Pregenerated sensors for TMEM209 (Homo sapiens)
Ensembl gene IDs: ENSG00000146842Ensembl transcript IDs: ENST00000397622.7, ENST00000462753.5, ENST00000467599.1, ENST00000471077.2, ENST00000471985.4, ENST00000473456.5, ENST00000479804.1
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTAGGCAGGAGAATTGCTTaGGCCTGGGAGGCAGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLGRRIA*AWEAEV Trigger: AACTTCTGCCTCCCAGGCTCAAGCAATTCTCCTGCC...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| 3UTR-3UTR GCA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTACTAAGATCGTGCCACTaGACTCCAGTCTGCGTTGAC | + |
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Preference number: 2 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLLRSCH*TPVCVD Trigger: GTCAACGCAGACTGGAGTGCAGTGGCACGATCTTAG...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| 3UTR-3UTR TCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAACGACTTCTGGTTCAGTaGAATAGTCTAAATGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: FFECGLWPNLQNAGETLKRLLVQ*NSLNVR Trigger: TCTGACATTTAGACTATTTCACTGAACCAGAAGTCG...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| 3UTR-3UTR TCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAAGGAATGGCACTATTTTaGGTCAATAAAAATCCGAAG | + |
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Preference number: 2 (lower is better) Translates to: FFECGLWPNLQNAGETLKGMALF*VNKNPK Trigger: CTTCGGATTTTTATTGACTCAAAATAGTGCCATTCC...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| 3UTR-3UTR CAA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAAGCACTCCAGTCTGCGTaGACAGAGACCCTCTCTAAA | + |
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Preference number: 3 (lower is better) Translates to: FFECGLWPNLQNAGETLKALQSA*TETLSK Trigger: TTTAGAGAGGGTCTCTGTCAACGCAGACTGGAGTGC...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| 3UTR-3UTR CAA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTAGGGCTTTGGCCTAACTaGCAGAATGCTGGGGAAACA | + |
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Preference number: 3 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLGLWPN*QNAGET Trigger: TGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCC...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| 3UTR-3UTR CAA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTAGTTAATCTCATTTCTTaGAATGTGGGCTTTGGCCTA | + |
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Preference number: 3 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLVNLIS*NVGFGL Trigger: TAGGCCAAAGCCCACATTCAAAGAAATGAGATTAAC...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR GCA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTAGGGTGTGCCTCCCCCTaGATCATGTCCTCTGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLGCASP*IMSSGR Trigger: CCGGCCAGAGGACATGATGCAGGGGGAGGCACACCC...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR GCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAAGGAAGCACTAGGGTGTaGCTCCCCCTGCATCATGTC | + |
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Preference number: 4 (lower is better) Translates to: FFECGLWPNLQNAGETLKGSTRV*LPLHHV Trigger: GACATGATGCAGGGGGAGGCACACCCTAGTGCTTCC...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR TCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAACCCACTTTCGTCCTTTaGAGTCGCCACCTCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FFECGLWPNLQNAGETLKPTFVL*SRHLCS Trigger: GGAACAGAGGTGGCGACTTCAAAGGACGAAAGTGGG...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR GCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAAGGGAGGGATTTGGGTTaGTGCCAGATCATGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FFECGLWPNLQNAGETLKGRDLG*CQIMWR Trigger: CCTCCACATGATCTGGCAGCAACCCAAATCCCTCCC...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR CCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAAGGAGCGGGAGGGATTTaGGTTGCTGCCAGATCATGT | + |
|
Preference number: 4 (lower is better) Translates to: FFECGLWPNLQNAGETLKGAGGI*VAARSC Trigger: ACATGATCTGGCAGCAACCCAAATCCCTCCCGCTCC...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR TCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAACATGACGCTGGTAGATaGGCTCATAATGGGGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: FFECGLWPNLQNAGETLKHDAGR*AHNGEG Trigger: ACCCTCCCCATTATGAGCTCATCTACCAGCGTCATG...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR GCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAAAGGGATTTGGGTTGCTaGCAGATCATGTGGAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: FFECGLWPNLQNAGETLKRDLGC*QIMWRR Trigger: ACGCCTCCACATGATCTGGCAGCAACCCAAATCCCT...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR GCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAAATTCATAGCCACTCTTaGCCAGACCTCTTCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FFECGLWPNLQNAGETLKIHSHS*PDLFCG Trigger: GCCGCAGAAGAGGTCTGGGCAAGAGTGGCTATGAAT...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR TCA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTAACTCTGACCCTGAATTaGAGGGGAAGGTGGAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLTLTLN*RGRWSG Trigger: CCCGCTCCACCTTCCCCTTCAATTCAGGGTCAGAGT...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR TCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAAGTTGTAGACGGTAGGTaGAGAACGGTAGCGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: FFECGLWPNLQNAGETLKVVDGR*RTVARS Trigger: AGATCTCGCTACCGTTCTTCACCTACCGTCTACAAC...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR GCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAAGGCTATAAGAACCACTaGCACCTGAGGACAGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: FFECGLWPNLQNAGETLKGYKNH*HLRTDL Trigger: AAGGTCTGTCCTCAGGTGGCAGTGGTTCTTATAGCC...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR CCA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTACTGCATCATGTCCTCTaGCCGGAAAACGCAGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLLHHVL*PENAGS Trigger: CGAGCCTGCGTTTTCCGGCCAGAGGACATGATGCAG...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR CCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAATGCTGCCAGATCATGTaGAGGCGTAGTCTGTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: FFECGLWPNLQNAGETLKCCQIM*RRSLYN Trigger: GTTGTACAGACTACGCCTCCACATGATCTGGCAGCA...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR CCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAAATCTTTGTTAGCACATaGGGCCTGAGACCTACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FFECGLWPNLQNAGETLKIFVST*GLRPTG Trigger: GCCTGTAGGTCTCAGGCCCCATGTGCTAACAAAGAT...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR TCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAACAAAGTCTGAGGGAATaGCAAAACGGGATGCACATC | + |
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Preference number: 4 (lower is better) Translates to: FFECGLWPNLQNAGETLKQSLRE*QNGMHI Trigger: GATGTGCATCCCGTTTTGTCATTCCCTCAGACTTTG...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR TCA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTATCATACAGCTGGTGGTaGACTTGGGACTGGTACTGG | + |
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Preference number: 4 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLSYSWW*TWDWYW Trigger: CCAGTACCAGTCCCAAGTTCACCACCAGCTGTATGA...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR GCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAACCCAGCTTAACCCTATaGTGTTTCTCCTCTTCACTT | + |
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Preference number: 4 (lower is better) Translates to: FFECGLWPNLQNAGETLKPSLTL*CFSSSL Trigger: AAGTGAAGAGGAGAAACAGCATAGGGTTAAGCTGGG...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR CCA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTAACTTGGGACTGGTACTaGGCGAACGAGAAGGGCTAT | + |
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Preference number: 4 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLTWDWY*ANEKGY Trigger: ATAGCCCTTCTCGTTCGCCCAGTACCAGTCCCAAGT...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR CCA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTATCCACTGCTCTCCACTaGTCCAACAGTGGTAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLSTALH*SNSGRV Trigger: TACCCTACCACTGTTGGACCAGTGGAGAGCAGTGGA...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR CCA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTAAGGAGAGGTAGAATCTaGGCTCCCCAGCTTAACCCT | + |
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Preference number: 4 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLRRGRI*APQLNP Trigger: AGGGTTAAGCTGGGGAGCCCAGATTCTACCTCTCCT...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR TCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAACTCATACAACCTCCCTaGGATAGTTCTTTGATCCTT | + |
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Preference number: 4 (lower is better) Translates to: FFECGLWPNLQNAGETLKLIQPP*DSSLIL Trigger: AAGGATCAAAGAACTATCTCAGGGAGGTTGTATGAG...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR TCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAATCTCCCAAGCATTCCTaGCTCTTTGGTCTTTATGAT | + |
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Preference number: 4 (lower is better) Translates to: FFECGLWPNLQNAGETLKSPKHS*LFGLYD Trigger: ATCATAAAGACCAAAGAGTCAGGAATGCTTGGGAGA...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR GCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAAAACCCTAAAAGTGTTTaGTGTCCAGGACTAACAACC | + |
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Preference number: 4 (lower is better) Translates to: FFECGLWPNLQNAGETLKNPKSV*CPGLTT Trigger: GGTTGTTAGTCCTGGACAGCAAACACTTTTAGGGTT...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR CCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAATTTGAATGTGGGCTTTaGCCTAACTTGCAGAATGCT | + |
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Preference number: 4 (lower is better) Translates to: FFECGLWPNLQNAGETLKFECGL*PNLQNA Trigger: AGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAA...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR TCA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTAACTTATTATAACCACTaGCGGGCGAGTAGGTCACTC | + |
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Preference number: 4 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLTYYNH*RASRSL Trigger: GAGTGACCTACTCGCCCGTCAGTGGTTATAATAAGT...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR TCA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTATCTGTTCCATCGAAATaGGCTCATACAACCTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLSVPSK*AHTTSL Trigger: CAGGGAGGTTGTATGAGCTCATTTCGATGGAACAGA...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR CCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAAATTATTTCTGCCCTTTaGCAGGTTGTATACATGACG | + |
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Preference number: 4 (lower is better) Translates to: FFECGLWPNLQNAGETLKIISAL*QVVYMT Trigger: CGTCATGTATACAACCTGCCAAAGGGCAGAAATAAT...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR TCA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTAGTCTCATCTGTGTGCTaGCAGACTCAATCTCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLVSSVC*QTQSLE Trigger: TTCAAGAGATTGAGTCTGTCAGCACACAGATGAGAC...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR TCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAACAGGTTTACATAAGATaGTGGAAGCAGTCTCTAATA | + |
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Preference number: 4 (lower is better) Translates to: FFECGLWPNLQNAGETLKQVYIR*WKQSLI Trigger: TATTAGAGACTGCTTCCATCATCTTATGTAAACCTG...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR CCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAAAACAACCAGACTTGTTaGTGCCACAGTATATTTGAA | + |
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Preference number: 4 (lower is better) Translates to: FFECGLWPNLQNAGETLKNNQTC*CHSIFE Trigger: TTCAAATATACTGTGGCACCAACAAGTCTGGTTGTT...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR CCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAAAACATCTGGTTTATTTaGTGTCTGAACAAAGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: FFECGLWPNLQNAGETLKNIWFI*CLNKVL Trigger: CAGCACTTTGTTCAGACACCAAATAAACCAGATGTT...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR TCA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTAACTGTATTCAAAGTCTaGGGGAATGACAAAACGGGA | + |
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Preference number: 4 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLTVFKV*GNDKTG Trigger: TCCCGTTTTGTCATTCCCTCAGACTTTGAATACAGT...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR GCA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTAAAGGCTGAAGAGAGATaGAAGGGCAAGCTCAATATA | + |
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Preference number: 4 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLKAEER*KGKLNI Trigger: TATATTGAGCTTGCCCTTGCATCTCTCTTCAGCCTT...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR GCA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAAAACCAGACTTGTTGGTaGCACAGTATATTTGAAATA | + |
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Preference number: 4 (lower is better) Translates to: FFECGLWPNLQNAGETLKNQTCW*HSIFEI Trigger: TATTTCAAATATACTGTGGCACCAACAAGTCTGGTT...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR CCA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTAGATGTGGAGGTAATCTaGAATCAAGGTAGGTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLDVEVI*NQGRCK Trigger: TTTGCACCTACCTTGATTCCAGATTACCTCCACATC...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR TCA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTAGTAAGGTCTAGATACTaGACGATTGTGTTCAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLVRSRY*TIVFKV Trigger: GACTTTGAACACAATCGTTCAGTATCTAGACCTTAC...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR TCA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTAGTCCATGAATCCATATaGTCAAGAAGTTGTCTATTC | + |
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Preference number: 4 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLVHESI*SRSCLF Trigger: GAATAGACAACTTCTTGATCATATGGATTCATGGAC...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR TCA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTAGGAATGGCACTATTTTaGGTCAATAAAAATCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLGMALF*VNKNPK Trigger: CTTCGGATTTTTATTGACTCAAAATAGTGCCATTCC...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR GCA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTAAATGACAAAACGGGATaGACATCTAACACTGATACA | + |
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Preference number: 4 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLNDKTG*TSNTDT Trigger: TGTATCAGTGTTAGATGTGCATCCCGTTTTGTCATT...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR GCA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTAGAAACATATTATTTCTaGCCTTTGGCAGGTTGTATA | + |
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Preference number: 4 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLETYYF*PLAGCI Trigger: TATACAACCTGCCAAAGGGCAGAAATAATATGTTTC...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR CCA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTACTCATTTGTAACATCTaGTTTATTTGGTGTCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLLICNI*FIWCLN Trigger: GTTCAGACACCAAATAAACCAGATGTTACAAATGAG...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS CCA 90 bp | CCCCGCGTCCCAATTTCCCAGTCCAGAGCTTCCCTCCCCGGCTCCTaGGCACGAACTTCAGCAACCCTATTGCTTCTTTCTTCCCTTCCC | + |
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Preference number: 5 (lower is better) Translates to: PRVPISQSRASLPGS*ARTSATLLLLSSLP Trigger: GGGAAGGGAAGAAAGAAGCAATAGGGTTGCTGAAGTTCGTGCCCAGGAGCCGGGGAGGGAAGCTCTGGACTGGGAAATTGGGACGCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000462753.5 ENST00000471077.2 |
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| CDS TCA 90 bp | GACGGGCGAGTAGGTCACTCCAGGGCTATAAGAACCACTGCCACCTaGGGACAGACCTTGCAGCTGAGGGCTGTAACCAGTCATACAGCT | + |
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Preference number: 5 (lower is better) Translates to: DGRVGHSRAIRTTAT*GQTLQLRAVTSHTA Trigger: AGCTGTATGACTGGTTACAGCCCTCAGCTGCAAGGTCTGTCCTCAGGTGGCAGTGGTTCTTATAGCCCTGGAGTGACCTACTCGCCCGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000397622.7 ENST00000462753.5 ENST00000473456.5 |
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| CDS TCA 90 bp | ACAGACCTTGCAGCTGAGGGCTGTAACCAGTCATACAGCTGGTGGTaGACTTGGGACTGGTACTGGGCGAACGAGAAGGGCTATAACTCA | + |
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Preference number: 5 (lower is better) Translates to: TDLAAEGCNQSYSWW*TWDWYWANEKGYNS Trigger: TGAGTTATAGCCCTTCTCGTTCGCCCAGTACCAGTCCCAAGTTCACCACCAGCTGTATGACTGGTTACAGCCCTCAGCTGCAAGGTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000397622.7 ENST00000462753.5 ENST00000473456.5 |
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| CDS TCA 90 bp | TTACAGCAGAATCGGTGGGCAGGTCTGTATCCCACTTTCGTCCTTTaGAGTCGCCACCTCTGTTCCATCGAAATGAGCTCATACAACCTC | + |
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Preference number: 5 (lower is better) Translates to: LQQNRWAGLYPTFVL*SRHLCSIEMSSYNL Trigger: GAGGTTGTATGAGCTCATTTCGATGGAACAGAGGTGGCGACTTCAAAGGACGAAAGTGGGATACAGACCTGCCCACCGATTCTGCTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479804.1 |
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| CDS-3UTR CAA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAACAGCTGGTGGTGAACTaGGGACTGGTACTGGGCGAA | + |
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Preference number: 5 (lower is better) Translates to: FFECGLWPNLQNAGETLKQLVVN*GLVLGE Trigger: TTCGCCCAGTACCAGTCCCAAGTTCACCACCAGCTG...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR CAA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAAGACCTCTTCTGCGGCTaGTTTAGAGCTGAGATCGGC | + |
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Preference number: 5 (lower is better) Translates to: FFECGLWPNLQNAGETLKDLFCG*FRAEIG Trigger: GCCGATCTCAGCTCTAAACAAGCCGCAGAAGAGGTC...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS GCA 90 bp | GGAGGCGTAGTCTGTACAACAGCTGTTTTCAACCCTAAAAGTGTTTaGTGTCCAGGACTAACAACCAGACTTGTTGGTGCCACAGTATAT | + |
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Preference number: 5 (lower is better) Translates to: GGVVCTTAVFNPKSV*CPGLTTRLVGATVY Trigger: ATATACTGTGGCACCAACAAGTCTGGTTGTTAGTCCTGGACAGCAAACACTTTTAGGGTTGAAAACAGCTGTTGTACAGACTACGCCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000397622.7 ENST00000462753.5 ENST00000471985.4 ENST00000473456.5 |
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| CDS-3UTR CAA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAAGGGCTTTGGCCTAACTaGCAGAATGCTGGGGAAACA | + |
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Preference number: 5 (lower is better) Translates to: FFECGLWPNLQNAGETLKGLWPN*QNAGET Trigger: TGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCC...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR CAA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTACGGGAGGGATTTGGGTaGCTGCCAGATCATGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLREGFG*LPDHVE Trigger: CTCCACATGATCTGGCAGCAACCCAAATCCCTCCCG...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR CAA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTATGGAGCGGGAGGGATTaGGGTTGCTGCCAGATCATG | + |
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Preference number: 5 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLWSGRD*GCCQIM Trigger: CATGATCTGGCAGCAACCCAAATCCCTCCCGCTCCA...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR CAA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTATCCCACTTTCGTCCTTaGAAGTCGCCACCTCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLSHFRP*KSPPLF Trigger: GAACAGAGGTGGCGACTTCAAAGGACGAAAGTGGGA...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR CAA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTAGCACTCCAGTCTGCGTaGACAGAGACCCTCTCTAAA | + |
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Preference number: 5 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLALQSA*TETLSK Trigger: TTTAGAGAGGGTCTCTGTCAACGCAGACTGGAGTGC...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS TCA 90 bp | GGACAACCCATTCGTCTCATCTGTGTGCTGACAGACTCAATCTCTTaGACAAGTGGCACTAATATTGTCTCATTGATCCAATTTCTAAAT | + |
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Preference number: 5 (lower is better) Translates to: GQPIRLICVLTDSIS*TSGTNIVSLIQFLN Trigger: ATTTAGAAATTGGATCAATGAGACAATATTAGTGCCACTTGTTCAAGAGATTGAGTCTGTCAGCACACAGATGAGACGAATGGGTTGTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000397622.7 ENST00000462753.5 ENST00000473456.5 |
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| CDS-3UTR CAA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAATATTATTTCTGCCCTTaGGCAGGTTGTATACATGAC | + |
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Preference number: 5 (lower is better) Translates to: FFECGLWPNLQNAGETLKYYFCP*AGCIHD Trigger: GTCATGTATACAACCTGCCAAAGGGCAGAAATAATA...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS TCA 90 bp | GGCAAGCTCAATATACCAGAGGGGCCAGTATGTCACATTGTAGTATaGACTAATCAATTTTCCAGTCATTTCAGTATATATCATTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: GKLNIPEGPVCHIVV*TNQFSSHFSIYHSS Trigger: GCTGGAATGATATATACTGAAATGACTGGAAAATTGATTAGTTCATACTACAATGTGACATACTGGCCCCTCTGGTATATTGAGCTTGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000397622.7 ENST00000462753.5 ENST00000471985.4 ENST00000473456.5 |
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| CDS-3UTR CAA 90 bp | TTCTTTGAATGTGGGCTTTGGCCTAACTTGCAGAATGCTGGGGAAACATTAAAACATATGATCAAGAAGTaGTCTATTCATAGCCACTCT | + |
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Preference number: 5 (lower is better) Translates to: FFECGLWPNLQNAGETLKHMIKK*SIHSHS Trigger: AGAGTGGCTATGAATAGACAACTTCTTGATCATATG...TTTTAATGTTTCCCCAGCATTCTGCAAGTTAGGCCAAAGCCCACATTCAAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR CAA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTATTTAACCAGGGCAGCTaGTTTCAAGCTAGTAATACT | + |
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Preference number: 5 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLFNQGS*FQASNT Trigger: AGTATTACTAGCTTGAAACAAGCTGCCCTGGTTAAA...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS-3UTR CAA 90 bp | TTTCAGCTGTTTCCAGGTTTACATAAGATGATGGAAGCAGTCTCTAATATGTTAGTTTCTTTTCTCATCTaGATGGTTCTGTCAATAAGG | + |
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Preference number: 5 (lower is better) Translates to: FQLFPGLHKMMEAVSNMLVSFLI*MVLSIR Trigger: CCTTATTGACAGAACCATCAAGATGAGAAAAGAAAC...TAACATATTAGAGACTGCTTCCATCATCTTATGTAAACCTGGAAACAGCTGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397622.7 |
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| CDS TCA 72 bp | GCAGCTGAGGGCTGTAACCAGTCATACAGCTGGTGGTaGACTTGGGACTGGTACTGGGCGAACGAGAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: AAEGCNQSYSWW*TWDWYWANEKG Trigger: GCCCTTCTCGTTCGCCCAGTACCAGTCCCAAGTTCACCACCAGCTGTATGACTGGTTACAGCCCTCAGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000397622.7 ENST00000462753.5 ENST00000473456.5 |
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| CDS GCA 72 bp | CTTGATGGTTCTGTCAATAAGGGAAGCACTAGGGTGTaGCTCCCCCTGCATCATGTCCTCTGGCCGGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: LDGSVNKGSTRV*LPLHHVLWPEN Trigger: GTTTTCCGGCCAGAGGACATGATGCAGGGGGAGGCACACCCTAGTGCTTCCCTTATTGACAGAACCATCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000397622.7 ENST00000473456.5 |
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| CDS CCA 72 bp | AGAACGGTAGCGAGATCTCAATCCACTGCTCTCCACTaGTCCAACAGTGGTAGGGTACGGAGAAGGAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: RTVARSQSTALH*SNSGRVRRRRR Trigger: TCTCCTCCTTCTCCGTACCCTACCACTGTTGGACCAGTGGAGAGCAGTGGATTGAGATCTCGCTACCGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000397622.7 ENST00000462753.5 ENST00000473456.5 |
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| CDS TCA 72 bp | AGAAGGGCTATAACTCAACACACTCTGACCCTGAATTaGAGGGGAAGGTGGAGCGGGAGGGATTTGGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: RRAITQHTLTLN*RGRWSGRDLGC Trigger: GCAACCCAAATCCCTCCCGCTCCACCTTCCCCTTCAATTCAGGGTCAGAGTGTGTTGAGTTATAGCCCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000397622.7 ENST00000462753.5 ENST00000471985.4 ENST00000473456.5 |
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| CDS GCA 72 bp | CTTGATGGTTCTGTCAATAAGGGAAGCACTAGGGTGTaGCTCCCCCTGCATCGTGCAAAACTTGTTCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: LDGSVNKGSTRV*LPLHRAKLVPA Trigger: CGCTGGAACAAGTTTTGCACGATGCAGGGGGAGGCACACCCTAGTGCTTCCCTTATTGACAGAACCATCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000462753.5 |
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| CDS CAA 72 bp | GAGAAGGGCTATAACTCAACACACTCTGACCCTGAATaGAAGGGGAAGGTGGAGCGGGAGGGATTTGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: EKGYNSTHSDPE*KGKVEREGFGL Trigger: CAACCCAAATCCCTCCCGCTCCACCTTCCCCTTCAATTCAGGGTCAGAGTGTGTTGAGTTATAGCCCTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000397622.7 ENST00000462753.5 ENST00000471985.4 ENST00000473456.5 |
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| CDS CAA 72 bp | GAATCGGTGGGCAGGTCTGTATCCCACTTTCGTCCTTaGAAGTCGCCACCTCTGTTCCATCGAAATGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: ESVGRSVSHFRP*KSPPLFHRNEL Trigger: GAGCTCATTTCGATGGAACAGAGGTGGCGACTTCAAAGGACGAAAGTGGGATACAGACCTGCCCACCGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000397622.7 ENST00000462753.5 ENST00000473456.5 ENST00000479804.1 |
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| CDS TCA 72 bp | AATCGGTGGGCAGGTCTGTATCCCACTTTCGTCCTTTaGAGTCGCCACCTCTGTTCCATCGAAATGAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: NRWAGLYPTFVL*SRHLCSIEMSS Trigger: TGAGCTCATTTCGATGGAACAGAGGTGGCGACTTCAAAGGACGAAAGTGGGATACAGACCTGCCCACCGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000397622.7 ENST00000462753.5 ENST00000473456.5 ENST00000479804.1 |
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| CDS CAA 90 bp | CTTACAGCAGAATCGGTGGGCAGGTCTGTATCCCACTTTCGTCCTTaGAAGTCGCCACCTCTGTTCCATCGAAATGAGCTCATACAACCT | + |
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Preference number: 6 (lower is better) Translates to: LTAESVGRSVSHFRP*KSPPLFHRNELIQP Trigger: AGGTTGTATGAGCTCATTTCGATGGAACAGAGGTGGCGACTTCAAAGGACGAAAGTGGGATACAGACCTGCCCACCGATTCTGCTGTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479804.1 |
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| CDS CAA 90 bp | ATGATAGCAGAATCGGTGGGCAGGTCTGTATCCCACTTTCGTCCTTaGAAGTCGCCACCTCTGTTCCATCGAAATGAGCTCATACAACCT | + |
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Preference number: 6 (lower is better) Translates to: MIAESVGRSVSHFRP*KSPPLFHRNELIQP Trigger: AGGTTGTATGAGCTCATTTCGATGGAACAGAGGTGGCGACTTCAAAGGACGAAAGTGGGATACAGACCTGCCCACCGATTCTGCTATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000397622.7 ENST00000462753.5 ENST00000473456.5 |
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| CDS GCA 72 bp | GGAGAGGTAGAATCTGGGCTCCCCAGCTTAACCCTATaGTGTTTCTCCTCTTCACTTCTGAGAAAAGTATCC | + |
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Preference number: 6 (lower is better) Translates to: GEVESGLPSLTL*CFSSSLLRKVS Trigger: GGATACTTTTCTCAGAAGTGAAGAGGAGAAACAGCATAGGGTTAAGCTGGGGAGCCCAGATTCTACCTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000397622.7 ENST00000462753.5 ENST00000473456.5 |
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| CDS CCA 72 bp | TTTAGAGCTGAGATCGGCTTCATCTTTGTTAGCACATaGGGCCTGAGACCTACAGGCAAGCTGATACTGAAA | + |
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Preference number: 6 (lower is better) Translates to: FRAEIGFIFVST*GLRPTGKLILK Trigger: TTTCAGTATCAGCTTGCCTGTAGGTCTCAGGCCCCATGTGCTAACAAAGATGAAGCCGATCTCAGCTCTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000397622.7 ENST00000462753.5 ENST00000473456.5 |
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| CDS CAA 72 bp | CAAAGTCGGAATGAGAGGCGCTTTAACCAGGGCAGCTaGTTTCAAGCTAGTAATACTAGCCTCTCCTATCTG | + |
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Preference number: 6 (lower is better) Translates to: QSRNERRFNQGS*FQASNTSLSYL Trigger: CAGATAGGAGAGGCTAGTATTACTAGCTTGAAACAAGCTGCCCTGGTTAAAGCGCCTCTCATTCCGACTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000397622.7 ENST00000462753.5 ENST00000467599.1 |
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| CDS TCA 72 bp | GTAGCTCTGGACAACCCATTCGTCTCATCTGTGTGCTaGCAGACTCAATCTCTTGAACAAGTGGCACTAATA | + |
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Preference number: 6 (lower is better) Translates to: VALDNPFVSSVC*QTQSLEQVALI Trigger: TATTAGTGCCACTTGTTCAAGAGATTGAGTCTGTCAGCACACAGATGAGACGAATGGGTTGTCCAGAGCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000397622.7 ENST00000462753.5 ENST00000467599.1 ENST00000473456.5 |
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| CDS GCA 72 bp | GTCTGTACAACAGCTGTTTTCAACCCTAAAAGTGTTTaGTGTCCAGGACTAACAACCAGACTTGTTGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: VCTTAVFNPKSV*CPGLTTRLVGA Trigger: GGCACCAACAAGTCTGGTTGTTAGTCCTGGACAGCAAACACTTTTAGGGTTGAAAACAGCTGTTGTACAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000397622.7 ENST00000462753.5 ENST00000471985.4 ENST00000473456.5 |
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