RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM208 (Homo sapiens)

Ensembl gene IDs: ENSG00000168701

Ensembl transcript IDs: ENST00000304800.14, ENST00000561586.5, ENST00000562235.5, ENST00000563168.1, ENST00000563271.5, ENST00000563426.5, ENST00000563953.5, ENST00000564087.2, ENST00000564649.1, ENST00000565201.1, ENST00000566486.1, ENST00000567193.5

Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGCTTCATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTaGTCTGGTGCTGGGGTGCCACTGTCTGCAGTGAACCAGGGGCCC +
Preference number: 1 (lower is better)
Translates to: RFICRRSCRRCRFSL*SGAGVPLSAVNQGP
Trigger: GGGCCCCTGGTTCACTGCAGACAGTGGCACCCCAGCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATGAAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
3UTR CCA 90 bp CATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTaGTGCTGGGGTGCCACTGTCTGCAGTGAACCAGGGGCCCAGCAC +
Preference number: 1 (lower is better)
Translates to: HLPPLLSALPFLIVL*CWGATVCSEPGAQH
Trigger: GTGCTGGGCCCCTGGTTCACTGCAGACAGTGGCACCCCAGCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
3UTR GCA 90 bp TTGGCCCCTGGACTAGACCCTCATTGCTCCAGGCATGAGGGGCTGTaGACCCTGACAGAGCCACCCAGGGCCAGTGGCCTGTGGCCACAA +
Preference number: 1 (lower is better)
Translates to: LAPGLDPHCSRHEGL*TLTEPPRASGLWPQ
Trigger: TTGTGGCCACAGGCCACTGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCCAGGGGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
3UTR GCA 90 bp CTGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTGGTaGTGGGGTGCCACTGTCTGCAGTGAACCAGGGGCCCAGCACATT +
Preference number: 1 (lower is better)
Translates to: LPPLLSALPFLIVLW*WGATVCSEPGAQHI
Trigger: AATGTGCTGGGCCCCTGGTTCACTGCAGACAGTGGCACCCCAGCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
3UTR CCA 90 bp CCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTGGTGCTaGGGTGCCACTGTCTGCAGTGAACCAGGGGCCCAGCACATTCAC +
Preference number: 1 (lower is better)
Translates to: PPLLSALPFLIVLWC*GATVCSEPGAQHIH
Trigger: GTGAATGTGCTGGGCCCCTGGTTCACTGCAGACAGTGGCACCCCAGCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
3UTR TCA 90 bp GCCGTCAGGAGGCCACGGTCCTCCTCATTCTCCCCACCAGCCTGGTaGGCTATAGAGCTCCATCCGCAACTCAGCCAGGTCCCCGTAGTG +
Preference number: 1 (lower is better)
Translates to: AVRRPRSSSFSPPAW*AIELHPQLSQVPVV
Trigger: CACTACGGGGACCTGGCTGAGTTGCGGATGGAGCTCTATAGCTCACCAGGCTGGTGGGGAGAATGAGGAGGACCGTGGCCTCCTGACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564087.2
3UTR GCA 90 bp CCTCTCGTGCCCACTTTGCCCTTGGGCTGCAGAGGAATGATGAGATaGCGTCAGGAGGCCACGGTCCTCCTCATTCTCCCCACCAGCCTG +
Preference number: 1 (lower is better)
Translates to: PLVPTLPLGCRGMMR*RQEATVLLILPTSL
Trigger: CAGGCTGGTGGGGAGAATGAGGAGGACCGTGGCCTCCTGACGGCATCTCATCATTCCTCTGCAGCCCAAGGGCAAAGTGGGCACGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564087.2
3UTR TCA 90 bp GCCGTTTCTCATTGTGCTCTGGTGCTGGGGTGCCACTGTCTGCAGTaGACCAGGGGCCCAGCACATTCACCCACAGGAGGTAAAGGGCCC +
Preference number: 1 (lower is better)
Translates to: AVSHCALVLGCHCLQ*TRGPAHSPTGGKGP
Trigger: GGGCCCTTTACCTCCTGTGGGTGAATGTGCTGGGCCCCTGGTTCACTGCAGACAGTGGCACCCCAGCACCAGAGCACAATGAGAAACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
3UTR GCA 90 bp GTCAATGGCTATAACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCTaGCGTTTCTCATTGTGCTCTGGTGCTGGGGTGCCACTGTCTGCA +
Preference number: 1 (lower is better)
Translates to: VNGYNRFICRRSCRR*RFSLCSGAGVPLSA
Trigger: TGCAGACAGTGGCACCCCAGCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
3UTR GCA 90 bp CATGCCACCATCCATCAGGGCCCCATCCTCAGAGAACGCTGCTCGTaGCATCGAGCTCATAGAGTGGTAGCTGGCCCCATACACTGCCAG +
Preference number: 1 (lower is better)
Translates to: HATIHQGPILRERCS*HRAHRVVAGPIHCQ
Trigger: CTGGCAGTGTATGGGGCCAGCTACCACTCTATGAGCTCGATGGCACGAGCAGCGTTCTCTGAGGATGGGGCCCTGATGGATGGTGGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564087.2
3UTR GCA 90 bp GAGGTCCATGCCACCATCCATCAGGGCCCCATCCTCAGAGAACGCTaGTCGTGCCATCGAGCTCATAGAGTGGTAGCTGGCCCCATACAC +
Preference number: 1 (lower is better)
Translates to: EVHATIHQGPILRER*SCHRAHRVVAGPIH
Trigger: GTGTATGGGGCCAGCTACCACTCTATGAGCTCGATGGCACGAGCAGCGTTCTCTGAGGATGGGGCCCTGATGGATGGTGGCATGGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564087.2
3UTR GCA 90 bp CCAGTGGCCTGTGGCCACAATGTCAATGGCTATAACCGCTTCATCTaGCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTGGT +
Preference number: 1 (lower is better)
Translates to: PVACGHNVNGYNRFI*RRSCRRCRFSLCSG
Trigger: ACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGACATTGTGGCCACAGGCCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
3UTR-3UTR GCA 90 bp GGCCCAGCACATTCACCCACAGGAGGTAAAGGGCCCGGCCTGGAGCCAGAAGCCAGGCATGAGGGGCTGTaGACCCTGACAGAGCCACCC +
Preference number: 2 (lower is better)
Translates to: GPAHSPTGGKGPGLEPEARHEGL*TLTEPP
Trigger: GGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCT...GGCTTCTGGCTCCAGGCCGGGCCCTTTACCTCCTGTGGGTGAATGTGCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562235.5
3UTR CAA 90 bp AACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATaGTGCTCTGGTGCTGGGGTGCCACTGTCTGCAGTGAACCAGGGG +
Preference number: 2 (lower is better)
Translates to: NRFICRRSCRRCRFS*CSGAGVPLSAVNQG
Trigger: CCCCTGGTTCACTGCAGACAGTGGCACCCCAGCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATGAAGCGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
3UTR-3UTR TCA 90 bp TATAACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCAGGGGCTGTGCACCCTaGCAGAGCCACCCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: YNRFICRRSCRRCRFSLCRGCAP*QSHPGP
Trigger: TGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCT...GCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
3UTR-3UTR GCA 90 bp GCCCCTGGACTAGACCCTCATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAAGGCATGAGGGGCTGTaGACCCTGACAGAGCCACCC +
Preference number: 2 (lower is better)
Translates to: APGLDPHCSRHEGLCTLTRHEGL*TLTEPP
Trigger: GGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCT...TGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCCAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
3UTR-3UTR TCA 90 bp TGGCCTGTGGCCACAATGTCAATGGCTATAACCGCTTCATCTGCCGCCGCTCCTAGGGGCTGTGCACCCTaGCAGAGCCACCCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: WPVATMSMAITASSAAAPRGCAP*QSHPGP
Trigger: TGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCT...AGGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGACATTGTGGCCACAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
3UTR-3UTR GCA 90 bp GGCCCAGCACATTCACCCACAGGAGGTAAAGGGCCCGGCCTGGAGCCAGAAGCCAAGCAGCTGAGCACCTaGACGATGGCTGTCAGTAGG +
Preference number: 2 (lower is better)
Translates to: GPAHSPTGGKGPGLEPEAKQLST*TMAVSR
Trigger: CCTACTGACAGCCATCGTGCAGGTGCTCAGCTGCTT...GGCTTCTGGCTCCAGGCCGGGCCCTTTACCTCCTGTGGGTGAATGTGCTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562235.5
3UTR-3UTR GCA 90 bp TCATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTGGTGCTGGGACTAGACCCTCATTaGTCCAGGCATGAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: SSAAAPVGAAVSHCALVLGLDPH*SRHEGL
Trigger: CAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCC...CAGCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
3UTR-3UTR GCA 90 bp GCCCCTGGACTAGACCCTCATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGGACTAGACCCTCATTaGTCCAGGCATGAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: APGLDPHCSRHEGLCTLTGLDPH*SRHEGL
Trigger: CAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCC...TGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCCAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
3UTR-3UTR CCA 90 bp TCATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTGGTGCTGGTAAAGGGCCCGGCCTaGAGCCTACAAGAGAAACGG +
Preference number: 2 (lower is better)
Translates to: SSAAAPVGAAVSHCALVLVKGPA*SLQEKR
Trigger: CCGTTTCTCTTGTAGGCTCCAGGCCGGGCCCTTTAC...CAGCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565201.1
3UTR-3UTR TCA 90 bp CGAGCTCATAGAGTGGTAGCTGGCCCCATACACTGCCAGACTAAAGCCCAGGGCTCCCCACCAGCCTGGTaGGCTATAGAGCTCCATCCG +
Preference number: 2 (lower is better)
Translates to: RAHRVVAGPIHCQTKAQGSPPAW*AIELHP
Trigger: CGGATGGAGCTCTATAGCTCACCAGGCTGGTGGGGA...GCCCTGGGCTTTAGTCTGGCAGTGTATGGGGCCAGCTACCACTCTATGAGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564087.2
3UTR-3UTR GCA 90 bp GCCTGTGGCCACAATGTCAATGGCTATAACCGCTTCATCTGCCGCCGCTCCTGTAGGCATGAGGGGCTGTaGACCCTGACAGAGCCACCC +
Preference number: 2 (lower is better)
Translates to: ACGHNVNGYNRFICRRSCRHEGL*TLTEPP
Trigger: GGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCT...ACAGGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGACATTGTGGCCACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
3UTR-3UTR GCA 90 bp TGGCCTGTGGCCACAATGTCAATGGCTATAACCGCTTCATCTGCCGCCGCTCCTTGGGGTGCCACTGTCTaGAGTGAACCAGGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: WPVATMSMAITASSAAAPWGATV*SEPGAQ
Trigger: CTGGGCCCCTGGTTCACTGCAGACAGTGGCACCCCA...AGGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGACATTGTGGCCACAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
3UTR-3UTR GCA 90 bp CAGAGCCACCCAGGGCCAGTGGCCTGTGGCCACAATGTCAATGGCTATAACCGCCTCATTGTGCTCTGGTaGTGGGGTGCCACTGTCTGC +
Preference number: 2 (lower is better)
Translates to: QSHPGPVACGHNVNGYNRLIVLW*WGATVC
Trigger: GCAGACAGTGGCACCCCAGCACCAGAGCACAATGAG...GCGGTTATAGCCATTGACATTGTGGCCACAGGCCACTGGCCCTGGGTGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
3UTR-3UTR CCA 90 bp CATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCACCCAGGGCCAGTACTGCTTTTGGCCCCTaGACTAGACCCTCATTGCTC +
Preference number: 2 (lower is better)
Translates to: HCSRHEGLCTLTEPPRASTAFGP*TRPSLL
Trigger: GAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGT...ACTGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
3UTR-3UTR CCA 90 bp CCTGTGGCCACAATGTCAATGGCTATAACCGCTTCATCTGCCGCCGCTCCTGTCGTAAAGGGCCCGGCCTaGAGCCAGAAGCCAGAAGGA +
Preference number: 2 (lower is better)
Translates to: PVATMSMAITASSAAAPVVKGPA*SQKPEG
Trigger: TCCTTCTGGCTTCTGGCTCCAGGCCGGGCCCTTTAC...GACAGGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGACATTGTGGCCACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562235.5
3UTR-3UTR CCA 90 bp GCCACAATGTCAATGGCTATAACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCTACTGCTTTTGGCCCCTaGACTAGACCCTCATTGCTC +
Preference number: 2 (lower is better)
Translates to: ATMSMAITASSAAAPVGATAFGP*TRPSLL
Trigger: GAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGT...AGCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGACATTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
3UTR-3UTR TCA 90 bp GACCCTATAGAGTATAAGTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGAAGGGGCTGTGCACCCTaGCAGAGCCACCCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: DPIEYKYTQYLRLLLAPGRGCAP*QSHPGP
Trigger: TGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCT...TCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATACTTATACTCTATAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
3UTR-3UTR TCA 90 bp AGTGAACCAGGGGCCCAGCACATTCACCCACAGGAGGTAAAGGGCCCGGCCTGGAGAGAAACGGTAACTTaGAGCAAGATGCAGGGAATA +
Preference number: 2 (lower is better)
Translates to: SEPGAQHIHPQEVKGPAWRETVT*SKMQGI
Trigger: TATTCCCTGCATCTTGCTTCAAGTTACCGTTTCTCT...CCAGGCCGGGCCCTTTACCTCCTGTGGGTGAATGTGCTGGGCCCCTGGTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565201.1
3UTR-3UTR TCA 90 bp GCTCATAGAGTGGTAGCTGGCCCCATACACTGCCAGACTAAAGCCCAGGGCCAACATTGGCCCCCAGTATaGTCCGCAGGTAGAACTTCA +
Preference number: 2 (lower is better)
Translates to: AHRVVAGPIHCQTKAQGQHWPPV*SAGRTS
Trigger: TGAAGTTCTACCTGCGGATCATACTGGGGGCCAATG...TTGGCCCTGGGCTTTAGTCTGGCAGTGTATGGGGCCAGCTACCACTCTATGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564087.2
3UTR-3UTR CCA 90 bp GCCTGTGGCCACAATGTCAATGGCTATAACCGCTTCATCTGCCGCCGCTCCTGTTTTCTCATTGTGCTCTaGTGCTGGGGTGCCACTGTC +
Preference number: 2 (lower is better)
Translates to: ACGHNVNGYNRFICRRSCFLIVL*CWGATV
Trigger: GACAGTGGCACCCCAGCACCAGAGCACAATGAGAAA...ACAGGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGACATTGTGGCCACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
3UTR CAA 90 bp AACGACCCTATAGAGTATAAGTATACCCAATACCTCAGACTGCTTTaGGCCCCTGGACTAGACCCTCATTGCTCCAGGCATGAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: NDPIEYKYTQYLRLL*APGLDPHCSRHEGL
Trigger: CAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATACTTATACTCTATAGGGTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
3UTR-3UTR TCA 90 bp ATAGAGTATAAGTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACTCATTGCTCCAGGCATaGGGGGCTGTGCACCCTGAC +
Preference number: 2 (lower is better)
Translates to: IEYKYTQYLRLLLAPGLDSLLQA*GAVHPD
Trigger: GTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGA...GTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATACTTATACTCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
3UTR-3UTR TCA 90 bp CATTTATTCAACGACCCTATAGAGTATAAGTATACCCAATACCTCAGACTGCTTAGGGGCTGTGCACCCTaGCAGAGCCACCCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: HLFNDPIEYKYTQYLRLLRGCAP*QSHPGP
Trigger: TGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCT...AAGCAGTCTGAGGTATTGGGTATACTTATACTCTATAGGGTCGTTGAATAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000565201.1
3UTR-3UTR GCA 90 bp AAGGCAGTAAATGGCATTGGCCCCCAGTATGATCCGCAGGTAGAACTTCAGAGTTTCTCTTCAAATATCTaGTTCTTCCCTCTCGTGCCC +
Preference number: 2 (lower is better)
Translates to: KAVNGIGPQYDPQVELQSFSSNI*FFPLVP
Trigger: GGGCACGAGAGGGAAGAAGCAGATATTTGAAGAGAA...ACTCTGAAGTTCTACCTGCGGATCATACTGGGGGCCAATGCCATTTACTGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564087.2
3UTR GCA 72 bp GGACTAGACCCTCATTGCTCCAGGCATGAGGGGCTGTaGACCCTGACAGAGCCACCCAGGGCCAGTGGCCTG +
Preference number: 3 (lower is better)
Translates to: GLDPHCSRHEGL*TLTEPPRASGL
Trigger: CAGGCCACTGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
3UTR TCA 72 bp TTTGGCCCCTGGACTAGACCCTCATTGCTCCAGGCATaGGGGGCTGTGCACCCTGACAGAGCCACCCAGGGC +
Preference number: 3 (lower is better)
Translates to: FGPWTRPSLLQA*GAVHPDRATQG
Trigger: GCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCCAGGGGCCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
3UTR GCA 72 bp TGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTaGTCTGGTGCTGGGGTGCCACTGTCTGCAGTGAAC +
Preference number: 3 (lower is better)
Translates to: CRRSCRRCRFSL*SGAGVPLSAVN
Trigger: GTTCACTGCAGACAGTGGCACCCCAGCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
3UTR CCA 72 bp CCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTaGTGCTGGGGTGCCACTGTCTGCAGTGAACCAGGG +
Preference number: 3 (lower is better)
Translates to: PLLSALPFLIVL*CWGATVCSEPG
Trigger: CCCTGGTTCACTGCAGACAGTGGCACCCCAGCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
3UTR-3UTR CAA 90 bp CATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCACCCAGGGCCAGTTACCTCAGACTGCTTTaGGCCCCTGGACTAGACCCT +
Preference number: 3 (lower is better)
Translates to: HCSRHEGLCTLTEPPRASYLRLL*APGLDP
Trigger: AGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTA...ACTGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
3UTR TCA 72 bp AGGCCACGGTCCTCCTCATTCTCCCCACCAGCCTGGTaGGCTATAGAGCTCCATCCGCAACTCAGCCAGGTC +
Preference number: 3 (lower is better)
Translates to: RPRSSSFSPPAW*AIELHPQLSQV
Trigger: GACCTGGCTGAGTTGCGGATGGAGCTCTATAGCTCACCAGGCTGGTGGGGAGAATGAGGAGGACCGTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564087.2
3UTR GCA 72 bp TATAACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCTaGCGTTTCTCATTGTGCTCTGGTGCTGGGGTGCCA +
Preference number: 3 (lower is better)
Translates to: YNRFICRRSCRR*RFSLCSGAGVP
Trigger: TGGCACCCCAGCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
3UTR-3UTR CAA 90 bp CACCCTGACAGAGCCACCCAGGGCCAGTGGCCTGTGGCCACAATGTCAATGGCTTACCTCAGACTGCTTTaGGCCCCTGGACTAGACCCT +
Preference number: 3 (lower is better)
Translates to: HPDRATQGQWPVATMSMAYLRLL*APGLDP
Trigger: AGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTA...AGCCATTGACATTGTGGCCACAGGCCACTGGCCCTGGGTGGCTCTGTCAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
3UTR-3UTR CAA 90 bp ACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTGTACCTCAGACTGCTTTaGGCCCCTGGACTAGACCCT +
Preference number: 3 (lower is better)
Translates to: TASSAAAPVGAAVSHCALYLRLL*APGLDP
Trigger: AGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTA...CAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATGAAGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
3UTR GCA 72 bp TTTCTCATTGTGCTCTGGTGCTGGGGTGCCACTGTCTaGAGTGAACCAGGGGCCCAGCACATTCACCCACAG +
Preference number: 3 (lower is better)
Translates to: FLIVLWCWGATV*SEPGAQHIHPQ
Trigger: CTGTGGGTGAATGTGCTGGGCCCCTGGTTCACTGCAGACAGTGGCACCCCAGCACCAGAGCACAATGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
3UTR GCA 72 bp ATCCATCAGGGCCCCATCCTCAGAGAACGCTGCTCGTaGCATCGAGCTCATAGAGTGGTAGCTGGCCCCATA +
Preference number: 3 (lower is better)
Translates to: IHQGPILRERCS*HRAHRVVAGPI
Trigger: TATGGGGCCAGCTACCACTCTATGAGCTCGATGGCACGAGCAGCGTTCTCTGAGGATGGGGCCCTGATGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564087.2
3UTR GCA 72 bp TGTGGCCACAATGTCAATGGCTATAACCGCTTCATCTaGCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTG +
Preference number: 3 (lower is better)
Translates to: CGHNVNGYNRFI*RRSCRRCRFSL
Trigger: CAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGACATTGTGGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
3UTR TCA 72 bp GAAGCCAGAAGGACCAGACATAGAGAGAGAAGCAGCTaGGCACCTGCACGATGGCTGTCAGTAGGATCACAT +
Preference number: 3 (lower is better)
Translates to: EARRTRHRERSS*APARWLSVGSH
Trigger: ATGTGATCCTACTGACAGCCATCGTGCAGGTGCTCAGCTGCTTCTCTCTCTATGTCTGGTCCTTCTGGCTTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562235.5
3UTR-3UTR CAA 90 bp TATAACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCAAGAGAAACGGTAACTaGAAGCAAGATGCAGGGAAT +
Preference number: 3 (lower is better)
Translates to: YNRFICRRSCRRCRFSLCKRNGN*KQDAGN
Trigger: ATTCCCTGCATCTTGCTTCAAGTTACCGTTTCTCTT...GCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565201.1
CDS-3UTR TCA 90 bp CCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTGGTGCTGGGGTGCCAGGGGCTGTGCACCCTaGCAGAGCCACCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PPLLSALPFLIVLWCWGARGCAP*QSHPGP
Trigger: TGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCT...GGCACCCCAGCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTGGTGCTGGGGTGCCCTCTCGTGCCCACTTTaGCCTTGGGCGCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: PPLLSALPFLIVLWCWGALSCPL*PWAPWC
Trigger: GCACCATGGCGCCCAAGGGCAAAGTGGGCACGAGAG...GGCACCCCAGCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR TCA 90 bp CTTCATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTGGTGCAGGGGCTGTGCACCCTaGCAGAGCCACCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LHLPPLLSALPFLIVLWCRGCAP*QSHPGP
Trigger: TGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCT...GCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR TCA 90 bp TGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCACCCAGGGCCAGTGGCTCATTGCTCCAGGCATaGGGGGCTGTGCACCCTGAC +
Preference number: 4 (lower is better)
Translates to: CSRHEGLCTLTEPPRASGSLLQA*GAVHPD
Trigger: GTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGA...GCCACTGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp TGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCACCCAGGGCCAGTGGCTATAACCGCTTCATCTaGCGCCGCTCCTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: CSRHEGLCTLTEPPRASGYNRFI*RRSCRR
Trigger: GCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATA...GCCACTGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR CCA 90 bp TGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCACCCAGGGCCAGTGGCGTAAAGGGCCCGGCCTaGAGCCAGAAGCCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: CSRHEGLCTLTEPPRASGVKGPA*SQKPEG
Trigger: TCCTTCTGGCTTCTGGCTCCAGGCCGGGCCCTTTAC...GCCACTGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
CDS-3UTR GCA 90 bp CCTCATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCACCCAGGGCCGCTGGCCCCATACACTaGCAGACTAAAGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PHCSRHEGLCTLTEPPRAAGPIH*QTKAQG
Trigger: GCCCTGGGCTTTAGTCTGGCAGTGTATGGGGCCAGC...GGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp GCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTGGTGCTGGGGTGCCGCTCCTGTCGGCGCTaGCGTTTCTCATTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: AAAPVGAAVSHCALVLGCRSCRR*RFSLCS
Trigger: AGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCG...GCACCCCAGCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCACCCAGGGCCAGTAGGCATGAGGGGCTGTaGACCCTGACAGAGCCACCC +
Preference number: 4 (lower is better)
Translates to: HCSRHEGLCTLTEPPRASRHEGL*TLTEPP
Trigger: GGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCT...ACTGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR CCA 90 bp CCTCATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCACCCAGGGCCTGCCCTTGGGCGCCATaGTGCGAGGCAAATACCCAG +
Preference number: 4 (lower is better)
Translates to: PHCSRHEGLCTLTEPPRACPWAP*CEANTQ
Trigger: CTGGGTATTTGCCTCGCACCATGGCGCCCAAGGGCA...GGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000565201.1
3UTR CAA 72 bp ATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATaGTGCTCTGGTGCTGGGGTGCCACTGTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: ICRRSCRRCRFS*CSGAGVPLSAV
Trigger: CACTGCAGACAGTGGCACCCCAGCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR TCA 90 bp CATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCACCCAGGGCCAGTTGCCACTGTCTGCAGTaGACCAGGGGCCCAGCACAT +
Preference number: 4 (lower is better)
Translates to: HCSRHEGLCTLTEPPRASCHCLQ*TRGPAH
Trigger: ATGTGCTGGGCCCCTGGTTCACTGCAGACAGTGGCA...ACTGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp ACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTGCCTTGGGCGCCATGGTaGGAGGCAAATACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: TASSAAAPVGAAVSHCALPWAPW*EANTQP
Trigger: GGGCTGGGTATTTGCCTCGCACCATGGCGCCCAAGG...CAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATGAAGCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp GGGGCCCAGCACATTCACCCACAGGAGGTAAAGGGCCCGGCCTGGAGCCTACAAGCTTCTTCCCTCTCGTaGCCACTTTGCCCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: GAQHIHPQEVKGPAWSLQASSLS*PLCPWA
Trigger: CGCCCAAGGGCAAAGTGGGCACGAGAGGGAAGAAGC...TTGTAGGCTCCAGGCCGGGCCCTTTACCTCCTGTGGGTGAATGTGCTGGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565201.1
CDS-3UTR GCA 90 bp CATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCACCCAGGGCCAGTGCTGGCCCCATACACTaGCAGACTAAAGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: HCSRHEGLCTLTEPPRASAGPIH*QTKAQG
Trigger: GCCCTGGGCTTTAGTCTGGCAGTGTATGGGGCCAGC...ACTGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CCTCATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCACCCAGGGCCCTCATTGTGCTCTGGTaGTGGGGTGCCACTGTCTGC +
Preference number: 4 (lower is better)
Translates to: PHCSRHEGLCTLTEPPRALIVLW*WGATVC
Trigger: GCAGACAGTGGCACCCCAGCACCAGAGCACAATGAG...GGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp ACCAGGGGCCCAGCACATTCACCCACAGGAGGTAAAGGGCCCGGCCTGGAGCCTCTCATTGTGCTCTGGTaGTGGGGTGCCACTGTCTGC +
Preference number: 4 (lower is better)
Translates to: TRGPAHSPTGGKGPGLEPLIVLW*WGATVC
Trigger: GCAGACAGTGGCACCCCAGCACCAGAGCACAATGAG...AGGCTCCAGGCCGGGCCCTTTACCTCCTGTGGGTGAATGTGCTGGGCCCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565201.1
CDS-3UTR GCA 90 bp CCTCATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCACCCAGGGCCCGCTCCTGTCGGCGCTaGCGTTTCTCATTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PHCSRHEGLCTLTEPPRARSCRR*RFSLCS
Trigger: AGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCG...GGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR TCA 90 bp AGGGGCCCAGCACATTCACCCACAGGAGGTAAAGGGCCCGGCCTGGAGCCAGAATGCCCTGCTCCATGTTaGGGTCCATGCCACCATCCA +
Preference number: 4 (lower is better)
Translates to: RGPAHSPTGGKGPGLEPECPAPC*GPCHHP
Trigger: TGGATGGTGGCATGGACCTCAACATGGAGCAGGGCA...TTCTGGCTCCAGGCCGGGCCCTTTACCTCCTGTGGGTGAATGTGCTGGGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562235.5
CDS-3UTR GCA 90 bp ACCCTGACAGAGCCACCCAGGGCCAGTGGCCTGTGGCCACAATGTCAATGGCTACCTTGGGCGCCATGGTaGGAGGCAAATACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: TLTEPPRASGLWPQCQWLPWAPW*EANTQP
Trigger: GGGCTGGGTATTTGCCTCGCACCATGGCGCCCAAGG...TAGCCATTGACATTGTGGCCACAGGCCACTGGCCCTGGGTGGCTCTGTCAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp TGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCACCCAGGGCCAGTGGCATCCTCAGAGAACGCTaGTCGTGCCATCGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: CSRHEGLCTLTEPPRASGILRER*SCHRAH
Trigger: ATGAGCTCGATGGCACGAGCAGCGTTCTCTGAGGAT...GCCACTGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp TCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTGGTGCTGGGGTGCCACTGTCTTGGGGTGCCACTGTCTaGAGTGAACCAGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SCRRCRFSLCSGAGVPLSWGATV*SEPGAQ
Trigger: CTGGGCCCCTGGTTCACTGCAGACAGTGGCACCCCA...AGACAGTGGCACCCCAGCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp GGACTAGACCCTCATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCATGGGGTGCCACTGTCTaGAGTGAACCAGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GLDPHCSRHEGLCTLTEPWGATV*SEPGAQ
Trigger: CTGGGCCCCTGGTTCACTGCAGACAGTGGCACCCCA...TGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCACCCAGGGCCAGTCTCATTGTGCTCTGGTaGTGGGGTGCCACTGTCTGC +
Preference number: 4 (lower is better)
Translates to: HCSRHEGLCTLTEPPRASLIVLW*WGATVC
Trigger: GCAGACAGTGGCACCCCAGCACCAGAGCACAATGAG...ACTGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CCTCATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCACCCAGGGCCTGCCGTTTCTCATTGTaGTCTGGTGCTGGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: PHCSRHEGLCTLTEPPRACRFSL*SGAGVP
Trigger: TGGCACCCCAGCACCAGAGCACAATGAGAAACGGCA...GGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR CCA 90 bp GGACTAGACCCTCATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCATGCCCACTTTGCCCTTaGGCGCCATGGTGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: GLDPHCSRHEGLCTLTEPCPLCP*APWCEA
Trigger: TGCCTCGCACCATGGCGCCCAAGGGCAAAGTGGGCA...TGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000565201.1
CDS-3UTR CCA 90 bp GCCCCTGGACTAGACCCTCATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACATTAGATGCCCCTTCTTaGGAGCGCCCCCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: APGLDPHCSRHEGLCTLTLDAPS*ERPQPT
Trigger: TGTGGGCTGGGGGCGCTCCCAAGAAGGGGCATCTAA...TGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCCAGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000565201.1
CDS-3UTR TCA 90 bp TCATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTGGTGCTGTGCCCTGCTCCATGTTaGGGTCCATGCCACCATCCA +
Preference number: 4 (lower is better)
Translates to: SSAAAPVGAAVSHCALVLCPAPC*GPCHHP
Trigger: TGGATGGTGGCATGGACCTCAACATGGAGCAGGGCA...CAGCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR TCA 90 bp GGACTAGACCCTCATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCATCCCCACCAGCCTGGTaGGCTATAGAGCTCCATCCG +
Preference number: 4 (lower is better)
Translates to: GLDPHCSRHEGLCTLTEPSPPAW*AIELHP
Trigger: CGGATGGAGCTCTATAGCTCACCAGGCTGGTGGGGA...TGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563953.5
CDS-3UTR TCA 90 bp ATGATGAGATGCCGTCAGGAGGCCACGGTCCTCCTCATTCTCCCCACCAGCCTGTCCCCACCAGCCTGGTaGGCTATAGAGCTCCATCCG +
Preference number: 4 (lower is better)
Translates to: MMRCRQEATVLLILPTSLSPPAW*AIELHP
Trigger: CGGATGGAGCTCTATAGCTCACCAGGCTGGTGGGGA...CAGGCTGGTGGGGAGAATGAGGAGGACCGTGGCCTCCTGACGGCATCTCATCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564087.2
CDS-3UTR GCA 90 bp CACAATGTCAATGGCTATAACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCTGCTGGGGTGCCACTGTCTaGAGTGAACCAGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HNVNGYNRFICRRSCRRCWGATV*SEPGAQ
Trigger: CTGGGCCCCTGGTTCACTGCAGACAGTGGCACCCCA...GCAGCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGACATTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp TCACCCACAGGAGGTAAAGGGCCCGGCCTGGAGCCAGAAGCCAGAAGGACCAGAGGACTAGACCCTCATTaGTCCAGGCATGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SPTGGKGPGLEPEARRTRGLDPH*SRHEGL
Trigger: CAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCC...TCTGGTCCTTCTGGCTTCTGGCTCCAGGCCGGGCCCTTTACCTCCTGTGGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562235.5
CDS-3UTR GCA 90 bp CTTCATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTGGTGCGGACTAGACCCTCATTaGTCCAGGCATGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LHLPPLLSALPFLIVLWCGLDPH*SRHEGL
Trigger: CAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCC...GCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CCTGGACTAGACCCTCATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGATGGGGAGGGTTAGATaGCCCTTCTTGGGAGCGCCC +
Preference number: 4 (lower is better)
Translates to: PGLDPHCSRHEGLCTLTEMGRVR*PFLGAP
Trigger: GGGCGCTCCCAAGAAGGGGCATCTAACCCTCCCCAT...CTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565201.1
CDS-3UTR CCA 90 bp ATGTCAATGGCTATAACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTTGCCCACTTTGCCCTTaGGCGCCATGGTGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: MSMAITASSAAAPVGAAVCPLCP*APWCEA
Trigger: TGCCTCGCACCATGGCGCCCAAGGGCAAAGTGGGCA...AACGGCAGCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR CCA 90 bp CATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCACCCAGGGCCAGTAGGGCCAGTGGCCTGTaGCCACAATGTCAATGGCTA +
Preference number: 4 (lower is better)
Translates to: HCSRHEGLCTLTEPPRASRASGL*PQCQWL
Trigger: TAGCCATTGACATTGTGGCCACAGGCCACTGGCCCT...ACTGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR CCA 90 bp CCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTGGTGCTGGGGTGCCGCAGGGAATAAAAGATaGGGAGGGTTAGATGCCCCT +
Preference number: 4 (lower is better)
Translates to: PPLLSALPFLIVLWCWGAAGNKR*GGLDAP
Trigger: AGGGGCATCTAACCCTCCCCATCTTTTATTCCCTGC...GGCACCCCAGCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565201.1
CDS-3UTR TCA 90 bp CCTGGACTAGACCCTCATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGAGAGAGAGAAGCAGCTaGGCACCTGCACGATGGCTG +
Preference number: 4 (lower is better)
Translates to: PGLDPHCSRHEGLCTLTERERSS*APARWL
Trigger: CAGCCATCGTGCAGGTGCTCAGCTGCTTCTCTCTCT...CTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR TCA 90 bp TATAACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTGCCACTGTCTGCAGTaGACCAGGGGCCCAGCACAT +
Preference number: 4 (lower is better)
Translates to: YNRFICRRSCRRCRFSLCCHCLQ*TRGPAH
Trigger: ATGTGCTGGGCCCCTGGTTCACTGCAGACAGTGGCA...GCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR TCA 90 bp CCTGACAGAGCCACCCAGGGCCAGTGGCCTGTGGCCACAATGTCAATGGCTATATGCCACTGTCTGCAGTaGACCAGGGGCCCAGCACAT +
Preference number: 4 (lower is better)
Translates to: PDRATQGQWPVATMSMAICHCLQ*TRGPAH
Trigger: ATGTGCTGGGCCCCTGGTTCACTGCAGACAGTGGCA...TATAGCCATTGACATTGTGGCCACAGGCCACTGGCCCTGGGTGGCTCTGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR TCA 90 bp CAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCCAGGCATAGGGGCTGTGCACCCTaGCAGAGCCACCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: QYLRLLLAPGLDPHCSRHRGCAP*QSHPGP
Trigger: TGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCT...ATGCCTGGAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR TCA 90 bp TATAACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCATTGCTCCAGGCATaGGGGGCTGTGCACCCTGAC +
Preference number: 4 (lower is better)
Translates to: YNRFICRRSCRRCRFSLCSLLQA*GAVHPD
Trigger: GTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGA...GCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp ATGGCTGTCAGTAGGATCACATCCTTAAGGTGCCTGGGCTGGCGGTGGGGGACAGCTGGCCCCATACACTaGCAGACTAAAGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: MAVSRITSLRCLGWRWGTAGPIH*QTKAQG
Trigger: GCCCTGGGCTTTAGTCTGGCAGTGTATGGGGCCAGC...TGTCCCCCACCGCCAGCCCAGGCACCTTAAGGATGTGATCCTACTGACAGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562235.5
CDS-3UTR GCA 90 bp CATCAGGGCCCCATCCTCAGAGAACGCTGCTCGTGCCATCGAGCTCATAGAGTGGCTGGCCCCATACACTaGCAGACTAAAGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: HQGPILRERCSCHRAHRVAGPIH*QTKAQG
Trigger: GCCCTGGGCTTTAGTCTGGCAGTGTATGGGGCCAGC...CACTCTATGAGCTCGATGGCACGAGCAGCGTTCTCTGAGGATGGGGCCCTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564087.2
CDS-3UTR GCA 90 bp CTTCATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTGGTGCTGCTCTGCCATGCCCTaGTCCATGTTGAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: LHLPPLLSALPFLIVLWCCSAMP*SMLRSM
Trigger: CATGGACCTCAACATGGAGCAGGGCATGGCAGAGCA...GCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565201.1
CDS-3UTR GCA 90 bp CACCCTGACAGAGCCACCCAGGGCCAGTGGCCTGTGGCCACAATGTCAATGGCTAAGCAGCTGAGCACCTaGACGATGGCTGTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: HPDRATQGQWPVATMSMAKQLST*TMAVSR
Trigger: CCTACTGACAGCCATCGTGCAGGTGCTCAGCTGCTT...AGCCATTGACATTGTGGCCACAGGCCACTGGCCCTGGGTGGCTCTGTCAGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp ACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTGTGCCGTTTCTCATTGTaGTCTGGTGCTGGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: TASSAAAPVGAAVSHCALCRFSL*SGAGVP
Trigger: TGGCACCCCAGCACCAGAGCACAATGAGAAACGGCA...CAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATGAAGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp AAGGGCCCGGCCTGGAGCCAGAAGCCAGAAGGACCAGACATAGAGAGAGAAGCATATAACCGCTTCATCTaGCGCCGCTCCTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: KGPAWSQKPEGPDIEREAYNRFI*RRSCRR
Trigger: GCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATA...TGCTTCTCTCTCTATGTCTGGTCCTTCTGGCTTCTGGCTCCAGGCCGGGCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562235.5
CDS-3UTR GCA 90 bp CCTGTGGCCACAATGTCAATGGCTATAACCGCTTCATCTGCCGCCGCTCCTGTCAGGCATGAGGGGCTGTaGACCCTGACAGAGCCACCC +
Preference number: 4 (lower is better)
Translates to: PVATMSMAITASSAAAPVRHEGL*TLTEPP
Trigger: GGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCT...GACAGGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGACATTGTGGCCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CCTGGACTAGACCCTCATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGGCTTCTTCCCTCTCGTaGCCACTTTGCCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: PGLDPHCSRHEGLCTLTEASSLS*PLCPWA
Trigger: AGCCCAAGGGCAAAGTGGGCACGAGAGGGAAGAAGC...CTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563953.5
CDS-3UTR GCA 90 bp TCATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTGGTGCTGCACTCTGCCATGCCCTaGTCCATGTTGAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: SSAAAPVGAAVSHCALVLHSAMP*SMLRSM
Trigger: CATGGACCTCAACATGGAGCAGGGCATGGCAGAGTG...CAGCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562235.5
CDS-3UTR CCA 90 bp GCCACAATGTCAATGGCTATAACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCTTGCCCTTGGGCGCCATaGTGCGAGGCAAATACCCAG +
Preference number: 4 (lower is better)
Translates to: ATMSMAITASSAAAPVGACPWAP*CEANTQ
Trigger: CTGGGTATTTGCCTCGCACCATGGCGCCCAAGGGCA...AGCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGACATTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR CCA 90 bp ATGTCAATGGCTATAACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTGTAAAGGGCCCGGCCTaGAGCCAGAAGCCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: MSMAITASSAAAPVGAAVVKGPA*SQKPEG
Trigger: TCCTTCTGGCTTCTGGCTCCAGGCCGGGCCCTTTAC...AACGGCAGCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562235.5
CDS-3UTR CCA 90 bp TCATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTGGTGCTGATTGTGCTCTGGTGCTaGGGTGCCACTGTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SSAAAPVGAAVSHCALVLIVLWC*GATVCS
Trigger: ACTGCAGACAGTGGCACCCCAGCACCAGAGCACAAT...CAGCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR CCA 90 bp CATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCACCCAGGGCCAGTTTTCTCATTGTGCTCTaGTGCTGGGGTGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: HCSRHEGLCTLTEPPRASFLIVL*CWGATV
Trigger: GACAGTGGCACCCCAGCACCAGAGCACAATGAGAAA...ACTGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR CCA 90 bp GCCCCTGGACTAGACCCTCATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAAGGGCCAGTGGCCTGTaGCCACAATGTCAATGGCTA +
Preference number: 4 (lower is better)
Translates to: APGLDPHCSRHEGLCTLTRASGL*PQCQWL
Trigger: TAGCCATTGACATTGTGGCCACAGGCCACTGGCCCT...TGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCCAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR CCA 90 bp GGCCACAATGTCAATGGCTATAACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCGTAAAGGGCCCGGCCTaGAGCCTACAAGAGAAACGG +
Preference number: 4 (lower is better)
Translates to: GHNVNGYNRFICRRSCRRVKGPA*SLQEKR
Trigger: CCGTTTCTCTTGTAGGCTCCAGGCCGGGCCCTTTAC...GCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGACATTGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565201.1
CDS-3UTR TCA 90 bp CTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCCAGGCATGAGGGGAGAGAGAGAAGCAGCTaGGCACCTGCACGATGGCTG +
Preference number: 4 (lower is better)
Translates to: LRLLLAPGLDPHCSRHEGRERSS*APARWL
Trigger: CAGCCATCGTGCAGGTGCTCAGCTGCTTCTCTCTCT...CCCCTCATGCCTGGAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR TCA 90 bp GCCACAATGTCAATGGCTATAACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCTAGAGAGAGAAGCAGCTaGGCACCTGCACGATGGCTG +
Preference number: 4 (lower is better)
Translates to: ATMSMAITASSAAAPVGARERSS*APARWL
Trigger: CAGCCATCGTGCAGGTGCTCAGCTGCTTCTCTCTCT...AGCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGACATTGTGGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR TCA 90 bp GTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCAGGGGCTGTGCACCCTaGCAGAGCCACCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: VYPIPQTAFGPWTRPSLLRGCAP*QSHPGP
Trigger: TGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCT...GAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTGGTGCTGGGGTGCCTTCTCTTCAAATATCTaGTTCTTCCCTCTCGTGCCC +
Preference number: 4 (lower is better)
Translates to: PPLLSALPFLIVLWCWGAFSSNI*FFPLVP
Trigger: GGGCACGAGAGGGAAGAAGCAGATATTTGAAGAGAA...GGCACCCCAGCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp GGACTAGACCCTCATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCATGCTCTGCCATGCCCTaGTCCATGTTGAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: GLDPHCSRHEGLCTLTEPCSAMP*SMLRSM
Trigger: CATGGACCTCAACATGGAGCAGGGCATGGCAGAGCA...TGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCACCCAGGGCCAGTATCCTTAAGGTGCTCTaGCATGCCCTGCTCCATGTT +
Preference number: 4 (lower is better)
Translates to: HCSRHEGLCTLTEPPRASILKVL*HALLHV
Trigger: AACATGGAGCAGGGCATGGCAGAGCACCTTAAGGAT...ACTGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CCTGGACTAGACCCTCATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGAAGCAGCTGAGCACCTaGACGATGGCTGTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: PGLDPHCSRHEGLCTLTEKQLST*TMAVSR
Trigger: CCTACTGACAGCCATCGTGCAGGTGCTCAGCTGCTT...CTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp GGCCACAATGTCAATGGCTATAACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTaGTCTGGTGCTGGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GHNVNGYNRFICRRSCRRCRFSL*SGAGVP
Trigger: TGGCACCCCAGCACCAGAGCACAATGAGAAACGGCA...GCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGACATTGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp ATGATGAGATGCCGTCAGGAGGCCACGGTCCTCCTCATTCTCCCCACCAGCCTGTCCTCCAGTCCATTCTaGCTAGGGCTGACGCCATCT +
Preference number: 4 (lower is better)
Translates to: MMRCRQEATVLLILPTSLSSSPF*LGLTPS
Trigger: AGATGGCGTCAGCCCTAGGCAGAATGGACTGGAGGA...CAGGCTGGTGGGGAGAATGAGGAGGACCGTGGCCTCCTGACGGCATCTCATCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564087.2
CDS-3UTR GCA 90 bp GGCCCCATCCTCAGAGAACGCTGCTCGTGCCATCGAGCTCATAGAGTGGTAGCTGCTTCTTCCCTCTCGTaGCCACTTTGCCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GPILRERCSCHRAHRVVAASSLS*PLCPWA
Trigger: AGCCCAAGGGCAAAGTGGGCACGAGAGGGAAGAAGC...AGCTACCACTCTATGAGCTCGATGGCACGAGCAGCGTTCTCTGAGGATGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564087.2
CDS-3UTR TCA 90 bp TCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTGGTGCTGGGGTGCCACTGTCTCATTGGCCCCCAGTATaGTCCGCAGGTAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: SCRRCRFSLCSGAGVPLSHWPPV*SAGRTS
Trigger: TGAAGTTCTACCTGCGGATCATACTGGGGGCCAATG...AGACAGTGGCACCCCAGCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp ACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCCAGGGCTTCTTCCCTCTCGTaGCCACTTTGCCCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: TQYLRLLLAPGLDPHCSRASSLS*PLCPWA
Trigger: CGCCCAAGGGCAAAGTGGGCACGAGAGGGAAGAAGC...CCTGGAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CCTCATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCACCCAGGGCCTTCTCTTCAAATATCTaGTTCTTCCCTCTCGTGCCC +
Preference number: 4 (lower is better)
Translates to: PHCSRHEGLCTLTEPPRAFSSNI*FFPLVP
Trigger: GGGCACGAGAGGGAAGAAGCAGATATTTGAAGAGAA...GGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp ACCCTGACAGAGCCACCCAGGGCCAGTGGCCTGTGGCCACAATGTCAATGGCTAAGAGAACGCTGCTCGTaGCATCGAGCTCATAGAGTG +
Preference number: 4 (lower is better)
Translates to: TLTEPPRASGLWPQCQWLRERCS*HRAHRV
Trigger: CACTCTATGAGCTCGATGGCACGAGCAGCGTTCTCT...TAGCCATTGACATTGTGGCCACAGGCCACTGGCCCTGGGTGGCTCTGTCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CCCACTTTGCCCTTGGGCTGCAGAGGAATGATGAGATGCCGTCAGGAGGCCACGAGAGAACGCTGCTCGTaGCATCGAGCTCATAGAGTG +
Preference number: 4 (lower is better)
Translates to: PTLPLGCRGMMRCRQEATRERCS*HRAHRV
Trigger: CACTCTATGAGCTCGATGGCACGAGCAGCGTTCTCT...CGTGGCCTCCTGACGGCATCTCATCATTCCTCTGCAGCCCAAGGGCAAAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564087.2
CDS-3UTR GCA 90 bp CCTGGACTAGACCCTCATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGATCCTCAGAGAACGCTaGTCGTGCCATCGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: PGLDPHCSRHEGLCTLTEILRER*SCHRAH
Trigger: ATGAGCTCGATGGCACGAGCAGCGTTCTCTGAGGAT...CTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp AACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTATCCTCAGAGAACGCTaGTCGTGCCATCGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: NRFICRRSCRRCRFSLCSILRER*SCHRAH
Trigger: ATGAGCTCGATGGCACGAGCAGCGTTCTCTGAGGAT...AGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATGAAGCGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp GCCACAATGTCAATGGCTATAACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCTAAGCAGCTGAGCACCTaGACGATGGCTGTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: ATMSMAITASSAAAPVGAKQLST*TMAVSR
Trigger: CCTACTGACAGCCATCGTGCAGGTGCTCAGCTGCTT...AGCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGACATTGTGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCCAGGCATGAGGGGTGCCGTTTCTCATTGTaGTCTGGTGCTGGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LRLLLAPGLDPHCSRHEGCRFSL*SGAGVP
Trigger: TGGCACCCCAGCACCAGAGCACAATGAGAAACGGCA...CCCCTCATGCCTGGAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR CCA 90 bp GGACTAGACCCTCATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCATTTCTCATTGTGCTCTaGTGCTGGGGTGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: GLDPHCSRHEGLCTLTEPFLIVL*CWGATV
Trigger: GACAGTGGCACCCCAGCACCAGAGCACAATGAGAAA...TGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR CCA 90 bp ACCCTGACAGAGCCACCCAGGGCCAGTGGCCTGTGGCCACAATGTCAATGGCTAACTGCTTTTGGCCCCTaGACTAGACCCTCATTGCTC +
Preference number: 4 (lower is better)
Translates to: TLTEPPRASGLWPQCQWLTAFGP*TRPSLL
Trigger: GAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGT...TAGCCATTGACATTGTGGCCACAGGCCACTGGCCCTGGGTGGCTCTGTCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR TCA 90 bp CTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCCAGGCATGAGGGGCATTGGCCCCCAGTATaGTCCGCAGGTAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: LRLLLAPGLDPHCSRHEGHWPPV*SAGRTS
Trigger: TGAAGTTCTACCTGCGGATCATACTGGGGGCCAATG...CCCCTCATGCCTGGAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR TCA 90 bp CATCAGGGCCCCATCCTCAGAGAACGCTGCTCGTGCCATCGAGCTCATAGAGTGCATTGGCCCCCAGTATaGTCCGCAGGTAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: HQGPILRERCSCHRAHRVHWPPV*SAGRTS
Trigger: TGAAGTTCTACCTGCGGATCATACTGGGGGCCAATG...CACTCTATGAGCTCGATGGCACGAGCAGCGTTCTCTGAGGATGGGGCCCTGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564087.2
CDS-3UTR GCA 90 bp GTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCCTCTCGTGCCCACTTTaGCCTTGGGCGCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: VYPIPQTAFGPWTRPSLLLSCPL*PWAPWC
Trigger: GCACCATGGCGCCCAAGGGCAAAGTGGGCACGAGAG...GAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CACAATGTCAATGGCTATAACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCTGCAGAGAACGCTGCTCGTaGCATCGAGCTCATAGAGTG +
Preference number: 4 (lower is better)
Translates to: HNVNGYNRFICRRSCRRCRERCS*HRAHRV
Trigger: CACTCTATGAGCTCGATGGCACGAGCAGCGTTCTCT...GCAGCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGACATTGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CACAATGTCAATGGCTATAACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCTGCATCCTCAGAGAACGCTaGTCGTGCCATCGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: HNVNGYNRFICRRSCRRCILRER*SCHRAH
Trigger: ATGAGCTCGATGGCACGAGCAGCGTTCTCTGAGGAT...GCAGCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGACATTGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp ACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCCAGGCGCTCCTGTCGGCGCTaGCGTTTCTCATTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: TQYLRLLLAPGLDPHCSRRSCRR*RFSLCS
Trigger: AGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCG...CCTGGAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CATCGAGCTCATAGAGTGGTAGCTGGCCCCATACACTGCCAGACTAAAGCCCAGCTCTCGTGCCCACTTTaGCCTTGGGCTGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: HRAHRVVAGPIHCQTKAQLSCPL*PWAAEE
Trigger: TTCCTCTGCAGCCCAAGGGCAAAGTGGGCACGAGAG...CTGGGCTTTAGTCTGGCAGTGTATGGGGCCAGCTACCACTCTATGAGCTCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564087.2
CDS-3UTR CCA 90 bp TGGCCTGTGGCCACAATGTCAATGGCTATAACCGCTTCATCTGCCGCCGCTCCTATTGTGCTCTGGTGCTaGGGTGCCACTGTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: WPVATMSMAITASSAAAPIVLWC*GATVCS
Trigger: ACTGCAGACAGTGGCACCCCAGCACCAGAGCACAAT...AGGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGACATTGTGGCCACAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp GTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCGCTGGCCCCATACACTaGCAGACTAAAGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: VYPIPQTAFGPWTRPSLLAGPIH*QTKAQG
Trigger: GCCCTGGGCTTTAGTCTGGCAGTGTATGGGGCCAGC...GAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CATAGAGTGGTAGCTGGCCCCATACACTGCCAGACTAAAGCCCAGGGCCAACCAATCCTCAGAGAACGCTaGTCGTGCCATCGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: HRVVAGPIHCQTKAQGQPILRER*SCHRAH
Trigger: ATGAGCTCGATGGCACGAGCAGCGTTCTCTGAGGAT...TGGTTGGCCCTGGGCTTTAGTCTGGCAGTGTATGGGGCCAGCTACCACTCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564087.2
CDS-3UTR GCA 90 bp GTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCTATAACCGCTTCATCTaGCGCCGCTCCTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: VYPIPQTAFGPWTRPSLLYNRFI*RRSCRR
Trigger: GCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATA...GAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp AAGTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCAGGCATGAGGGGCTGTaGACCCTGACAGAGCCACCC +
Preference number: 4 (lower is better)
Translates to: KYTQYLRLLLAPGLDPHCRHEGL*TLTEPP
Trigger: GGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCT...GCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp ATCCTCAGAGAACGCTGCTCGTGCCATCGAGCTCATAGAGTGGTAGCTGGCCCCACTTTGCCCTTGGGCTaGAGAGGAATGATGAGATGC +
Preference number: 4 (lower is better)
Translates to: ILRERCSCHRAHRVVAGPTLPLG*RGMMRC
Trigger: GCATCTCATCATTCCTCTGCAGCCCAAGGGCAAAGT...GGGGCCAGCTACCACTCTATGAGCTCGATGGCACGAGCAGCGTTCTCTGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564087.2
CDS-3UTR CCA 90 bp CCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCCAGGCAATTGTGCTCTGGTGCTaGGGTGCCACTGTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: PIPQTAFGPWTRPSLLQAIVLWC*GATVCS
Trigger: ACTGCAGACAGTGGCACCCCAGCACCAGAGCACAAT...TGCCTGGAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR CCA 90 bp CCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCCAGGCAGTGCAGAAACCGCCATaGTGCGAGGCAAATACCCAG +
Preference number: 4 (lower is better)
Translates to: PIPQTAFGPWTRPSLLQAVQKPP*CEANTQ
Trigger: CTGGGTATTTGCCTCGCACCATGGCGGTTTCTGCAC...TGCCTGGAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563953.5
CDS-3UTR TCA 90 bp CCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCCAGGCACATTGGCCCCCAGTATaGTCCGCAGGTAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: PIPQTAFGPWTRPSLLQAHWPPV*SAGRTS
Trigger: TGAAGTTCTACCTGCGGATCATACTGGGGGCCAATG...TGCCTGGAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR TCA 90 bp ACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCCAGGCATTGGCCCCCAGTATaGTCCGCAGGTAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: TQYLRLLLAPGLDPHCSRHWPPV*SAGRTS
Trigger: TGAAGTTCTACCTGCGGATCATACTGGGGGCCAATG...CCTGGAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR TCA 90 bp GTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCTGCCCTGCTCCATGTTaGGGTCCATGCCACCATCCA +
Preference number: 4 (lower is better)
Translates to: VYPIPQTAFGPWTRPSLLCPAPC*GPCHHP
Trigger: TGGATGGTGGCATGGACCTCAACATGGAGCAGGGCA...GAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR TCA 90 bp GTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCAGAGAGAGAAGCAGCTaGGCACCTGCACGATGGCTG +
Preference number: 4 (lower is better)
Translates to: VYPIPQTAFGPWTRPSLLRERSS*APARWL
Trigger: CAGCCATCGTGCAGGTGCTCAGCTGCTTCTCTCTCT...GAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp GTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCCGCTCCTGTCGGCGCTaGCGTTTCTCATTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: VYPIPQTAFGPWTRPSLLRSCRR*RFSLCS
Trigger: AGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCG...GAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp GTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCGGACTAGACCCTCATTaGTCCAGGCATGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VYPIPQTAFGPWTRPSLLGLDPH*SRHEGL
Trigger: CAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCC...GAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp GTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCCTCTCGTGCCCACTTTaGCCTTGGGCTGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: VYPIPQTAFGPWTRPSLLLSCPL*PWAAEE
Trigger: TTCCTCTGCAGCCCAAGGGCAAAGTGGGCACGAGAG...GAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563953.5
CDS-3UTR GCA 90 bp CTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCCAGGCATGAGGGGTTCTCTTCAAATATCTaGTTCTTCCCTCTCGTGCCC +
Preference number: 4 (lower is better)
Translates to: LRLLLAPGLDPHCSRHEGFSSNI*FFPLVP
Trigger: GGGCACGAGAGGGAAGAAGCAGATATTTGAAGAGAA...CCCCTCATGCCTGGAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCCAGGCATAGAGAACGCTGCTCGTaGCATCGAGCTCATAGAGTG +
Preference number: 4 (lower is better)
Translates to: QYLRLLLAPGLDPHCSRHRERCS*HRAHRV
Trigger: CACTCTATGAGCTCGATGGCACGAGCAGCGTTCTCT...ATGCCTGGAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCCAGGCAATCCTTAAGGTGCTCTaGCATGCCCTGCTCCATGTT +
Preference number: 4 (lower is better)
Translates to: PIPQTAFGPWTRPSLLQAILKVL*HALLHV
Trigger: AACATGGAGCAGGGCATGGCAGAGCACCTTAAGGAT...TGCCTGGAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCCAGGCATATCACATCCTTAAGGTaGTCTGCCATGCCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QYLRLLLAPGLDPHCSRHITSLR*SAMPCS
Trigger: GGAGCAGGGCATGGCAGAGCACCTTAAGGATGTGAT...ATGCCTGGAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp GTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCAAGCAGCTGAGCACCTaGACGATGGCTGTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: VYPIPQTAFGPWTRPSLLKQLST*TMAVSR
Trigger: CCTACTGACAGCCATCGTGCAGGTGCTCAGCTGCTT...GAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp GACCCTATAGAGTATAAGTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGATGGGGTGCCACTGTCTaGAGTGAACCAGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: DPIEYKYTQYLRLLLAPGWGATV*SEPGAQ
Trigger: CTGGGCCCCTGGTTCACTGCAGACAGTGGCACCCCA...TCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATACTTATACTCTATAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp GACCCTATAGAGTATAAGTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGAAGGCATGAGGGGCTGTaGACCCTGACAGAGCCACCC +
Preference number: 4 (lower is better)
Translates to: DPIEYKYTQYLRLLLAPGRHEGL*TLTEPP
Trigger: GGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCT...TCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATACTTATACTCTATAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp AAGTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCGGACTAGACCCTCATTaGTCCAGGCATGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: KYTQYLRLLLAPGLDPHCGLDPH*SRHEGL
Trigger: CAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCC...GCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR TCA 90 bp GACCCTATAGAGTATAAGTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGATGCCACTGTCTGCAGTaGACCAGGGGCCCAGCACAT +
Preference number: 4 (lower is better)
Translates to: DPIEYKYTQYLRLLLAPGCHCLQ*TRGPAH
Trigger: ATGTGCTGGGCCCCTGGTTCACTGCAGACAGTGGCA...TCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATACTTATACTCTATAGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CATAGAGTGGTAGCTGGCCCCATACACTGCCAGACTAAAGCCCAGGGCCAACCATTCTCTTCAAATATCTaGTTCTTCCCTCTCGTGCCC +
Preference number: 4 (lower is better)
Translates to: HRVVAGPIHCQTKAQGQPFSSNI*FFPLVP
Trigger: GGGCACGAGAGGGAAGAAGCAGATATTTGAAGAGAA...TGGTTGGCCCTGGGCTTTAGTCTGGCAGTGTATGGGGCCAGCTACCACTCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564087.2
CDS-3UTR GCA 90 bp AAGTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTGCTCTGCCATGCCCTaGTCCATGTTGAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: KYTQYLRLLLAPGLDPHCCSAMP*SMLRSM
Trigger: CATGGACCTCAACATGGAGCAGGGCATGGCAGAGCA...GCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCCAGGCATACTTTGCCCTTGGGCTaGAGAGGAATGATGAGATGC +
Preference number: 4 (lower is better)
Translates to: QYLRLLLAPGLDPHCSRHTLPLG*RGMMRC
Trigger: GCATCTCATCATTCCTCTGCAGCCCAAGGGCAAAGT...ATGCCTGGAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563953.5
CDS-3UTR CCA 90 bp GACCCTATAGAGTATAAGTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGATGCCCTTGGGCGCCATaGTGCGAGGCAAATACCCAG +
Preference number: 4 (lower is better)
Translates to: DPIEYKYTQYLRLLLAPGCPWAP*CEANTQ
Trigger: CTGGGTATTTGCCTCGCACCATGGCGCCCAAGGGCA...TCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATACTTATACTCTATAGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000565201.1
CDS-3UTR CCA 90 bp GACCCTATAGAGTATAAGTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGAGTAAAGGGCCCGGCCTaGAGCCAGAAGCCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: DPIEYKYTQYLRLLLAPGVKGPA*SQKPEG
Trigger: TCCTTCTGGCTTCTGGCTCCAGGCCGGGCCCTTTAC...TCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATACTTATACTCTATAGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
CDS-3UTR CCA 90 bp AAGTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCATTGTGCTCTGGTGCTaGGGTGCCACTGTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: KYTQYLRLLLAPGLDPHCIVLWC*GATVCS
Trigger: ACTGCAGACAGTGGCACCCCAGCACCAGAGCACAAT...GCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR CCA 90 bp AAGTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCAGGGCCAGTGGCCTGTaGCCACAATGTCAATGGCTA +
Preference number: 4 (lower is better)
Translates to: KYTQYLRLLLAPGLDPHCRASGL*PQCQWL
Trigger: TAGCCATTGACATTGTGGCCACAGGCCACTGGCCCT...GCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp ATAGAGTATAAGTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACGCTTCTTCCCTCTCGTaGCCACTTTGCCCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: IEYKYTQYLRLLLAPGLDASSLS*PLCPWA
Trigger: CGCCCAAGGGCAAAGTGGGCACGAGAGGGAAGAAGC...GTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATACTTATACTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000565201.1
CDS-3UTR CCA 90 bp AAGTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTTTCTCATTGTGCTCTaGTGCTGGGGTGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: KYTQYLRLLLAPGLDPHCFLIVL*CWGATV
Trigger: GACAGTGGCACCCCAGCACCAGAGCACAATGAGAAA...GCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR TCA 90 bp ACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCCAGGAGAGAAACGGTAACTTaGAGCAAGATGCAGGGAATA +
Preference number: 4 (lower is better)
Translates to: TQYLRLLLAPGLDPHCSRRETVT*SKMQGI
Trigger: TATTCCCTGCATCTTGCTTCAAGTTACCGTTTCTCT...CCTGGAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565201.1
CDS-3UTR GCA 90 bp ATAGAGTATAAGTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCTCATTGTGCTCTGGTaGTGGGGTGCCACTGTCTGC +
Preference number: 4 (lower is better)
Translates to: IEYKYTQYLRLLLAPGLDLIVLW*WGATVC
Trigger: GCAGACAGTGGCACCCCAGCACCAGAGCACAATGAG...GTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATACTTATACTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp ATAGAGTATAAGTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCAGAAACCGCCATGGTaGGAGGCAAATACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: IEYKYTQYLRLLLAPGLDQKPPW*EANTQP
Trigger: GGGCTGGGTATTTGCCTCGCACCATGGCGGTTTCTG...GTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATACTTATACTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563953.5
CDS-3UTR GCA 90 bp GTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCTTCTCTTCAAATATCTaGTTCTTCCCTCTCGTGCCC +
Preference number: 4 (lower is better)
Translates to: VYPIPQTAFGPWTRPSLLFSSNI*FFPLVP
Trigger: GGGCACGAGAGGGAAGAAGCAGATATTTGAAGAGAA...GAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp GACCCTATAGAGTATAAGTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGAAGAGAACGCTGCTCGTaGCATCGAGCTCATAGAGTG +
Preference number: 4 (lower is better)
Translates to: DPIEYKYTQYLRLLLAPGRERCS*HRAHRV
Trigger: CACTCTATGAGCTCGATGGCACGAGCAGCGTTCTCT...TCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATACTTATACTCTATAGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR GCA 90 bp GACCCTATAGAGTATAAGTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGAATCACATCCTTAAGGTaGTCTGCCATGCCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: DPIEYKYTQYLRLLLAPGITSLR*SAMPCS
Trigger: GGAGCAGGGCATGGCAGAGCACCTTAAGGATGTGAT...TCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATACTTATACTCTATAGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000563953.5
ENST00000565201.1
CDS-3UTR TCA 90 bp AGCCATTTATTCAACGACCCTATAGAGTATAAGTATACCCAATACCTCAGACTGTCATTGCTCCAGGCATaGGGGGCTGTGCACCCTGAC +
Preference number: 4 (lower is better)
Translates to: SHLFNDPIEYKYTQYLRLSLLQA*GAVHPD
Trigger: GTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGA...CAGTCTGAGGTATTGGGTATACTTATACTCTATAGGGTCGTTGAATAAATGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CTAAGCCATTTATTCAACGACCCTATAGAGTATAAGTATACCCAATACCTCAGACCTTGGGCGCCATGGTaGGAGGCAAATACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LSHLFNDPIEYKYTQYLRPWAPW*EANTQP
Trigger: GGGCTGGGTATTTGCCTCGCACCATGGCGCCCAAGG...TCTGAGGTATTGGGTATACTTATACTCTATAGGGTCGTTGAATAAATGGCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp AGCCATTTATTCAACGACCCTATAGAGTATAAGTATACCCAATACCTCAGACTGTATAACCGCTTCATCTaGCGCCGCTCCTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: SHLFNDPIEYKYTQYLRLYNRFI*RRSCRR
Trigger: GCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATA...CAGTCTGAGGTATTGGGTATACTTATACTCTATAGGGTCGTTGAATAAATGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000565201.1
CDS-3UTR CCA 90 bp ATAGAGTATAAGTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACACTGCTTTTGGCCCCTaGACTAGACCCTCATTGCTC +
Preference number: 4 (lower is better)
Translates to: IEYKYTQYLRLLLAPGLDTAFGP*TRPSLL
Trigger: GAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGT...GTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATACTTATACTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR TCA 90 bp AGCCATTTATTCAACGACCCTATAGAGTATAAGTATACCCAATACCTCAGACTGTGCCCTGCTCCATGTTaGGGTCCATGCCACCATCCA +
Preference number: 4 (lower is better)
Translates to: SHLFNDPIEYKYTQYLRLCPAPC*GPCHHP
Trigger: TGGATGGTGGCATGGACCTCAACATGGAGCAGGGCA...CAGTCTGAGGTATTGGGTATACTTATACTCTATAGGGTCGTTGAATAAATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000565201.1
CDS-3UTR CCA 90 bp CATTTATTCAACGACCCTATAGAGTATAAGTATACCCAATACCTCAGACTGCTTTTAAGGTGCCTGGGCTaGCGGTGGGGGACACTCACT +
Preference number: 4 (lower is better)
Translates to: HLFNDPIEYKYTQYLRLLLRCLG*RWGTLT
Trigger: AGTGAGTGTCCCCCACCGCCAGCCCAGGCACCTTAA...AAGCAGTCTGAGGTATTGGGTATACTTATACTCTATAGGGTCGTTGAATAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562235.5
CDS-3UTR CCA 90 bp AGCCATTTATTCAACGACCCTATAGAGTATAAGTATACCCAATACCTCAGACTGTTTCTCATTGTGCTCTaGTGCTGGGGTGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: SHLFNDPIEYKYTQYLRLFLIVL*CWGATV
Trigger: GACAGTGGCACCCCAGCACCAGAGCACAATGAGAAA...CAGTCTGAGGTATTGGGTATACTTATACTCTATAGGGTCGTTGAATAAATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000565201.1
CDS-3UTR CCA 90 bp CTAAGCCATTTATTCAACGACCCTATAGAGTATAAGTATACCCAATACCTCAGAAGGGCCAGTGGCCTGTaGCCACAATGTCAATGGCTA +
Preference number: 4 (lower is better)
Translates to: LSHLFNDPIEYKYTQYLRRASGL*PQCQWL
Trigger: TAGCCATTGACATTGTGGCCACAGGCCACTGGCCCT...TCTGAGGTATTGGGTATACTTATACTCTATAGGGTCGTTGAATAAATGGCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000565201.1
CDS-3UTR GCA 90 bp CTAAGCCATTTATTCAACGACCCTATAGAGTATAAGTATACCCAATACCTCAGAATCACATCCTTAAGGTaGTCTGCCATGCCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LSHLFNDPIEYKYTQYLRITSLR*SAMPCS
Trigger: GGAGCAGGGCATGGCAGAGCACCTTAAGGATGTGAT...TCTGAGGTATTGGGTATACTTATACTCTATAGGGTCGTTGAATAAATGGCTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304800.14
ENST00000565201.1
CDS-3UTR CCA 90 bp CTAAGCCATTTATTCAACGACCCTATAGAGTATAAGTATACCCAATACCTCAGAACTGCTTTTGGCCCCTaGACTAGACCCTCATTGCTC +
Preference number: 4 (lower is better)
Translates to: LSHLFNDPIEYKYTQYLRTAFGP*TRPSLL
Trigger: GAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGT...TCTGAGGTATTGGGTATACTTATACTCTATAGGGTCGTTGAATAAATGGCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000565201.1
CDS-3UTR CAA 90 bp GCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTGGTGCTGGGGTGCCCTCTCGTGCCCACTTaGCCCTTGGGCGCCATGGTG +
Preference number: 5 (lower is better)
Translates to: AAAPVGAAVSHCALVLGCPLVPT*PLGAMV
Trigger: CACCATGGCGCCCAAGGGCAAAGTGGGCACGAGAGG...GCACCCCAGCACCAGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS CCA 90 bp AAGTTACAAGTAGCTGTGCTTCTTGGGCTATCTGGGCCCCAGCCCTaGGGCCGCTCACCTGGGCTGGCGGTGGGGGACACTCACTCTGCC +
Preference number: 5 (lower is better)
Translates to: KLQVAVLLGLSGPQP*GRSPGLAVGDTHSA
Trigger: GGCAGAGTGAGTGTCCCCCACCGCCAGCCCAGGTGAGCGGCCCCAGGGCTGGGGCCCAGATAGCCCAAGAAGCACAGCTACTTGTAACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000561586.5
ENST00000563168.1
ENST00000563271.5
ENST00000567193.5
CDS-3UTR CAA 90 bp TGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCACCCAGGGCCAGTGGCTACCTCAGACTGCTTTaGGCCCCTGGACTAGACCCT +
Preference number: 5 (lower is better)
Translates to: CSRHEGLCTLTEPPRASGYLRLL*APGLDP
Trigger: AGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTA...GCCACTGGCCCTGGGTGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR CAA 90 bp GGCCACAATGTCAATGGCTATAACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCGTTAGATGCCCCTTCTaGGGAGCGCCCCCAGCCCAC +
Preference number: 5 (lower is better)
Translates to: GHNVNGYNRFICRRSCRRVRCPF*GAPPAH
Trigger: GTGGGCTGGGGGCGCTCCCAAGAAGGGGCATCTAAC...GCGCCGACAGGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGACATTGTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565201.1
CDS-3UTR CAA 90 bp CCTGACAGAGCCACCCAGGGCCAGTGGCCTGTGGCCACAATGTCAATGGCTATACCTCTCGTGCCCACTTaGCCCTTGGGCGCCATGGTG +
Preference number: 5 (lower is better)
Translates to: PDRATQGQWPVATMSMAIPLVPT*PLGAMV
Trigger: CACCATGGCGCCCAAGGGCAAAGTGGGCACGAGAGG...TATAGCCATTGACATTGTGGCCACAGGCCACTGGCCCTGGGTGGCTCTGTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR CAA 90 bp GCCCCTGGACTAGACCCTCATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACACGCTGCCGTTTCTCATaGTGCTCTGGTGCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: APGLDPHCSRHEGLCTLTRCRFS*CSGAGV
Trigger: CACCCCAGCACCAGAGCACAATGAGAAACGGCAGCG...TGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCCAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR CAA 90 bp ACCAGGGGCCCAGCACATTCACCCACAGGAGGTAAAGGGCCCGGCCTGGAGCCTTACCTCAGACTGCTTTaGGCCCCTGGACTAGACCCT +
Preference number: 5 (lower is better)
Translates to: TRGPAHSPTGGKGPGLEPYLRLL*APGLDP
Trigger: AGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTA...AGGCTCCAGGCCGGGCCCTTTACCTCCTGTGGGTGAATGTGCTGGGCCCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565201.1
CDS-3UTR CAA 90 bp CATCAGGGCCCCATCCTCAGAGAACGCTGCTCGTGCCATCGAGCTCATAGAGTGAGGATCAATCGCCTCTaGCTCGCCCGCCATGGTGCG +
Preference number: 5 (lower is better)
Translates to: HQGPILRERCSCHRAHRVRINRL*LARHGA
Trigger: CGCACCATGGCGGGCGAGCAAGAGGCGATTGATCCT...CACTCTATGAGCTCGATGGCACGAGCAGCGTTCTCTGAGGATGGGGCCCTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564087.2
CDS-3UTR CAA 90 bp GGACTAGACCCTCATTGCTCCAGGCATGAGGGGCTGTGCACCCTGACAGAGCCAATGCCCTGCTCCATGTaGAGGTCCATGCCACCATCC +
Preference number: 5 (lower is better)
Translates to: GLDPHCSRHEGLCTLTEPMPCSM*RSMPPS
Trigger: GGATGGTGGCATGGACCTCAACATGGAGCAGGGCAT...TGGCTCTGTCAGGGTGCACAGCCCCTCATGCCTGGAGCAATGAGGGTCTAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR CAA 90 bp AACCGCTTCATCTGCCGCCGCTCCTGTCGGCGCTGCCGTTTCTCATTGTGCTCTATGCCCTGCTCCATGTaGAGGTCCATGCCACCATCC +
Preference number: 5 (lower is better)
Translates to: NRFICRRSCRRCRFSLCSMPCSM*RSMPPS
Trigger: GGATGGTGGCATGGACCTCAACATGGAGCAGGGCAT...AGAGCACAATGAGAAACGGCAGCGCCGACAGGAGCGGCGGCAGATGAAGCGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR CAA 90 bp TGGCCTGTGGCCACAATGTCAATGGCTATAACCGCTTCATCTGCCGCCGCTCCTCGCTGCCGTTTCTCATaGTGCTCTGGTGCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: WPVATMSMAITASSAAAPRCRFS*CSGAGV
Trigger: CACCCCAGCACCAGAGCACAATGAGAAACGGCAGCG...AGGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGACATTGTGGCCACAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562235.5
ENST00000565201.1
CDS-3UTR CAA 90 bp ACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCCAGGCGCTGCCGTTTCTCATaGTGCTCTGGTGCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: TQYLRLLLAPGLDPHCSRRCRFS*CSGAGV
Trigger: CACCCCAGCACCAGAGCACAATGAGAAACGGCAGCG...CCTGGAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS GCA 90 bp TGCTCGTGCCATCGAGCTCATAGAGTGGTAGCTGGCCCCATACACTaGCAGACTAAAGCCCAGGGCCAACTGCAGAGCAAGAATGAGGGT +
Preference number: 5 (lower is better)
Translates to: CSCHRAHRVVAGPIH*QTKAQGQLQSKNEG
Trigger: ACCCTCATTCTTGCTCTGCAGTTGGCCCTGGGCTTTAGTCTGGCAGTGTATGGGGCCAGCTACCACTCTATGAGCTCGATGGCACGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563168.1
CDS-3UTR CAA 90 bp CCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCCAGGCAGTGCCCACTTTGCCCTaGGGCTGCAGAGGAATGATG +
Preference number: 5 (lower is better)
Translates to: PIPQTAFGPWTRPSLLQAVPTLP*GCRGMM
Trigger: CATCATTCCTCTGCAGCCCAAGGGCAAAGTGGGCAC...TGCCTGGAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563953.5
CDS TCA 90 bp AGGGCCAACTGCAGAGCAAGAATGAGGGTATCAAAGGCCAGCCACTaGCCCTACGCACTCATCCACCTCCCAGGATGGAGATACTTACCC +
Preference number: 5 (lower is better)
Translates to: RANCRARMRVSKASH*PYALIHLPGWRYLP
Trigger: GGGTAAGTATCTCCATCCTGGGAGGTGGATGAGTGCGTAGGGTCAGTGGCTGGCCTTTGATACCCTCATTCTTGCTCTGCAGTTGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563168.1
CDS-3UTR CAA 90 bp CCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCATTGCTCCAGGCATACCTCAGACTGCTTTaGGCCCCTGGACTAGACCCT +
Preference number: 5 (lower is better)
Translates to: PIPQTAFGPWTRPSLLQAYLRLL*APGLDP
Trigger: AGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTA...TGCCTGGAGCAATGAGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS-3UTR CAA 90 bp ATAGAGTATAAGTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCCTCTCGTGCCCACTTaGCCCTTGGGCGCCATGGTG +
Preference number: 5 (lower is better)
Translates to: IEYKYTQYLRLLLAPGLDPLVPT*PLGAMV
Trigger: CACCATGGCGCCCAAGGGCAAAGTGGGCACGAGAGG...GTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATACTTATACTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000565201.1
CDS-3UTR CAA 90 bp AAGGCAGTAAATGGCATTGGCCCCCAGTATGATCCGCAGGTAGAACTTCAGAGTGTGCCCACTTTGCCCTaGGGCTGCAGAGGAATGATG +
Preference number: 5 (lower is better)
Translates to: KAVNGIGPQYDPQVELQSVPTLP*GCRGMM
Trigger: CATCATTCCTCTGCAGCCCAAGGGCAAAGTGGGCAC...ACTCTGAAGTTCTACCTGCGGATCATACTGGGGGCCAATGCCATTTACTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564087.2
CDS TCA 90 bp GTTGGGGTCAGAAGTTACCTCCAAACCATGGGTCTCCCTCAACTCTaGCCAAGAATTAGGCCAGGCTGTGGGAGGAGCAAGGTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: VGVRSYLQTMGLPQL*PRIRPGCGRSKVVL
Trigger: AAGAACAACCTTGCTCCTCCCACAGCCTGGCCTAATTCTTGGTCAGAGTTGAGGGAGACCCATGGTTTGGAGGTAACTTCTGACCCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563168.1
CDS CCA 90 bp AGCAATCACAGGATCAGGTTGGGGTCAGAAGTTACCTCCAAACCATaGGTCTCCCTCAACTCTGACCAAGAATTAGGCCAGGCTGTGGGA +
Preference number: 5 (lower is better)
Translates to: SNHRIRLGSEVTSKP*VSLNSDQELGQAVG
Trigger: TCCCACAGCCTGGCCTAATTCTTGGTCAGAGTTGAGGGAGACCCATGGTTTGGAGGTAACTTCTGACCCCAACCTGATCCTGTGATTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563168.1
CDS CCA 90 bp CGTCACAAGGCAGTAAATGGCCTGCAAGCAATCACAGGATCAGGTTaGGGTCAGAAGTTACCTCCAAACCATGGGTCTCCCTCAACTCTG +
Preference number: 5 (lower is better)
Translates to: RHKAVNGLQAITGSG*GQKLPPNHGSPSTL
Trigger: CAGAGTTGAGGGAGACCCATGGTTTGGAGGTAACTTCTGACCCCAACCTGATCCTGTGATTGCTTGCAGGCCATTTACTGCCTTGTGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563168.1
CDS-3UTR CAA 90 bp GTGGCCTGTGGCCACAATGTCAATGGCTATAACCGCTTCATCTGCCGCCGCTCCAAGAGAAACGGTAACTaGAAGCAAGATGCAGGGAAT +
Preference number: 5 (lower is better)
Translates to: VACGHNVNGYNRFICRRSKRNGN*KQDAGN
Trigger: ATTCCCTGCATCTTGCTTCAAGTTACCGTTTCTCTT...GGAGCGGCGGCAGATGAAGCGGTTATAGCCATTGACATTGTGGCCACAGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565201.1
CDS-3UTR CAA 90 bp ATAGAGTATAAGTATACCCAATACCTCAGACTGCTTTTGGCCCCTGGACTAGACCGCTGCCGTTTCTCATaGTGCTCTGGTGCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: IEYKYTQYLRLLLAPGLDRCRFS*CSGAGV
Trigger: CACCCCAGCACCAGAGCACAATGAGAAACGGCAGCG...GTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTATTGGGTATACTTATACTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000563953.5
ENST00000565201.1
CDS CCA 90 bp ATGAGGCAGATGAGTAAAAGAAGACCAACGTCACAAGGCAGTAAATaGCCTGCAAGCAATCACAGGATCAGGTTGGGGTCAGAAGTTACC +
Preference number: 5 (lower is better)
Translates to: MRQMSKRRPTSQGSK*PASNHRIRLGSEVT
Trigger: GGTAACTTCTGACCCCAACCTGATCCTGTGATTGCTTGCAGGCCATTTACTGCCTTGTGACGTTGGTCTTCTTTTACTCATCTGCCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563168.1
CDS-3UTR CAA 90 bp CTAAGCCATTTATTCAACGACCCTATAGAGTATAAGTATACCCAATACCTCAGATACCTCAGACTGCTTTaGGCCCCTGGACTAGACCCT +
Preference number: 5 (lower is better)
Translates to: LSHLFNDPIEYKYTQYLRYLRLL*APGLDP
Trigger: AGGGTCTAGTCCAGGGGCCAAAAGCAGTCTGAGGTA...TCTGAGGTATTGGGTATACTTATACTCTATAGGGTCGTTGAATAAATGGCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304800.14
ENST00000562235.5
ENST00000565201.1
CDS GCA 72 bp AATCCCTGGGATGTCCACCCATCCTCCAGTCCATTCTaGCTAGGGCTGACGCCATCTCTCCAGCACCCGCAG +
Preference number: 6 (lower is better)
Translates to: NPWDVHPSSSPF*LGLTPSLQHPQ
Trigger: CTGCGGGTGCTGGAGAGATGGCGTCAGCCCTAGGCAGAATGGACTGGAGGATGGGTGGACATCCCAGGGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564087.2
ENST00000566486.1
CDS CAA 72 bp ACATCCTTAAGGTGCTCTGCCATGCCCTGCTCCATGTaGAGGTCCATGCCACCATCCATCAGGGCCCCATCC +
Preference number: 6 (lower is better)
Translates to: TSLRCSAMPCSM*RSMPPSIRAPS
Trigger: GGATGGGGCCCTGATGGATGGTGGCATGGACCTCAACATGGAGCAGGGCATGGCAGAGCACCTTAAGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000563426.5
ENST00000563953.5
ENST00000565201.1
CDS GCA 72 bp CATCGAGCTCATAGAGTGGTAGCTGGCCCCATACACTaGCAGACTAAAGCCCAGGGCCAACTGCAGAGCAAG +
Preference number: 6 (lower is better)
Translates to: HRAHRVVAGPIH*QTKAQGQLQSK
Trigger: CTTGCTCTGCAGTTGGCCCTGGGCTTTAGTCTGGCAGTGTATGGGGCCAGCTACCACTCTATGAGCTCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563168.1
CDS CAA 90 bp AGTAGGATCACATCCTTAAGGTGCTCTGCCATGCCCTGCTCCATGTaGAGGTCCATGCCACCATCCATCAGGGCCCCATCCTCAGAGAAC +
Preference number: 6 (lower is better)
Translates to: SRITSLRCSAMPCSM*RSMPPSIRAPSSEN
Trigger: GTTCTCTGAGGATGGGGCCCTGATGGATGGTGGCATGGACCTCAACATGGAGCAGGGCATGGCAGAGCACCTTAAGGATGTGATCCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304800.14
ENST00000563426.5
ENST00000563953.5
ENST00000565201.1
CDS TCA 72 bp TGCAGAGCAAGAATGAGGGTATCAAAGGCCAGCCACTaGCCCTACGCACTCATCCACCTCCCAGGATGGAGA +
Preference number: 6 (lower is better)
Translates to: CRARMRVSKASH*PYALIHLPGWR
Trigger: TCTCCATCCTGGGAGGTGGATGAGTGCGTAGGGTCAGTGGCTGGCCTTTGATACCCTCATTCTTGCTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563168.1
CDS GCA 72 bp GAAACCGCAATCACTAAGCACCACATCGGCAGCTCATaGACTTCCGGCGCAGACCGAAGTCGTCAGCTTTTG +
Preference number: 6 (lower is better)
Translates to: ETAITKHHIGSS*TSGADRSRQLL
Trigger: CAAAAGCTGACGACTTCGGTCTGCGCCGGAAGTGCATGAGCTGCCGATGTGGTGCTTAGTGATTGCGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567193.5
CDS CAA 72 bp CCAGGCTGTGGGAGGAGCAAGGTTGTTCTTACAGGGTaGAAGAAAGGGCCCTGCTCCCTGAATCCCAAATAC +
Preference number: 6 (lower is better)
Translates to: PGCGRSKVVLTG*KKGPCSLNPKY
Trigger: GTATTTGGGATTCAGGGAGCAGGGCCCTTTCTTCAACCCTGTAAGAACAACCTTGCTCCTCCCACAGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563168.1
ENST00000566486.1
CDS CCA 72 bp GCAGTAAATGGCCTGCAAGCAATCACAGGATCAGGTTaGGGTCAGAAGTTACCTCCAAACCATGGGTCTCCC +
Preference number: 6 (lower is better)
Translates to: AVNGLQAITGSG*GQKLPPNHGSP
Trigger: GGGAGACCCATGGTTTGGAGGTAACTTCTGACCCCAACCTGATCCTGTGATTGCTTGCAGGCCATTTACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563168.1
CDS CAA 90 bp ACGTCACAAGGCAGTAAATGGCCTGCAAGCAATCACAGGATCAGGTaGGGGTCAGAAGTTACCTCCAAACCATGGGTCTCCCTCAACTCT +
Preference number: 6 (lower is better)
Translates to: TSQGSKWPASNHRIR*GSEVTSKPWVSLNS
Trigger: AGAGTTGAGGGAGACCCATGGTTTGGAGGTAACTTCTGACCCCAACCTGATCCTGTGATTGCTTGCAGGCCATTTACTGCCTTGTGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563168.1
CDS CCA 72 bp AGGATCAGGTTGGGGTCAGAAGTTACCTCCAAACCATaGGTCTCCCTCAACTCTGACCAAGAATTAGGCCAG +
Preference number: 6 (lower is better)
Translates to: RIRLGSEVTSKP*VSLNSDQELGQ
Trigger: CTGGCCTAATTCTTGGTCAGAGTTGAGGGAGACCCATGGTTTGGAGGTAACTTCTGACCCCAACCTGATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563168.1
CDS CAA 72 bp CACCCAACTCAGCCCAGGAAAGAAGCCTTTGTGTACTaGGAGGTAGGAAGAGCTCTCAAATTCAGCTACGAC +
Preference number: 6 (lower is better)
Translates to: HPTQPRKEAFVY*EVGRALKFSYD
Trigger: GTCGTAGCTGAATTTGAGAGCTCTTCCTACCTCCAAGTACACAAAGGCTTCTTTCCTGGGCTGAGTTGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563168.1
ENST00000566486.1
CDS CCA 72 bp ATGAGTAAAAGAAGACCAACGTCACAAGGCAGTAAATaGCCTGCAAGCAATCACAGGATCAGGTTGGGGTCA +
Preference number: 6 (lower is better)
Translates to: MSKRRPTSQGSK*PASNHRIRLGS
Trigger: TGACCCCAACCTGATCCTGTGATTGCTTGCAGGCCATTTACTGCCTTGTGACGTTGGTCTTCTTTTACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563168.1
CDS CAA 90 bp ATAAAGCTGGAAAGACAGCATATGGGCCCTTCCACCCTTTTCAAGTaGCAACTCCCTTCCACCCTTTTCAAGTTACAAGTAGCTGTGCTT +
Preference number: 6 (lower is better)
Translates to: IKLERQHMGPSTLFK*QLPSTLFKLQVAVL
Trigger: AAGCACAGCTACTTGTAACTTGAAAAGGGTGGAAGGGAGTTGCAACTTGAAAAGGGTGGAAGGGCCCATATGCTGTCTTTCCAGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000561586.5
ENST00000563168.1
ENST00000563271.5
ENST00000564649.1
ENST00000567193.5