RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM200A (Homo sapiens)

Ensembl gene IDs: ENSG00000164484

Ensembl transcript IDs: ENST00000296978.4, ENST00000392429.1, ENST00000545622.5, ENST00000617887.4

Found 350 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AATCACATCCTAAGGTTTGCACTCATAGTCATCTATAATACGTATTaGGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTAC +
Preference number: 1 (lower is better)
Translates to: NHILRFALIVIYNTY*VLGLNLYSWSTLWY
Trigger: GTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATACGTATTATAGATGACTATGAGTGCAAACCTTAGGATGTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
3UTR-3UTR CCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAAATCCCTAAGTATATCTaGCACTGTCAGCCATGGCTC +
Preference number: 2 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQIPKYI*HCQPWL
Trigger: GAGCCATGGCTGACAGTGCCAGATATACTTAGGGAT...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
3UTR-3UTR CCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACACTGAATTTGTACTCCTaGTCCACACTTTGGTACCCT +
Preference number: 2 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTLNLYS*STLWYP
Trigger: AGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAG...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
3UTR-3UTR TCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACAATTGAGTATTGGGACTaGATTTGTACTCCTGGTCCA +
Preference number: 2 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTIEYWD*ICTPGP
Trigger: TGGACCAGGAGTACAAATTCAGTCCCAATACTCAAT...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
3UTR-3UTR TCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACAGTCAGCCATGGCTCTTaGATACGTTGTTTCTTGATA +
Preference number: 2 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTVSHGS*IRCFLI
Trigger: TATCAAGAAACAACGTATTCAAGAGCCATGGCTGAC...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
3UTR-3UTR CAA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGCTCCTGGTCCACACTTaGGTACCCTATGTTTTCCAT +
Preference number: 3 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRLLVHT*VPYVFH
Trigger: ATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAG...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
3UTR-3UTR CAA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGGGGAATGAGGTGCTATaGGACAGTAACAGATGGCTA +
Preference number: 3 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRGNEVL*DSNRWL
Trigger: TAGCCATCTGTTACTGTCCAATAGCACCTCATTCCC...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
3UTR-3UTR CAA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAACTCCTGGTCCACACTTaGGTACCCTATGTTTTCCAT +
Preference number: 3 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQLLVHT*VPYVFH
Trigger: ATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAG...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
3UTR-3UTR CAA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGGTATTGGGACTGAATTaGTACTCCTGGTCCACACTT +
Preference number: 3 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRVLGLN*YSWSTL
Trigger: AAGTGTGGACCAGGAGTACAAATTCAGTCCCAATAC...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
3UTR-3UTR CAA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACACTCCTGGTCCACACTTaGGTACCCTATGTTTTCCAT +
Preference number: 3 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTLLVHT*VPYVFH
Trigger: ATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAG...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
3UTR TCA 72 bp CTAAGGTTTGCACTCATAGTCATCTATAATACGTATTaGGTATTGGGACTGAATTTGTACTCCTGGTCCACA +
Preference number: 3 (lower is better)
Translates to: LRFALIVIYNTY*VLGLNLYSWST
Trigger: TGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATACGTATTATAGATGACTATGAGTGCAAACCTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
3UTR CCA 72 bp TATAATTGCATTTTGATGTTTATCCCTAAGTATATCTaGCACTGTCAGCCATGGCTCTTGAATACGTTGTTT +
Preference number: 3 (lower is better)
Translates to: YNCILMFIPKYI*HCQPWLLNTLF
Trigger: AAACAACGTATTCAAGAGCCATGGCTGACAGTGCCAGATATACTTAGGGATAAACATCAAAATGCAATTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGCAGGGGATGCGCCGCTaGCGGTGCTCACAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILQGMRR*RCSQRA
Trigger: GGCCCTCTGTGAGCACCGGCAGCGGCGCATCCCCTG...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296978.4
CDS-3UTR CCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATCTGAGCACCGGGCCCTaGGGGTCGGGTCGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYLSTGP*GSGRLS
Trigger: GGAGAGGCGACCCGACCCCCAGGGCCCGGTGCTCAG...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296978.4
ENST00000617887.4
CDS-3UTR CCA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCAGGCGAGGGGGCGGGTaGCAAGGGGTGCAAGCGGAC +
Preference number: 4 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFRRGGG*QGVQAD
Trigger: GTCCGCTTGCACCCCTTGCCACCCGCCCCCTCGCCT...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296978.4
CDS-3UTR CCA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCGACGTCGGGCGCCTCTaGAGGCGGACGAAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFDVGRL*RRTKKA
Trigger: CGCCTTCTTCGTCCGCCTCCAGAGGCGCCCGACGTC...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296978.4
ENST00000617887.4
CDS-3UTR CCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGACGTCGGGCGCCTCTaGAGGCGGACGAAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYDVGRL*RRTKKA
Trigger: CGCCTTCTTCGTCCGCCTCCAGAGGCGCCCGACGTC...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296978.4
ENST00000617887.4
CDS-3UTR TCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATCCCGGGGCCGGCGCCTaGTGGGCTTCTTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYPGAGA*WASSLG
Trigger: CCCAAGAGAAGAAGCCCATCAGGCGCCGGCCCCGGG...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAACCCGGGGCCGGCGCCTaGTGGGCTTCTTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQPGAGA*WASSLG
Trigger: CCCAAGAGAAGAAGCCCATCAGGCGCCGGCCCCGGG...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACACAAGCGGACGGAGGGTaGGGGCGCCCCTATGCCCGC +
Preference number: 4 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTQADGG*GRPYAR
Trigger: GCGGGCATAGGGGCGCCCCCACCCTCCGTCCGCTTG...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000296978.4
CDS-3UTR TCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACACCCGGGGCCGGCGCCTaGTGGGCTTCTTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTPGAGA*WASSLG
Trigger: CCCAAGAGAAGAAGCCCATCAGGCGCCGGCCCCGGG...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCAACAACCACAACATCTaGCCGGGGCCGGCGCCTGAT +
Preference number: 4 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFNNHNI*PGPAPD
Trigger: ATCAGGCGCCGGCCCCGGGCAGATGTTGTGGTTGTT...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATAACAACCACAACATCTaGCCGGGGCCGGCGCCTGAT +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYNNHNI*PGPAPD
Trigger: ATCAGGCGCCGGCCCCGGGCAGATGTTGTGGTTGTT...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATCCTTTTACTCTGTCCTaGGCACCGGGCCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYPFTLS*APGPGG
Trigger: ACCCCCAGGGCCCGGTGCTCAGGACAGAGTAAAAGG...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000617887.4
CDS-3UTR GCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGATCTGGCAGAGTCTTaGCTTTTCAAGGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILDLAES*LFKAAR
Trigger: CCTGGCCGCCTTGAAAAGGCAAGACTCTGCCAGATC...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGGGCTGAGGTTGACATaGTGCTGTGATCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILGLRLT*CCDLAE
Trigger: CTCTGCCAGATCACAGCAGCATGTCAACCTCAGCCC...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGTCAGCCATTCTACCCTaGTCAAGCCCAGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILSAILP*SSPDRG
Trigger: GCCTCTGTCTGGGCTTGACCAGGGTAGAATGGCTGA...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR TCA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCTTGGTAGCACTGTGCTaGCGGGCTGGAAGGATTCAC +
Preference number: 4 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFLVALC*RAGRIH
Trigger: GTGAATCCTTCCAGCCCGTCAGCACAGTGCTACCAA...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAAAACAACCACAACATCTaGCCGGGGCCGGCGCCTGAT +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQNNHNI*PGPAPD
Trigger: ATCAGGCGCCGGCCCCGGGCAGATGTTGTGGTTGTT...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCATGGGCTTCTTCTCTTaGGTAGCAGGAGACGGGCTG +
Preference number: 4 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFMGFFS*VAGDGL
Trigger: CAGCCCGTCTCCTGCTACCCAAGAGAAGAAGCCCAT...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGACCCAAACTGTCTTCTaGCAGCCCCAGGAGACAAGA +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILTQTVF*QPQETR
Trigger: TCTTGTCTCCTGGGGCTGCCAGAAGACAGTTTGGGT...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGCCTGAACAGTTAGAGTaGAGGGACCCCGGTCTAAGT +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILPEQLE*RDPGLS
Trigger: ACTTAGACCGGGGTCCCTCCACTCTAACTGTTCAGG...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGTGCCAATCCCCATGGTaGATGGGCCAAGCATTTTCA +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILCQSPW*MGQAFS
Trigger: TGAAAATGCTTGGCCCATTCACCATGGGGATTGGCA...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGTCCCAATGTAGACCCTaGGAGGAAAGCAAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILSQCRP*EESKGE
Trigger: CTCACCTTTGCTTTCCTCTCAGGGTCTACATTGGGA...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR TCA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCAAAGCCTTCTCTAGCTaGCCCACTGCACCCTATGCA +
Preference number: 4 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFKAFSS*PTAPYA
Trigger: TGCATAGGGTGCAGTGGGTCAGCTAGAGAAGGCTTT...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR GCA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGGGGCTGAGGTTGACATaGTGCTGTGATCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRGLRLT*CCDLAE
Trigger: CTCTGCCAGATCACAGCAGCATGTCAACCTCAGCCC...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGGCGATCGTATTTGCTaGCAATCTCGAGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYGDRIC*QSRGTG
Trigger: TCCTGTGCCTCGAGATTGGCAGCAAATACGATCGCC...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGATGGGCTTCTTCTCTTaGGTAGCAGGAGACGGGCTG +
Preference number: 4 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRMGFFS*VAGDGL
Trigger: CAGCCCGTCTCCTGCTACCCAAGAGAAGAAGCCCAT...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGAGGATTCACTGGTGTTaGGCAAAGGAACCACAAGGG +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILRIHWC*AKEPQG
Trigger: CCCTTGTGGTTCCTTTGCCCAACACCAGTGAATCCT...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATACTGTGCTGACGGGCTaGAAGGATTCACTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYTVLTG*KDSLVL
Trigger: CAACACCAGTGAATCCTTCCAGCCCGTCAGCACAGT...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCACCCAAACTGTCTTCTaGCAGCCCCAGGAGACAAGA +
Preference number: 4 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFTQTVF*QPQETR
Trigger: TCTTGTCTCCTGGGGCTGCCAGAAGACAGTTTGGGT...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATCCTGAACAGTTAGAGTaGAGGGACCCCGGTCTAAGT +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYPEQLE*RDPGLS
Trigger: ACTTAGACCGGGGTCCCTCCACTCTAACTGTTCAGG...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCCTGAACAGTTAGAGTaGAGGGACCCCGGTCTAAGT +
Preference number: 4 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFPEQLE*RDPGLS
Trigger: ACTTAGACCGGGGTCCCTCCACTCTAACTGTTCAGG...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAATTGGTAGCACTGTGCTaGCGGGCTGGAAGGATTCAC +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQLVALC*RAGRIH
Trigger: GTGAATCCTTCCAGCCCGTCAGCACAGTGCTACCAA...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATTTGGTAGCACTGTGCTaGCGGGCTGGAAGGATTCAC +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYLVALC*RAGRIH
Trigger: GTGAATCCTTCCAGCCCGTCAGCACAGTGCTACCAA...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGTCCGAGAGCCATAGATaGCTTGTACTGACTCGACAA +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILSESHR*LVLTRQ
Trigger: TTGTCGAGTCAGTACAAGTCATCTATGGCTCTCGGA...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCTTCCGTTGTTCTGCCTaGACAGTTAGAGTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFFRCSA*TVRVEG
Trigger: TCCCTCCACTCTAACTGTTCAGGCAGAACAACGGAA...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATTTCCGTTGTTCTGCCTaGACAGTTAGAGTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYFRCSA*TVRVEG
Trigger: TCCCTCCACTCTAACTGTTCAGGCAGAACAACGGAA...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATGATCTGGCAGAGTCTTaGCTTTTCAAGGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYDLAES*LFKAAR
Trigger: CCTGGCCGCCTTGAAAAGGCAAGACTCTGCCAGATC...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATGGGCTGAGGTTGACATaGTGCTGTGATCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYGLRLT*CCDLAE
Trigger: CTCTGCCAGATCACAGCAGCATGTCAACCTCAGCCC...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGGGCGATCGTATTTGCTaGCAATCTCGAGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRGDRIC*QSRGTG
Trigger: TCCTGTGCCTCGAGATTGGCAGCAAATACGATCGCC...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATAGAGGCGATCGTATTTaGTGCCAATCTCGAGGCACA +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYRGDRI*CQSRGT
Trigger: TGTGCCTCGAGATTGGCAGCAAATACGATCGCCTCT...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCAGAGGCGATCGTATTTaGTGCCAATCTCGAGGCACA +
Preference number: 4 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFRGDRI*CQSRGT
Trigger: TGTGCCTCGAGATTGGCAGCAAATACGATCGCCTCT...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAAATGGGCTTCTTCTCTTaGGTAGCAGGAGACGGGCTG +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQMGFFS*VAGDGL
Trigger: CAGCCCGTCTCCTGCTACCCAAGAGAAGAAGCCCAT...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGCTGGAAGGATTCACTaGTGTTGGGCAAAGGAACCA +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYAGRIH*CWAKEP
Trigger: TGGTTCCTTTGCCCAACACCAGTGAATCCTTCCAGC...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGATCCCTAAGTATATCTaGCACTGTCAGCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILIPKYI*HCQPWL
Trigger: GAGCCATGGCTGACAGTGCCAGATATACTTAGGGAT...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGCCAGGAATAGGAACTTaGCCAGCACACAACTCAGTA +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILPGIGT*PAHNSV
Trigger: TACTGAGTTGTGTGCTGGCCAAGTTCCTATTCCTGG...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR TCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGCGTGTGAATGTCAATaGCTGTGGAATAGATATCCC +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILACECQ*LWNRYP
Trigger: GGGATATCTATTCCACAGTCATTGACATTCACACGC...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGTCCTTGACCTACTTTTaGGGTTGTCAGCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILSLTYF*GCQHLQ
Trigger: CTGAAGATGCTGACAACCTCAAAAGTAGGTCAAGGA...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATATAGATGACTTGTACTaGCTCGACAACGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYIDDLY*LDNDSP
Trigger: TGGGGAGTCGTTGTCGAGTCAGTACAAGTCATCTAT...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATGATTCTGATGCCTGCTaGGGTTTGAGAGCCACTGAG +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYDSDAC*GLRATE
Trigger: CTCAGTGGCTCTCAAACCTCAGCAGGCATCAGAATC...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545622.5
CDS-3UTR GCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGTCCCAGGAAATCCCTTaGTCTCTTCAGTCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILSQEIP*SLQSFS
Trigger: TGAAAACGACTGAAGAGAGCAAGGGATTTCCTGGGA...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296978.4
CDS-3UTR GCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACAGATCTGGCAGAGTCTTaGCTTTTCAAGGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTDLAES*LFKAAR
Trigger: CCTGGCCGCCTTGAAAAGGCAAGACTCTGCCAGATC...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACAGGGCTGAGGTTGACATaGTGCTGTGATCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTGLRLT*CCDLAE
Trigger: CTCTGCCAGATCACAGCAGCATGTCAACCTCAGCCC...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAAGGCGATCGTATTTGCTaGCAATCTCGAGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQGDRIC*QSRGTG
Trigger: TCCTGTGCCTCGAGATTGGCAGCAAATACGATCGCC...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGTGTCCATTCGAAAACTaGTCCGAAAACCCGAGAAAG +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILCPFEN*SENPRK
Trigger: CTTTCTCGGGTTTTCGGAGCAGTTTTCGAATGGACA...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACAATGGGCTTCTTCTCTTaGGTAGCAGGAGACGGGCTG +
Preference number: 4 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTMGFFS*VAGDGL
Trigger: CAGCCCGTCTCCTGCTACCCAAGAGAAGAAGCCCAT...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGTATCATCAGTTGTCTTaGAAGGAGGTGGATAGAGGC +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILYHQLS*KEVDRG
Trigger: GCCTCTATCCACCTCCTTCCAAGACAACTGATGATA...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGAGGATTCACTGGTGTTaGGCAAAGGAACCACAAGGG +
Preference number: 4 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRRIHWC*AKEPQG
Trigger: CCCTTGTGGTTCCTTTGCCCAACACCAGTGAATCCT...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAAACTGTGCTGACGGGCTaGAAGGATTCACTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQTVLTG*KDSLVL
Trigger: CAACACCAGTGAATCCTTCCAGCCCGTCAGCACAGT...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATACCCAAACTGTCTTCTaGCAGCCCCAGGAGACAAGA +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYTQTVF*QPQETR
Trigger: TCTTGTCTCCTGGGGCTGCCAGAAGACAGTTTGGGT...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAACCTGAACAGTTAGAGTaGAGGGACCCCGGTCTAAGT +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQPEQLE*RDPGLS
Trigger: ACTTAGACCGGGGTCCCTCCACTCTAACTGTTCAGG...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATCAACCTAGGCCAACTTaGATGTTTCCGTTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYQPRPT*MFPLFC
Trigger: GCAGAACAACGGAAACATCCAAGTTGGCCTAGGTTG...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGTTTTTGATGGCAACTTaGGGCACAAGCAACCTATCC +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILFLMAT*GTSNLS
Trigger: GGATAGGTTGCTTGTGCCCCAAGTTGCCATCAAAAA...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATATCCCTAAGTATATCTaGCACTGTCAGCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYIPKYI*HCQPWL
Trigger: GAGCCATGGCTGACAGTGCCAGATATACTTAGGGAT...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCGCGTGTGAATGTCAATaGCTGTGGAATAGATATCCC +
Preference number: 4 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFACECQ*LWNRYP
Trigger: GGGATATCTATTCCACAGTCATTGACATTCACACGC...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATTCCTTGACCTACTTTTaGGGTTGTCAGCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYSLTYF*GCQHLQ
Trigger: CTGAAGATGCTGACAACCTCAAAAGTAGGTCAAGGA...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGATAGATGACTTGTACTaGCTCGACAACGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRIDDLY*LDNDSP
Trigger: TGGGGAGTCGTTGTCGAGTCAGTACAAGTCATCTAT...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAATTCCGTTGTTCTGCCTaGACAGTTAGAGTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQFRCSA*TVRVEG
Trigger: TCCCTCCACTCTAACTGTTCAGGCAGAACAACGGAA...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGATTGAGTATTGGGACTaGATTTGTACTCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILIEYWD*ICTPGP
Trigger: TGGACCAGGAGTACAAATTCAGTCCCAATACTCAAT...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACATCCACTTCTCCCTACTaGATCAGAAGCGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTSTSPY*IRSAGP
Trigger: TGGTCCAGCGCTTCTGATTCAGTAGGGAGAAGTGGA...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545622.5
CDS-3UTR GCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGTCAAACCAGTGTACATaGCGTTCATTTGCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILSNQCT*RSFAFA
Trigger: AGCAAAGGCAAATGAACGGCATGTACACTGGTTTGA...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAAAGAGGCGATCGTATTTaGTGCCAATCTCGAGGCACA +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQRGDRI*CQSRGT
Trigger: TGTGCCTCGAGATTGGCAGCAAATACGATCGCCTCT...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATTGTCCATTCGAAAACTaGTCCGAAAACCCGAGAAAG +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYCPFEN*SENPRK
Trigger: CTTTCTCGGGTTTTCGGAGCAGTTTTCGAATGGACA...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATTGTGACGAGAGCAAATaGAAGGATGTATTGGACCCA +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYCDESK*KDVLDP
Trigger: TGGGTCCAATACATCCTTGCATTTGCTCTCGTCACA...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTGCTATCATAGCTTaGCCTTTTACTCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYVAIIA*PFTLQS
Trigger: GCTCTGGAGAGTAAAAGGCCAAGCTATGATAGCAAC...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296978.4
CDS-3UTR CCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATTATCATCAGTTGTCTTaGAAGGAGGTGGATAGAGGC +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYYHQLS*KEVDRG
Trigger: GCCTCTATCCACCTCCTTCCAAGACAACTGATGATA...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCTATCATCAGTTGTCTTaGAAGGAGGTGGATAGAGGC +
Preference number: 4 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFYHQLS*KEVDRG
Trigger: GCCTCTATCCACCTCCTTCCAAGACAACTGATGATA...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATAGGATTCACTGGTGTTaGGCAAAGGAACCACAAGGG +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYRIHWC*AKEPQG
Trigger: CCCTTGTGGTTCCTTTGCCCAACACCAGTGAATCCT...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATGCTGGAAGGATTCACTaGTGTTGGGCAAAGGAACCA +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYAGRIH*CWAKEP
Trigger: TGGTTCCTTTGCCCAACACCAGTGAATCCTTCCAGC...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACAACTGTGCTGACGGGCTaGAAGGATTCACTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTTVLTG*KDSLVL
Trigger: CAACACCAGTGAATCCTTCCAGCCCGTCAGCACAGT...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACAACCCAAACTGTCTTCTaGCAGCCCCAGGAGACAAGA +
Preference number: 4 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTTQTVF*QPQETR
Trigger: TCTTGTCTCCTGGGGCTGCCAGAAGACAGTTTGGGT...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGAATGCAAGGATGTATTaGACCCAAACTGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILNARMY*TQTVFW
Trigger: CCAGAAGACAGTTTGGGTCCAATACATCCTTGCATT...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATTTTTTGATGGCAACTTaGGGCACAAGCAACCTATCC +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYFLMAT*GTSNLS
Trigger: GGATAGGTTGCTTGTGCCCCAAGTTGCCATCAAAAA...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCTGAATTTGTACTCCTaGTCCACACTTTGGTACCCT +
Preference number: 4 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFLNLYS*STLWYP
Trigger: AGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAG...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGGGAATGCAAATTCATaGTTCCACTTCTCCCTACTG +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYGNANS*FHFSLL
Trigger: CAGTAGGGAGAAGTGGAACCATGAATTTGCATTCCC...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545622.5
CDS-3UTR TCA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGCGCCTTCATTCCGAATaGCCTGAGTTTCATTTGTTG +
Preference number: 4 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRRLHSE*PEFHLL
Trigger: CAACAAATGAAACTCAGGTCATTCGGAATGAAGGCG...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACATGCCAATCCCCATGGTaGATGGGCCAAGCATTTTCA +
Preference number: 4 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTCQSPW*MGQAFS
Trigger: TGAAAATGCTTGGCCCATTCACCATGGGGATTGGCA...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATTTTGCCTTTGCTCCTTaGTTCTTAGCGTGTGAATGT +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYFAFAP*FLACEC
Trigger: ACATTCACACGCTAAGAATCAAGGAGCAAAGGCAAA...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCTGTCAGCATCTTCAGTaGTGTTATCTATACTGGGCT +
Preference number: 4 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFCQHLQ*CYLYWA
Trigger: AGCCCAGTATAGATAACATCACTGAAGATGCTGACA...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAAATAGATGACTTGTACTaGCTCGACAACGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQIDDLY*LDNDSP
Trigger: TGGGGAGTCGTTGTCGAGTCAGTACAAGTCATCTAT...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATATTGAGTATTGGGACTaGATTTGTACTCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYIEYWD*ICTPGP
Trigger: TGGACCAGGAGTACAAATTCAGTCCCAATACTCAAT...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTCAGCCATGGCTCTTaGATACGTTGTTTCTTGATA +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYVSHGS*IRCFLI
Trigger: TATCAAGAAACAACGTATTCAAGAGCCATGGCTGAC...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCGTCAGCCATGGCTCTTaGATACGTTGTTTCTTGATA +
Preference number: 4 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFVSHGS*IRCFLI
Trigger: TATCAAGAAACAACGTATTCAAGAGCCATGGCTGAC...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGGACTGGGCTTGCATGTaGGCATGTAAAGAAACGTTA +
Preference number: 4 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRDWACM*ACKETL
Trigger: TAACGTTTCTTTACATGCTCACATGCAAGCCCAGTC...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR TCA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCAGTCTGAAATCCTTCTaGGTAGAATGGAAACAAGGG +
Preference number: 4 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFSLKSF*VEWKQG
Trigger: CCCTTGTTTCCATTCTACTCAGAAGGATTTCAGACT...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR TCA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCGTTTTAACAAGCCAGTaGGTAAATCCAGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFVLTSQ*VNPAFS
Trigger: ACTGAAGGCTGGATTTACTCACTGGCTTGTTAAAAC...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR GCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATTATCACTCCACCAGTTaGTATCATAGCTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYYHSTS*YHSLAF
Trigger: AAAGGCCAAGCTATGATAGCAACTGGTGGAGTGATA...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGTCAGAATGCAAATGCTaGTCAAAGAAGCGAACCACC +
Preference number: 4 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRSECKC*SKKRTT
Trigger: GGTGGTTCGCTTCTTTGAGCAGCATTTGCATTCTGA...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATTCAAACCAGTGTACATaGCGTTCATTTGCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYSNQCT*RSFAFA
Trigger: AGCAAAGGCAAATGAACGGCATGTACACTGGTTTGA...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGAAAGGGGGCATAAGATaGCCAGAACTCTTACCTTCA +
Preference number: 4 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRKGGIR*PELLPS
Trigger: TGAAGGTAAGAGTTCTGGGCATCTTATGCCCCCTTT...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGTGTGACGAGAGCAAATaGAAGGATGTATTGGACCCA +
Preference number: 4 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRCDESK*KDVLDP
Trigger: TGGGTCCAATACATCCTTGCATTTGCTCTCGTCACA...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCGTTTCATATATCCCTTaGTGTTGTTCCGATCCAACC +
Preference number: 4 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFVSYIP*CCSDPT
Trigger: GGTTGGATCGGAACAACAGCAAGGGATATATGAAAC...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGAATGTGGGAATGAGGTaGTATTGGACAGTAACAGAT +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILNVGMR*YWTVTD
Trigger: ATCTGTTACTGTCCAATAGCACCTCATTCCCACATT...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCAATCCCCATGGTGAATaGGCCAAGCATTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFNPHGE*AKHFHL
Trigger: AAGATGAAAATGCTTGGCCCATTCACCATGGGGATT...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATAATCCCCATGGTGAATaGGCCAAGCATTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYNPHGE*AKHFHL
Trigger: AAGATGAAAATGCTTGGCCCATTCACCATGGGGATT...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACAAGGATTCACTGGTGTTaGGCAAAGGAACCACAAGGG +
Preference number: 4 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTRIHWC*AKEPQG
Trigger: CCCTTGTGGTTCCTTTGCCCAACACCAGTGAATCCT...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATACAACGACTCCCCAATaGAATTATTCCTTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYTTTPQ*NYSLVA
Trigger: TGCTACCAAGGAATAATTCCATTGGGGAGTCGTTGT...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATCAACCTAGGCCAACTTaGATGTTTCCGTTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYQPRPT*MFPLFC
Trigger: GCAGAACAACGGAAACATCCAAGTTGGCCTAGGTTG...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAACAACCTAGGCCAACTTaGATGTTTCCGTTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQQPRPT*MFPLFC
Trigger: GCAGAACAACGGAAACATCCAAGTTGGCCTAGGTTG...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGTTTTTGATGGCAACTTaGGGCACAAGCAACCTATCC +
Preference number: 4 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRFLMAT*GTSNLS
Trigger: GGATAGGTTGCTTGTGCCCCAAGTTGCCATCAAAAA...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGCTGAATTTGTACTCCTaGTCCACACTTTGGTACCCT +
Preference number: 4 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRLNLYS*STLWYP
Trigger: AGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAG...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATATCCCTAAGTATATCTaGCACTGTCAGCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYIPKYI*HCQPWL
Trigger: GAGCCATGGCTGACAGTGCCAGATATACTTAGGGAT...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGCCAAGTCTTGGGAGTTaGCAAATGCTATTCCTAAAT +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILPSLGS*QMLFLN
Trigger: ATTTAGGAATAGCATTTGCCAACTCCCAAGACTTGG...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR TCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATCTGAGTTTCATTTGTTaGCAGTGTTGTTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYLSFIC*QCCFSI
Trigger: GATGCTGAAACAACACTGTCAACAAATGAAACTCAG...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATCGCCTTCATTCCGAATaGCCTGAGTTTCATTTGTTG +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYRLHSE*PEFHLL
Trigger: CAACAAATGAAACTCAGGTCATTCGGAATGAAGGCG...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATTTGTCACGGTTTTCATaGAGAATGGCATTAGCACAA +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYLSRFS*RMALAQ
Trigger: TTGTGCTAATGCCATTCTTCATGAAAACCGTGACAA...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCTATCCCTCATGTGTATaGTTTTGGTCTCTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFYPSCV*FWSLCH
Trigger: GTGACAAAGAGACCAAAATCATACACATGAGGGATA...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATTTGATTCTTAGCGTGTaGATGTCAATGACTGTGGAA +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYLILSV*MSMTVE
Trigger: TTCCACAGTCATTGACATTCACACGCTAAGAATCAA...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGTTTGCCTTTGCTCCTTaGTTCTTAGCGTGTGAATGT +
Preference number: 4 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRFAFAP*FLACEC
Trigger: ACATTCACACGCTAAGAATCAAGGAGCAAAGGCAAA...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAATCCTTGACCTACTTTTaGGGTTGTCAGCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQSLTYF*GCQHLQ
Trigger: CTGAAGATGCTGACAACCTCAAAAGTAGGTCAAGGA...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACATCCGAGAGCCATAGATaGCTTGTACTGACTCGACAA +
Preference number: 4 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTSESHR*LVLTRQ
Trigger: TTGTCGAGTCAGTACAAGTCATCTATGGCTCTCGGA...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGGTCAGCCATGGCTCTTaGATACGTTGTTTCTTGATA +
Preference number: 4 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRVSHGS*IRCFLI
Trigger: TATCAAGAAACAACGTATTCAAGAGCCATGGCTGAC...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATCTGTTTCAAACAGCTTaGAACCTAATGAAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYLFQTA*NLMKEL
Trigger: TAGCTCCTTCATTAGGTTTCAAGCTGTTTGAAACAG...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR TCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAATTTCGCTTAGGAGGCTaGTTGATAGAGGAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQFRLGG*LIEERR
Trigger: TCTCCTTTCCTCTATCAATCAGCCTCCTAAGCGAAA...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR GCA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGTATCACTCCACCAGTTaGTATCATAGCTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRYHSTS*YHSLAF
Trigger: AAAGGCCAAGCTATGATAGCAACTGGTGGAGTGATA...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATAATAAAGCCGGATTTTaGCACGAACAACCACAACAT +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYNKAGF*HEQPQH
Trigger: ATGTTGTGGTTGTTCGTGGCAAAATCCGGCTTTATT...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAATCAGAATGCAAATGCTaGTCAAAGAAGCGAACCACC +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQSECKC*SKKRTT
Trigger: GGTGGTTCGCTTCTTTGAGCAGCATTTGCATTCTGA...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATTCAGAATGCAAATGCTaGTCAAAGAAGCGAACCACC +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYSECKC*SKKRTT
Trigger: GGTGGTTCGCTTCTTTGAGCAGCATTTGCATTCTGA...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATTACATGCCGTTCATTTaGCTTTGCTCCTTGATTCTT +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYYMPFI*LCSLIL
Trigger: AAGAATCAAGGAGCAAAGGCAAATGAACGGCATGTA...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGTCAAACCAGTGTACATaGCGTTCATTTGCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRSNQCT*RSFAFA
Trigger: AGCAAAGGCAAATGAACGGCATGTACACTGGTTTGA...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATAAAGGGGGCATAAGATaGCCAGAACTCTTACCTTCA +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYKGGIR*PELLPS
Trigger: TGAAGGTAAGAGTTCTGGGCATCTTATGCCCCCTTT...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATTGTGACGAGAGCAAATaGAAGGATGTATTGGACCCA +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYCDESK*KDVLDP
Trigger: TGGGTCCAATACATCCTTGCATTTGCTCTCGTCACA...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATAATGTGGGAATGAGGTaGTATTGGACAGTAACAGAT +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYNVGMR*YWTVTD
Trigger: ATCTGTTACTGTCCAATAGCACCTCATTCCCACATT...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATCAAATCTCATCTTaGAGCATTGAGCTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFHQISS*SIELSF
Trigger: AAAGGAGAGCTCAATGCTGCAAGATGAGATTTGATG...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR CCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAATATCATCAGTTGTCTTaGAAGGAGGTGGATAGAGGC +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQYHQLS*KEVDRG
Trigger: GCCTCTATCCACCTCCTTCCAAGACAACTGATGATA...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGACAACGACTCCCCAATaGAATTATTCCTTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRTTTPQ*NYSLVA
Trigger: TGCTACCAAGGAATAATTCCATTGGGGAGTCGTTGT...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACACAACCTAGGCCAACTTaGATGTTTCCGTTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTQPRPT*MFPLFC
Trigger: GCAGAACAACGGAAACATCCAAGTTGGCCTAGGTTG...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATTTTTTGATGGCAACTTaGGGCACAAGCAACCTATCC +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYFLMAT*GTSNLS
Trigger: GGATAGGTTGCTTGTGCCCCAAGTTGCCATCAAAAA...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAACTGAATTTGTACTCCTaGTCCACACTTTGGTACCCT +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQLNLYS*STLWYP
Trigger: AGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAG...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACAATCCCTAAGTATATCTaGCACTGTCAGCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTIPKYI*HCQPWL
Trigger: GAGCCATGGCTGACAGTGCCAGATATACTTAGGGAT...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCTTGGACAGTAACAGATaGCTAAAAACAGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFLDSNR*LKTGTE
Trigger: CTCAGTACCTGTTTTTAGCCATCTGTTACTGTCCAA...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTCCACAAGGTCTTTaGCAAATTTCAGAGAGAGTT +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYVPQGL*QISERV
Trigger: AACTCTCTCTGAAATTTGCCAAAGACCTTGTGGAAC...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR CCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATCAAGAAGAGTTCAGATaGAGTAATGCTGCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYQEEFR*SNAAQN
Trigger: ATTTTGGGCAGCATTACTCCATCTGAACTCTTCTTG...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545622.5
CDS-3UTR TCA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGTCATTCCGAATGACCTaGGTTTCATTTGTTGACAGT +
Preference number: 4 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRSFRMT*VSFVDS
Trigger: ACTGTCAACAAATGAAACTCAGGTCATTCGGAATGA...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACAGCGTGTGAATGTCAATaGCTGTGGAATAGATATCCC +
Preference number: 4 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTACECQ*LWNRYP
Trigger: GGGATATCTATTCCACAGTCATTGACATTCACACGC...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGTTGATTCTTAGCGTGTaGATGTCAATGACTGTGGAA +
Preference number: 4 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRLILSV*MSMTVE
Trigger: TTCCACAGTCATTGACATTCACACGCTAAGAATCAA...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAATTTGCCTTTGCTCCTTaGTTCTTAGCGTGTGAATGT +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQFAFAP*FLACEC
Trigger: ACATTCACACGCTAAGAATCAAGGAGCAAAGGCAAA...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATTGTCAGCATCTTCAGTaGTGTTATCTATACTGGGCT +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYCQHLQ*CYLYWA
Trigger: AGCCCAGTATAGATAACATCACTGAAGATGCTGACA...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAAATTGAGTATTGGGACTaGATTTGTACTCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQIEYWD*ICTPGP
Trigger: TGGACCAGGAGTACAAATTCAGTCCCAATACTCAAT...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAAGTCAGCCATGGCTCTTaGATACGTTGTTTCTTGATA +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQVSHGS*IRCFLI
Trigger: TATCAAGAAACAACGTATTCAAGAGCCATGGCTGAC...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAACTCATCTTGCAGCATTaGGCTCTCCTTTTGAATTTC +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQLILQH*ALLLNF
Trigger: GAAATTCAAAAGGAGAGCTCAATGCTGCAAGATGAG...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR TCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATTTGTGGTCTGTTGGATaGCCACCATATTACTGTACT +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYLWSVG*PPYYCT
Trigger: AGTACAGTAATATGGTGGTCATCCAACAGACCACAA...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR GCA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGAATAAAGCCGGATTTTaGCACGAACAACCACAACAT +
Preference number: 4 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRNKAGF*HEQPQH
Trigger: ATGTTGTGGTTGTTCGTGGCAAAATCCGGCTTTATT...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGTACATGCCGTTCATTTaGCTTTGCTCCTTGATTCTT +
Preference number: 4 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRYMPFI*LCSLIL
Trigger: AAGAATCAAGGAGCAAAGGCAAATGAACGGCATGTA...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATTCAAACCAGTGTACATaGCGTTCATTTGCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYSNQCT*RSFAFA
Trigger: AGCAAAGGCAAATGAACGGCATGTACACTGGTTTGA...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACATGTGACGAGAGCAAATaGAAGGATGTATTGGACCCA +
Preference number: 4 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTCDESK*KDVLDP
Trigger: TGGGTCCAATACATCCTTGCATTTGCTCTCGTCACA...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATGTTTCATATATCCCTTaGTGTTGTTCCGATCCAACC +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYVSYIP*CCSDPT
Trigger: GGTTGGATCGGAACAACAGCAAGGGATATATGAAAC...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATCTCACTGTAATACCTTaGACATGGCTAGTGTTCAAG +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYLTVIP*TWLVFK
Trigger: CTTGAACACTAGCCATGTGCAAGGTATTACAGTGAG...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR CCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATAATCCCCATGGTGAATaGGCCAAGCATTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYNPHGE*AKHFHL
Trigger: AAGATGAAAATGCTTGGCCCATTCACCATGGGGATT...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAAACAACGACTCCCCAATaGAATTATTCCTTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQTTTPQ*NYSLVA
Trigger: TGCTACCAAGGAATAATTCCATTGGGGAGTCGTTGT...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATAATGCAAGGATGTATTaGACCCAAACTGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYNARMY*TQTVFW
Trigger: CCAGAAGACAGTTTGGGTCCAATACATCCTTGCATT...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGTTGGACAGTAACAGATaGCTAAAAACAGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRLDSNR*LKTGTE
Trigger: CTCAGTACCTGTTTTTAGCCATCTGTTACTGTCCAA...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGTGGCAAAATCACATTTaGTGCCAATGTCCTTTAATT +
Preference number: 4 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILWQNHI*CQCPLI
Trigger: AATTAAAGGACATTGGCACCAAATGTGATTTTGCCA...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR CCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAACTTCTTGTGGTCTGTTaGATGACCACCATATTACTG +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQLLVVC*MTTILL
Trigger: CAGTAATATGGTGGTCATCCAACAGACCACAAGAAG...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR TCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATCTGAGTTTCATTTGTTaGCAGTGTTGTTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYLSFIC*QCCFSI
Trigger: GATGCTGAAACAACACTGTCAACAAATGAAACTCAG...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAATCATTCCGAATGACCTaGGTTTCATTTGTTGACAGT +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQSFRMT*VSFVDS
Trigger: ACTGTCAACAAATGAAACTCAGGTCATTCGGAATGA...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAATTGTCACGGTTTTCATaGAGAATGGCATTAGCACAA +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQLSRFS*RMALAQ
Trigger: TTGTGCTAATGCCATTCTTCATGAAAACCGTGACAA...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATTTGTCACGGTTTTCATaGAGAATGGCATTAGCACAA +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYLSRFS*RMALAQ
Trigger: TTGTGCTAATGCCATTCTTCATGAAAACCGTGACAA...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATTATCCCTCATGTGTATaGTTTTGGTCTCTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYYPSCV*FWSLCH
Trigger: GTGACAAAGAGACCAAAATCATACACATGAGGGATA...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAATTGATTCTTAGCGTGTaGATGTCAATGACTGTGGAA +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQLILSV*MSMTVE
Trigger: TTCCACAGTCATTGACATTCACACGCTAAGAATCAA...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACATGTCAGCATCTTCAGTaGTGTTATCTATACTGGGCT +
Preference number: 4 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTCQHLQ*CYLYWA
Trigger: AGCCCAGTATAGATAACATCACTGAAGATGCTGACA...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACATATCACTCCACCAGTTaGTATCATAGCTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTYHSTS*YHSLAF
Trigger: AAAGGCCAAGCTATGATAGCAACTGGTGGAGTGATA...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAAAATAAAGCCGGATTTTaGCACGAACAACCACAACAT +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQNKAGF*HEQPQH
Trigger: ATGTTGTGGTTGTTCGTGGCAAAATCCGGCTTTATT...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAATACATGCCGTTCATTTaGCTTTGCTCCTTGATTCTT +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQYMPFI*LCSLIL
Trigger: AAGAATCAAGGAGCAAAGGCAAATGAACGGCATGTA...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR GCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAAAATGTGGGAATGAGGTaGTATTGGACAGTAACAGAT +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQNVGMR*YWTVTD
Trigger: ATCTGTTACTGTCCAATAGCACCTCATTCCCACATT...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCATAAAATGTTCTTTTTaGGGCCAATATCCAAGAACG +
Preference number: 4 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFIKCSF*GQYPRT
Trigger: CGTTCTTGGATATTGGCCCCAAAAAGAACATTTTAT...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATATAAAATGTTCTTTTTaGGGCCAATATCCAAGAACG +
Preference number: 4 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYIKCSF*GQYPRT
Trigger: CGTTCTTGGATATTGGCCCCAAAAAGAACATTTTAT...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACAACAACGACTCCCCAATaGAATTATTCCTTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTTTTPQ*NYSLVA
Trigger: TGCTACCAAGGAATAATTCCATTGGGGAGTCGTTGT...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATTTGGACAGTAACAGATaGCTAAAAACAGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYLDSNR*LKTGTE
Trigger: CTCAGTACCTGTTTTTAGCCATCTGTTACTGTCCAA...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATGTTGCTATCATAGCTTaGCCTTTTACTCTTCTAGCA +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYVAIIA*PFTLLA
Trigger: TGCTAGAAGAGTAAAAGGCCAAGCTATGATAGCAAC...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR CCA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGGTTGCTATCATAGCTTaGCCTTTTACTCTGAGAATA +
Preference number: 4 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRVAIIA*PFTLRI
Trigger: TATTCTCAGAGTAAAAGGCCAAGCTATGATAGCAAC...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545622.5
CDS-3UTR TCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACATTGTCACGGTTTTCATaGAGAATGGCATTAGCACAA +
Preference number: 4 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTLSRFS*RMALAQ
Trigger: TTGTGCTAATGCCATTCTTCATGAAAACCGTGACAA...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACATATCCCTCATGTGTATaGTTTTGGTCTCTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTYPSCV*FWSLCH
Trigger: GTGACAAAGAGACCAAAATCATACACATGAGGGATA...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR TCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAATACCAAAGTTTTAGCTaGAATTCTAGACCCATTGAC +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQYQSFS*NSRPID
Trigger: GTCAATGGGTCTAGAATTTCAGCTAAAACTTTGGTA...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR GCA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATTCAAAGTGTACATACTaGAGATTAGAACCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: SWSTLWYPMFSILDISFYSKCTY*RLEPFP
Trigger: TGGGAAAGGTTCTAATCTGCAGTATGTACACTTTGA...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR GCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAACAAAATCACATTTGGTaGCAATGTCCTTTAATTCTG +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQQNHIW*QCPLIL
Trigger: CAGAATTAAAGGACATTGGCACCAAATGTGATTTTG...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR CCA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAAATAAAATGTTCTTTTTaGGGCCAATATCCAAGAACG +
Preference number: 4 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQIKCSF*GQYPRT
Trigger: CGTTCTTGGATATTGGCCCCAAAAAGAACATTTTAT...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CCA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACAATAAAATGTTCTTTTTaGGGCCAATATCCAAGAACG +
Preference number: 4 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTIKCSF*GQYPRT
Trigger: CGTTCTTGGATATTGGCCCCAAAAAGAACATTTTAT...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS CCA 90 bp CAGTCCTGGTCTCACTCCAGGAGCTGTCGGGACGTCGGGCGCCTCTaGAGGCGGACGAAGAAGGCGGCAGGGTCGGGGGCGTCAGCGGGA +
Preference number: 5 (lower is better)
Translates to: QSWSHSRSCRDVGRL*RRTKKAAGSGASAG
Trigger: TCCCGCTGACGCCCCCGACCCTGCCGCCTTCTTCGTCCGCCTCCAGAGGCGCCCGACGTCCCGACAGCTCCTGGAGTGAGACCAGGACTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296978.4
ENST00000617887.4
CDS CCA 90 bp GCACCGGGCCCTGGGGGTCGGGTCGCCTCTCCCTGTTCTCAGTCCTaGTCTCACTCCAGGAGCTGTCGGGACGTCGGGCGCCTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: APGPGGRVASPCSQS*SHSRSCRDVGRLWR
Trigger: CCTCCAGAGGCGCCCGACGTCCCGACAGCTCCTGGAGTGAGACCAGGACTGAGAACAGGGAGAGGCGACCCGACCCCCAGGGCCCGGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296978.4
ENST00000617887.4
CDS CCA 90 bp ACCACAACATCTGCCCGGGGCCGGCGCCTGATGGGCTTCTTCTCTTaGGTAGCAGGAGACGGGCTGAGGTTGACATGCTGCTGTGATCTG +
Preference number: 5 (lower is better)
Translates to: TTTSARGRRLMGFFS*VAGDGLRLTCCCDL
Trigger: CAGATCACAGCAGCATGTCAACCTCAGCCCGTCTCCTGCTACCCAAGAGAAGAAGCCCATCAGGCGCCGGCCCCGGGCAGATGTTGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS GCA 90 bp GGCTTCTTCTCTTGGGTAGCAGGAGACGGGCTGAGGTTGACATGCTaGTGTGATCTGGCAGAGTCTTGCCTTTTCAAGGCGGCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: GFFSWVAGDGLRLTC*CDLAESCLFKAARP
Trigger: TGGCCTGGCCGCCTTGAAAAGGCAAGACTCTGCCAGATCACAGCAGCATGTCAACCTCAGCCCGTCTCCTGCTACCCAAGAGAAGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS GCA 90 bp ATGGGCTTCTTCTCTTGGGTAGCAGGAGACGGGCTGAGGTTGACATaGTGCTGTGATCTGGCAGAGTCTTGCCTTTTCAAGGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: MGFFSWVAGDGLRLT*CCDLAESCLFKAAR
Trigger: CCTGGCCGCCTTGAAAAGGCAAGACTCTGCCAGATCACAGCAGCATGTCAACCTCAGCCCGTCTCCTGCTACCCAAGAGAAGAAGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS CCA 90 bp GTGACGAGAGCAAATGCAAGGATGTATTGGACCCAAACTGTCTTCTaGCAGCCCCAGGAGACAAGAGCTGTCCAGCCCCAGGTCCGAGAG +
Preference number: 5 (lower is better)
Translates to: VTRANARMYWTQTVF*QPQETRAVQPQVRE
Trigger: CTCTCGGACCTGGGGCTGGACAGCTCTTGTCTCCTGGGGCTGCCAGAAGACAGTTTGGGTCCAATACATCCTTGCATTTGCTCTCGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS TCA 90 bp CTTCTCTTGGGTAGCAGGAGACGGGCTGAGGTTGACATGCTGCTGTaGTCTGGCAGAGTCTTGCCTTTTCAAGGCGGCCAGGCCAGTTAT +
Preference number: 5 (lower is better)
Translates to: LLLGSRRRAEVDMLL*SGRVLPFQGGQASY
Trigger: ATAACTGGCCTGGCCGCCTTGAAAAGGCAAGACTCTGCCAGATCACAGCAGCATGTCAACCTCAGCCCGTCTCCTGCTACCCAAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS GCA 90 bp GTCTTGCCTTTTCAAGGCGGCCAGGCCAGTTATCACTCCACCAGTTaGTATCATAGCTTGGCCTTTTACTCTGTCCTGAGCACCGGGCCC +
Preference number: 5 (lower is better)
Translates to: VLPFQGGQASYHSTS*YHSLAFYSVLSTGP
Trigger: GGGCCCGGTGCTCAGGACAGAGTAAAAGGCCAAGCTATGATAGCAACTGGTGGAGTGATAACTGGCCTGGCCGCCTTGAAAAGGCAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617887.4
CDS GCA 90 bp GCTTGGCCTTTTACTCTCCAGAGCCAGATGTCCCAGGAAATCCCTTaGTCTCTTCAGTCGTTTTCAGCGGCTCTGTGTGCTGTCCTGAGC +
Preference number: 5 (lower is better)
Translates to: AWPFTLQSQMSQEIP*SLQSFSAALCAVLS
Trigger: GCTCAGGACAGCACACAGAGCCGCTGAAAACGACTGAAGAGAGCAAGGGATTTCCTGGGACATCTGGCTCTGGAGAGTAAAAGGCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296978.4
CDS TCA 90 bp CCCAGGAGACAAGAGCTGTCCAGCCCCAGGTCCGAGAGCCATAGATaGCTTGTACTGACTCGACAACGACTCCCCAATGGAATTATTCCT +
Preference number: 5 (lower is better)
Translates to: PRRQELSSPRSESHR*LVLTRQRLPNGIIP
Trigger: AGGAATAATTCCATTGGGGAGTCGTTGTCGAGTCAGTACAAGTCATCTATGGCTCTCGGACCTGGGGCTGGACAGCTCTTGTCTCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS GCA 90 bp GGACCCCGGTCTAAGTCCAAGGACTTTGAGTGTGACGAGAGCAAATaGAAGGATGTATTGGACCCAAACTGTCTTCTGGCAGCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: GPRSKSKDFECDESK*KDVLDPNCLLAAPG
Trigger: TCCTGGGGCTGCCAGAAGACAGTTTGGGTCCAATACATCCTTGCATTTGCTCTCGTCACACTCAAAGTCCTTGGACTTAGACCGGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS GCA 90 bp GTCTTGCCTTTTCAAGGCGGCCAGGCCAGTTATCACTCCACCAGTTaGTATCATAGCTTGGCCTTTTACTCTCCAGAGCCAGATGTCCCA +
Preference number: 5 (lower is better)
Translates to: VLPFQGGQASYHSTS*YHSLAFYSPEPDVP
Trigger: TGGGACATCTGGCTCTGGAGAGTAAAAGGCCAAGCTATGATAGCAACTGGTGGAGTGATAACTGGCCTGGCCGCCTTGAAAAGGCAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296978.4
CDS TCA 90 bp AAGAGCTGTCCAGCCCCAGGTCCGAGAGCCATAGATGACTTGTACTaGCTCGACAACGACTCCCCAATGGAATTATTCCTTGGTAGCACT +
Preference number: 5 (lower is better)
Translates to: KSCPAPGPRAIDDLY*LDNDSPMELFLGST
Trigger: AGTGCTACCAAGGAATAATTCCATTGGGGAGTCGTTGTCGAGTCAGTACAAGTCATCTATGGCTCTCGGACCTGGGGCTGGACAGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS TCA 90 bp TTCCGATCCAACCTAGGCCAACTTGGATGTTTCCGTTGTTCTGCCTaGACAGTTAGAGTGGAGGGACCCCGGTCTAAGTCCAAGGACTTT +
Preference number: 5 (lower is better)
Translates to: FRSNLGQLGCFRCSA*TVRVEGPRSKSKDF
Trigger: AAAGTCCTTGGACTTAGACCGGGGTCCCTCCACTCTAACTGTTCAGGCAGAACAACGGAAACATCCAAGTTGGCCTAGGTTGGATCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS GCA 90 bp GTCTTGCCTTTTCAAGGCGGCCAGGCCAGTTATCACTCCACCAGTTaGTATCATAGCTTGGCCTTTTACTCTTCTAGCACACACCAGCTG +
Preference number: 5 (lower is better)
Translates to: VLPFQGGQASYHSTS*YHSLAFYSSSTHQL
Trigger: CAGCTGGTGTGTGCTAGAAGAGTAAAAGGCCAAGCTATGATAGCAACTGGTGGAGTGATAACTGGCCTGGCCGCCTTGAAAAGGCAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS CCA 90 bp AGTCCAAGGACTTTGAGTGTGACGAGAGCAAATGCAAGGATGTATTaGACCCAAACTGTCTTCTGGCAGCCCCAGGAGACAAGAGCTGTC +
Preference number: 5 (lower is better)
Translates to: SPRTLSVTRANARMY*TQTVFWQPQETRAV
Trigger: GACAGCTCTTGTCTCCTGGGGCTGCCAGAAGACAGTTTGGGTCCAATACATCCTTGCATTTGCTCTCGTCACACTCAAAGTCCTTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS CCA 90 bp AGCAACACTGGTATAACCTGTGAGCTTGTCGGGAATGCAAATTCATaGTTCCACTTCTCCCTACTGAATCAGAAGCGCTGGACCAAGCGG +
Preference number: 5 (lower is better)
Translates to: SNTGITCELVGNANS*FHFSLLNQKRWTKR
Trigger: CCGCTTGGTCCAGCGCTTCTGATTCAGTAGGGAGAAGTGGAACCATGAATTTGCATTCCCGACAAGCTCACAGGTTATACCAGTGTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545622.5
CDS CCA 90 bp CGAGTCTTGGGACGTAAGGAGGTAAGAGAACAAGAAGAGTTCAGATaGAGTAATGCTGCCCAAAATACAATCCTCGGGCCAGCAACACTG +
Preference number: 5 (lower is better)
Translates to: RVLGRKEVREQEEFR*SNAAQNTILGPATL
Trigger: CAGTGTTGCTGGCCCGAGGATTGTATTTTGGGCAGCATTACTCCATCTGAACTCTTCTTGTTCTCTTACCTCCTTACGTCCCAAGACTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545622.5
CDS-3UTR CAA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGGAGACGGGCTGAGGTaGACATGCTGCTGTGATCTG +
Preference number: 5 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYGDGLR*TCCCDL
Trigger: CAGATCACAGCAGCATGTCAACCTCAGCCCGTCTCC...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCGGAGACGGGCTGAGGTaGACATGCTGCTGTGATCTG +
Preference number: 5 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFGDGLR*TCCCDL
Trigger: CAGATCACAGCAGCATGTCAACCTCAGCCCGTCTCC...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS GCA 90 bp ATGGTGAATGGGCCAAGCATTTTCATCTTATCAGAATGCAAATGCTaGTCAAAGAAGCGAACCACCACACCGCCTTCATTCCGAATGACC +
Preference number: 5 (lower is better)
Translates to: MVNGPSIFILSECKC*SKKRTTTPPSFRMT
Trigger: GGTCATTCGGAATGAAGGCGGTGTGGTGGTTCGCTTCTTTGAGCAGCATTTGCATTCTGATAAGATGAAAATGCTTGGCCCATTCACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS GCA 90 bp GTCTTGCCTTTTCAAGGCGGCCAGGCCAGTTATCACTCCACCAGTTaGTATCATAGCTTGGCCTTTTACTCTGAGAATAAACTAACATCC +
Preference number: 5 (lower is better)
Translates to: VLPFQGGQASYHSTS*YHSLAFYSENKLTS
Trigger: GGATGTTAGTTTATTCTCAGAGTAAAAGGCCAAGCTATGATAGCAACTGGTGGAGTGATAACTGGCCTGGCCGCCTTGAAAAGGCAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545622.5
CDS-3UTR CAA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAAGGAGACGGGCTGAGGTaGACATGCTGCTGTGATCTG +
Preference number: 5 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQGDGLR*TCCCDL
Trigger: CAGATCACAGCAGCATGTCAACCTCAGCCCGTCTCC...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCAAGAGGCGATCGTATTaGCTGCCAATCTCGAGGCAC +
Preference number: 5 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFKRRSY*LPISRH
Trigger: GTGCCTCGAGATTGGCAGCAAATACGATCGCCTCTT...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGTCCAGGAATAGGAACTaGGCCAGCACACAACTCAGT +
Preference number: 5 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILSRNRN*ASTQLS
Trigger: ACTGAGTTGTGTGCTGGCCAAGTTCCTATTCCTGGA...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR CAA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATAAGGATTCACTGGTGTaGGGCAAAGGAACCACAAGG +
Preference number: 5 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYKDSLV*GKGTTR
Trigger: CCTTGTGGTTCCTTTGCCCAACACCAGTGAATCCTT...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCAAGGATTCACTGGTGTaGGGCAAAGGAACCACAAGG +
Preference number: 5 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFKDSLV*GKGTTR
Trigger: CCTTGTGGTTCCTTTGCCCAACACCAGTGAATCCTT...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGCTCCTGGTCCACACTTaGGTACCCTATGTTTTCCAT +
Preference number: 5 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILLLVHT*VPYVFH
Trigger: ATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAG...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACCTACTTTTGAGGTaGTCAGCATCTTCAGTGATG +
Preference number: 5 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILDLLLR*SASSVM
Trigger: CATCACTGAAGATGCTGACAACCTCAAAAGTAGGTC...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGCCACAAGGGAATCCATaGACAAATTCCTTGACCTAC +
Preference number: 5 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILPQGNP*TNSLTY
Trigger: GTAGGTCAAGGAATTTGTCAATGGATTCCCTTGTGG...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATATATATCCCTTGCTGTaGTTCCGATCCAACCTAGGC +
Preference number: 5 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYIYPLL*FRSNLG
Trigger: GCCTAGGTTGGATCGGAACAACAGCAAGGGATATAT...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGTTGGTAAAGTCCTTTTaGATGGCAACTTGGGGCACA +
Preference number: 5 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILLVKSF*MATWGT
Trigger: TGTGCCCCAAGTTGCCATCAAAAAGGACTTTACCAA...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATCTCCTGGTCCACACTTaGGTACCCTATGTTTTCCAT +
Preference number: 5 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYLLVHT*VPYVFH
Trigger: ATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAG...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGTATTGGGACTGAATTaGTACTCCTGGTCCACACTT +
Preference number: 5 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILVLGLN*YSWSTL
Trigger: AAGTGTGGACCAGGAGTACAAATTCAGTCCCAATAC...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTACATGCCGTTCATTaGCCTTTGCTCCTTGATTCT +
Preference number: 5 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYVHAVH*PLLLDS
Trigger: AGAATCAAGGAGCAAAGGCAAATGAACGGCATGTAC...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCGTACATGCCGTTCATTaGCCTTTGCTCCTTGATTCT +
Preference number: 5 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFVHAVH*PLLLDS
Trigger: AGAATCAAGGAGCAAAGGCAAATGAACGGCATGTAC...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACAAAGAGGCGATCGTATTaGCTGCCAATCTCGAGGCAC +
Preference number: 5 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTKRRSY*LPISRH
Trigger: GTGCCTCGAGATTGGCAGCAAATACGATCGCCTCTT...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATTGGTCTTATCATCAGTaGTCTTGGAAGGAGGTGGAT +
Preference number: 5 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYWSYHQ*SWKEVD
Trigger: ATCCACCTCCTTCCAAGACAACTGATGATAAGACCA...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCGACCTACTTTTGAGGTaGTCAGCATCTTCAGTGATG +
Preference number: 5 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFDLLLR*SASSVM
Trigger: CATCACTGAAGATGCTGACAACCTCAAAAGTAGGTC...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGTTCCTTGACCTACTTTaGAGGTTGTCAGCATCTTCA +
Preference number: 5 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILFLDLL*RLSASS
Trigger: TGAAGATGCTGACAACCTCAAAAGTAGGTCAAGGAA...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATCCACAAGGGAATCCATaGACAAATTCCTTGACCTAC +
Preference number: 5 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYPQGNP*TNSLTY
Trigger: GTAGGTCAAGGAATTTGTCAATGGATTCCCTTGTGG...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCCACAAGGGAATCCATaGACAAATTCCTTGACCTAC +
Preference number: 5 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFPQGNP*TNSLTY
Trigger: GTAGGTCAAGGAATTTGTCAATGGATTCCCTTGTGG...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAAAAGGATTCACTGGTGTaGGGCAAAGGAACCACAAGG +
Preference number: 5 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQKDSLV*GKGTTR
Trigger: CCTTGTGGTTCCTTTGCCCAACACCAGTGAATCCTT...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGCTTTTTGATGGCAACTaGGGGCACAAGCAACCTATC +
Preference number: 5 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRLFDGN*GHKQPI
Trigger: GATAGGTTGCTTGTGCCCCAAGTTGCCATCAAAAAG...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATTTGGTAAAGTCCTTTTaGATGGCAACTTGGGGCACA +
Preference number: 5 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYLVKSF*MATWGT
Trigger: TGTGCCCCAAGTTGCCATCAAAAAGGACTTTACCAA...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGTGTCAGCCATGGCTCTaGAATACGTTGTTTCTTGAT +
Preference number: 5 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILCQPWL*NTLFLD
Trigger: ATCAAGAAACAACGTATTCAAGAGCCATGGCTGACA...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS TCA 90 bp TGCTCAAAGAAGCGAACCACCACACCGCCTTCATTCCGAATGACCTaGGTTTCATTTGTTGACAGTGTTGTTTCAGCATCAATAAAATGT +
Preference number: 5 (lower is better)
Translates to: CSKKRTTTPPSFRMT*VSFVDSVVSASIKC
Trigger: ACATTTTATTGATGCTGAAACAACACTGTCAACAAATGAAACTCAGGTCATTCGGAATGAAGGCGGTGTGGTGGTTCGCTTCTTTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS CCA 90 bp ATAAGAAGCTTCTCCTTATTGGTAAAGTCCTTTTTGATGGCAACTTaGGGCACAAGCAACCTATCCATCGGGTCTTCTTTGTTCTCTAGT +
Preference number: 5 (lower is better)
Translates to: IRSFSLLVKSFLMAT*GTSNLSIGSSLFSS
Trigger: ACTAGAGAACAAAGAAGACCCGATGGATAGGTTGCTTGTGCCCCAAGTTGCCATCAAAAAGGACTTTACCAATAAGGAGAAGCTTCTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACAGTCCCAGGAAATCCCTaGCTCTCTTCAGTCGTTTTC +
Preference number: 5 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTVPGNP*LSSVVF
Trigger: GAAAACGACTGAAGAGAGCAAGGGATTTCCTGGGAC...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296978.4
CDS-3UTR CAA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGTGGACGATGACACAATaGACTTGGTTTCACATTTCT +
Preference number: 5 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILWTMTQ*TWFHIS
Trigger: AGAAATGTGAAACCAAGTCAATTGTGTCATCGTCCA...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATATATATCCCTTGCTGTaGTTCCGATCCAACCTAGGC +
Preference number: 5 (lower is better)
Translates to: SWSTLWYPMFSILDISFYIYPLL*FRSNLG
Trigger: GCCTAGGTTGGATCGGAACAACAGCAAGGGATATAT...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATAGTTTCATATATCCCTaGCTGTTGTTCCGATCCAAC +
Preference number: 5 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYSFIYP*LLFRSN
Trigger: GTTGGATCGGAACAACAGCAAGGGATATATGAAACT...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAACTTTTTGATGGCAACTaGGGGCACAAGCAACCTATC +
Preference number: 5 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQLFDGN*GHKQPI
Trigger: GATAGGTTGCTTGTGCCCCAAGTTGCCATCAAAAAG...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGTTGGTAAAGTCCTTTTaGATGGCAACTTGGGGCACA +
Preference number: 5 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRLVKSF*MATWGT
Trigger: TGTGCCCCAAGTTGCCATCAAAAAGGACTTTACCAA...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATTGTCAGCCATGGCTCTaGAATACGTTGTTTCTTGAT +
Preference number: 5 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYCQPWL*NTLFLD
Trigger: ATCAAGAAACAACGTATTCAAGAGCCATGGCTGACA...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAAGGGAATGAGGTGCTATaGGACAGTAACAGATGGCTA +
Preference number: 5 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQGNEVL*DSNRWL
Trigger: TAGCCATCTGTTACTGTCCAATAGCACCTCATTCCC...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATACTCACTGTAATACCTaGCACATGGCTAGTGTTCAA +
Preference number: 5 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYTHCNT*HMASVQ
Trigger: TTGAACACTAGCCATGTGCAAGGTATTACAGTGAGT...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS TCA 90 bp GCATCAAAGCTCATATTCCACTTTCTTTATAAAGCCTTCTCTAGCTaGCCCACTGCACCCTATGCAAGCATTAACTCCTTACAGCATTTT +
Preference number: 5 (lower is better)
Translates to: ASKLIFHFLYKAFSS*PTAPYASINSLQHF
Trigger: AAAATGCTGTAAGGAGTTAATGCTTGCATAGGGTGCAGTGGGTCAGCTAGAGAAGGCTTTATAAAGAAAGTGGAATATGAGCTTTGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS CCA 90 bp CCAGACAGAGGCACCAAGACTCCCAAGGATTGGCAAAATCACATTTaGTGCCAATGTCCTTTAATTCTGTTTAAAGCAATTCAATACTAC +
Preference number: 5 (lower is better)
Translates to: PDRGTKTPKDWQNHI*CQCPLILFKAIQYY
Trigger: GTAGTATTGAATTGCTTTAAACAGAATTAAAGGACATTGGCACCAAATGTGATTTTGCCAATCCTTGGGAGTCTTGGTGCCTCTGTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR CAA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAAGTACATGCCGTTCATTaGCCTTTGCTCCTTGATTCT +
Preference number: 5 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQVHAVH*PLLLDS
Trigger: AGAATCAAGGAGCAAAGGCAAATGAACGGCATGTAC...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATTGGTCTTATCATCAGTaGTCTTGGAAGGAGGTGGAT +
Preference number: 5 (lower is better)
Translates to: SWSTLWYPMFSILDISFYWSYHQ*SWKEVD
Trigger: ATCCACCTCCTTCCAAGACAACTGATGATAAGACCA...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGATGACACAATTGACTaGGTTTCACATTTCTTAGAG +
Preference number: 5 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILDDTID*VSHFLE
Trigger: CTCTAAGAAATGTGAAACCAAGTCAATTGTGTCATC...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATTGGACGATGACACAATaGACTTGGTTTCACATTTCT +
Preference number: 5 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYWTMTQ*TWFHIS
Trigger: AGAAATGTGAAACCAAGTCAATTGTGTCATCGTCCA...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAAGACCTACTTTTGAGGTaGTCAGCATCTTCAGTGATG +
Preference number: 5 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQDLLLR*SASSVM
Trigger: CATCACTGAAGATGCTGACAACCTCAAAAGTAGGTC...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACAATATATCCCTTGCTGTaGTTCCGATCCAACCTAGGC +
Preference number: 5 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTIYPLL*FRSNLG
Trigger: GCCTAGGTTGGATCGGAACAACAGCAAGGGATATAT...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACACTTTTTGATGGCAACTaGGGGCACAAGCAACCTATC +
Preference number: 5 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTLFDGN*GHKQPI
Trigger: GATAGGTTGCTTGTGCCCCAAGTTGCCATCAAAAAG...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGAGAAGCTTCTCCTTATaGGTAAAGTCCTTTTTGATG +
Preference number: 5 (lower is better)
Translates to: GLNLYSWSTLWYPMFSILRSFSL*VKSFLM
Trigger: CATCAAAAAGGACTTTACCAATAAGGAGAAGCTTCT...CAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTCCCCTCTTTAGGTaGTTACTCAAAAACTCATCA +
Preference number: 5 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYVPLFR*LLKNSS
Trigger: TGATGAGTTTTTGAGTAACAACCTAAAGAGGGGAAC...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAAGTATTGGGACTGAATTaGTACTCCTGGTCCACACTT +
Preference number: 5 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQVLGLN*YSWSTL
Trigger: AAGTGTGGACCAGGAGTACAAATTCAGTCCCAATAC...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATTCTCATCTTGCAGCATaGAGCTCTCCTTTTGAATTT +
Preference number: 5 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYSHLAA*SSPFEF
Trigger: AAATTCAAAAGGAGAGCTCAATGCTGCAAGATGAGA...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS GCA 90 bp GACAGAGGCACCAAGACTCCCAAGGATTGGCAAAATCACATTTGGTaGCAATGTCCTTTAATTCTGTTTAAAGCAATTCAATACTACAGA +
Preference number: 5 (lower is better)
Translates to: DRGTKTPKDWQNHIW*QCPLILFKAIQYYR
Trigger: TCTGTAGTATTGAATTGCTTTAAACAGAATTAAAGGACATTGGCACCAAATGTGATTTTGCCAATCCTTGGGAGTCTTGGTGCCTCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR CAA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGATGACACAATTGACTaGGTTTCACATTTCTTAGAG +
Preference number: 5 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYDDTID*VSHFLE
Trigger: CTCTAAGAAATGTGAAACCAAGTCAATTGTGTCATC...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACAGACCTACTTTTGAGGTaGTCAGCATCTTCAGTGATG +
Preference number: 5 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTDLLLR*SASSVM
Trigger: CATCACTGAAGATGCTGACAACCTCAAAAGTAGGTC...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATTTCCTTGACCTACTTTaGAGGTTGTCAGCATCTTCA +
Preference number: 5 (lower is better)
Translates to: SWSTLWYPMFSILDISFYFLDLL*RLSASS
Trigger: TGAAGATGCTGACAACCTCAAAAGTAGGTCAAGGAA...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACACCACAAGGGAATCCATaGACAAATTCCTTGACCTAC +
Preference number: 5 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTPQGNP*TNSLTY
Trigger: GTAGGTCAAGGAATTTGTCAATGGATTCCCTTGTGG...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAAAGTTTCATATATCCCTaGCTGTTGTTCCGATCCAAC +
Preference number: 5 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQSFIYP*LLFRSN
Trigger: GTTGGATCGGAACAACAGCAAGGGATATATGAAACT...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GTATTGAGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATAGAAGCTTCTCCTTATaGGTAAAGTCCTTTTTGATG +
Preference number: 5 (lower is better)
Translates to: VLSIGTEFVLLVHTLVPYRSFSL*VKSFLM
Trigger: CATCAAAAAGGACTTTACCAATAAGGAGAAGCTTCT...ATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACTCAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGGTTCCCCTCTTTAGGTaGTTACTCAAAAACTCATCA +
Preference number: 5 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRVPLFR*LLKNSS
Trigger: TGATGAGTTTTTGAGTAACAACCTAAAGAGGGGAAC...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACAGTATTGGGACTGAATTaGTACTCCTGGTCCACACTT +
Preference number: 5 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTVLGLN*YSWSTL
Trigger: AAGTGTGGACCAGGAGTACAAATTCAGTCCCAATAC...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATTGTCAGCCATGGCTCTaGAATACGTTGTTTCTTGAT +
Preference number: 5 (lower is better)
Translates to: SWSTLWYPMFSILDISFYCQPWL*NTLFLD
Trigger: ATCAAGAAACAACGTATTCAAGAGCCATGGCTGACA...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACAGCCAAGTCTTGGGAGTaGGCAAATGCTATTCCTAAA +
Preference number: 5 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTAKSWE*ANAIPK
Trigger: TTTAGGAATAGCATTTGCCAACTCCCAAGACTTGGC...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR CAA 90 bp AGTATTGGGACTGAATTTGTACTCCTGGTCCACACTTTGGTACCCTATGTTTTCTTGGCAAAATCACATTaGGTGCCAATGTCCTTTAAT +
Preference number: 5 (lower is better)
Translates to: SIGTEFVLLVHTLVPYVFLAKSH*VPMSFN
Trigger: ATTAAAGGACATTGGCACCAAATGTGATTTTGCCAA...GAAAACATAGGGTACCAAAGTGTGGACCAGGAGTACAAATTCAGTCCCAATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR CAA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACACAAGACTCCCAAGGATaGGCAAAATCACATTTGGTG +
Preference number: 5 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTQDSQG*AKSHLV
Trigger: CACCAAATGTGATTTTGCCAATCCTTGGGAGTCTTG...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR CAA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAATCTTCTTGTGGTCTGTaGGATGACCACCATATTACT +
Preference number: 5 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQSSCGL*DDHHIT
Trigger: AGTAATATGGTGGTCATCCAACAGACCACAAGAAGA...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR CAA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAACTCATGTGTATGATTTaGGTCTCTTTGTCACGGTTT +
Preference number: 5 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQLMCMI*VSLSRF
Trigger: AAACCGTGACAAAGAGACCAAAATCATACACATGAG...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGGATGACACAATTGACTaGGTTTCACATTTCTTAGAG +
Preference number: 5 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRDDTID*VSHFLE
Trigger: CTCTAAGAAATGTGAAACCAAGTCAATTGTGTCATC...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAATGGACGATGACACAATaGACTTGGTTTCACATTTCT +
Preference number: 5 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQWTMTQ*TWFHIS
Trigger: AGAAATGTGAAACCAAGTCAATTGTGTCATCGTCCA...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACATTCCTTGACCTACTTTaGAGGTTGTCAGCATCTTCA +
Preference number: 5 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTFLDLL*RLSASS
Trigger: TGAAGATGCTGACAACCTCAAAAGTAGGTCAAGGAA...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACAAGTTTCATATATCCCTaGCTGTTGTTCCGATCCAAC +
Preference number: 5 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTSFIYP*LLFRSN
Trigger: GTTGGATCGGAACAACAGCAAGGGATATATGAAACT...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp GTATTATACCGTAAGAAAGTCTTTGGAGTTATCATAAGGCTCTCCAGCACAAGGAGAAGCTTCTCCTTATaGGTAAAGTCCTTTTTGATG +
Preference number: 5 (lower is better)
Translates to: VLYRKKVFGVIIRLSSTRRSFSL*VKSFLM
Trigger: CATCAAAAAGGACTTTACCAATAAGGAGAAGCTTCT...CCTTGTGCTGGAGAGCCTTATGATAACTCCAAAGACTTTCTTACGGTATAATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAATCCATCGGGTCTTCTTaGTTCTCTAGTTTCATATAT +
Preference number: 5 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQSIGSS*FSSFIY
Trigger: ATATATGAAACTAGAGAACAAAGAAGACCCGATGGA...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp TCCTGGTCCACACTTTGGTACCCTATGTTTTCCATACTGGACATTTCATTTTATTCCATCGGGTCTTCTTaGTTCTCTAGTTTCATATAT +
Preference number: 5 (lower is better)
Translates to: SWSTLWYPMFSILDISFYSIGSS*FSSFIY
Trigger: ATATATGAAACTAGAGAACAAAGAAGACCCGATGGA...ATAAAATGAAATGTCCAGTATGGAAAACATAGGGTACCAAAGTGTGGACCAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACAGTTCCCCTCTTTAGGTaGTTACTCAAAAACTCATCA +
Preference number: 5 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTVPLFR*LLKNSS
Trigger: TGATGAGTTTTTGAGTAACAACCTAAAGAGGGGAAC...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS-3UTR CAA 90 bp TGGAGTTATCATAAGGCTCTCCAGCACAAGGTAAACTTCAAGGCAATTTATCAAGGTCAGTTCTCAGATTaGGCTCTTTACAGTTATTTT +
Preference number: 5 (lower is better)
Translates to: WSYHKALQHKVNFKAIYQGQFSD*ALYSYF
Trigger: AAAATAACTGTAAAGAGCCAAATCTGAGAACTGACC...TTGATAAATTGCCTTGAAGTTTACCTTGTGCTGGAGAGCCTTATGATAACTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS-3UTR CAA 90 bp AAAATAGAATGTGGGAATGAGGTGCTATTGGACAGTAACAGATGGCTAAAAACATCCATCGGGTCTTCTTaGTTCTCTAGTTTCATATAT +
Preference number: 5 (lower is better)
Translates to: KIECGNEVLLDSNRWLKTSIGSS*FSSFIY
Trigger: ATATATGAAACTAGAGAACAAAGAAGACCCGATGGA...TGTTTTTAGCCATCTGTTACTGTCCAATAGCACCTCATTCCCACATTCTATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS GCA 72 bp CCGGAGGCCTCGGGGCAGGGGATGCGCCGCTGCCGGTaGTCACAGAGGGCCGCCGCCATCCGGGCGCAGAGT +
Preference number: 6 (lower is better)
Translates to: PEASGQGMRRCR*SQRAAAIRAQS
Trigger: ACTCTGCGCCCGGATGGCGGCGGCCCTCTGTGAGCACCGGCAGCGGCGCATCCCCTGCCCCGAGGCCTCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296978.4
CDS CCA 72 bp TCTCACTCCAGGAGCTGTCGGGACGTCGGGCGCCTCTaGAGGCGGACGAAGAAGGCGGCAGGGTCGGGGGCG +
Preference number: 6 (lower is better)
Translates to: SHSRSCRDVGRL*RRTKKAAGSGA
Trigger: CGCCCCCGACCCTGCCGCCTTCTTCGTCCGCCTCCAGAGGCGCCCGACGTCCCGACAGCTCCTGGAGTGAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296978.4
ENST00000617887.4
CDS CCA 72 bp TCAGCGGCTCTGTGTGCTGTCCTGAGCACCGGGCCCTaGGGGTCGGGTCGCCTCTCCCTGTTCTCAGTCCTG +
Preference number: 6 (lower is better)
Translates to: SAALCAVLSTGP*GSGRLSLFSVL
Trigger: CAGGACTGAGAACAGGGAGAGGCGACCCGACCCCCAGGGCCCGGTGCTCAGGACAGCACACAGAGCCGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296978.4
CDS CCA 72 bp TCTGCCCGGGGCCGGCGCCTGATGGGCTTCTTCTCTTaGGTAGCAGGAGACGGGCTGAGGTTGACATGCTGC +
Preference number: 6 (lower is better)
Translates to: SARGRRLMGFFS*VAGDGLRLTCC
Trigger: GCAGCATGTCAACCTCAGCCCGTCTCCTGCTACCCAAGAGAAGAAGCCCATCAGGCGCCGGCCCCGGGCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS CCA 72 bp AGCTTGGCCTTTTACTCTGTCCTGAGCACCGGGCCCTaGGGGTCGGGTCGCCTCTCCCTGTTCTCAGTCCTG +
Preference number: 6 (lower is better)
Translates to: SLAFYSVLSTGP*GSGRLSLFSVL
Trigger: CAGGACTGAGAACAGGGAGAGGCGACCCGACCCCCAGGGCCCGGTGCTCAGGACAGAGTAAAAGGCCAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617887.4
CDS CAA 72 bp ATCTGCCCGGGGCCGGCGCCTGATGGGCTTCTTCTCTaGGGTAGCAGGAGACGGGCTGAGGTTGACATGCTG +
Preference number: 6 (lower is better)
Translates to: ICPGPAPDGLLL*GSRRRAEVDML
Trigger: CAGCATGTCAACCTCAGCCCGTCTCCTGCTACCCAAGAGAAGAAGCCCATCAGGCGCCGGCCCCGGGCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS TCA 72 bp GGTAGCAGGAGACGGGCTGAGGTTGACATGCTGCTGTaGTCTGGCAGAGTCTTGCCTTTTCAAGGCGGCCAG +
Preference number: 6 (lower is better)
Translates to: GSRRRAEVDMLL*SGRVLPFQGGQ
Trigger: CTGGCCGCCTTGAAAAGGCAAGACTCTGCCAGATCACAGCAGCATGTCAACCTCAGCCCGTCTCCTGCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS GCA 72 bp ATAAAGCCGGATTTTGCCACGAACAACCACAACATCTaGCCGGGGCCGGCGCCTGATGGGCTTCTTCTCTTG +
Preference number: 6 (lower is better)
Translates to: IKPDFATNNHNI*PGPAPDGLLLL
Trigger: CAAGAGAAGAAGCCCATCAGGCGCCGGCCCCGGGCAGATGTTGTGGTTGTTCGTGGCAAAATCCGGCTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS TCA 72 bp CAAGAGCTGTCCAGCCCCAGGTCCGAGAGCCATAGATaGCTTGTACTGACTCGACAACGACTCCCCAATGGA +
Preference number: 6 (lower is better)
Translates to: QELSSPRSESHR*LVLTRQRLPNG
Trigger: TCCATTGGGGAGTCGTTGTCGAGTCAGTACAAGTCATCTATGGCTCTCGGACCTGGGGCTGGACAGCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS GCA 72 bp TCTTGGGTAGCAGGAGACGGGCTGAGGTTGACATGCTaGTGTGATCTGGCAGAGTCTTGCCTTTTCAAGGCG +
Preference number: 6 (lower is better)
Translates to: SWVAGDGLRLTC*CDLAESCLFKA
Trigger: CGCCTTGAAAAGGCAAGACTCTGCCAGATCACAGCAGCATGTCAACCTCAGCCCGTCTCCTGCTACCCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS CCA 72 bp GCAAATGCAAGGATGTATTGGACCCAAACTGTCTTCTaGCAGCCCCAGGAGACAAGAGCTGTCCAGCCCCAG +
Preference number: 6 (lower is better)
Translates to: ANARMYWTQTVF*QPQETRAVQPQ
Trigger: CTGGGGCTGGACAGCTCTTGTCTCCTGGGGCTGCCAGAAGACAGTTTGGGTCCAATACATCCTTGCATTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS CAA 72 bp CAGGCCAGTTATCACTCCACCAGTTGCTATCATAGCTaGGCCTTTTACTCTGTCCTGAGCACCGGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: QASYHSTSCYHS*AFYSVLSTGPW
Trigger: CCAGGGCCCGGTGCTCAGGACAGAGTAAAAGGCCAAGCTATGATAGCAACTGGTGGAGTGATAACTGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617887.4
CDS GCA 72 bp ACTGCTCCGAAAACCCGAGAAAGAGGCGATCGTATTTaGTGCCAATCTCGAGGCACAGGAGCTCCCATTCTG +
Preference number: 6 (lower is better)
Translates to: TAPKTRERGDRI*CQSRGTGAPIL
Trigger: CAGAATGGGAGCTCCTGTGCCTCGAGATTGGCAGCAAATACGATCGCCTCTTTCTCGGGTTTTCGGAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS CAA 90 bp AGCTTGGCCTTTTACTCTCCAGAGCCAGATGTCCCAGGAAATCCCTaGCTCTCTTCAGTCGTTTTCAGCGGCTCTGTGTGCTGTCCTGAG +
Preference number: 6 (lower is better)
Translates to: SLAFYSPEPDVPGNP*LSSVVFSGSVCCPE
Trigger: CTCAGGACAGCACACAGAGCCGCTGAAAACGACTGAAGAGAGCAAGGGATTTCCTGGGACATCTGGCTCTGGAGAGTAAAAGGCCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296978.4
CDS TCA 72 bp AACCTAGGCCAACTTGGATGTTTCCGTTGTTCTGCCTaGACAGTTAGAGTGGAGGGACCCCGGTCTAAGTCC +
Preference number: 6 (lower is better)
Translates to: NLGQLGCFRCSA*TVRVEGPRSKS
Trigger: GGACTTAGACCGGGGTCCCTCCACTCTAACTGTTCAGGCAGAACAACGGAAACATCCAAGTTGGCCTAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS TCA 72 bp TCGGGAATGCAAATTCATGGTTCCACTTCTCCCTACTaGATCAGAAGCGCTGGACCAAGCGGGCCCAGCAAA +
Preference number: 6 (lower is better)
Translates to: SGMQIHGSTSPY*IRSAGPSGPSK
Trigger: TTTGCTGGGCCCGCTTGGTCCAGCGCTTCTGATTCAGTAGGGAGAAGTGGAACCATGAATTTGCATTCCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545622.5
CDS GCA 72 bp TTCTCTTGGGTAGCAGGAGACGGGCTGAGGTTGACATaGTGCTGTGATCTGGCAGAGTCTTGCCTTTTCAAG +
Preference number: 6 (lower is better)
Translates to: FSWVAGDGLRLT*CCDLAESCLFK
Trigger: CTTGAAAAGGCAAGACTCTGCCAGATCACAGCAGCATGTCAACCTCAGCCCGTCTCCTGCTACCCAAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS GCA 72 bp GCTCCGAAAACCCGAGAAAGAGGCGATCGTATTTGCTaGCAATCTCGAGGCACAGGAGCTCCCATTCTGTTT +
Preference number: 6 (lower is better)
Translates to: APKTRERGDRIC*QSRGTGAPILF
Trigger: AAACAGAATGGGAGCTCCTGTGCCTCGAGATTGGCAGCAAATACGATCGCCTCTTTCTCGGGTTTTCGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS CAA 72 bp AACTGCTCCGAAAACCCGAGAAAGAGGCGATCGTATTaGCTGCCAATCTCGAGGCACAGGAGCTCCCATTCT +
Preference number: 6 (lower is better)
Translates to: NCSENPRKRRSY*LPISRHRSSHS
Trigger: AGAATGGGAGCTCCTGTGCCTCGAGATTGGCAGCAAATACGATCGCCTCTTTCTCGGGTTTTCGGAGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS CAA 90 bp CAAGGCGGCCAGGCCAGTTATCACTCCACCAGTTGCTATCATAGCTaGGCCTTTTACTCTTCTAGCACACACCAGCTGCACCACTTGACT +
Preference number: 6 (lower is better)
Translates to: QGGQASYHSTSCYHS*AFYSSSTHQLHHLT
Trigger: AGTCAAGTGGTGCAGCTGGTGTGTGCTAGAAGAGTAAAAGGCCAAGCTATGATAGCAACTGGTGGAGTGATAACTGGCCTGGCCGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS TCA 72 bp CCAGCCCCAGGTCCGAGAGCCATAGATGACTTGTACTaGCTCGACAACGACTCCCCAATGGAATTATTCCTT +
Preference number: 6 (lower is better)
Translates to: PAPGPRAIDDLY*LDNDSPMELFL
Trigger: AAGGAATAATTCCATTGGGGAGTCGTTGTCGAGTCAGTACAAGTCATCTATGGCTCTCGGACCTGGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS GCA 72 bp TTTACTCTCCAGAGCCAGATGTCCCAGGAAATCCCTTaGTCTCTTCAGTCGTTTTCAGCGGCTCTGTGTGCT +
Preference number: 6 (lower is better)
Translates to: FTLQSQMSQEIP*SLQSFSAALCA
Trigger: AGCACACAGAGCCGCTGAAAACGACTGAAGAGAGCAAGGGATTTCCTGGGACATCTGGCTCTGGAGAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296978.4
CDS GCA 72 bp TTTCAAGGCGGCCAGGCCAGTTATCACTCCACCAGTTaGTATCATAGCTTGGCCTTTTACTCTCCAGAGCCA +
Preference number: 6 (lower is better)
Translates to: FQGGQASYHSTS*YHSLAFYSPEP
Trigger: TGGCTCTGGAGAGTAAAAGGCCAAGCTATGATAGCAACTGGTGGAGTGATAACTGGCCTGGCCGCCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296978.4
CDS GCA 72 bp TTTCAAGGCGGCCAGGCCAGTTATCACTCCACCAGTTaGTATCATAGCTTGGCCTTTTACTCTGTCCTGAGC +
Preference number: 6 (lower is better)
Translates to: FQGGQASYHSTS*YHSLAFYSVLS
Trigger: GCTCAGGACAGAGTAAAAGGCCAAGCTATGATAGCAACTGGTGGAGTGATAACTGGCCTGGCCGCCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617887.4
CDS CCA 72 bp TCATGGTTCCACTTCTCCCTACTGAATCAGAAGCGCTaGACCAAGCGGGCCCAGCAAACTGGTTTCATAAGT +
Preference number: 6 (lower is better)
Translates to: SWFHFSLLNQKR*TKRAQQTGFIS
Trigger: ACTTATGAAACCAGTTTGCTGGGCCCGCTTGGTCCAGCGCTTCTGATTCAGTAGGGAGAAGTGGAACCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545622.5
CDS CAA 72 bp TTTTACTCTCCAGAGCCAGATGTCCCAGGAAATCCCTaGCTCTCTTCAGTCGTTTTCAGCGGCTCTGTGTGC +
Preference number: 6 (lower is better)
Translates to: FYSPEPDVPGNP*LSSVVFSGSVC
Trigger: GCACACAGAGCCGCTGAAAACGACTGAAGAGAGCAAGGGATTTCCTGGGACATCTGGCTCTGGAGAGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296978.4
CDS CAA 90 bp CCTGAACAGTTAGAGTGGAGGGACCCCGGTCTAAGTCCAAGGACTTaGAGTGTGACGAGAGCAAATGCAAGGATGTATTGGACCCAAACT +
Preference number: 6 (lower is better)
Translates to: PEQLEWRDPGLSPRT*SVTRANARMYWTQT
Trigger: AGTTTGGGTCCAATACATCCTTGCATTTGCTCTCGTCACACTCAAAGTCCTTGGACTTAGACCGGGGTCCCTCCACTCTAACTGTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS CCA 72 bp ACTTTGAGTGTGACGAGAGCAAATGCAAGGATGTATTaGACCCAAACTGTCTTCTGGCAGCCCCAGGAGACA +
Preference number: 6 (lower is better)
Translates to: TLSVTRANARMY*TQTVFWQPQET
Trigger: TGTCTCCTGGGGCTGCCAGAAGACAGTTTGGGTCCAATACATCCTTGCATTTGCTCTCGTCACACTCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS CCA 72 bp TTGGATGTTTCCGTTGTTCTGCCTGAACAGTTAGAGTaGAGGGACCCCGGTCTAAGTCCAAGGACTTTGAGT +
Preference number: 6 (lower is better)
Translates to: LDVSVVLPEQLE*RDPGLSPRTLS
Trigger: ACTCAAAGTCCTTGGACTTAGACCGGGGTCCCTCCACTCTAACTGTTCAGGCAGAACAACGGAAACATCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS CCA 72 bp AGGCCAGTTATCACTCCACCAGTTGCTATCATAGCTTaGCCTTTTACTCTTCTAGCACACACCAGCTGCACC +
Preference number: 6 (lower is better)
Translates to: RPVITPPVAIIA*PFTLLAHTSCT
Trigger: GGTGCAGCTGGTGTGTGCTAGAAGAGTAAAAGGCCAAGCTATGATAGCAACTGGTGGAGTGATAACTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS CAA 72 bp TTAGAGTGGAGGGACCCCGGTCTAAGTCCAAGGACTTaGAGTGTGACGAGAGCAAATGCAAGGATGTATTGG +
Preference number: 6 (lower is better)
Translates to: LEWRDPGLSPRT*SVTRANARMYW
Trigger: CCAATACATCCTTGCATTTGCTCTCGTCACACTCAAAGTCCTTGGACTTAGACCGGGGTCCCTCCACTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS CAA 72 bp AGGTCAAGGGAAAGAAAGCAGTCCAGGAATAGGAACTaGGCCAGCACACAACTCAGTACTACAGGAGGTCAG +
Preference number: 6 (lower is better)
Translates to: RSRERKQSRNRN*ASTQLSTTGGQ
Trigger: CTGACCTCCTGTAGTACTGAGTTGTGTGCTGGCCAAGTTCCTATTCCTGGACTGCTTTCTTTCCCTTGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS CAA 72 bp CAGGCCAGTTATCACTCCACCAGTTGCTATCATAGCTaGGCCTTTTACTCTTCTAGCACACACCAGCTGCAC +
Preference number: 6 (lower is better)
Translates to: QASYHSTSCYHS*AFYSSSTHQLH
Trigger: GTGCAGCTGGTGTGTGCTAGAAGAGTAAAAGGCCAAGCTATGATAGCAACTGGTGGAGTGATAACTGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS GCA 72 bp TTTCAAGGCGGCCAGGCCAGTTATCACTCCACCAGTTaGTATCATAGCTTGGCCTTTTACTCTTCTAGCACA +
Preference number: 6 (lower is better)
Translates to: FQGGQASYHSTS*YHSLAFYSSST
Trigger: TGTGCTAGAAGAGTAAAAGGCCAAGCTATGATAGCAACTGGTGGAGTGATAACTGGCCTGGCCGCCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS CCA 72 bp CCCACTGCCCTGCCCTGTTCTTCACATACCCACATCTaGCTAGGCATCAAAGCTCATATTCCACTTTCTTTA +
Preference number: 6 (lower is better)
Translates to: PTALPCSSHTHI*LGIKAHIPLSL
Trigger: TAAAGAAAGTGGAATATGAGCTTTGATGCCTAGCCAGATGTGGGTATGTGAAGAACAGGGCAGGGCAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS CCA 72 bp GGTATAACCTGTGAGCTTGTCGGGAATGCAAATTCATaGTTCCACTTCTCCCTACTGAATCAGAAGCGCTGG +
Preference number: 6 (lower is better)
Translates to: GITCELVGNANS*FHFSLLNQKRW
Trigger: CCAGCGCTTCTGATTCAGTAGGGAGAAGTGGAACCATGAATTTGCATTCCCGACAAGCTCACAGGTTATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545622.5
CDS CAA 90 bp TTTCAAGGAAGGTCAAGGGAAAGAAAGCAGTCCAGGAATAGGAACTaGGCCAGCACACAACTCAGTACTACAGGAGGTCAGTTAGGTAAG +
Preference number: 6 (lower is better)
Translates to: FQGRSRERKQSRNRN*ASTQLSTTGGQLGK
Trigger: CTTACCTAACTGACCTCCTGTAGTACTGAGTTGTGTGCTGGCCAAGTTCCTATTCCTGGACTGCTTTCTTTCCCTTGACCTTCCTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS TCA 72 bp ATACAATCCTCGGGCCAGCAACACTGGTATAACCTGTaGGCTTGTCGGGAATGCAAATTCATGGTTCCACTT +
Preference number: 6 (lower is better)
Translates to: IQSSGQQHWYNL*ACRECKFMVPL
Trigger: AAGTGGAACCATGAATTTGCATTCCCGACAAGCTCACAGGTTATACCAGTGTTGCTGGCCCGAGGATTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545622.5
CDS CCA 72 bp GGACGTAAGGAGGTAAGAGAACAAGAAGAGTTCAGATaGAGTAATGCTGCCCAAAATACAATCCTCGGGCCA +
Preference number: 6 (lower is better)
Translates to: GRKEVREQEEFR*SNAAQNTILGP
Trigger: TGGCCCGAGGATTGTATTTTGGGCAGCATTACTCCATCTGAACTCTTCTTGTTCTCTTACCTCCTTACGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545622.5
CDS TCA 72 bp CAAAGAAGCGAACCACCACACCGCCTTCATTCCGAATaGCCTGAGTTTCATTTGTTGACAGTGTTGTTTCAG +
Preference number: 6 (lower is better)
Translates to: QRSEPPHRLHSE*PEFHLLTVLFQ
Trigger: CTGAAACAACACTGTCAACAAATGAAACTCAGGTCATTCGGAATGAAGGCGGTGTGGTGGTTCGCTTCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS TCA 72 bp AGGCTCTATTATCACTCAGGGTCCCAATGTAGACCCTaGGAGGAAAGCAAAGGTGAGCAAATTCAATCACTG +
Preference number: 6 (lower is better)
Translates to: RLYYHSGSQCRP*EESKGEQIQSL
Trigger: CAGTGATTGAATTTGCTCACCTTTGCTTTCCTCTCAGGGTCTACATTGGGACCCTGAGTGATAATAGAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS GCA 72 bp TCTAAGTCCAAGGACTTTGAGTGTGACGAGAGCAAATaGAAGGATGTATTGGACCCAAACTGTCTTCTGGCA +
Preference number: 6 (lower is better)
Translates to: SKSKDFECDESK*KDVLDPNCLLA
Trigger: TGCCAGAAGACAGTTTGGGTCCAATACATCCTTGCATTTGCTCTCGTCACACTCAAAGTCCTTGGACTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS GCA 72 bp TTTCAAGGCGGCCAGGCCAGTTATCACTCCACCAGTTaGTATCATAGCTTGGCCTTTTACTCTGAGAATAAA +
Preference number: 6 (lower is better)
Translates to: FQGGQASYHSTS*YHSLAFYSENK
Trigger: TTTATTCTCAGAGTAAAAGGCCAAGCTATGATAGCAACTGGTGGAGTGATAACTGGCCTGGCCGCCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545622.5
CDS CCA 72 bp TTCTCCTTATTGGTAAAGTCCTTTTTGATGGCAACTTaGGGCACAAGCAACCTATCCATCGGGTCTTCTTTG +
Preference number: 6 (lower is better)
Translates to: FSLLVKSFLMAT*GTSNLSIGSSL
Trigger: CAAAGAAGACCCGATGGATAGGTTGCTTGTGCCCCAAGTTGCCATCAAAAAGGACTTTACCAATAAGGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS CAA 72 bp CTTCTCCTTATTGGTAAAGTCCTTTTTGATGGCAACTaGGGGCACAAGCAACCTATCCATCGGGTCTTCTTT +
Preference number: 6 (lower is better)
Translates to: LLLIGKVLFDGN*GHKQPIHRVFF
Trigger: AAAGAAGACCCGATGGATAGGTTGCTTGTGCCCCAAGTTGCCATCAAAAAGGACTTTACCAATAAGGAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS CAA 90 bp ATCACAGGCAATGTAAAAGCACTGATGGACGATGACACAATTGACTaGGTTTCACATTTCTTAGAGCCGCTGGTCTTATCATCAGTTGTC +
Preference number: 6 (lower is better)
Translates to: ITGNVKALMDDDTID*VSHFLEPLVLSSVV
Trigger: GACAACTGATGATAAGACCAGCGGCTCTAAGAAATGTGAAACCAAGTCAATTGTGTCATCGTCCATCAGTGCTTTTACATTGCCTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS CAA 90 bp GATCTTGAAATCATAAGAAGCTTCTCCTTATTGGTAAAGTCCTTTTaGATGGCAACTTGGGGCACAAGCAACCTATCCATCGGGTCTTCT +
Preference number: 6 (lower is better)
Translates to: DLEIIRSFSLLVKSF*MATWGTSNLSIGSS
Trigger: AGAAGACCCGATGGATAGGTTGCTTGTGCCCCAAGTTGCCATCAAAAAGGACTTTACCAATAAGGAGAAGCTTCTTATGATTTCAAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS TCA 72 bp CTCATATTCCACTTTCTTTATAAAGCCTTCTCTAGCTaGCCCACTGCACCCTATGCAAGCATTAACTCCTTA +
Preference number: 6 (lower is better)
Translates to: LIFHFLYKAFSS*PTAPYASINSL
Trigger: TAAGGAGTTAATGCTTGCATAGGGTGCAGTGGGTCAGCTAGAGAAGGCTTTATAAAGAAAGTGGAATATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS CAA 72 bp ATCATAAGAAGCTTCTCCTTATTGGTAAAGTCCTTTTaGATGGCAACTTGGGGCACAAGCAACCTATCCATC +
Preference number: 6 (lower is better)
Translates to: IIRSFSLLVKSF*MATWGTSNLSI
Trigger: GATGGATAGGTTGCTTGTGCCCCAAGTTGCCATCAAAAAGGACTTTACCAATAAGGAGAAGCTTCTTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS CCA 72 bp GACAGTGTTGTTTCAGCATCAATAAAATGTTCTTTTTaGGGCCAATATCCAAGAACGGCCATAGCAATTCCT +
Preference number: 6 (lower is better)
Translates to: DSVVSASIKCSF*GQYPRTAIAIP
Trigger: AGGAATTGCTATGGCCGTTCTTGGATATTGGCCCCAAAAAGAACATTTTATTGATGCTGAAACAACACTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS CAA 72 bp AATGTAAAAGCACTGATGGACGATGACACAATTGACTaGGTTTCACATTTCTTAGAGCCGCTGGTCTTATCA +
Preference number: 6 (lower is better)
Translates to: NVKALMDDDTID*VSHFLEPLVLS
Trigger: TGATAAGACCAGCGGCTCTAAGAAATGTGAAACCAAGTCAATTGTGTCATCGTCCATCAGTGCTTTTACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS TCA 72 bp GGCTTGTGGTTGTTATCTACAGTTTTAACAAGCCAGTaGGTAAATCCAGCCTTCAGTGAAATTATAACTAGG +
Preference number: 6 (lower is better)
Translates to: GLWLLSTVLTSQ*VNPAFSEIITR
Trigger: CCTAGTTATAATTTCACTGAAGGCTGGATTTACTCACTGGCTTGTTAAAACTGTAGATAACAACCACAAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS CAA 90 bp TCTGTATTTCTCATTCATATTCCATTTTGTACCATTTCTGAGATTTaGTTAACAATGTTTCAGCTGTCCAGAATCCACCCACTCCCCACT +
Preference number: 6 (lower is better)
Translates to: SVFLIHIPFCTISEI*LTMFQLSRIHPLPT
Trigger: AGTGGGGAGTGGGTGGATTCTGGACAGCTGAAACATTGTTAACAAAATCTCAGAAATGGTACAAAATGGAATATGAATGAGAAATACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS CAA 90 bp GTGATGTTATCTATACTGGGCTCATCAATAACACAGTTATTAAGTTaGATCACAGGCAATGTAAAAGCACTGATGGACGATGACACAATT +
Preference number: 6 (lower is better)
Translates to: VMLSILGSSITQLLS*ITGNVKALMDDDTI
Trigger: AATTGTGTCATCGTCCATCAGTGCTTTTACATTGCCTGTGATCAAACTTAATAACTGTGTTATTGATGAGCCCAGTATAGATAACATCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296978.4
ENST00000392429.1
ENST00000545622.5
ENST00000617887.4
CDS CAA 72 bp GAGTTTCTTCAGGGCATCAAATCTCATCTTGCAGCATaGAGCTCTCCTTTTGAATTTCTATTTATGATTTCT +
Preference number: 6 (lower is better)
Translates to: EFLQGIKSHLAA*SSPFEFLFMIS
Trigger: AGAAATCATAAATAGAAATTCAAAAGGAGAGCTCAATGCTGCAAGATGAGATTTGATGCCCTGAAGAAACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392429.1
CDS CAA 72 bp CTCATTCATATTCCATTTTGTACCATTTCTGAGATTTaGTTAACAATGTTTCAGCTGTCCAGAATCCACCCA +
Preference number: 6 (lower is better)
Translates to: LIHIPFCTISEI*LTMFQLSRIHP
Trigger: TGGGTGGATTCTGGACAGCTGAAACATTGTTAACAAAATCTCAGAAATGGTACAAAATGGAATATGAATGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392429.1