RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM200C (Homo sapiens)

Ensembl gene IDs: ENSG00000206432

Ensembl transcript IDs: ENST00000383490.2, ENST00000581347.2

Found 398 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCTAGGAGATGCCAACAGCTGGGTCCAATCTCAGCTCGGAATCTaGACTCTGTCTACAGGACTAGCGCTTTGCCCAAGGAGACCAAAA +
Preference number: 1 (lower is better)
Translates to: QLGDANSWVQSQLGI*TLSTGLALCPRRPK
Trigger: TTTTGGTCTCCTTGGGCAAAGCGCTAGTCCTGTAGACAGAGTGCAGATTCCGAGCTGAGATTGGACCCAGCTGTTGGCATCTCCTAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR CCA 90 bp GTTTGTGACTTGTACAAGGCCTCACAGCTAGGAGATGCCAACAGCTaGGTCCAATCTCAGCTCGGAATCTGCACTCTGTCTACAGGACTA +
Preference number: 1 (lower is better)
Translates to: VCDLYKASQLGDANS*VQSQLGICTLSTGL
Trigger: TAGTCCTGTAGACAGAGTGCAGATTCCGAGCTGAGATTGGACCCAGCTGTTGGCATCTCCTAGCTGTGAGGCCTTGTACAAGTCACAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR CCA 90 bp GCCTATTTTCCTCCCTTGTTATTGACAGTCAGCCTTCGTGGGACTTaGTCACAATGTAGGATCAGAAAGCACAGGTTATTGAGACAGGCC +
Preference number: 1 (lower is better)
Translates to: AYFPPLLLTVSLRGT*SQCRIRKHRLLRQA
Trigger: GGCCTGTCTCAATAACCTGTGCTTTCTGATCCTACATTGTGACCAAGTCCCACGAAGGCTGACTGTCAATAACAAGGGAGGAAAATAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 90 bp TGGTTCTCTTCATTTTACAGAAAGATGACTGAGACTCAGAGTTTGTaGCTTGTACAAGGCCTCACAGCTAGGAGATGCCAACAGCTGGGT +
Preference number: 1 (lower is better)
Translates to: WFSSFYRKMTETQSL*LVQGLTARRCQQLG
Trigger: ACCCAGCTGTTGGCATCTCCTAGCTGTGAGGCCTTGTACAAGTCACAAACTCTGAGTCTCAGTCATCTTTCTGTAAAATGAAGAGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 90 bp GCTGTCTCCAGTCTTTACGGTACATGGATCAACACACTTGATCCATaGTGCAAACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTT +
Preference number: 1 (lower is better)
Translates to: AVSSLYGTWINTLDP*CKQCCQVTDSPLSF
Trigger: AAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGTTTGCATCATGGATCAAGTGTGTTGATCCATGTACCGTAAAGACTGGAGACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 90 bp TTGTGGACGCAATTCAAGGATAACATTCTGCAGCTCTTTGGATATTaGATGATGTCCTCGGATCAGTCCACAAAAGAAACAGGGACCTGT +
Preference number: 1 (lower is better)
Translates to: LWTQFKDNILQLFGY*MMSSDQSTKETGTC
Trigger: ACAGGTCCCTGTTTCTTTTGTGGACTGATCCGAGGACATCATTCAATATCCAAAGAGCTGCAGAATGTTATCCTTGAATTGCGTCCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 90 bp AGTTTATGCTGTCTCCAGTCTTTACGGTACATGGATCAACACACTTaGTCCATGATGCAAACAGTGTTGCCAAGTGACAGATTCTCCTCT +
Preference number: 1 (lower is better)
Translates to: SLCCLQSLRYMDQHT*SMMQTVLPSDRFSS
Trigger: AGAGGAGAATCTGTCACTTGGCAACACTGTTTGCATCATGGATCAAGTGTGTTGATCCATGTACCGTAAAGACTGGAGACAGCATAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR GCA 90 bp AAGTATTTTGATGGTCTCCAGAAATGCCCATTTCAACTCAGCATCTaGCGACAGGTCTACCTAATCTTCCAAACTCTGTGTAAATCCTGG +
Preference number: 1 (lower is better)
Translates to: KYFDGLQKCPFQLSI*RQVYLIFQTLCKSW
Trigger: CCAGGATTTACACAGAGTTTGGAAGATTAGGTAGACCTGTCGGCAGATGCTGAGTTGAAATGGGCATTTCTGGAGACCATCAAAATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR CCA 90 bp TGCCAGTCCACAAACAATACTCATACACATTTGCGACAGTATGTCTaGGTCTTAACCTTTCCTTTTGCTATGAACGCATACGTGAGGAAC +
Preference number: 1 (lower is better)
Translates to: CQSTNNTHTHLRQYV*VLTFPFAMNAYVRN
Trigger: GTTCCTCACGTATGCGTTCATAGCAAAAGGAAAGGTTAAGACCCAGACATACTGTCGCAAATGTGTATGAGTATTGTTTGTGGACTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 90 bp GGACGCAATTCAAGGATAACATTCTGCAGCTCTTTGGATATTGAATaGTGTCCTCGGATCAGTCCACAAAAGAAACAGGGACCTGTTAAT +
Preference number: 1 (lower is better)
Translates to: GRNSRITFCSSLDIE*CPRISPQKKQGPVN
Trigger: ATTAACAGGTCCCTGTTTCTTTTGTGGACTGATCCGAGGACATCATTCAATATCCAAAGAGCTGCAGAATGTTATCCTTGAATTGCGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 90 bp AGTCCTGGTAGCAGTGTCACAGCAAAATATTTCAGAGGTACCAGATaGGCTAGCTCCAAGGCAAATGAGGCAATATTATGTTTAACTGTT +
Preference number: 1 (lower is better)
Translates to: SPGSSVTAKYFRGTR*ASSKANEAILCLTV
Trigger: AACAGTTAAACATAATATTGCCTCATTTGCCTTGGAGCTAGCTCATCTGGTACCTCTGAAATATTTTGCTGTGACACTGCTACCAGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 90 bp AGGACTGGAAACAGTATTGTAGAACACCAGAACCTGTTTTCCCCTTaGAGTAACACGCTATCTCAGTATATAAATTACCCAGTACCCAAG +
Preference number: 1 (lower is better)
Translates to: RTGNSIVEHQNLFSP*SNTLSQYINYPVPK
Trigger: CTTGGGTACTGGGTAATTTATATACTGAGATAGCGTGTTACTTCAAGGGGAAAACAGGTTCTGGTGTTCTACAATACTGTTTCCAGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 90 bp CTCCAGGAGAATCTGCATAATCTTTTTCGGTCTTTTCACCAGCAATaGCAGTATGTTATCTTACTAACGAATCAGCCCATGTCCATGTCA +
Preference number: 1 (lower is better)
Translates to: LQENLHNLFRSFHQQ*QYVILLTNQPMSMS
Trigger: TGACATGGACATGGGCTGATTCGTTAGTAAGATAACATACTGTCATTGCTGGTGAAAAGACCGAAAAAGATTATGCAGATTCTCCTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 90 bp GTACCAAGCTCCTACAATAGTACTGAACCCACAGTAAGTACTGAGTaGAAATTAGCATTATTGCAGATTTCTGCTCCTATGAAAGTTACG +
Preference number: 1 (lower is better)
Translates to: VPSSYNSTEPTVSTE*KLALLQISAPMKVT
Trigger: CGTAACTTTCATAGGAGCAGAAATCTGCAATAATGCTAATTTTCACTCAGTACTTACTGTGGGTTCAGTACTATTGTAGGAGCTTGGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 90 bp TACATGAATCAAAGAAAGGTTCTAGTTTTGGACATCCATGGGATTTaGGGAACGAGGAGATTGCAAACATGCACTTCAATTGTGTTTTGG +
Preference number: 1 (lower is better)
Translates to: YMNQRKVLVLDIHGI*GTRRLQTCTSIVFW
Trigger: CCAAAACACAATTGAAGTGCATGTTTGCAATCTCCTCGTTCCTCAAATCCCATGGATGTCCAAAACTAGAACCTTTCTTTGATTCATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR CCA 90 bp AATATCCTACATGAATCAAAGAAAGGTTCTAGTTTTGGACATCCATaGGATTTGAGGAACGAGGAGATTGCAAACATGCACTTCAATTGT +
Preference number: 1 (lower is better)
Translates to: NILHESKKGSSFGHP*DLRNEEIANMHFNC
Trigger: ACAATTGAAGTGCATGTTTGCAATCTCCTCGTTCCTCAAATCCCATGGATGTCCAAAACTAGAACCTTTCTTTGATTCATGTAGGATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 90 bp ATTTTCAATACAGGTGTGATAACACTCAATAAAGCATGGTGTACTTaGTATAAATTTCGGAATGTAACAGTCCATCTAGTTCCTGGTCCC +
Preference number: 1 (lower is better)
Translates to: IFNTGVITLNKAWCT*YKFRNVTVHLVPGP
Trigger: GGGACCAGGAACTAGATGGACTGTTACATTCCGAAATTTATATCAAGTACACCATGCTTTATTGAGTGTTATCACACCTGTATTGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR GCA 90 bp GGTCTTATTACACTTGCATGTCACTCCTTAGTGCAAACTCACTTTTaGTTTATAGAAGAGCCCAATATATTAATCTACAGCCTTAAAGTG +
Preference number: 1 (lower is better)
Translates to: GLITLACHSLVQTHF*FIEEPNILIYSLKV
Trigger: CACTTTAAGGCTGTAGATTAATATATTGGGCTCTTCTATAAAGCAAAAGTGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR GCA 90 bp TTGAGACTGTTGAAATTTAACACTACCTTGAGGTCTTATTACACTTaGATGTCACTCCTTAGTGCAAACTCACTTTTGCTTTATAGAAGA +
Preference number: 1 (lower is better)
Translates to: LRLLKFNTTLRSYYT*MSLLSANSLLLYRR
Trigger: TCTTCTATAAAGCAAAAGTGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGACCTCAAGGTAGTGTTAAATTTCAACAGTCTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CCA 90 bp GAGAGACTATGTAACTTGTCCATGGTCACCCAGCTGGTACATGACAGAAATTCAAGTCCATCTAGTTCCTaGTCCCCTCCAGTCTCCACC +
Preference number: 2 (lower is better)
Translates to: ERLCNLSMVTQLVHDRNSSPSSS*SPPVST
Trigger: GGTGGAGACTGGAGGGGACCAGGAACTAGATGGACT...TGAATTTCTGTCATGTACCAGCTGGGTGACCATGGACAAGTTACATAGTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR TCA 90 bp AACAACCCCCAAGTTTATGCTGTCTCCAGTCTTTACGGTACATGGATCAACACATTCCTCCCTTGTTATTaGCAGTCAGCCTTCGTGGGA +
Preference number: 2 (lower is better)
Translates to: NNPQVYAVSSLYGTWINTFLPCY*QSAFVG
Trigger: TCCCACGAAGGCTGACTGTCAATAACAAGGGAGGAA...TGTGTTGATCCATGTACCGTAAAGACTGGAGACAGCATAAACTTGGGGGTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR GCA 90 bp CTTTACTTGAAGCCTAATAGGGGGCTGAGACCTCAAGGACTTCACTGGCCTTTCCTCAGTGTCTTTCTCTaGAAAACAGCGGTAAGAATG +
Preference number: 2 (lower is better)
Translates to: LYLKPNRGLRPQGLHWPFLSVFL*KTAVRM
Trigger: CATTCTTACCGCTGTTTTGCAGAGAAAGACACTGAG...GAAAGGCCAGTGAAGTCCTTGAGGTCTCAGCCCCCTATTAGGCTTCAAGTAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR TCA 90 bp GAGAGACTATGTAACTTGTCCATGGTCACCCAGCTGGTACATGACAGAAATTCAGACCTGTTAATGCACTaGTTCAAGTGGGCGTTTCTC +
Preference number: 2 (lower is better)
Translates to: ERLCNLSMVTQLVHDRNSDLLMH*FKWAFL
Trigger: GAGAAACGCCCACTTGAATCAGTGCATTAACAGGTC...TGAATTTCTGTCATGTACCAGCTGGGTGACCATGGACAAGTTACATAGTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR TCA 90 bp GAGAGACTATGTAACTTGTCCATGGTCACCCAGCTGGTACATGACAGAAATTCATTGTTCATGCCCGTCTaGAGATTTACGAACTCCAGC +
Preference number: 2 (lower is better)
Translates to: ERLCNLSMVTQLVHDRNSLFMPV*RFTNSS
Trigger: GCTGGAGTTCGTAAATCTTCAGACGGGCATGAACAA...TGAATTTCTGTCATGTACCAGCTGGGTGACCATGGACAAGTTACATAGTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR TCA 90 bp GAGAGACTATGTAACTTGTCCATGGTCACCCAGCTGGTACATGACAGAAATTCACAGCTCTTTGGATATTaGATGATGTCCTCGGATCAG +
Preference number: 2 (lower is better)
Translates to: ERLCNLSMVTQLVHDRNSQLFGY*MMSSDQ
Trigger: CTGATCCGAGGACATCATTCAATATCCAAAGAGCTG...TGAATTTCTGTCATGTACCAGCTGGGTGACCATGGACAAGTTACATAGTCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR TCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCAGCCTAATAGGGGGCTaGGACCTCAAGGACTTCACT +
Preference number: 2 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLSLIGG*DLKDFT
Trigger: AGTGAAGTCCTTGAGGTCTCAGCCCCCTATTAGGCT...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR GCA 90 bp GAGAGACTATGTAACTTGTCCATGGTCACCCAGCTGGTACATGACAGAAATTCAGATGGTCTCCAGAAATaGCCATTTCAACTCAGCATC +
Preference number: 2 (lower is better)
Translates to: ERLCNLSMVTQLVHDRNSDGLQK*PFQLSI
Trigger: GATGCTGAGTTGAAATGGGCATTTCTGGAGACCATC...TGAATTTCTGTCATGTACCAGCTGGGTGACCATGGACAAGTTACATAGTCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR GCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCTTCCACCCCTGGGCCTaGCTATTTTCCTCCCTTGTT +
Preference number: 2 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLFHPWA*LFSSLV
Trigger: AACAAGGGAGGAAAATAGGCAGGCCCAGGGGTGGAA...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCATTCGCAAGCAGCTGTaGGCAAAACCAGCGCAGAGT +
Preference number: 2 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLIRKQL*AKPAQS
Trigger: ACTCTGCGCTGGTTTTGCCCACAGCTGCTTGCGAAT...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR TCA 90 bp GAGAGACTATGTAACTTGTCCATGGTCACCCAGCTGGTACATGACAGAAATTCATCTACAGCCTTAAAGTaGGTTACCGGTTTAATGCAG +
Preference number: 2 (lower is better)
Translates to: ERLCNLSMVTQLVHDRNSSTALK*VTGLMQ
Trigger: CTGCATTAAACCGGTAACTCACTTTAAGGCTGTAGA...TGAATTTCTGTCATGTACCAGCTGGGTGACCATGGACAAGTTACATAGTCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR TCA 90 bp AACAACCCCCAAGTTTATGCTGTCTCCAGTCTTTACGGTACATGGATCAACACATCAATAGAGTTGCTGTaGGGATTCACTGAGATCATG +
Preference number: 2 (lower is better)
Translates to: NNPQVYAVSSLYGTWINTSIELL*GFTEIM
Trigger: CATGATCTCAGTGAATCCTCACAGCAACTCTATTGA...TGTGTTGATCCATGTACCGTAAAGACTGGAGACAGCATAAACTTGGGGGTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR GCA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGTTGTGTTTTGTGTTCTaGATTTGCTCATGCTGGCCC +
Preference number: 2 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTLCFVF*ICSCWP
Trigger: GGGCCAGCATGAGCAAATGCAGAACACAAAACACAA...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR CAA 90 bp TGGGGTGGGGCAAGGAAAGTGCTCGTTCCTGAATTATTCATGCTTTaGGCTTTGACTTCAGTTAGTAACATCAATTCTAAGAGAACTGAG +
Preference number: 2 (lower is better)
Translates to: WGGARKVLVPELFML*ALTSVSNINSKRTE
Trigger: CTCAGTTCTCTTAGAATTGATGTTACTAACTGAAGTCAAAGCCAAAAGCATGAATAATTCAGGAACGAGCACTTTCCTTGCCCCACCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR CAA 90 bp TCCATGGGATTTGAGGAACGAGGAGATTGCAAACATGCACTTCAATaGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAG +
Preference number: 2 (lower is better)
Translates to: SMGFEERGDCKHALQ*CFGFSVAHVSRRYQ
Trigger: CTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCAATCTCCTCGTTCCTCAAATCCCATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR TCA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGGAAAGTGCTCGTTCCTaGATTATTCATGCTTTTGGC +
Preference number: 2 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTESARS*IIHAFG
Trigger: GCCAAAAGCATGAATAATTCAGGAACGAGCACTTTC...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CCA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGAGCTTAAAAATACGCTaGACATGCGACAATGGTGCT +
Preference number: 2 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTSLKIR*TCDNGA
Trigger: AGCACCATTGTCGCATGTCCAGCGTATTTTTAAGCT...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCAGCCTTCGTGGGACTTaGTCACAATGTAGGATCAGA +
Preference number: 2 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLSLRGT*SQCRIR
Trigger: TCTGATCCTACATTGTGACCAAGTCCCACGAAGGCT...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR TCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCATAACCCCCATCTATTaGATACATCCTGTGGGCCAA +
Preference number: 2 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLITPIY*IHPVGQ
Trigger: TTGGCCCACAGGATGTATTCAATAGATGGGGGTTAT...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR TCA 90 bp TGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAAACCTGTTTTCCCCTTaGAGTAACACGCTATCTCAG +
Preference number: 2 (lower is better)
Translates to: CTSIVFWLFSGTCFQKISNLFSP*SNTLSQ
Trigger: CTGAGATAGCGTGTTACTTCAAGGGGAAAACAGGTT...TGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR TCA 90 bp TCTACCTACCACAGTGCCTATCTGACTCATGATAGGCAGAGTATAATATATCTGACAATTCCATCTTTCTaGCCTCAGTGTCTTTCTCTG +
Preference number: 2 (lower is better)
Translates to: STYHSAYLTHDRQSIIYLTIPSF*PQCLSL
Trigger: CAGAGAAAGACACTGAGGTCAGAAAGATGGAATTGT...CAGATATATTATACTCTGCCTATCATGAGTCAGATAGGCACTGTGGTAGGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR TCA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGGTTGTCCCTAACTACTaGGTAGTAAATTTAGCCTAC +
Preference number: 2 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTVVPNY*VVNLAY
Trigger: GTAGGCTAAATTTACTACTCAGTAGTTAGGGACAAC...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR TCA 90 bp TGCAAACATGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAGAGTTGCAGGTAGTTTaGCTAAAGTTGGACTCCTTA +
Preference number: 2 (lower is better)
Translates to: CKHALQLCFGFSVAHVSRELQVV*LKLDSL
Trigger: TAAGGAGTCCAACTTTAGTCAAACTACCTGCAACTC...TCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR GCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCGTGGGGCAAGGAAAGTaGTCGTTCCTGAATTATTCA +
Preference number: 2 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLVGQGK*SFLNYS
Trigger: TGAATAATTCAGGAACGAGCACTTTCCTTGCCCCAC...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR GCA 90 bp TGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAAAAATACGCTGGACATaGGACAATGGTGCTGAGTAC +
Preference number: 2 (lower is better)
Translates to: CTSIVFWLFSGTCFQKISKIRWT*DNGAEY
Trigger: GTACTCAGCACCATTGTCGCATGTCCAGCGTATTTT...TGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCGCTAAGTCCTTAGGATaGCTGGCATTTGTAACTCCT +
Preference number: 2 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLAKSLG*LAFVTP
Trigger: AGGAGTTACAAATGCCAGCCATCCTAAGGACTTAGC...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR CAA 90 bp GGGGCAAGGAAAGTGCTCGTTCCTGAATTATTCATGCTTTTGGCTTaGACTTCAGTTAGTAACATCAATTCTAAGAGAACTGAGACAAAC +
Preference number: 2 (lower is better)
Translates to: GARKVLVPELFMLLA*TSVSNINSKRTETN
Trigger: GTTTGTCTCAGTTCTCTTAGAATTGATGTTACTAACTGAAGTCAAAGCCAAAAGCATGAATAATTCAGGAACGAGCACTTTCCTTGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR TCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCTCTTTGGATATTGAATaGTGTCCTCGGATCAGTCCA +
Preference number: 2 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLSLDIE*CPRISP
Trigger: TGGACTGATCCGAGGACATCATTCAATATCCAAAGA...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR TCA 90 bp AGTGATTTGTCTAAGGTTATACAGATAATAGGTGGATATCCCAGATTTCAGACTTTCAGAGGTACCAGATaGGCTAGCTCCAAGGCAAAT +
Preference number: 2 (lower is better)
Translates to: SDLSKVIQIIGGYPRFQTFRGTR*ASSKAN
Trigger: ATTTGCCTTGGAGCTAGCTCATCTGGTACCTCTGAA...AGTCTGAAATCTGGGATATCCACCTATTATCTGTATAACCTTAGACAAATCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR TCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCATGGATCAACACACTTaGTCCATGATGCAAACAGTG +
Preference number: 2 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLMDQHT*SMMQTV
Trigger: CACTGTTTGCATCATGGATCAAGTGTGTTGATCCAT...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR GCA 90 bp TGCAAACATGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGATTAAGCCTGGTGCTCTaGAAATTAATACTTGCAGGT +
Preference number: 2 (lower is better)
Translates to: CKHALQLCFGFSVAHVSRLSLVL*KLILAG
Trigger: ACCTGCAAGTATTAATTTGCAGAGCACCAGGCTTAA...TCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR GCA 90 bp AACAACCCCCAAGTTTATGCTGTCTCCAGTCTTTACGGTACATGGATCAACACACGTATATTCACTCTTTaGCAAGTTGTAGGTACAAAT +
Preference number: 2 (lower is better)
Translates to: NNPQVYAVSSLYGTWINTRIFTL*QVVGTN
Trigger: ATTTGTACCTACAACTTGGCAAAGAGTGAATATACG...TGTGTTGATCCATGTACCGTAAAGACTGGAGACAGCATAAACTTGGGGGTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CCA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGTGTCTATGTAGGCCATaGATCAAGACCATTAACTTA +
Preference number: 2 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTCLCRP*IKTINL
Trigger: TAAGTTAATGGTCTTGATCCATGGCCTACATAGACA...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR CAA 90 bp GATTTGAGGAACGAGGAGATTGCAAACATGCACTTCAATTGTGTTTaGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTT +
Preference number: 2 (lower is better)
Translates to: DLRNEEIANMHFNCV*AFQWHMFPEDISQF
Trigger: AAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCAATCTCCTCGTTCCTCAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR CAA 90 bp CTACATGAATCAAAGAAAGGTTCTAGTTTTGGACATCCATGGGATTaGAGGAACGAGGAGATTGCAAACATGCACTTCAATTGTGTTTTG +
Preference number: 2 (lower is better)
Translates to: LHESKKGSSFGHPWD*RNEEIANMHFNCVL
Trigger: CAAAACACAATTGAAGTGCATGTTTGCAATCTCCTCGTTCCTCAAATCCCATGGATGTCCAAAACTAGAACCTTTCTTTGATTCATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR TCA 90 bp CTGCATTTCTCTAAGAATGGTCTGGAAAGGGATCTGGCAGGAAATAAAGAATATTTACAGAAAGATGACTaGGACTCAGAGTTTGTGACT +
Preference number: 2 (lower is better)
Translates to: LHFSKNGLERDLAGNKEYLQKDD*DSEFVT
Trigger: AGTCACAAACTCTGAGTCTCAGTCATCTTTCTGTAA...ATATTCTTTATTTCCTGCCAGATCCCTTTCCAGACCATTCTTAGAGAAATGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR TCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCATCATGTGTAGATTCTaGAAAATGACCTGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLIMCRF*KMTCGL
Trigger: CAAGCCACAGGTCATTTTTCAGAATCTACACATGAT...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR GCA 90 bp TCTACCTACCACAGTGCCTATCTGACTCATGATAGGCAGAGTATAATATATCTGCACTTTGAGCCACTATaGTATGTTGCCTTATACTTT +
Preference number: 2 (lower is better)
Translates to: STYHSAYLTHDRQSIIYLHFEPL*YVALYF
Trigger: AAAGTATAAGGCAACATAGCATAGTGGCTCAAAGTG...CAGATATATTATACTCTGCCTATCATGAGTCAGATAGGCACTGTGGTAGGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR GCA 90 bp TGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCATCAGCACTAGCACAGTaGTTTTCTGATGTCATAGAT +
Preference number: 2 (lower is better)
Translates to: CTSIVFWLFSGTCFQKISSALAQ*FSDVID
Trigger: ATCTATGACATCAGAAAAGCACTGTGCTAGTGCTGA...TGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CCA 90 bp GCCTTTCTGATACGGCTAGCCTCAATAAATGGAAATGCAATAATTGTGGCTAAATCTACAGGAATCTTGTaGACGCAATTCAAGGATAAC +
Preference number: 2 (lower is better)
Translates to: AFLIRLASINGNAIIVAKSTGIL*TQFKDN
Trigger: GTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGA...TTTAGCCACAATTATTGCATTTCCATTTATTGAGGCTAGCCGTATCAGAAAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR CAA 90 bp GGAAGTGTGATAAAGCAATTGAGACTGTTGAAATTTAACACTACCTaGAGGTCTTATTACACTTGCATGTCACTCCTTAGTGCAAACTCA +
Preference number: 2 (lower is better)
Translates to: GSVIKQLRLLKFNTT*RSYYTCMSLLSANS
Trigger: TGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGACCTCAAGGTAGTGTTAAATTTCAACAGTCTCAATTGCTTTATCACACTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR TCA 90 bp CTGCATTTCTCTAAGAATGGTCTGGAAAGGGATCTGGCAGGAAATAAAGAATATTCATGCTTTTGGCTTTaGCTTCAGTTAGTAACATCA +
Preference number: 2 (lower is better)
Translates to: LHFSKNGLERDLAGNKEYSCFWL*LQLVTS
Trigger: TGATGTTACTAACTGAAGTCAAAGCCAAAAGCATGA...ATATTCTTTATTTCCTGCCAGATCCCTTTCCAGACCATTCTTAGAGAAATGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR GCA 90 bp GCCTTTCTGATACGGCTAGCCTCAATAAATGGAAATGCAATAATTGTGGCTAAAGTGCAAACTCACTTTTaGTTTATAGAAGAGCCCAAT +
Preference number: 2 (lower is better)
Translates to: AFLIRLASINGNAIIVAKVQTHF*FIEEPN
Trigger: ATTGGGCTCTTCTATAAAGCAAAAGTGAGTTTGCAC...TTTAGCCACAATTATTGCATTTCCATTTATTGAGGCTAGCCGTATCAGAAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCTTCTCAAGACTCAGCTaGAAGATTTGTATCATAACT +
Preference number: 2 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLFSRLS*KICIIT
Trigger: AGTTATGATACAAATCTTCCAGCTGAGTCTTGAGAA...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR GCA 90 bp AGTGATTTGTCTAAGGTTATACAGATAATAGGTGGATATCCCAGATTTCAGACTAAAGTCGGAGTAAAGTaGACAGTTACTGTCAAAAAT +
Preference number: 2 (lower is better)
Translates to: SDLSKVIQIIGGYPRFQTKVGVK*TVTVKN
Trigger: ATTTTTGACAGTAACTGTGCACTTTACTCCGACTTT...AGTCTGAAATCTGGGATATCCACCTATTATCTGTATAACCTTAGACAAATCACT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CCA 90 bp TCTTATTACACTTGCATGTCACTCCTTAGTGCAAACTCACTTTTGCTTTATAGATATACAGATAATAGGTaGATATCCCAGATTTCAGAC +
Preference number: 2 (lower is better)
Translates to: SYYTCMSLLSANSLLLYRYTDNR*ISQISD
Trigger: GTCTGAAATCTGGGATATCCACCTATTATCTGTATA...TCTATAAAGCAAAAGTGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR GCA 72 bp GATGCCAACAGCTGGGTCCAATCTCAGCTCGGAATCTaGACTCTGTCTACAGGACTAGCGCTTTGCCCAAGG +
Preference number: 3 (lower is better)
Translates to: DANSWVQSQLGI*TLSTGLALCPR
Trigger: CCTTGGGCAAAGCGCTAGTCCTGTAGACAGAGTGCAGATTCCGAGCTGAGATTGGACCCAGCTGTTGGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR CCA 72 bp TTGTACAAGGCCTCACAGCTAGGAGATGCCAACAGCTaGGTCCAATCTCAGCTCGGAATCTGCACTCTGTCT +
Preference number: 3 (lower is better)
Translates to: LYKASQLGDANS*VQSQLGICTLS
Trigger: AGACAGAGTGCAGATTCCGAGCTGAGATTGGACCCAGCTGTTGGCATCTCCTAGCTGTGAGGCCTTGTACAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CAA 90 bp CTTTACTTGAAGCCTAATAGGGGGCTGAGACCTCAAGGACTTCACTGGCCTTTCTTCTACCAGGAGGCATaGCAGCAGCATAAGCCCTCA +
Preference number: 3 (lower is better)
Translates to: LYLKPNRGLRPQGLHWPFFYQEA*QQHKPS
Trigger: TGAGGGCTTATGCTGCTGCAATGCCTCCTGGTAGAA...GAAAGGCCAGTGAAGTCCTTGAGGTCTCAGCCCCCTATTAGGCTTCAAGTAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 72 bp GGAGCTTCTCAGGTCTTGGCAGAGTTGCAGGTAGTTTaGCTAAAGTTGGACTCCTTAACTGGTGGTGGCTTA +
Preference number: 3 (lower is better)
Translates to: GASQVLAELQVV*LKLDSLTGGGL
Trigger: TAAGCCACCACCAGTTAAGGAGTCCAACTTTAGTCAAACTACCTGCAACTCTGCCAAGACCTGAGAAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR GCA 72 bp GTAGTTCACACCCATGTGGGCTCAGCACTAGCACAGTaGTTTTCTGATGTCATAGATGAACGGATGGCATAC +
Preference number: 3 (lower is better)
Translates to: VVHTHVGSALAQ*FSDVIDERMAY
Trigger: GTATGCCATCCGTTCATCTATGACATCAGAAAAGCACTGTGCTAGTGCTGAGCCCACATGGGTGTGAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CAA 90 bp GAGAGACTATGTAACTTGTCCATGGTCACCCAGCTGGTACATGACAGAAATTCATACAGGACTAGCGCTTaGCCCAAGGAGACCAAAATG +
Preference number: 3 (lower is better)
Translates to: ERLCNLSMVTQLVHDRNSYRTSA*PKETKM
Trigger: CATTTTGGTCTCCTTGGGCAAAGCGCTAGTCCTGTA...TGAATTTCTGTCATGTACCAGCTGGGTGACCATGGACAAGTTACATAGTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CAA 90 bp CTTTACTTGAAGCCTAATAGGGGGCTGAGACCTCAAGGACTTCACTGGCCTTTCTCCTGCCACTGCTGTTaGTCTCAGAATAAATTGTTC +
Preference number: 3 (lower is better)
Translates to: LYLKPNRGLRPQGLHWPFSCHCC*SQNKLF
Trigger: GAACAATTTATTCTGAGACAAACAGCAGTGGCAGGA...GAAAGGCCAGTGAAGTCCTTGAGGTCTCAGCCCCCTATTAGGCTTCAAGTAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR CCA 72 bp CCTCCCTTGTTATTGACAGTCAGCCTTCGTGGGACTTaGTCACAATGTAGGATCAGAAAGCACAGGTTATTG +
Preference number: 3 (lower is better)
Translates to: PPLLLTVSLRGT*SQCRIRKHRLL
Trigger: CAATAACCTGTGCTTTCTGATCCTACATTGTGACCAAGTCCCACGAAGGCTGACTGTCAATAACAAGGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 72 bp AAGCTTAAAAATACGCTGGACATGCGACAATGGTGCTaGGTACTTTGGGGGAAGATCACAACAGTCCTGGTA +
Preference number: 3 (lower is better)
Translates to: KLKNTLDMRQWC*VLWGKITTVLV
Trigger: TACCAGGACTGTTGTGATCTTCCCCCAAAGTACTCAGCACCATTGTCGCATGTCCAGCGTATTTTTAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CAA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGCCCCTAAGTCACACTTaGAGCCACTATGCTATGTTG +
Preference number: 3 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTPLSHT*SHYAML
Trigger: CAACATAGCATAGTGGCTCAAAGTGTGACTTAGGGG...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CAA 90 bp AACAACCCCCAAGTTTATGCTGTCTCCAGTCTTTACGGTACATGGATCAACACAAGAAAGCACAGGTTATaGAGACAGGCCCATACTTTG +
Preference number: 3 (lower is better)
Translates to: NNPQVYAVSSLYGTWINTRKHRL*RQAHTL
Trigger: CAAAGTATGGGCCTGTCTCAATAACCTGTGCTTTCT...TGTGTTGATCCATGTACCGTAAAGACTGGAGACAGCATAAACTTGGGGGTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 72 bp CTTGGTCACAATGTAGGATCAGAAAGCACAGGTTATTaGGACAGGCCCATACTTTGTAACACTCCAGGAGAA +
Preference number: 3 (lower is better)
Translates to: LGHNVGSESTGY*DRPILCNTPGE
Trigger: TTCTCCTGGAGTGTTACAAAGTATGGGCCTGTCTCAATAACCTGTGCTTTCTGATCCTACATTGTGACCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 72 bp TGTCTCCAGTCTTTACGGTACATGGATCAACACACTTaGTCCATGATGCAAACAGTGTTGCCAAGTGACAGA +
Preference number: 3 (lower is better)
Translates to: CLQSLRYMDQHT*SMMQTVLPSDR
Trigger: TCTGTCACTTGGCAACACTGTTTGCATCATGGATCAAGTGTGTTGATCCATGTACCGTAAAGACTGGAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR CCA 72 bp GAAATTGAGACACAGAGAGACTATGTAACTTGTCCATaGTCACCCAGCTGGTACATGACAGAAATTCAGGGA +
Preference number: 3 (lower is better)
Translates to: EIETQRDYVTCP*SPSWYMTEIQG
Trigger: TCCCTGAATTTCTGTCATGTACCAGCTGGGTGACCATGGACAAGTTACATAGTCTCTCTGTGTCTCAATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CAA 90 bp TCTACCTACCACAGTGCCTATCTGACTCATGATAGGCAGAGTATAATATATCTGGCCAAGTGTGCCAGTTaGGGCGTTCATTCATTGTTA +
Preference number: 3 (lower is better)
Translates to: STYHSAYLTHDRQSIIYLAKCAS*GVHSLL
Trigger: TAACAATGAATGAACGCCCAAACTGGCACACTTGGC...CAGATATATTATACTCTGCCTATCATGAGTCAGATAGGCACTGTGGTAGGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CAA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGCAAAAGGGCAGAAGCTaGAAACACAGCTGCTTACTA +
Preference number: 3 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTQKGRS*KHSCLL
Trigger: TAGTAAGCAGCTGTGTTTCAAGCTTCTGCCCTTTTG...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 72 bp AGTCTTTACGGTACATGGATCAACACACTTGATCCATaGTGCAAACAGTGTTGCCAAGTGACAGATTCTCCT +
Preference number: 3 (lower is better)
Translates to: SLYGTWINTLDP*CKQCCQVTDSP
Trigger: AGGAGAATCTGTCACTTGGCAACACTGTTTGCATCATGGATCAAGTGTGTTGATCCATGTACCGTAAAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CAA 90 bp GCCTTTCTGATACGGCTAGCCTCAATAAATGGAAATGCAATAATTGTGGCTAAACTCAGAGTTTGTGACTaGTACAAGGCCTCACAGCTA +
Preference number: 3 (lower is better)
Translates to: AFLIRLASINGNAIIVAKLRVCD*YKASQL
Trigger: TAGCTGTGAGGCCTTGTACAAGTCACAAACTCTGAG...TTTAGCCACAATTATTGCATTTCCATTTATTGAGGCTAGCCGTATCAGAAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CAA 90 bp AACAACCCCCAAGTTTATGCTGTCTCCAGTCTTTACGGTACATGGATCAACACAGTGGGGTGTCTTAGATaGTTTTTCAGAGTTAGTCAT +
Preference number: 3 (lower is better)
Translates to: NNPQVYAVSSLYGTWINTVGCLR*FFRVSH
Trigger: ATGACTAACTCTGAAAAACAATCTAAGACACCCCAC...TGTGTTGATCCATGTACCGTAAAGACTGGAGACAGCATAAACTTGGGGGTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 72 bp TCAAGGATAACATTCTGCAGCTCTTTGGATATTGAATaGTGTCCTCGGATCAGTCCACAAAAGAAACAGGGA +
Preference number: 3 (lower is better)
Translates to: SRITFCSSLDIE*CPRISPQKKQG
Trigger: TCCCTGTTTCTTTTGTGGACTGATCCGAGGACATCATTCAATATCCAAAGAGCTGCAGAATGTTATCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 72 bp AGCAGTGTCACAGCAAAATATTTCAGAGGTACCAGATaGGCTAGCTCCAAGGCAAATGAGGCAATATTATGT +
Preference number: 3 (lower is better)
Translates to: SSVTAKYFRGTR*ASSKANEAILC
Trigger: ACATAATATTGCCTCATTTGCCTTGGAGCTAGCTCATCTGGTACCTCTGAAATATTTTGCTGTGACACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 72 bp ATAGGTGGATATCCCAGATTTCAGACTAGACTTTCTTaGGCTCAAGTTCAAGGAAGGTCCATTCTTCTACAC +
Preference number: 3 (lower is better)
Translates to: IGGYPRFQTRLS*AQVQGRSILLH
Trigger: GTGTAGAAGAATGGACCTTCCTTGAACTTGAGCTCAAGAAAGTCTAGTCTGAAATCTGGGATATCCACCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR CCA 72 bp CATGAATCAAAGAAAGGTTCTAGTTTTGGACATCCATaGGATTTGAGGAACGAGGAGATTGCAAACATGCAC +
Preference number: 3 (lower is better)
Translates to: HESKKGSSFGHP*DLRNEEIANMH
Trigger: GTGCATGTTTGCAATCTCCTCGTTCCTCAAATCCCATGGATGTCCAAAACTAGAACCTTTCTTTGATTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CAA 90 bp TGCAAACATGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGAGTTGCAGGTAGTTaGACTAAAGTTGGACTCCTT +
Preference number: 3 (lower is better)
Translates to: CKHALQLCFGFSVAHVSRRVAGS*TKVGLL
Trigger: AAGGAGTCCAACTTTAGTCAAACTACCTGCAACTCT...TCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CAA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCGCCTATTTTCCTCCCTaGTTATTGACAGTCAGCCTT +
Preference number: 3 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLAYFPP*LLTVSL
Trigger: AAGGCTGACTGTCAATAACAAGGGAGGAAAATAGGC...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CAA 90 bp TCTTATTACACTTGCATGTCACTCCTTAGTGCAAACTCACTTTTGCTTTATAGAATGGTGCTGAGTACTTaGGGGGAAGATCACAACAGT +
Preference number: 3 (lower is better)
Translates to: SYYTCMSLLSANSLLLYRMVLST*GEDHNS
Trigger: ACTGTTGTGATCTTCCCCCAAAGTACTCAGCACCAT...TCTATAAAGCAAAAGTGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 72 bp CAAAGAAAGGTTCTAGTTTTGGACATCCATGGGATTTaGGGAACGAGGAGATTGCAAACATGCACTTCAATT +
Preference number: 3 (lower is better)
Translates to: QRKVLVLDIHGI*GTRRLQTCTSI
Trigger: AATTGAAGTGCATGTTTGCAATCTCCTCGTTCCTCAAATCCCATGGATGTCCAAAACTAGAACCTTTCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR CCA 72 bp ACGAGGAGATTGCAAACATGCACTTCAATTGTGTTTTaGCTTTTCAGTGGCACATGTTTCCAGAAGATATCA +
Preference number: 3 (lower is better)
Translates to: TRRLQTCTSIVF*LFSGTCFQKIS
Trigger: TGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCAATCTCCTCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CAA 90 bp AGTGATTTGTCTAAGGTTATACAGATAATAGGTGGATATCCCAGATTTCAGACTGCAGCTCTTTGGATATaGAATGATGTCCTCGGATCA +
Preference number: 3 (lower is better)
Translates to: SDLSKVIQIIGGYPRFQTAALWI*NDVLGS
Trigger: TGATCCGAGGACATCATTCAATATCCAAAGAGCTGC...AGTCTGAAATCTGGGATATCCACCTATTATCTGTATAACCTTAGACAAATCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CAA 90 bp TCTACCTACCACAGTGCCTATCTGACTCATGATAGGCAGAGTATAATATATCTGTTCATGCTTTTGGCTTaGACTTCAGTTAGTAACATC +
Preference number: 3 (lower is better)
Translates to: STYHSAYLTHDRQSIIYLFMLLA*TSVSNI
Trigger: GATGTTACTAACTGAAGTCAAAGCCAAAAGCATGAA...CAGATATATTATACTCTGCCTATCATGAGTCAGATAGGCACTGTGGTAGGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CAA 90 bp TCTACCTACCACAGTGCCTATCTGACTCATGATAGGCAGAGTATAATATATCTGCCAAGATTTGGAAAATaGAGCTCATCTTTGTCTATC +
Preference number: 3 (lower is better)
Translates to: STYHSAYLTHDRQSIIYLPRFGK*SSSLSI
Trigger: GATAGACAAAGATGAGCTCAATTTTCCAAATCTTGG...CAGATATATTATACTCTGCCTATCATGAGTCAGATAGGCACTGTGGTAGGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 72 bp CAATTCAAGGATAACATTCTGCAGCTCTTTGGATATTaGATGATGTCCTCGGATCAGTCCACAAAAGAAACA +
Preference number: 3 (lower is better)
Translates to: QFKDNILQLFGY*MMSSDQSTKET
Trigger: TGTTTCTTTTGTGGACTGATCCGAGGACATCATTCAATATCCAAAGAGCTGCAGAATGTTATCCTTGAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 72 bp CCAGTTTGGGCGTTCATTCATTGTTATATAATATTATaGTCCTGGGACCATAAGGAGCATATGTCTAGCTCT +
Preference number: 3 (lower is better)
Translates to: PVWAFIHCYIIL*SWDHKEHMSSS
Trigger: AGAGCTAGACATATGCTCCTTATGGTCCCAGGATCATAATATTATATAACAATGAATGAACGCCCAAACTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR GCA 72 bp AAAGAATATATAAAGTATTTTGATGGTCTCCAGAAATaGCCATTTCAACTCAGCATCTGCCGACAGGTCTAC +
Preference number: 3 (lower is better)
Translates to: KEYIKYFDGLQK*PFQLSICRQVY
Trigger: GTAGACCTGTCGGCAGATGCTGAGTTGAAATGGGCATTTCTGGAGACCATCAAAATACTTTATATATTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR CCA 72 bp ACAAACAATACTCATACACATTTGCGACAGTATGTCTaGGTCTTAACCTTTCCTTTTGCTATGAACGCATAC +
Preference number: 3 (lower is better)
Translates to: TNNTHTHLRQYV*VLTFPFAMNAY
Trigger: GTATGCGTTCATAGCAAAAGGAAAGGTTAAGACCCAGACATACTGTCGCAAATGTGTATGAGTATTGTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 72 bp AACAGTATTGTAGAACACCAGAACCTGTTTTCCCCTTaGAGTAACACGCTATCTCAGTATATAAATTACCCA +
Preference number: 3 (lower is better)
Translates to: NSIVEHQNLFSP*SNTLSQYINYP
Trigger: TGGGTAATTTATATACTGAGATAGCGTGTTACTTCAAGGGGAAAACAGGTTCTGGTGTTCTACAATACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 72 bp TCCTACAATAGTACTGAACCCACAGTAAGTACTGAGTaGAAATTAGCATTATTGCAGATTTCTGCTCCTATG +
Preference number: 3 (lower is better)
Translates to: SYNSTEPTVSTE*KLALLQISAPM
Trigger: CATAGGAGCAGAAATCTGCAATAATGCTAATTTTCACTCAGTACTTACTGTGGGTTCAGTACTATTGTAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 72 bp AATCTGCATAATCTTTTTCGGTCTTTTCACCAGCAATaGCAGTATGTTATCTTACTAACGAATCAGCCCATG +
Preference number: 3 (lower is better)
Translates to: NLHNLFRSFHQQ*QYVILLTNQPM
Trigger: CATGGGCTGATTCGTTAGTAAGATAACATACTGTCATTGCTGGTGAAAAGACCGAAAAAGATTATGCAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR-3UTR CAA 90 bp TCTTATTACACTTGCATGTCACTCCTTAGTGCAAACTCACTTTTGCTTTATAGATTATCTACAGGAATCTaGTGGACGCAATTCAAGGAT +
Preference number: 3 (lower is better)
Translates to: SYYTCMSLLSANSLLLYRLSTGI*WTQFKD
Trigger: ATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAA...TCTATAAAGCAAAAGTGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR GCA 72 bp TTGAAATTTAACACTACCTTGAGGTCTTATTACACTTaGATGTCACTCCTTAGTGCAAACTCACTTTTGCTT +
Preference number: 3 (lower is better)
Translates to: LKFNTTLRSYYT*MSLLSANSLLL
Trigger: AAGCAAAAGTGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGACCTCAAGGTAGTGTTAAATTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR TCA 72 bp AAAAGAAATCTTGGAAAGCATTCACCAGCATCTCTCTaGCTTAGTCAGAATATCCTACATGAATCAAAGAAA +
Preference number: 3 (lower is better)
Translates to: KRNLGKHSPASL*LSQNILHESKK
Trigger: TTTCTTTGATTCATGTAGGATATTCTGACTAAGTCAGAGAGATGCTGGTGAATGCTTTCCAAGATTTCTTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp GCTGGACATGCGACAATGGTGCTGAGTACTTTGGGGGAAGATCACAACAGTCCTGTGGTTGGGACCCGGTaGCTGCTGCCCGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: AGHATMVLSTLGEDHNSPVVGTR*LLPAGG
Trigger: GCCGCCTGCGGGCAGCAGCCACCGGGTCCCAACCAC...AGGACTGTTGTGATCTTCCCCCAAAGTACTCAGCACCATTGTCGCATGTCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp CTTTACTTGAAGCCTAATAGGGGGCTGAGACCTCAAGGACTTCACTGGCCTTTCCCCCTCGGGATCTCCTaGGAGCCGCGTTCCCCCGGA +
Preference number: 4 (lower is better)
Translates to: LYLKPNRGLRPQGLHWPFPLGIS*EPRSPG
Trigger: TCCGGGGGAACGCGGCTCCCAGGAGATCCCGAGGGG...GAAAGGCCAGTGAAGTCCTTGAGGTCTCAGCCCCCTATTAGGCTTCAAGTAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp GCTGGACATGCGACAATGGTGCTGAGTACTTTGGGGGAAGATCACAACAGTCCTCTATCGCGGCCCCCTTaGAAGGGCAGCAGCGCGAAG +
Preference number: 4 (lower is better)
Translates to: AGHATMVLSTLGEDHNSPLSRPP*KGSSAK
Trigger: CTTCGCGCTGCTGCCCTTGCAAGGGGGCCGCGATAG...AGGACTGTTGTGATCTTCCCCCAAAGTACTCAGCACCATTGTCGCATGTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp AACAACCCCCAAGTTTATGCTGTCTCCAGTCTTTACGGTACATGGATCAACACAAGTCCGGGAGCCCGCTaGTGCTGCGGCGCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: NNPQVYAVSSLYGTWINTSPGAR*CCGAAR
Trigger: CCTTGCGGCGCCGCAGCACCAGCGGGCTCCCGGACT...TGTGTTGATCCATGTACCGTAAAGACTGGAGACAGCATAAACTTGGGGGTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp AACAACCCCCAAGTTTATGCTGTCTCCAGTCTTTACGGTACATGGATCAACACACTCCAGCCGCAGGGGTaGCGAGGGGGAGGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: NNPQVYAVSSLYGTWINTLQPQG*RGGGGL
Trigger: AAGGCCGCCTCCCCCTCGCCACCCCTGCGGCTGGAG...TGTGTTGATCCATGTACCGTAAAGACTGGAGACAGCATAAACTTGGGGGTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp CTTTACTTGAAGCCTAATAGGGGGCTGAGACCTCAAGGACTTCACTGGCCTTTCTACTGCTGTTGGCCGTaGTTGGGACCCGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LYLKPNRGLRPQGLHWPFYCCWP*LGPGGC
Trigger: GCAGCCACCGGGTCCCAACCACGGCCAACAGCAGTA...GAAAGGCCAGTGAAGTCCTTGAGGTCTCAGCCCCCTATTAGGCTTCAAGTAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp GCTGGACATGCGACAATGGTGCTGAGTACTTTGGGGGAAGATCACAACAGTCCTCCTGGAGCCCTAGGGTaGCTCCTGGACCGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: AGHATMVLSTLGEDHNSPPGALG*LLDRFL
Trigger: CAAAAACCGGTCCAGGAGCCACCCTAGGGCTCCAGG...AGGACTGTTGTGATCTTCCCCCAAAGTACTCAGCACCATTGTCGCATGTCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp AACAACCCCCAAGTTTATGCTGTCTCCAGTCTTTACGGTACATGGATCAACACAGAGCTGGCCGTGCTCTaGCGCCCCCAGCTCTCGGGT +
Preference number: 4 (lower is better)
Translates to: NNPQVYAVSSLYGTWINTELAVL*RPQLSG
Trigger: ACCCGAGAGCTGGGGGCGCCAGAGCACGGCCAGCTC...TGTGTTGATCCATGTACCGTAAAGACTGGAGACAGCATAAACTTGGGGGTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp AACAACCCCCAAGTTTATGCTGTCTCCAGTCTTTACGGTACATGGATCAACACAAGGGGGAGGCGGCCTTaGCCAGAGGGCTGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: NNPQVYAVSSLYGTWINTRGRRP*PEGWSP
Trigger: CGGACTCCAGCCCTCTGGCCAAGGCCGCCTCCCCCT...TGTGTTGATCCATGTACCGTAAAGACTGGAGACAGCATAAACTTGGGGGTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp GAGAGACTATGTAACTTGTCCATGGTCACCCAGCTGGTACATGACAGAAATTCACGCGCCTCTTTTGTGTaGCTGCGGCGCGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: ERLCNLSMVTQLVHDRNSRASFV*LRRAGL
Trigger: GAGCCCGGCGCGCCGCAGCCACACAAAAGAGGCGCG...TGAATTTCTGTCATGTACCAGCTGGGTGACCATGGACAAGTTACATAGTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp CTTTACTTGAAGCCTAATAGGGGGCTGAGACCTCAAGGACTTCACTGGCCTTTCGGCGAGCTCCTGGAGTaGAGGACTAGCCTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: LYLKPNRGLRPQGLHWPFGELLE*RTSLWD
Trigger: ATCCCAGAGGCTAGTCCTGCACTCCAGGAGCTCGCC...GAAAGGCCAGTGAAGTCCTTGAGGTCTCAGCCCCCTATTAGGCTTCAAGTAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp AAATCCTTGGAGTTATCTACAGGAATCTTGTGGACGCAATTCAAGGATAACATTCTCGGCGCCGCGGGGTaGGGAGGCCACGAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: KSLELSTGILWTQFKDNILGAAG*GGHEPL
Trigger: CAAGGGCTCGTGGCCTCCTCACCCCGCGGCGCCGAG...AATGTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAACTCCAAGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp GCCTTTCTGATACGGCTAGCCTCAATAAATGGAAATGCAATAATTGTGGCTAAAGGACCCGGTGGCTGCTaGCCGCAGGCGGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AFLIRLASINGNAIIVAKGPGGC*PQAAAA
Trigger: AGCAGCTGCCGCCTGCGGGCAGCAGCCACCGGGTCC...TTTAGCCACAATTATTGCATTTCCATTTATTGAGGCTAGCCGTATCAGAAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp CTTTACTTGAAGCCTAATAGGGGGCTGAGACCTCAAGGACTTCACTGGCCTTTCTGCTGCCACTGCTACTaGTGTTGGCCGTGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LYLKPNRGLRPQGLHWPFCCHCY*CWPWLG
Trigger: TCCCAACCACGGCCAACAGCAGTAGCAGTGGCAGCA...GAAAGGCCAGTGAAGTCCTTGAGGTCTCAGCCCCCTATTAGGCTTCAAGTAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp GCTGGACATGCGACAATGGTGCTGAGTACTTTGGGGGAAGATCACAACAGTCCTGGTTTTTGCTGCCACTaGTACTGCTGTTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: AGHATMVLSTLGEDHNSPGFCCH*YCCWPW
Trigger: CCACGGCCAACAGCAGTAGCAGTGGCAGCAAAAACC...AGGACTGTTGTGATCTTCCCCCAAAGTACTCAGCACCATTGTCGCATGTCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp TGCAAACATGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGACCCTCCGGCGAGCTCTaGTCCGCACCCAGAACGGGG +
Preference number: 4 (lower is better)
Translates to: CKHALQLCFGFSVAHVSRPSGEL*SAPRTG
Trigger: CCCCGTTCTGGGTGCGGAGCAGAGCTCGCCGGAGGG...TCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGGCTGTTGGCCGTGGTTaGGACCCGGTGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTAVGRG*DPVAAA
Trigger: GGCAGCAGCCACCGGGTCCCAACCACGGCCAACAGC...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp TGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCACTGGAGGCGTGCTCCTaGGCGCGCCCGCGGAACTGG +
Preference number: 4 (lower is better)
Translates to: CTSIVFWLFSGTCFQKISLEACS*ARPRNW
Trigger: CCAGTTCCGCGGGCGCGCCCAGGAGCACGCCTCCAG...TGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCGGAGGCGGCTCGTGCTaGAGGCGTGCTCCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLGGGSC*RRAPGR
Trigger: GCGCCCAGGAGCACGCCTCCAGCACGAGCCGCCTCC...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp TCTACCTACCACAGTGCCTATCTGACTCATGATAGGCAGAGTATAATATATCTGGAGGCCACGAGCCCTTaGCCAGCATCGCCGCCGCTC +
Preference number: 4 (lower is better)
Translates to: STYHSAYLTHDRQSIIYLEATSP*PASPPL
Trigger: GAGCGGCGGCGATGCTGGCCAAGGGCTCGTGGCCTC...CAGATATATTATACTCTGCCTATCATGAGTCAGATAGGCACTGTGGTAGGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGTTGCTCGGCCGTGGGTaGCTCCTGGCTGGCACCCTC +
Preference number: 4 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTLLGRG*LLAGTL
Trigger: GAGGGTGCCAGCCAGGAGCCACCCACGGCCGAGCAA...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp AACAACCCCCAAGTTTATGCTGTCTCCAGTCTTTACGGTACATGGATCAACACAGGCTGTGCACGTCGATaGCGGTGGAGTAGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: NNPQVYAVSSLYGTWINTGCARR*RWSRGP
Trigger: GGGACCTCTACTCCACCGTCATCGACGTGCACAGCC...TGTGTTGATCCATGTACCGTAAAGACTGGAGACAGCATAAACTTGGGGGTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp AAATCCTTGGAGTTATCTACAGGAATCTTGTGGACGCAATTCAAGGATAACATTGCGGCTGTTGCTGTCTaGGCCGCGGGCCCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: KSLELSTGILWTQFKDNIAAVAV*AAGPRG
Trigger: GCCTCTGGGGCCCGCGGCTCAGACAGCAACAGCCGC...AATGTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAACTCCAAGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp GCTGGACATGCGACAATGGTGCTGAGTACTTTGGGGGAAGATCACAACAGTCCTAGCCTAATAGGGGGCTaGGACCTCAAGGACTTCACT +
Preference number: 4 (lower is better)
Translates to: AGHATMVLSTLGEDHNSPSLIGG*DLKDFT
Trigger: AGTGAAGTCCTTGAGGTCTCAGCCCCCTATTAGGCT...AGGACTGTTGTGATCTTCCCCCAAAGTACTCAGCACCATTGTCGCATGTCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp CTTTACTTGAAGCCTAATAGGGGGCTGAGACCTCAAGGACTTCACTGGCCTTTCGGGCGGAGTGGATCCTaGTTTCTGGCGGAAATCCTT +
Preference number: 4 (lower is better)
Translates to: LYLKPNRGLRPQGLHWPFGRSGS*FLAEIL
Trigger: AAGGATTTCCGCCAGAAAGCAGGATCCACTCCGCCC...GAAAGGCCAGTGAAGTCCTTGAGGTCTCAGCCCCCTATTAGGCTTCAAGTAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp TGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCATTGGGACCCGGTGGCTaGTGCCCGCAGGCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: CTSIVFWLFSGTCFQKISLGPGG*CPQAAA
Trigger: AGCTGCCGCCTGCGGGCAGCAGCCACCGGGTCCCAA...TGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp AAATCCTTGGAGTTATCTACAGGAATCTTGTGGACGCAATTCAAGGATAACATTCGGGGAGGCGGCTCGTaGTGGAGGCGTGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KSLELSTGILWTQFKDNIRGGGS*WRRAPG
Trigger: CCCAGGAGCACGCCTCCAGCACGAGCCGCCTCCCCG...AATGTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAACTCCAAGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp AAATCCTTGGAGTTATCTACAGGAATCTTGTGGACGCAATTCAAGGATAACATTTCCCCCGGAGGCCTCTaGCAGCTGCAGCTCGCGCCC +
Preference number: 4 (lower is better)
Translates to: KSLELSTGILWTQFKDNISPGGL*QLQLAP
Trigger: GGGCGCGAGCTGCAGCTGGCAGAGGCCTCCGGGGGA...AATGTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAACTCCAAGGATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGCGCGGAGGTTGGTCATaGTCAGGTCGAGCTCGCCCC +
Preference number: 4 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTRGGWS*SGRARP
Trigger: GGGGCGAGCTCGACCTGAGCATGACCAACCTCCGCG...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp AAATCCTTGGAGTTATCTACAGGAATCTTGTGGACGCAATTCAAGGATAACATTCCGACTCGGTGGAGGTaGCGGCCTCCCGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: KSLELSTGILWTQFKDNIPTRWR*RPPAGV
Trigger: CACCCCTGCGGGAGGCCGGCACCTCCACCGAGTCGG...AATGTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAACTCCAAGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp GCTGGACATGCGACAATGGTGCTGAGTACTTTGGGGGAAGATCACAACAGTCCTTTCCACCCCTGGGCCTaGCTATTTTCCTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: AGHATMVLSTLGEDHNSPFHPWA*LFSSLV
Trigger: AACAAGGGAGGAAAATAGGCAGGCCCAGGGGTGGAA...AGGACTGTTGTGATCTTCCCCCAAAGTACTCAGCACCATTGTCGCATGTCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp TGCAAACATGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGTCCACGAAGGAGCTaGCCGTGCTCTGGCGCCCCC +
Preference number: 4 (lower is better)
Translates to: CKHALQLCFGFSVAHVSRSPRRS*PCSGAP
Trigger: GGGGGCGCCAGAGCACGGCCAGCTCCTTCGTGGACT...TCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp TGCAAACATGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGATGGGTGGCTCCTGGCTaGCACCCTCCGGCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: CKHALQLCFGFSVAHVSRWVAPG*HPPASS
Trigger: AGAGCTCGCCGGAGGGTGCCAGCCAGGAGCCACCCA...TCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp AAATCCTTGGAGTTATCTACAGGAATCTTGTGGACGCAATTCAAGGATAACATTGCCGTGGGTGGCTCCTaGCTGGCACCCTCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: KSLELSTGILWTQFKDNIAVGGS*LAPSGE
Trigger: CTCGCCGGAGGGTGCCAGCCAGGAGCCACCCACGGC...AATGTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAACTCCAAGGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp GAGAGACTATGTAACTTGTCCATGGTCACCCAGCTGGTACATGACAGAAATTCATCCCACAGAGGGCGATaGGCCCTGAGATGGAGCACA +
Preference number: 4 (lower is better)
Translates to: ERLCNLSMVTQLVHDRNSSHRGR*ALRWST
Trigger: TGTGCTCCATCTCAGGGCTCATCGCCCTCTGTGGGA...TGAATTTCTGTCATGTACCAGCTGGGTGACCATGGACAAGTTACATAGTCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp TGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCATGCCTCTGCACCGGCTaGGGTTGCTCGGCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: CTSIVFWLFSGTCFQKISCLCTG*GCSAVG
Trigger: ACCCACGGCCGAGCAACCTCAGCCGGTGCAGAGGCA...TGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp CTTTACTTGAAGCCTAATAGGGGGCTGAGACCTCAAGGACTTCACTGGCCTTTCGTGGAGGACCGCGTTTaGGCAGATGAAGAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: LYLKPNRGLRPQGLHWPFVEDRV*ADEEED
Trigger: ATCTTCCTCTTCATCTGCGCAAACGCGGTCCTCCAC...GAAAGGCCAGTGAAGTCCTTGAGGTCTCAGCCCCCTATTAGGCTTCAAGTAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp AGTGATTTGTCTAAGGTTATACAGATAATAGGTGGATATCCCAGATTTCAGACTGCAAGGCCGCGTACCTaGCGGTCCTGGGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: SDLSKVIQIIGGYPRFQTARPRT*RSWAGG
Trigger: GCCGCCTGCCCAGGACCGGCAGGTACGCGGCCTTGC...AGTCTGAAATCTGGGATATCCACCTATTATCTGTATAACCTTAGACAAATCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp GCTGGACATGCGACAATGGTGCTGAGTACTTTGGGGGAAGATCACAACAGTCCTTCTACCAGGAGGCATTaGAGCAGCATAAGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: AGHATMVLSTLGEDHNSPSTRRH*SSISPH
Trigger: ATGAGGGCTTATGCTGCTGCAATGCCTCCTGGTAGA...AGGACTGTTGTGATCTTCCCCCAAAGTACTCAGCACCATTGTCGCATGTCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp TGCAAACATGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGAAGCCCACGGACGTaGAGGAGGAGGACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: CKHALQLCFGFSVAHVSRRSPRT*RRRTGR
Trigger: CCTCCCCGTCCTCCTCCTCCACGTCCGTGGGCTTCT...TCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp CTGCATTTCTCTAAGAATGGTCTGGAAAGGGATCTGGCAGGAAATAAAGAATATCCAAGACCGACTCGGTaGAGGTGCCGGCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: LHFSKNGLERDLAGNKEYPRPTR*RCRPPA
Trigger: TGCGGGAGGCCGGCACCTCCACCGAGTCGGTCTTGG...ATATTCTTTATTTCCTGCCAGATCCCTTTCCAGACCATTCTTAGAGAAATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCTCGGGGCGGCCGGACTaGCGGCTGTTGCTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLSGRPD*RLLLSE
Trigger: CTCAGACAGCAACAGCCGCCAGTCCGGCCGCCCCGA...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp GCTGGACATGCGACAATGGTGCTGAGTACTTTGGGGGAAGATCACAACAGTCCTGACCTGTTAATGCACTaGTTCAAGTGGGCGTTTCTC +
Preference number: 4 (lower is better)
Translates to: AGHATMVLSTLGEDHNSPDLLMH*FKWAFL
Trigger: GAGAAACGCCCACTTGAATCAGTGCATTAACAGGTC...AGGACTGTTGTGATCTTCCCCCAAAGTACTCAGCACCATTGTCGCATGTCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp CTGCATTTCTCTAAGAATGGTCTGGAAAGGGATCTGGCAGGAAATAAAGAATATGCGCATGCTGCCCTCTaGGCCGCGGAGGTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: LHFSKNGLERDLAGNKEYAHAAL*AAEVGH
Trigger: ATGACCAACCTCCGCGGCGCAGAGGGCAGCATGCGC...ATATTCTTTATTTCCTGCCAGATCCCTTTCCAGACCATTCTTAGAGAAATGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp AGTGATTTGTCTAAGGTTATACAGATAATAGGTGGATATCCCAGATTTCAGACTCCTCTTTTGTGTGGCTaGGGCGCGCCGGGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: SDLSKVIQIIGGYPRFQTPLLCG*GAPGSA
Trigger: GGCGGAGCCCGGCGCGCCGCAGCCACACAAAAGAGG...AGTCTGAAATCTGGGATATCCACCTATTATCTGTATAACCTTAGACAAATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGCAACTGCCCACTAGCTaGTCAGCCACCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTQLPTS*SATSSC
Trigger: GCAGGAGGAGGTGGCTGAGCAGCTAGTGGGCAGTTG...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp TCTACCTACCACAGTGCCTATCTGACTCATGATAGGCAGAGTATAATATATCTGGGAGTTGACACCCCCTaGAGCCCTAGGGTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: STYHSAYLTHDRQSIIYLGVDTP*SPRVAP
Trigger: AGGAGCCACCCTAGGGCTCCAGGGGGTGTCAACTCC...CAGATATATTATACTCTGCCTATCATGAGTCAGATAGGCACTGTGGTAGGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp AAATCCTTGGAGTTATCTACAGGAATCTTGTGGACGCAATTCAAGGATAACATTCGGCCGCCAGGTCTTTaGCGCGGAGGCTGTGCACGT +
Preference number: 4 (lower is better)
Translates to: KSLELSTGILWTQFKDNIRPPGL*RGGCAR
Trigger: ACGTGCACAGCCTCCGCGCCAAAGACCTGGCGGCCG...AATGTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAACTCCAAGGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp AAATCCTTGGAGTTATCTACAGGAATCTTGTGGACGCAATTCAAGGATAACATTCCTTGGCCAGAGGGCTaGAGTCCGGGTCCGCACTCC +
Preference number: 4 (lower is better)
Translates to: KSLELSTGILWTQFKDNIPWPEG*SPGPHS
Trigger: GGAGTGCGGACCCGGACTCCAGCCCTCTGGCCAAGG...AATGTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAACTCCAAGGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp AAATCCTTGGAGTTATCTACAGGAATCTTGTGGACGCAATTCAAGGATAACATTGAGGTTGCTCGGCCGTaGGTGGCTCCTGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: KSLELSTGILWTQFKDNIEVARP*VAPGWH
Trigger: GTGCCAGCCAGGAGCCACCCACGGCCGAGCAACCTC...AATGTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAACTCCAAGGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR CAA 72 bp AAATACGCTGGACATGCGACAATGGTGCTGAGTACTTaGGGGGAAGATCACAACAGTCCTGGTAGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: KYAGHATMVLST*GEDHNSPGSSV
Trigger: GACACTGCTACCAGGACTGTTGTGATCTTCCCCCAAAGTACTCAGCACCATTGTCGCATGTCCAGCGTATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp CTTTACTTGAAGCCTAATAGGGGGCTGAGACCTCAAGGACTTCACTGGCCTTTCACCACAGTGCCTATCTaGCTCATGATAGGCAGAGTA +
Preference number: 4 (lower is better)
Translates to: LYLKPNRGLRPQGLHWPFTTVPI*LMIGRV
Trigger: TACTCTGCCTATCATGAGTCAGATAGGCACTGTGGT...GAAAGGCCAGTGAAGTCCTTGAGGTCTCAGCCCCCTATTAGGCTTCAAGTAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCTTGGCGCGGAGGCTGTaGACGTCGATGACGGTGGAG +
Preference number: 4 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLLARRL*TSMTVE
Trigger: CTCCACCGTCATCGACGTGCACAGCCTCCGCGCCAA...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp AGTGATTTGTCTAAGGTTATACAGATAATAGGTGGATATCCCAGATTTCAGACTCGAAGGAGCTGGCCGTaGTCTGGCGCCCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SDLSKVIQIIGGYPRFQTRRSWP*SGAPSS
Trigger: AGAGCTGGGGGCGCCAGAGCACGGCCAGCTCCTTCG...AGTCTGAAATCTGGGATATCCACCTATTATCTGTATAACCTTAGACAAATCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp CTGCATTTCTCTAAGAATGGTCTGGAAAGGGATCTGGCAGGAAATAAAGAATATAGGGAGGGCGCCAACTaGCCACTAGCTGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LHFSKNGLERDLAGNKEYREGAN*PLAAQP
Trigger: TGGCTGAGCAGCTAGTGGGCAGTTGGCGCCCTCCCT...ATATTCTTTATTTCCTGCCAGATCCCTTTCCAGACCATTCTTAGAGAAATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp AAATCCTTGGAGTTATCTACAGGAATCTTGTGGACGCAATTCAAGGATAACATTCGCCGGTGGCGATCATaGCGAGCTCCTGGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: KSLELSTGILWTQFKDNIRRWRS*RAPGVQ
Trigger: CTGCACTCCAGGAGCTCGCCATGATCGCCACCGGCG...AATGTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAACTCCAAGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp AGTGATTTGTCTAAGGTTATACAGATAATAGGTGGATATCCCAGATTTCAGACTTGGTCCCGGTGGCCTTaGGCCAGTAGCCCACCACCG +
Preference number: 4 (lower is better)
Translates to: SDLSKVIQIIGGYPRFQTWSRWP*ASSPPP
Trigger: CGGTGGTGGGCTACTGGCCCAAGGCCACCGGGACCA...AGTCTGAAATCTGGGATATCCACCTATTATCTGTATAACCTTAGACAAATCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCCTGCGCCGCGGAGGTTaGTCATGCTCAGGTCGAGCT +
Preference number: 4 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLLRRGG*SCSGRA
Trigger: AGCTCGACCTGAGCATGACCAACCTCCGCGGCGCAG...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp AAATCCTTGGAGTTATCTACAGGAATCTTGTGGACGCAATTCAAGGATAACATTGATGGGTCATCCGACTaGGAGCTCCCGGAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: KSLELSTGILWTQFKDNIDGSSD*ELPESR
Trigger: GCGGGACTCCGGGAGCTCCCAGTCGGATGACCCATC...AATGTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAACTCCAAGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR CAA 72 bp AGGAGCTTCTCAGGTCTTGGCAGAGTTGCAGGTAGTTaGACTAAAGTTGGACTCCTTAACTGGTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: RSFSGLGRVAGS*TKVGLLNWWWL
Trigger: AAGCCACCACCAGTTAAGGAGTCCAACTTTAGTCAAACTACCTGCAACTCTGCCAAGACCTGAGAAGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp GCTGGACATGCGACAATGGTGCTGAGTACTTTGGGGGAAGATCACAACAGTCCTTCTTTGGATATTGAATaGTGTCCTCGGATCAGTCCA +
Preference number: 4 (lower is better)
Translates to: AGHATMVLSTLGEDHNSPSLDIE*CPRISP
Trigger: TGGACTGATCCGAGGACATCATTCAATATCCAAAGA...AGGACTGTTGTGATCTTCCCCCAAAGTACTCAGCACCATTGTCGCATGTCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp AACAACCCCCAAGTTTATGCTGTCTCCAGTCTTTACGGTACATGGATCAACACATCCTGGACCGGTTTTTaGTGCCACTGCTACTGCTGT +
Preference number: 4 (lower is better)
Translates to: NNPQVYAVSSLYGTWINTSWTGF*CHCYCC
Trigger: ACAGCAGTAGCAGTGGCAGCAAAAACCGGTCCAGGA...TGTGTTGATCCATGTACCGTAAAGACTGGAGACAGCATAAACTTGGGGGTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGGGTAGCCAGAGAAGATaGGGAAGAAGAAGCCCACGG +
Preference number: 4 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTGSQRR*GRRSPR
Trigger: CCGTGGGCTTCTTCTTCCGCATCTTCTCTGGCTACC...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp AGTGATTTGTCTAAGGTTATACAGATAATAGGTGGATATCCCAGATTTCAGACTTCAGCCACCTCCTCCTaGCAGGGAGACCGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SDLSKVIQIIGGYPRFQTSATSS*QGDRGR
Trigger: CCTCCCTCGGTCTCCCTGGCAGGAGGAGGTGGCTGA...AGTCTGAAATCTGGGATATCCACCTATTATCTGTATAACCTTAGACAAATCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp CTTTACTTGAAGCCTAATAGGGGGCTGAGACCTCAAGGACTTCACTGGCCTTTCGTGGGGCAAGGAAAGTaGTCGTTCCTGAATTATTCA +
Preference number: 4 (lower is better)
Translates to: LYLKPNRGLRPQGLHWPFVGQGK*SFLNYS
Trigger: TGAATAATTCAGGAACGAGCACTTTCCTTGCCCCAC...GAAAGGCCAGTGAAGTCCTTGAGGTCTCAGCCCCCTATTAGGCTTCAAGTAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp CTTTACTTGAAGCCTAATAGGGGGCTGAGACCTCAAGGACTTCACTGGCCTTTCAAAATACGCTGGACATaGGACAATGGTGCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: LYLKPNRGLRPQGLHWPFKIRWT*DNGAEY
Trigger: GTACTCAGCACCATTGTCGCATGTCCAGCGTATTTT...GAAAGGCCAGTGAAGTCCTTGAGGTCTCAGCCCCCTATTAGGCTTCAAGTAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp GCTGGACATGCGACAATGGTGCTGAGTACTTTGGGGGAAGATCACAACAGTCCTCTCAGTGTCTTTCTCTaGAAAACAGCGGTAAGAATG +
Preference number: 4 (lower is better)
Translates to: AGHATMVLSTLGEDHNSPLSVFL*KTAVRM
Trigger: CATTCTTACCGCTGTTTTGCAGAGAAAGACACTGAG...AGGACTGTTGTGATCTTCCCCCAAAGTACTCAGCACCATTGTCGCATGTCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp CTGCATTTCTCTAAGAATGGTCTGGAAAGGGATCTGGCAGGAAATAAAGAATATCTTGGGTATCTGGCTTaGGGGGCGGAGTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: LHFSKNGLERDLAGNKEYLGYLA*GAEWIL
Trigger: CAGGATCCACTCCGCCCCCCAAGCCAGATACCCAAG...ATATTCTTTATTTCCTGCCAGATCCCTTTCCAGACCATTCTTAGAGAAATGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp GCCTTTCTGATACGGCTAGCCTCAATAAATGGAAATGCAATAATTGTGGCTAAATTGTCCCGGTTCTCGTaGAGGACCGCGTTTGCGCAG +
Preference number: 4 (lower is better)
Translates to: AFLIRLASINGNAIIVAKLSRFS*RTAFAQ
Trigger: CTGCGCAAACGCGGTCCTCCACGAGAACCGGGACAA...TTTAGCCACAATTATTGCATTTCCATTTATTGAGGCTAGCCGTATCAGAAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp AGTGATTTGTCTAAGGTTATACAGATAATAGGTGGATATCCCAGATTTCAGACTTCCCCGCCGGCGCTGTaGCGGGAGCCATTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: SDLSKVIQIIGGYPRFQTSPPAL*REPFPR
Trigger: TCTTGGAAATGGCTCCCGCCACAGCGCCGGCGGGGA...AGTCTGAAATCTGGGATATCCACCTATTATCTGTATAACCTTAGACAAATCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCCCGCGTTTGCGCAGATaGAGAGGAAGATGCCGATGC +
Preference number: 4 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLPRLRR*RGRCRC
Trigger: GCATCGGCATCTTCCTCTTCATCTGCGCAAACGCGG...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp CTTTACTTGAAGCCTAATAGGGGGCTGAGACCTCAAGGACTTCACTGGCCTTTCGAGTTGCAGGTAGTTTaGCTAAAGTTGGACTCCTTA +
Preference number: 4 (lower is better)
Translates to: LYLKPNRGLRPQGLHWPFELQVV*LKLDSL
Trigger: TAAGGAGTCCAACTTTAGTCAAACTACCTGCAACTC...GAAAGGCCAGTGAAGTCCTTGAGGTCTCAGCCCCCTATTAGGCTTCAAGTAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp CTTTACTTGAAGCCTAATAGGGGGCTGAGACCTCAAGGACTTCACTGGCCTTTCAACACACTTGATCCATaGTGCAAACAGTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LYLKPNRGLRPQGLHWPFNTLDP*CKQCCQ
Trigger: TTGGCAACACTGTTTGCATCATGGATCAAGTGTGTT...GAAAGGCCAGTGAAGTCCTTGAGGTCTCAGCCCCCTATTAGGCTTCAAGTAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp TGCAAACATGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGACGTTTGACCAGCTACTaGGTCCAAGACCGACTCGGT +
Preference number: 4 (lower is better)
Translates to: CKHALQLCFGFSVAHVSRRLTSY*VQDRLG
Trigger: ACCGAGTCGGTCTTGGACGCAGTAGCTGGTCAAACG...TCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp TGCAAACATGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAATCATGGCGAGCTCCTaGAGTGCAGGACTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: CKHALQLCFGFSVAHVSRIMASS*SAGLAS
Trigger: AGAGGCTAGTCCTGCACTCCAGGAGCTCGCCATGAT...TCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp TCTTATTACACTTGCATGTCACTCCTTAGTGCAAACTCACTTTTGCTTTATAGATTAGCAGGCCGCCGGTaGCGATCATGGCGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SYYTCMSLLSANSLLLYRLAGRR*RSWRAP
Trigger: AGGAGCTCGCCATGATCGCCACCGGCGGCCTGCTAA...TCTATAAAGCAAAAGTGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp TCTTATTACACTTGCATGTCACTCCTTAGTGCAAACTCACTTTTGCTTTATAGAAGCCCACCACCGCCATaGCTATGCCCACCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SYYTCMSLLSANSLLLYRSPPPP*LCPPAA
Trigger: TGCTGCTGGTGGGCATAGCCATGGCGGTGGTGGGCT...TCTATAAAGCAAAAGTGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp AAATCCTTGGAGTTATCTACAGGAATCTTGTGGACGCAATTCAAGGATAACATTCACTGCTACTGCTGTTaGCCGTGGTTGGGACCCGGT +
Preference number: 4 (lower is better)
Translates to: KSLELSTGILWTQFKDNIHCYCC*PWLGPG
Trigger: ACCGGGTCCCAACCACGGCCAACAGCAGTAGCAGTG...AATGTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAACTCCAAGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCTGCAGGACTAGCCTCTaGGATGGAGGCTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLCRTSL*DGGLHR
Trigger: CCTGTGCAAGCCTCCATCCCAGAGGCTAGTCCTGCA...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGATTCGCAAGCAGCTGTaGGCAAAACCAGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTIRKQL*AKPAQS
Trigger: ACTCTGCGCTGGTTTTGCCCACAGCTGCTTGCGAAT...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCTCATGCTGGCCCCACTaGCCAACACACCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLSCWPH*PTHLSQ
Trigger: CTGGGAAAGGTGTGTTGGCCAGTGGGGCCAGCATGA...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp TCTTATTACACTTGCATGTCACTCCTTAGTGCAAACTCACTTTTGCTTTATAGAGGGGCCCGAAGACCTTaGGCTTGTCAGAGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SYYTCMSLLSANSLLLYRGARRP*ACQSAG
Trigger: ACCTGCACTCTGACAAGCTCAAGGTCTTCGGGCCCC...TCTATAAAGCAAAAGTGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp AACAACCCCCAAGTTTATGCTGTCTCCAGTCTTTACGGTACATGGATCAACACATCTACCCCTATGGCATaGGACCTGGAAATCATGATG +
Preference number: 4 (lower is better)
Translates to: NNPQVYAVSSLYGTWINTSTPMA*DLEIMM
Trigger: CATCATGATTTCCAGGTCTCATGCCATAGGGGTAGA...TGTGTTGATCCATGTACCGTAAAGACTGGAGACAGCATAAACTTGGGGGTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCTCTTGCGCCTCTTCTTaGCTTTCCGCTTGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLSCASS*LSACAW
Trigger: CCAAGCGCAAGCGGAAAGCCAAGAAGAGGCGCAAGA...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp GCCTTTCTGATACGGCTAGCCTCAATAAATGGAAATGCAATAATTGTGGCTAAAAGCCCTTATTGCTGCTaGATGGGTCATCCGACTGGG +
Preference number: 4 (lower is better)
Translates to: AFLIRLASINGNAIIVAKSPYCC*MGHPTG
Trigger: CCCAGTCGGATGACCCATCCAGCAGCAATAAGGGCT...TTTAGCCACAATTATTGCATTTCCATTTATTGAGGCTAGCCGTATCAGAAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp CTTTACTTGAAGCCTAATAGGGGGCTGAGACCTCAAGGACTTCACTGGCCTTTCTCTACAGGAATCTTGTaGACGCAATTCAAGGATAAC +
Preference number: 4 (lower is better)
Translates to: LYLKPNRGLRPQGLHWPFSTGIL*TQFKDN
Trigger: GTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGA...GAAAGGCCAGTGAAGTCCTTGAGGTCTCAGCCCCCTATTAGGCTTCAAGTAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp GAGAGACTATGTAACTTGTCCATGGTCACCCAGCTGGTACATGACAGAAATTCAAACCTGTTTTCCCCTTaGAGTAACACGCTATCTCAG +
Preference number: 4 (lower is better)
Translates to: ERLCNLSMVTQLVHDRNSNLFSP*SNTLSQ
Trigger: CTGAGATAGCGTGTTACTTCAAGGGGAAAACAGGTT...TGAATTTCTGTCATGTACCAGCTGGGTGACCATGGACAAGTTACATAGTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp CTGCATTTCTCTAAGAATGGTCTGGAAAGGGATCTGGCAGGAAATAAAGAATATAGGTGGTGGAAATCCTaGAATGCTTCTGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LHFSKNGLERDLAGNKEYRWWKS*NASGSG
Trigger: CCCAGAGCCAGAAGCATTTCAGGATTTCCACCACCT...ATATTCTTTATTTCCTGCCAGATCCCTTTCCAGACCATTCTTAGAGAAATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGGACATCCATGGGATTTaGGGAACGAGGAGATTGCAA +
Preference number: 4 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTDIHGI*GTRRLQ
Trigger: TTGCAATCTCCTCGTTCCTCAAATCCCATGGATGTC...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp GCCTTTCTGATACGGCTAGCCTCAATAAATGGAAATGCAATAATTGTGGCTAAATCTTGGCTTTCCGCTTaGGCTTGGGTATCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: AFLIRLASINGNAIIVAKSWLSA*AWVSGL
Trigger: CAAGCCAGATACCCAAGCGCAAGCGGAAAGCCAAGA...TTTAGCCACAATTATTGCATTTCCATTTATTGAGGCTAGCCGTATCAGAAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp AAATCCTTGGAGTTATCTACAGGAATCTTGTGGACGCAATTCAAGGATAACATTCCACCACGTCGTTCTTaGGCCTCTTCTTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: KSLELSTGILWTQFKDNIPPRRS*ASSWLS
Trigger: GGAAAGCCAAGAAGAGGCGCAAGAACGACGTGGTGG...AATGTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAACTCCAAGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCAGCACAGCTTCAGCTTaGCTTTCACCACCACCACGT +
Preference number: 4 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLSTASA*LSPPPR
Trigger: ACGTGGTGGTGGTGAAAGGCAAGCTGAAGCTGTGCT...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCTGGACCGGTTTTTGCTaGCACTGCTACTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLWTGFC*HCYCCW
Trigger: CCAACAGCAGTAGCAGTGGCAGCAAAAACCGGTCCA...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCGTGTGTAGCCCTTATTaGTGCTGGATGGGTCATCCG +
Preference number: 4 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLVCSPY*CWMGHP
Trigger: CGGATGACCCATCCAGCAGCAATAAGGGCTACACAC...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCGTGGATCCTGCTTTCTaGCGGAAATCCTTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLVDPAF*RKSLAG
Trigger: GCCTGCTAAGGATTTCCGCCAGAAAGCAGGATCCAC...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp GAGAGACTATGTAACTTGTCCATGGTCACCCAGCTGGTACATGACAGAAATTCACTTCTTCTACCCCTATaGCATGAGACCTGGAAATCA +
Preference number: 4 (lower is better)
Translates to: ERLCNLSMVTQLVHDRNSLLLPL*HETWKS
Trigger: TGATTTCCAGGTCTCATGCCATAGGGGTAGAAGAAG...TGAATTTCTGTCATGTACCAGCTGGGTGACCATGGACAAGTTACATAGTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp AACAACCCCCAAGTTTATGCTGTCTCCAGTCTTTACGGTACATGGATCAACACATATGTAACTTGTCCATaGTCACCCAGCTGGTACATG +
Preference number: 4 (lower is better)
Translates to: NNPQVYAVSSLYGTWINTYVTCP*SPSWYM
Trigger: CATGTACCAGCTGGGTGACCATGGACAAGTTACATA...TGTGTTGATCCATGTACCGTAAAGACTGGAGACAGCATAAACTTGGGGGTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp CTGCATTTCTCTAAGAATGGTCTGGAAAGGGATCTGGCAGGAAATAAAGAATATTTCCTCCCTTGTTATTaGCAGTCAGCCTTCGTGGGA +
Preference number: 4 (lower is better)
Translates to: LHFSKNGLERDLAGNKEYFLPCY*QSAFVG
Trigger: TCCCACGAAGGCTGACTGTCAATAACAAGGGAGGAA...ATATTCTTTATTTCCTGCCAGATCCCTTTCCAGACCATTCTTAGAGAAATGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp GAGAGACTATGTAACTTGTCCATGGTCACCCAGCTGGTACATGACAGAAATTCAATGGATCAACACACTTaGTCCATGATGCAAACAGTG +
Preference number: 4 (lower is better)
Translates to: ERLCNLSMVTQLVHDRNSMDQHT*SMMQTV
Trigger: CACTGTTTGCATCATGGATCAAGTGTGTTGATCCAT...TGAATTTCTGTCATGTACCAGCTGGGTGACCATGGACAAGTTACATAGTCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp AACAACCCCCAAGTTTATGCTGTCTCCAGTCTTTACGGTACATGGATCAACACAGAGGAACGAGGAGATTaGAAACATGCACTTCAATTG +
Preference number: 4 (lower is better)
Translates to: NNPQVYAVSSLYGTWINTEERGD*KHALQL
Trigger: CAATTGAAGTGCATGTTTGCAATCTCCTCGTTCCTC...TGTGTTGATCCATGTACCGTAAAGACTGGAGACAGCATAAACTTGGGGGTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp TCTTATTACACTTGCATGTCACTCCTTAGTGCAAACTCACTTTTGCTTTATAGAAGTCCATCTAGTTCCTaGTCCCCTCCAGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: SYYTCMSLLSANSLLLYRSPSSS*SPPVST
Trigger: GGTGGAGACTGGAGGGGACCAGGAACTAGATGGACT...TCTATAAAGCAAAAGTGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp AACAACCCCCAAGTTTATGCTGTCTCCAGTCTTTACGGTACATGGATCAACACACCAAGTGTGCCAGTTTaGGCGTTCATTCATTGTTAT +
Preference number: 4 (lower is better)
Translates to: NNPQVYAVSSLYGTWINTPSVPV*AFIHCY
Trigger: ATAACAATGAATGAACGCCCAAACTGGCACACTTGG...TGTGTTGATCCATGTACCGTAAAGACTGGAGACAGCATAAACTTGGGGGTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp CTTTACTTGAAGCCTAATAGGGGGCTGAGACCTCAAGGACTTCACTGGCCTTTCTGCCACATATCAACTTaGATTATTTTTACTCATGGC +
Preference number: 4 (lower is better)
Translates to: LYLKPNRGLRPQGLHWPFCHIST*IIFTHG
Trigger: GCCATGAGTAAAAATAATCCAAGTTGATATGTGGCA...GAAAGGCCAGTGAAGTCCTTGAGGTCTCAGCCCCCTATTAGGCTTCAAGTAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCTTCAGAGGTACCAGATaGGCTAGCTCCAAGGCAAAT +
Preference number: 4 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLFRGTR*ASSKAN
Trigger: ATTTGCCTTGGAGCTAGCTCATCTGGTACCTCTGAA...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp AACAACCCCCAAGTTTATGCTGTCTCCAGTCTTTACGGTACATGGATCAACACAGGTACAAATGTGATATaGTTACATCCAGGACAAGAG +
Preference number: 4 (lower is better)
Translates to: NNPQVYAVSSLYGTWINTGTNVI*LHPGQE
Trigger: CTCTTGTCCTGGATGTAATCATATCACATTTGTACC...TGTGTTGATCCATGTACCGTAAAGACTGGAGACAGCATAAACTTGGGGGTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp GCCTTTCTGATACGGCTAGCCTCAATAAATGGAAATGCAATAATTGTGGCTAAATTGTTCATGCCCGTCTaGAGATTTACGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: AFLIRLASINGNAIIVAKLFMPV*RFTNSS
Trigger: GCTGGAGTTCGTAAATCTTCAGACGGGCATGAACAA...TTTAGCCACAATTATTGCATTTCCATTTATTGAGGCTAGCCGTATCAGAAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp TGCAAACATGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGACACCCAGCTGGTACATaGCAGAAATTCAGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: CKHALQLCFGFSVAHVSRHPAGT*QKFREK
Trigger: TTTTTCCCTGAATTTCTGTCATGTACCAGCTGGGTG...TCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGAAAAGGGCAGAAGCTTaGAACACAGCTGCTTACTAT +
Preference number: 4 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTKRAEA*NTAAYY
Trigger: ATAGTAAGCAGCTGTGTTTCAAGCTTCTGCCCTTTT...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGTCACCAGCATCTCTCTaGCTTAGTCAGAATATCCTA +
Preference number: 4 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTSPASL*LSQNIL
Trigger: TAGGATATTCTGACTAAGTCAGAGAGATGCTGGTGA...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp GAGAGACTATGTAACTTGTCCATGGTCACCCAGCTGGTACATGACAGAAATTCAAGGTCTTATTACACTTaGATGTCACTCCTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: ERLCNLSMVTQLVHDRNSRSYYT*MSLLSA
Trigger: TGCACTAAGGAGTGACATGCAAGTGTAATAAGACCT...TGAATTTCTGTCATGTACCAGCTGGGTGACCATGGACAAGTTACATAGTCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp TCTACCTACCACAGTGCCTATCTGACTCATGATAGGCAGAGTATAATATATCTGGATGGTCTCCAGAAATaGCCATTTCAACTCAGCATC +
Preference number: 4 (lower is better)
Translates to: STYHSAYLTHDRQSIIYLDGLQK*PFQLSI
Trigger: GATGCTGAGTTGAAATGGGCATTTCTGGAGACCATC...CAGATATATTATACTCTGCCTATCATGAGTCAGATAGGCACTGTGGTAGGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp TGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAAGCCTTCGTGGGACTTaGTCACAATGTAGGATCAGA +
Preference number: 4 (lower is better)
Translates to: CTSIVFWLFSGTCFQKISSLRGT*SQCRIR
Trigger: TCTGATCCTACATTGTGACCAAGTCCCACGAAGGCT...TGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp GAGAGACTATGTAACTTGTCCATGGTCACCCAGCTGGTACATGACAGAAATTCATTGCGACAGTATGTCTaGGTCTTAACCTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: ERLCNLSMVTQLVHDRNSLRQYV*VLTFPF
Trigger: AAAAGGAAAGGTTAAGACCCAGACATACTGTCGCAA...TGAATTTCTGTCATGTACCAGCTGGGTGACCATGGACAAGTTACATAGTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR CAA 72 bp TTTGAGGAACGAGGAGATTGCAAACATGCACTTCAATaGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: FEERGDCKHALQ*CFGFSVAHVSR
Trigger: TCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCAATCTCCTCGTTCCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp GAGAGACTATGTAACTTGTCCATGGTCACCCAGCTGGTACATGACAGAAATTCAACATTTGGTTTTCATTaGACATACAATCACCATCGG +
Preference number: 4 (lower is better)
Translates to: ERLCNLSMVTQLVHDRNSTFGFH*TYNHHR
Trigger: CCGATGGTGATTGTATGTTCAATGAAAACCAAATGT...TGAATTTCTGTCATGTACCAGCTGGGTGACCATGGACAAGTTACATAGTCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp AACAACCCCCAAGTTTATGCTGTCTCCAGTCTTTACGGTACATGGATCAACACATCATGCTTTTGGCTTTaGCTTCAGTTAGTAACATCA +
Preference number: 4 (lower is better)
Translates to: NNPQVYAVSSLYGTWINTSCFWL*LQLVTS
Trigger: TGATGTTACTAACTGAAGTCAAAGCCAAAAGCATGA...TGTGTTGATCCATGTACCGTAAAGACTGGAGACAGCATAAACTTGGGGGTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp TGCAAACATGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAGAAAGTGCTCGTTCCTaGATTATTCATGCTTTTGGC +
Preference number: 4 (lower is better)
Translates to: CKHALQLCFGFSVAHVSRESARS*IIHAFG
Trigger: GCCAAAAGCATGAATAATTCAGGAACGAGCACTTTC...TCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGTTACAGAAAGATGACTaGGACTCAGAGTTTGTGACT +
Preference number: 4 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTLQKDD*DSEFVT
Trigger: AGTCACAAACTCTGAGTCTCAGTCATCTTTCTGTAA...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp TGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGAAAGCACAGGTTATTaGGACAGGCCCATACTTTGT +
Preference number: 4 (lower is better)
Translates to: CTSIVFWLFSGTCFQKISESTGY*DRPILC
Trigger: ACAAAGTATGGGCCTGTCTCAATAACCTGTGCTTTC...TGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp TGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGACAAAGTCATTTTCTaGTCCGGTTTGCTTCGACTG +
Preference number: 4 (lower is better)
Translates to: CTSIVFWLFSGTCFQKISDKVIF*SGLLRL
Trigger: CAGTCGAAGCAAACCGGATCAGAAAATGACTTTGTC...TGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp CTGCATTTCTCTAAGAATGGTCTGGAAAGGGATCTGGCAGGAAATAAAGAATATAACAGTGTTGCCAAGTaGCAGATTCTCCTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: LHFSKNGLERDLAGNKEYNSVAK*QILLSV
Trigger: AACTGAGAGGAGAATCTGTCACTTGGCAACACTGTT...ATATTCTTTATTTCCTGCCAGATCCCTTTCCAGACCATTCTTAGAGAAATGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp GAGAGACTATGTAACTTGTCCATGGTCACCCAGCTGGTACATGACAGAAATTCAAATTGTACAATCAAATaGGCAAGCACTCAAGTCGTA +
Preference number: 4 (lower is better)
Translates to: ERLCNLSMVTQLVHDRNSNCTIK*ASTQVV
Trigger: TACGACTTGAGTGCTTGCTCATTTGATTGTACAATT...TGAATTTCTGTCATGTACCAGCTGGGTGACCATGGACAAGTTACATAGTCTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp TCTTATTACACTTGCATGTCACTCCTTAGTGCAAACTCACTTTTGCTTTATAGATGTAGCCCTTATTGCTaGTGGATGGGTCATCCGACT +
Preference number: 4 (lower is better)
Translates to: SYYTCMSLLSANSLLLYRCSPYC*WMGHPT
Trigger: AGTCGGATGACCCATCCAGCAGCAATAAGGGCTACA...TCTATAAAGCAAAAGTGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGTTAAGCCTGGTGCTCTaGAAATTAATACTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTLSLVL*KLILAG
Trigger: ACCTGCAAGTATTAATTTGCAGAGCACCAGGCTTAA...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGCACTCCAGGAGAATCTaGATAATCTTTTTCGGTCTT +
Preference number: 4 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTHSRRI*IIFFGL
Trigger: AAGACCGAAAAAGATTATGCAGATTCTCCTGGAGTG...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp CTGCATTTCTCTAAGAATGGTCTGGAAAGGGATCTGGCAGGAAATAAAGAATATTTTCTTTCGGCAGGATaGTCTTTTTCTTCCACCCCT +
Preference number: 4 (lower is better)
Translates to: LHFSKNGLERDLAGNKEYFLSAG*SFSSTP
Trigger: AGGGGTGGAAGAAAAAGAGCATCCTGCCGAAAGAAA...ATATTCTTTATTTCCTGCCAGATCCCTTTCCAGACCATTCTTAGAGAAATGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp AAATCCTTGGAGTTATCTACAGGAATCTTGTGGACGCAATTCAAGGATAACATTCAACCCCCAAGTTTATaGTGTCTCCAGTCTTTACGG +
Preference number: 4 (lower is better)
Translates to: KSLELSTGILWTQFKDNIQPPSL*CLQSLR
Trigger: CCGTAAAGACTGGAGACAGCATAAACTTGGGGGTTG...AATGTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAACTCCAAGGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp CTGCATTTCTCTAAGAATGGTCTGGAAAGGGATCTGGCAGGAAATAAAGAATATGCTAAGTCCTTAGGATaGCTGGCATTTGTAACTCCT +
Preference number: 4 (lower is better)
Translates to: LHFSKNGLERDLAGNKEYAKSLG*LAFVTP
Trigger: AGGAGTTACAAATGCCAGCCATCCTAAGGACTTAGC...ATATTCTTTATTTCCTGCCAGATCCCTTTCCAGACCATTCTTAGAGAAATGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGAGTCTTTACGGTACATaGATCAACACACTTGATCCA +
Preference number: 4 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTSLYGT*INTLDP
Trigger: TGGATCAAGTGTGTTGATCCATGTACCGTAAAGACT...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCCTGAAAAATGACCTGTaGCTTGATAGAACAACCCCC +
Preference number: 4 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLLKNDL*LDRTTP
Trigger: GGGGGTTGTTCTATCAAGCCACAGGTCATTTTTCAG...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp TGCAAACATGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGACTCCAGCTTTTTATCTaGCTGTGCATTCTGACAATT +
Preference number: 4 (lower is better)
Translates to: CKHALQLCFGFSVAHVSRLQLFI*LCILTI
Trigger: AATTGTCAGAATGCACAGTCAGATAAAAAGCTGGAG...TCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp TGCAAACATGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAGTTGTCCCTAACTACTaGGTAGTAAATTTAGCCTAC +
Preference number: 4 (lower is better)
Translates to: CKHALQLCFGFSVAHVSRVVPNY*VVNLAY
Trigger: GTAGGCTAAATTTACTACTCAGTAGTTAGGGACAAC...TCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGACACGTCTAGGGAAATaGTTTCCAGAATCTGAAATT +
Preference number: 4 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTTRLGK*FPESEI
Trigger: AATTTCAGATTCTGGAAATCATTTCCCTAGACGTGT...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp TGCAAACATGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAATCATGTGTAGATTCTaGAAAATGACCTGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: CKHALQLCFGFSVAHVSRIMCRF*KMTCGL
Trigger: CAAGCCACAGGTCATTTTTCAGAATCTACACATGAT...TCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCAAATATAGCCAAGTGTaGCAGTTTGGGCGTTCATTC +
Preference number: 4 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLKYSQV*QFGRSF
Trigger: GAATGAACGCCCAAACTGGCACACTTGGCTATATTT...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp TCTACCTACCACAGTGCCTATCTGACTCATGATAGGCAGAGTATAATATATCTGTCAGCACTAGCACAGTaGTTTTCTGATGTCATAGAT +
Preference number: 4 (lower is better)
Translates to: STYHSAYLTHDRQSIIYLSALAQ*FSDVID
Trigger: ATCTATGACATCAGAAAAGCACTGTGCTAGTGCTGA...CAGATATATTATACTCTGCCTATCATGAGTCAGATAGGCACTGTGGTAGGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp TCTACCTACCACAGTGCCTATCTGACTCATGATAGGCAGAGTATAATATATCTGGTTTTGGCTTTTCAGTaGCACATGTTTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: STYHSAYLTHDRQSIIYLVLAFQ*HMFPED
Trigger: ATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC...CAGATATATTATACTCTGCCTATCATGAGTCAGATAGGCACTGTGGTAGGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR CAA 72 bp AACGAGGAGATTGCAAACATGCACTTCAATTGTGTTTaGGCTTTTCAGTGGCACATGTTTCCAGAAGATATC +
Preference number: 4 (lower is better)
Translates to: NEEIANMHFNCV*AFQWHMFPEDI
Trigger: GATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCAATCTCCTCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR CAA 72 bp TCAAAGAAAGGTTCTAGTTTTGGACATCCATGGGATTaGAGGAACGAGGAGATTGCAAACATGCACTTCAAT +
Preference number: 4 (lower is better)
Translates to: SKKGSSFGHPWD*RNEEIANMHFN
Trigger: ATTGAAGTGCATGTTTGCAATCTCCTCGTTCCTCAAATCCCATGGATGTCCAAAACTAGAACCTTTCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp TCTTATTACACTTGCATGTCACTCCTTAGTGCAAACTCACTTTTGCTTTATAGACAGCTCTTTGGATATTaGATGATGTCCTCGGATCAG +
Preference number: 4 (lower is better)
Translates to: SYYTCMSLLSANSLLLYRQLFGY*MMSSDQ
Trigger: CTGATCCGAGGACATCATTCAATATCCAAAGAGCTG...TCTATAAAGCAAAAGTGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp AAATCCTTGGAGTTATCTACAGGAATCTTGTGGACGCAATTCAAGGATAACATTTCAATAGAGTTGCTGTaGGGATTCACTGAGATCATG +
Preference number: 4 (lower is better)
Translates to: KSLELSTGILWTQFKDNISIELL*GFTEIM
Trigger: CATGATCTCAGTGAATCCTCACAGCAACTCTATTGA...AATGTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAACTCCAAGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp TCTTATTACACTTGCATGTCACTCCTTAGTGCAAACTCACTTTTGCTTTATAGACCGGTTTGCTTCGACTaGCCTAGTTATATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: SYYTCMSLLSANSLLLYRPVCFD*PSYISH
Trigger: ATGACTGATATAACTAGGTCAGTCGAAGCAAACCGG...TCTATAAAGCAAAAGTGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp TGCAAACATGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAGTGCAAACTCACTTTTaGTTTATAGAAGAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: CKHALQLCFGFSVAHVSRVQTHF*FIEEPN
Trigger: ATTGGGCTCTTCTATAAAGCAAAAGTGAGTTTGCAC...TCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp AGTGATTTGTCTAAGGTTATACAGATAATAGGTGGATATCCCAGATTTCAGACTTTTCAACTCAGCATCTaGCGACAGGTCTACCTAATC +
Preference number: 4 (lower is better)
Translates to: SDLSKVIQIIGGYPRFQTFQLSI*RQVYLI
Trigger: GATTAGGTAGACCTGTCGGCAGATGCTGAGTTGAAA...AGTCTGAAATCTGGGATATCCACCTATTATCTGTATAACCTTAGACAAATCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp TCTTATTACACTTGCATGTCACTCCTTAGTGCAAACTCACTTTTGCTTTATAGATTGTGTTTTGTGTTCTaGATTTGCTCATGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SYYTCMSLLSANSLLLYRLCFVF*ICSCWP
Trigger: GGGCCAGCATGAGCAAATGCAGAACACAAAACACAA...TCTATAAAGCAAAAGTGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCCTTAACCTTTCCTTTTaGTATGAACGCATACGTGAG +
Preference number: 4 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLLNLSF*YERIRE
Trigger: CTCACGTATGCGTTCATAGCAAAAGGAAAGGTTAAG...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp GCCTTTCTGATACGGCTAGCCTCAATAAATGGAAATGCAATAATTGTGGCTAAAATACTCATACACATTTaGGACAGTATGTCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: AFLIRLASINGNAIIVAKILIHI*DSMSGS
Trigger: AGACCCAGACATACTGTCGCAAATGTGTATGAGTAT...TTTAGCCACAATTATTGCATTTCCATTTATTGAGGCTAGCCGTATCAGAAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGTATACAGATAATAGGTaGATATCCCAGATTTCAGAC +
Preference number: 4 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTYTDNR*ISQISD
Trigger: GTCTGAAATCTGGGATATCCACCTATTATCTGTATA...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGAATAGTCTGGGTTTATaGAAAACAAACTCCGTAAAC +
Preference number: 4 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTNSLGL*KTNSVN
Trigger: GTTTACGGAGTTTGTTTTCCATAAACCCAGACTATT...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp AGTGATTTGTCTAAGGTTATACAGATAATAGGTGGATATCCCAGATTTCAGACTAGTTTTGGACATCCATaGGATTTGAGGAACGAGGAG +
Preference number: 4 (lower is better)
Translates to: SDLSKVIQIIGGYPRFQTSFGHP*DLRNEE
Trigger: CTCCTCGTTCCTCAAATCCCATGGATGTCCAAAACT...AGTCTGAAATCTGGGATATCCACCTATTATCTGTATAACCTTAGACAAATCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp GCCTTTCTGATACGGCTAGCCTCAATAAATGGAAATGCAATAATTGTGGCTAAACATTTTACAGAAAGATaGCTGAGACTCAGAGTTTGT +
Preference number: 4 (lower is better)
Translates to: AFLIRLASINGNAIIVAKHFTER*LRLRVC
Trigger: ACAAACTCTGAGTCTCAGTCATCTTTCTGTAAAATG...TTTAGCCACAATTATTGCATTTCCATTTATTGAGGCTAGCCGTATCAGAAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp AGTGATTTGTCTAAGGTTATACAGATAATAGGTGGATATCCCAGATTTCAGACTTCTACAGCCTTAAAGTaGGTTACCGGTTTAATGCAG +
Preference number: 4 (lower is better)
Translates to: SDLSKVIQIIGGYPRFQTSTALK*VTGLMQ
Trigger: CTGCATTAAACCGGTAACTCACTTTAAGGCTGTAGA...AGTCTGAAATCTGGGATATCCACCTATTATCTGTATAACCTTAGACAAATCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp TGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCATTCTCTAAATGCCTGTaGTTTCCAGTTCTTCTTCTA +
Preference number: 4 (lower is better)
Translates to: CTSIVFWLFSGTCFQKISFSKCL*FPVLLL
Trigger: TAGAAGAAGAACTGGAAAGCACAGGCATTTAGAGAA...TGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp TCTACCTACCACAGTGCCTATCTGACTCATGATAGGCAGAGTATAATATATCTGCGTATATTCACTCTTTaGCAAGTTGTAGGTACAAAT +
Preference number: 4 (lower is better)
Translates to: STYHSAYLTHDRQSIIYLRIFTL*QVVGTN
Trigger: ATTTGTACCTACAACTTGGCAAAGAGTGAATATACG...CAGATATATTATACTCTGCCTATCATGAGTCAGATAGGCACTGTGGTAGGTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp TGCAAACATGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAATGCAAAGTGGTTTTaGAGAATTCTCACTTTCATG +
Preference number: 4 (lower is better)
Translates to: CKHALQLCFGFSVAHVSRNAKWF*RILTFM
Trigger: CATGAAAGTGAGAATTCTGCAAAACCACTTTGCATT...TCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCTACAGGCTAGCCAGATaGTTTGTTCAATTTATTTGC +
Preference number: 4 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLYRLAR*FVQFIC
Trigger: GCAAATAAATTGAACAAAGCATCTGGCTAGCCTGTA...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp AGTGATTTGTCTAAGGTTATACAGATAATAGGTGGATATCCCAGATTTCAGACTAGCTTAAAAATACGCTaGACATGCGACAATGGTGCT +
Preference number: 4 (lower is better)
Translates to: SDLSKVIQIIGGYPRFQTSLKIR*TCDNGA
Trigger: AGCACCATTGTCGCATGTCCAGCGTATTTTTAAGCT...AGTCTGAAATCTGGGATATCCACCTATTATCTGTATAACCTTAGACAAATCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp TCTACCTACCACAGTGCCTATCTGACTCATGATAGGCAGAGTATAATATATCTGAGTACATTAAGTTTATaGTTGTCCCTAACTACTGAG +
Preference number: 4 (lower is better)
Translates to: STYHSAYLTHDRQSIIYLSTLSL*LSLTTE
Trigger: CTCAGTAGTTAGGGACAACCATAAACTTAATGTACT...CAGATATATTATACTCTGCCTATCATGAGTCAGATAGGCACTGTGGTAGGTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCGCTAGCCTCAATAAATaGAAATGCAATAATTGTGGC +
Preference number: 4 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLASLNK*KCNNCG
Trigger: GCCACAATTATTGCATTTCCATTTATTGAGGCTAGC...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp TGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAACTTCAATTGTGTTTTaGCTTTTCAGTGGCACATGT +
Preference number: 4 (lower is better)
Translates to: CTSIVFWLFSGTCFQKISTSIVF*LFSGTC
Trigger: ACATGTGCCACTGAAAAGCCAAAACACAATTGAAGT...TGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp AAATCCTTGGAGTTATCTACAGGAATCTTGTGGACGCAATTCAAGGATAACATTCTTATACACTTCCTCTaGAGTCTAAAGAAATCACAG +
Preference number: 4 (lower is better)
Translates to: KSLELSTGILWTQFKDNILIHFL*SLKKSQ
Trigger: CTGTGATTTCTTTAGACTTCAGAGGAAGTGTATAAG...AATGTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAACTCCAAGGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR TCA 90 bp TCTTATTACACTTGCATGTCACTCCTTAGTGCAAACTCACTTTTGCTTTATAGAGCATTTAATTGCCACTaGCTTAATGAAAGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: SYYTCMSLLSANSLLLYRAFNCH*LNESWH
Trigger: ATGCCAGCTTTCATTAAGTCAGTGGCAATTAAATGC...TCTATAAAGCAAAAGTGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp AAATCCTTGGAGTTATCTACAGGAATCTTGTGGACGCAATTCAAGGATAACATTTGTCTATGTAGGCCATaGATCAAGACCATTAACTTA +
Preference number: 4 (lower is better)
Translates to: KSLELSTGILWTQFKDNICLCRP*IKTINL
Trigger: TAAGTTAATGGTCTTGATCCATGGCCTACATAGACA...AATGTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAACTCCAAGGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp GCCTTTCTGATACGGCTAGCCTCAATAAATGGAAATGCAATAATTGTGGCTAAATATACTTTGCTATTCTaGCCAAATCTGTTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: AFLIRLASINGNAIIVAKYTLLF*PNLFSV
Trigger: CACTGAAAACAGATTTGGCCAGAATAGCAAAGTATA...TTTAGCCACAATTATTGCATTTCCATTTATTGAGGCTAGCCGTATCAGAAAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp AGTGATTTGTCTAAGGTTATACAGATAATAGGTGGATATCCCAGATTTCAGACTCCAAACACATTAACCTaGAATGGTTACATAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SDLSKVIQIIGGYPRFQTPNTLT*NGYISR
Trigger: TCTGCTTATGTAACCATTGCAGGTTAATGTGTTTGG...AGTCTGAAATCTGGGATATCCACCTATTATCTGTATAACCTTAGACAAATCACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp AGTGATTTGTCTAAGGTTATACAGATAATAGGTGGATATCCCAGATTTCAGACTAGGAGATTGCAAACATaGACTTCAATTGTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SDLSKVIQIIGGYPRFQTRRLQT*TSIVFW
Trigger: CCAAAACACAATTGAAGTGCATGTTTGCAATCTCCT...AGTCTGAAATCTGGGATATCCACCTATTATCTGTATAACCTTAGACAAATCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR GCA 90 bp AGTGATTTGTCTAAGGTTATACAGATAATAGGTGGATATCCCAGATTTCAGACTTGCTGCATTACAAGTTaGCACATATCAACTTGGATT +
Preference number: 4 (lower is better)
Translates to: SDLSKVIQIIGGYPRFQTCCITS*HISTWI
Trigger: AATCCAAGTTGATATGTGGCAACTTGTAATGCAGCA...AGTCTGAAATCTGGGATATCCACCTATTATCTGTATAACCTTAGACAAATCACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp AAATCCTTGGAGTTATCTACAGGAATCTTGTGGACGCAATTCAAGGATAACATTTTCTCAAGACTCAGCTaGAAGATTTGTATCATAACT +
Preference number: 4 (lower is better)
Translates to: KSLELSTGILWTQFKDNIFSRLS*KICIIT
Trigger: AGTTATGATACAAATCTTCCAGCTGAGTCTTGAGAA...AATGTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAACTCCAAGGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR CAA 72 bp CCAGTTATAATGTTATATAACCCCCTAAGTCACACTTaGAGCCACTATGCTATGTTGCCTTATACTTTAGAT +
Preference number: 4 (lower is better)
Translates to: PVIMLYNPLSHT*SHYAMLPYTLD
Trigger: ATCTAAAGTATAAGGCAACATAGCATAGTGGCTCAAAGTGTGACTTAGGGGGTTATATAACATTATAACTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
3UTR CAA 72 bp AAAGTGCTCGTTCCTGAATTATTCATGCTTTTGGCTTaGACTTCAGTTAGTAACATCAATTCTAAGAGAACT +
Preference number: 4 (lower is better)
Translates to: KVLVPELFMLLA*TSVSNINSKRT
Trigger: AGTTCTCTTAGAATTGATGTTACTAACTGAAGTCAAAGCCAAAAGCATGAATAATTCAGGAACGAGCACTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CCA 90 bp TCTTATTACACTTGCATGTCACTCCTTAGTGCAAACTCACTTTTGCTTTATAGATCCATGAGATATGTCTaGTTCTCTTCATTTTACAGA +
Preference number: 4 (lower is better)
Translates to: SYYTCMSLLSANSLLLYRSMRYV*FSSFYR
Trigger: TCTGTAAAATGAAGAGAACCAGACATATCTCATGGA...TCTATAAAGCAAAAGTGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS TCA 90 bp CCTCTTTTGTGTGGCTGCGGCGCGCCGGGCTCCGCCGGGTGGAGTTaGGCCCGCGGCGGCGGCTCGGGGCGGCCGGACTGGCGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: PLLCGCGAPGSAGWS*ARGGGSGRPDWRLL
Trigger: CAACAGCCGCCAGTCCGGCCGCCCCGAGCCGCCGCCGCGGGCTCAACTCCACCCGGCGGAGCCCGGCGCGCCGCAGCCACACAAAAGAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS GCA 90 bp CTCGGGCTCCTCCGGCTCCCGGCGCGCCCCGCGCATGCTGCCCTCTaGGCCGCGGAGGTTGGTCATGCTCAGGTCGAGCTCGCCCCTCGG +
Preference number: 5 (lower is better)
Translates to: LGLLRLPARPAHAAL*AAEVGHAQVELAPR
Trigger: CCGAGGGGCGAGCTCGACCTGAGCATGACCAACCTCCGCGGCGCAGAGGGCAGCATGCGCGGGGCGCGCCGGGAGCCGGAGGAGCCCGAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS GCA 90 bp GCAGCGCGAAGGCGCTCAGCGAGGAGTCCACGAAGGAGCTGGCCGTaGTCTGGCGCCCCCAGCTCTCGGGTGGGCTGCAGGGCGCCGGAC +
Preference number: 5 (lower is better)
Translates to: AARRRSARSPRRSWP*SGAPSSRVGCRAPD
Trigger: GTCCGGCGCCCTGCAGCCCACCCGAGAGCTGGGGGCGCCAGAGCACGGCCAGCTCCTTCGTGGACTCCTCGCTGAGCGCCTTCGCGCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 90 bp GCCTCTGCACCGGCTGAGGTTGCTCGGCCGTGGGTGGCTCCTGGCTaGCACCCTCCGGCGAGCTCTGCTCCGCACCCAGAACGGGGGCGG +
Preference number: 5 (lower is better)
Translates to: ASAPAEVARPWVAPG*HPPASSAPHPERGR
Trigger: CCGCCCCCGTTCTGGGTGCGGAGCAGAGCTCGCCGGAGGGTGCCAGCCAGGAGCCACCCACGGCCGAGCAACCTCAGCCGGTGCAGAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS GCA 90 bp GGCGCGCCCCGCGCATGCTGCCCTCTGCGCCGCGGAGGTTGGTCATaGTCAGGTCGAGCTCGCCCCTCGGGATCTCCTGGGAGCCGCGTT +
Preference number: 5 (lower is better)
Translates to: GAPRACCPLRRGGWS*SGRARPSGSPGSRV
Trigger: AACGCGGCTCCCAGGAGATCCCGAGGGGCGAGCTCGACCTGAGCATGACCAACCTCCGCGGCGCAGAGGGCAGCATGCGCGGGGCGCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 90 bp GCGAAGGCGCTCAGCGAGGAGTCCACGAAGGAGCTGGCCGTGCTCTaGCGCCCCCAGCTCTCGGGTGGGCTGCAGGGCGCCGGACTGCTG +
Preference number: 5 (lower is better)
Translates to: AKALSEESTKELAVL*RPQLSGGLQGAGLL
Trigger: CAGCAGTCCGGCGCCCTGCAGCCCACCCGAGAGCTGGGGGCGCCAGAGCACGGCCAGCTCCTTCGTGGACTCCTCGCTGAGCGCCTTCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 90 bp AGGGCAGCAGCGCGAAGGCGCTCAGCGAGGAGTCCACGAAGGAGCTaGCCGTGCTCTGGCGCCCCCAGCTCTCGGGTGGGCTGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: RAAARRRSARSPRRS*PCSGAPSSRVGCRA
Trigger: CGCCCTGCAGCCCACCCGAGAGCTGGGGGCGCCAGAGCACGGCCAGCTCCTTCGTGGACTCCTCGCTGAGCGCCTTCGCGCTGCTGCCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS GCA 90 bp TGCTCGGCCGTGGGTGGCTCCTGGCTGGCACCCTCCGGCGAGCTCTaGTCCGCACCCAGAACGGGGGCGGCCACAGCAGAGTCTCGCGTT +
Preference number: 5 (lower is better)
Translates to: CSAVGGSWLAPSGEL*SAPRTGAATAESRV
Trigger: AACGCGAGACTCTGCTGTGGCCGCCCCCGTTCTGGGTGCGGAGCAGAGCTCGCCGGAGGGTGCCAGCCAGGAGCCACCCACGGCCGAGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 90 bp GAAGCCCACGGACGTGGAGGAGGAGGACGGGGAGGCGGCTCGTGCTaGAGGCGTGCTCCTGGGCGCGCCCGCGGAACTGGAGTTGACACC +
Preference number: 5 (lower is better)
Translates to: EAHGRGGGGRGGGSC*RRAPGRARGTGVDT
Trigger: GGTGTCAACTCCAGTTCCGCGGGCGCGCCCAGGAGCACGCCTCCAGCACGAGCCGCCTCCCCGTCCTCCTCCTCCACGTCCGTGGGCTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS GCA 90 bp GAAGAAGCCCACGGACGTGGAGGAGGAGGACGGGGAGGCGGCTCGTaGTGGAGGCGTGCTCCTGGGCGCGCCCGCGGAACTGGAGTTGAC +
Preference number: 5 (lower is better)
Translates to: EEAHGRGGGGRGGGS*WRRAPGRARGTGVD
Trigger: GTCAACTCCAGTTCCGCGGGCGCGCCCAGGAGCACGCCTCCAGCACGAGCCGCCTCCCCGTCCTCCTCCTCCACGTCCGTGGGCTTCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 90 bp CGGAGGTTGGTCATGCTCAGGTCGAGCTCGCCCCTCGGGATCTCCTaGGAGCCGCGTTCCCCCGGAGGCCTCTGCCAGCTGCAGCTCGCG +
Preference number: 5 (lower is better)
Translates to: RRLVMLRSSSPLGIS*EPRSPGGLCQLQLA
Trigger: CGCGAGCTGCAGCTGGCAGAGGCCTCCGGGGGAACGCGGCTCCCAGGAGATCCCGAGGGGCGAGCTCGACCTGAGCATGACCAACCTCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS GCA 90 bp CGGTGGAGGTGCCGGCCTCCCGCAGGGGTGTGTAGCCCTTATTGCTaGTGGATGGGTCATCCGACTGGGAGCTCCCGGAGTCCCGCCTGG +
Preference number: 5 (lower is better)
Translates to: RWRCRPPAGVCSPYC*WMGHPTGSSRSPAW
Trigger: CCAGGCGGGACTCCGGGAGCTCCCAGTCGGATGACCCATCCAGCAGCAATAAGGGCTACACACCCCTGCGGGAGGCCGGCACCTCCACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS GCA 90 bp CAGAACGGGGGCGGCCACAGCAGAGTCTCGCGTTTGACCAGCTACTaGGTCCAAGACCGACTCGGTGGAGGTGCCGGCCTCCCGCAGGGG +
Preference number: 5 (lower is better)
Translates to: QNGGGHSRVSRLTSY*VQDRLGGGAGLPQG
Trigger: CCCCTGCGGGAGGCCGGCACCTCCACCGAGTCGGTCTTGGACGCAGTAGCTGGTCAAACGCGAGACTCTGCTGTGGCCGCCCCCGTTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS TCA 90 bp TGCTCCGCACCCAGAACGGGGGCGGCCACAGCAGAGTCTCGCGTTTaGCCAGCTACTGCGTCCAAGACCGACTCGGTGGAGGTGCCGGCC +
Preference number: 5 (lower is better)
Translates to: CSAPRTGAATAESRV*PATASKTDSVEVPA
Trigger: GGCCGGCACCTCCACCGAGTCGGTCTTGGACGCAGTAGCTGGTCAAACGCGAGACTCTGCTGTGGCCGCCCCCGTTCTGGGTGCGGAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS GCA 90 bp ACTCGGTGGAGGTGCCGGCCTCCCGCAGGGGTGTGTAGCCCTTATTaGTGCTGGATGGGTCATCCGACTGGGAGCTCCCGGAGTCCCGCC +
Preference number: 5 (lower is better)
Translates to: TRWRCRPPAGVCSPY*CWMGHPTGSSRSPA
Trigger: GGCGGGACTCCGGGAGCTCCCAGTCGGATGACCCATCCAGCAGCAATAAGGGCTACACACCCCTGCGGGAGGCCGGCACCTCCACCGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 90 bp AGGCGTGCTCCTGGGCGCGCCCGCGGAACTGGAGTTGACACCCCCTaGAGCCCTAGGGTGGCTCCTGGACCGGTTTTTGCTGCCACTGCT +
Preference number: 5 (lower is better)
Translates to: RRAPGRARGTGVDTP*SPRVAPGPVFAATA
Trigger: AGCAGTGGCAGCAAAAACCGGTCCAGGAGCCACCCTAGGGCTCCAGGGGGTGTCAACTCCAGTTCCGCGGGCGCGCCCAGGAGCACGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 90 bp TGGAGGTGCCGGCCTCCCGCAGGGGTGTGTAGCCCTTATTGCTGCTaGATGGGTCATCCGACTGGGAGCTCCCGGAGTCCCGCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: WRCRPPAGVCSPYCC*MGHPTGSSRSPAWW
Trigger: CCACCAGGCGGGACTCCGGGAGCTCCCAGTCGGATGACCCATCCAGCAGCAATAAGGGCTACACACCCCTGCGGGAGGCCGGCACCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 90 bp GTTTGTAAACTGCCTCTGCACCGGCTGAGGTTGCTCGGCCGTGGGTaGCTCCTGGCTGGCACCCTCCGGCGAGCTCTGCTCCGCACCCAG +
Preference number: 5 (lower is better)
Translates to: VCKLPLHRLRLLGRG*LLAGTLRRALLRTQ
Trigger: CTGGGTGCGGAGCAGAGCTCGCCGGAGGGTGCCAGCCAGGAGCCACCCACGGCCGAGCAACCTCAGCCGGTGCAGAGGCAGTTTACAAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 90 bp GGCGCGCCCGCGGAACTGGAGTTGACACCCCCTGGAGCCCTAGGGTaGCTCCTGGACCGGTTTTTGCTGCCACTGCTACTGCTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: GAPAELELTPPGALG*LLDRFLLPLLLLLA
Trigger: GGCCAACAGCAGTAGCAGTGGCAGCAAAAACCGGTCCAGGAGCCACCCTAGGGCTCCAGGGGGTGTCAACTCCAGTTCCGCGGGCGCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 90 bp AGGTCGGGGCCGGCGAACGGGCGCTCGGGCGACACAAAGGAACCATaGAGAAACTTTTTCAGCCCGAGCCGACGGCGGAGCGCAGGGACA +
Preference number: 5 (lower is better)
Translates to: RSGPANGRSGDTKEP*RNFFSPSRRRSAGT
Trigger: TGTCCCTGCGCTCCGCCGTCGGCTCGGGCTGAAAAAGTTTCTCCATGGTTCCTTTGTGTCGCCCGAGCGCCCGTTCGCCGGCCCCGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS CCA 90 bp GCCGGTGGCGATCATGGCGAGCTCCTGGAGTGCAGGACTAGCCTCTaGGATGGAGGCTTGCACAGGGAGGGCGCCAACTGCCCACTAGCT +
Preference number: 5 (lower is better)
Translates to: AGGDHGELLECRTSL*DGGLHREGANCPLA
Trigger: AGCTAGTGGGCAGTTGGCGCCCTCCCTGTGCAAGCCTCCATCCCAGAGGCTAGTCCTGCACTCCAGGAGCTCGCCATGATCGCCACCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS CCA 90 bp GCGGAAATCCTTAGCAGGCCGCCGGTGGCGATCATGGCGAGCTCCTaGAGTGCAGGACTAGCCTCTGGGATGGAGGCTTGCACAGGGAGG +
Preference number: 5 (lower is better)
Translates to: AEILSRPPVAIMASS*SAGLASGMEACTGR
Trigger: CCTCCCTGTGCAAGCCTCCATCCCAGAGGCTAGTCCTGCACTCCAGGAGCTCGCCATGATCGCCACCGGCGGCCTGCTAAGGATTTCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS GCA 90 bp CTCGCGTTTGACCAGCTACTGCGTCCAAGACCGACTCGGTGGAGGTaGCGGCCTCCCGCAGGGGTGTGTAGCCCTTATTGCTGCTGGATG +
Preference number: 5 (lower is better)
Translates to: LAFDQLLRPRPTRWR*RPPAGVCSPYCCWM
Trigger: CATCCAGCAGCAATAAGGGCTACACACCCCTGCGGGAGGCCGGCACCTCCACCGAGTCGGTCTTGGACGCAGTAGCTGGTCAAACGCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 90 bp CAGAGTCTCGCGTTTGACCAGCTACTGCGTCCAAGACCGACTCGGTaGAGGTGCCGGCCTCCCGCAGGGGTGTGTAGCCCTTATTGCTGC +
Preference number: 5 (lower is better)
Translates to: QSLAFDQLLRPRPTR*RCRPPAGVCSPYCC
Trigger: GCAGCAATAAGGGCTACACACCCCTGCGGGAGGCCGGCACCTCCACCGAGTCGGTCTTGGACGCAGTAGCTGGTCAAACGCGAGACTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS TCA 90 bp ATCATGATGAGTTTCTCCTTGTTTGTAAACTGCCTCTGCACCGGCTaGGGTTGCTCGGCCGTGGGTGGCTCCTGGCTGGCACCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: IMMSFSLFVNCLCTG*GCSAVGGSWLAPSG
Trigger: GCCGGAGGGTGCCAGCCAGGAGCCACCCACGGCCGAGCAACCTCAGCCGGTGCAGAGGCAGTTTACAAACAAGGAGAAACTCATCATGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS-3UTR CAA 90 bp GCTGGACATGCGACAATGGTGCTGAGTACTTTGGGGGAAGATCACAACAGTCCTTCTGCGCCGCGGAGGTaGGTCATGCTCAGGTCGAGC +
Preference number: 5 (lower is better)
Translates to: AGHATMVLSTLGEDHNSPSAPRR*VMLRSS
Trigger: GCTCGACCTGAGCATGACCAACCTCCGCGGCGCAGA...AGGACTGTTGTGATCTTCCCCCAAAGTACTCAGCACCATTGTCGCATGTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp CTTTACTTGAAGCCTAATAGGGGGCTGAGACCTCAAGGACTTCACTGGCCTTTCAGGGGCCCGAAGACCTaGAGCTTGTCAGAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: LYLKPNRGLRPQGLHWPFRGPKT*SLSECR
Trigger: CCTGCACTCTGACAAGCTCAAGGTCTTCGGGCCCCT...GAAAGGCCAGTGAAGTCCTTGAGGTCTCAGCCCCCTATTAGGCTTCAAGTAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp GCCTTTCTGATACGGCTAGCCTCAATAAATGGAAATGCAATAATTGTGGCTAAAGCCCTCGCGCCTCTTTaGTGTGGCTGCGGCGCGCCG +
Preference number: 5 (lower is better)
Translates to: AFLIRLASINGNAIIVAKALAPL*CGCGAP
Trigger: CGGCGCGCCGCAGCCACACAAAAGAGGCGCGAGGGC...TTTAGCCACAATTATTGCATTTCCATTTATTGAGGCTAGCCGTATCAGAAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp GCCTTTCTGATACGGCTAGCCTCAATAAATGGAAATGCAATAATTGTGGCTAAATGCTGTTGGCCGTGGTaGGGACCCGGTGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: AFLIRLASINGNAIIVAKCCWPW*GPGGCC
Trigger: GCAGCAGCCACCGGGTCCCAACCACGGCCAACAGCA...TTTAGCCACAATTATTGCATTTCCATTTATTGAGGCTAGCCGTATCAGAAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp TCTTATTACACTTGCATGTCACTCCTTAGTGCAAACTCACTTTTGCTTTATAGAGCGGCCGCCAGGTCTTaGGCGCGGAGGCTGTGCACG +
Preference number: 5 (lower is better)
Translates to: SYYTCMSLLSANSLLLYRAAARS*ARRLCT
Trigger: CGTGCACAGCCTCCGCGCCAAAGACCTGGCGGCCGC...TCTATAAAGCAAAAGTGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp CTGCATTTCTCTAAGAATGGTCTGGAAAGGGATCTGGCAGGAAATAAAGAATATCCTATCGCGGCCCCCTaGCAAGGGCAGCAGCGCGAA +
Preference number: 5 (lower is better)
Translates to: LHFSKNGLERDLAGNKEYPIAAP*QGQQRE
Trigger: TTCGCGCTGCTGCCCTTGCAAGGGGGCCGCGATAGG...ATATTCTTTATTTCCTGCCAGATCCCTTTCCAGACCATTCTTAGAGAAATGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp AGTGATTTGTCTAAGGTTATACAGATAATAGGTGGATATCCCAGATTTCAGACTCTGCACCGGCTGAGGTaGCTCGGCCGTGGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: SDLSKVIQIIGGYPRFQTLHRLR*LGRGWL
Trigger: GAGCCACCCACGGCCGAGCAACCTCAGCCGGTGCAG...AGTCTGAAATCTGGGATATCCACCTATTATCTGTATAACCTTAGACAAATCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp TGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCACTCTGGGATGGAGGCTaGCACAGGGAGGGCGCCAAC +
Preference number: 5 (lower is better)
Translates to: CTSIVFWLFSGTCFQKISLWDGG*HREGAN
Trigger: GTTGGCGCCCTCCCTGTGCAAGCCTCCATCCCAGAG...TGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp AAATCCTTGGAGTTATCTACAGGAATCTTGTGGACGCAATTCAAGGATAACATTCCACTGCTACTGCTGTaGGCCGTGGTTGGGACCCGG +
Preference number: 5 (lower is better)
Translates to: KSLELSTGILWTQFKDNIPLLLL*AVVGTR
Trigger: CCGGGTCCCAACCACGGCCAACAGCAGTAGCAGTGG...AATGTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAACTCCAAGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGCTCCTGGACCGGTTTTaGCTGCCACTGCTACTGCTG +
Preference number: 5 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTLLDRF*LPLLLL
Trigger: CAGCAGTAGCAGTGGCAGCAAAAACCGGTCCAGGAG...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp AACAACCCCCAAGTTTATGCTGTCTCCAGTCTTTACGGTACATGGATCAACACAAGCAGAGTCTCGCGTTaGACCAGCTACTGCGTCCAA +
Preference number: 5 (lower is better)
Translates to: NNPQVYAVSSLYGTWINTSRVSR*TSYCVQ
Trigger: TTGGACGCAGTAGCTGGTCAAACGCGAGACTCTGCT...TGTGTTGATCCATGTACCGTAAAGACTGGAGACAGCATAAACTTGGGGGTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp GCTGGACATGCGACAATGGTGCTGAGTACTTTGGGGGAAGATCACAACAGTCCTGCCTATTTTCCTCCCTaGTTATTGACAGTCAGCCTT +
Preference number: 5 (lower is better)
Translates to: AGHATMVLSTLGEDHNSPAYFPP*LLTVSL
Trigger: AAGGCTGACTGTCAATAACAAGGGAGGAAAATAGGC...AGGACTGTTGTGATCTTCCCCCAAAGTACTCAGCACCATTGTCGCATGTCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp TCTTATTACACTTGCATGTCACTCCTTAGTGCAAACTCACTTTTGCTTTATAGACCCGCGGAACTGGAGTaGACACCCCCTGGAGCCCTA +
Preference number: 5 (lower is better)
Translates to: SYYTCMSLLSANSLLLYRPAELE*TPPGAL
Trigger: TAGGGCTCCAGGGGGTGTCAACTCCAGTTCCGCGGG...TCTATAAAGCAAAAGTGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp GAGAGACTATGTAACTTGTCCATGGTCACCCAGCTGGTACATGACAGAAATTCATTTTGTGTTCTGCATTaGCTCATGCTGGCCCCACTG +
Preference number: 5 (lower is better)
Translates to: ERLCNLSMVTQLVHDRNSFCVLH*LMLAPL
Trigger: CAGTGGGGCCAGCATGAGCAAATGCAGAACACAAAA...TGAATTTCTGTCATGTACCAGCTGGGTGACCATGGACAAGTTACATAGTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp CTGCATTTCTCTAAGAATGGTCTGGAAAGGGATCTGGCAGGAAATAAAGAATATTTCTTGCGCCTCTTCTaGGCTTTCCGCTTGCGCTTG +
Preference number: 5 (lower is better)
Translates to: LHFSKNGLERDLAGNKEYFLRLF*AFRLRL
Trigger: CAAGCGCAAGCGGAAAGCCAAGAAGAGGCGCAAGAA...ATATTCTTTATTTCCTGCCAGATCCCTTTCCAGACCATTCTTAGAGAAATGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp CTGCATTTCTCTAAGAATGGTCTGGAAAGGGATCTGGCAGGAAATAAAGAATATACCACCACGTCGTTCTaGCGCCTCTTCTTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: LHFSKNGLERDLAGNKEYTTTSF*RLFLAF
Trigger: GAAAGCCAAGAAGAGGCGCAAGAACGACGTGGTGGT...ATATTCTTTATTTCCTGCCAGATCCCTTTCCAGACCATTCTTAGAGAAATGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp AACAACCCCCAAGTTTATGCTGTCTCCAGTCTTTACGGTACATGGATCAACACAATGGTGCTGAGTACTTaGGGGGAAGATCACAACAGT +
Preference number: 5 (lower is better)
Translates to: NNPQVYAVSSLYGTWINTMVLST*GEDHNS
Trigger: ACTGTTGTGATCTTCCCCCAAAGTACTCAGCACCAT...TGTGTTGATCCATGTACCGTAAAGACTGGAGACAGCATAAACTTGGGGGTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp AACAACCCCCAAGTTTATGCTGTCTCCAGTCTTTACGGTACATGGATCAACACAGCCAAGTGTGCCAGTTaGGGCGTTCATTCATTGTTA +
Preference number: 5 (lower is better)
Translates to: NNPQVYAVSSLYGTWINTAKCAS*GVHSLL
Trigger: TAACAATGAATGAACGCCCAAACTGGCACACTTGGC...TGTGTTGATCCATGTACCGTAAAGACTGGAGACAGCATAAACTTGGGGGTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGTTTCCTCCCTTGTTATaGACAGTCAGCCTTCGTGGG +
Preference number: 5 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTFPPLL*TVSLRG
Trigger: CCCACGAAGGCTGACTGTCAATAACAAGGGAGGAAA...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp AGTGATTTGTCTAAGGTTATACAGATAATAGGTGGATATCCCAGATTTCAGACTGAGCACAGCTTCAGCTaGCCTTTCACCACCACCACG +
Preference number: 5 (lower is better)
Translates to: SDLSKVIQIIGGYPRFQTEHSFS*PFTTTT
Trigger: CGTGGTGGTGGTGAAAGGCAAGCTGAAGCTGTGCTC...AGTCTGAAATCTGGGATATCCACCTATTATCTGTATAACCTTAGACAAATCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp TCTACCTACCACAGTGCCTATCTGACTCATGATAGGCAGAGTATAATATATCTGGGACATCCATGGGATTaGAGGAACGAGGAGATTGCA +
Preference number: 5 (lower is better)
Translates to: STYHSAYLTHDRQSIIYLGHPWD*RNEEIA
Trigger: TGCAATCTCCTCGTTCCTCAAATCCCATGGATGTCC...CAGATATATTATACTCTGCCTATCATGAGTCAGATAGGCACTGTGGTAGGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp CTGCATTTCTCTAAGAATGGTCTGGAAAGGGATCTGGCAGGAAATAAAGAATATATGATTTTGGTCTTCTaGTCCCGGTTCTCGTGGAGG +
Preference number: 5 (lower is better)
Translates to: LHFSKNGLERDLAGNKEYMILVF*SRFSWR
Trigger: CCTCCACGAGAACCGGGACAAGAAGACCAAAATCAT...ATATTCTTTATTTCCTGCCAGATCCCTTTCCAGACCATTCTTAGAGAAATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp TGCAAACATGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGACCCCTAAGTCACACTTaGAGCCACTATGCTATGTTG +
Preference number: 5 (lower is better)
Translates to: CKHALQLCFGFSVAHVSRPLSHT*SHYAML
Trigger: CAACATAGCATAGTGGCTCAAAGTGTGACTTAGGGG...TCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp AAATCCTTGGAGTTATCTACAGGAATCTTGTGGACGCAATTCAAGGATAACATTTTCTACCAGGAGGCATaGCAGCAGCATAAGCCCTCA +
Preference number: 5 (lower is better)
Translates to: KSLELSTGILWTQFKDNIFYQEA*QQHKPS
Trigger: TGAGGGCTTATGCTGCTGCAATGCCTCCTGGTAGAA...AATGTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAACTCCAAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp CTGCATTTCTCTAAGAATGGTCTGGAAAGGGATCTGGCAGGAAATAAAGAATATGCACCTGATCTTTACTaGAAGCCTAATAGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: LHFSKNGLERDLAGNKEYAPDLY*KPNRGL
Trigger: CAGCCCCCTATTAGGCTTCAAGTAAAGATCAGGTGC...ATATTCTTTATTTCCTGCCAGATCCCTTTCCAGACCATTCTTAGAGAAATGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp TCTTATTACACTTGCATGTCACTCCTTAGTGCAAACTCACTTTTGCTTTATAGATTCTTGGCTTTCCGCTaGCGCTTGGGTATCTGGCTT +
Preference number: 5 (lower is better)
Translates to: SYYTCMSLLSANSLLLYRFLAFR*RLGIWL
Trigger: AAGCCAGATACCCAAGCGCAAGCGGAAAGCCAAGAA...TCTATAAAGCAAAAGTGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp TCTACCTACCACAGTGCCTATCTGACTCATGATAGGCAGAGTATAATATATCTGGCAGCTCTTTGGATATaGAATGATGTCCTCGGATCA +
Preference number: 5 (lower is better)
Translates to: STYHSAYLTHDRQSIIYLAALWI*NDVLGS
Trigger: TGATCCGAGGACATCATTCAATATCCAAAGAGCTGC...CAGATATATTATACTCTGCCTATCATGAGTCAGATAGGCACTGTGGTAGGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp AAATCCTTGGAGTTATCTACAGGAATCTTGTGGACGCAATTCAAGGATAACATTTACAGGACTAGCGCTTaGCCCAAGGAGACCAAAATG +
Preference number: 5 (lower is better)
Translates to: KSLELSTGILWTQFKDNIYRTSA*PKETKM
Trigger: CATTTTGGTCTCCTTGGGCAAAGCGCTAGTCCTGTA...AATGTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAACTCCAAGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp TGCAAACATGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAAAATGACCTGTGGCTaGATAGAACAACCCCCAAGT +
Preference number: 5 (lower is better)
Translates to: CKHALQLCFGFSVAHVSRKMTCG*IEQPPS
Trigger: ACTTGGGGGTTGTTCTATCAAGCCACAGGTCATTTT...TCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp ACAGTGTTGCCAAGTGACAGATTCTCCTCTCAGTTTTATCTCCTTATACACACGAATACTCATACACATTaGCGACAGTATGTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: TVLPSDRFSSQFYLLIHTNTHTH*RQYVWV
Trigger: GACCCAGACATACTGTCGCAAATGTGTATGAGTATT...CGTGTGTATAAGGAGATAAAACTGAGAGGAGAATCTGTCACTTGGCAACACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp AACAACCCCCAAGTTTATGCTGTCTCCAGTCTTTACGGTACATGGATCAACACAATGCTGCATTACAAGTaGCCACATATCAACTTGGAT +
Preference number: 5 (lower is better)
Translates to: NNPQVYAVSSLYGTWINTMLHYK*PHINLD
Trigger: ATCCAAGTTGATATGTGGCAACTTGTAATGCAGCAT...TGTGTTGATCCATGTACCGTAAAGACTGGAGACAGCATAAACTTGGGGGTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp AGTGATTTGTCTAAGGTTATACAGATAATAGGTGGATATCCCAGATTTCAGACTCGCAGGTTGATGATTTaGGTCTTCTTGTCCCGGTTC +
Preference number: 5 (lower is better)
Translates to: SDLSKVIQIIGGYPRFQTRRLMI*VFLSRF
Trigger: GAACCGGGACAAGAAGACCAAAATCATCAACCTGCG...AGTCTGAAATCTGGGATATCCACCTATTATCTGTATAACCTTAGACAAATCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp GCCTTTCTGATACGGCTAGCCTCAATAAATGGAAATGCAATAATTGTGGCTAAAAATAACCCCCATCTATaGAATACATCCTGTGGGCCA +
Preference number: 5 (lower is better)
Translates to: AFLIRLASINGNAIIVAKNNPHL*NTSCGP
Trigger: TGGCCCACAGGATGTATTCAATAGATGGGGGTTATT...TTTAGCCACAATTATTGCATTTCCATTTATTGAGGCTAGCCGTATCAGAAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp CTGCATTTCTCTAAGAATGGTCTGGAAAGGGATCTGGCAGGAAATAAAGAATATAGAAAGCACAGGTTATaGAGACAGGCCCATACTTTG +
Preference number: 5 (lower is better)
Translates to: LHFSKNGLERDLAGNKEYRKHRL*RQAHTL
Trigger: CAAAGTATGGGCCTGTCTCAATAACCTGTGCTTTCT...ATATTCTTTATTTCCTGCCAGATCCCTTTCCAGACCATTCTTAGAGAAATGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp CTGCATTTCTCTAAGAATGGTCTGGAAAGGGATCTGGCAGGAAATAAAGAATATATGATGCAAACAGTGTaGCCAAGTGACAGATTCTCC +
Preference number: 5 (lower is better)
Translates to: LHFSKNGLERDLAGNKEYMMQTV*PSDRFS
Trigger: GGAGAATCTGTCACTTGGCAACACTGTTTGCATCAT...ATATTCTTTATTTCCTGCCAGATCCCTTTCCAGACCATTCTTAGAGAAATGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp AACAACCCCCAAGTTTATGCTGTCTCCAGTCTTTACGGTACATGGATCAACACAAAACATGCACTTCAATaGTGTTTTGGCTTTTCAGTG +
Preference number: 5 (lower is better)
Translates to: NNPQVYAVSSLYGTWINTKHALQ*CFGFSV
Trigger: CACTGAAAAGCCAAAACACAATTGAAGTGCATGTTT...TGTGTTGATCCATGTACCGTAAAGACTGGAGACAGCATAAACTTGGGGGTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp AGTGATTTGTCTAAGGTTATACAGATAATAGGTGGATATCCCAGATTTCAGACTCTCAGAGTTTGTGACTaGTACAAGGCCTCACAGCTA +
Preference number: 5 (lower is better)
Translates to: SDLSKVIQIIGGYPRFQTLRVCD*YKASQL
Trigger: TAGCTGTGAGGCCTTGTACAAGTCACAAACTCTGAG...AGTCTGAAATCTGGGATATCCACCTATTATCTGTATAACCTTAGACAAATCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp AAATCCTTGGAGTTATCTACAGGAATCTTGTGGACGCAATTCAAGGATAACATTCAAAAGGGCAGAAGCTaGAAACACAGCTGCTTACTA +
Preference number: 5 (lower is better)
Translates to: KSLELSTGILWTQFKDNIQKGRS*KHSCLL
Trigger: TAGTAAGCAGCTGTGTTTCAAGCTTCTGCCCTTTTG...AATGTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAACTCCAAGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp TGCAAACATGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAACCTTTCCCAGCTTTTaGTACCTATCTGACATTTTC +
Preference number: 5 (lower is better)
Translates to: CKHALQLCFGFSVAHVSRTFPSF*YLSDIF
Trigger: GAAAATGTCAGATAGGTACAAAAAGCTGGGAAAGGT...TCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCAGCTGCATCTATACTTaGCTATTCTGGCCAAATCTG +
Preference number: 5 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLSCIYT*LFWPNL
Trigger: CAGATTTGGCCAGAATAGCAAAGTATAGATGCAGCT...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp CTGCATTTCTCTAAGAATGGTCTGGAAAGGGATCTGGCAGGAAATAAAGAATATCACTTCAATTGTGTTTaGGCTTTTCAGTGGCACATG +
Preference number: 5 (lower is better)
Translates to: LHFSKNGLERDLAGNKEYHFNCV*AFQWHM
Trigger: CATGTGCCACTGAAAAGCCAAAACACAATTGAAGTG...ATATTCTTTATTTCCTGCCAGATCCCTTTCCAGACCATTCTTAGAGAAATGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp GTTTTGGCTTTTCAGTGGCACATGTTTCCAGAAGATATCAGTCAATTTACTCTCTTCTGTGGTCAGAAATaGTGTCTTTCACAGACACAA +
Preference number: 5 (lower is better)
Translates to: VLAFQWHMFPEDISQFTLFCGQK*CLSQTQ
Trigger: TTGTGTCTGTGAAAGACACAATTTCTGACCACAGAA...GAGAGTAAATTGACTGATATCTTCTGGAAACATGTGCCACTGAAAAGCCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp TGCAAACATGCACTTCAATTGTGTTTTGGCTTTTCAGTGGCACATGTTTCCAGAACTCAGCTGGAAGATTaGTATCATAACTCTCTTGTA +
Preference number: 5 (lower is better)
Translates to: CKHALQLCFGFSVAHVSRTQLED*YHNSLV
Trigger: TACAAGAGAGTTATGATACAAATCTTCCAGCTGAGT...TCTGGAAACATGTGCCACTGAAAAGCCAAAACACAATTGAAGTGCATGTTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp TCTTATTACACTTGCATGTCACTCCTTAGTGCAAACTCACTTTTGCTTTATAGAATGATGAGTTTCTCCTaGTTTGTAAACTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: SYYTCMSLLSANSLLLYRMMSFS*FVNCLC
Trigger: GCAGAGGCAGTTTACAAACAAGGAGAAACTCATCAT...TCTATAAAGCAAAAGTGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp AAATCCTTGGAGTTATCTACAGGAATCTTGTGGACGCAATTCAAGGATAACATTTTATCTACAGGAATCTaGTGGACGCAATTCAAGGAT +
Preference number: 5 (lower is better)
Translates to: KSLELSTGILWTQFKDNILSTGI*WTQFKD
Trigger: ATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAA...AATGTTATCCTTGAATTGCGTCCACAAGATTCCTGTAGATAACTCCAAGGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp CTGCATTTCTCTAAGAATGGTCTGGAAAGGGATCTGGCAGGAAATAAAGAATATTTCATGCTTTTGGCTTaGACTTCAGTTAGTAACATC +
Preference number: 5 (lower is better)
Translates to: LHFSKNGLERDLAGNKEYFMLLA*TSVSNI
Trigger: GATGTTACTAACTGAAGTCAAAGCCAAAAGCATGAA...ATATTCTTTATTTCCTGCCAGATCCCTTTCCAGACCATTCTTAGAGAAATGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp GCCTTTCTGATACGGCTAGCCTCAATAAATGGAAATGCAATAATTGTGGCTAAACCAAGATTTGGAAAATaGAGCTCATCTTTGTCTATC +
Preference number: 5 (lower is better)
Translates to: AFLIRLASINGNAIIVAKPRFGK*SSSLSI
Trigger: GATAGACAAAGATGAGCTCAATTTTCCAAATCTTGG...TTTAGCCACAATTATTGCATTTCCATTTATTGAGGCTAGCCGTATCAGAAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp TCTTATTACACTTGCATGTCACTCCTTAGTGCAAACTCACTTTTGCTTTATAGAAGAGTTGCAGGTAGTTaGACTAAAGTTGGACTCCTT +
Preference number: 5 (lower is better)
Translates to: SYYTCMSLLSANSLLLYRRVAGS*TKVGLL
Trigger: AAGGAGTCCAACTTTAGTCAAACTACCTGCAACTCT...TCTATAAAGCAAAAGTGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp TCTTATTACACTTGCATGTCACTCCTTAGTGCAAACTCACTTTTGCTTTATAGAGTGGGGTGTCTTAGATaGTTTTTCAGAGTTAGTCAT +
Preference number: 5 (lower is better)
Translates to: SYYTCMSLLSANSLLLYRVGCLR*FFRVSH
Trigger: ATGACTAACTCTGAAAAACAATCTAAGACACCCCAC...TCTATAAAGCAAAAGTGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp AGTGATTTGTCTAAGGTTATACAGATAATAGGTGGATATCCCAGATTTCAGACTTCATCTGAAAGCAATTaGTGTAGTTTACCAAAAGGG +
Preference number: 5 (lower is better)
Translates to: SDLSKVIQIIGGYPRFQTSSESN*CSLPKG
Trigger: CCCTTTTGGTAAACTACACAAATTGCTTTCAGATGA...AGTCTGAAATCTGGGATATCCACCTATTATCTGTATAACCTTAGACAAATCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS-3UTR CAA 90 bp TCTTATTACACTTGCATGTCACTCCTTAGTGCAAACTCACTTTTGCTTTATAGATTTATTTGCCAAGTGTaGCATTTAATTGCCACTGAC +
Preference number: 5 (lower is better)
Translates to: SYYTCMSLLSANSLLLYRFICQV*HLIATD
Trigger: GTCAGTGGCAATTAAATGCAACACTTGGCAAATAAA...TCTATAAAGCAAAAGTGAGTTTGCACTAAGGAGTGACATGCAAGTGTAATAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS GCA 72 bp ACGGCGGCGCCCGGTAGTCCGGGAGCCCGCTGGTGCTaGGGCGCCGCAAGGCCGCGTACCTGCCGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: TAAPGSPGARWC*GAARPRTCRSW
Trigger: CCAGGACCGGCAGGTACGCGGCCTTGCGGCGCCGCAGCACCAGCGGGCTCCCGGACTACCGGGCGCCGCCGT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 72 bp CGCTCGGCGCCGCGGGGTGAGGAGGCCACGAGCCCTTaGCCAGCATCGCCGCCGCTCCGAAGGCGTCCCCGG +
Preference number: 6 (lower is better)
Translates to: RSAPRGEEATSP*PASPPLRRRPR
Trigger: CCGGGGACGCCTTCGGAGCGGCGGCGATGCTGGCCAAGGGCTCGTGGCCTCCTCACCCCGCGGCGCCGAGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CAA 72 bp GCGGCCGCGGCGGCGGCCGCGGCGGCCGCCAGGTCTTaGGCGCGGAGGCTGTGCACGTCGATGACGGTGGAG +
Preference number: 6 (lower is better)
Translates to: AAAAAAAAAARS*ARRLCTSMTVE
Trigger: CTCCACCGTCATCGACGTGCACAGCCTCCGCGCCAAAGACCTGGCGGCCGCCGCGGCCGCCGCCGCGGCCGC
79% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS GCA 72 bp GGGATCTCCTGGGAGCCGCGTTCCCCCGGAGGCCTCTaGCAGCTGCAGCTCGCGCCCTCCGCGTCCCCGCCC +
Preference number: 6 (lower is better)
Translates to: GISWEPRSPGGL*QLQLAPSASPP
Trigger: GGGCGGGGACGCGGAGGGCGCGAGCTGCAGCTGGCAGAGGCCTCCGGGGGAACGCGGCTCCCAGGAGATCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS GCA 72 bp CACGGACGTGGAGGAGGAGGACGGGGAGGCGGCTCGTaGTGGAGGCGTGCTCCTGGGCGCGCCCGCGGAACT +
Preference number: 6 (lower is better)
Translates to: HGRGGGGRGGGS*WRRAPGRARGT
Trigger: AGTTCCGCGGGCGCGCCCAGGAGCACGCCTCCAGCACGAGCCGCCTCCCCGTCCTCCTCCTCCACGTCCGTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS GCA 72 bp CTCCGGCTCCCGGCGCGCCCCGCGCATGCTGCCCTCTaGGCCGCGGAGGTTGGTCATGCTCAGGTCGAGCTC +
Preference number: 6 (lower is better)
Translates to: LRLPARPAHAAL*AAEVGHAQVEL
Trigger: GAGCTCGACCTGAGCATGACCAACCTCCGCGGCGCAGAGGGCAGCATGCGCGGGGCGCGCCGGGAGCCGGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 72 bp GGACGTGGAGGAGGAGGACGGGGAGGCGGCTCGTGCTaGAGGCGTGCTCCTGGGCGCGCCCGCGGAACTGGA +
Preference number: 6 (lower is better)
Translates to: GRGGGGRGGGSC*RRAPGRARGTG
Trigger: TCCAGTTCCGCGGGCGCGCCCAGGAGCACGCCTCCAGCACGAGCCGCCTCCCCGTCCTCCTCCTCCACGTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS GCA 72 bp GTGGGTGGCTCCTGGCTGGCACCCTCCGGCGAGCTCTaGTCCGCACCCAGAACGGGGGCGGCCACAGCAGAG +
Preference number: 6 (lower is better)
Translates to: VGGSWLAPSGEL*SAPRTGAATAE
Trigger: CTCTGCTGTGGCCGCCCCCGTTCTGGGTGCGGAGCAGAGCTCGCCGGAGGGTGCCAGCCAGGAGCCACCCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 72 bp CTCAGCGAGGAGTCCACGAAGGAGCTGGCCGTGCTCTaGCGCCCCCAGCTCTCGGGTGGGCTGCAGGGCGCC +
Preference number: 6 (lower is better)
Translates to: LSEESTKELAVL*RPQLSGGLQGA
Trigger: GGCGCCCTGCAGCCCACCCGAGAGCTGGGGGCGCCAGAGCACGGCCAGCTCCTTCGTGGACTCCTCGCTGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 72 bp GCGCGAAGGCGCTCAGCGAGGAGTCCACGAAGGAGCTaGCCGTGCTCTGGCGCCCCCAGCTCTCGGGTGGGC +
Preference number: 6 (lower is better)
Translates to: ARRRSARSPRRS*PCSGAPSSRVG
Trigger: GCCCACCCGAGAGCTGGGGGCGCCAGAGCACGGCCAGCTCCTTCGTGGACTCCTCGCTGAGCGCCTTCGCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CAA 72 bp CGCGCCCCGCGCATGCTGCCCTCTGCGCCGCGGAGGTaGGTCATGCTCAGGTCGAGCTCGCCCCTCGGGATC +
Preference number: 6 (lower is better)
Translates to: RAPRMLPSAPRR*VMLRSSSPLGI
Trigger: GATCCCGAGGGGCGAGCTCGACCTGAGCATGACCAACCTCCGCGGCGCAGAGGGCAGCATGCGCGGGGCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS GCA 72 bp AGGCGCTCAGCGAGGAGTCCACGAAGGAGCTGGCCGTaGTCTGGCGCCCCCAGCTCTCGGGTGGGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: RRSARSPRRSWP*SGAPSSRVGCR
Trigger: CCTGCAGCCCACCCGAGAGCTGGGGGCGCCAGAGCACGGCCAGCTCCTTCGTGGACTCCTCGCTGAGCGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 72 bp GCGCCCCGCGCATGCTGCCCTCTGCGCCGCGGAGGTTaGTCATGCTCAGGTCGAGCTCGCCCCTCGGGATCT +
Preference number: 6 (lower is better)
Translates to: APRACCPLRRGG*SCSGRARPSGS
Trigger: AGATCCCGAGGGGCGAGCTCGACCTGAGCATGACCAACCTCCGCGGCGCAGAGGGCAGCATGCGCGGGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 72 bp CCGGCTGAGGTTGCTCGGCCGTGGGTGGCTCCTGGCTaGCACCCTCCGGCGAGCTCTGCTCCGCACCCAGAA +
Preference number: 6 (lower is better)
Translates to: PAEVARPWVAPG*HPPASSAPHPE
Trigger: TTCTGGGTGCGGAGCAGAGCTCGCCGGAGGGTGCCAGCCAGGAGCCACCCACGGCCGAGCAACCTCAGCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 72 bp CTGCCTCTGCACCGGCTGAGGTTGCTCGGCCGTGGGTaGCTCCTGGCTGGCACCCTCCGGCGAGCTCTGCTC +
Preference number: 6 (lower is better)
Translates to: LPLHRLRLLGRG*LLAGTLRRALL
Trigger: GAGCAGAGCTCGCCGGAGGGTGCCAGCCAGGAGCCACCCACGGCCGAGCAACCTCAGCCGGTGCAGAGGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CAA 72 bp GGAGGCGTGCTCCTGGGCGCGCCCGCGGAACTGGAGTaGACACCCCCTGGAGCCCTAGGGTGGCTCCTGGAC +
Preference number: 6 (lower is better)
Translates to: GGVLLGAPAELE*TPPGALGWLLD
Trigger: GTCCAGGAGCCACCCTAGGGCTCCAGGGGGTGTCAACTCCAGTTCCGCGGGCGCGCCCAGGAGCACGCCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS GCA 72 bp CGCGCATGCTGCCCTCTGCGCCGCGGAGGTTGGTCATaGTCAGGTCGAGCTCGCCCCTCGGGATCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: RACCPLRRGGWS*SGRARPSGSPG
Trigger: CCCAGGAGATCCCGAGGGGCGAGCTCGACCTGAGCATGACCAACCTCCGCGGCGCAGAGGGCAGCATGCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 72 bp GTCATGCTCAGGTCGAGCTCGCCCCTCGGGATCTCCTaGGAGCCGCGTTCCCCCGGAGGCCTCTGCCAGCTG +
Preference number: 6 (lower is better)
Translates to: VMLRSSSPLGIS*EPRSPGGLCQL
Trigger: CAGCTGGCAGAGGCCTCCGGGGGAACGCGGCTCCCAGGAGATCCCGAGGGGCGAGCTCGACCTGAGCATGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CAA 90 bp GCTCGTGCTGGAGGCGTGCTCCTGGGCGCGCCCGCGGAACTGGAGTaGACACCCCCTGGAGCCCTAGGGTGGCTCCTGGACCGGTTTTTG +
Preference number: 6 (lower is better)
Translates to: ARAGGVLLGAPAELE*TPPGALGWLLDRFL
Trigger: CAAAAACCGGTCCAGGAGCCACCCTAGGGCTCCAGGGGGTGTCAACTCCAGTTCCGCGGGCGCGCCCAGGAGCACGCCTCCAGCACGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CAA 90 bp CTGCTCCGCACCCAGAACGGGGGCGGCCACAGCAGAGTCTCGCGTTaGACCAGCTACTGCGTCCAAGACCGACTCGGTGGAGGTGCCGGC +
Preference number: 6 (lower is better)
Translates to: LLRTQNGGGHSRVSR*TSYCVQDRLGGGAG
Trigger: GCCGGCACCTCCACCGAGTCGGTCTTGGACGCAGTAGCTGGTCAAACGCGAGACTCTGCTGTGGCCGCCCCCGTTCTGGGTGCGGAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 72 bp CCTGGGCGCGCCCGCGGAACTGGAGTTGACACCCCCTaGAGCCCTAGGGTGGCTCCTGGACCGGTTTTTGCT +
Preference number: 6 (lower is better)
Translates to: PGRARGTGVDTP*SPRVAPGPVFA
Trigger: AGCAAAAACCGGTCCAGGAGCCACCCTAGGGCTCCAGGGGGTGTCAACTCCAGTTCCGCGGGCGCGCCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS GCA 72 bp AGGTGCCGGCCTCCCGCAGGGGTGTGTAGCCCTTATTaGTGCTGGATGGGTCATCCGACTGGGAGCTCCCGG +
Preference number: 6 (lower is better)
Translates to: RCRPPAGVCSPY*CWMGHPTGSSR
Trigger: CCGGGAGCTCCCAGTCGGATGACCCATCCAGCAGCAATAAGGGCTACACACCCCTGCGGGAGGCCGGCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS GCA 72 bp GGCGGCCACAGCAGAGTCTCGCGTTTGACCAGCTACTaGGTCCAAGACCGACTCGGTGGAGGTGCCGGCCTC +
Preference number: 6 (lower is better)
Translates to: GGHSRVSRLTSY*VQDRLGGGAGL
Trigger: GAGGCCGGCACCTCCACCGAGTCGGTCTTGGACGCAGTAGCTGGTCAAACGCGAGACTCTGCTGTGGCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 72 bp TCCCGGTGGCCTTGGGCCAGTAGCCCACCACCGCCATaGCTATGCCCACCAGCAGCACCAGGATCCCACAGA +
Preference number: 6 (lower is better)
Translates to: SRWPWASSPPPP*LCPPAAPGSHR
Trigger: TCTGTGGGATCCTGGTGCTGCTGGTGGGCATAGCCATGGCGGTGGTGGGCTACTGGCCCAAGGCCACCGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 72 bp CGGCCTCCCGCAGGGGTGTGTAGCCCTTATTGCTGCTaGATGGGTCATCCGACTGGGAGCTCCCGGAGTCCC +
Preference number: 6 (lower is better)
Translates to: RPPAGVCSPYCC*MGHPTGSSRSP
Trigger: GGGACTCCGGGAGCTCCCAGTCGGATGACCCATCCAGCAGCAATAAGGGCTACACACCCCTGCGGGAGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS TCA 72 bp CCCAGAACGGGGGCGGCCACAGCAGAGTCTCGCGTTTaGCCAGCTACTGCGTCCAAGACCGACTCGGTGGAG +
Preference number: 6 (lower is better)
Translates to: PRTGAATAESRV*PATASKTDSVE
Trigger: CTCCACCGAGTCGGTCTTGGACGCAGTAGCTGGTCAAACGCGAGACTCTGCTGTGGCCGCCCCCGTTCTGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS GCA 72 bp GGTGGCTCCTGGACCGGTTTTTGCTGCCACTGCTACTaGTGTTGGCCGTGGTTGGGACCCGGTGGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: GGSWTGFCCHCY*CWPWLGPGGCC
Trigger: GCAGCAGCCACCGGGTCCCAACCACGGCCAACAGCAGTAGCAGTGGCAGCAAAAACCGGTCCAGGAGCCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS GCA 72 bp TGCCGGCCTCCCGCAGGGGTGTGTAGCCCTTATTGCTaGTGGATGGGTCATCCGACTGGGAGCTCCCGGAGT +
Preference number: 6 (lower is better)
Translates to: CRPPAGVCSPYC*WMGHPTGSSRS
Trigger: ACTCCGGGAGCTCCCAGTCGGATGACCCATCCAGCAGCAATAAGGGCTACACACCCCTGCGGGAGGCCGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS GCA 72 bp GACCAGCTACTGCGTCCAAGACCGACTCGGTGGAGGTaGCGGCCTCCCGCAGGGGTGTGTAGCCCTTATTGC +
Preference number: 6 (lower is better)
Translates to: DQLLRPRPTRWR*RPPAGVCSPYC
Trigger: GCAATAAGGGCTACACACCCCTGCGGGAGGCCGGCACCTCCACCGAGTCGGTCTTGGACGCAGTAGCTGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 72 bp AGCCAGAGAAGATGCGGAAGAAGAAGCCCACGGACGTaGAGGAGGAGGACGGGGAGGCGGCTCGTGCTGGAG +
Preference number: 6 (lower is better)
Translates to: SQRRCGRRSPRT*RRRTGRRLVLE
Trigger: CTCCAGCACGAGCCGCCTCCCCGTCCTCCTCCTCCACGTCCGTGGGCTTCTTCTTCCGCATCTTCTCTGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CCA 72 bp CTTAGCAGGCCGCCGGTGGCGATCATGGCGAGCTCCTaGAGTGCAGGACTAGCCTCTGGGATGGAGGCTTGC +
Preference number: 6 (lower is better)
Translates to: LSRPPVAIMASS*SAGLASGMEAC
Trigger: GCAAGCCTCCATCCCAGAGGCTAGTCCTGCACTCCAGGAGCTCGCCATGATCGCCACCGGCGGCCTGCTAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS CAA 72 bp CCCCCTGGAGCCCTAGGGTGGCTCCTGGACCGGTTTTaGCTGCCACTGCTACTGCTGTTGGCCGTGGTTGGG +
Preference number: 6 (lower is better)
Translates to: PPGALGWLLDRF*LPLLLLLAVVG
Trigger: CCCAACCACGGCCAACAGCAGTAGCAGTGGCAGCAAAAACCGGTCCAGGAGCCACCCTAGGGCTCCAGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CAA 90 bp GAGTTGACACCCCCTGGAGCCCTAGGGTGGCTCCTGGACCGGTTTTaGCTGCCACTGCTACTGCTGTTGGCCGTGGTTGGGACCCGGTGG +
Preference number: 6 (lower is better)
Translates to: ELTPPGALGWLLDRF*LPLLLLLAVVGTRW
Trigger: CCACCGGGTCCCAACCACGGCCAACAGCAGTAGCAGTGGCAGCAAAAACCGGTCCAGGAGCCACCCTAGGGCTCCAGGGGGTGTCAACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CAA 90 bp CATGGCGAGCTCCTGGAGTGCAGGACTAGCCTCTGGGATGGAGGCTaGCACAGGGAGGGCGCCAACTGCCCACTAGCTGCTCAGCCACCT +
Preference number: 6 (lower is better)
Translates to: HGELLECRTSLWDGG*HREGANCPLAAQPP
Trigger: AGGTGGCTGAGCAGCTAGTGGGCAGTTGGCGCCCTCCCTGTGCAAGCCTCCATCCCAGAGGCTAGTCCTGCACTCCAGGAGCTCGCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS CCA 72 bp GATCATGGCGAGCTCCTGGAGTGCAGGACTAGCCTCTaGGATGGAGGCTTGCACAGGGAGGGCGCCAACTGC +
Preference number: 6 (lower is better)
Translates to: DHGELLECRTSL*DGGLHREGANC
Trigger: GCAGTTGGCGCCCTCCCTGTGCAAGCCTCCATCCCAGAGGCTAGTCCTGCACTCCAGGAGCTCGCCATGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS CAA 72 bp ACCCAGAACGGGGGCGGCCACAGCAGAGTCTCGCGTTaGACCAGCTACTGCGTCCAAGACCGACTCGGTGGA +
Preference number: 6 (lower is better)
Translates to: TQNGGGHSRVSR*TSYCVQDRLGG
Trigger: TCCACCGAGTCGGTCTTGGACGCAGTAGCTGGTCAAACGCGAGACTCTGCTGTGGCCGCCCCCGTTCTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CAA 72 bp CTCCTTGTTTGTAAACTGCCTCTGCACCGGCTGAGGTaGCTCGGCCGTGGGTGGCTCCTGGCTGGCACCCTC +
Preference number: 6 (lower is better)
Translates to: LLVCKLPLHRLR*LGRGWLLAGTL
Trigger: GAGGGTGCCAGCCAGGAGCCACCCACGGCCGAGCAACCTCAGCCGGTGCAGAGGCAGTTTACAAACAAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CAA 72 bp CTCCTGGAGTGCAGGACTAGCCTCTGGGATGGAGGCTaGCACAGGGAGGGCGCCAACTGCCCACTAGCTGCT +
Preference number: 6 (lower is better)
Translates to: LLECRTSLWDGG*HREGANCPLAA
Trigger: AGCAGCTAGTGGGCAGTTGGCGCCCTCCCTGTGCAAGCCTCCATCCCAGAGGCTAGTCCTGCACTCCAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581347.2
CDS CAA 90 bp GATGAGTTTCTCCTTGTTTGTAAACTGCCTCTGCACCGGCTGAGGTaGCTCGGCCGTGGGTGGCTCCTGGCTGGCACCCTCCGGCGAGCT +
Preference number: 6 (lower is better)
Translates to: DEFLLVCKLPLHRLR*LGRGWLLAGTLRRA
Trigger: AGCTCGCCGGAGGGTGCCAGCCAGGAGCCACCCACGGCCGAGCAACCTCAGCCGGTGCAGAGGCAGTTTACAAACAAGGAGAAACTCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS TCA 72 bp CAGCAGCACCAGGATCCCACAGAGGGCGATGAGCCCTaGGATGGAGCACAGCTTCAGCTTGCCTTTCACCAC +
Preference number: 6 (lower is better)
Translates to: QQHQDPTEGDEP*DGAQLQLAFHH
Trigger: GTGGTGAAAGGCAAGCTGAAGCTGTGCTCCATCTCAGGGCTCATCGCCCTCTGTGGGATCCTGGTGCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS TCA 72 bp AGTTTCTCCTTGTTTGTAAACTGCCTCTGCACCGGCTaGGGTTGCTCGGCCGTGGGTGGCTCCTGGCTGGCA +
Preference number: 6 (lower is better)
Translates to: SFSLFVNCLCTG*GCSAVGGSWLA
Trigger: TGCCAGCCAGGAGCCACCCACGGCCGAGCAACCTCAGCCGGTGCAGAGGCAGTTTACAAACAAGGAGAAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CAA 90 bp ATCCCACAGAGGGCGATGAGCCCTGAGATGGAGCACAGCTTCAGCTaGCCTTTCACCACCACCACGTCGTTCTTGCGCCTCTTCTTGGCT +
Preference number: 6 (lower is better)
Translates to: IPQRAMSPEMEHSFS*PFTTTTSFLRLFLA
Trigger: AGCCAAGAAGAGGCGCAAGAACGACGTGGTGGTGGTGAAAGGCAAGCTGAAGCTGTGCTCCATCTCAGGGCTCATCGCCCTCTGTGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS GCA 72 bp GCTTCAGCTTGCCTTTCACCACCACCACGTCGTTCTTaGGCCTCTTCTTGGCTTTCCGCTTGCGCTTGGGTA +
Preference number: 6 (lower is better)
Translates to: ASACLSPPPRRS*ASSWLSACAWV
Trigger: TACCCAAGCGCAAGCGGAAAGCCAAGAAGAGGCGCAAGAACGACGTGGTGGTGGTGAAAGGCAAGCTGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS GCA 72 bp GGTCTTCTTGTCCCGGTTCTCGTGGAGGACCGCGTTTaGGCAGATGAAGAGGAAGATGCCGATGCCCATGAT +
Preference number: 6 (lower is better)
Translates to: GLLVPVLVEDRV*ADEEEDADAHD
Trigger: ATCATGGGCATCGGCATCTTCCTCTTCATCTGCGCAAACGCGGTCCTCCACGAGAACCGGGACAAGAAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2
CDS CAA 90 bp ATGGAGCACAGCTTCAGCTTGCCTTTCACCACCACCACGTCGTTCTaGCGCCTCTTCTTGGCTTTCCGCTTGCGCTTGGGTATCTGGCTT +
Preference number: 6 (lower is better)
Translates to: MEHSFSLPFTTTTSF*RLFLAFRLRLGIWL
Trigger: AAGCCAGATACCCAAGCGCAAGCGGAAAGCCAAGAAGAGGCGCAAGAACGACGTGGTGGTGGTGAAAGGCAAGCTGAAGCTGTGCTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383490.2
ENST00000581347.2