RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM204 (Homo sapiens)

Ensembl gene IDs: ENSG00000131634

Ensembl transcript IDs: ENST00000253934.9, ENST00000566264.2

Found 225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCGCACGCATGGCGCAGAGGTCACCCAGACTCATCCCGTGCCTCTaGACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCCTTGGTTTC +
Preference number: 1 (lower is better)
Translates to: LARMAQRSPRLIPCL*TSRGSDLVVESLGF
Trigger: GAAACCAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR GCA 90 bp ACGTGTCTCGCACGCATGGCGCAGAGGTCACCCAGACTCATCCCGTaGCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCCTT +
Preference number: 1 (lower is better)
Translates to: TCLARMAQRSPRLIP*LCTSRGSDLVVESL
Trigger: AAGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCGAGACACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR GCA 90 bp GCTTCCAGCTTCCACCCTGAAGTGCGTGTGGTCGTGGAGCCGCGTTaGGCTAACCAGGAAAGCTGGAGGCAGAACGAGGTTGGCCCACGA +
Preference number: 1 (lower is better)
Translates to: ASSFHPEVRVVVEPR*ANQESWRQNEVGPR
Trigger: TCGTGGGCCAACCTCGTTCTGCCTCCAGCTTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTCAGGGTGGAAGCTGGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR CCA 90 bp CCTGTGTCTCAGCTTCCAGCTTCCACCCTGAAGTGCGTGTGGTCGTaGAGCCGCGTTGCGCTAACCAGGAAAGCTGGAGGCAGAACGAGG +
Preference number: 1 (lower is better)
Translates to: PVSQLPASTLKCVWS*SRVALTRKAGGRTR
Trigger: CCTCGTTCTGCCTCCAGCTTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTCAGGGTGGAAGCTGGAAGCTGAGACACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR CCA 90 bp GACTCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTaGAGTCCCTTGGTTTCTAGGCTGTTCCACGATAGCAGGTGTGCG +
Preference number: 1 (lower is better)
Translates to: DSSRASARAGEVTWW*SPLVSRLFHDSRCA
Trigger: CGCACACCTGCTATCGTGGAACAGCCTAGAAACCAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR CCA 90 bp CACCCAGACTCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTaGTGGTGGAGTCCCTTGGTTTCTAGGCTGTTCCACGATAGCAGG +
Preference number: 1 (lower is better)
Translates to: HPDSSRASARAGEVT*WWSPLVSRLFHDSR
Trigger: CCTGCTATCGTGGAACAGCCTAGAAACCAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR CCA 90 bp GAAGTGCGTGTGGTCGTGGAGCCGCGTTGCGCTAACCAGGAAAGCTaGAGGCAGAACGAGGTTGGCCCACGACACGTACAGACATATGAC +
Preference number: 1 (lower is better)
Translates to: EVRVVVEPRCANQES*RQNEVGPRHVQTYD
Trigger: GTCATATGTCTGTACGTGTCGTGGGCCAACCTCGTTCTGCCTCCAGCTTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR TCA 90 bp GAGGTCACCCAGACTCATCCCGTGCCTCTGCACGAGCAGGGGAAGTaGCTTGGTGGTGGAGTCCCTTGGTTTCTAGGCTGTTCCACGATA +
Preference number: 1 (lower is better)
Translates to: EVTQTHPVPLHEQGK*LGGGVPWFLGCSTI
Trigger: TATCGTGGAACAGCCTAGAAACCAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCTGGGTGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR CCA 90 bp CCAGACTCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTaGTGGAGTCCCTTGGTTTCTAGGCTGTTCCACGATAGCAGGTGT +
Preference number: 1 (lower is better)
Translates to: PDSSRASARAGEVTW*WSPLVSRLFHDSRC
Trigger: ACACCTGCTATCGTGGAACAGCCTAGAAACCAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR CCA 90 bp ACATATGACCGACATAACAGTAAACGCACACGTGTCTCGCACGCATaGCGCAGAGGTCACCCAGACTCATCCCGTGCCTCTGCACGAGCA +
Preference number: 1 (lower is better)
Translates to: TYDRHNSKRTRVSHA*RRGHPDSSRASARA
Trigger: TGCTCGTGCAGAGGCACGGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCGAGACACGTGTGCGTTTACTGTTATGTCGGTCATATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR-3UTR GCA 90 bp GAAGTGCGTGTGGTCGTGGAGCCGCGTTGCGCTAACCAGGAAAGCTGGAGGCAGCCCAGACTCATCCCGTaGCTCTGCACGAGCAGGGGA +
Preference number: 2 (lower is better)
Translates to: EVRVVVEPRCANQESWRQPRLIP*LCTSRG
Trigger: TCCCCTGCTCGTGCAGAGGCACGGGATGAGTCTGGG...CTGCCTCCAGCTTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR-3UTR TCA 90 bp AACGCACACGTGTCTCGCACGCATGGCGCAGAGGTCACCCAGACTCATCCCGTGCACGAGCAGGGGAAGTaGCTTGGTGGTGGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: NAHVSRTHGAEVTQTHPVHEQGK*LGGGVP
Trigger: AGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTG...CACGGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCGAGACACGTGTGCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR-3UTR CCA 90 bp GTCTCGCACGCATGGCGCAGAGGTCACCCAGACTCATCCCGTGCCTCTGCACGAGGTGGTGGAGTCCCTTaGTTTCTAGGCTGTTCCACG +
Preference number: 2 (lower is better)
Translates to: VSHAWRRGHPDSSRASARGGGVP*FLGCST
Trigger: CGTGGAACAGCCTAGAAACCAAGGGACTCCACCACC...TCGTGCAGAGGCACGGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR-3UTR TCA 90 bp AGGTCACCCAGACTCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGATAGCAGGTGTGCGTTaGTGGAGCGCTGAGAAGGGC +
Preference number: 2 (lower is better)
Translates to: RSPRLIPCLCTSRGSDLVIAGVR*WSAEKG
Trigger: GCCCTTCTCAGCGCTCCATCAACGCACACCTGCTAT...CACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCTGGGTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR CAA 90 bp CGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCCTaGGTTTCTAGGCTGTTCCACGATAGCAGGTGTGCGTTGATGGAG +
Preference number: 2 (lower is better)
Translates to: RASARAGEVTWWWSP*VSRLFHDSRCALME
Trigger: CTCCATCAACGCACACCTGCTATCGTGGAACAGCCTAGAAACCAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR-3UTR CCA 90 bp AGTAAACGCACACGTGTCTCGCACGCATGGCGCAGAGGTCACCCAGACTCATCCGCAGGGGAAGTGACTTaGTGGTGGAGTCCCTTGGTT +
Preference number: 2 (lower is better)
Translates to: SKRTRVSHAWRRGHPDSSAGEVT*WWSPLV
Trigger: AACCAAGGGACTCCACCACCAAGTCACTTCCCCTGC...GGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCGAGACACGTGTGCGTTTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR-3UTR TCA 90 bp GAAAGCTGGAGGCAGAACGAGGTTGGCCCACGACACGTACAGACATATGACCGAATAGCAGGTGTGCGTTaGTGGAGCGCTGAGAAGGGC +
Preference number: 2 (lower is better)
Translates to: ESWRQNEVGPRHVQTYDRIAGVR*WSAEKG
Trigger: GCCCTTCTCAGCGCTCCATCAACGCACACCTGCTAT...TCGGTCATATGTCTGTACGTGTCGTGGGCCAACCTCGTTCTGCCTCCAGCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR-3UTR CCA 90 bp GCTTCCACCCTGAAGTGCGTGTGGTCGTGGAGCCGCGTTGCGCTAACCAGGAAAGAAGTGACTTGGTGGTaGAGTCCCTTGGTTTCTAGG +
Preference number: 2 (lower is better)
Translates to: ASTLKCVWSWSRVALTRKEVTWW*SPLVSR
Trigger: CCTAGAAACCAAGGGACTCCACCACCAAGTCACTTC...TTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTCAGGGTGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR-3UTR CCA 90 bp TTTCTGCTTTACCAAAGTGTAAGATATGGCTGGGGTGCCCCTCTCAGCAGATGCACCCTGAAGTGCGTGTaGTCGTGGAGCCGCGTTGCG +
Preference number: 2 (lower is better)
Translates to: FLLYQSVRYGWGAPLSRCTLKCV*SWSRVA
Trigger: CGCAACGCGGCTCCACGACCACACGCACTTCAGGGT...GCATCTGCTGAGAGGGGCACCCCAGCCATATCTTACACTTTGGTAAAGCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR CAA 90 bp TGGAGCCGCGTTGCGCTAACCAGGAAAGCTGGAGGCAGAACGAGGTaGGCCCACGACACGTACAGACATATGACCGACATAACAGTAAAC +
Preference number: 2 (lower is better)
Translates to: WSRVALTRKAGGRTR*AHDTYRHMTDITVN
Trigger: GTTTACTGTTATGTCGGTCATATGTCTGTACGTGTCGTGGGCCAACCTCGTTCTGCCTCCAGCTTTCCTGGTTAGCGCAACGCGGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR-3UTR CCA 90 bp TATGACCGACATAACAGTAAACGCACACGTGTCTCGCACGCATGGCGCAGAGGTGGGGAAGTGACTTGGTaGTGGAGTCCCTTGGTTTCT +
Preference number: 2 (lower is better)
Translates to: YDRHNSKRTRVSHAWRRGGEVTW*WSPLVS
Trigger: AGAAACCAAGGGACTCCACCACCAAGTCACTTCCCC...ACCTCTGCGCCATGCGTGCGAGACACGTGTGCGTTTACTGTTATGTCGGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR-3UTR CCA 90 bp TTTCTGCTTTACCAAAGTGTAAGATATGGCTGGGGTGCCCCTCTCAGCAGATGCGGGGAAGTGACTTGGTaGTGGAGTCCCTTGGTTTCT +
Preference number: 2 (lower is better)
Translates to: FLLYQSVRYGWGAPLSRCGEVTW*WSPLVS
Trigger: AGAAACCAAGGGACTCCACCACCAAGTCACTTCCCC...GCATCTGCTGAGAGGGGCACCCCAGCCATATCTTACACTTTGGTAAAGCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR-3UTR CCA 90 bp GAATCGAGCAAAACAGACACGAACACGATTCTGTCTGAAACCATCACTAACCGGGAGGCAGAACGAGGTTaGCCCACGACACGTACAGAC +
Preference number: 2 (lower is better)
Translates to: ESSKTDTNTILSETITNREAERG*PTTRTD
Trigger: GTCTGTACGTGTCGTGGGCCAACCTCGTTCTGCCTC...CCGGTTAGTGATGGTTTCAGACAGAATCGTGTTCGTGTCTGTTTTGCTCGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR-3UTR CCA 90 bp GGAAAAGAATCGAGCAAAACAGACACGAACACGATTCTGTCTGAAACCATCACTAAGTGCGTGTGGTCGTaGAGCCGCGTTGCGCTAACC +
Preference number: 2 (lower is better)
Translates to: GKESSKTDTNTILSETITKCVWS*SRVALT
Trigger: GGTTAGCGCAACGCGGCTCCACGACCACACGCACTT...AGTGATGGTTTCAGACAGAATCGTGTTCGTGTCTGTTTTGCTCGATTCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR GCA 72 bp GCACGCATGGCGCAGAGGTCACCCAGACTCATCCCGTaGCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTG +
Preference number: 3 (lower is better)
Translates to: ARMAQRSPRLIP*LCTSRGSDLVV
Trigger: CACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR GCA 72 bp ATGGCGCAGAGGTCACCCAGACTCATCCCGTGCCTCTaGACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCC +
Preference number: 3 (lower is better)
Translates to: MAQRSPRLIPCL*TSRGSDLVVES
Trigger: GGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCTGGGTGACCTCTGCGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR CCA 72 bp GTGGTCGTGGAGCCGCGTTGCGCTAACCAGGAAAGCTaGAGGCAGAACGAGGTTGGCCCACGACACGTACAG +
Preference number: 3 (lower is better)
Translates to: VVVEPRCANQES*RQNEVGPRHVQ
Trigger: CTGTACGTGTCGTGGGCCAACCTCGTTCTGCCTCCAGCTTTCCTGGTTAGCGCAACGCGGCTCCACGACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR CCA 72 bp GTGTCTCAGCTTCCAGCTTCCACCCTGAAGTGCGTGTaGTCGTGGAGCCGCGTTGCGCTAACCAGGAAAGCT +
Preference number: 3 (lower is better)
Translates to: VSQLPASTLKCV*SWSRVALTRKA
Trigger: AGCTTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTCAGGGTGGAAGCTGGAAGCTGAGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR TCA 72 bp CAGACTCATCCCGTGCCTCTGCACGAGCAGGGGAAGTaGCTTGGTGGTGGAGTCCCTTGGTTTCTAGGCTGT +
Preference number: 3 (lower is better)
Translates to: QTHPVPLHEQGK*LGGGVPWFLGC
Trigger: ACAGCCTAGAAACCAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR CCA 72 bp CGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTaGAGTCCCTTGGTTTCTAGGCTGTTCCACGATAGC +
Preference number: 3 (lower is better)
Translates to: RASARAGEVTWW*SPLVSRLFHDS
Trigger: GCTATCGTGGAACAGCCTAGAAACCAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR CCA 72 bp TCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTaGTGGAGTCCCTTGGTTTCTAGGCTGTTCCACGAT +
Preference number: 3 (lower is better)
Translates to: SRASARAGEVTW*WSPLVSRLFHD
Trigger: ATCGTGGAACAGCCTAGAAACCAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR CCA 72 bp TCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTaGTGGTGGAGTCCCTTGGTTTCTAGGCTGTTCCAC +
Preference number: 3 (lower is better)
Translates to: SSRASARAGEVT*WWSPLVSRLFH
Trigger: GTGGAACAGCCTAGAAACCAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR CCA 72 bp CGACATAACAGTAAACGCACACGTGTCTCGCACGCATaGCGCAGAGGTCACCCAGACTCATCCCGTGCCTCT +
Preference number: 3 (lower is better)
Translates to: RHNSKRTRVSHA*RRGHPDSSRAS
Trigger: AGAGGCACGGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCGAGACACGTGTGCGTTTACTGTTATGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR-3UTR CAA 90 bp TGCCCCTCTCAGCAGATGCAGAATAAATTAATCCCAAAGCAAAGCGGAGCGCAGTGGTGGTGGAGTCCCTaGGTTTCTAGGCTGTTCCAC +
Preference number: 3 (lower is better)
Translates to: CPSQQMQNKLIPKQSGAQWWWSP*VSRLFH
Trigger: GTGGAACAGCCTAGAAACCAAGGGACTCCACCACCA...CTGCGCTCCGCTTTGCTTTGGGATTAATTTATTCTGCATCTGCTGAGAGGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR-3UTR CAA 90 bp GGAAAAGAATCGAGCAAAACAGACACGAACACGATTCTGTCTGAAACCATCACTTGGTGGTGGAGTCCCTaGGTTTCTAGGCTGTTCCAC +
Preference number: 3 (lower is better)
Translates to: GKESSKTDTNTILSETITWWWSP*VSRLFH
Trigger: GTGGAACAGCCTAGAAACCAAGGGACTCCACCACCA...AGTGATGGTTTCAGACAGAATCGTGTTCGTGTCTGTTTTGCTCGATTCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp AGGTCACCCAGACTCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGCGGAGGCCGGCCTGTaGCGCGCGTGCCTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: RSPRLIPCLCTSRGSDLVAEAGL*RACLFS
Trigger: CGAGAAGAGGCACGCGCGGCACAGGCCGGCCTCCGC...CACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCTGGGTGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp ATGGCGCAGAGGTCACCCAGACTCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGGGATGGTCCAGGTGTaGCGCCTCTCGGCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: MAQRSPRLIPCLCTSRGSGMVQV*RLSARP
Trigger: AGGCCGGGCCGAGAGGCGGCACACCTGGACCATCCC...ACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCTGGGTGACCTCTGCGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp GAAGTGCGTGTGGTCGTGGAGCCGCGTTGCGCTAACCAGGAAAGCTGGAGGCAGAGGCTCCGGGCAGGGTaGCCGGTGTGGAGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: EVRVVVEPRCANQESWRQRLRAG*PVWSGF
Trigger: GAACCCGCTCCACACCGGCCACCCTGCCCGGAGCCT...CTGCCTCCAGCTTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS-3UTR CCA 90 bp AGGTCACCCAGACTCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGGAGGCCGGCAGCAGTaGGAGTCGAGCCCGCGCCAC +
Preference number: 4 (lower is better)
Translates to: RSPRLIPCLCTSRGSDLVGGRQQ*ESSPRH
Trigger: GTGGCGCGGGCTCGACTCCCACTGCTGCCGGCCTCC...CACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCTGGGTGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS-3UTR TCA 90 bp GCTTCCACCCTGAAGTGCGTGTGGTCGTGGAGCCGCGTTGCGCTAACCAGGAAAAGCACCGGCCTGCTGTaGGTGCCAGGCTCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASTLKCVWSWSRVALTRKSTGLL*VPGSGQ
Trigger: CTGCCCGGAGCCTGGCACTCACAGCAGGCCGGTGCT...TTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTCAGGGTGGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS-3UTR GCA 90 bp GCTTCCACCCTGAAGTGCGTGTGGTCGTGGAGCCGCGTTGCGCTAACCAGGAAAGGCCTGTGCCGCGCGTaGCTCTTCTCGCCGGGACCA +
Preference number: 4 (lower is better)
Translates to: ASTLKCVWSWSRVALTRKGLCRA*LFSPGP
Trigger: TGGTCCCGGCGAGAAGAGGCACGCGCGGCACAGGCC...TTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTCAGGGTGGAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253934.9
CDS-3UTR GCA 90 bp GAAGTGCGTGTGGTCGTGGAGCCGCGTTGCGCTAACCAGGAAAGCTGGAGGCAGACCCAGGGCCAGGAGTaGGCCGTCTTCCCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: EVRVVVEPRCANQESWRQTQGQE*AVFPGS
Trigger: GCTTCCCGGGAAGACGGCGCACTCCTGGCCCTGGGT...CTGCCTCCAGCTTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp GTAAACGCACACGTGTCTCGCACGCATGGCGCAGAGGTCACCCAGACTCATCCCGGGATGGTCCAGGTGTaGCGCCTCTCGGCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: VNAHVSRTHGAEVTQTHPGMVQV*RLSARP
Trigger: AGGCCGGGCCGAGAGGCGGCACACCTGGACCATCCC...GGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCGAGACACGTGTGCGTTTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp CCAGACTCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTGGAGTGCCCCACGCTGCGCCTaGGCCCATCCTCCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: PDSSRASARAGEVTWWWSAPRCA*AHPPAS
Trigger: AGACGCTGGAGGATGGGCGCAGGCGCAGCGTGGGGC...ACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp GTAAACGCACACGTGTCTCGCACGCATGGCGCAGAGGTCACCCAGACTCATCCCGAAGGTGAGCTGGCCTaGGGTGAGCGCGGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: VNAHVSRTHGAEVTQTHPEGELA*GERGRG
Trigger: GCCACGGCCGCGCTCACCGCAGGCCAGCTCACCTTC...GGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCGAGACACGTGTGCGTTTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp TTCCACCCTGAAGTGCGTGTGGTCGTGGAGCCGCGTTGCGCTAACCAGGAAAGCGAAGGTGAGCTGGCCTaGGGTGAGCGCGGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: FHPEVRVVVEPRCANQESEGELA*GERGRG
Trigger: GCCACGGCCGCGCTCACCGCAGGCCAGCTCACCTTC...GCTTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTCAGGGTGGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR TCA 90 bp AGACTCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCCTGCACGGTCATCGCTaGCGCCGGTGCCGCCGCTTA +
Preference number: 4 (lower is better)
Translates to: RLIPCLCTSRGSDLVVESLHGHR*RRCRRL
Trigger: TAAGCGGCGGCACCGGCGTCAGCGATGACCGTGCAG...GGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR TCA 90 bp GCTTCCACCCTGAAGTGCGTGTGGTCGTGGAGCCGCGTTGCGCTAACCAGGAAACTGCACGGTCATCGCTaGCGCCGGTGCCGCCGCTTA +
Preference number: 4 (lower is better)
Translates to: ASTLKCVWSWSRVALTRKLHGHR*RRCRRL
Trigger: TAAGCGGCGGCACCGGCGTCAGCGATGACCGTGCAG...TTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTCAGGGTGGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR TCA 90 bp CGCACGCATGGCGCAGAGGTCACCCAGACTCATCCCGTGCCTCTGCACGAGCAGCACGAGCAGGGGAAGTaGCTTGGTGGTGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: RTHGAEVTQTHPVPLHEQHEQGK*LGGGVP
Trigger: AGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTG...CTGCTCGTGCAGAGGCACGGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp AACGCACACGTGTCTCGCACGCATGGCGCAGAGGTCACCCAGACTCATCCCGTGGCGGCCACGAGTCTCTaGACGGTCATCGCTGACGCC +
Preference number: 4 (lower is better)
Translates to: NAHVSRTHGAEVTQTHPVAATSL*TVIADA
Trigger: GGCGTCAGCGATGACCGTGCAGAGACTCGTGGCCGC...CACGGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCGAGACACGTGTGCGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp ATGGCGCAGAGGTCACCCAGACTCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGCGGCCACGAGTCTCTaGACGGTCATCGCTGACGCC +
Preference number: 4 (lower is better)
Translates to: MAQRSPRLIPCLCTSRGSAATSL*TVIADA
Trigger: GGCGTCAGCGATGACCGTGCAGAGACTCGTGGCCGC...ACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCTGGGTGACCTCTGCGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp CGCACGCATGGCGCAGAGGTCACCCAGACTCATCCCGTGCCTCTGCACGAGCAGGTCGTGGAGCCGCGTTaGGCTAACCAGGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: RTHGAEVTQTHPVPLHEQVVEPR*ANQESW
Trigger: CCAGCTTTCCTGGTTAGCGCAACGCGGCTCCACGAC...CTGCTCGTGCAGAGGCACGGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp AGACTCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCGCAGGGACGCCCGTGTaGGCAGAGCTCGCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: RLIPCLCTSRGSDLVVESAGTPV*AELAFP
Trigger: AGGGAAGGCGAGCTCTGCGCACACGGGCGTCCCTGC...GGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS-3UTR CCA 90 bp AACGCACACGTGTCTCGCACGCATGGCGCAGAGGTCACCCAGACTCATCCCGTGCCTCCTTCCTGCACCTaGAGCAGGGCCAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: NAHVSRTHGAEVTQTHPVPPSCT*SRARPV
Trigger: CACAGGCCTGGCCCTGCTCCAGGTGCAGGAAGGAGG...CACGGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCGAGACACGTGTGCGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp GTAAACGCACACGTGTCTCGCACGCATGGCGCAGAGGTCACCCAGACTCATCCCTCATGTGCGTCCACCTaGCCGGCTCTGGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: VNAHVSRTHGAEVTQTHPSCAST*PALAPG
Trigger: CCCTGGGGCCAGAGCCGGCCAGGTGGACGCACATGA...GGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCGAGACACGTGTGCGTTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp TCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCCTTGGTGCCTCGGGACTCCTaGAAGCCGGCTGCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: SSRASARAGEVTWWWSPLVPRDS*KPAASE
Trigger: CTCCGAGGCAGCCGGCTTCCAGGAGTCCCGAGGCAC...CAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp GTAAACGCACACGTGTCTCGCACGCATGGCGCAGAGGTCACCCAGACTCATCCCAGGAGGAAGGTGAGCTaGCCTGCGGTGAGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: VNAHVSRTHGAEVTQTHPRRKVS*PAVSAA
Trigger: GGCCGCGCTCACCGCAGGCCAGCTCACCTTCCTCCT...GGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCGAGACACGTGTGCGTTTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp TCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCCTTGGGAATGCAGCGGCCATaGCCTCCTCCCAGCACGGGG +
Preference number: 4 (lower is better)
Translates to: SSRASARAGEVTWWWSPLGMQRP*PPPSTG
Trigger: CCCCGTGCTGGGAGGAGGCCATGGCCGCTGCATTCC...CAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp CGCACGCATGGCGCAGAGGTCACCCAGACTCATCCCGTGCCTCTGCACGAGCAGTGCCTCCAGGGCAGTTaGCCGGTCCTGGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: RTHGAEVTQTHPVPLHEQCLQGS*PVLESR
Trigger: TCTGCTTTCCAGGACCGGCCAACTGCCCTGGAGGCA...CTGCTCGTGCAGAGGCACGGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS-3UTR CCA 90 bp ATGGCGCAGAGGTCACCCAGACTCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGCAGGGTGGCCGGTGTaGAGCGGGTTCACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: MAQRSPRLIPCLCTSRGSAGWPV*SGFTAP
Trigger: AGGAGCTGTGAACCCGCTCCACACCGGCCACCCTGC...ACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCTGGGTGACCTCTGCGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS-3UTR TCA 90 bp CGCACGCATGGCGCAGAGGTCACCCAGACTCATCCCGTGCCTCTGCACGAGCAGTTCCAGCTTCCACCCTaGAGTGCGTGTGGTCGTGGA +
Preference number: 4 (lower is better)
Translates to: RTHGAEVTQTHPVPLHEQFQLPP*SACGRG
Trigger: TCCACGACCACACGCACTTCAGGGTGGAAGCTGGAA...CTGCTCGTGCAGAGGCACGGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp AGTAAACGCACACGTGTCTCGCACGCATGGCGCAGAGGTCACCCAGACTCATCCTCCACAGCCCCACGCTaGGCCTGCGCCCATCCTCCA +
Preference number: 4 (lower is better)
Translates to: SKRTRVSHAWRRGHPDSSSTAPR*ACAHPP
Trigger: TGGAGGATGGGCGCAGGCGCAGCGTGGGGCTGTGGA...GGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCGAGACACGTGTGCGTTTACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp CACACGTGTCTCGCACGCATGGCGCAGAGGTCACCCAGACTCATCCCGTGCCTCAAGTGCGTGTGGTCGTaGAGCCGCGTTGCGCTAACC +
Preference number: 4 (lower is better)
Translates to: HTCLARMAQRSPRLIPCLKCVWS*SRVALT
Trigger: GGTTAGCGCAACGCGGCTCCACGACCACACGCACTT...GAGGCACGGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCGAGACACGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp GAAGTGCGTGTGGTCGTGGAGCCGCGTTGCGCTAACCAGGAAAGCTGGAGGCAGACCCTGAAGTGCGTGTaGTCGTGGAGCCGCGTTGCG +
Preference number: 4 (lower is better)
Translates to: EVRVVVEPRCANQESWRQTLKCV*SWSRVA
Trigger: CGCAACGCGGCTCCACGACCACACGCACTTCAGGGT...CTGCCTCCAGCTTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR TCA 90 bp GCACACGTGTCTCGCACGCATGGCGCAGAGGTCACCCAGACTCATCCCGTGCCTATAGCAGGTGTGCGTTaGTGGAGCGCTGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: AHVSRTHGAEVTQTHPVPIAGVR*WSAEKG
Trigger: GCCCTTCTCAGCGCTCCATCAACGCACACCTGCTAT...AGGCACGGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCGAGACACGTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp GCTTCCACCCTGAAGTGCGTGTGGTCGTGGAGCCGCGTTGCGCTAACCAGGAAACGCCTCACAGTCATGTaGGTCCACCTGGCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: ASTLKCVWSWSRVALTRKRLTVM*VHLAGS
Trigger: AGAGCCGGCCAGGTGGACGCACATGACTGTGAGGCG...TTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTCAGGGTGGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp CCAGACTCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCGTGGCCACCAGGTTaGAGGCGCGCATCATGTCGA +
Preference number: 4 (lower is better)
Translates to: PDSSRASARAGEVTWWWSPWPPG*RRASCR
Trigger: TCGACATGATGCGCGCCTGCAACCTGGTGGCCACGG...ACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp AGACTCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCCCGTGGCCACCAGGTTaGAGGCGCGCATCATGTCGA +
Preference number: 4 (lower is better)
Translates to: RLIPCLCTSRGSDLVVESPWPPG*RRASCR
Trigger: TCGACATGATGCGCGCCTGCAACCTGGTGGCCACGG...GGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp GCTTCCACCCTGAAGTGCGTGTGGTCGTGGAGCCGCGTTGCGCTAACCAGGAAACCAGATGAGCATGGCTaGCGCCAGCGTGGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: ASTLKCVWSWSRVALTRKPDEHG*RQRGQK
Trigger: CTTCTGGCCACGCTGGCGGCAGCCATGCTCATCTGG...TTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTCAGGGTGGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp AGGTCACCCAGACTCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGCCCAGACTCATCCCGTaGCTCTGCACGAGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: RSPRLIPCLCTSRGSDLVPRLIP*LCTSRG
Trigger: TCCCCTGCTCGTGCAGAGGCACGGGATGAGTCTGGG...CACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCTGGGTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp AGACTCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCCCCAGACTCATCCCGTaGCTCTGCACGAGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: RLIPCLCTSRGSDLVVESPRLIP*LCTSRG
Trigger: TCCCCTGCTCGTGCAGAGGCACGGGATGAGTCTGGG...GGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp TCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCCTTGGCTTCCACCCTGAAGTaGGTGTGGTCGTGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: SSRASARAGEVTWWWSPLASTLK*VWSWSR
Trigger: GCGGCTCCACGACCACACGCACTTCAGGGTGGAAGC...CAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp CGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCCTTGGTTTCTCCTCCTTCCTGCACCTaGAGCAGGGCCAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: RASARAGEVTWWWSPLVSPPSCT*SRARPV
Trigger: CACAGGCCTGGCCCTGCTCCAGGTGCAGGAAGGAGG...AGAAACCAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp CGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCCTTGGTTTCTAGGCTGTTCCACGTGCCTCGGGACTCCTaGAAGCCGGCTGCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: RAGEVTWWWSPLVSRLFHVPRDS*KPAASE
Trigger: CTCCGAGGCAGCCGGCTTCCAGGAGTCCCGAGGCAC...GTGGAACAGCCTAGAAACCAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR TCA 90 bp GTAAACGCACACGTGTCTCGCACGCATGGCGCAGAGGTCACCCAGACTCATCCCGGAGAATGTTCCAGATaGGCATGGCTGCCGCCAGCG +
Preference number: 4 (lower is better)
Translates to: VNAHVSRTHGAEVTQTHPGECSR*AWLPPA
Trigger: CGCTGGCGGCAGCCATGCTCATCTGGAACATTCTCC...GGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCGAGACACGTGTGCGTTTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp TGGAGGCAGAACGAGGTTGGCCCACGACACGTACAGACATATGACCGACATAACGCCCCACGCTGCGCCTaGGCCCATCCTCCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: WRQNEVGPRHVQTYDRHNAPRCA*AHPPAS
Trigger: AGACGCTGGAGGATGGGCGCAGGCGCAGCGTGGGGC...GTTATGTCGGTCATATGTCTGTACGTGTCGTGGGCCAACCTCGTTCTGCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp TCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCCTTGACTCGCCAGTTGGAATaGAGCGGCCATGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SSRASARAGEVTWWWSPLTRQLE*SGHGLL
Trigger: GAGGAGGCCATGGCCGCTGCATTCCAACTGGCGAGT...CAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp GCTTCCACCCTGAAGTGCGTGTGGTCGTGGAGCCGCGTTGCGCTAACCAGGAAACTCATCCCGTGCCTCTaGACGAGCAGGGGAAGTGAC +
Preference number: 4 (lower is better)
Translates to: ASTLKCVWSWSRVALTRKLIPCL*TSRGSD
Trigger: GTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAG...TTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTCAGGGTGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp GGGGAAGTGACTTGGTGGTGGAGTCCCTTGGTTTCTAGGCTGTTCCACGATAGCGGCCTGTGCCGCGCGTaGCTCTTCTCGCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: GEVTWWWSPLVSRLFHDSGLCRA*LFSPAA
Trigger: TGCTGCAGGCGAGAAGAGGCACGCGCGGCACAGGCC...GCTATCGTGGAACAGCCTAGAAACCAAGGGACTCCACCACCAAGTCACTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS-3UTR CCA 90 bp GGGGAAGTGACTTGGTGGTGGAGTCCCTTGGTTTCTAGGCTGTTCCACGATAGCGGAATGCAGCGGCCATaGCCTCCTCCCAGCACGGGG +
Preference number: 4 (lower is better)
Translates to: GEVTWWWSPLVSRLFHDSGMQRP*PPPSTG
Trigger: CCCCGTGCTGGGAGGAGGCCATGGCCGCTGCATTCC...GCTATCGTGGAACAGCCTAGAAACCAAGGGACTCCACCACCAAGTCACTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp CGCACGCATGGCGCAGAGGTCACCCAGACTCATCCCGTGCCTCTGCACGAGCAGAGTGTAAGATATGGCTaGGGTGCCCCTCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: RTHGAEVTQTHPVPLHEQSVRYG*GAPLSR
Trigger: TCTGCTGAGAGGGGCACCCCAGCCATATCTTACACT...CTGCTCGTGCAGAGGCACGGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR TCA 90 bp GTACAGACATATGACCGACATAACAGTAAACGCACACGTGTCTCGCACGCATGGCCTCAGAGCGGCCTGTaGCCGTGCCAGCGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: VQTYDRHNSKRTRVSHAWPQSGL*PCQRGG
Trigger: GCCTCCCCGCTGGCACGGTCACAGGCCGCTCTGAGG...CCATGCGTGCGAGACACGTGTGCGTTTACTGTTATGTCGGTCATATGTCTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253934.9
CDS-3UTR TCA 90 bp GCTTCCACCCTGAAGTGCGTGTGGTCGTGGAGCCGCGTTGCGCTAACCAGGAAAATAGCAGGTGTGCGTTaGTGGAGCGCTGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: ASTLKCVWSWSRVALTRKIAGVR*WSAEKG
Trigger: GCCCTTCTCAGCGCTCCATCAACGCACACCTGCTAT...TTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTCAGGGTGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp CACGACACGTACAGACATATGACCGACATAACAGTAAACGCACACGTGTCTCGCGCGGAGGCCGGCCTGTaGCGCGCGTGCCTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: HDTYRHMTDITVNAHVSRAEAGL*RACLFS
Trigger: CGAGAAGAGGCACGCGCGGCACAGGCCGGCCTCCGC...GCGAGACACGTGTGCGTTTACTGTTATGTCGGTCATATGTCTGTACGTGTCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp TGGAGGCAGAACGAGGTTGGCCCACGACACGTACAGACATATGACCGACATAACTCCACAGCCCCACGCTaGGCCTGCGCCCATCCTCCA +
Preference number: 4 (lower is better)
Translates to: WRQNEVGPRHVQTYDRHNSTAPR*ACAHPP
Trigger: TGGAGGATGGGCGCAGGCGCAGCGTGGGGCTGTGGA...GTTATGTCGGTCATATGTCTGTACGTGTCGTGGGCCAACCTCGTTCTGCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp CGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCCTTGGTTTCTACAGCTCCTCTGTGCTaGCTGGGCCCCTGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: RASARAGEVTWWWSPLVSTAPLC*LGPCVD
Trigger: ATCCACACAGGGGCCCAGGCAGCACAGAGGAGCTGT...AGAAACCAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS-3UTR GCA 90 bp GGCAGAACGAGGTTGGCCCACGACACGTACAGACATATGACCGACATAACAGTACCGGCCTGCTGTGAGTaGCAGGCTCCGGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GRTRLAHDTYRHMTDITVPACCE*QAPGRV
Trigger: CACCCTGCCCGGAGCCTGGCACTCACAGCAGGCCGG...TACTGTTATGTCGGTCATATGTCTGTACGTGTCGTGGGCCAACCTCGTTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS-3UTR CCA 90 bp GGGGAAGTGACTTGGTGGTGGAGTCCCTTGGTTTCTAGGCTGTTCCACGATAGCGGCTCTGTGGGCGGCTaGTCCCTCCAGTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GEVTWWWSPLVSRLFHDSGSVGG*SLQSSE
Trigger: CTCTGAGGACTGGAGGGACCAGCCGCCCACAGAGCC...GCTATCGTGGAACAGCCTAGAAACCAAGGGACTCCACCACCAAGTCACTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253934.9
CDS-3UTR CCA 90 bp CGCACGCATGGCGCAGAGGTCACCCAGACTCATCCCGTGCCTCTGCACGAGCAGAGGACCAGGACAGGTTaGTGTATGGGCCAATTCTGT +
Preference number: 4 (lower is better)
Translates to: RTHGAEVTQTHPVPLHEQRTRTG*CMGQFC
Trigger: ACAGAATTGGCCCATACACCAACCTGTCCTGGTCCT...CTGCTCGTGCAGAGGCACGGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp ATGGCGCAGAGGTCACCCAGACTCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGGTGGTGGAGTCCCTTaGTTTCTAGGCTGTTCCACG +
Preference number: 4 (lower is better)
Translates to: MAQRSPRLIPCLCTSRGSGGGVP*FLGCST
Trigger: CGTGGAACAGCCTAGAAACCAAGGGACTCCACCACC...ACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCTGGGTGACCTCTGCGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp TCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCCTTGGAGGCAGAACGAGGTTaGCCCACGACACGTACAGAC +
Preference number: 4 (lower is better)
Translates to: SSRASARAGEVTWWWSPLEAERG*PTTRTD
Trigger: GTCTGTACGTGTCGTGGGCCAACCTCGTTCTGCCTC...CAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp TTCCACCCTGAAGTGCGTGTGGTCGTGGAGCCGCGTTGCGCTAACCAGGAAAGCGGTGGTGGAGTCCCTTaGTTTCTAGGCTGTTCCACG +
Preference number: 4 (lower is better)
Translates to: FHPEVRVVVEPRCANQESGGGVP*FLGCST
Trigger: CGTGGAACAGCCTAGAAACCAAGGGACTCCACCACC...GCTTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTCAGGGTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR TCA 90 bp AATCGAGCAAAACAGACACGAACACGATTCTGTCTGAAACCATCACTAACCGGCGGGCCAGGCCTGTGCTaGAGCTGCTCGCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: NRAKQTRTRFCLKPSLTGGPGLC*SCSPRG
Trigger: GCCCCGAGGCGAGCAGCTTCAGCACAGGCCTGGCCC...GCCGGTTAGTGATGGTTTCAGACAGAATCGTGTTCGTGTCTGTTTTGCTCGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp CACGACACGTACAGACATATGACCGACATAACAGTAAACGCACACGTGTCTCGCGGGCCCCTGTGTGGATaGCTCCAGGGCAGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: HDTYRHMTDITVNAHVSRGPLCG*LQGSWP
Trigger: CGGCCAACTGCCCTGGAGGCATCCACACAGGGGCCC...GCGAGACACGTGTGCGTTTACTGTTATGTCGGTCATATGTCTGTACGTGTCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS-3UTR CCA 90 bp GAAAGCTGGAGGCAGAACGAGGTTGGCCCACGACACGTACAGACATATGACCGACCATCCTCCAGCGTCTaGCACACCCAGTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ESWRQNEVGPRHVQTYDRPSSSV*HTQLEV
Trigger: CACCTCCAACTGGGTGTGCCAGACGCTGGAGGATGG...TCGGTCATATGTCTGTACGTGTCGTGGGCCAACCTCGTTCTGCCTCCAGCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp CACGACACGTACAGACATATGACCGACATAACAGTAAACGCACACGTGTCTCGCAGGAGGAAGGTGAGCTaGCCTGCGGTGAGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: HDTYRHMTDITVNAHVSRRRKVS*PAVSAA
Trigger: GGCCGCGCTCACCGCAGGCCAGCTCACCTTCCTCCT...GCGAGACACGTGTGCGTTTACTGTTATGTCGGTCATATGTCTGTACGTGTCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp GTACAGACATATGACCGACATAACAGTAAACGCACACGTGTCTCGCACGCATGGTGGCTGCCGCCAGCGTaGCCAGAAGGCAGGCGCCAA +
Preference number: 4 (lower is better)
Translates to: VQTYDRHNSKRTRVSHAWWLPPA*PEGRRQ
Trigger: TTGGCGCCTGCCTTCTGGCCACGCTGGCGGCAGCCA...CCATGCGTGCGAGACACGTGTGCGTTTACTGTTATGTCGGTCATATGTCTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp AGGTCACCCAGACTCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGGGGAAGTGACTTGGTaGTGGAGTCCCTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: RSPRLIPCLCTSRGSDLVGEVTW*WSPLVS
Trigger: AGAAACCAAGGGACTCCACCACCAAGTCACTTCCCC...CACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCTGGGTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp CGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCCTTGGTTTCTGCAGGGGAAGTGACTTaGTGGTGGAGTCCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: RASARAGEVTWWWSPLVSAGEVT*WWSPLV
Trigger: AACCAAGGGACTCCACCACCAAGTCACTTCCCCTGC...AGAAACCAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp TATGACCGACATAACAGTAAACGCACACGTGTCTCGCACGCATGGCGCAGAGGTCGTGTCTCGCACGCATaGCGCAGAGGTCACCCAGAC +
Preference number: 4 (lower is better)
Translates to: YDRHNSKRTRVSHAWRRGRVSHA*RRGHPD
Trigger: GTCTGGGTGACCTCTGCGCCATGCGTGCGAGACACG...ACCTCTGCGCCATGCGTGCGAGACACGTGTGCGTTTACTGTTATGTCGGTCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp GCTTCCACCCTGAAGTGCGTGTGGTCGTGGAGCCGCGTTGCGCTAACCAGGAAACCAAAGTGTAAGATATaGCTGGGGTGCCCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: ASTLKCVWSWSRVALTRKPKCKI*LGCPSQ
Trigger: CTGAGAGGGGCACCCCAGCCATATCTTACACTTTGG...TTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTCAGGGTGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp TTCCACCCTGAAGTGCGTGTGGTCGTGGAGCCGCGTTGCGCTAACCAGGAAAGCCCAAAGTGTAAGATATaGCTGGGGTGCCCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: FHPEVRVVVEPRCANQESPKCKI*LGCPSQ
Trigger: CTGAGAGGGGCACCCCAGCCATATCTTACACTTTGG...GCTTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTCAGGGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
3UTR CAA 72 bp GCACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCCTaGGTTTCTAGGCTGTTCCACGATAGCAGGTGTGCG +
Preference number: 4 (lower is better)
Translates to: ARAGEVTWWWSP*VSRLFHDSRCA
Trigger: CGCACACCTGCTATCGTGGAACAGCCTAGAAACCAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR TCA 90 bp GAAAGCTGGAGGCAGAACGAGGTTGGCCCACGACACGTACAGACATATGACCGATGTCGAACTGCAGTTTaGCGGTGCCTCGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: ESWRQNEVGPRHVQTYDRCRTAV*RCLGTP
Trigger: AGGAGTCCCGAGGCACCGTCAAACTGCAGTTCGACA...TCGGTCATATGTCTGTACGTGTCGTGGGCCAACCTCGTTCTGCCTCCAGCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp GGCAGAACGAGGTTGGCCCACGACACGTACAGACATATGACCGACATAACAGTACGCCTCACAGTCATGTaGGTCCACCTGGCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: GRTRLAHDTYRHMTDITVRLTVM*VHLAGS
Trigger: AGAGCCGGCCAGGTGGACGCACATGACTGTGAGGCG...TACTGTTATGTCGGTCATATGTCTGTACGTGTCGTGGGCCAACCTCGTTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp GGCAGAACGAGGTTGGCCCACGACACGTACAGACATATGACCGACATAACAGTACCAGATGAGCATGGCTaGCGCCAGCGTGGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GRTRLAHDTYRHMTDITVPDEHG*RQRGQK
Trigger: CTTCTGGCCACGCTGGCGGCAGCCATGCTCATCTGG...TACTGTTATGTCGGTCATATGTCTGTACGTGTCGTGGGCCAACCTCGTTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp CACGACACGTACAGACATATGACCGACATAACAGTAAACGCACACGTGTCTCGCAAGCAGAGTGGCTGCTaGAGGGACGCCCGTGTGCGC +
Preference number: 4 (lower is better)
Translates to: HDTYRHMTDITVNAHVSRKQSGC*RDARVR
Trigger: GCGCACACGGGCGTCCCTGCAGCAGCCACTCTGCTT...GCGAGACACGTGTGCGTTTACTGTTATGTCGGTCATATGTCTGTACGTGTCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS-3UTR CCA 90 bp GAATCGAGCAAAACAGACACGAACACGATTCTGTCTGAAACCATCACTAACCGGGGGCTCGGGGCTCTGTaGGCGGCTGGTCCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: ESSKTDTNTILSETITNRGLGAL*AAGPSS
Trigger: ACTGGAGGGACCAGCCGCCCACAGAGCCCCGAGCCC...CCGGTTAGTGATGGTTTCAGACAGAATCGTGTTCGTGTCTGTTTTGCTCGATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253934.9
CDS-3UTR CCA 90 bp CACGACACGTACAGACATATGACCGACATAACAGTAAACGCACACGTGTCTCGCCGGAGGCCCATGGGATaGTCCAGGTGTGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: HDTYRHMTDITVNAHVSRRRPMG*SRCAAS
Trigger: AGAGGCGGCACACCTGGACCATCCCATGGGCCTCCG...GCGAGACACGTGTGCGTTTACTGTTATGTCGGTCATATGTCTGTACGTGTCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp AGACTCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCCAGTCCTCCCTCTTGTaGAGAATGTTCCAGATGAGC +
Preference number: 4 (lower is better)
Translates to: RLIPCLCTSRGSDLVVESQSSLL*RMFQMS
Trigger: GCTCATCTGGAACATTCTCCACAAGAGGGAGGACTG...GGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp AGTAAACGCACACGTGTCTCGCACGCATGGCGCAGAGGTCACCCAGACTCATCCAGTGTAAGATATGGCTaGGGTGCCCCTCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SKRTRVSHAWRRGHPDSSSVRYG*GAPLSR
Trigger: TCTGCTGAGAGGGGCACCCCAGCCATATCTTACACT...GGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCGAGACACGTGTGCGTTTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR TCA 90 bp GGAAAAGAATCGAGCAAAACAGACACGAACACGATTCTGTCTGAAACCATCACTGGGCCAGGCCTGTGCTaGAGCTGCTCGCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: GKESSKTDTNTILSETITGPGLC*SCSPRG
Trigger: GCCCCGAGGCGAGCAGCTTCAGCACAGGCCTGGCCC...AGTGATGGTTTCAGACAGAATCGTGTTCGTGTCTGTTTTGCTCGATTCTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR TCA 90 bp AGTCCCTTGGTTTCTAGGCTGTTCCACGATAGCAGGTGTGCGTTGATGGAGCGCGGCGACTCAGCATGGTaGCTCCACGTAGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: SPLVSRLFHDSRCALMERGDSAW*LHVVIV
Trigger: GACAATGACTACGTGGAGTCACCATGCTGAGTCGCC...GCGCTCCATCAACGCACACCTGCTATCGTGGAACAGCCTAGAAACCAAGGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp GGCAGAACGAGGTTGGCCCACGACACGTACAGACATATGACCGACATAACAGTACCTTATCCTCCTTCCTaGACCTGGAGCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GRTRLAHDTYRHMTDITVPYPPS*TWSRAR
Trigger: CCTGGCCCTGCTCCAGGTGCAGGAAGGAGGATAAGG...TACTGTTATGTCGGTCATATGTCTGTACGTGTCGTGGGCCAACCTCGTTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp GAATCGAGCAAAACAGACACGAACACGATTCTGTCTGAAACCATCACTAACCGGTCATGTGCGTCCACCTaGCCGGCTCTGGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: ESSKTDTNTILSETITNRSCAST*PALAPG
Trigger: CCCTGGGGCCAGAGCCGGCCAGGTGGACGCACATGA...CCGGTTAGTGATGGTTTCAGACAGAATCGTGTTCGTGTCTGTTTTGCTCGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp GAATCGAGCAAAACAGACACGAACACGATTCTGTCTGAAACCATCACTAACCGGTGGCTGCCGCCAGCGTaGCCAGAAGGCAGGCGCCAA +
Preference number: 4 (lower is better)
Translates to: ESSKTDTNTILSETITNRWLPPA*PEGRRQ
Trigger: TTGGCGCCTGCCTTCTGGCCACGCTGGCGGCAGCCA...CCGGTTAGTGATGGTTTCAGACAGAATCGTGTTCGTGTCTGTTTTGCTCGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp GGGGAAGTGACTTGGTGGTGGAGTCCCTTGGTTTCTAGGCTGTTCCACGATAGCGCAGGGGAAGTGACTTaGTGGTGGAGTCCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: GEVTWWWSPLVSRLFHDSAGEVT*WWSPLV
Trigger: AACCAAGGGACTCCACCACCAAGTCACTTCCCCTGC...GCTATCGTGGAACAGCCTAGAAACCAAGGGACTCCACCACCAAGTCACTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp GGCAGAACGAGGTTGGCCCACGACACGTACAGACATATGACCGACATAACAGTAAAGTGCGTGTGGTCGTaGAGCCGCGTTGCGCTAACC +
Preference number: 4 (lower is better)
Translates to: GRTRLAHDTYRHMTDITVKCVWS*SRVALT
Trigger: GGTTAGCGCAACGCGGCTCCACGACCACACGCACTT...TACTGTTATGTCGGTCATATGTCTGTACGTGTCGTGGGCCAACCTCGTTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp GGCAGAACGAGGTTGGCCCACGACACGTACAGACATATGACCGACATAACAGTAGCAGTTGGCCGGTCCTaGAAAGCAGAGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GRTRLAHDTYRHMTDITVAVGRS*KAEWLL
Trigger: CAGCAGCCACTCTGCTTTCCAGGACCGGCCAACTGC...TACTGTTATGTCGGTCATATGTCTGTACGTGTCGTGGGCCAACCTCGTTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS-3UTR TCA 90 bp TATGACCGACATAACAGTAAACGCACACGTGTCTCGCACGCATGGCGCAGAGGTAAGTCACGAGCCCGATaGCCAGGACAAAACTCGCCA +
Preference number: 4 (lower is better)
Translates to: YDRHNSKRTRVSHAWRRGKSRAR*PGQNSP
Trigger: TGGCGAGTTTTGTCCTGGTCATCGGGCTCGTGACTT...ACCTCTGCGCCATGCGTGCGAGACACGTGTGCGTTTACTGTTATGTCGGTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR TCA 90 bp CACGACACGTACAGACATATGACCGACATAACAGTAAACGCACACGTGTCTCGCGGAGAATGTTCCAGATaGGCATGGCTGCCGCCAGCG +
Preference number: 4 (lower is better)
Translates to: HDTYRHMTDITVNAHVSRGECSR*AWLPPA
Trigger: CGCTGGCGGCAGCCATGCTCATCTGGAACATTCTCC...GCGAGACACGTGTGCGTTTACTGTTATGTCGGTCATATGTCTGTACGTGTCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR TCA 90 bp TGCCCCTCTCAGCAGATGCAGAATAAATTAATCCCAAAGCAAAGCGGAGCGCAGGCGTTGATGGAGCGCTaGGAAGGGCGACTCAGCATG +
Preference number: 4 (lower is better)
Translates to: CPSQQMQNKLIPKQSGAQALMER*EGRLSM
Trigger: CATGCTGAGTCGCCCTTCTCAGCGCTCCATCAACGC...CTGCGCTCCGCTTTGCTTTGGGATTAATTTATTCTGCATCTGCTGAGAGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR TCA 90 bp GTACAGACATATGACCGACATAACAGTAAACGCACACGTGTCTCGCACGCATGGCACGAGCAGGGGAAGTaGCTTGGTGGTGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: VQTYDRHNSKRTRVSHAWHEQGK*LGGGVP
Trigger: AGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTG...CCATGCGTGCGAGACACGTGTGCGTTTACTGTTATGTCGGTCATATGTCTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp GTACAGACATATGACCGACATAACAGTAAACGCACACGTGTCTCGCACGCATGGCCTTATCCTCCTTCCTaGACCTGGAGCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VQTYDRHNSKRTRVSHAWPYPPS*TWSRAR
Trigger: CCTGGCCCTGCTCCAGGTGCAGGAAGGAGGATAAGG...CCATGCGTGCGAGACACGTGTGCGTTTACTGTTATGTCGGTCATATGTCTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp TGCCCCTCTCAGCAGATGCAGAATAAATTAATCCCAAAGCAAAGCGGAGCGCAGACTCGCCAGTTGGAATaGAGCGGCCATGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: CPSQQMQNKLIPKQSGAQTRQLE*SGHGLL
Trigger: GAGGAGGCCATGGCCGCTGCATTCCAACTGGCGAGT...CTGCGCTCCGCTTTGCTTTGGGATTAATTTATTCTGCATCTGCTGAGAGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp TGGAGGCAGAACGAGGTTGGCCCACGACACGTACAGACATATGACCGACATAACAAGATATGGCTGGGGTaGCCCTCTCAGCAGATGCAG +
Preference number: 4 (lower is better)
Translates to: WRQNEVGPRHVQTYDRHNKIWLG*PSQQMQ
Trigger: CTGCATCTGCTGAGAGGGGCACCCCAGCCATATCTT...GTTATGTCGGTCATATGTCTGTACGTGTCGTGGGCCAACCTCGTTCTGCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp GCTTCCACCCTGAAGTGCGTGTGGTCGTGGAGCCGCGTTGCGCTAACCAGGAAAGGACAGGTTGGTGTATaGGCCAATTCTGTAGAAAGT +
Preference number: 4 (lower is better)
Translates to: ASTLKCVWSWSRVALTRKGQVGV*ANSVES
Trigger: ACTTTCTACAGAATTGGCCCATACACCAACCTGTCC...TTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTCAGGGTGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp AGACTCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCGGACAGGTTGGTGTATaGGCCAATTCTGTAGAAAGT +
Preference number: 4 (lower is better)
Translates to: RLIPCLCTSRGSDLVVESGQVGV*ANSVES
Trigger: ACTTTCTACAGAATTGGCCCATACACCAACCTGTCC...GGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp AGTCCCTTGGTTTCTAGGCTGTTCCACGATAGCAGGTGTGCGTTGATGGAGCGCGGGGAAGTGACTTGGTaGTGGAGTCCCTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SPLVSRLFHDSRCALMERGEVTW*WSPLVS
Trigger: AGAAACCAAGGGACTCCACCACCAAGTCACTTCCCC...GCGCTCCATCAACGCACACCTGCTATCGTGGAACAGCCTAGAAACCAAGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR TCA 90 bp TTTCTGCTTTACCAAAGTGTAAGATATGGCTGGGGTGCCCCTCTCAGCAGATGCGTTGTTGAGGATGAGTaGGACCAGGGCCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: FLLYQSVRYGWGAPLSRCVVEDE*DQGHQH
Trigger: GTGCTGGTGGCCCTGGTCTCACTCATCCTCAACAAC...GCATCTGCTGAGAGGGGCACCCCAGCCATATCTTACACTTTGGTAAAGCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR TCA 90 bp GCTTCCACCCTGAAGTGCGTGTGGTCGTGGAGCCGCGTTGCGCTAACCAGGAAAACCGGCTATAGATTCTaGCTCACTCAAGGAATATTG +
Preference number: 4 (lower is better)
Translates to: ASTLKCVWSWSRVALTRKTGYRF*LTQGIL
Trigger: CAATATTCCTTGAGTGAGTCAGAATCTATAGCCGGT...TTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTCAGGGTGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp AATCGAGCAAAACAGACACGAACACGATTCTGTCTGAAACCATCACTAACCGGCGGAAAGCAGAGTGGCTaGTGCAGGGACGCCCGTGTG +
Preference number: 4 (lower is better)
Translates to: NRAKQTRTRFCLKPSLTGGKQSG*CRDARV
Trigger: CACACGGGCGTCCCTGCAGCAGCCACTCTGCTTTCC...GCCGGTTAGTGATGGTTTCAGACAGAATCGTGTTCGTGTCTGTTTTGCTCGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS-3UTR CCA 90 bp GGGGAAGTGACTTGGTGGTGGAGTCCCTTGGTTTCTAGGCTGTTCCACGATAGCCAGTCCTCCCTCTTGTaGAGAATGTTCCAGATGAGC +
Preference number: 4 (lower is better)
Translates to: GEVTWWWSPLVSRLFHDSQSSLL*RMFQMS
Trigger: GCTCATCTGGAACATTCTCCACAAGAGGGAGGACTG...GCTATCGTGGAACAGCCTAGAAACCAAGGGACTCCACCACCAAGTCACTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp GAAAGCTGGAGGCAGAACGAGGTTGGCCCACGACACGTACAGACATATGACCGAGAAGTGACTTGGTGGTaGAGTCCCTTGGTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: ESWRQNEVGPRHVQTYDREVTWW*SPLVSR
Trigger: CCTAGAAACCAAGGGACTCCACCACCAAGTCACTTC...TCGGTCATATGTCTGTACGTGTCGTGGGCCAACCTCGTTCTGCCTCCAGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp AATCGAGCAAAACAGACACGAACACGATTCTGTCTGAAACCATCACTAACCGGCCGTGTCTCGCACGCATaGCGCAGAGGTCACCCAGAC +
Preference number: 4 (lower is better)
Translates to: NRAKQTRTRFCLKPSLTGRVSHA*RRGHPD
Trigger: GTCTGGGTGACCTCTGCGCCATGCGTGCGAGACACG...GCCGGTTAGTGATGGTTTCAGACAGAATCGTGTTCGTGTCTGTTTTGCTCGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp TGCCCCTCTCAGCAGATGCAGAATAAATTAATCCCAAAGCAAAGCGGAGCGCAGGAGGCAGAACGAGGTTaGCCCACGACACGTACAGAC +
Preference number: 4 (lower is better)
Translates to: CPSQQMQNKLIPKQSGAQEAERG*PTTRTD
Trigger: GTCTGTACGTGTCGTGGGCCAACCTCGTTCTGCCTC...CTGCGCTCCGCTTTGCTTTGGGATTAATTTATTCTGCATCTGCTGAGAGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR TCA 90 bp CACGACACGTACAGACATATGACCGACATAACAGTAAACGCACACGTGTCTCGCAAGTCACGAGCCCGATaGCCAGGACAAAACTCGCCA +
Preference number: 4 (lower is better)
Translates to: HDTYRHMTDITVNAHVSRKSRAR*PGQNSP
Trigger: TGGCGAGTTTTGTCCTGGTCATCGGGCTCGTGACTT...GCGAGACACGTGTGCGTTTACTGTTATGTCGGTCATATGTCTGTACGTGTCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR TCA 90 bp GTACAGACATATGACCGACATAACAGTAAACGCACACGTGTCTCGCACGCATGGGGCGACTCAGCATGGTaGCTCCACGTAGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: VQTYDRHNSKRTRVSHAWGDSAW*LHVVIV
Trigger: GACAATGACTACGTGGAGTCACCATGCTGAGTCGCC...CCATGCGTGCGAGACACGTGTGCGTTTACTGTTATGTCGGTCATATGTCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp AAAGAATCGAGCAAAACAGACACGAACACGATTCTGTCTGAAACCATCACTAACACCCAGGGCCAGGAGTaGGCCGTCTTCCCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: KESSKTDTNTILSETITNTQGQE*AVFPGS
Trigger: GCTTCCCGGGAAGACGGCGCACTCCTGGCCCTGGGT...GTTAGTGATGGTTTCAGACAGAATCGTGTTCGTGTCTGTTTTGCTCGATTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp GAATCGAGCAAAACAGACACGAACACGATTCTGTCTGAAACCATCACTAACCGGTTCACAGCTCCTCTGTaGTGCCTGGGCCCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: ESSKTDTNTILSETITNRFTAPL*CLGPCV
Trigger: CACACAGGGGCCCAGGCAGCACAGAGGAGCTGTGAA...CCGGTTAGTGATGGTTTCAGACAGAATCGTGTTCGTGTCTGTTTTGCTCGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS-3UTR GCA 90 bp GGCAGAACGAGGTTGGCCCACGACACGTACAGACATATGACCGACATAACAGTAGTGCCTCTTCTCGCCTaGAGCAGTGGAAAACAGAGT +
Preference number: 4 (lower is better)
Translates to: GRTRLAHDTYRHMTDITVVPLLA*SSGKQS
Trigger: ACTCTGTTTTCCACTGCTGCAGGCGAGAAGAGGCAC...TACTGTTATGTCGGTCATATGTCTGTACGTGTCGTGGGCCAACCTCGTTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS-3UTR CCA 90 bp GAATCGAGCAAAACAGACACGAACACGATTCTGTCTGAAACCATCACTAACCGGCCATCCTCCAGCGTCTaGCACACCCAGTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ESSKTDTNTILSETITNRPSSSV*HTQLEV
Trigger: CACCTCCAACTGGGTGTGCCAGACGCTGGAGGATGG...CCGGTTAGTGATGGTTTCAGACAGAATCGTGTTCGTGTCTGTTTTGCTCGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp TTTCTGCTTTACCAAAGTGTAAGATATGGCTGGGGTGCCCCTCTCAGCAGATGCAGAGCTCGCCTTCCCTaGCTCTCAGCAGAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: FLLYQSVRYGWGAPLSRCRARLP*LSAERK
Trigger: TTTCCTCTCTGCTGAGAGCCAGGGAAGGCGAGCTCT...GCATCTGCTGAGAGGGGCACCCCAGCCATATCTTACACTTTGGTAAAGCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS-3UTR GCA 90 bp GGAAAAGAATCGAGCAAAACAGACACGAACACGATTCTGTCTGAAACCATCACTCTCATCCCGTGCCTCTaGACGAGCAGGGGAAGTGAC +
Preference number: 4 (lower is better)
Translates to: GKESSKTDTNTILSETITLIPCL*TSRGSD
Trigger: GTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAG...AGTGATGGTTTCAGACAGAATCGTGTTCGTGTCTGTTTTGCTCGATTCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp AAAGAATCGAGCAAAACAGACACGAACACGATTCTGTCTGAAACCATCACTAACGCTTCCACCCTGAAGTaGGTGTGGTCGTGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: KESSKTDTNTILSETITNASTLK*VWSWSR
Trigger: GCGGCTCCACGACCACACGCACTTCAGGGTGGAAGC...GTTAGTGATGGTTTCAGACAGAATCGTGTTCGTGTCTGTTTTGCTCGATTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp GAATCGAGCAAAACAGACACGAACACGATTCTGTCTGAAACCATCACTAACCGGAAGATATGGCTGGGGTaGCCCTCTCAGCAGATGCAG +
Preference number: 4 (lower is better)
Translates to: ESSKTDTNTILSETITNRKIWLG*PSQQMQ
Trigger: CTGCATCTGCTGAGAGGGGCACCCCAGCCATATCTT...CCGGTTAGTGATGGTTTCAGACAGAATCGTGTTCGTGTCTGTTTTGCTCGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp AATCGAGCAAAACAGACACGAACACGATTCTGTCTGAAACCATCACTAACCGGCACAAAACTCGCCAGTTaGAATGCAGCGGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: NRAKQTRTRFCLKPSLTGTKLAS*NAAAMA
Trigger: GGCCATGGCCGCTGCATTCCAACTGGCGAGTTTTGT...GCCGGTTAGTGATGGTTTCAGACAGAATCGTGTTCGTGTCTGTTTTGCTCGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp TGCCCCTCTCAGCAGATGCAGAATAAATTAATCCCAAAGCAAAGCGGAGCGCAGAGGACCAGGACAGGTTaGTGTATGGGCCAATTCTGT +
Preference number: 4 (lower is better)
Translates to: CPSQQMQNKLIPKQSGAQRTRTG*CMGQFC
Trigger: ACAGAATTGGCCCATACACCAACCTGTCCTGGTCCT...CTGCGCTCCGCTTTGCTTTGGGATTAATTTATTCTGCATCTGCTGAGAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp AAAGAATCGAGCAAAACAGACACGAACACGATTCTGTCTGAAACCATCACTAACACCCTGAAGTGCGTGTaGTCGTGGAGCCGCGTTGCG +
Preference number: 4 (lower is better)
Translates to: KESSKTDTNTILSETITNTLKCV*SWSRVA
Trigger: CGCAACGCGGCTCCACGACCACACGCACTTCAGGGT...GTTAGTGATGGTTTCAGACAGAATCGTGTTCGTGTCTGTTTTGCTCGATTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR TCA 90 bp GGAAAAGAATCGAGCAAAACAGACACGAACACGATTCTGTCTGAAACCATCACTTGTCGAACTGCAGTTTaGCGGTGCCTCGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: GKESSKTDTNTILSETITCRTAV*RCLGTP
Trigger: AGGAGTCCCGAGGCACCGTCAAACTGCAGTTCGACA...AGTGATGGTTTCAGACAGAATCGTGTTCGTGTCTGTTTTGCTCGATTCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR TCA 90 bp AAAGAATCGAGCAAAACAGACACGAACACGATTCTGTCTGAAACCATCACTAACGCGTTGATGGAGCGCTaGGAAGGGCGACTCAGCATG +
Preference number: 4 (lower is better)
Translates to: KESSKTDTNTILSETITNALMER*EGRLSM
Trigger: CATGCTGAGTCGCCCTTCTCAGCGCTCCATCAACGC...GTTAGTGATGGTTTCAGACAGAATCGTGTTCGTGTCTGTTTTGCTCGATTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR TCA 90 bp GGAAAAGAATCGAGCAAAACAGACACGAACACGATTCTGTCTGAAACCATCACTTTCCAGCTTCCACCCTaGAGTGCGTGTGGTCGTGGA +
Preference number: 4 (lower is better)
Translates to: GKESSKTDTNTILSETITFQLPP*SACGRG
Trigger: TCCACGACCACACGCACTTCAGGGTGGAAGCTGGAA...AGTGATGGTTTCAGACAGAATCGTGTTCGTGTCTGTTTTGCTCGATTCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR TCA 90 bp TATGACCGACATAACAGTAAACGCACACGTGTCTCGCACGCATGGCGCAGAGGTACCGGCTATAGATTCTaGCTCACTCAAGGAATATTG +
Preference number: 4 (lower is better)
Translates to: YDRHNSKRTRVSHAWRRGTGYRF*LTQGIL
Trigger: CAATATTCCTTGAGTGAGTCAGAATCTATAGCCGGT...ACCTCTGCGCCATGCGTGCGAGACACGTGTGCGTTTACTGTTATGTCGGTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR GCA 90 bp AAAGAATCGAGCAAAACAGACACGAACACGATTCTGTCTGAAACCATCACTAACGTCGTGGAGCCGCGTTaGGCTAACCAGGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: KESSKTDTNTILSETITNVVEPR*ANQESW
Trigger: CCAGCTTTCCTGGTTAGCGCAACGCGGCTCCACGAC...GTTAGTGATGGTTTCAGACAGAATCGTGTTCGTGTCTGTTTTGCTCGATTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CCA 90 bp GGAAAAGAATCGAGCAAAACAGACACGAACACGATTCTGTCTGAAACCATCACTACAAAACTCGCCAGTTaGAATGCAGCGGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: GKESSKTDTNTILSETITTKLAS*NAAAMA
Trigger: GGCCATGGCCGCTGCATTCCAACTGGCGAGTTTTGT...AGTGATGGTTTCAGACAGAATCGTGTTCGTGTCTGTTTTGCTCGATTCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS CCA 90 bp CCCAGCCCAGCGCCTCACAGTCATGTGCGTCCACCTGGCCGGCTCTaGCCCCAGGGCTCGGCCCTCCCCGGGTCCTGTCCACCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: PSPAPHSHVRPPGRL*PQGSALPGSCPPAS
Trigger: GCTGGCTGGTGGACAGGACCCGGGGAGGGCCGAGCCCTGGGGCCAGAGCCGGCCAGGTGGACGCACATGACTGTGAGGCGCTGGGCTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS GCA 90 bp ATCCTCGGGGCGGCGCGGGCGGAGGCCCATGGGATGGTCCAGGTGTaGCGCCTCTCGGCCCGGCCTTATCCTCCTTCCTGCACCTGGAGC +
Preference number: 5 (lower is better)
Translates to: ILGAARAEAHGMVQV*RLSARPYPPSCTWS
Trigger: GCTCCAGGTGCAGGAAGGAGGATAAGGCCGGGCCGAGAGGCGGCACACCTGGACCATCCCATGGGCCTCCGCCCGCGCCGCCCCGAGGAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS TCA 90 bp GGGGCTCTGTGGGCGGCTGGTCCCTCCAGTCCTCAGAGCGGCCTGTaGCCGTGCCAGCGGGGAGGCTGCAGGGCTGCTGCCCTGCTAAGA +
Preference number: 5 (lower is better)
Translates to: GALWAAGPSSPQSGL*PCQRGGCRAAALLR
Trigger: TCTTAGCAGGGCAGCAGCCCTGCAGCCTCCCCGCTGGCACGGTCACAGGCCGCTCTGAGGACTGGAGGGACCAGCCGCCCACAGAGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253934.9
CDS GCA 90 bp GGAGTCGAGCCCGCGCCACACTCCTTAGCACCGGCCTGCTGTGAGTaGCAGGCTCCGGGCAGGGTGGCCGGTGTGGAGCGGGTTCACAGC +
Preference number: 5 (lower is better)
Translates to: GVEPAPHSLAPACCE*QAPGRVAGVERVHS
Trigger: GCTGTGAACCCGCTCCACACCGGCCACCCTGCCCGGAGCCTGGCACTCACAGCAGGCCGGTGCTAAGGAGTGTGGCGCGGGCTCGACTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS CCA 90 bp CAGGTGTGCCGCCTCTCGGCCCGGCCTTATCCTCCTTCCTGCACCTaGAGCAGGGCCAGGCCTGTGCTGAAGCTGCTCGCCTCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: QVCRLSARPYPPSCT*SRARPVLKLLASGP
Trigger: GGGCCCCGAGGCGAGCAGCTTCAGCACAGGCCTGGCCCTGCTCCAGGTGCAGGAAGGAGGATAAGGCCGGGCCGAGAGGCGGCACACCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS TCA 90 bp AGTGGGAGTCGAGCCCGCGCCACACTCCTTAGCACCGGCCTGCTGTaGGTGCCAGGCTCCGGGCAGGGTGGCCGGTGTGGAGCGGGTTCA +
Preference number: 5 (lower is better)
Translates to: SGSRARATLLSTGLL*VPGSGQGGRCGAGS
Trigger: TGAACCCGCTCCACACCGGCCACCCTGCCCGGAGCCTGGCACTCACAGCAGGCCGGTGCTAAGGAGTGTGGCGCGGGCTCGACTCCCACT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS GCA 90 bp CCGGGAAGCGGAGGCCGGCCTGTGCCGCGCGTGCCTCTTCTCGCCTaGAGCAGTGGAAAACAGAGTCACTCGGGAGGCCGGCAGCAGTGG +
Preference number: 5 (lower is better)
Translates to: PGSGGRPVPRVPLLA*SSGKQSHSGGRQQW
Trigger: CCACTGCTGCCGGCCTCCCGAGTGACTCTGTTTTCCACTGCTGCAGGCGAGAAGAGGCACGCGCGGCACAGGCCGGCCTCCGCTTCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS CCA 90 bp CATCACCACTCATCCTCGGGGCGGCGCGGGCGGAGGCCCATGGGATaGTCCAGGTGTGCCGCCTCTCGGCCCGGCCTTATCCTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: HHHSSSGRRGRRPMG*SRCAASRPGLILLP
Trigger: AGGAAGGAGGATAAGGCCGGGCCGAGAGGCGGCACACCTGGACCATCCCATGGGCCTCCGCCCGCGCCGCCCCGAGGATGAGTGGTGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS TCA 90 bp GGCCACCAGCACGGCCGCGGCCACGAGTCTCTGCACGGTCATCGCTaGCGCCGGTGCCGCCGCTTATCCGGAGAAAGCCAAGTCCCAGTC +
Preference number: 5 (lower is better)
Translates to: GHQHGRGHESLHGHR*RRCRRLSGESQVPV
Trigger: GACTGGGACTTGGCTTTCTCCGGATAAGCGGCGGCACCGGCGTCAGCGATGACCGTGCAGAGACTCGTGGCCGCGGCCGTGCTGGTGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS CCA 90 bp TGCCTGGGCCCCTGTGTGGATGCCTCCAGGGCAGTTGGCCGGTCCTaGAAAGCAGAGTGGCTGCTGCAGGGACGCCCGTGTGCGCAGAGC +
Preference number: 5 (lower is better)
Translates to: CLGPCVDASRAVGRS*KAEWLLQGRPCAQS
Trigger: GCTCTGCGCACACGGGCGTCCCTGCAGCAGCCACTCTGCTTTCCAGGACCGGCCAACTGCCCTGGAGGCATCCACACAGGGGCCCAGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS GCA 90 bp TGGATGCCTCCAGGGCAGTTGGCCGGTCCTGGAAAGCAGAGTGGCTaGTGCAGGGACGCCCGTGTGCGCAGAGCTCGCCTTCCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: WMPPGQLAGPGKQSG*CRDARVRRARLPWL
Trigger: GAGCCAGGGAAGGCGAGCTCTGCGCACACGGGCGTCCCTGCAGCAGCCACTCTGCTTTCCAGGACCGGCCAACTGCCCTGGAGGCATCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS GCA 90 bp AGTGCGCCGTCTTCCCGGGAAGCGGAGGCCGGCCTGTGCCGCGCGTaGCTCTTCTCGCCTGCAGCAGTGGAAAACAGAGTCACTCGGGAG +
Preference number: 5 (lower is better)
Translates to: SAPSSREAEAGLCRA*LFSPAAVENRVTRE
Trigger: CTCCCGAGTGACTCTGTTTTCCACTGCTGCAGGCGAGAAGAGGCACGCGCGGCACAGGCCGGCCTCCGCTTCCCGGGAAGACGGCGCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS CCA 90 bp TCCTCTGTGCTGCCTGGGCCCCTGTGTGGATGCCTCCAGGGCAGTTaGCCGGTCCTGGAAAGCAGAGTGGCTGCTGCAGGGACGCCCGTG +
Preference number: 5 (lower is better)
Translates to: SSVLPGPLCGCLQGS*PVLESRVAAAGTPV
Trigger: CACGGGCGTCCCTGCAGCAGCCACTCTGCTTTCCAGGACCGGCCAACTGCCCTGGAGGCATCCACACAGGGGCCCAGGCAGCACAGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS GCA 90 bp ATGAGTGAGACCAGGGCCACCAGCACGGCCGCGGCCACGAGTCTCTaGACGGTCATCGCTGACGCCGGTGCCGCCGCTTATCCGGAGAAA +
Preference number: 5 (lower is better)
Translates to: MSETRATSTAAATSL*TVIADAGAAAYPEK
Trigger: TTTCTCCGGATAAGCGGCGGCACCGGCGTCAGCGATGACCGTGCAGAGACTCGTGGCCGCGGCCGTGCTGGTGGCCCTGGTCTCACTCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS GCA 90 bp GTCGAACTGCAGTTTGACGGTGCCTCGGGACTCCTGGAAGCCGGCTaGCTCGGAGCCCCAGCCCAGCGCCTCACAGTCATGTGCGTCCAC +
Preference number: 5 (lower is better)
Translates to: VELQFDGASGLLEAG*LGAPAQRLTVMCVH
Trigger: GTGGACGCACATGACTGTGAGGCGCTGGGCTGGGGCTCCGAGGCAGCCGGCTTCCAGGAGTCCCGAGGCACCGTCAAACTGCAGTTCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS GCA 90 bp ATGCCTCCAGGGCAGTTGGCCGGTCCTGGAAAGCAGAGTGGCTGCTaGAGGGACGCCCGTGTGCGCAGAGCTCGCCTTCCCTGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: MPPGQLAGPGKQSGC*RDARVRRARLPWLS
Trigger: TGAGAGCCAGGGAAGGCGAGCTCTGCGCACACGGGCGTCCCTGCAGCAGCCACTCTGCTTTCCAGGACCGGCCAACTGCCCTGGAGGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS CCA 90 bp GACCTCCACAGCCCCACGCTGCGCCTGCGCCCATCCTCCAGCGTCTaGCACACCCAGTTGGAGGTGAAGGCCGCCACGTTGTTGAGGATG +
Preference number: 5 (lower is better)
Translates to: DLHSPTLRLRPSSSV*HTQLEVKAATLLRM
Trigger: CATCCTCAACAACGTGGCGGCCTTCACCTCCAACTGGGTGTGCCAGACGCTGGAGGATGGGCGCAGGCGCAGCGTGGGGCTGTGGAGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS CCA 90 bp GCGCGCATCATGTCGAACTGCAGTTTGACGGTGCCTCGGGACTCCTaGAAGCCGGCTGCCTCGGAGCCCCAGCCCAGCGCCTCACAGTCA +
Preference number: 5 (lower is better)
Translates to: ARIMSNCSLTVPRDS*KPAASEPQPSASQS
Trigger: TGACTGTGAGGCGCTGGGCTGGGGCTCCGAGGCAGCCGGCTTCCAGGAGTCCCGAGGCACCGTCAAACTGCAGTTCGACATGATGCGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS CCA 90 bp TGTGTGGATGCCTCCAGGGCAGTTGGCCGGTCCTGGAAAGCAGAGTaGCTGCTGCAGGGACGCCCGTGTGCGCAGAGCTCGCCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: CVDASRAVGRSWKAE*LLQGRPCAQSSPSL
Trigger: CAGGGAAGGCGAGCTCTGCGCACACGGGCGTCCCTGCAGCAGCCACTCTGCTTTCCAGGACCGGCCAACTGCCCTGGAGGCATCCACACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS TCA 90 bp GCACACCCAGTTGGAGGTGAAGGCCGCCACGTTGTTGAGGATGAGTaGGACCAGGGCCACCAGCACGGCCGCGGCCACGAGTCTCTGCAC +
Preference number: 5 (lower is better)
Translates to: AHPVGGEGRHVVEDE*DQGHQHGRGHESLH
Trigger: GTGCAGAGACTCGTGGCCGCGGCCGTGCTGGTGGCCCTGGTCTCACTCATCCTCAACAACGTGGCGGCCTTCACCTCCAACTGGGTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CAA 90 bp GAAGTGCGTGTGGTCGTGGAGCCGCGTTGCGCTAACCAGGAAAGCTGGAGGCAGGTCTGGCACACCCAGTaGGAGGTGAAGGCCGCCACG +
Preference number: 5 (lower is better)
Translates to: EVRVVVEPRCANQESWRQVWHTQ*EVKAAT
Trigger: CGTGGCGGCCTTCACCTCCAACTGGGTGTGCCAGAC...CTGCCTCCAGCTTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CAA 90 bp GCTTCCACCCTGAAGTGCGTGTGGTCGTGGAGCCGCGTTGCGCTAACCAGGAAAGCCGTGGCCACCAGGTaGCAGGCGCGCATCATGTCG +
Preference number: 5 (lower is better)
Translates to: ASTLKCVWSWSRVALTRKAVATR*QARIMS
Trigger: CGACATGATGCGCGCCTGCAACCTGGTGGCCACGGC...TTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTCAGGGTGGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CAA 90 bp TCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCCTTGGTCTGGCACACCCAGTaGGAGGTGAAGGCCGCCACG +
Preference number: 5 (lower is better)
Translates to: SSRASARAGEVTWWWSPLVWHTQ*EVKAAT
Trigger: CGTGGCGGCCTTCACCTCCAACTGGGTGTGCCAGAC...CAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CAA 90 bp CGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCCTTGGTTTCTGCCGTGGCCACCAGGTaGCAGGCGCGCATCATGTCG +
Preference number: 5 (lower is better)
Translates to: RASARAGEVTWWWSPLVSAVATR*QARIMS
Trigger: CGACATGATGCGCGCCTGCAACCTGGTGGCCACGGC...AGAAACCAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CAA 90 bp GCACACGTGTCTCGCACGCATGGCGCAGAGGTCACCCAGACTCATCCCGTGCCTGGAGGCAGAACGAGGTaGGCCCACGACACGTACAGA +
Preference number: 5 (lower is better)
Translates to: AHVSRTHGAEVTQTHPVPGGRTR*AHDTYR
Trigger: TCTGTACGTGTCGTGGGCCAACCTCGTTCTGCCTCC...AGGCACGGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCGAGACACGTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CAA 90 bp TTCCACCCTGAAGTGCGTGTGGTCGTGGAGCCGCGTTGCGCTAACCAGGAAAGCATGCCTCCAGGGCAGTaGGCCGGTCCTGGAAAGCAG +
Preference number: 5 (lower is better)
Translates to: FHPEVRVVVEPRCANQESMPPGQ*AGPGKQ
Trigger: CTGCTTTCCAGGACCGGCCAACTGCCCTGGAGGCAT...GCTTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTCAGGGTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS GCA 90 bp CATGCAGTCCTCCCTCTTGTGGAGAATGTTCCAGATGAGCATGGCTaGCGCCAGCGTGGCCAGAAGGCAGGCGCCAATGTTCAGGTAGCA +
Preference number: 5 (lower is better)
Translates to: HAVLPLVENVPDEHG*RQRGQKAGANVQVA
Trigger: TGCTACCTGAACATTGGCGCCTGCCTTCTGGCCACGCTGGCGGCAGCCATGCTCATCTGGAACATTCTCCACAAGAGGGAGGACTGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CAA 90 bp CGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCCTTGGTTTCTAGGCTGTTCCACGTGAAGGCCGCCACGTaGTTGAGGATGAGTGAGACC +
Preference number: 5 (lower is better)
Translates to: RAGEVTWWWSPLVSRLFHVKAAT*LRMSET
Trigger: GGTCTCACTCATCCTCAACAACGTGGCGGCCTTCAC...GTGGAACAGCCTAGAAACCAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CAA 90 bp CGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCCTTGGTTTCTCAGGACCAGGACAGGTaGGTGTATGGGCCAATTCTG +
Preference number: 5 (lower is better)
Translates to: RASARAGEVTWWWSPLVSQDQDR*VYGPIL
Trigger: CAGAATTGGCCCATACACCAACCTGTCCTGGTCCTG...AGAAACCAAGGGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CAA 90 bp AACGCACACGTGTCTCGCACGCATGGCGCAGAGGTCACCCAGACTCATCCCGTGATGCAGTCCTCCCTCTaGTGGAGAATGTTCCAGATG +
Preference number: 5 (lower is better)
Translates to: NAHVSRTHGAEVTQTHPVMQSSL*WRMFQM
Trigger: CATCTGGAACATTCTCCACAAGAGGGAGGACTGCAT...CACGGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCGAGACACGTGTGCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CAA 90 bp AGACTCATCCCGTGCCTCTGCACGAGCAGGGGAAGTGACTTGGTGGTGGAGTCCATGCAGTCCTCCCTCTaGTGGAGAATGTTCCAGATG +
Preference number: 5 (lower is better)
Translates to: RLIPCLCTSRGSDLVVESMQSSL*WRMFQM
Trigger: CATCTGGAACATTCTCCACAAGAGGGAGGACTGCAT...GGACTCCACCACCAAGTCACTTCCCCTGCTCGTGCAGAGGCACGGGATGAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CAA 90 bp AGTCCCTTGGTTTCTAGGCTGTTCCACGATAGCAGGTGTGCGTTGATGGAGCGCTGGTGGTGGAGTCCCTaGGTTTCTAGGCTGTTCCAC +
Preference number: 5 (lower is better)
Translates to: SPLVSRLFHDSRCALMERWWWSP*VSRLFH
Trigger: GTGGAACAGCCTAGAAACCAAGGGACTCCACCACCA...GCGCTCCATCAACGCACACCTGCTATCGTGGAACAGCCTAGAAACCAAGGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS TCA 90 bp GTTTCTAGGCTGTTCCACGATAGCAGGTGTGCGTTGATGGAGCGCTaGGAAGGGCGACTCAGCATGGTGACTCCACGTAGTCATTGTCCA +
Preference number: 5 (lower is better)
Translates to: VSRLFHDSRCALMER*EGRLSMVTPRSHCP
Trigger: TGGACAATGACTACGTGGAGTCACCATGCTGAGTCGCCCTTCTCAGCGCTCCATCAACGCACACCTGCTATCGTGGAACAGCCTAGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS CCA 90 bp GCAGGCGCCAATGTTCAGGTAGCAGGACCAGGACAGGTTGGTGTATaGGCCAATTCTGTAGAAAGTCACGAGCCCGATGACCAGGACAAA +
Preference number: 5 (lower is better)
Translates to: AGANVQVAGPGQVGV*ANSVESHEPDDQDK
Trigger: TTTGTCCTGGTCATCGGGCTCGTGACTTTCTACAGAATTGGCCCATACACCAACCTGTCCTGGTCCTGCTACCTGAACATTGGCGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CAA 90 bp GGCAGAACGAGGTTGGCCCACGACACGTACAGACATATGACCGACATAACAGTAGTGAAGGCCGCCACGTaGTTGAGGATGAGTGAGACC +
Preference number: 5 (lower is better)
Translates to: GRTRLAHDTYRHMTDITVVKAAT*LRMSET
Trigger: GGTCTCACTCATCCTCAACAACGTGGCGGCCTTCAC...TACTGTTATGTCGGTCATATGTCTGTACGTGTCGTGGGCCAACCTCGTTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CAA 90 bp CACGACACGTACAGACATATGACCGACATAACAGTAAACGCACACGTGTCTCGCGGAGGCAGAACGAGGTaGGCCCACGACACGTACAGA +
Preference number: 5 (lower is better)
Translates to: HDTYRHMTDITVNAHVSRGGRTR*AHDTYR
Trigger: TCTGTACGTGTCGTGGGCCAACCTCGTTCTGCCTCC...GCGAGACACGTGTGCGTTTACTGTTATGTCGGTCATATGTCTGTACGTGTCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CAA 90 bp TGCCCCTCTCAGCAGATGCAGAATAAATTAATCCCAAAGCAAAGCGGAGCGCAGATGTCGAACTGCAGTTaGACGGTGCCTCGGGACTCC +
Preference number: 5 (lower is better)
Translates to: CPSQQMQNKLIPKQSGAQMSNCS*TVPRDS
Trigger: GGAGTCCCGAGGCACCGTCAAACTGCAGTTCGACAT...CTGCGCTCCGCTTTGCTTTGGGATTAATTTATTCTGCATCTGCTGAGAGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CAA 90 bp GGCAGAACGAGGTTGGCCCACGACACGTACAGACATATGACCGACATAACAGTATGGTGGTGGAGTCCCTaGGTTTCTAGGCTGTTCCAC +
Preference number: 5 (lower is better)
Translates to: GRTRLAHDTYRHMTDITVWWWSP*VSRLFH
Trigger: GTGGAACAGCCTAGAAACCAAGGGACTCCACCACCA...TACTGTTATGTCGGTCATATGTCTGTACGTGTCGTGGGCCAACCTCGTTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS-3UTR CAA 90 bp CACACGTGTCTCGCACGCATGGCGCAGAGGTCACCCAGACTCATCCCGTGCCTCACAGAGTTCAGAGGCTaGCATTTATTTAACTTAGGA +
Preference number: 5 (lower is better)
Translates to: HTCLARMAQRSPRLIPCLTEFRG*HLFNLG
Trigger: TCCTAAGTTAAATAAATGCAAGCCTCTGAACTCTGT...GAGGCACGGGATGAGTCTGGGTGACCTCTGCGCCATGCGTGCGAGACACGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253934.9
CDS-3UTR CAA 90 bp TTTCTGCTTTACCAAAGTGTAAGATATGGCTGGGGTGCCCCTCTCAGCAGATGCCAGGACCAGGACAGGTaGGTGTATGGGCCAATTCTG +
Preference number: 5 (lower is better)
Translates to: FLLYQSVRYGWGAPLSRCQDQDR*VYGPIL
Trigger: CAGAATTGGCCCATACACCAACCTGTCCTGGTCCTG...GCATCTGCTGAGAGGGGCACCCCAGCCATATCTTACACTTTGGTAAAGCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS GCA 72 bp TGCCTCGGAGCCCCAGCCCAGCGCCTCACAGTCATGTaGGTCCACCTGGCCGGCTCTGGCCCCAGGGCTCGG +
Preference number: 6 (lower is better)
Translates to: CLGAPAQRLTVM*VHLAGSGPRAR
Trigger: CCGAGCCCTGGGGCCAGAGCCGGCCAGGTGGACGCACATGACTGTGAGGCGCTGGGCTGGGGCTCCGAGGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS GCA 72 bp CCCGCGCCACACTCCTTAGCACCGGCCTGCTGTGAGTaGCAGGCTCCGGGCAGGGTGGCCGGTGTGGAGCGG +
Preference number: 6 (lower is better)
Translates to: PAPHSLAPACCE*QAPGRVAGVER
Trigger: CCGCTCCACACCGGCCACCCTGCCCGGAGCCTGGCACTCACAGCAGGCCGGTGCTAAGGAGTGTGGCGCGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS CCA 72 bp TCATCCTCGGGGCGGCGCGGGCGGAGGCCCATGGGATaGTCCAGGTGTGCCGCCTCTCGGCCCGGCCTTATC +
Preference number: 6 (lower is better)
Translates to: SSSGRRGRRPMG*SRCAASRPGLI
Trigger: GATAAGGCCGGGCCGAGAGGCGGCACACCTGGACCATCCCATGGGCCTCCGCCCGCGCCGCCCCGAGGATGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS TCA 72 bp CGAGCCCGCGCCACACTCCTTAGCACCGGCCTGCTGTaGGTGCCAGGCTCCGGGCAGGGTGGCCGGTGTGGA +
Preference number: 6 (lower is better)
Translates to: RARATLLSTGLL*VPGSGQGGRCG
Trigger: TCCACACCGGCCACCCTGCCCGGAGCCTGGCACTCACAGCAGGCCGGTGCTAAGGAGTGTGGCGCGGGCTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS GCA 72 bp GGAGTCGAGCCCGCGCCACACTCCTTAGCACCGGCCTaGTGTGAGTGCCAGGCTCCGGGCAGGGTGGCCGGT +
Preference number: 6 (lower is better)
Translates to: GVEPAPHSLAPA*CECQAPGRVAG
Trigger: ACCGGCCACCCTGCCCGGAGCCTGGCACTCACAGCAGGCCGGTGCTAAGGAGTGTGGCGCGGGCTCGACTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS GCA 72 bp ACCAGGGCCACCAGCACGGCCGCGGCCACGAGTCTCTaGACGGTCATCGCTGACGCCGGTGCCGCCGCTTAT +
Preference number: 6 (lower is better)
Translates to: TRATSTAAATSL*TVIADAGAAAY
Trigger: ATAAGCGGCGGCACCGGCGTCAGCGATGACCGTGCAGAGACTCGTGGCCGCGGCCGTGCTGGTGGCCCTGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS CCA 72 bp CACCGGCCTGCTGTGAGTGCCAGGCTCCGGGCAGGGTaGCCGGTGTGGAGCGGGTTCACAGCTCCTCTGTGC +
Preference number: 6 (lower is better)
Translates to: HRPAVSARLRAG*PVWSGFTAPLC
Trigger: GCACAGAGGAGCTGTGAACCCGCTCCACACCGGCCACCCTGCCCGGAGCCTGGCACTCACAGCAGGCCGGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS GCA 72 bp GGGCAGTTGGCCGGTCCTGGAAAGCAGAGTGGCTGCTaGAGGGACGCCCGTGTGCGCAGAGCTCGCCTTCCC +
Preference number: 6 (lower is better)
Translates to: GQLAGPGKQSGC*RDARVRRARLP
Trigger: GGGAAGGCGAGCTCTGCGCACACGGGCGTCCCTGCAGCAGCCACTCTGCTTTCCAGGACCGGCCAACTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS GCA 72 bp GGAGGCCGGCCTGTGCCGCGCGTGCCTCTTCTCGCCTaGAGCAGTGGAAAACAGAGTCACTCGGGAGGCCGG +
Preference number: 6 (lower is better)
Translates to: GGRPVPRVPLLA*SSGKQSHSGGR
Trigger: CCGGCCTCCCGAGTGACTCTGTTTTCCACTGCTGCAGGCGAGAAGAGGCACGCGCGGCACAGGCCGGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS CCA 72 bp CGCCTCTCGGCCCGGCCTTATCCTCCTTCCTGCACCTaGAGCAGGGCCAGGCCTGTGCTGAAGCTGCTCGCC +
Preference number: 6 (lower is better)
Translates to: RLSARPYPPSCT*SRARPVLKLLA
Trigger: GGCGAGCAGCTTCAGCACAGGCCTGGCCCTGCTCCAGGTGCAGGAAGGAGGATAAGGCCGGGCCGAGAGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS CCA 72 bp AGCCCCACGCTGCGCCTGCGCCCATCCTCCAGCGTCTaGCACACCCAGTTGGAGGTGAAGGCCGCCACGTTG +
Preference number: 6 (lower is better)
Translates to: SPTLRLRPSSSV*HTQLEVKAATL
Trigger: CAACGTGGCGGCCTTCACCTCCAACTGGGTGTGCCAGACGCTGGAGGATGGGCGCAGGCGCAGCGTGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS CAA 90 bp CTCCTCTGTGCTGCCTGGGCCCCTGTGTGGATGCCTCCAGGGCAGTaGGCCGGTCCTGGAAAGCAGAGTGGCTGCTGCAGGGACGCCCGT +
Preference number: 6 (lower is better)
Translates to: LLCAAWAPVWMPPGQ*AGPGKQSGCCRDAR
Trigger: ACGGGCGTCCCTGCAGCAGCCACTCTGCTTTCCAGGACCGGCCAACTGCCCTGGAGGCATCCACACAGGGGCCCAGGCAGCACAGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS GCA 72 bp CAGTTTGACGGTGCCTCGGGACTCCTGGAAGCCGGCTaGCTCGGAGCCCCAGCCCAGCGCCTCACAGTCATG +
Preference number: 6 (lower is better)
Translates to: QFDGASGLLEAG*LGAPAQRLTVM
Trigger: CATGACTGTGAGGCGCTGGGCTGGGGCTCCGAGGCAGCCGGCTTCCAGGAGTCCCGAGGCACCGTCAAACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS GCA 72 bp CCAGGGCAGTTGGCCGGTCCTGGAAAGCAGAGTGGCTaGTGCAGGGACGCCCGTGTGCGCAGAGCTCGCCTT +
Preference number: 6 (lower is better)
Translates to: PGQLAGPGKQSG*CRDARVRRARL
Trigger: AAGGCGAGCTCTGCGCACACGGGCGTCCCTGCAGCAGCCACTCTGCTTTCCAGGACCGGCCAACTGCCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS CCA 72 bp ATGTCGAACTGCAGTTTGACGGTGCCTCGGGACTCCTaGAAGCCGGCTGCCTCGGAGCCCCAGCCCAGCGCC +
Preference number: 6 (lower is better)
Translates to: MSNCSLTVPRDS*KPAASEPQPSA
Trigger: GGCGCTGGGCTGGGGCTCCGAGGCAGCCGGCTTCCAGGAGTCCCGAGGCACCGTCAAACTGCAGTTCGACAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS CAA 90 bp TCCAGCGTCTGGCACACCCAGTTGGAGGTGAAGGCCGCCACGTTGTaGAGGATGAGTGAGACCAGGGCCACCAGCACGGCCGCGGCCACG +
Preference number: 6 (lower is better)
Translates to: SSVWHTQLEVKAATL*RMSETRATSTAAAT
Trigger: CGTGGCCGCGGCCGTGCTGGTGGCCCTGGTCTCACTCATCCTCAACAACGTGGCGGCCTTCACCTCCAACTGGGTGTGCCAGACGCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS CAA 90 bp AGGAAGGTGAGCTGGCCTGCGGTGAGCGCGGCCGTGGCCACCAGGTaGCAGGCGCGCATCATGTCGAACTGCAGTTTGACGGTGCCTCGG +
Preference number: 6 (lower is better)
Translates to: RKVSWPAVSAAVATR*QARIMSNCSLTVPR
Trigger: CCGAGGCACCGTCAAACTGCAGTTCGACATGATGCGCGCCTGCAACCTGGTGGCCACGGCCGCGCTCACCGCAGGCCAGCTCACCTTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS TCA 72 bp GTTGGAGGTGAAGGCCGCCACGTTGTTGAGGATGAGTaGGACCAGGGCCACCAGCACGGCCGCGGCCACGAG +
Preference number: 6 (lower is better)
Translates to: VGGEGRHVVEDE*DQGHQHGRGHE
Trigger: CTCGTGGCCGCGGCCGTGCTGGTGGCCCTGGTCTCACTCATCCTCAACAACGTGGCGGCCTTCACCTCCAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS GCA 72 bp TCTTCCCGGGAAGCGGAGGCCGGCCTGTGCCGCGCGTaGCTCTTCTCGCCTGCAGCAGTGGAAAACAGAGTC +
Preference number: 6 (lower is better)
Translates to: SSREAEAGLCRA*LFSPAAVENRV
Trigger: GACTCTGTTTTCCACTGCTGCAGGCGAGAAGAGGCACGCGCGGCACAGGCCGGCCTCCGCTTCCCGGGAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566264.2
CDS CAA 72 bp AGCTGGCCTGCGGTGAGCGCGGCCGTGGCCACCAGGTaGCAGGCGCGCATCATGTCGAACTGCAGTTTGACG +
Preference number: 6 (lower is better)
Translates to: SWPAVSAAVATR*QARIMSNCSLT
Trigger: CGTCAAACTGCAGTTCGACATGATGCGCGCCTGCAACCTGGTGGCCACGGCCGCGCTCACCGCAGGCCAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS CAA 90 bp CCCACGCTGCGCCTGCGCCCATCCTCCAGCGTCTGGCACACCCAGTaGGAGGTGAAGGCCGCCACGTTGTTGAGGATGAGTGAGACCAGG +
Preference number: 6 (lower is better)
Translates to: PTLRLRPSSSVWHTQ*EVKAATLLRMSETR
Trigger: CCTGGTCTCACTCATCCTCAACAACGTGGCGGCCTTCACCTCCAACTGGGTGTGCCAGACGCTGGAGGATGGGCGCAGGCGCAGCGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS GCA 72 bp GAGCCCGATGACCAGGACAAAACTCGCCAGTTGGAATaGAGCGGCCATGGCCTCCTCCCAGCACGGGGCGTC +
Preference number: 6 (lower is better)
Translates to: EPDDQDKTRQLE*SGHGLLPARGV
Trigger: GACGCCCCGTGCTGGGAGGAGGCCATGGCCGCTGCATTCCAACTGGCGAGTTTTGTCCTGGTCATCGGGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS CAA 72 bp TGGCACACCCAGTTGGAGGTGAAGGCCGCCACGTTGTaGAGGATGAGTGAGACCAGGGCCACCAGCACGGCC +
Preference number: 6 (lower is better)
Translates to: WHTQLEVKAATL*RMSETRATSTA
Trigger: GGCCGTGCTGGTGGCCCTGGTCTCACTCATCCTCAACAACGTGGCGGCCTTCACCTCCAACTGGGTGTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS CAA 72 bp CGCCTGCGCCCATCCTCCAGCGTCTGGCACACCCAGTaGGAGGTGAAGGCCGCCACGTTGTTGAGGATGAGT +
Preference number: 6 (lower is better)
Translates to: RLRPSSSVWHTQ*EVKAATLLRMS
Trigger: ACTCATCCTCAACAACGTGGCGGCCTTCACCTCCAACTGGGTGTGCCAGACGCTGGAGGATGGGCGCAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS TCA 72 bp CCATGCAGTCCTCCCTCTTGTGGAGAATGTTCCAGATaGGCATGGCTGCCGCCAGCGTGGCCAGAAGGCAGG +
Preference number: 6 (lower is better)
Translates to: PCSPPSCGECSR*AWLPPAWPEGR
Trigger: CCTGCCTTCTGGCCACGCTGGCGGCAGCCATGCTCATCTGGAACATTCTCCACAAGAGGGAGGACTGCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS GCA 72 bp CTCCCTCTTGTGGAGAATGTTCCAGATGAGCATGGCTaGCGCCAGCGTGGCCAGAAGGCAGGCGCCAATGTT +
Preference number: 6 (lower is better)
Translates to: LPLVENVPDEHG*RQRGQKAGANV
Trigger: AACATTGGCGCCTGCCTTCTGGCCACGCTGGCGGCAGCCATGCTCATCTGGAACATTCTCCACAAGAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS TCA 72 bp CTGTTCCACGATAGCAGGTGTGCGTTGATGGAGCGCTaGGAAGGGCGACTCAGCATGGTGACTCCACGTAGT +
Preference number: 6 (lower is better)
Translates to: LFHDSRCALMER*EGRLSMVTPRS
Trigger: ACTACGTGGAGTCACCATGCTGAGTCGCCCTTCTCAGCGCTCCATCAACGCACACCTGCTATCGTGGAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS CCA 72 bp AGGCGCCAATGTTCAGGTAGCAGGACCAGGACAGGTTaGTGTATGGGCCAATTCTGTAGAAAGTCACGAGCC +
Preference number: 6 (lower is better)
Translates to: RRQCSGSRTRTG*CMGQFCRKSRA
Trigger: GGCTCGTGACTTTCTACAGAATTGGCCCATACACCAACCTGTCCTGGTCCTGCTACCTGAACATTGGCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS TCA 72 bp TGTATGGGCCAATTCTGTAGAAAGTCACGAGCCCGATaGCCAGGACAAAACTCGCCAGTTGGAATGCAGCGG +
Preference number: 6 (lower is better)
Translates to: CMGQFCRKSRAR*PGQNSPVGMQR
Trigger: CCGCTGCATTCCAACTGGCGAGTTTTGTCCTGGTCATCGGGCTCGTGACTTTCTACAGAATTGGCCCATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2
CDS CCA 72 bp AATGTTCAGGTAGCAGGACCAGGACAGGTTGGTGTATaGGCCAATTCTGTAGAAAGTCACGAGCCCGATGAC +
Preference number: 6 (lower is better)
Translates to: NVQVAGPGQVGV*ANSVESHEPDD
Trigger: GTCATCGGGCTCGTGACTTTCTACAGAATTGGCCCATACACCAACCTGTCCTGGTCCTGCTACCTGAACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253934.9
ENST00000566264.2