +
Preference number: 5 (lower is better)
Translates to: GQERREVGMQGGIRL*SKCQHFQSGVELTQ
Trigger: CTGTGTCAGCTCTACCCCCGACTGAAAGTGCTGGCATTTGGAGCAAAGCCGGATTCCACCCTGCATACCTACTTCCCTTCTTTCCTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000425720.5
ENST00000435172.6
ENST00000460904.1
ENST00000475258.5
CDS CCA 90 bp ACTTGCCTAGGTTTGCCGTGGCAATCTTGGGCTTGTCTTGCAGGATaGCCTGGATACAGATGCGGTAACCATGTAGTGACTCCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: TCLGLPWQSWACLAG*PGYRCGNHVVTPLV
Trigger: CACCAGGGGAGTCACTACATGGTTACCGCATCTGTATCCAGGCCATCCTGCAAGACAAGCCCAAGATTGCCACGGCAAACCTAGGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000435172.6
CDS CCA 90 bp AGGCAAGGCCTTTGTCAGCAGATAGGGACCGCTACAGCTGACCCCTaGGGAAGGAGAAAAAGCCTCCCACCATATCCTCACCTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: RQGLCQQIGTATADP*GRRKSLPPYPHLFL
Trigger: AAGAAAGAGGTGAGGATATGGTGGGAGGCTTTTTCTCCTTCCCCAGGGGTCAGCTGTAGCGGTCCCTATCTGCTGACAAAGGCCTTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460904.1
CDS CCA 90 bp ACTTGCCTAGGTTTGCCGTGGCAATCTTGGGCTTGTCTTGCAGGATaGCCTGGATACAGATGCGGTAACCATGTAGTGACTCCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: TCLGLPWQSWACLAG*PGYRCGNHVVTPLE
Trigger: CTCCAGGGGAGTCACTACATGGTTACCGCATCTGTATCCAGGCCATCCTGCAAGACAAGCCCAAGATTGCCACGGCAAACCTAGGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475258.5
CDS-3UTR CAA 90 bp ACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGGCTCATAAAGGGTGCTaGTGGTCTGGATTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: TATFYPLQSWMVYPCRNQAHKGC*WSGLQG
Trigger: CCCCTGCAATCCAGACCACAAGCACCCTTTATGAGC...CTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp CCACCAAAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGTTTGGTTGGGAGGAGTaGCCACCTTCTTTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: PPKMEELRWRQLATCLGEFGWEE*PPSLAA
Trigger: AGCAGCCAAAGAAGGTGGCAACTCCTCCCAACCAAA...CTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CAA 90 bp GTCTACCCATGCAGAAATCAGTGGCCAGGAAGGCAGGGCCTACTGCTGGGATATTTTGGTTGGGAGGAGTaGCCACCTTCTTTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: VYPCRNQWPGRQGLLLGYFGWEE*PPSLAA
Trigger: AGCAGCCAAAGAAGGTGGCAACTCCTCCCAACCAAA...ATATCCCAGCAGTAGGCCCTGCCTTCCTGGCCACTGATTTCTGCATGGGTAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR CAA 90 bp CCCTTTCCTTCTGCTGTGGCTAGAGCTGTGACCAAGAATGGGAACAGGAGGCTGTGCTTCTGGTTTTGGTaGGGAGGAGTTGCCACCTTC +
Preference number: 5 (lower is better)
Translates to: PFPSAVARAVTKNGNRRLCFWFW*GGVATF
Trigger: GAAGGTGGCAACTCCTCCCAACCAAAACCAGAAGCA...CAGCCTCCTGTTCCCATTCTTGGTCACAGCTCTAGCCACAGCAGAAGGAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp GTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTGCCCTGCTTCTGGTTTaGGTTGGGAGGAGTTGCCAC +
Preference number: 5 (lower is better)
Translates to: VRLLFPNAVLYSSGSPFPALLLV*VGRSCH
Trigger: GTGGCAACTCCTCCCAACCAAAACCAGAAGCAGGGC...AGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp GGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGGCCCTGCTTCTGGTTTaGGTTGGGAGGAGTTGCCAC +
Preference number: 5 (lower is better)
Translates to: GCCFPMRCYILLEAPFLLALLLV*VGRSCH
Trigger: GTGGCAACTCCTCCCAACCAAAACCAGAAGCAGGGC...CAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp AAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTGTGGCAATCTTGGGCTaGTCTTGCAGGATGGCCTGG +
Preference number: 5 (lower is better)
Translates to: KDSHEELPPSTRCSLGWSVAILG*SCRMAW
Trigger: CCAGGCCATCCTGCAAGACAAGCCCAAGATTGCCAC...AGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp TTTCCTTCTGCTGTGGCTAGAGCTGTGACCAAGAATGGGAACAGGAGGCTGCTAGTGGCAATCTTGGGCTaGTCTTGCAGGATGGCCTGG +
Preference number: 5 (lower is better)
Translates to: FPSAVARAVTKNGNRRLLVAILG*SCRMAW
Trigger: CCAGGCCATCCTGCAAGACAAGCCCAAGATTGCCAC...TAGCAGCCTCCTGTTCCCATTCTTGGTCACAGCTCTAGCCACAGCAGAAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp AGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTGTGGCAATCTTGGGCTaGTCTTGCAGGATGGCCTGG +
Preference number: 5 (lower is better)
Translates to: REAEPCDQDPQHDGEWKVVAILG*SCRMAW
Trigger: CCAGGCCATCCTGCAAGACAAGCCCAAGATTGCCAC...AACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp ACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGTTTTTGCCGTGGCAATCTaGGGCTTGTCTTGCAGGATG +
Preference number: 5 (lower is better)
Translates to: TEVEATGHLPRRELRHQVFAVAI*GLSCRM
Trigger: CATCCTGCAAGACAAGCCCAAGATTGCCACGGCAAA...AACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CAA 90 bp ATGGGGAATGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACAGGGAGGGAGCAGTTCCAGGAACTaGCCTAGGTTTGCCGTGGCA +
Preference number: 5 (lower is better)
Translates to: MGNGKLEEVGLQGRGQGGSSSRN*PRFAVA
Trigger: TGCCACGGCAAACCTAGGCAAGTTCCTGGAACTGCT...CCCTCCCTGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp TGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGAGCAGTTCCAGGAACTaGCCTAGGTTTGCCGTGGCA +
Preference number: 5 (lower is better)
Translates to: CHLLPAAVLDGLPMQKSVSSSRN*PRFAVA
Trigger: TGCCACGGCAAACCTAGGCAAGTTCCTGGAACTGCT...CACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp TGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACAGGGAGGGGCTTAGAGAGTGGGAAGAAGTCCTaGGGGCCAATCATGCCGAAG +
Preference number: 5 (lower is better)
Translates to: WKVGRSRTTREGTGRGLESGKKS*GPIMPK
Trigger: CTTCGGCATGATTGGCCCCAAGGACTTCTTCCCACT...CTCTAAGCCCCTCCCTGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp GAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGTTAAAAGTGGGAAGAAGTCCTaGGGGCCAATCATGCCGAAG +
Preference number: 5 (lower is better)
Translates to: EVEATGHLPRRELRHQVKSGKKS*GPIMPK
Trigger: CTTCGGCATGATTGGCCCCAAGGACTTCTTCCCACT...TTTAACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CAA 90 bp ACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGGGGTGGAATCCGGCTTaGCTCCAAATGCCAGCACTT +
Preference number: 5 (lower is better)
Translates to: TATFYPLQSWMVYPCRNQGWNPA*LQMPAL
Trigger: AAGTGCTGGCATTTGGAGCAAAGCCGGATTCCACCC...CTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp GATATCAGGGCAAGTGCCCAGTCCAAGAAAGCCACTGTAATGTCCTGTAGGCAATGCTGCAACAGGCCCTaGCAGGCCATGTCACAGGTG +
Preference number: 5 (lower is better)
Translates to: DIRASAQSKKATVMSCRQCCNRP*QAMSQV
Trigger: CACCTGTGACATGGCCTGCAAGGGCCTGTTGCAGCA...TTGCCTACAGGACATTACAGTGGCTTTCTTGGACTGGGCACTTGCCCTGATATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434544.1
ENST00000435172.6
CDS-3UTR CAA 90 bp GGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCCAGCCAGCTGTAGCCTaGCAGACTGTAGGAGTAGAG +
Preference number: 5 (lower is better)
Translates to: GEAAVSQCGAIFFWKPLSQPAVA*QTVGVE
Trigger: CTCTACTCCTACAGTCTGCAAGGCTACAGCTGGCTG...GGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp AGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCTACCCGCTGCAGTCTaGGATGGTCTACCCATGCAG +
Preference number: 5 (lower is better)
Translates to: RTATFYPLQSWMVYPCRNLPAAV*DGLPMQ
Trigger: CTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAG...ATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS GCA 90 bp CCGTGGCAATCTTGGGCTTGTCTTGCAGGATGGCCTGGATACAGATaGGGTAACCATGTAGTGACTCCCCTGGTGTCTTATCCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: PWQSWACLAGWPGYR*GNHVVTPLVSYPAL
Trigger: AAGAGCTGGATAAGACACCAGGGGAGTCACTACATGGTTACCGCATCTGTATCCAGGCCATCCTGCAAGACAAGCCCAAGATTGCCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000435172.6
CDS CCA 90 bp TTGGTTGGGAGGAGTTGCCACCTTCTTTGGCTGCTTCTTGTTCCCTaGTTTCTTAGGTTCCACAGCAGGGGGTGGGACCTGCTCCTTATT +
Preference number: 5 (lower is better)
Translates to: LVGRSCHLLWLLLVP*FLRFHSRGWDLLLI
Trigger: AATAAGGAGCAGGTCCCACCCCCTGCTGTGGAACCTAAGAAACCAGGGAACAAGAAGCAGCCAAAGAAGGTGGCAACTCCTCCCAACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000478980.1
ENST00000495312.1
CDS CCA 90 bp ACCTCAGCAGTTCCAGGAACTTGCCTAGGTTTGCCGTGGCAATCTTaGGCTTGTCTTGCAGGATGGCCTGGATACAGATGCGGTAACCAT +
Preference number: 5 (lower is better)
Translates to: TSAVPGTCLGLPWQS*ACLAGWPGYRCGNH
Trigger: ATGGTTACCGCATCTGTATCCAGGCCATCCTGCAAGACAAGCCCAAGATTGCCACGGCAAACCTAGGCAAGTTCCTGGAACTGCTGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000475258.5
CDS CCA 90 bp ACTTGCCTAGGTTTGCCGTGGCAATCTTGGGCTTGTCTTGCAGGATaGCCTGGATACAGATGCGGTAACCATGTAGTGACTCCCCATGAG +
Preference number: 5 (lower is better)
Translates to: TCLGLPWQSWACLAG*PGYRCGNHVVTPHE
Trigger: CTCATGGGGAGTCACTACATGGTTACCGCATCTGTATCCAGGCCATCCTGCAAGACAAGCCCAAGATTGCCACGGCAAACCTAGGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404032.7
CDS-3UTR CAA 90 bp GAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTGGATTTGGTTGGGAGGAGTaGCCACCTTCTTTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: EAEPCDQDPQHDGEWKVGFGWEE*PPSLAA
Trigger: AGCAGCCAAAGAAGGTGGCAACTCCTCCCAACCAAA...TCCAACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp TCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAATTTGGTTGGGAGGAGTaGCCACCTTCTTTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: STRCSLGWSTHAEISGQEFGWEE*PPSLAA
Trigger: AGCAGCCAAAGAAGGTGGCAACTCCTCCCAACCAAA...TTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp TGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGTGCTTCTGGTTTTGGTaGGGAGGAGTTGCCACCTTC +
Preference number: 5 (lower is better)
Translates to: CHLLPAAVLDGLPMQKSVCFWFW*GGVATF
Trigger: GAAGGTGGCAACTCCTCCCAACCAAAACCAGAAGCA...CACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp GCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTGCCCTGCTTCTGGTTTaGGTTGGGAGGAGTTGCCAC +
Preference number: 5 (lower is better)
Translates to: AVSQCGAIFFWKPLSFCCALLLV*VGRSCH
Trigger: GTGGCAACTCCTCCCAACCAAAACCAGAAGCAGGGC...ACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp CAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCATTTGCCGTGGCAATCTaGGGCTTGTCTTGCAGGATG +
Preference number: 5 (lower is better)
Translates to: QEPYTESCLRLMEGSLGPFAVAI*GLSCRM
Trigger: CATCCTGCAAGACAAGCCCAAGATTGCCACGGCAAA...TGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp AAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTGGAACTTGCCTAGGTTaGCCGTGGCAATCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: KDSHEELPPSTRCSLGWSGTCLG*PWQSWA
Trigger: AGCCCAAGATTGCCACGGCAAACCTAGGCAAGTTCC...AGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp AGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATGGAACTTGCCTAGGTTaGCCGTGGCAATCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: RTATFYPLQSWMVYPCRNGTCLG*PWQSWA
Trigger: AGCCCAAGATTGCCACGGCAAACCTAGGCAAGTTCC...ATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp GGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGGTTGGCAAAACCTGCTaGACCCAGGGCCCACATGAT +
Preference number: 5 (lower is better)
Translates to: GCCFPMRCYILLEAPFLLVGKTC*TQGPHD
Trigger: ATCATGTGGGCCCTGGGTCAAGCAGGTTTTGCCAAC...CAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp TGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGATCATGCCGAAGCCCTaGGTAAGGTTGGGATGCATC +
Preference number: 5 (lower is better)
Translates to: CHLLPAAVLDGLPMQKSVIMPKP*VRLGCI
Trigger: GATGCATCCCAACCTTACCAAGGGCTTCGGCATGAT...CACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp TCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAATCATGCCGAAGCCCTaGGTAAGGTTGGGATGCATC +
Preference number: 5 (lower is better)
Translates to: STRCSLGWSTHAEISGQEIMPKP*VRLGCI
Trigger: GATGCATCCCAACCTTACCAAGGGCTTCGGCATGAT...TTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp CAAGAACCATATACTGAGTCCTGTCTCAGGTTGATGGAGGGTTCCCTGGGCCCAGACTTCTGTACCTTCTaGGGAATCTGCTCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: QEPYTESCLRLMEGSLGPDFCTF*GICSQE
Trigger: CTCCTGGGAGCAGATTCCCAAGAAGGTACAGAAGTC...TGGGCCCAGGGAACCCTCCATCAACCTGAGACAGGACTCAGTATATGGTTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp GAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGTTAAAGACTTCTGTACCTTCTaGGGAATCTGCTCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: EVEATGHLPRRELRHQVKDFCTF*GICSQE
Trigger: CTCCTGGGAGCAGATTCCCAAGAAGGTACAGAAGTC...TTTAACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CAA 90 bp TTATTCCACCTGGTAGGGCATACCCAAGAACCATATACTGAGTCCTGTCTCAGGTGCTGCAACAGGCCCTaGCAGGCCATGTCACAGGTG +
Preference number: 5 (lower is better)
Translates to: LFHLVGHTQEPYTESCLRCCNRP*QAMSQV
Trigger: CACCTGTGACATGGCCTGCAAGGGCCTGTTGCAGCA...CCTGAGACAGGACTCAGTATATGGTTCTTGGGTATGCCCTACCAGGTGGAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
CDS-3UTR CAA 90 bp GTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATTGCTGCAACAGGCCCTaGCAGGCCATGTCACAGGTG +
Preference number: 5 (lower is better)
Translates to: VKKTPMKNCHLLPAAVLDCCNRP*QAMSQV
Trigger: CACCTGTGACATGGCCTGCAAGGGCCTGTTGCAGCA...ATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS-3UTR CAA 90 bp AGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGCCAGCTGTAGCCTaGCAGACTGTAGGAGTAGAG +
Preference number: 5 (lower is better)
Translates to: RTATFYPLQSWMVYPCRNQPAVA*QTVGVE
Trigger: CTCTACTCCTACAGTCTGCAAGGCTACAGCTGGCTG...ATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp CAGTCCAAGAAAGCCACTGTAATGTCCTGTAGGCAAAGCCAGGTCCAGTGGACACAGCCAGCTGTAGCCTaGCAGACTGTAGGAGTAGAG +
Preference number: 5 (lower is better)
Translates to: QSKKATVMSCRQSQVQWTQPAVA*QTVGVE
Trigger: CTCTACTCCTACAGTCTGCAAGGCTACAGCTGGCTG...TGTCCACTGGACCTGGCTTTGCCTACAGGACATTACAGTGGCTTTCTTGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR CAA 90 bp CTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTGCTACCCGCTGCAGTCTaGGATGGTCTACCCATGCAG +
Preference number: 5 (lower is better)
Translates to: LFPNAVLYSSGSPFPSAVLPAAV*DGLPMQ
Trigger: CTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAG...CACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp TGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTGGAAGAAGTAGGACTGAGGCAACTGGCCACTaGCCTAGGAGAGAACTCAGG +
Preference number: 5 (lower is better)
Translates to: CDQDPQHDGEWKVGRSRTEATGH*PRRELR
Trigger: CCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTC...AGTCCTACTTCTTCCAACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS TCA 90 bp GCTGGCTCAGCGTGGGTTCACTTAGAGGAGCTTGTAGCTTGTAGTTaGGATAGCTGGCCAGGTCCTTCAACCATATGGATGGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: AGSAWVHLEELVACS*DSWPGPSTIWMGFQ
Trigger: CTGGAAACCCATCCATATGGTTGAAGGACCTGGCCAGCTATCTCAACTACAAGCTACAAGCTCCTCTAAGTGAACCCACGCTGAGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000495312.1
CDS GCA 90 bp TTCTTGTTCCCTGGTTTCTTAGGTTCCACAGCAGGGGGTGGGACCTaGTCCTTATTCTGCCGCTTCATGATATTCTCAAAGCCCCGCTCA +
Preference number: 5 (lower is better)
Translates to: FLFPGFLGSTAGGGT*SLFCRFMIFSKPRS
Trigger: TGAGCGGGGCTTTGAGAATATCATGAAGCGGCAGAATAAGGAGCAGGTCCCACCCCCTGCTGTGGAACCTAAGAAACCAGGGAACAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000478980.1
ENST00000495312.1
CDS GCA 90 bp CCGTGGCAATCTTGGGCTTGTCTTGCAGGATGGCCTGGATACAGATaGGGTAACCATGTAGTGACTCCCCTGGAGAGATACACATTCTCA +
Preference number: 5 (lower is better)
Translates to: PWQSWACLAGWPGYR*GNHVVTPLERYTFS
Trigger: TGAGAATGTGTATCTCTCCAGGGGAGTCACTACATGGTTACCGCATCTGTATCCAGGCCATCCTGCAAGACAAGCCCAAGATTGCCACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475258.5
CDS CCA 90 bp TGGCTGCTTCTTGTTCCCTGGTTTCTTAGGTTCCACAGCAGGGGGTaGGACCTGCTCCTTATTCTGCCGCTTCATGATATTCTCAAAGCC +
Preference number: 5 (lower is better)
Translates to: WLLLVPWFLRFHSRG*DLLLILPLHDILKA
Trigger: GGCTTTGAGAATATCATGAAGCGGCAGAATAAGGAGCAGGTCCCACCCCCTGCTGTGGAACCTAAGAAACCAGGGAACAAGAAGCAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000478980.1
ENST00000495312.1
CDS-3UTR CAA 90 bp AGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGTTAAAATGCTTCTGGTTTTGGTaGGGAGGAGTTGCCACCTTC +
Preference number: 5 (lower is better)
Translates to: RWRQLATCLGENSGTKLKCFWFW*GGVATF
Trigger: GAAGGTGGCAACTCCTCCCAACCAAAACCAGAAGCA...TTTTAACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CAA 90 bp AGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTTGCTTCTGGTTTTGGTaGGGAGGAGTTGCCACCTTC +
Preference number: 5 (lower is better)
Translates to: REAEPCDQDPQHDGEWKVCFWFW*GGVATF
Trigger: GAAGGTGGCAACTCCTCCCAACCAAAACCAGAAGCA...AACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp GAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACCCGTGGCAATCTTGGGCTaGTCTTGCAGGATGGCCTGG +
Preference number: 5 (lower is better)
Translates to: ELRHQVKKTPMKNCHLLPVAILG*SCRMAW
Trigger: CCAGGCCATCCTGCAAGACAAGCCCAAGATTGCCAC...GGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp ACCAAAGATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAATTTGCCGTGGCAATCTaGGGCTTGTCTTGCAGGATG +
Preference number: 5 (lower is better)
Translates to: TKDGRTEVEATGHLPRREFAVAI*GLSCRM
Trigger: CATCCTGCAAGACAAGCCCAAGATTGCCACGGCAAA...TTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCATCTTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CAA 90 bp CTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGCTGTGGGAACTTGCCTAGGTTaGCCGTGGCAATCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: LFPNAVLYSSGSPFPSAVGTCLG*PWQSWA
Trigger: AGCCCAAGATTGCCACGGCAAACCTAGGCAAGTTCC...CACAGCAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp AGAGAAGCTGAGCCTTGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTATCATGCCGAAGCCCTaGGTAAGGTTGGGATGCATC +
Preference number: 5 (lower is better)
Translates to: REAEPCDQDPQHDGEWKVIMPKP*VRLGCI
Trigger: GATGCATCCCAACCTTACCAAGGGCTTCGGCATGAT...AACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACAAGGCTCAGCTTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp CTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTAGTGGGAAGAAGTCCTaGGGGCCAATCATGCCGAAG +
Preference number: 5 (lower is better)
Translates to: LRHQVKKTPMKNCHLLPASGKKS*GPIMPK
Trigger: CTTCGGCATGATTGGCCCCAAGGACTTCTTCCCACT...AGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp TGTGACCAAGACCCCCAGCATGATGGGGAATGGAAAGTTGGAAGAAGTAGGACTAGTGGGAAGAAGTCCTaGGGGCCAATCATGCCGAAG +
Preference number: 5 (lower is better)
Translates to: CDQDPQHDGEWKVGRSRTSGKKS*GPIMPK
Trigger: CTTCGGCATGATTGGCCCCAAGGACTTCTTCCCACT...AGTCCTACTTCTTCCAACTTTCCATTCCCCATCATGCTGGGGGTCTTGGTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp GTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATCTACCCGCTGCAGTCTaGGATGGTCTACCCATGCAG +
Preference number: 5 (lower is better)
Translates to: VKKTPMKNCHLLPAAVLDLPAAV*DGLPMQ
Trigger: CTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAG...ATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000434544.1
ENST00000435172.6
CDS TCA 90 bp GATACACATTCTCACACCTACTCACATTATTTGGCATCCCAAACCTaGAATCTCCCATTTGTCAGCGGTGAGCCCAGGCCCCAGGTCCAC +
Preference number: 5 (lower is better)
Translates to: DTHSHTYSHYLASQT*NLPFVSGEPRPQVH
Trigger: GTGGACCTGGGGCCTGGGCTCACCGCTGACAAATGGGAGATTTCAGGTTTGGGATGCCAAATAATGTGAGTAGGTGTGAGAATGTGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475258.5
CDS-3UTR CAA 90 bp CCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGTTCTTTGGCTGCTTCTaGTTCCCTGGTTTCTTAGGT +
Preference number: 5 (lower is better)
Translates to: PMKNCHLLPAAVLDGLPMFFGCF*FPGFLG
Trigger: ACCTAAGAAACCAGGGAACAAGAAGCAGCCAAAGAA...CATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp CTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGAAGTTCTTTGGCTGCTTCTaGTTCCCTGGTTTCTTAGGT +
Preference number: 5 (lower is better)
Translates to: LPAAVLDGLPMQKSVARKFFGCF*FPGFLG
Trigger: ACCTAAGAAACCAGGGAACAAGAAGCAGCCAAAGAA...CTTCCTGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp CCTCAGCAGCTCCTGGTTGGTAAGCTTGAGGGACTGAATGGTTTCTTGCAAAGATTTGCCGTGGCAATCTaGGGCTTGTCTTGCAGGATG +
Preference number: 5 (lower is better)
Translates to: PQQLLVGKLEGLNGFLQRFAVAI*GLSCRM
Trigger: CATCCTGCAAGACAAGCCCAAGATTGCCACGGCAAA...TCTTTGCAAGAAACCATTCAGTCCCTCAAGCTTACCAACCAGGAGCTGCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435172.6
CDS-3UTR CAA 90 bp GTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTGCAGTCTTGGATGTTGGCAAAACCTGCTaGACCCAGGGCCCACATGAT +
Preference number: 5 (lower is better)
Translates to: VKKTPMKNCHLLPAAVLDVGKTC*TQGPHD
Trigger: ATCATGTGGGCCCTGGGTCAAGCAGGTTTTGCCAAC...ATCCAAGACTGCAGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp CTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTACCCGCTATCATGCCGAAGCCCTaGGTAAGGTTGGGATGCATC +
Preference number: 5 (lower is better)
Translates to: LRHQVKKTPMKNCHLLPAIMPKP*VRLGCI
Trigger: GATGCATCCCAACCTTACCAAGGGCTTCGGCATGAT...AGCGGGTAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp TTATTCCACCTGGTAGGGCATACCCAAGAACCATATACTGAGTCCTGTCTCAGGCAGCCAGCTGTAGCCTaGCAGACTGTAGGAGTAGAG +
Preference number: 5 (lower is better)
Translates to: LFHLVGHTQEPYTESCLRQPAVA*QTVGVE
Trigger: CTCTACTCCTACAGTCTGCAAGGCTACAGCTGGCTG...CCTGAGACAGGACTCAGTATATGGTTCTTGGGTATGCCCTACCAGGTGGAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
CDS-3UTR CAA 90 bp GAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCACCAAGTTAAATGTCTTATCCAGCTCTaGCAACATGGTGAACAGACA +
Preference number: 5 (lower is better)
Translates to: EVEATGHLPRRELRHQVKCLIQL*QHGEQT
Trigger: TGTCTGTTCACCATGTTGCAAGAGCTGGATAAGACA...TTTAACTTGGTGCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238788.14
CDS-3UTR CAA 90 bp ATGGAAGAACTGAGGTGGAGGCAACTGGCCACTTGCCTAGGAGAGAACTCAGGCGGACTGAATGGTTTCTaGCAAAGACTTCTGTACCTT +
Preference number: 5 (lower is better)
Translates to: MEELRWRQLATCLGENSGGLNGF*QRLLYL
Trigger: AAGGTACAGAAGTCTTTGCAAGAAACCATTCAGTCC...GCCTGAGTTCTCTCCTAGGCAAGTGGCCAGTTGCCTCCACCTCAGTTCTTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CAA 90 bp CTGGGGGCCATGTGCAGTAGGGCCAGAAAAGTGTTCAGTGGAATTGTGGGTAGGGGACTGAATGGTTTCTaGCAAAGACTTCTGTACCTT +
Preference number: 5 (lower is better)
Translates to: LGAMCSRARKVFSGIVGRGLNGF*QRLLYL
Trigger: AAGGTACAGAAGTCTTTGCAAGAAACCATTCAGTCC...CCTACCCACAATTCCACTGAACACTTTTCTGGCCCTACTGCACATGGCCCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CAA 90 bp CCCTTTCCTTCTGCTGTGGCTAGAGCTGTGACCAAGAATGGGAACAGGAGGCTGAGAAGCAGGAATCATTaGTCAGAAGAACACAGAAGC +
Preference number: 5 (lower is better)
Translates to: PFPSAVARAVTKNGNRRLRSRNH*SEEHRS
Trigger: GCTTCTGTGTTCTTCTGACAAATGATTCCTGCTTCT...CAGCCTCCTGTTCCCATTCTTGGTCACAGCTCTAGCCACAGCAGAAGGAAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS TCA 90 bp GAGGGAGGATCACAGAATGAGGCCCAGAAACATTCACAGTCACGATaGTTTGAGACCAGCCCAAATCACCCATGGAAATCAGGACAGTGT +
Preference number: 5 (lower is better)
Translates to: EGGSQNEAQKHSQSR*FETSPNHPWKSGQC
Trigger: ACACTGTCCTGATTTCCATGGGTGATTTGGGCTGGTCTCAAATCATCGTGACTGTGAATGTTTCTGGGCCTCATTCTGTGATCCTCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495312.1
CDS-3UTR CAA 90 bp GGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCTTCTGTGTCTTATCCAGCTCTaGCAACATGGTGAACAGACA +
Preference number: 5 (lower is better)
Translates to: GCCFPMRCYILLEAPFLLCLIQL*QHGEQT
Trigger: TGTCTGTTCACCATGTTGCAAGAGCTGGATAAGACA...CAGAAGGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000435172.6
CDS-3UTR CAA 90 bp CTGCTAAAGTCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGGGGTGGAATCCGGCTTaGCTCCAAATGCCAGCACTT +
Preference number: 5 (lower is better)
Translates to: LLKSRRELRHQVKKTPMKGWNPA*LQMPAL
Trigger: AAGTGCTGGCATTTGGAGCAAAGCCGGATTCCACCC...CTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGACTTTAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321326.11
ENST00000435172.6
CDS-3UTR CAA 90 bp ACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAGGACTGAATGGTTTCTaGCAAAGACTTCTGTACCTT +
Preference number: 5 (lower is better)
Translates to: TFYPLQSWMVYPCRNQWPGLNGF*QRLLYL
Trigger: AAGGTACAGAAGTCTTTGCAAGAAACCATTCAGTCC...TGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp ACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGTGGCCAAGAAGCAGGAATCATTaGTCAGAAGAACACAGAAGC +
Preference number: 5 (lower is better)
Translates to: TFYPLQSWMVYPCRNQWPRSRNH*SEEHRS
Trigger: GCTTCTGTGTTCTTCTGACAAATGATTCCTGCTTCT...TGGCCACTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238788.14
ENST00000404032.7
CDS-3UTR CAA 90 bp GGTGAGGCTGCTGTTTCCCAATGCGGTGCTATATTCTTCTGGAAGCCCCTTTCCATGGGGAATGGAAAGTaGGAAGAAGTAGGACTACAA +
Preference number: 5 (lower is better)
Translates to: GEAAVSQCGAIFFWKPLSMGNGK*EEVGLQ
Trigger: TTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCAT...GGAAAGGGGCTTCCAGAAGAATATAGCACCGCATTGGGAAACAGCAGCCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp ACTGCCACCTTCTACCCGCTGCAGTCTTGGATGGTCTACCCATGCAGAAATCAGATGGGGAATGGAAAGTaGGAAGAAGTAGGACTACAA +
Preference number: 5 (lower is better)
Translates to: TATFYPLQSWMVYPCRNQMGNGK*EEVGLQ
Trigger: TTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCAT...CTGATTTCTGCATGGGTAGACCATCCAAGACTGCAGCGGGTAGAAGGTGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp CAGCATGATGGGGAATGGAAAGTTGGAAGAAGTAGGACTACAAGGGAGGGGACATTCTTTGGCTGCTTCTaGTTCCCTGGTTTCTTAGGT +
Preference number: 5 (lower is better)
Translates to: QHDGEWKVGRSRTTREGTFFGCF*FPGFLG
Trigger: ACCTAAGAAACCAGGGAACAAGAAGCAGCCAAAGAA...TGTCCCCTCCCTTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCATCATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp TTTCCTTCTGCTGTGGCTAGAGCTGTGACCAAGAATGGGAACAGGAGGCTGCTAATGGGGAATGGAAAGTaGGAAGAAGTAGGACTACAA +
Preference number: 5 (lower is better)
Translates to: FPSAVARAVTKNGNRRLLMGNGK*EEVGLQ
Trigger: TTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCAT...TAGCAGCCTCCTGTTCCCATTCTTGGTCACAGCTCTAGCCACAGCAGAAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS TCA 90 bp GTGTGGGGCACTGGGATCTGTTATACCACCCTTTTTGAATTTATTTaGACTTGTCTGAGCTTGAGGAAGCTGGAAGGACTTACCATGAGT +
Preference number: 5 (lower is better)
Translates to: VWGTGICYTTLFEFI*TCLSLRKLEGLTMS
Trigger: ACTCATGGTAAGTCCTTCCAGCTTCCTCAAGCTCAGACAAGTTCAAATAAATTCAAAAAGGGTGGTATAACAGATCCCAGTGCCCCACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495312.1
CDS TCA 90 bp AATCAGGACAGTGTGGGGCACTGGGATCTGTTATACCACCCTTTTTaGATTTATTTGAACTTGTCTGAGCTTGAGGAAGCTGGAAGGACT +
Preference number: 5 (lower is better)
Translates to: NQDSVGHWDLLYHPF*IYLNLSELEEAGRT
Trigger: AGTCCTTCCAGCTTCCTCAAGCTCAGACAAGTTCAAATAAATTCAAAAAGGGTGGTATAACAGATCCCAGTGCCCCACACTGTCCTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495312.1
CDS-3UTR CAA 90 bp AGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCCACCTTCTATTCTTTGGCTGCTTCTaGTTCCCTGGTTTCTTAGGT +
Preference number: 5 (lower is better)
Translates to: RELRHQVKKTPMKNCHLLFFGCF*FPGFLG
Trigger: ACCTAAGAAACCAGGGAACAAGAAGCAGCCAAAGAA...TAGAAGGTGGCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
CDS-3UTR CAA 90 bp AAGTCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCTGTCTTATCCAGCTCTaGCAACATGGTGAACAGACA +
Preference number: 5 (lower is better)
Translates to: KSRRELRHQVKKTPMKNCCLIQL*QHGEQT
Trigger: TGTCTGTTCACCATGTTGCAAGAGCTGGATAAGACA...GCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321326.11
ENST00000435172.6
CDS-3UTR CAA 90 bp AAGTCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCGGACTGAATGGTTTCTaGCAAAGACTTCTGTACCTT +
Preference number: 5 (lower is better)
Translates to: KSRRELRHQVKKTPMKNCGLNGF*QRLLYL
Trigger: AAGGTACAGAAGTCTTTGCAAGAAACCATTCAGTCC...GCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321326.11
ENST00000435172.6
CDS-3UTR CAA 90 bp AAGTCTAGGAGAGAACTCAGGCACCAAGTTAAAAAGACTCCCATGAAGAACTGCATGGGGAATGGAAAGTaGGAAGAAGTAGGACTACAA +
Preference number: 5 (lower is better)
Translates to: KSRRELRHQVKKTPMKNCMGNGK*EEVGLQ
Trigger: TTGTAGTCCTACTTCTTCCAACTTTCCATTCCCCAT...GCAGTTCTTCATGGGAGTCTTTTTAACTTGGTGCCTGAGTTCTCTCCTAGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321326.11
ENST00000435172.6
CDS CAA 90 bp CGCCGACCCTTCTTCACTACCTCCCACCGCCCCACGCCCGCCGTCTaGGTCGCCATGGCTCGCAGCCCTCCCTCCTCGGCCACTTCCCCG +
Preference number: 6 (lower is better)
Translates to: RRPFFTTSHRPTPAV*VAMARSPPSSATSP
Trigger: CGGGGAAGTGGCCGAGGAGGGAGGGCTGCGAGCCATGGCGACCAAGACGGCGGGCGTGGGGCGGTGGGAGGTAGTGAAGAAGGGTCGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000495312.1
CDS GCA 72 bp CGTATTTCCACACTCCGTTTGCTTCCCCGAGCGCCCTaGGGTTCCTGCCGCCTCCTCGGCCGCCGGCGCCGG +
Preference number: 6 (lower is better)
Translates to: RISTLRLLPRAP*GSCRLLGRRRR
Trigger: CCGGCGCCGGCGGCCGAGGAGGCGGCAGGAACCGCAGGGCGCTCGGGGAAGCAAACGGAGTGTGGAAATACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000495312.1
CDS CCA 72 bp TCTTCACTACCTCCCACCGCCCCACGCCCGCCGTCTTaGTCGCCATGGCTCGCAGCCCTCCCTCCTCGGCCA +
Preference number: 6 (lower is better)
Translates to: SSLPPTAPRPPS*SPWLAALPPRP
Trigger: TGGCCGAGGAGGGAGGGCTGCGAGCCATGGCGACCAAGACGGCGGGCGTGGGGCGGTGGGAGGTAGTGAAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000495312.1
CDS CAA 72 bp GCCCAGAGCAGGCACAGCGAGGCGCTGGGCAGAGCTTaGTGTTCTCACAGGGCCACAAAGCCAGCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: AQSRHSEALGRA*CSHRATKPAPG
Trigger: GCCTGGAGCTGGCTTTGTGGCCCTGTGAGAACACAAAGCTCTGCCCAGCGCCTCGCTGTGCCTGCTCTGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460665.1
CDS GCA 72 bp GATTGCAGGGGTCAGGTCGTATTTCCACACTCCGTTTaGTTCCCCGAGCGCCCTGCGGTTCCTGCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: DCRGQVVFPHSV*FPERPAVPAAS
Trigger: GGAGGCGGCAGGAACCGCAGGGCGCTCGGGGAAGCAAACGGAGTGTGGAAATACGACCTGACCCCTGCAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000495312.1
CDS GCA 72 bp CCTTCTCCTGCTGGGCCAGGTGTGCAGGAATGCAGCTaGCGGTTGGAGCCTAGGCTCAGGCTTCAGGAAGCC +
Preference number: 6 (lower is better)
Translates to: PSPAGPGVQECS*RLEPRLRLQEA
Trigger: GGCTTCCTGAAGCCTGAGCCTAGGCTCCAACCGGCAGCTGCATTCCTGCACACCTGGCCCAGCAGGAGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460665.1
CDS GCA 72 bp GCATGCAGAGCTGCCCTTCTCCTGCTGGGCCAGGTGTaGAGGAATGCAGCTGCCGGTTGGAGCCTAGGCTCA +
Preference number: 6 (lower is better)
Translates to: ACRAALLLLGQV*RNAAAGWSLGS
Trigger: TGAGCCTAGGCTCCAACCGGCAGCTGCATTCCTGCACACCTGGCCCAGCAGGAGAAGGGCAGCTCTGCATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460665.1
CDS CAA 72 bp CCTGCTGGGCCAGGTGTGCAGGAATGCAGCTGCCGGTaGGAGCCTAGGCTCAGGCTTCAGGAAGCCTCAGGT +
Preference number: 6 (lower is better)
Translates to: PAGPGVQECSCR*EPRLRLQEASG
Trigger: ACCTGAGGCTTCCTGAAGCCTGAGCCTAGGCTCCAACCGGCAGCTGCATTCCTGCACACCTGGCCCAGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460665.1
CDS CCA 72 bp CAGCCAGCCTGGAAGGAGCTGTGTGACCGGAGGTCATaGCACAGGAAGCCTACAGCGAAGACCAGCAGCAAC +
Preference number: 6 (lower is better)
Translates to: QPAWKELCDRRS*HRKPTAKTSSN
Trigger: GTTGCTGCTGGTCTTCGCTGTAGGCTTCCTGTGCCATGACCTCCGGTCACACAGCTCCTTCCAGGCTGGCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434544.1
CDS GCA 72 bp TGCTTGACCCAGGGCCCACATGATGGTGAGACACTTTaGTGGTCGGCTCTGGTGGGACCTCAGCAGTTCCAG +
Preference number: 6 (lower is better)
Translates to: CLTQGPHDGETL*WSALVGPQQFQ
Trigger: CTGGAACTGCTGAGGTCCCACCAGAGCCGACCAGCAAAGTGTCTCACCATCATGTGGGCCCTGGGTCAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000475258.5
CDS CCA 72 bp TCCTCCAGGCTGCGGAAGCGGCCCTGCTTCTGGTTTTaGTTGGGAGGAGTTGCCACCTTCTTTGGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: SSRLRKRPCFWF*LGGVATFFGCF
Trigger: GAAGCAGCCAAAGAAGGTGGCAACTCCTCCCAACCAAAACCAGAAGCAGGGCCGCTTCCGCAGCCTGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000478980.1
ENST00000495312.1
CDS CAA 90 bp CCCCAGCCACACTTTCAGTCCCTCGGTGAGGTTGGCAAAACCTGCTaGACCCAGGGCCCACATGATGGTGAGACACTTTGCTGGTCGGCT +
Preference number: 6 (lower is better)
Translates to: PQPHFQSLGEVGKTC*TQGPHDGETLCWSA
Trigger: AGCCGACCAGCAAAGTGTCTCACCATCATGTGGGCCCTGGGTCAAGCAGGTTTTGCCAACCTCACCGAGGGACTGAAAGTGTGGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000425720.5
ENST00000435172.6
ENST00000475258.5
CDS CCA 72 bp GCCCACATGATGGTGAGACACTTTGCTGGTCGGCTCTaGTGGGACCTCAGCAGTTCCAGGAACTTGCCTAGG +
Preference number: 6 (lower is better)
Translates to: AHMMVRHFAGRL*WDLSSSRNLPR
Trigger: CCTAGGCAAGTTCCTGGAACTGCTGAGGTCCCACCAGAGCCGACCAGCAAAGTGTCTCACCATCATGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000475258.5
CDS CCA 72 bp TTGACCCAGGGCCCACATGATGGTGAGACACTTTGCTaGTCGGCTCTGGTGGGACCTCAGCAGTTCCAGGAA +
Preference number: 6 (lower is better)
Translates to: LTQGPHDGETLC*SALVGPQQFQE
Trigger: TTCCTGGAACTGCTGAGGTCCCACCAGAGCCGACCAGCAAAGTGTCTCACCATCATGTGGGCCCTGGGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000475258.5
CDS CAA 72 bp CGATCCAGGTATGTGATGGCAAAGGGAGACAGAGACTaGATGCCCAGCACAGGCAGCATGATCCCCAGCCAC +
Preference number: 6 (lower is better)
Translates to: RSRYVMAKGDRD*MPSTGSMIPSH
Trigger: GTGGCTGGGGATCATGCTGCCTGTGCTGGGCATCAAGTCTCTGTCTCCCTTTGCCATCACATACCTGGATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000425720.5
ENST00000435172.6
ENST00000460904.1
ENST00000475258.5
CDS GCA 72 bp CCACACTTTCAGTCCCTCGGTGAGGTTGGCAAAACCTaGTTGACCCAGGGCCCACATGATGGTGAGACACTT +
Preference number: 6 (lower is better)
Translates to: PHFQSLGEVGKT*LTQGPHDGETL
Trigger: AAGTGTCTCACCATCATGTGGGCCCTGGGTCAAGCAGGTTTTGCCAACCTCACCGAGGGACTGAAAGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000425720.5
ENST00000435172.6
ENST00000460904.1
ENST00000475258.5
CDS GCA 72 bp GTAGGTATGCAGGGTGGAATCCGGCTTTGCTCCAAATaGCAGCACTTTCAGTCGGGGGTAGAGCTGACACAG +
Preference number: 6 (lower is better)
Translates to: VGMQGGIRLCSK*QHFQSGVELTQ
Trigger: CTGTGTCAGCTCTACCCCCGACTGAAAGTGCTGGCATTTGGAGCAAAGCCGGATTCCACCCTGCATACCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000425720.5
ENST00000435172.6
ENST00000460904.1
ENST00000475258.5
CDS CCA 72 bp ACCTCAGCAGTTCCAGGAACTTGCCTAGGTTTGCCGTaGCAATCTTGGGCTTGTCTTGCAGGATGGCCTGGA +
Preference number: 6 (lower is better)
Translates to: TSAVPGTCLGLP*QSWACLAGWPG
Trigger: TCCAGGCCATCCTGCAAGACAAGCCCAAGATTGCCACGGCAAACCTAGGCAAGTTCCTGGAACTGCTGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000475258.5
CDS CCA 72 bp CTTTGTCAGCAGATAGGGACCGCTACAGCTGACCCCTaGGGAAGGAGAAAAAGCCTCCCACCATATCCTCAC +
Preference number: 6 (lower is better)
Translates to: LCQQIGTATADP*GRRKSLPPYPH
Trigger: GTGAGGATATGGTGGGAGGCTTTTTCTCCTTCCCCAGGGGTCAGCTGTAGCGGTCCCTATCTGCTGACAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460904.1
CDS CAA 72 bp CACTTTCAGTCCCTCGGTGAGGTTGGCAAAACCTGCTaGACCCAGGGCCCACATGATGGTGAGACACTTTGC +
Preference number: 6 (lower is better)
Translates to: HFQSLGEVGKTC*TQGPHDGETLC
Trigger: GCAAAGTGTCTCACCATCATGTGGGCCCTGGGTCAAGCAGGTTTTGCCAACCTCACCGAGGGACTGAAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000425720.5
ENST00000435172.6
ENST00000475258.5
CDS CAA 90 bp TTCTGGTTTTGGTTGGGAGGAGTTGCCACCTTCTTTGGCTGCTTCTaGTTCCCTGGTTTCTTAGGTTCCACAGCAGGGGGTGGGACCTGC +
Preference number: 6 (lower is better)
Translates to: FWFWLGGVATFFGCF*FPGFLGSTAGGGTC
Trigger: GCAGGTCCCACCCCCTGCTGTGGAACCTAAGAAACCAGGGAACAAGAAGCAGCCAAAGAAGGTGGCAACTCCTCCCAACCAAAACCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000478980.1
ENST00000495312.1
CDS TCA 72 bp CAGGGGGTGGGACCTGCTCCTTATTCTGCCGCTTCATaGTATTCTCAAAGCCCCGCTCATAAAGGGTGCTTG +
Preference number: 6 (lower is better)
Translates to: QGVGPAPYSAAS*YSQSPAHKGCL
Trigger: CAAGCACCCTTTATGAGCGGGGCTTTGAGAATATCATGAAGCGGCAGAATAAGGAGCAGGTCCCACCCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000478980.1
ENST00000495312.1
CDS TCA 72 bp ACTTTCAGTCCCTCGGTGAGGTTGGCAAAACCTGCTTaGCCCAGGGCCCACATGATGGTGAGACACTTTGCT +
Preference number: 6 (lower is better)
Translates to: TFSPSVRLAKPA*PRAHMMVRHFA
Trigger: AGCAAAGTGTCTCACCATCATGTGGGCCCTGGGTCAAGCAGGTTTTGCCAACCTCACCGAGGGACTGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000425720.5
ENST00000435172.6
ENST00000475258.5
CDS TCA 72 bp CCATTTGTCAGCGGTGAGCCCAGGCCCCAGGTCCACTaGCTCCTAACTTCCTCCACACTTTCCAAAAAGTGT +
Preference number: 6 (lower is better)
Translates to: PFVSGEPRPQVH*LLTSSTLSKKC
Trigger: ACACTTTTTGGAAAGTGTGGAGGAAGTTAGGAGTCAGTGGACCTGGGGCCTGGGCTCACCGCTGACAAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475258.5
CDS GCA 72 bp GAAGCGGCCCTGCTTCTGGTTTTGGTTGGGAGGAGTTaGCACCTTCTTTGGCTGCTTCTTGTTCCCTGGTTT +
Preference number: 6 (lower is better)
Translates to: EAALLLVLVGRS*HLLWLLLVPWF
Trigger: AAACCAGGGAACAAGAAGCAGCCAAAGAAGGTGGCAACTCCTCCCAACCAAAACCAGAAGCAGGGCCGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000478980.1
ENST00000495312.1
CDS GCA 72 bp CCAGAGAACACACTCTGGCTCTTGTCCAGTTCCTTCTaGAGGTCTGCCACATCCAGAGCTTTCAGTGCTTCC +
Preference number: 6 (lower is better)
Translates to: PENTLWLLSSSF*RSATSRAFSAS
Trigger: GGAAGCACTGAAAGCTCTGGATGTGGCAGACCTGCAGAAGGAACTGGACAAGAGCCAGAGTGTGTTCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000495312.1
CDS GCA 72 bp AGAAGGGAAGTAGGTATGCAGGGTGGAATCCGGCTTTaGTCCAAATGCCAGCACTTTCAGTCGGGGGTAGAG +
Preference number: 6 (lower is better)
Translates to: RREVGMQGGIRL*SKCQHFQSGVE
Trigger: CTCTACCCCCGACTGAAAGTGCTGGCATTTGGAGCAAAGCCGGATTCCACCCTGCATACCTACTTCCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000425720.5
ENST00000435172.6
ENST00000460904.1
ENST00000475258.5
CDS CCA 72 bp GTTCCAGGAACTTGCCTAGGTTTGCCGTGGCAATCTTaGGCTTGTCTTGCAGGATGGCCTGGATACAGATGC +
Preference number: 6 (lower is better)
Translates to: VPGTCLGLPWQS*ACLAGWPGYRC
Trigger: GCATCTGTATCCAGGCCATCCTGCAAGACAAGCCCAAGATTGCCACGGCAAACCTAGGCAAGTTCCTGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000475258.5
CDS CCA 72 bp CACATGATGGTGAGACACTTTGCTGGTCGGCTCTGGTaGGACCTCAGCAGTTCCAGGAACTTGCCTAGGTTT +
Preference number: 6 (lower is better)
Translates to: HMMVRHFAGRLW*DLSSSRNLPRF
Trigger: AAACCTAGGCAAGTTCCTGGAACTGCTGAGGTCCCACCAGAGCCGACCAGCAAAGTGTCTCACCATCATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000475258.5
CDS CCA 72 bp TCCCAAGATGGTCATCCCTCCCGTGCCCCTTTCACCTaGTGTCTTATCCAGCTCTTGCAACATGGTGAACAG +
Preference number: 6 (lower is better)
Translates to: SQDGHPSRAPFT*CLIQLLQHGEQ
Trigger: CTGTTCACCATGTTGCAAGAGCTGGATAAGACACCAGGTGAAAGGGGCACGGGAGGGATGACCATCTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475258.5
CDS CAA 90 bp TGGACAGGAAAGAAGGGAAGTAGGTATGCAGGGTGGAATCCGGCTTaGCTCCAAATGCCAGCACTTTCAGTCGGGGGTAGAGCTGACACA +
Preference number: 6 (lower is better)
Translates to: WTGKKGSRYAGWNPA*LQMPALSVGGRADT
Trigger: TGTGTCAGCTCTACCCCCGACTGAAAGTGCTGGCATTTGGAGCAAAGCCGGATTCCACCCTGCATACCTACTTCCCTTCTTTCCTGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000425720.5
ENST00000435172.6
ENST00000460904.1
ENST00000475258.5
CDS TCA 72 bp TTGGAGCCTAGGCTCAGGCTTCAGGAAGCCTCAGGTTaGGGGTCTGCCCTTCTACTTACTAGCTATGACCTA +
Preference number: 6 (lower is better)
Translates to: LEPRLRLQEASG*GSALLLTSYDL
Trigger: TAGGTCATAGCTAGTAAGTAGAAGGGCAGACCCTCAACCTGAGGCTTCCTGAAGCCTGAGCCTAGGCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460665.1
CDS GCA 72 bp TCTTGGGCTTGTCTTGCAGGATGGCCTGGATACAGATaGGGTAACCATGTAGTGACTCCCCTGGAGAGATAC +
Preference number: 6 (lower is better)
Translates to: SWACLAGWPGYR*GNHVVTPLERY
Trigger: GTATCTCTCCAGGGGAGTCACTACATGGTTACCGCATCTGTATCCAGGCCATCCTGCAAGACAAGCCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475258.5
CDS CCA 72 bp GGTTTGCCGTGGCAATCTTGGGCTTGTCTTGCAGGATaGCCTGGATACAGATGCGGTAACCATGTAGTGACT +
Preference number: 6 (lower is better)
Translates to: GLPWQSWACLAG*PGYRCGNHVVT
Trigger: AGTCACTACATGGTTACCGCATCTGTATCCAGGCCATCCTGCAAGACAAGCCCAAGATTGCCACGGCAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000475258.5
CDS CAA 72 bp AGTTCCAGGAACTTGCCTAGGTTTGCCGTGGCAATCTaGGGCTTGTCTTGCAGGATGGCCTGGATACAGATG +
Preference number: 6 (lower is better)
Translates to: SSRNLPRFAVAI*GLSCRMAWIQM
Trigger: CATCTGTATCCAGGCCATCCTGCAAGACAAGCCCAAGATTGCCACGGCAAACCTAGGCAAGTTCCTGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000475258.5
CDS CAA 72 bp AAGAAGGGAAGTAGGTATGCAGGGTGGAATCCGGCTTaGCTCCAAATGCCAGCACTTTCAGTCGGGGGTAGA +
Preference number: 6 (lower is better)
Translates to: KKGSRYAGWNPA*LQMPALSVGGR
Trigger: TCTACCCCCGACTGAAAGTGCTGGCATTTGGAGCAAAGCCGGATTCCACCCTGCATACCTACTTCCCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000425720.5
ENST00000435172.6
ENST00000460904.1
ENST00000475258.5
CDS TCA 72 bp CCAGAATTCTGCTCCTGGGAAAACCAGCCCCTTATTTaGCTCCCTGTCTCTGACTTACCCTCTGAGAGAGAC +
Preference number: 6 (lower is better)
Translates to: PEFCSWENQPLI*LPVSDLPSERD
Trigger: GTCTCTCTCAGAGGGTAAGTCAGAGACAGGGAGTCAAATAAGGGGCTGGTTTTCCCAGGAGCAGAATTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469445.1
CDS TCA 72 bp TCTCACACCTACTCACATTATTTGGCATCCCAAACCTaGAATCTCCCATTTGTCAGCGGTGAGCCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: SHTYSHYLASQT*NLPFVSGEPRP
Trigger: GGGCCTGGGCTCACCGCTGACAAATGGGAGATTTCAGGTTTGGGATGCCAAATAATGTGAGTAGGTGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475258.5
CDS GCA 72 bp TCTTGGGCTTGTCTTGCAGGATGGCCTGGATACAGATaGGGTAACCATGTAGTGACTCCCCTGGTGTCTTAT +
Preference number: 6 (lower is better)
Translates to: SWACLAGWPGYR*GNHVVTPLVSY
Trigger: ATAAGACACCAGGGGAGTCACTACATGGTTACCGCATCTGTATCCAGGCCATCCTGCAAGACAAGCCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000435172.6
CDS GCA 72 bp TCTTGGGCTTGTCTTGCAGGATGGCCTGGATACAGATaGGGTAACCATGTAGTGACTCCCCATGAGTATGCT +
Preference number: 6 (lower is better)
Translates to: SWACLAGWPGYR*GNHVVTPHEYA
Trigger: AGCATACTCATGGGGAGTCACTACATGGTTACCGCATCTGTATCCAGGCCATCCTGCAAGACAAGCCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404032.7
CDS CCA 72 bp CTTGTTCCCTGGTTTCTTAGGTTCCACAGCAGGGGGTaGGACCTGCTCCTTATTCTGCCGCTTCATGATATT +
Preference number: 6 (lower is better)
Translates to: LVPWFLRFHSRG*DLLLILPLHDI
Trigger: AATATCATGAAGCGGCAGAATAAGGAGCAGGTCCCACCCCCTGCTGTGGAACCTAAGAAACCAGGGAACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000478980.1
ENST00000495312.1
CDS CCA 72 bp GTTGAGATAGCTGGCCAGGTCCTTCAACCATATGGATaGGTTTCCAGAGAACACACTCTGGCTCTTGTCCAG +
Preference number: 6 (lower is better)
Translates to: VEIAGQVLQPYG*VSREHTLALVQ
Trigger: CTGGACAAGAGCCAGAGTGTGTTCTCTGGAAACCCATCCATATGGTTGAAGGACCTGGCCAGCTATCTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000495312.1
CDS CAA 90 bp TCCTTCAACCATATGGATGGGTTTCCAGAGAACACACTCTGGCTCTaGTCCAGTTCCTTCTGCAGGTCTGCCACATCCAGAGCTTTCAGT +
Preference number: 6 (lower is better)
Translates to: SFNHMDGFPENTLWL*SSSFCRSATSRAFS
Trigger: ACTGAAAGCTCTGGATGTGGCAGACCTGCAGAAGGAACTGGACAAGAGCCAGAGTGTGTTCTCTGGAAACCCATCCATATGGTTGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000495312.1
CDS CAA 90 bp GAGGATCACAGAATGAGGCCCAGAAACATTCACAGTCACGATGATTaGAGACCAGCCCAAATCACCCATGGAAATCAGGACAGTGTGGGG +
Preference number: 6 (lower is better)
Translates to: EDHRMRPRNIHSHDD*RPAQITHGNQDSVG
Trigger: CCCCACACTGTCCTGATTTCCATGGGTGATTTGGGCTGGTCTCAAATCATCGTGACTGTGAATGTTTCTGGGCCTCATTCTGTGATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495312.1
CDS TCA 72 bp GCGTGGGTTCACTTAGAGGAGCTTGTAGCTTGTAGTTaGGATAGCTGGCCAGGTCCTTCAACCATATGGATG +
Preference number: 6 (lower is better)
Translates to: AWVHLEELVACS*DSWPGPSTIWM
Trigger: CATCCATATGGTTGAAGGACCTGGCCAGCTATCTCAACTACAAGCTACAAGCTCCTCTAAGTGAACCCACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000495312.1
CDS GCA 72 bp TGGTTTTGGTTGGGAGGAGTTGCCACCTTCTTTGGCTaGTTCTTGTTCCCTGGTTTCTTAGGTTCCACAGCA +
Preference number: 6 (lower is better)
Translates to: WFWLGGVATFFG*FLFPGFLGSTA
Trigger: TGCTGTGGAACCTAAGAAACCAGGGAACAAGAAGCAGCCAAAGAAGGTGGCAACTCCTCCCAACCAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000238788.14
ENST00000321326.11
ENST00000404032.7
ENST00000435172.6
ENST00000478980.1
ENST00000495312.1
CDS TCA 72 bp ACTGGGATCTGTTATACCACCCTTTTTGAATTTATTTaGACTTGTCTGAGCTTGAGGAAGCTGGAAGGACTT +
Preference number: 6 (lower is better)
Translates to: TGICYTTLFEFI*TCLSLRKLEGL
Trigger: AAGTCCTTCCAGCTTCCTCAAGCTCAGACAAGTTCAAATAAATTCAAAAAGGGTGGTATAACAGATCCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495312.1