RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM199 (Homo sapiens)

Ensembl gene IDs: ENSG00000244045

Ensembl transcript IDs: ENST00000292114.8, ENST00000395404.7, ENST00000483505.6, ENST00000509083.2, ENST00000555264.6, ENST00000579762.1, ENST00000580868.5, ENST00000581386.5, ENST00000585027.1

Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTAATTGAAGGGTTTAGGACTCTGACTGACAAGACCCTGGGGAGATaGGAGCCTCTGCTAGCACCCCCAGCTCCTGGTCCCACTGAATCT +
Preference number: 1 (lower is better)
Translates to: LIEGFRTLTDKTLGR*EPLLAPPAPGPTES
Trigger: AGATTCAGTGGGACCAGGAGCTGGGGGTGCTAGCAGAGGCTCTCATCTCCCCAGGGTCTTGTCAGTCAGAGTCCTAAACCCTTCAATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR GCA 90 bp GTCCCACTGAATCTAGGACATTCCAGTCACCTCCACCTCTGGAGCTaGTCTGCTTTGGAGAGAAAACCATGGTGTTTGCGGTCTGCACTG +
Preference number: 1 (lower is better)
Translates to: VPLNLGHSSHLHLWS*SALERKPWCLRSAL
Trigger: CAGTGCAGACCGCAAACACCATGGTTTTCTCTCCAAAGCAGAGCAGCTCCAGAGGTGGAGGTGACTGGAATGTCCTAGATTCAGTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR CCA 90 bp GGACCCAGAGTGCATTACAGAAAGCATGGCACAGTGAGGCAGGAGTaGCTAGCAGATGAGAGAGCTCCCTTCTATATGCTGAGAACTGGA +
Preference number: 1 (lower is better)
Translates to: GPRVHYRKHGTVRQE*LADERAPFYMLRTG
Trigger: TCCAGTTCTCAGCATATAGAAGGGAGCTCTCTCATCTGCTAGCCACTCCTGCCTCACTGTGCCATGCTTTCTGTAATGCACTCTGGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR TCA 90 bp ATTAGGGCTCCCCACAGAAACAGCAGCTGGCCTGGGCTGGTCTTCTaGCTAACTGGAGCTGAATACAAAAAGTCTGATGGGTTGACTGAG +
Preference number: 1 (lower is better)
Translates to: IRAPHRNSSWPGLVF*LTGAEYKKSDGLTE
Trigger: CTCAGTCAACCCATCAGACTTTTTGTATTCAGCTCCAGTTAGTCAGAAGACCAGCCCAGGCCAGCTGCTGTTTCTGTGGGGAGCCCTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
3UTR TCA 90 bp GCATTACAGAAAGCATGGCACAGTGAGGCAGGAGTGGCTAGCAGATaGGAGAGCTCCCTTCTATATGCTGAGAACTGGAGGATAGGGCAT +
Preference number: 1 (lower is better)
Translates to: ALQKAWHSEAGVASR*ESSLLYAENWRIGH
Trigger: ATGCCCTATCCTCCAGTTCTCAGCATATAGAAGGGAGCTCTCTCATCTGCTAGCCACTCCTGCCTCACTGTGCCATGCTTTCTGTAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR GCA 90 bp ACTGAATCTAGGACATTCCAGTCACCTCCACCTCTGGAGCTGCTCTaGTTTGGAGAGAAAACCATGGTGTTTGCGGTCTGCACTGGATTC +
Preference number: 1 (lower is better)
Translates to: TESRTFQSPPPLELL*FGEKTMVFAVCTGF
Trigger: GAATCCAGTGCAGACCGCAAACACCATGGTTTTCTCTCCAAAGCAGAGCAGCTCCAGAGGTGGAGGTGACTGGAATGTCCTAGATTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR TCA 90 bp ACCAGAGCCTTCAATGATCTCACTCACCTTGCTTTCCCAGGTCGCTaGGAGTCCCACCATGTCTTGTATCCTTGTAATCCCAGCACTTTG +
Preference number: 1 (lower is better)
Translates to: TRAFNDLTHLAFPGR*ESHHVLYPCNPSTL
Trigger: CAAAGTGCTGGGATTACAAGGATACAAGACATGGTGGGACTCTCAGCGACCTGGGAAAGCAAGGTGAGTGAGATCATTGAAGGCTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555264.6
3UTR GCA 90 bp TCCACCTCTGGAGCTGCTCTGCTTTGGAGAGAAAACCATGGTGTTTaGGGTCTGCACTGGATTCAAATCCTGACTTTGCGATGTAACTGT +
Preference number: 1 (lower is better)
Translates to: STSGAALLWRENHGV*GLHWIQILTLRCNC
Trigger: ACAGTTACATCGCAAAGTCAGGATTTGAATCCAGTGCAGACCGCAAACACCATGGTTTTCTCTCCAAAGCAGAGCAGCTCCAGAGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR CCA 90 bp AAAGCTGGTGATCAGTTTGTACATATGGACAAGTTCAAGGCAGTATaGTCTACTTCTGGGAAGGCCTGGATTCCATTTGCTCCTGATGGA +
Preference number: 1 (lower is better)
Translates to: KAGDQFVHMDKFKAV*STSGKAWIPFAPDG
Trigger: TCCATCAGGAGCAAATGGAATCCAGGCCTTCCCAGAAGTAGACCATACTGCCTTGAACTTGTCCATATGTACAAACTGATCACCAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR CCA 90 bp ATACCAACTAATCTCCAAATAAAACCCAAACTCTGTACCTTAATCTaGATTGTTGTGCTCTGCAAACGAACGGGGACGAGGGCCGTTTGC +
Preference number: 1 (lower is better)
Translates to: IPTNLQIKPKLCTLI*IVVLCKRTGTRAVC
Trigger: GCAAACGGCCCTCGTCCCCGTTCGTTTGCAGAGCACAACAATCCAGATTAAGGTACAGAGTTTGGGTTTTATTTGGAGATTAGTTGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR GCA 90 bp CAAATAAAACCCAAACTCTGTACCTTAATCTGGATTGTTGTGCTCTaGAAACGAACGGGGACGAGGGCCGTTTGCCATGGAAATTTATCT +
Preference number: 1 (lower is better)
Translates to: QIKPKLCTLIWIVVL*KRTGTRAVCHGNLS
Trigger: AGATAAATTTCCATGGCAAACGGCCCTCGTCCCCGTTCGTTTGCAGAGCACAACAATCCAGATTAAGGTACAGAGTTTGGGTTTTATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR-3UTR GCA 90 bp TGCAAACGAACGGGGACGAGGGCCGTTTGCCATGGAAATTTATCTCCATCACCTGCTTACTCAGCTTACTaGAACCTCTGCCTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: CKRTGTRAVCHGNLSPSPAYSAY*NLCLPG
Trigger: GCCTGGGAGGCAGAGGTTGCAGTAAGCTGAGTAAGC...AGGTGATGGAGATAAATTTCCATGGCAAACGGCCCTCGTCCCCGTTCGTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR-3UTR TCA 90 bp AATGCTCCCTTTGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCAGCCCTGGGCTGGTCTTCTaGCTAACTGGAGCTGAATAC +
Preference number: 2 (lower is better)
Translates to: NAPFGNSQKIRAPHRNSSPGLVF*LTGAEY
Trigger: GTATTCAGCTCCAGTTAGTCAGAAGACCAGCCCAGG...GCTGCTGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGGAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
3UTR-3UTR TCA 90 bp GCAACCACCGTGACAATGAAATTGAAGATGGTGATGACCAGAGCCTTCAATGATGCAGGAGGATCACCTTaGGGCTGGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: ATTVTMKLKMVMTRAFNDAGGSP*GWEFKT
Trigger: GGTCTTGAACTCCCAGCCTCAAGGTGATCCTCCTGC...ATCATTGAAGGCTCTGGTCATCACCATCTTCAATTTCATTGTCACGGTGGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555264.6
3UTR-3UTR GCA 90 bp GAGAGCTCCCTTCTATATGCTGAGAACTGGAGGATAGGGCATTTGGTTCTCCCCCTTGGTCTCCCAAAGTaGTGGGATTACAGGCATGTA +
Preference number: 2 (lower is better)
Translates to: ESSLLYAENWRIGHLVLPLGLPK*WDYRHV
Trigger: TACATGCCTGTAATCCCAGCACTTTGGGAGACCAAG...GGGGAGAACCAAATGCCCTATCCTCCAGTTCTCAGCATATAGAAGGGAGCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR-3UTR TCA 90 bp AGATCTGGGATGGAGGCAGGTATAGCAGCATTGGGTTTTGGTATCACCATCACCAGGAGGAGCAGACCCTaGACAGTTAGAACTATGGAA +
Preference number: 2 (lower is better)
Translates to: RSGMEAGIAALGFGITITRRSRP*TVRTME
Trigger: TTCCATAGTTCTAACTGTTCAGGGTCTGCTCCTCCT...GGTGATGGTGATACCAAAACCCAATGCTGCTATACCTGCCTCCATCCCAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR-3UTR TCA 90 bp AATGCAGCTAGCACCCGCGAGGCCATTTCTGTGAAGATATATTGGCTTCCAAGGGACCAGAGCCTTCAATaGTCTCACTCACCTTGCTTT +
Preference number: 2 (lower is better)
Translates to: NAASTREAISVKIYWLPRDQSLQ*SHSPCF
Trigger: AAAGCAAGGTGAGTGAGATCATTGAAGGCTCTGGTC...CCTTGGAAGCCAATATATCTTCACAGAAATGGCCTCGCGGGTGCTAGCTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555264.6
3UTR-3UTR TCA 90 bp GGCCATTTCTGTGAAGATATATTGGCTTCCAAGGTAAGTGCAGACGAAGGCAGCGACCAGAGCCTTCAATaGTCTCACTTGCTTTCCCAG +
Preference number: 2 (lower is better)
Translates to: GHFCEDILASKVSADEGSDQSLQ*SHLLSQ
Trigger: CTGGGAAAGCAAGTGAGATCATTGAAGGCTCTGGTC...GCTGCCTTCGTCTGCACTTACCTTGGAAGCCAATATATCTTCACAGAAATGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580868.5
3UTR-3UTR GCA 90 bp GAGAGCTCCCTTCTATATGCTGAGAACTGGAGGATAGGGCATTTGGTTCTCCCCTTGCAAAAAGGTAGCTaGCTTGCTTCCAGTTCTACC +
Preference number: 2 (lower is better)
Translates to: ESSLLYAENWRIGHLVLPLQKGS*LASSST
Trigger: GGTAGAACTGGAAGCAAGGCAGCTACCTTTTTGCAA...GGGGAGAACCAAATGCCCTATCCTCCAGTTCTCAGCATATAGAAGGGAGCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR-3UTR GCA 90 bp AGATCTGGGATGGAGGCAGGTATAGCAGCATTGGGTTTTGGTATCACCATCACCCTCAGCCTCCCAAAATaGTACGATTACAGGTGTGAG +
Preference number: 2 (lower is better)
Translates to: RSGMEAGIAALGFGITITLSLPK*YDYRCE
Trigger: CTCACACCTGTAATCGTAGCATTTTGGGAGGCTGAG...GGTGATGGTGATACCAAAACCCAATGCTGCTATACCTGCCTCCATCCCAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR-3UTR CCA 90 bp CCATCTTTCTCTTATTTGATGTCTCTGATCAGCTCCTCTTCCAGCACAAACTGGTCGGTGACTGCCAATTaGAGCCTGAAGCCCCCAAAG +
Preference number: 2 (lower is better)
Translates to: PSFSYLMSLISSSSSTNWSVTAN*SLKPPK
Trigger: CTTTGGGGGCTTCAGGCTCCAATTGGCAGTCACCGA...CCAGTTTGTGCTGGAAGAGGAGCTGATCAGAGACATCAAATAAGAGAAAGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR-3UTR CCA 90 bp TGCAAACGAACGGGGACGAGGGCCGTTTGCCATGGAAATTTATCTCCATCACCTAGTATGGTCTACTTCTaGGAAGGCCTGGATTCCATT +
Preference number: 2 (lower is better)
Translates to: CKRTGTRAVCHGNLSPSPSMVYF*EGLDSI
Trigger: AATGGAATCCAGGCCTTCCCAGAAGTAGACCATACT...AGGTGATGGAGATAAATTTCCATGGCAAACGGCCCTCGTCCCCGTTCGTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR-3UTR GCA 90 bp CATTTCTGTGAAGATATATTGGCTTCCAAGGTAAGTGCAGACGAAGGCAGCAACTTCAATGATCTCACTTaGTTTCCCAGGTCGCTGAGA +
Preference number: 2 (lower is better)
Translates to: HFCEDILASKVSADEGSNFNDLT*FPRSLR
Trigger: TCTCAGCGACCTGGGAAAGCAAGTGAGATCATTGAA...GTTGCTGCCTTCGTCTGCACTTACCTTGGAAGCCAATATATCTTCACAGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580868.5
3UTR-3UTR CCA 90 bp GAAATCGCTATGCTTTGTGTTGTCACAGGAGTTAAAATAGGAATACCCTGCATAAAACAGCAGCTGGCCTaGGCTGGTCTTCTGACTAAC +
Preference number: 2 (lower is better)
Translates to: EIAMLCVVTGVKIGIPCIKQQLA*AGLLTN
Trigger: GTTAGTCAGAAGACCAGCCCAGGCCAGCTGCTGTTT...TATGCAGGGTATTCCTATTTTAACTCCTGTGACAACACAAAGCATAGCGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR CAA 90 bp TTCTGTTTTAAAGATGTGTTATCTCAATCTCCTCCAATGCTCCCTTaGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCAGCT +
Preference number: 2 (lower is better)
Translates to: FCFKDVLSQSPPMLP*EIHRRLGLPTETAA
Trigger: AGCTGCTGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGGAGGAGATTGAGATAACACATCTTTAAAACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR-3UTR CCA 90 bp CTCTTATTTGATGTCTCTGATCAGCTCCTCTTCCAGCACAAACTGGAGAAAGGGTCCTTTCTGTTTTCTTaGAGGCTTCTGAACTCAATT +
Preference number: 2 (lower is better)
Translates to: LLFDVSDQLLFQHKLEKGSFLFS*RLLNSI
Trigger: AATTGAGTTCAGAAGCCTCCAAGAAAACAGAAAGGA...CCCTTTCTCCAGTTTGTGCTGGAAGAGGAGCTGATCAGAGACATCAAATAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR-3UTR CCA 90 bp GAAATCGCTATGCTTTGTGTTGTCACAGGAGTTAAAATAGGAATACCCTGCATATCTTCCAGCACAAACTaGAGAAAGGGGATCCTTTCT +
Preference number: 2 (lower is better)
Translates to: EIAMLCVVTGVKIGIPCISSSTN*RKGILS
Trigger: AGAAAGGATCCCCTTTCTCCAGTTTGTGCTGGAAGA...TATGCAGGGTATTCCTATTTTAACTCCTGTGACAACACAAAGCATAGCGATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR-3UTR CCA 90 bp CCATCTTTCTCTTATTTGATGTCTCTGATCAGCTCCTCTTCCAGCACAAACTGGATCAGTTTGTACATATaGACAAGTTCAAGGCAGTAT +
Preference number: 2 (lower is better)
Translates to: PSFSYLMSLISSSSSTNWISLYI*TSSRQY
Trigger: ATACTGCCTTGAACTTGTCCATATGTACAAACTGAT...CCAGTTTGTGCTGGAAGAGGAGCTGATCAGAGACATCAAATAAGAGAAAGATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR-3UTR CAA 90 bp AGCTCGGCCAGACCCACCACAGAGGCGACGATCAATGCAGCTAGCACCCGCGAGACCGTGACAATGAAATaGAAGATGGTGATGACCAGA +
Preference number: 3 (lower is better)
Translates to: SSARPTTEATINAASTRETVTMK*KMVMTR
Trigger: TCTGGTCATCACCATCTTCAATTTCATTGTCACGGT...CTCGCGGGTGCTAGCTGCATTGATCGTCGCCTCTGTGGTGGGTCTGGCCGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580868.5
3UTR GCA 72 bp AGGACATTCCAGTCACCTCCACCTCTGGAGCTGCTCTaGTTTGGAGAGAAAACCATGGTGTTTGCGGTCTGC +
Preference number: 3 (lower is better)
Translates to: RTFQSPPPLELL*FGEKTMVFAVC
Trigger: GCAGACCGCAAACACCATGGTTTTCTCTCCAAAGCAGAGCAGCTCCAGAGGTGGAGGTGACTGGAATGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR TCA 72 bp CCCCACAGAAACAGCAGCTGGCCTGGGCTGGTCTTCTaGCTAACTGGAGCTGAATACAAAAAGTCTGATGGG +
Preference number: 3 (lower is better)
Translates to: PHRNSSWPGLVF*LTGAEYKKSDG
Trigger: CCCATCAGACTTTTTGTATTCAGCTCCAGTTAGTCAGAAGACCAGCCCAGGCCAGCTGCTGTTTCTGTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
3UTR TCA 72 bp AAAGCATGGCACAGTGAGGCAGGAGTGGCTAGCAGATaGGAGAGCTCCCTTCTATATGCTGAGAACTGGAGG +
Preference number: 3 (lower is better)
Translates to: KAWHSEAGVASR*ESSLLYAENWR
Trigger: CCTCCAGTTCTCAGCATATAGAAGGGAGCTCTCTCATCTGCTAGCCACTCCTGCCTCACTGTGCCATGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR CCA 72 bp AACGCTAGTTCCCTCTCCAGACAGGCCCTAAGAAACTaGGAAGGCCCTAAACTTCTTGTTCTTCCCACCTCC +
Preference number: 3 (lower is better)
Translates to: NASSLSRQALRN*EGPKLLVLPTS
Trigger: GGAGGTGGGAAGAACAAGAAGTTTAGGGCCTTCCCAGTTTCTTAGGGCCTGTCTGGAGAGGGAACTAGCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR GCA 72 bp AATCTAGGACATTCCAGTCACCTCCACCTCTGGAGCTaGTCTGCTTTGGAGAGAAAACCATGGTGTTTGCGG +
Preference number: 3 (lower is better)
Translates to: NLGHSSHLHLWS*SALERKPWCLR
Trigger: CCGCAAACACCATGGTTTTCTCTCCAAAGCAGAGCAGCTCCAGAGGTGGAGGTGACTGGAATGTCCTAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR CCA 72 bp CACCTCTGGAGCTGCTCTGCTTTGGAGAGAAAACCATaGTGTTTGCGGTCTGCACTGGATTCAAATCCTGAC +
Preference number: 3 (lower is better)
Translates to: HLWSCSALERKP*CLRSALDSNPD
Trigger: GTCAGGATTTGAATCCAGTGCAGACCGCAAACACCATGGTTTTCTCTCCAAAGCAGAGCAGCTCCAGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR CCA 72 bp CTAAATAGGGCCAGGTTCCACACAGATACCTCTTGGTaGGAGGTATTACCCAGGCTTCAGCTGGGATTAGAG +
Preference number: 3 (lower is better)
Translates to: LNRARFHTDTSW*EVLPRLQLGLE
Trigger: CTCTAATCCCAGCTGAAGCCTGGGTAATACCTCCCACCAAGAGGTATCTGTGTGGAACCTGGCCCTATTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR CCA 72 bp TCCCTAAATAGGGCCAGGTTCCACACAGATACCTCTTaGTGGGAGGTATTACCCAGGCTTCAGCTGGGATTA +
Preference number: 3 (lower is better)
Translates to: SLNRARFHTDTS*WEVLPRLQLGL
Trigger: TAATCCCAGCTGAAGCCTGGGTAATACCTCCCACCAAGAGGTATCTGTGTGGAACCTGGCCCTATTTAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR-3UTR CAA 90 bp GCAACCACCGTGACAATGAAATTGAAGATGGTGATGACCAGAGCCTTCAATGATGGCAGGAGGATCACCTaGAGGCTGGGAGTTCAAGAC +
Preference number: 3 (lower is better)
Translates to: ATTVTMKLKMVMTRAFNDGRRIT*RLGVQD
Trigger: GTCTTGAACTCCCAGCCTCAAGGTGATCCTCCTGCC...ATCATTGAAGGCTCTGGTCATCACCATCTTCAATTTCATTGTCACGGTGGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555264.6
3UTR TCA 72 bp CGATCAATGCAGCTAGCACCCGCGAGGCCATTTCTGTaGAGATATATTGGCTTCCAAGGTAAGTGCAGACGA +
Preference number: 3 (lower is better)
Translates to: RSMQLAPARPFL*RYIGFQGKCRR
Trigger: TCGTCTGCACTTACCTTGGAAGCCAATATATCTTCACAGAAATGGCCTCGCGGGTGCTAGCTGCATTGATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580868.5
3UTR TCA 72 bp ACCATGGTGTTTGCGGTCTGCACTGGATTCAAATCCTaGCTTTGCGATGTAACTGTGGCAACTCTGGAACTC +
Preference number: 3 (lower is better)
Translates to: TMVFAVCTGFKS*LCDVTVATLEL
Trigger: GAGTTCCAGAGTTGCCACAGTTACATCGCAAAGTCAGGATTTGAATCCAGTGCAGACCGCAAACACCATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR TCA 72 bp TTCAATGATCTCACTCACCTTGCTTTCCCAGGTCGCTaGGAGTCCCACCATGTCTTGTATCCTTGTAATCCC +
Preference number: 3 (lower is better)
Translates to: FNDLTHLAFPGR*ESHHVLYPCNP
Trigger: GGGATTACAAGGATACAAGACATGGTGGGACTCTCAGCGACCTGGGAAAGCAAGGTGAGTGAGATCATTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555264.6
3UTR-3UTR CAA 90 bp ACCACCGTGACAATGAAATTGAAGATGGTGATGACCAGAGCCTTCAATGATCTCGAGTCCCACCATGTCTaGTATCCTTGTAATCCCAGC +
Preference number: 3 (lower is better)
Translates to: TTVTMKLKMVMTRAFNDLESHHV*YPCNPS
Trigger: GCTGGGATTACAAGGATACAAGACATGGTGGGACTC...GAGATCATTGAAGGCTCTGGTCATCACCATCTTCAATTTCATTGTCACGGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555264.6
3UTR CCA 72 bp AAGTTCAAGGCAGTATGGTCTACTTCTGGGAAGGCCTaGATTCCATTTGCTCCTGATGGAAAAACCCTAGTC +
Preference number: 3 (lower is better)
Translates to: KFKAVWSTSGKA*IPFAPDGKTLV
Trigger: GACTAGGGTTTTTCCATCAGGAGCAAATGGAATCCAGGCCTTCCCAGAAGTAGACCATACTGCCTTGAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR CCA 72 bp CTTTGGAGAGAAAACCATGGTGTTTGCGGTCTGCACTaGATTCAAATCCTGACTTTGCGATGTAACTGTGGC +
Preference number: 3 (lower is better)
Translates to: LWRENHGVCGLH*IQILTLRCNCG
Trigger: GCCACAGTTACATCGCAAAGTCAGGATTTGAATCCAGTGCAGACCGCAAACACCATGGTTTTCTCTCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR-3UTR CAA 90 bp GTGTTATCTCAATCTCCTCCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGAAAAAGTCTGATGGGTaGACTGAGTCGGTGACTGCC +
Preference number: 3 (lower is better)
Translates to: VLSQSPPMLPLEIHRRLGKKSDG*TESVTA
Trigger: GGCAGTCACCGACTCAGTCAACCCATCAGACTTTTT...CCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGGAGGAGATTGAGATAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
3UTR CCA 72 bp GTACCAGGAGGAGCAGACCCTGAACAGTTAGAACTATaGAAATCGCTATGCTTTGTGTTGTCACAGGAGTTA +
Preference number: 3 (lower is better)
Translates to: VPGGADPEQLEL*KSLCFVLSQEL
Trigger: TAACTCCTGTGACAACACAAAGCATAGCGATTTCCATAGTTCTAACTGTTCAGGGTCTGCTCCTCCTGGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR TCA 72 bp GTGAACCAAAAAGAGTGTACCAGGAGGAGCAGACCCTaGACAGTTAGAACTATGGAAATCGCTATGCTTTGT +
Preference number: 3 (lower is better)
Translates to: VNQKECTRRSRP*TVRTMEIAMLC
Trigger: ACAAAGCATAGCGATTTCCATAGTTCTAACTGTTCAGGGTCTGCTCCTCCTGGTACACTCTTTTTGGTTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp CCAGACCCACCACAGAGGCGACGATCAATGCAGCTAGCACCCGCGAGGCCATTTTCTGGGTTCCCGGACTaGAGACTGGGGCTCACCCCT +
Preference number: 4 (lower is better)
Translates to: PDPPQRRRSMQLAPARPFSGFPD*RLGLTP
Trigger: AGGGGTGAGCCCCAGTCTCCAGTCCGGGAACCCAGA...AAATGGCCTCGCGGGTGCTAGCTGCATTGATCGTCGCCTCTGTGGTGGGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580868.5
CDS-3UTR GCA 90 bp CCCCAGCTCCTGGTCCCACTGAATCTAGGACATTCCAGTCACCTCCACCTCTGGCAGCTCGCCTTCCATTaGCCGCACCATGACATACAG +
Preference number: 4 (lower is better)
Translates to: PQLLVPLNLGHSSHLHLWQLAFH*PHHDIQ
Trigger: CTGTATGTCATGGTGCGGGCAATGGAAGGCGAGCTG...CCAGAGGTGGAGGTGACTGGAATGTCCTAGATTCAGTGGGACCAGGAGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR GCA 90 bp TTGCTTTCCCAGGTCGCTGAGAGTCCCACCATGTCTTGTATCCTGACAAGTGACCTATCACCGCCCTTGTaGTTCTTCCCCAGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: LLSQVAESPTMSCILTSDLSPPL*FFPSAA
Trigger: GGCCGCGCTGGGGAAGAAGCACAAGGGCGGTGATAG...GTCACTTGTCAGGATACAAGACATGGTGGGACTCTCAGCGACCTGGGAAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580868.5
CDS-3UTR TCA 90 bp TGCAAACGAACGGGGACGAGGGCCGTTTGCCATGGAAATTTATCTCCATCACCTAAGACCCTGGGGAGATaGGAGCCTCTGCTAGCACCC +
Preference number: 4 (lower is better)
Translates to: CKRTGTRAVCHGNLSPSPKTLGR*EPLLAP
Trigger: GGGTGCTAGCAGAGGCTCTCATCTCCCCAGGGTCTT...AGGTGATGGAGATAAATTTCCATGGCAAACGGCCCTCGTCCCCGTTCGTTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp TTGACTGAGTCGGTGACTGCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAAGCGTTGGGGGCCACTaGAGCTATCACCGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: LTESVTANWSLKPPKSSLSVGGH*SYHRPC
Trigger: ACAAGGGCGGTGATAGCTCCAGTGGCCCCCAACGCT...TAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGCAGTCACCGACTCAGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR TCA 90 bp AATGCAGCTAGCACCCGCGAGGCCATTTCTGTGAAGATATATTGGCTTCCAAGGCCATTGCCCGCACCATaGCATACAGCTCGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: NAASTREAISVKIYWLPRPLPAP*HTARPD
Trigger: GTCTGGCCGAGCTGTATGTCATGGTGCGGGCAATGG...CCTTGGAAGCCAATATATCTTCACAGAAATGGCCTCGCGGGTGCTAGCTGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580868.5
CDS-3UTR GCA 90 bp GGCAGCAACCACCGTGACAATGAAATTGAAGATGGTGATGACCAGAGCCTTCAACTATCACCGCCCTTGTaGTTCTTCCCCAGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: GSNHRDNEIEDGDDQSLQLSPPL*FFPSAA
Trigger: GGCCGCGCTGGGGAAGAAGCACAAGGGCGGTGATAG...TTGAAGGCTCTGGTCATCACCATCTTCAATTTCATTGTCACGGTGGTTGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555264.6
ENST00000580868.5
CDS-3UTR GCA 90 bp CCAGACCCACCACAGAGGCGACGATCAATGCAGCTAGCACCCGCGAGGCCATTTTTCAATGATCTCACTTaGTTTCCCAGGTCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PDPPQRRRSMQLAPARPFFNDLT*FPRSLR
Trigger: TCTCAGCGACCTGGGAAAGCAAGTGAGATCATTGAA...AAATGGCCTCGCGGGTGCTAGCTGCATTGATCGTCGCCTCTGTGGTGGGTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580868.5
CDS-3UTR GCA 90 bp GAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCAGCTGGCCTGGGCTGGTGGATTGTTGTGCTCTaGAAACGAACGGGGACGAGG +
Preference number: 4 (lower is better)
Translates to: EIHRRLGLPTETAAGLGWWIVVL*KRTGTR
Trigger: CCTCGTCCCCGTTCGTTTGCAGAGCACAACAATCCA...CCAGCCCAGGCCAGCTGCTGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR TCA 90 bp TACAAAAAGTCTGATGGGTTGACTGAGTCGGTGACTGCCAATTGGAGCCTGAAGCCATTGCCCGCACCATaGCATACAGCTCGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: YKKSDGLTESVTANWSLKPLPAP*HTARPD
Trigger: GTCTGGCCGAGCTGTATGTCATGGTGCGGGCAATGG...CTTCAGGCTCCAATTGGCAGTCACCGACTCAGTCAACCCATCAGACTTTTTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR TCA 90 bp GACTGCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAGACTTGATGATGAACCATTGCCCGCACCATaGCATACAGCTCGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: DCQLEPEAPKVFSRLDDEPLPAP*HTARPD
Trigger: GTCTGGCCGAGCTGTATGTCATGGTGCGGGCAATGG...TTCATCATCAAGTCTAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR GCA 90 bp GAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCAGCTGGCCTGGGCTGGGGGACGAGGGCCGTTTaGCATGGAAATTTATCTCCA +
Preference number: 4 (lower is better)
Translates to: EIHRRLGLPTETAAGLGWGTRAV*HGNLSP
Trigger: TGGAGATAAATTTCCATGGCAAACGGCCCTCGTCCC...CCAGCCCAGGCCAGCTGCTGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp ATATTGGCTTCCAAGGTAAGTGCAGACGAAGGCAGCAACCACCGTGACAATGAAAGCGTTGGGGGCCACTaGAGCTATCACCGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: ILASKVSADEGSNHRDNESVGGH*SYHRPC
Trigger: ACAAGGGCGGTGATAGCTCCAGTGGCCCCCAACGCT...TTCATTGTCACGGTGGTTGCTGCCTTCGTCTGCACTTACCTTGGAAGCCAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555264.6
ENST00000580868.5
CDS-3UTR CCA 90 bp TGCAAACGAACGGGGACGAGGGCCGTTTGCCATGGAAATTTATCTCCATCACCTCTGCCAAGCAGTCCCTaGACCCAGAGTGCATTACAG +
Preference number: 4 (lower is better)
Translates to: CKRTGTRAVCHGNLSPSPLPSSP*TQSALQ
Trigger: CTGTAATGCACTCTGGGTCCAGGGACTGCTTGGCAG...AGGTGATGGAGATAAATTTCCATGGCAAACGGCCCTCGTCCCCGTTCGTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR TCA 90 bp GTCGGTGACTGCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAGACTTGATCCATGTCTTGTATCCTaGCAAGTGACGTTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: VGDCQLEPEAPKVFSRLDPCLVS*QVTLRV
Trigger: CACCCGCAACGTCACTTGTCAGGATACAAGACATGG...ATCAAGTCTAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGCAGTCACCGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR TCA 90 bp CAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAGACTTGATGATGAAGCACCAGCTTTCCCAGGTCGCTaGGAGTCCCACCATGTCTTG +
Preference number: 4 (lower is better)
Translates to: QLEPEAPKVFSRLDDEAPAFPGR*ESHHVL
Trigger: CAAGACATGGTGGGACTCTCAGCGACCTGGGAAAGC...TGGTGCTTCATCATCAAGTCTAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR TCA 90 bp GGCCATTTCTGTGAAGATATATTGGCTTCCAAGGTAAGTGCAGACGAAGGCAGCGCTTTCCCAGGTCGCTaGGAGTCCCACCATGTCTTG +
Preference number: 4 (lower is better)
Translates to: GHFCEDILASKVSADEGSAFPGR*ESHHVL
Trigger: CAAGACATGGTGGGACTCTCAGCGACCTGGGAAAGC...GCTGCCTTCGTCTGCACTTACCTTGGAAGCCAATATATCTTCACAGAAATGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555264.6
ENST00000580868.5
CDS-3UTR TCA 90 bp TTGACTGAGTCGGTGACTGCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTACCTGGGCTGGTCTTCTaGCTAACTGGAGCTGAATAC +
Preference number: 4 (lower is better)
Translates to: LTESVTANWSLKPPKSSLPGLVF*LTGAEY
Trigger: GTATTCAGCTCCAGTTAGTCAGAAGACCAGCCCAGG...TAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGCAGTCACCGACTCAGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR TCA 90 bp TTGACTGAGTCGGTGACTGCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAAAGGGTTTAGGACTCTaGCTGACAAGACCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LTESVTANWSLKPPKSSLKGLGL*LTRPWG
Trigger: TCCCCAGGGTCTTGTCAGTCAGAGTCCTAAACCCTT...TAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGCAGTCACCGACTCAGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR TCA 90 bp CAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAGACTTGATGATGAAGCACCAGCTGTGGAGACAACCTaGCAGATCTGGGATGGAGGC +
Preference number: 4 (lower is better)
Translates to: QLEPEAPKVFSRLDDEAPAVETT*QIWDGG
Trigger: GCCTCCATCCCAGATCTGTCAGGTTGTCTCCACAGC...TGGTGCTTCATCATCAAGTCTAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR TCA 90 bp GATATATTGGCTTCCAAGGTAAGTGCAGACGAAGGCAGCAACCACCGTGACAATGCAGGAGGATCACCTTaGGGCTGGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: DILASKVSADEGSNHRDNAGGSP*GWEFKT
Trigger: GGTCTTGAACTCCCAGCCTCAAGGTGATCCTCCTGC...ATTGTCACGGTGGTTGCTGCCTTCGTCTGCACTTACCTTGGAAGCCAATATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555264.6
CDS-3UTR CCA 90 bp TTGACTGAGTCGGTGACTGCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAAAACAGCAGCTGGCCTaGGCTGGTCTTCTGACTAAC +
Preference number: 4 (lower is better)
Translates to: LTESVTANWSLKPPKSSLKQQLA*AGLLTN
Trigger: GTTAGTCAGAAGACCAGCCCAGGCCAGCTGCTGTTT...TAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGCAGTCACCGACTCAGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR CCA 90 bp GGAGCTGAATACAAAAAGTCTGATGGGTTGACTGAGTCGGTGACTGCCAATTGGGGATGCCCTCTGATGTaGGGCTGTGGAGACAACCTG +
Preference number: 4 (lower is better)
Translates to: GAEYKKSDGLTESVTANWGCPLM*GCGDNL
Trigger: CAGGTTGTCTCCACAGCCCCACATCAGAGGGCATCC...CCAATTGGCAGTCACCGACTCAGTCAACCCATCAGACTTTTTGTATTCAGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR TCA 90 bp ATATTGGCTTCCAAGGTAAGTGCAGACGAAGGCAGCAACCACCGTGACAATGAAGGTGCAGATCCCGGATaGGACGGAAAGAAACCAAGC +
Preference number: 4 (lower is better)
Translates to: ILASKVSADEGSNHRDNEGADPG*DGKKPS
Trigger: GCTTGGTTTCTTTCCGTCTCATCCGGGATCTGCACC...TTCATTGTCACGGTGGTTGCTGCCTTCGTCTGCACTTACCTTGGAAGCCAATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555264.6
ENST00000580868.5
CDS-3UTR TCA 90 bp GGAGCTGAATACAAAAAGTCTGATGGGTTGACTGAGTCGGTGACTGCCAATTGGAGGTGTGCCTGGAAGTaGAGAGGGGGCTCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: GAEYKKSDGLTESVTANWRCAWK*RGGSQK
Trigger: CTTTTGAGAGCCCCCTCTTCACTTCCAGGCACACCT...CCAATTGGCAGTCACCGACTCAGTCAACCCATCAGACTTTTTGTATTCAGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395404.7
CDS-3UTR GCA 90 bp GTGTTATCTCAATCTCCTCCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGCTATCACCGCCCTTGTaGTTCTTCCCCAGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: VLSQSPPMLPLEIHRRLGLSPPL*FFPSAA
Trigger: GGCCGCGCTGGGGAAGAAGCACAAGGGCGGTGATAG...CCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGGAGGAGATTGAGATAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR GCA 90 bp AATGCTCCCTTTGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCAGCCAGCTCGCCTTCCATTaGCCGCACCATGACATACAG +
Preference number: 4 (lower is better)
Translates to: NAPFGNSQKIRAPHRNSSQLAFH*PHHDIQ
Trigger: CTGTATGTCATGGTGCGGGCAATGGAAGGCGAGCTG...GCTGCTGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGGAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR GCA 90 bp CCTCCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCTTACTCAGCTTACTaGAACCTCTGCCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PPMLPLEIHRRLGLPTETAYSAY*NLCLPG
Trigger: GCCTGGGAGGCAGAGGTTGCAGTAAGCTGAGTAAGC...TGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp TACAAAAAGTCTGATGGGTTGACTGAGTCGGTGACTGCCAATTGGAGCCTGAAGTCGGTGACTGCCAATTaGAGCCTGAAGCCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: YKKSDGLTESVTANWSLKSVTAN*SLKPPK
Trigger: CTTTGGGGGCTTCAGGCTCCAATTGGCAGTCACCGA...CTTCAGGCTCCAATTGGCAGTCACCGACTCAGTCAACCCATCAGACTTTTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR CCA 90 bp TACAAAAAGTCTGATGGGTTGACTGAGTCGGTGACTGCCAATTGGAGCCTGAAGAGTCACCTCCACCTCTaGAGCTGCTCTGCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: YKKSDGLTESVTANWSLKSHLHL*SCSALE
Trigger: CTCCAAAGCAGAGCAGCTCCAGAGGTGGAGGTGACT...CTTCAGGCTCCAATTGGCAGTCACCGACTCAGTCAACCCATCAGACTTTTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp TTGACTGAGTCGGTGACTGCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTACACACAGATACCTCTTaGTGGGAGGTATTACCCAGG +
Preference number: 4 (lower is better)
Translates to: LTESVTANWSLKPPKSSLHTDTS*WEVLPR
Trigger: CCTGGGTAATACCTCCCACCAAGAGGTATCTGTGTG...TAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGCAGTCACCGACTCAGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR TCA 90 bp CTCTTATTTGATGTCTCTGATCAGCTCCTCTTCCAGCACAAACTGGAGAAAGGGGGTGCAGATCCCGGATaGGACGGAAAGAAACCAAGC +
Preference number: 4 (lower is better)
Translates to: LLFDVSDQLLFQHKLEKGGADPG*DGKKPS
Trigger: GCTTGGTTTCTTTCCGTCTCATCCGGGATCTGCACC...CCCTTTCTCCAGTTTGTGCTGGAAGAGGAGCTGATCAGAGACATCAAATAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR TCA 90 bp CAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAGACTTGATGATGAAGCACCACCATGTCTTGTATCCTaGCAAGTGACGTTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: QLEPEAPKVFSRLDDEAPPCLVS*QVTLRV
Trigger: CACCCGCAACGTCACTTGTCAGGATACAAGACATGG...TGGTGCTTCATCATCAAGTCTAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR TCA 90 bp ACCACCGTGACAATGAAATTGAAGATGGTGATGACCAGAGCCTTCAATGATCTCGCTTTCCCAGGTCGCTaGGAGTCCCACCATGTCTTG +
Preference number: 4 (lower is better)
Translates to: TTVTMKLKMVMTRAFNDLAFPGR*ESHHVL
Trigger: CAAGACATGGTGGGACTCTCAGCGACCTGGGAAAGC...GAGATCATTGAAGGCTCTGGTCATCACCATCTTCAATTTCATTGTCACGGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555264.6
ENST00000580868.5
CDS-3UTR TCA 90 bp CTAACTGGAGCTGAATACAAAAAGTCTGATGGGTTGACTGAGTCGGTGACTGCCCCTGGGCTGGTCTTCTaGCTAACTGGAGCTGAATAC +
Preference number: 4 (lower is better)
Translates to: LTGAEYKKSDGLTESVTAPGLVF*LTGAEY
Trigger: GTATTCAGCTCCAGTTAGTCAGAAGACCAGCCCAGG...GGCAGTCACCGACTCAGTCAACCCATCAGACTTTTTGTATTCAGCTCCAGTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR TCA 90 bp GACTGCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAGACTTGATGATGAACTGGTCTCAAACTCCTaGACTCAAGCATCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: DCQLEPEAPKVFSRLDDELVSNS*TQASSH
Trigger: GTGGGAGGATGCTTGAGTTCAGGAGTTTGAGACCAG...TTCATCATCAAGTCTAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR TCA 90 bp CTAACTGGAGCTGAATACAAAAAGTCTGATGGGTTGACTGAGTCGGTGACTGCCAGACTTTCTCAAGGGTaGATTGGGCCTAGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: LTGAEYKKSDGLTESVTARLSQG*IGPRCA
Trigger: GGCACACCTAGGCCCAATTCACCCTTGAGAAAGTCT...GGCAGTCACCGACTCAGTCAACCCATCAGACTTTTTGTATTCAGCTCCAGTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395404.7
CDS-3UTR GCA 90 bp GACTGCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAGACTTGATGATGAAGGCTTCCAAGGTAAGTaGAGACGAAGGCAGCAACCA +
Preference number: 4 (lower is better)
Translates to: DCQLEPEAPKVFSRLDDEGFQGK*RRRQQP
Trigger: TGGTTGCTGCCTTCGTCTGCACTTACCTTGGAAGCC...TTCATCATCAAGTCTAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR GCA 90 bp CCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCAGGCTTCCAAGGTAAGTaGAGACGAAGGCAGCAACCA +
Preference number: 4 (lower is better)
Translates to: PMLPLEIHRRLGLPTETAGFQGK*RRRQQP
Trigger: TGGTTGCTGCCTTCGTCTGCACTTACCTTGGAAGCC...TGCTGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR GCA 90 bp GGCAGCAACCACCGTGACAATGAAATTGAAGATGGTGATGACCAGAGCCTTCAAGGCTTCCAAGGTAAGTaGAGACGAAGGCAGCAACCA +
Preference number: 4 (lower is better)
Translates to: GSNHRDNEIEDGDDQSLQGFQGK*RRRQQP
Trigger: TGGTTGCTGCCTTCGTCTGCACTTACCTTGGAAGCC...TTGAAGGCTCTGGTCATCACCATCTTCAATTTCATTGTCACGGTGGTTGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555264.6
ENST00000580868.5
CDS-3UTR CCA 90 bp ATGTCTTGTATCCTGACAAGTGACGTTGCGGGTGATCCGTTTATATTCCTCATTAGCGTTGGGGGCCACTaGAGCTATCACCGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: MSCILTSDVAGDPFIFLISVGGH*SYHRPC
Trigger: ACAAGGGCGGTGATAGCTCCAGTGGCCCCCAACGCT...AATGAGGAATATAAACGGATCACCCGCAACGTCACTTGTCAGGATACAAGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580868.5
CDS-3UTR CCA 90 bp GCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAGACTTGATGATGAAGCACAAAGAAACCAAGCGTTaGGGGCCACTGGAGCTATCA +
Preference number: 4 (lower is better)
Translates to: ANWSLKPPKSSLDLMMKHKETKR*GPLELS
Trigger: TGATAGCTCCAGTGGCCCCCAACGCTTGGTTTCTTT...GTGCTTCATCATCAAGTCTAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp AGATCTGGGATGGAGGCAGGTATAGCAGCATTGGGTTTTGGTATCACCATCACCCTTTCTCTCAGATGCTaGTGCAGATCCCGGATGAGA +
Preference number: 4 (lower is better)
Translates to: RSGMEAGIAALGFGITITLSLRC*CRSRMR
Trigger: TCTCATCCGGGATCTGCACCAGCATCTGAGAGAAAG...GGTGATGGTGATACCAAAACCCAATGCTGCTATACCTGCCTCCATCCCAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp TTGATGTCTCTGATCAGCTCCTCTTCCAGCACAAACTGGAGAAAGGGGATCCTTAAACAGCAGCTGGCCTaGGCTGGTCTTCTGACTAAC +
Preference number: 4 (lower is better)
Translates to: LMSLISSSSSTNWRKGILKQQLA*AGLLTN
Trigger: GTTAGTCAGAAGACCAGCCCAGGCCAGCTGCTGTTT...AAGGATCCCCTTTCTCCAGTTTGTGCTGGAAGAGGAGCTGATCAGAGACATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp CCCTTTGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCAGCTGGCCTGGAGCTGCTCTGCTTTaGAGAGAAAACCATGGTGTT +
Preference number: 4 (lower is better)
Translates to: PFGNSQKIRAPHRNSSWPGAALL*RENHGV
Trigger: AACACCATGGTTTTCTCTCCAAAGCAGAGCAGCTCC...AGGCCAGCTGCTGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp GGCAGCAACCACCGTGACAATGAAATTGAAGATGGTGATGACCAGAGCCTTCAAAGTTCAAGACCAGCCTaGCCAACGTGGTCTCTACTG +
Preference number: 4 (lower is better)
Translates to: GSNHRDNEIEDGDDQSLQSSRPA*PTWSLL
Trigger: CAGTAGAGACCACGTTGGCCAGGCTGGTCTTGAACT...TTGAAGGCTCTGGTCATCACCATCTTCAATTTCATTGTCACGGTGGTTGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555264.6
CDS-3UTR TCA 90 bp ACCACCGTGACAATGAAATTGAAGATGGTGATGACCAGAGCCTTCAATGATCTCGGTGCAGATCCCGGATaGGACGGAAAGAAACCAAGC +
Preference number: 4 (lower is better)
Translates to: TTVTMKLKMVMTRAFNDLGADPG*DGKKPS
Trigger: GCTTGGTTTCTTTCCGTCTCATCCGGGATCTGCACC...GAGATCATTGAAGGCTCTGGTCATCACCATCTTCAATTTCATTGTCACGGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555264.6
ENST00000580868.5
CDS-3UTR TCA 90 bp TTGATGTCTCTGATCAGCTCCTCTTCCAGCACAAACTGGAGAAAGGGGATCCTTGACCAGAGCCTTCAATaGTCTCACTTGCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LMSLISSSSSTNWRKGILDQSLQ*SHLLSQ
Trigger: CTGGGAAAGCAAGTGAGATCATTGAAGGCTCTGGTC...AAGGATCCCCTTTCTCCAGTTTGTGCTGGAAGAGGAGCTGATCAGAGACATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR TCA 90 bp CCTCCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGACCAGAGCCTTCAATaGTCTCACTTGCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PPMLPLEIHRRLGLPTETDQSLQ*SHLLSQ
Trigger: CTGGGAAAGCAAGTGAGATCATTGAAGGCTCTGGTC...TGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR TCA 90 bp GACTGCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAGACTTGATGATGAACTCCCTTCTATATGCTaGGAACTGGAGGATAGGGCA +
Preference number: 4 (lower is better)
Translates to: DCQLEPEAPKVFSRLDDELPSIC*ELEDRA
Trigger: TGCCCTATCCTCCAGTTCTCAGCATATAGAAGGGAG...TTCATCATCAAGTCTAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR TCA 90 bp AATGCTCCCTTTGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCAGCGGAGTGGCTAGCAGATaGGAGAGCTCCCTTCTATAT +
Preference number: 4 (lower is better)
Translates to: NAPFGNSQKIRAPHRNSSGVASR*ESSLLY
Trigger: ATATAGAAGGGAGCTCTCTCATCTGCTAGCCACTCC...GCTGCTGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGGAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR TCA 90 bp CCATCTTTCTCTTATTTGATGTCTCTGATCAGCTCCTCTTCCAGCACAAACTGGAGATTGGATGCCCTCTaGTGTGGGGCTGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: PSFSYLMSLISSSSSTNWRLDAL*CGAVET
Trigger: TGTCTCCACAGCCCCACATCAGAGGGCATCCAATCT...CCAGTTTGTGCTGGAAGAGGAGCTGATCAGAGACATCAAATAAGAGAAAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR TCA 90 bp GCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAGACTTGATGATGAAGCACCACCACTCTTGCTTTTaGGGTGGAAAGAAATCCGGA +
Preference number: 4 (lower is better)
Translates to: ANWSLKPPKSSLDLMMKHHHSCF*GGKKSG
Trigger: TCCGGATTTCTTTCCACCTCAAAAGCAAGAGTGGTG...GTGCTTCATCATCAAGTCTAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395404.7
CDS-3UTR GCA 90 bp TGTACATATGGACAAGTTCAAGGCAGTATGGTCTACTTCTGGGAAGGCCTGGATTCCCTTTCTCTCAGATaGTGGTGCAGATCCCGGATG +
Preference number: 4 (lower is better)
Translates to: CTYGQVQGSMVYFWEGLDSLSLR*WCRSRM
Trigger: CATCCGGGATCTGCACCAGCATCTGAGAGAAAGGGA...ATCCAGGCCTTCCCAGAAGTAGACCATACTGCCTTGAACTTGTCCATATGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR GCA 90 bp TCCAAGGTAAGTGCAGACGAAGGCAGCAACCACCGTGACAATGAAATTGAAGATTCCCTTTCTCTCAGATaGTGGTGCAGATCCCGGATG +
Preference number: 4 (lower is better)
Translates to: SKVSADEGSNHRDNEIEDSLSLR*WCRSRM
Trigger: CATCCGGGATCTGCACCAGCATCTGAGAGAAAGGGA...ATCTTCAATTTCATTGTCACGGTGGTTGCTGCCTTCGTCTGCACTTACCTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555264.6
CDS-3UTR GCA 90 bp TTGACTGAGTCGGTGACTGCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTATTCAATGATCTCACTTaGTTTCCCAGGTCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LTESVTANWSLKPPKSSLFNDLT*FPRSLR
Trigger: TCTCAGCGACCTGGGAAAGCAAGTGAGATCATTGAA...TAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGCAGTCACCGACTCAGTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR GCA 90 bp GCAGCAACCACCGTGACAATGAAATTGAAGATGGTGATGACCAGAGCCTTCAATGGCTTCCAAGGTAAGTaGAGACGAAGGCAGCAACCA +
Preference number: 4 (lower is better)
Translates to: AATTVTMKLKMVMTRAFNGFQGK*RRRQQP
Trigger: TGGTTGCTGCCTTCGTCTGCACTTACCTTGGAAGCC...ATTGAAGGCTCTGGTCATCACCATCTTCAATTTCATTGTCACGGTGGTTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555264.6
ENST00000580868.5
CDS-3UTR GCA 90 bp CTCTTATTTGATGTCTCTGATCAGCTCCTCTTCCAGCACAAACTGGAGAAAGGGCCTCCCAGTGCCCCCTaGTTTTTCATTGAGACAAGG +
Preference number: 4 (lower is better)
Translates to: LLFDVSDQLLFQHKLEKGPPSAP*FFIETR
Trigger: CCTTGTCTCAATGAAAAAGCAGGGGGCACTGGGAGG...CCCTTTCTCCAGTTTGTGCTGGAAGAGGAGCTGATCAGAGACATCAAATAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR GCA 90 bp GACTGCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAGACTTGATGATGAATCCCTGGACCCAGAGTaGATTACAGAAAGCATGGCA +
Preference number: 4 (lower is better)
Translates to: DCQLEPEAPKVFSRLDDESLDPE*ITESMA
Trigger: TGCCATGCTTTCTGTAATGCACTCTGGGTCCAGGGA...TTCATCATCAAGTCTAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR GCA 90 bp GACTGCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAGACTTGATGATGAACCTCTGGAGCTGCTCTaGTTTGGAGAGAAAACCATG +
Preference number: 4 (lower is better)
Translates to: DCQLEPEAPKVFSRLDDEPLELL*FGEKTM
Trigger: CATGGTTTTCTCTCCAAAGCAGAGCAGCTCCAGAGG...TTCATCATCAAGTCTAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR GCA 90 bp TACAAAAAGTCTGATGGGTTGACTGAGTCGGTGACTGCCAATTGGAGCCTGAAGGGACTGGAACTCACATaGTACTCTCAGGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: YKKSDGLTESVTANWSLKGLELT*YSQARS
Trigger: AGATCTGGCCTGAGAGTAGCATGTGAGTTCCAGTCC...CTTCAGGCTCCAATTGGCAGTCACCGACTCAGTCAACCCATCAGACTTTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395404.7
CDS-3UTR CCA 90 bp ATATTGGCTTCCAAGGTAAGTGCAGACGAAGGCAGCAACCACCGTGACAATGAACTTTCTCTCAGATGCTaGTGCAGATCCCGGATGAGA +
Preference number: 4 (lower is better)
Translates to: ILASKVSADEGSNHRDNELSLRC*CRSRMR
Trigger: TCTCATCCGGGATCTGCACCAGCATCTGAGAGAAAG...TTCATTGTCACGGTGGTTGCTGCCTTCGTCTGCACTTACCTTGGAAGCCAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555264.6
ENST00000580868.5
CDS-3UTR CCA 90 bp CTGACAAGTGACGTTGCGGGTGATCCGTTTATATTCCTCATTGGCCAGCTGTATCTTTCTCTCAGATGCTaGTGCAGATCCCGGATGAGA +
Preference number: 4 (lower is better)
Translates to: LTSDVAGDPFIFLIGQLYLSLRC*CRSRMR
Trigger: TCTCATCCGGGATCTGCACCAGCATCTGAGAGAAAG...ATACAGCTGGCCAATGAGGAATATAAACGGATCACCCGCAACGTCACTTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580868.5
CDS-3UTR CCA 90 bp GCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAGACTTGATGATGAAGCACGAGGGCCGTTTGCCATaGAAATTTATCTCCATCACC +
Preference number: 4 (lower is better)
Translates to: ANWSLKPPKSSLDLMMKHEGRLP*KFISIT
Trigger: GGTGATGGAGATAAATTTCCATGGCAAACGGCCCTC...GTGCTTCATCATCAAGTCTAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR CAA 72 bp CCTGACAGATCTGGGATGGAGGCAGGTATAGCAGCATaGGGTTTTGGTATCACCATCACCTGTAATACCAAC +
Preference number: 4 (lower is better)
Translates to: PDRSGMEAGIAA*GFGITITCNTN
Trigger: GTTGGTATTACAGGTGATGGTGATACCAAAACCCAATGCTGCTATACCTGCCTCCATCCCAGATCTGTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR TCA 90 bp AGATCTGGGATGGAGGCAGGTATAGCAGCATTGGGTTTTGGTATCACCATCACCGCGAGGCCATTTCTGTaGAGATATATTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: RSGMEAGIAALGFGITITARPFL*RYIGFQ
Trigger: TTGGAAGCCAATATATCTTCACAGAAATGGCCTCGC...GGTGATGGTGATACCAAAACCCAATGCTGCTATACCTGCCTCCATCCCAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR TCA 90 bp CCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCAAGGAGGAGCAGACCCTaGACAGTTAGAACTATGGAA +
Preference number: 4 (lower is better)
Translates to: PMLPLEIHRRLGLPTETARRSRP*TVRTME
Trigger: TTCCATAGTTCTAACTGTTCAGGGTCTGCTCCTCCT...TGCTGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR TCA 90 bp CCGCGAGGCCATTTCTGTGAAGATATATTGGCTTCCAAGGTAAGTGCAGACGAAGACCAGAGCCTTCAATaGTCTCACTCACCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: PRGHFCEDILASKVSADEDQSLQ*SHSPCF
Trigger: AAAGCAAGGTGAGTGAGATCATTGAAGGCTCTGGTC...TTCGTCTGCACTTACCTTGGAAGCCAATATATCTTCACAGAAATGGCCTCGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555264.6
CDS-3UTR GCA 90 bp AATGCAGCTAGCACCCGCGAGGCCATTTCTGTGAAGATATATTGGCTTCCAAGGGGAGATAGATTTCACTaGCTTCTAGGAGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: NAASTREAISVKIYWLPRGDRFH*LLGAHG
Trigger: TCCATGAGCTCCTAGAAGGCAGTGAAATCTATCTCC...CCTTGGAAGCCAATATATCTTCACAGAAATGGCCTCGCGGGTGCTAGCTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555264.6
CDS-3UTR GCA 90 bp CTAACTGGAGCTGAATACAAAAAGTCTGATGGGTTGACTGAGTCGGTGACTGCCCTCAGCCTCCCAAAATaGTACGATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: LTGAEYKKSDGLTESVTALSLPK*YDYRCE
Trigger: CTCACACCTGTAATCGTAGCATTTTGGGAGGCTGAG...GGCAGTCACCGACTCAGTCAACCCATCAGACTTTTTGTATTCAGCTCCAGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR GCA 90 bp GAAATCGCTATGCTTTGTGTTGTCACAGGAGTTAAAATAGGAATACCCTGCATAGTTCTTCCCACCTCCTaGCAAGCAGTCCCTGGACCC +
Preference number: 4 (lower is better)
Translates to: EIAMLCVVTGVKIGIPCIVLPTS*QAVPGP
Trigger: GGGTCCAGGGACTGCTTGGCAGGAGGTGGGAAGAAC...TATGCAGGGTATTCCTATTTTAACTCCTGTGACAACACAAAGCATAGCGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR GCA 90 bp ATGTCTTGTATCCTGACAAGTGACGTTGCGGGTGATCCGTTTATATTCCTCATTCCCCTTTCTCTCAGATaGTGGTGCAGATCCCGGATG +
Preference number: 4 (lower is better)
Translates to: MSCILTSDVAGDPFIFLIPLSLR*WCRSRM
Trigger: CATCCGGGATCTGCACCAGCATCTGAGAGAAAGGGG...AATGAGGAATATAAACGGATCACCCGCAACGTCACTTGTCAGGATACAAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580868.5
CDS-3UTR CCA 90 bp CAGACGAAGGCAGCAACCACCGTGACAATGAAATTGAAGATGGTGATGACCAGAAGGCTTCACAACCTCTaGGAGATAGATTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: QTKAATTVTMKLKMVMTRRLHNL*EIDFTA
Trigger: GGCAGTGAAATCTATCTCCCAGAGGTTGTGAAGCCT...TCTGGTCATCACCATCTTCAATTTCATTGTCACGGTGGTTGCTGCCTTCGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555264.6
CDS-3UTR CCA 90 bp GTGTTATCTCAATCTCCTCCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGTCGGTGACTGCCAATTaGAGCCTGAAGCCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: VLSQSPPMLPLEIHRRLGSVTAN*SLKPPK
Trigger: CTTTGGGGGCTTCAGGCTCCAATTGGCAGTCACCGA...CCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGGAGGAGATTGAGATAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR CCA 90 bp CCATCTTTCTCTTATTTGATGTCTCTGATCAGCTCCTCTTCCAGCACAAACTGGACAGTGAGGCAGGAGTaGCTAGCAGATGAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: PSFSYLMSLISSSSSTNWTVRQE*LADERA
Trigger: AGCTCTCTCATCTGCTAGCCACTCCTGCCTCACTGT...CCAGTTTGTGCTGGAAGAGGAGCTGATCAGAGACATCAAATAAGAGAAAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp TACAAAAAGTCTGATGGGTTGACTGAGTCGGTGACTGCCAATTGGAGCCTGAAGCAGGCCCTAAGAAACTaGGAAGGCCCTAAACTTCTT +
Preference number: 4 (lower is better)
Translates to: YKKSDGLTESVTANWSLKQALRN*EGPKLL
Trigger: AAGAAGTTTAGGGCCTTCCCAGTTTCTTAGGGCCTG...CTTCAGGCTCCAATTGGCAGTCACCGACTCAGTCAACCCATCAGACTTTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp CCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCATTGGAGAGAAAACCATaGTGTTTGCGGTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: PMLPLEIHRRLGLPTETALERKP*CLRSAL
Trigger: CAGTGCAGACCGCAAACACCATGGTTTTCTCTCCAA...TGCTGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR TCA 90 bp TACAAAAAGTCTGATGGGTTGACTGAGTCGGTGACTGCCAATTGGAGCCTGAAGGCGAGGCCATTTCTGTaGAGATATATTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: YKKSDGLTESVTANWSLKARPFL*RYIGFQ
Trigger: TTGGAAGCCAATATATCTTCACAGAAATGGCCTCGC...CTTCAGGCTCCAATTGGCAGTCACCGACTCAGTCAACCCATCAGACTTTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR TCA 90 bp ATCAATGCAGCTAGCACCCGCGAGGCCATTTCTGTGAAGATATATTGGCTTCCAGCGAGGCCATTTCTGTaGAGATATATTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: INAASTREAISVKIYWLPARPFL*RYIGFQ
Trigger: TTGGAAGCCAATATATCTTCACAGAAATGGCCTCGC...TGGAAGCCAATATATCTTCACAGAAATGGCCTCGCGGGTGCTAGCTGCATTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555264.6
ENST00000580868.5
CDS-3UTR TCA 90 bp CAGACGAAGGCAGCAACCACCGTGACAATGAAATTGAAGATGGTGATGACCAGAGCGAGGCCATTTCTGTaGAGATATATTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: QTKAATTVTMKLKMVMTRARPFL*RYIGFQ
Trigger: TTGGAAGCCAATATATCTTCACAGAAATGGCCTCGC...TCTGGTCATCACCATCTTCAATTTCATTGTCACGGTGGTTGCTGCCTTCGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555264.6
ENST00000580868.5
CDS-3UTR TCA 90 bp GGAGCTGAATACAAAAAGTCTGATGGGTTGACTGAGTCGGTGACTGCCAATTGGTTTCTTGGAGGCTTCTaGACTCAATTACAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: GAEYKKSDGLTESVTANWFLGGF*TQLQVC
Trigger: GCAGACCTGTAATTGAGTTCAGAAGCCTCCAAGAAA...CCAATTGGCAGTCACCGACTCAGTCAACCCATCAGACTTTTTGTATTCAGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR GCA 90 bp CTAACTGGAGCTGAATACAAAAAGTCTGATGGGTTGACTGAGTCGGTGACTGCCGGAGATAGATTTCACTaGCTTCTAGGAGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: LTGAEYKKSDGLTESVTAGDRFH*LLGAHG
Trigger: TCCATGAGCTCCTAGAAGGCAGTGAAATCTATCTCC...GGCAGTCACCGACTCAGTCAACCCATCAGACTTTTTGTATTCAGCTCCAGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp CATTTCTGTGAAGATATATTGGCTTCCAAGGTAAGTGCAGACGAAGGCAGCAACAAAGAAACCAAGCGTTaGGGGCCACTGGAGCTATCA +
Preference number: 4 (lower is better)
Translates to: HFCEDILASKVSADEGSNKETKR*GPLELS
Trigger: TGATAGCTCCAGTGGCCCCCAACGCTTGGTTTCTTT...GTTGCTGCCTTCGTCTGCACTTACCTTGGAAGCCAATATATCTTCACAGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555264.6
ENST00000580868.5
CDS-3UTR CCA 90 bp CCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCACCTTCTAGGAGCTCATaGAGGTATAGTTTGGAATCC +
Preference number: 4 (lower is better)
Translates to: PMLPLEIHRRLGLPTETAPSRSS*RYSLES
Trigger: GGATTCCAAACTATACCTCCATGAGCTCCTAGAAGG...TGCTGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp GATATATTGGCTTCCAAGGTAAGTGCAGACGAAGGCAGCAACCACCGTGACAATCCTTCTAGGAGCTCATaGAGGTATAGTTTGGAATCC +
Preference number: 4 (lower is better)
Translates to: DILASKVSADEGSNHRDNPSRSS*RYSLES
Trigger: GGATTCCAAACTATACCTCCATGAGCTCCTAGAAGG...ATTGTCACGGTGGTTGCTGCCTTCGTCTGCACTTACCTTGGAAGCCAATATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555264.6
CDS-3UTR CCA 90 bp CCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCAAGTATGGTCTACTTCTaGGAAGGCCTGGATTCCATT +
Preference number: 4 (lower is better)
Translates to: PMLPLEIHRRLGLPTETASMVYF*EGLDSI
Trigger: AATGGAATCCAGGCCTTCCCAGAAGTAGACCATACT...TGCTGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp CCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCATCTTCCAGCACAAACTaGAGAAAGGGGATCCTTTCT +
Preference number: 4 (lower is better)
Translates to: PMLPLEIHRRLGLPTETASSSTN*RKGILS
Trigger: AGAAAGGATCCCCTTTCTCCAGTTTGTGCTGGAAGA...TGCTGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp CCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCAGTCTGTCTTATCTTCTaGAAAAGGGGCCTAACACCA +
Preference number: 4 (lower is better)
Translates to: PMLPLEIHRRLGLPTETAVCLIF*KRGLTP
Trigger: TGGTGTTAGGCCCCTTTTCCAGAAGATAAGACAGAC...TGCTGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp CCATCTTTCTCTTATTTGATGTCTCTGATCAGCTCCTCTTCCAGCACAAACTGGTCTGATGTGGGGCTGTaGAGACAACCTGACAGATCT +
Preference number: 4 (lower is better)
Translates to: PSFSYLMSLISSSSSTNWSDVGL*RQPDRS
Trigger: AGATCTGTCAGGTTGTCTCCACAGCCCCACATCAGA...CCAGTTTGTGCTGGAAGAGGAGCTGATCAGAGACATCAAATAAGAGAAAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR TCA 90 bp ATGAAATTGAAGATGGTGATGACCAGAGCCTTCAATGATCTCACTTGCTTTCCCGACCAGAGCCTTCAATaGTCTCACTTGCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: MKLKMVMTRAFNDLTCFPDQSLQ*SHLLSQ
Trigger: CTGGGAAAGCAAGTGAGATCATTGAAGGCTCTGGTC...GGGAAAGCAAGTGAGATCATTGAAGGCTCTGGTCATCACCATCTTCAATTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580868.5
CDS-3UTR TCA 90 bp CAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAGACTTGATGATGAAGCACCACAGGAGTACATACAGTaGACCAAAAAGAGTGTACCA +
Preference number: 4 (lower is better)
Translates to: QLEPEAPKVFSRLDDEAPQEYIQ*TKKSVP
Trigger: TGGTACACTCTTTTTGGTTCACTGTATGTACTCCTG...TGGTGCTTCATCATCAAGTCTAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR TCA 90 bp CCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCAACTGGATTCAAATCCTaGCTTTGCGATGTAACTGTG +
Preference number: 4 (lower is better)
Translates to: PMLPLEIHRRLGLPTETATGFKS*LCDVTV
Trigger: CACAGTTACATCGCAAAGTCAGGATTTGAATCCAGT...TGCTGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR GCA 90 bp CTCTTATTTGATGTCTCTGATCAGCTCCTCTTCCAGCACAAACTGGAGAAAGGGTTCAATGATCTCACTTaGTTTCCCAGGTCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LLFDVSDQLLFQHKLEKGFNDLT*FPRSLR
Trigger: TCTCAGCGACCTGGGAAAGCAAGTGAGATCATTGAA...CCCTTTCTCCAGTTTGTGCTGGAAGAGGAGCTGATCAGAGACATCAAATAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR GCA 90 bp CCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCACTCAATCTCCTCCAATaGTCCCTTTGGAAATTCACA +
Preference number: 4 (lower is better)
Translates to: PMLPLEIHRRLGLPTETALNLLQ*SLWKFT
Trigger: TGTGAATTTCCAAAGGGAGCATTGGAGGAGATTGAG...TGCTGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR GCA 90 bp CCATCTTTCTCTTATTTGATGTCTCTGATCAGCTCCTCTTCCAGCACAAACTGGCTTGGTCTCCCAAAGTaGTGGGATTACAGGCATGTA +
Preference number: 4 (lower is better)
Translates to: PSFSYLMSLISSSSSTNWLGLPK*WDYRHV
Trigger: TACATGCCTGTAATCCCAGCACTTTGGGAGACCAAG...CCAGTTTGTGCTGGAAGAGGAGCTGATCAGAGACATCAAATAAGAGAAAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR GCA 90 bp GTCGGTGACTGCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAGACTTGATCAAAAGAGCAGAAACTaGACAAGCAAATTTGTCATC +
Preference number: 4 (lower is better)
Translates to: VGDCQLEPEAPKVFSRLDQKSRN*TSKFVI
Trigger: GATGACAAATTTGCTTGTGCAGTTTCTGCTCTTTTG...ATCAAGTCTAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGCAGTCACCGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395404.7
CDS-3UTR CCA 90 bp GAGAGCTCCCTTCTATATGCTGAGAACTGGAGGATAGGGCATTTGGTTCTCCCCTATAGCTCAGGTTACTaGAAACACTGTAAAATGCCA +
Preference number: 4 (lower is better)
Translates to: ESSLLYAENWRIGHLVLPYSSGY*KHCKMP
Trigger: TGGCATTTTACAGTGTTTCCAGTAACCTGAGCTATA...GGGGAGAACCAAATGCCCTATCCTCCAGTTCTCAGCATATAGAAGGGAGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp TACAAAAAGTCTGATGGGTTGACTGAGTCGGTGACTGCCAATTGGAGCCTGAAGCTATATGCTGAGAACTaGAGGATAGGGCATTTGGTT +
Preference number: 4 (lower is better)
Translates to: YKKSDGLTESVTANWSLKLYAEN*RIGHLV
Trigger: AACCAAATGCCCTATCCTCCAGTTCTCAGCATATAG...CTTCAGGCTCCAATTGGCAGTCACCGACTCAGTCAACCCATCAGACTTTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp CCATCTTTCTCTTATTTGATGTCTCTGATCAGCTCCTCTTCCAGCACAAACTGGTCACAAAGATCAGATTaGATGCCCTCTGATGTGGGG +
Preference number: 4 (lower is better)
Translates to: PSFSYLMSLISSSSSTNWSQRSD*MPSDVG
Trigger: CCCCACATCAGAGGGCATCCAATCTGATCTTTGTGA...CCAGTTTGTGCTGGAAGAGGAGCTGATCAGAGACATCAAATAAGAGAAAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp CAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAGACTTGATGATGAAGCACCACTCTTGCTTTTGAGGTaGAAAGAAATCCGGATTCCT +
Preference number: 4 (lower is better)
Translates to: QLEPEAPKVFSRLDDEAPLLLLR*KEIRIP
Trigger: AGGAATCCGGATTTCTTTCCACCTCAAAAGCAAGAG...TGGTGCTTCATCATCAAGTCTAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395404.7
3UTR CAA 72 bp CCTAACACCATTTCCTTTTGCAAAAAGGTAGCTGCCTaGCTTCCAGTTCTACCATCCTCTAGCAACCCATCT +
Preference number: 4 (lower is better)
Translates to: PNTISFCKKVAA*LPVLPSSSNPS
Trigger: AGATGGGTTGCTAGAGGATGGTAGAACTGGAAGCAAGGCAGCTACCTTTTTGCAAAAGGAAATGGTGTTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR TCA 90 bp GTGTTATCTCAATCTCCTCCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGCAGCAGTGTTTAGAATaGACTGGAGAAGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: VLSQSPPMLPLEIHRRLGQQCLE*TGEGRW
Trigger: CCATCTGCCTTCTCCAGTTCATTCTAAACACTGCTG...CCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGGAGGAGATTGAGATAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR TCA 90 bp GTGTTATCTCAATCTCCTCCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGGATTCCATTTGCTCCTaGTGGAAAAACCCTAGTCCC +
Preference number: 4 (lower is better)
Translates to: VLSQSPPMLPLEIHRRLGDSICS*WKNPSP
Trigger: GGGACTAGGGTTTTTCCATCAGGAGCAAATGGAATC...CCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGGAGGAGATTGAGATAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR TCA 90 bp CCTCCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACATATGGAGAAAGCTGGTaGTCAGTTTGTACATATGGA +
Preference number: 4 (lower is better)
Translates to: PPMLPLEIHRRLGLPTETYGESW*SVCTYG
Trigger: TCCATATGTACAAACTGATCACCAGCTTTCTCCATA...TGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR GCA 90 bp CTCTTATTTGATGTCTCTGATCAGCTCCTCTTCCAGCACAAACTGGAGAAAGGGCTCAATCTCCTCCAATaGTCCCTTTGGAAATTCACA +
Preference number: 4 (lower is better)
Translates to: LLFDVSDQLLFQHKLEKGLNLLQ*SLWKFT
Trigger: TGTGAATTTCCAAAGGGAGCATTGGAGGAGATTGAG...CCCTTTCTCCAGTTTGTGCTGGAAGAGGAGCTGATCAGAGACATCAAATAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp ATCAGTTTGTACATATGGACAAGTTCAAGGCAGTATGGTCTACTTCTGGGAAGGACAGATACCTCTTGGTaGGAGGTATTACCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: ISLYIWTSSRQYGLLLGRTDTSW*EVLPRL
Trigger: AAGCCTGGGTAATACCTCCCACCAAGAGGTATCTGT...CCTTCCCAGAAGTAGACCATACTGCCTTGAACTTGTCCATATGTACAAACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR GCA 90 bp GTGTTATCTCAATCTCCTCCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGTTGCAAAAAGGTAGCTaGCTTGCTTCCAGTTCTACC +
Preference number: 4 (lower is better)
Translates to: VLSQSPPMLPLEIHRRLGLQKGS*LASSST
Trigger: GGTAGAACTGGAAGCAAGGCAGCTACCTTTTTGCAA...CCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGGAGGAGATTGAGATAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR GCA 90 bp ATCAGTTTGTACATATGGACAAGTTCAAGGCAGTATGGTCTACTTCTGGGAAGGTCATCCAGGCTAGAGTaGAATAGCATGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: ISLYIWTSSRQYGLLLGRSSRLE*NSMILA
Trigger: AGCCAAGATCATGCTATTGCACTCTAGCCTGGATGA...CCTTCCCAGAAGTAGACCATACTGCCTTGAACTTGTCCATATGTACAAACTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR GCA 90 bp GAAATCGCTATGCTTTGTGTTGTCACAGGAGTTAAAATAGGAATACCCTGCATACTCCACCTCTGGAGCTaGTCTGCTTTGGAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: EIAMLCVVTGVKIGIPCILHLWS*SALERK
Trigger: TTTTCTCTCCAAAGCAGAGCAGCTCCAGAGGTGGAG...TATGCAGGGTATTCCTATTTTAACTCCTGTGACAACACAAAGCATAGCGATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp CCTCCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACATCCTTTCTGTTTTCTTaGAGGCTTCTGAACTCAATT +
Preference number: 4 (lower is better)
Translates to: PPMLPLEIHRRLGLPTETSFLFS*RLLNSI
Trigger: AATTGAGTTCAGAAGCCTCCAAGAAAACAGAAAGGA...TGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp ATCAGTTTGTACATATGGACAAGTTCAAGGCAGTATGGTCTACTTCTGGGAAGGGTTTGCGGTCTGCACTaGATTCAAATCCTGACTTTG +
Preference number: 4 (lower is better)
Translates to: ISLYIWTSSRQYGLLLGRVCGLH*IQILTL
Trigger: CAAAGTCAGGATTTGAATCCAGTGCAGACCGCAAAC...CCTTCCCAGAAGTAGACCATACTGCCTTGAACTTGTCCATATGTACAAACTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp CTCTTATTTGATGTCTCTGATCAGCTCCTCTTCCAGCACAAACTGGAGAAAGGGCTCTGTACCTTAATCTaGATTGTTGTGCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: LLFDVSDQLLFQHKLEKGLCTLI*IVVLCK
Trigger: TTTGCAGAGCACAACAATCCAGATTAAGGTACAGAG...CCCTTTCTCCAGTTTGTGCTGGAAGAGGAGCTGATCAGAGACATCAAATAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR CAA 72 bp AAAGATGTGTTATCTCAATCTCCTCCAATGCTCCCTTaGGAAATTCACAGAAGATTAGGGCTCCCCACAGAA +
Preference number: 4 (lower is better)
Translates to: KDVLSQSPPMLP*EIHRRLGLPTE
Trigger: TTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGGAGGAGATTGAGATAACACATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
3UTR CAA 72 bp AGCACAAACTGGAGAAAGGGGATCCTTTCTGTTTTCTaGGAGGCTTCTGAACTCAATTACAGGTCTGCATTA +
Preference number: 4 (lower is better)
Translates to: STNWRKGILSVF*EASELNYRSAL
Trigger: TAATGCAGACCTGTAATTGAGTTCAGAAGCCTCCAAGAAAACAGAAAGGATCCCCTTTCTCCAGTTTGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp TACAAAAAGTCTGATGGGTTGACTGAGTCGGTGACTGCCAATTGGAGCCTGAAGATCAGTTTGTACATATaGACAAGTTCAAGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: YKKSDGLTESVTANWSLKISLYI*TSSRQY
Trigger: ATACTGCCTTGAACTTGTCCATATGTACAAACTGAT...CTTCAGGCTCCAATTGGCAGTCACCGACTCAGTCAACCCATCAGACTTTTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR GCA 90 bp TGTTTTAAAGATGTGTTATCTCAATCTCCTCCAATGCTCCCTTTGGAAATTCACAAAGATCAGATTGGATaGCCTCTGATGTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: CFKDVLSQSPPMLPLEIHKDQIG*PLMWGC
Trigger: ACAGCCCCACATCAGAGGGCATCCAATCTGATCTTT...GTGAATTTCCAAAGGGAGCATTGGAGGAGATTGAGATAACACATCTTTAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp ATCAGTTTGTACATATGGACAAGTTCAAGGCAGTATGGTCTACTTCTGGGAAGGCATGGAGGTATAGTTTaGAATCCCTTTCTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: ISLYIWTSSRQYGLLLGRHGGIV*NPFLSD
Trigger: ATCTGAGAGAAAGGGATTCCAAACTATACCTCCATG...CCTTCCCAGAAGTAGACCATACTGCCTTGAACTTGTCCATATGTACAAACTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp GTGACAATGAAATTGAAGATGGTGATGACCAGAGCCTTCAATGATCTCACTCACCATGGAGGTATAGTTTaGAATCCCTTTCTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: VTMKLKMVMTRAFNDLTHHGGIV*NPFLSD
Trigger: ATCTGAGAGAAAGGGATTCCAAACTATACCTCCATG...GTGAGTGAGATCATTGAAGGCTCTGGTCATCACCATCTTCAATTTCATTGTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555264.6
CDS-3UTR CCA 90 bp AAGAAGGACCATAGTGATCATTTAATCTCTATGAGTCTGTCTTATCTTCTGGAAAGGCTTCACAACCTCTaGGAGATAGATTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: KKDHSDHLISMSLSYLLERLHNL*EIDFTA
Trigger: GGCAGTGAAATCTATCTCCCAGAGGTTGTGAAGCCT...TTCCAGAAGATAAGACAGACTCATAGAGATTAAATGATCACTATGGTCCTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CCA 90 bp TACAAGACTTCAGAACAACATAGGCGTCTTTGGCTCCATTTAACAGAAGAAGGAGTAAAGGGCTTTACATaGTGTGTAACACATCGTAAA +
Preference number: 4 (lower is better)
Translates to: YKTSEQHRRLWLHLTEEGVKGFT*CVTHRK
Trigger: TTTACGATGTGTTACACACCATGTAAAGCCCTTTAC...TCCTTCTTCTGTTAAATGGAGCCAAAGACGCCTATGTTGTTCTGAAGTCTTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR GCA 90 bp AAGAAGGACCATAGTGATCATTTAATCTCTATGAGTCTGTCTTATCTTCTGGAACTATGGAAATCGCTATaGTTTGTGTTGTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: KKDHSDHLISMSLSYLLELWKSL*FVLSQE
Trigger: CTCCTGTGACAACACAAAGCATAGCGATTTCCATAG...TTCCAGAAGATAAGACAGACTCATAGAGATTAAATGATCACTATGGTCCTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS CCA 90 bp GGTTCCCGGACTGGAGACTGGGGCTCACCCCTTTCTCTCAGATGCTaGTGCAGATCCCGGATGAGACGGAAAGAAACCAAGCGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: GSRTGDWGSPLSLRC*CRSRMRRKETKRWG
Trigger: CCCCCAACGCTTGGTTTCTTTCCGTCTCATCCGGGATCTGCACCAGCATCTGAGAGAAAGGGGTGAGCCCCAGTCTCCAGTCCGGGAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580868.5
CDS TCA 90 bp GCACCAGTTACAGTTCTCCCAGCTCGCCTTCCATTGCCCGCACCATaGCATACAGCTCGGCCAGACCCACCACAGAGGCGACGATCAATG +
Preference number: 5 (lower is better)
Translates to: APVTVLPARLPLPAP*HTARPDPPQRRRSM
Trigger: CATTGATCGTCGCCTCTGTGGTGGGTCTGGCCGAGCTGTATGTCATGGTGCGGGCAATGGAAGGCGAGCTGGGAGAACTGTAACTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292114.8
ENST00000395404.7
ENST00000585027.1
CDS GCA 90 bp CTGGGTTCCCGGACTGGAGACTGGGGCTCACCCCTTTCTCTCAGATaGTGGTGCAGATCCCGGATGAGACGGAAAGAAACCAAGCGTTGG +
Preference number: 5 (lower is better)
Translates to: LGSRTGDWGSPLSLR*WCRSRMRRKETKRW
Trigger: CCAACGCTTGGTTTCTTTCCGTCTCATCCGGGATCTGCACCAGCATCTGAGAGAAAGGGGTGAGCCCCAGTCTCCAGTCCGGGAACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580868.5
CDS CCA 90 bp AGATGCTGGTGCAGATCCCGGATGAGACGGAAAGAAACCAAGCGTTaGGGGCCACTGGAGCTATCACCGCCCTTGTGCTTCTTCCCCAGC +
Preference number: 5 (lower is better)
Translates to: RCWCRSRMRRKETKR*GPLELSPPLCFFPS
Trigger: GCTGGGGAAGAAGCACAAGGGCGGTGATAGCTCCAGTGGCCCCCAACGCTTGGTTTCTTTCCGTCTCATCCGGGATCTGCACCAGCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000292114.8
ENST00000483505.6
ENST00000555264.6
ENST00000579762.1
ENST00000580868.5
ENST00000581386.5
CDS GCA 90 bp TTGATGATGAAGCACCAGTTACAGTTCTCCCAGCTCGCCTTCCATTaGCCGCACCATGACATACAGCTCGGCCAGACCCACCACAGAGGC +
Preference number: 5 (lower is better)
Translates to: LMMKHQLQFSQLAFH*PHHDIQLGQTHHRG
Trigger: GCCTCTGTGGTGGGTCTGGCCGAGCTGTATGTCATGGTGCGGGCAATGGAAGGCGAGCTGGGAGAACTGTAACTGGTGCTTCATCATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292114.8
ENST00000395404.7
ENST00000585027.1
CDS-3UTR CAA 90 bp CTTTCCCAGGTCGCTGAGAGTCCCACCATGTCTTGTATCCTGACAAGTGACGTTGAGCTATCACCGCCCTaGTGCTTCTTCCCCAGCGCG +
Preference number: 5 (lower is better)
Translates to: LSQVAESPTMSCILTSDVELSPP*CFFPSA
Trigger: CGCGCTGGGGAAGAAGCACAAGGGCGGTGATAGCTC...AACGTCACTTGTCAGGATACAAGACATGGTGGGACTCTCAGCGACCTGGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580868.5
CDS TCA 90 bp GGGCACCCTGCCCTGCCCAGTGCCTACTCACCGAGGCCATTTCTGTaGAGATATATTGGCTTCCAAGGTAAGTGCAGACGAAGGCAGCAA +
Preference number: 5 (lower is better)
Translates to: GHPALPSAYSPRPFL*RYIGFQGKCRRRQQ
Trigger: TTGCTGCCTTCGTCTGCACTTACCTTGGAAGCCAATATATCTTCACAGAAATGGCCTCGGTGAGTAGGCACTGGGCAGGGCAGGGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509083.2
CDS-3UTR CAA 90 bp GAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCAGCTGGCCTGGGCTGGGGGGACGAGGGCCGTTaGCCATGGAAATTTATCTCC +
Preference number: 5 (lower is better)
Translates to: EIHRRLGLPTETAAGLGWGDEGR*PWKFIS
Trigger: GGAGATAAATTTCCATGGCAAACGGCCCTCGTCCCC...CCAGCCCAGGCCAGCTGCTGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CAA 90 bp AATGCTCCCTTTGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCAGCGAGCTATCACCGCCCTaGTGCTTCTTCCCCAGCGCG +
Preference number: 5 (lower is better)
Translates to: NAPFGNSQKIRAPHRNSSELSPP*CFFPSA
Trigger: CGCGCTGGGGAAGAAGCACAAGGGCGGTGATAGCTC...GCTGCTGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGGAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CAA 90 bp ATATTGGCTTCCAAGGTAAGTGCAGACGAAGGCAGCAACCACCGTGACAATGAAGAGCTATCACCGCCCTaGTGCTTCTTCCCCAGCGCG +
Preference number: 5 (lower is better)
Translates to: ILASKVSADEGSNHRDNEELSPP*CFFPSA
Trigger: CGCGCTGGGGAAGAAGCACAAGGGCGGTGATAGCTC...TTCATTGTCACGGTGGTTGCTGCCTTCGTCTGCACTTACCTTGGAAGCCAATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555264.6
ENST00000580868.5
CDS-3UTR CAA 90 bp TGCAAACGAACGGGGACGAGGGCCGTTTGCCATGGAAATTTATCTCCATCACCTTGGAGGATAGGGCATTaGGTTCTCCCCTCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: CKRTGTRAVCHGNLSPSPWRIGH*VLPSQC
Trigger: GCACTGGGAGGGGAGAACCAAATGCCCTATCCTCCA...AGGTGATGGAGATAAATTTCCATGGCAAACGGCCCTCGTCCCCGTTCGTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS TCA 90 bp ATAGTTTGGAATCCCTTTCTCTCAGATGCTGGTGCAGATCCCGGATaGGACGGAAAGAAACCAAGCGTTGGGGGCCACTGGAGCTATCAC +
Preference number: 5 (lower is better)
Translates to: IVWNPFLSDAGADPG*DGKKPSVGGHWSYH
Trigger: GTGATAGCTCCAGTGGCCCCCAACGCTTGGTTTCTTTCCGTCTCATCCGGGATCTGCACCAGCATCTGAGAGAAAGGGATTCCAAACTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292114.8
ENST00000483505.6
ENST00000555264.6
ENST00000581386.5
CDS GCA 90 bp GGAGGAGCCAGAGAGGGCACCTTTAGTTCAACATTCTCTAGGAGGTaGTCTTATCTCATGGCTCCCCCACCAACTGGGTTTCAGTCAAAC +
Preference number: 5 (lower is better)
Translates to: GGAREGTFSSTFSRR*SYLMAPPPTGFQSN
Trigger: GTTTGACTGAAACCCAGTTGGTGGGGGAGCCATGAGATAAGAGCACCTCCTAGAGAATGTTGAACTAAAGGTGCCCTCTCTGGCTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483505.6
CDS GCA 90 bp GGCCAGATCTTTCAACACAGCTTTTGCCATCCCCTTTCTCTCAGATaGTGGTGCAGATCCCGGATGAGACGGAAAGAAACCAAGCGTTGG +
Preference number: 5 (lower is better)
Translates to: GQIFQHSFCHPLSLR*WCRSRMRRKETKRW
Trigger: CCAACGCTTGGTTTCTTTCCGTCTCATCCGGGATCTGCACCAGCATCTGAGAGAAAGGGGATGGCAAAAGCTGTGTTGAAAGATCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579762.1
CDS CCA 90 bp CAGATCTTTCAACACAGCTTTTGCCATCCCCTTTCTCTCAGATGCTaGTGCAGATCCCGGATGAGACGGAAAGAAACCAAGCGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: QIFQHSFCHPLSLRC*CRSRMRRKETKRWG
Trigger: CCCCCAACGCTTGGTTTCTTTCCGTCTCATCCGGGATCTGCACCAGCATCTGAGAGAAAGGGGATGGCAAAAGCTGTGTTGAAAGATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579762.1
CDS-3UTR CAA 90 bp AATGCAGCTAGCACCCGCGAGGCCATTTCTGTGAAGATATATTGGCTTCCAAGGGAAAGAAACCAAGCGTaGGGGGCCACTGGAGCTATC +
Preference number: 5 (lower is better)
Translates to: NAASTREAISVKIYWLPRERNQA*GATGAI
Trigger: GATAGCTCCAGTGGCCCCCAACGCTTGGTTTCTTTC...CCTTGGAAGCCAATATATCTTCACAGAAATGGCCTCGCGGGTGCTAGCTGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555264.6
ENST00000580868.5
CDS-3UTR CAA 90 bp TTGACTGAGTCGGTGACTGCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTACCACACAGATACCTCTaGGTGGGAGGTATTACCCAG +
Preference number: 5 (lower is better)
Translates to: LTESVTANWSLKPPKSSLPHRYL*VGGITQ
Trigger: CTGGGTAATACCTCCCACCAAGAGGTATCTGTGTGG...TAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGCAGTCACCGACTCAGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CAA 90 bp CCCTTTGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCAGCTGGCCTTTTCTCAAGGGTGAATaGGGCCTAGGTGTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: PFGNSQKIRAPHRNSSWPFLKGE*GLGVPG
Trigger: TCCAGGCACACCTAGGCCCAATTCACCCTTGAGAAA...AGGCCAGCTGCTGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395404.7
CDS-3UTR CAA 90 bp CAGACGAAGGCAGCAACCACCGTGACAATGAAATTGAAGATGGTGATGACCAGAGGCAGGAGGATCACCTaGAGGCTGGGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: QTKAATTVTMKLKMVMTRGRRIT*RLGVQD
Trigger: GTCTTGAACTCCCAGCCTCAAGGTGATCCTCCTGCC...TCTGGTCATCACCATCTTCAATTTCATTGTCACGGTGGTTGCTGCCTTCGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555264.6
CDS-3UTR CAA 90 bp CTAACTGGAGCTGAATACAAAAAGTCTGATGGGTTGACTGAGTCGGTGACTGCCGAAAGAAACCAAGCGTaGGGGGCCACTGGAGCTATC +
Preference number: 5 (lower is better)
Translates to: LTGAEYKKSDGLTESVTAERNQA*GATGAI
Trigger: GATAGCTCCAGTGGCCCCCAACGCTTGGTTTCTTTC...GGCAGTCACCGACTCAGTCAACCCATCAGACTTTTTGTATTCAGCTCCAGTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CAA 90 bp AATGCAGCTAGCACCCGCGAGGCCATTTCTGTGAAGATATATTGGCTTCCAAGGATGATCTCACTCACCTaGCTTTCCCAGGTCGCTGAG +
Preference number: 5 (lower is better)
Translates to: NAASTREAISVKIYWLPRMISLT*LSQVAE
Trigger: CTCAGCGACCTGGGAAAGCAAGGTGAGTGAGATCAT...CCTTGGAAGCCAATATATCTTCACAGAAATGGCCTCGCGGGTGCTAGCTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555264.6
CDS GCA 90 bp CTGGGTTCCGTGGAGGCTTCACAACCTCTGGGAGATAGATTTCACTaGCTTCTAGGAGCTCATGGAGGTATAGTTTGGAATCCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: LGSVEASQPLGDRFH*LLGAHGGIVWNPFL
Trigger: GAGAAAGGGATTCCAAACTATACCTCCATGAGCTCCTAGAAGGCAGTGAAATCTATCTCCCAGAGGTTGTGAAGCCTCCACGGAACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292114.8
ENST00000483505.6
ENST00000555264.6
ENST00000581386.5
CDS-3UTR CAA 90 bp GAGAGCTCCCTTCTATATGCTGAGAACTGGAGGATAGGGCATTTGGTTCTCCCCAAAAAGGTAGCTGCCTaGCTTCCAGTTCTACCATCC +
Preference number: 5 (lower is better)
Translates to: ESSLLYAENWRIGHLVLPKKVAA*LPVLPS
Trigger: GGATGGTAGAACTGGAAGCAAGGCAGCTACCTTTTT...GGGGAGAACCAAATGCCCTATCCTCCAGTTCTCAGCATATAGAAGGGAGCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS TCA 90 bp TCCTTCCCTTTACACATAAGGGAACTGAGGCCCAGCGAGGAGAAATaGCTCCTTCAAAGGATTAGTGACAGAGCTAGGACTGGAACTCAC +
Preference number: 5 (lower is better)
Translates to: SFPLHIRELRPSEEK*LLQRISDRARTGTH
Trigger: GTGAGTTCCAGTCCTAGCTCTGTCACTAATCCTTTGAAGGAGTCATTTCTCCTCGCTGGGCCTCAGTTCCCTTATGTGTAAAGGGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395404.7
ENST00000579762.1
CDS GCA 90 bp GACTCCTTCAAAGGATTAGTGACAGAGCTAGGACTGGAACTCACATaGTACTCTCAGGCCAGATCTTTCAACACAGCTTTTGCCATCCCC +
Preference number: 5 (lower is better)
Translates to: DSFKGLVTELGLELT*YSQARSFNTAFAIP
Trigger: GGGGATGGCAAAAGCTGTGTTGAAAGATCTGGCCTGAGAGTAGCATGTGAGTTCCAGTCCTAGCTCTGTCACTAATCCTTTGAAGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579762.1
CDS-3UTR CAA 90 bp GACTGCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAGACTTGATGATGAAAAAAAGTCTGATGGGTaGACTGAGTCGGTGACTGCC +
Preference number: 5 (lower is better)
Translates to: DCQLEPEAPKVFSRLDDEKKSDG*TESVTA
Trigger: GGCAGTCACCGACTCAGTCAACCCATCAGACTTTTT...TTCATCATCAAGTCTAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGCAGTC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR CAA 90 bp TGCAAACGAACGGGGACGAGGGCCGTTTGCCATGGAAATTTATCTCCATCACCTTGCAATAGCATGATCTaGGCTTACTCAGCTTACTGC +
Preference number: 5 (lower is better)
Translates to: CKRTGTRAVCHGNLSPSPCNSMI*AYSAYC
Trigger: GCAGTAAGCTGAGTAAGCCAAGATCATGCTATTGCA...AGGTGATGGAGATAAATTTCCATGGCAAACGGCCCTCGTCCCCGTTCGTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CAA 90 bp TACAAAAAGTCTGATGGGTTGACTGAGTCGGTGACTGCCAATTGGAGCCTGAAGTGGAGCTGCTCTGCTTaGGAGAGAAAACCATGGTGT +
Preference number: 5 (lower is better)
Translates to: YKKSDGLTESVTANWSLKWSCSA*ERKPWC
Trigger: ACACCATGGTTTTCTCTCCAAAGCAGAGCAGCTCCA...CTTCAGGCTCCAATTGGCAGTCACCGACTCAGTCAACCCATCAGACTTTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS TCA 90 bp CACCGTGACAATGAAATTGAAGATGGTGATGACCAGAGCCTTCAATaGTCTCACTTTGGGGAGGAGCCAGAGAGGGCACCTTTAGTTCAA +
Preference number: 5 (lower is better)
Translates to: HRDNEIEDGDDQSLQ*SHFGEEPERAPLVQ
Trigger: TTGAACTAAAGGTGCCCTCTCTGGCTCCTCCCCAAAGTGAGATCATTGAAGGCTCTGGTCATCACCATCTTCAATTTCATTGTCACGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483505.6
CDS-3UTR CAA 90 bp CCCTTTGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCAGCTGGCCTACCGTGACAATGAAATaGAAGATGGTGATGACCAGA +
Preference number: 5 (lower is better)
Translates to: PFGNSQKIRAPHRNSSWPTVTMK*KMVMTR
Trigger: TCTGGTCATCACCATCTTCAATTTCATTGTCACGGT...AGGCCAGCTGCTGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR CAA 90 bp TTGACTGAGTCGGTGACTGCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTACCTCCAATGCTCCCTTaGGAAATTCACAGAAGATTA +
Preference number: 5 (lower is better)
Translates to: LTESVTANWSLKPPKSSLPPMLP*EIHRRL
Trigger: TAATCTTCTGTGAATTTCCAAAGGGAGCATTGGAGG...TAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGCAGTCACCGACTCAGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR CAA 90 bp GTCGGTGACTGCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAGACTTGATCCTCCAATGCTCCCTTaGGAAATTCACAGAAGATTA +
Preference number: 5 (lower is better)
Translates to: VGDCQLEPEAPKVFSRLDPPMLP*EIHRRL
Trigger: TAATCTTCTGTGAATTTCCAAAGGGAGCATTGGAGG...ATCAAGTCTAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGCAGTCACCGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS GCA 90 bp GACTCCTTCAAAGGATTAGTGACAGAGCTAGGACTGGAACTCACATaGTACTCTCAGGCCAGATCTTTCAACACAGCTTTTGCCATCCTA +
Preference number: 5 (lower is better)
Translates to: DSFKGLVTELGLELT*YSQARSFNTAFAIL
Trigger: TAGGATGGCAAAAGCTGTGTTGAAAGATCTGGCCTGAGAGTAGCATGTGAGTTCCAGTCCTAGCTCTGTCACTAATCCTTTGAAGGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395404.7
CDS-3UTR CAA 90 bp AGATCTGGGATGGAGGCAGGTATAGCAGCATTGGGTTTTGGTATCACCATCACCACCGTGACAATGAAATaGAAGATGGTGATGACCAGA +
Preference number: 5 (lower is better)
Translates to: RSGMEAGIAALGFGITITTVTMK*KMVMTR
Trigger: TCTGGTCATCACCATCTTCAATTTCATTGTCACGGT...GGTGATGGTGATACCAAAACCCAATGCTGCTATACCTGCCTCCATCCCAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CAA 90 bp GTCGGTGACTGCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAGACTTGATAATGGGGATACTTATTaGCTCTCTGTTTGGGGTATA +
Preference number: 5 (lower is better)
Translates to: VGDCQLEPEAPKVFSRLDNGDTY*LSVWGI
Trigger: TATACCCCAAACAGAGAGCAAATAAGTATCCCCATT...ATCAAGTCTAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGCAGTCACCGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CAA 90 bp GCAACCACCGTGACAATGAAATTGAAGATGGTGATGACCAGAGCCTTCAATGATGAGTCCCACCATGTCTaGTATCCTTGTAATCCCAGC +
Preference number: 5 (lower is better)
Translates to: ATTVTMKLKMVMTRAFNDESHHV*YPCNPS
Trigger: GCTGGGATTACAAGGATACAAGACATGGTGGGACTC...ATCATTGAAGGCTCTGGTCATCACCATCTTCAATTTCATTGTCACGGTGGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555264.6
CDS-3UTR CAA 90 bp CCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCATCATGGAGGTATAGTTaGGAATCCCTTTCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: PMLPLEIHRRLGLPTETASWRYS*ESLSLR
Trigger: TCTGAGAGAAAGGGATTCCAAACTATACCTCCATGA...TGCTGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CAA 90 bp GCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAGACTTGATGATGAAGCACTTCTGTGAAGATATATaGGCTTCCAAGGTAAGTGCA +
Preference number: 5 (lower is better)
Translates to: ANWSLKPPKSSLDLMMKHFCEDI*ASKVSA
Trigger: TGCACTTACCTTGGAAGCCAATATATCTTCACAGAA...GTGCTTCATCATCAAGTCTAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR CAA 90 bp AATGCAGCTAGCACCCGCGAGGCCATTTCTGTGAAGATATATTGGCTTCCAAGGTTCTGTGAAGATATATaGGCTTCCAAGGTAAGTGCA +
Preference number: 5 (lower is better)
Translates to: NAASTREAISVKIYWLPRFCEDI*ASKVSA
Trigger: TGCACTTACCTTGGAAGCCAATATATCTTCACAGAA...CCTTGGAAGCCAATATATCTTCACAGAAATGGCCTCGCGGGTGCTAGCTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555264.6
ENST00000580868.5
CDS-3UTR CAA 90 bp GTGTTATCTCAATCTCCTCCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGAGGCCTGGATTCCATTaGCTCCTGATGGAAAAACCC +
Preference number: 5 (lower is better)
Translates to: VLSQSPPMLPLEIHRRLGRPGFH*LLMEKP
Trigger: GGGTTTTTCCATCAGGAGCAAATGGAATCCAGGCCT...CCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGGAGGAGATTGAGATAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CAA 90 bp CCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCACCATCTTTCTCTTATTaGATGTCTCTGATCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PMLPLEIHRRLGLPTETAPSFSY*MSLISS
Trigger: GGAGCTGATCAGAGACATCAAATAAGAGAAAGATGG...TGCTGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CAA 90 bp CTAACTGGAGCTGAATACAAAAAGTCTGATGGGTTGACTGAGTCGGTGACTGCCCAGATTTCACCACTCTaGCTTTTGAGGTGGAAAGAA +
Preference number: 5 (lower is better)
Translates to: LTGAEYKKSDGLTESVTAQISPL*LLRWKE
Trigger: TTCTTTCCACCTCAAAAGCAAGAGTGGTGAAATCTG...GGCAGTCACCGACTCAGTCAACCCATCAGACTTTTTGTATTCAGCTCCAGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395404.7
CDS-3UTR CAA 90 bp CAGACGAAGGCAGCAACCACCGTGACAATGAAATTGAAGATGGTGATGACCAGACGTTTATATTCCTCATaGGCCAGCTGTATCTTAATC +
Preference number: 5 (lower is better)
Translates to: QTKAATTVTMKLKMVMTRRLYSS*ASCILI
Trigger: GATTAAGATACAGCTGGCCAATGAGGAATATAAACG...TCTGGTCATCACCATCTTCAATTTCATTGTCACGGTGGTTGCTGCCTTCGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555264.6
ENST00000580868.5
CDS-3UTR CAA 90 bp TCCAAGGTAAGTGCAGACGAAGGCAGCAACCACCGTGACAATGAAATTGAAGATACCGTGACAATGAAATaGAAGATGGTGATGACCAGA +
Preference number: 5 (lower is better)
Translates to: SKVSADEGSNHRDNEIEDTVTMK*KMVMTR
Trigger: TCTGGTCATCACCATCTTCAATTTCATTGTCACGGT...ATCTTCAATTTCATTGTCACGGTGGTTGCTGCCTTCGTCTGCACTTACCTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555264.6
ENST00000580868.5
CDS-3UTR CAA 90 bp GTAAGTGCAGACGAAGGCAGCAACCACCGTGACAATGAAATTGAAGATGGTGATACCGTGACAATGAAATaGAAGATGGTGATGACCAGA +
Preference number: 5 (lower is better)
Translates to: VSADEGSNHRDNEIEDGDTVTMK*KMVMTR
Trigger: TCTGGTCATCACCATCTTCAATTTCATTGTCACGGT...ATCACCATCTTCAATTTCATTGTCACGGTGGTTGCTGCCTTCGTCTGCACTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555264.6
ENST00000580868.5
CDS-3UTR CAA 90 bp CAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAGACTTGATGATGAAGCACCATTCTGTGAAGATATATaGGCTTCCAAGGTAAGTGCA +
Preference number: 5 (lower is better)
Translates to: QLEPEAPKVFSRLDDEAPFCEDI*ASKVSA
Trigger: TGCACTTACCTTGGAAGCCAATATATCTTCACAGAA...TGGTGCTTCATCATCAAGTCTAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR CAA 90 bp AATGCTCCCTTTGGAAATTCACAGAAGATTAGGGCTCCCCACAGAAACAGCAGCAAGTCTTCTCTAGACTaGATGATGAAGCACCAGTTA +
Preference number: 5 (lower is better)
Translates to: NAPFGNSQKIRAPHRNSSKSSLD*MMKHQL
Trigger: TAACTGGTGCTTCATCATCAAGTCTAGAGAAGACTT...GCTGCTGTTTCTGTGGGGAGCCCTAATCTTCTGTGAATTTCCAAAGGGAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR CAA 90 bp ACCACCGTGACAATGAAATTGAAGATGGTGATGACCAGAGCCTTCAATGATCTCTCATGGAGGTATAGTTaGGAATCCCTTTCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: TTVTMKLKMVMTRAFNDLSWRYS*ESLSLR
Trigger: TCTGAGAGAAAGGGATTCCAAACTATACCTCCATGA...GAGATCATTGAAGGCTCTGGTCATCACCATCTTCAATTTCATTGTCACGGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555264.6
CDS-3UTR CAA 90 bp GTAAGTGCAGACGAAGGCAGCAACCACCGTGACAATGAAATTGAAGATGGTGATCGTTTATATTCCTCATaGGCCAGCTGTATCTTAATC +
Preference number: 5 (lower is better)
Translates to: VSADEGSNHRDNEIEDGDRLYSS*ASCILI
Trigger: GATTAAGATACAGCTGGCCAATGAGGAATATAAACG...ATCACCATCTTCAATTTCATTGTCACGGTGGTTGCTGCCTTCGTCTGCACTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555264.6
ENST00000580868.5
CDS-3UTR CAA 90 bp TGTTTTAAAGATGTGTTATCTCAATCTCCTCCAATGCTCCCTTTGGAAATTCACAAAAAGTCTGATGGGTaGACTGAGTCGGTGACTGCC +
Preference number: 5 (lower is better)
Translates to: CFKDVLSQSPPMLPLEIHKKSDG*TESVTA
Trigger: GGCAGTCACCGACTCAGTCAACCCATCAGACTTTTT...GTGAATTTCCAAAGGGAGCATTGGAGGAGATTGAGATAACACATCTTTAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CAA 90 bp GAAATCGCTATGCTTTGTGTTGTCACAGGAGTTAAAATAGGAATACCCTGCATAGCAGGTATAGCAGCATaGGGTTTTGGTATCACCATC +
Preference number: 5 (lower is better)
Translates to: EIAMLCVVTGVKIGIPCIAGIAA*GFGITI
Trigger: GATGGTGATACCAAAACCCAATGCTGCTATACCTGC...TATGCAGGGTATTCCTATTTTAACTCCTGTGACAACACAAAGCATAGCGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CAA 90 bp GTGTTATCTCAATCTCCTCCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGCGTTTATATTCCTCATaGGCCAGCTGTATCTTAATC +
Preference number: 5 (lower is better)
Translates to: VLSQSPPMLPLEIHRRLGRLYSS*ASCILI
Trigger: GATTAAGATACAGCTGGCCAATGAGGAATATAAACG...CCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGGAGGAGATTGAGATAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR CAA 90 bp GTGACAATGAAATTGAAGATGGTGATGACCAGAGCCTTCAATGATCTCACTCACTTCTGTGAAGATATATaGGCTTCCAAGGTAAGTGCA +
Preference number: 5 (lower is better)
Translates to: VTMKLKMVMTRAFNDLTHFCEDI*ASKVSA
Trigger: TGCACTTACCTTGGAAGCCAATATATCTTCACAGAA...GTGAGTGAGATCATTGAAGGCTCTGGTCATCACCATCTTCAATTTCATTGTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555264.6
CDS-3UTR CAA 90 bp GTGTTATCTCAATCTCCTCCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGAAGTCTTCTCTAGACTaGATGATGAAGCACCAGTTA +
Preference number: 5 (lower is better)
Translates to: VLSQSPPMLPLEIHRRLGKSSLD*MMKHQL
Trigger: TAACTGGTGCTTCATCATCAAGTCTAGAGAAGACTT...CCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGGAGGAGATTGAGATAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS-3UTR CAA 90 bp ATCAGTTTGTACATATGGACAAGTTCAAGGCAGTATGGTCTACTTCTGGGAAGGAAGCTGGTGATCAGTTaGTACATATGGACAAGTTCA +
Preference number: 5 (lower is better)
Translates to: ISLYIWTSSRQYGLLLGRKLVIS*YIWTSS
Trigger: TGAACTTGTCCATATGTACAAACTGATCACCAGCTT...CCTTCCCAGAAGTAGACCATACTGCCTTGAACTTGTCCATATGTACAAACTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS-3UTR CAA 90 bp GTGTTATCTCAATCTCCTCCAATGCTCCCTTTGGAAATTCACAGAAGATTAGGGTTCTTATGTGCTAGTTaGTCCTGTTCCTTCCCTTTA +
Preference number: 5 (lower is better)
Translates to: VLSQSPPMLPLEIHRRLGFLCAS*SCSFPL
Trigger: TAAAGGGAAGGAACAGGACAAACTAGCACATAAGAA...CCCTAATCTTCTGTGAATTTCCAAAGGGAGCATTGGAGGAGATTGAGATAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395404.7
CDS-3UTR CAA 90 bp GAAATCGCTATGCTTTGTGTTGTCACAGGAGTTAAAATAGGAATACCCTGCATACGTTTATATTCCTCATaGGCCAGCTGTATCTTAATC +
Preference number: 5 (lower is better)
Translates to: EIAMLCVVTGVKIGIPCIRLYSS*ASCILI
Trigger: GATTAAGATACAGCTGGCCAATGAGGAATATAAACG...TATGCAGGGTATTCCTATTTTAACTCCTGTGACAACACAAAGCATAGCGATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292114.8
CDS TCA 72 bp ACAGTTCTCCCAGCTCGCCTTCCATTGCCCGCACCATaGCATACAGCTCGGCCAGACCCACCACAGAGGCGA +
Preference number: 6 (lower is better)
Translates to: TVLPARLPLPAP*HTARPDPPQRR
Trigger: TCGCCTCTGTGGTGGGTCTGGCCGAGCTGTATGTCATGGTGCGGGCAATGGAAGGCGAGCTGGGAGAACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292114.8
ENST00000395404.7
ENST00000585027.1
CDS CCA 72 bp GCCGGGCAACTAGTTCTGGGTTCCCGGACTGGAGACTaGGGCTCACCCCTTTCTCTCAGATGCTGGTGCAGA +
Preference number: 6 (lower is better)
Translates to: AGQLVLGSRTGD*GSPLSLRCWCR
Trigger: TCTGCACCAGCATCTGAGAGAAAGGGGTGAGCCCCAGTCTCCAGTCCGGGAACCCAGAACTAGTTGCCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580868.5
CDS CAA 90 bp CAGATGCTGGTGCAGATCCCGGATGAGACGGAAAGAAACCAAGCGTaGGGGGCCACTGGAGCTATCACCGCCCTTGTGCTTCTTCCCCAG +
Preference number: 6 (lower is better)
Translates to: QMLVQIPDETERNQA*GATGAITALVLLPQ
Trigger: CTGGGGAAGAAGCACAAGGGCGGTGATAGCTCCAGTGGCCCCCAACGCTTGGTTTCTTTCCGTCTCATCCGGGATCTGCACCAGCATCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000292114.8
ENST00000483505.6
ENST00000555264.6
ENST00000579762.1
ENST00000580868.5
ENST00000581386.5
CDS TCA 72 bp CACCCCTTTCTCTCAGATGCTGGTGCAGATCCCGGATaGGACGGAAAGAAACCAAGCGTTGGGGGCCACTGG +
Preference number: 6 (lower is better)
Translates to: HPFLSDAGADPG*DGKKPSVGGHW
Trigger: CCAGTGGCCCCCAACGCTTGGTTTCTTTCCGTCTCATCCGGGATCTGCACCAGCATCTGAGAGAAAGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580868.5
CDS GCA 72 bp AAGCACCAGTTACAGTTCTCCCAGCTCGCCTTCCATTaGCCGCACCATGACATACAGCTCGGCCAGACCCAC +
Preference number: 6 (lower is better)
Translates to: KHQLQFSQLAFH*PHHDIQLGQTH
Trigger: GTGGGTCTGGCCGAGCTGTATGTCATGGTGCGGGCAATGGAAGGCGAGCTGGGAGAACTGTAACTGGTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292114.8
ENST00000395404.7
ENST00000585027.1
CDS GCA 72 bp CGGACTGGAGACTGGGGCTCACCCCTTTCTCTCAGATaGTGGTGCAGATCCCGGATGAGACGGAAAGAAACC +
Preference number: 6 (lower is better)
Translates to: RTGDWGSPLSLR*WCRSRMRRKET
Trigger: GGTTTCTTTCCGTCTCATCCGGGATCTGCACCAGCATCTGAGAGAAAGGGGTGAGCCCCAGTCTCCAGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580868.5
CDS CCA 72 bp TGCAGATCCCGGATGAGACGGAAAGAAACCAAGCGTTaGGGGCCACTGGAGCTATCACCGCCCTTGTGCTTC +
Preference number: 6 (lower is better)
Translates to: CRSRMRRKETKR*GPLELSPPLCF
Trigger: GAAGCACAAGGGCGGTGATAGCTCCAGTGGCCCCCAACGCTTGGTTTCTTTCCGTCTCATCCGGGATCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000292114.8
ENST00000483505.6
ENST00000555264.6
ENST00000579762.1
ENST00000580868.5
ENST00000581386.5
CDS CAA 72 bp GTGCAGATCCCGGATGAGACGGAAAGAAACCAAGCGTaGGGGGCCACTGGAGCTATCACCGCCCTTGTGCTT +
Preference number: 6 (lower is better)
Translates to: VQIPDETERNQA*GATGAITALVL
Trigger: AAGCACAAGGGCGGTGATAGCTCCAGTGGCCCCCAACGCTTGGTTTCTTTCCGTCTCATCCGGGATCTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000292114.8
ENST00000483505.6
ENST00000555264.6
ENST00000579762.1
ENST00000580868.5
ENST00000581386.5
CDS TCA 72 bp ATCCCCTTTCTCTCAGATGCTGGTGCAGATCCCGGATaGGACGGAAAGAAACCAAGCGTTGGGGGCCACTGG +
Preference number: 6 (lower is better)
Translates to: IPFLSDAGADPG*DGKKPSVGGHW
Trigger: CCAGTGGCCCCCAACGCTTGGTTTCTTTCCGTCTCATCCGGGATCTGCACCAGCATCTGAGAGAAAGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579762.1
CDS TCA 72 bp AATCCCTTTCTCTCAGATGCTGGTGCAGATCCCGGATaGGACGGAAAGAAACCAAGCGTTGGGGGCCACTGG +
Preference number: 6 (lower is better)
Translates to: NPFLSDAGADPG*DGKKPSVGGHW
Trigger: CCAGTGGCCCCCAACGCTTGGTTTCTTTCCGTCTCATCCGGGATCTGCACCAGCATCTGAGAGAAAGGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292114.8
ENST00000483505.6
ENST00000555264.6
ENST00000581386.5
CDS CCA 72 bp ACTGGAGACTGGGGCTCACCCCTTTCTCTCAGATGCTaGTGCAGATCCCGGATGAGACGGAAAGAAACCAAG +
Preference number: 6 (lower is better)
Translates to: TGDWGSPLSLRC*CRSRMRRKETK
Trigger: CTTGGTTTCTTTCCGTCTCATCCGGGATCTGCACCAGCATCTGAGAGAAAGGGGTGAGCCCCAGTCTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580868.5
CDS CAA 90 bp CCCTGCCCAGTGCCTACTCACCGAGGCCATTTCTGTGAAGATATATaGGCTTCCAAGGTAAGTGCAGACGAAGGCAGCAACCACCGTGAC +
Preference number: 6 (lower is better)
Translates to: PCPVPTHRGHFCEDI*ASKVSADEGSNHRD
Trigger: GTCACGGTGGTTGCTGCCTTCGTCTGCACTTACCTTGGAAGCCAATATATCTTCACAGAAATGGCCTCGGTGAGTAGGCACTGGGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509083.2
CDS GCA 72 bp ACTACAGAGCAGGCATTTCGGAGAGAGGACATAGGCTaGCAGTACCCATCTACTCTCCTGTTCCAGGGTAGG +
Preference number: 6 (lower is better)
Translates to: TTEQAFRREDIG*QYPSTLLFQGR
Trigger: CCTACCCTGGAACAGGAGAGTAGATGGGTACTGGCAGCCTATGTCCTCTCTCCGAAATGCCTGCTCTGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585027.1
CDS TCA 72 bp GCCCTGCCCAGTGCCTACTCACCGAGGCCATTTCTGTaGAGATATATTGGCTTCCAAGGTAAGTGCAGACGA +
Preference number: 6 (lower is better)
Translates to: ALPSAYSPRPFL*RYIGFQGKCRR
Trigger: TCGTCTGCACTTACCTTGGAAGCCAATATATCTTCACAGAAATGGCCTCGGTGAGTAGGCACTGGGCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509083.2
CDS CAA 90 bp GTGACTGCCAATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAGACTaGATGATGAAGCACCAGTTACAGTTCTCCCAGCTCGCCTTCCAT +
Preference number: 6 (lower is better)
Translates to: VTANWSLKPPKSSLD*MMKHQLQFSQLAFH
Trigger: ATGGAAGGCGAGCTGGGAGAACTGTAACTGGTGCTTCATCATCAAGTCTAGAGAAGACTTTGGGGGCTTCAGGCTCCAATTGGCAGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS CCA 72 bp CAACACAGCTTTTGCCATCCCCTTTCTCTCAGATGCTaGTGCAGATCCCGGATGAGACGGAAAGAAACCAAG +
Preference number: 6 (lower is better)
Translates to: QHSFCHPLSLRC*CRSRMRRKETK
Trigger: CTTGGTTTCTTTCCGTCTCATCCGGGATCTGCACCAGCATCTGAGAGAAAGGGGATGGCAAAAGCTGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579762.1
CDS TCA 72 bp GAGCCTTCAATGATCTCACTTGCTTTCCCAGGTCGCTaGGAGTCCCACCATGTCTTGTATCCTGGGAAAAAG +
Preference number: 6 (lower is better)
Translates to: EPSMISLAFPGR*ESHHVLYPGKK
Trigger: CTTTTTCCCAGGATACAAGACATGGTGGGACTCTCAGCGACCTGGGAAAGCAAGTGAGATCATTGAAGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585027.1
CDS GCA 72 bp AGAGAGGGCACCTTTAGTTCAACATTCTCTAGGAGGTaGTCTTATCTCATGGCTCCCCCACCAACTGGGTTT +
Preference number: 6 (lower is better)
Translates to: REGTFSSTFSRR*SYLMAPPPTGF
Trigger: AAACCCAGTTGGTGGGGGAGCCATGAGATAAGAGCACCTCCTAGAGAATGTTGAACTAAAGGTGCCCTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483505.6
CDS GCA 72 bp GGCTTCTCCTGGGGTTATTACCTAACCTCCCGTGACTaGTGGAAAGCTCTAATGCTCCCCTTATTAATGGCA +
Preference number: 6 (lower is better)
Translates to: GFSWGYYLTSRD*WKALMLPLLMA
Trigger: TGCCATTAATAAGGGGAGCATTAGAGCTTTCCAGCAGTCACGGGAGGTTAGGTAATAACCCCAGGAGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509083.2
CDS GCA 72 bp TTTCAACACAGCTTTTGCCATCCCCTTTCTCTCAGATaGTGGTGCAGATCCCGGATGAGACGGAAAGAAACC +
Preference number: 6 (lower is better)
Translates to: FQHSFCHPLSLR*WCRSRMRRKET
Trigger: GGTTTCTTTCCGTCTCATCCGGGATCTGCACCAGCATCTGAGAGAAAGGGGATGGCAAAAGCTGTGTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579762.1
CDS GCA 72 bp AGTACCCATCTACTCTCCTGTTCCAGGGTAGGAGCATaGCATAGAGTAGTAGGGAGCCCTGTCAGAAGAAAT +
Preference number: 6 (lower is better)
Translates to: STHLLSCSRVGA*HRVVGSPVRRN
Trigger: ATTTCTTCTGACAGGGCTCCCTACTACTCTATGGCATGCTCCTACCCTGGAACAGGAGAGTAGATGGGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585027.1
CDS CAA 72 bp CAAGTGACGTTGCGGGTGATCCGTTTATATTCCTCATaGGCCAGCTGTATCTTAATCTTCTCCAGCCGGGCA +
Preference number: 6 (lower is better)
Translates to: QVTLRVIRLYSS*ASCILIFSSRA
Trigger: TGCCCGGCTGGAGAAGATTAAGATACAGCTGGCCAATGAGGAATATAAACGGATCACCCGCAACGTCACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292114.8
ENST00000395404.7
ENST00000483505.6
ENST00000509083.2
ENST00000555264.6
ENST00000580868.5
ENST00000581386.5
CDS CAA 72 bp GTGCCTACTCACCGAGGCCATTTCTGTGAAGATATATaGGCTTCCAAGGTAAGTGCAGACGAAGGCAGCAAC +
Preference number: 6 (lower is better)
Translates to: VPTHRGHFCEDI*ASKVSADEGSN
Trigger: GTTGCTGCCTTCGTCTGCACTTACCTTGGAAGCCAATATATCTTCACAGAAATGGCCTCGGTGAGTAGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509083.2
CDS CCA 72 bp TGGAGGTATAGTTTGGAATCCCTTTCTCTCAGATGCTaGTGCAGATCCCGGATGAGACGGAAAGAAACCAAG +
Preference number: 6 (lower is better)
Translates to: WRYSLESLSLRC*CRSRMRRKETK
Trigger: CTTGGTTTCTTTCCGTCTCATCCGGGATCTGCACCAGCATCTGAGAGAAAGGGATTCCAAACTATACCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292114.8
ENST00000483505.6
ENST00000555264.6
ENST00000581386.5
CDS CAA 72 bp AATTGGAGCCTGAAGCCCCCAAAGTCTTCTCTAGACTaGATGATGAAGCACCAGTTACAGTTCTCCCAGCTC +
Preference number: 6 (lower is better)
Translates to: NWSLKPPKSSLD*MMKHQLQFSQL
Trigger: GAGCTGGGAGAACTGTAACTGGTGCTTCATCATCAAGTCTAGAGAAGACTTTGGGGGCTTCAGGCTCCAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292114.8
ENST00000395404.7
CDS CAA 72 bp CAGCCCAGAGTCTCAGTGAATGAGATGGGAACTGTGTaGTTTGTATGCAGACTTCCTATGGTCCCTGACAAG +
Preference number: 6 (lower is better)
Translates to: QPRVSVNEMGTV*FVCRLPMVPDK
Trigger: CTTGTCAGGGACCATAGGAAGTCTGCATACAAACAACACAGTTCCCATCTCATTCACTGAGACTCTGGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581386.5
CDS TCA 72 bp ATGTGGCTTCTCCTGGGGTTATTACCTAACCTCCCGTaGCTGCTGGAAAGCTCTAATGCTCCCCTTATTAAT +
Preference number: 6 (lower is better)
Translates to: MWLLLGLLPNLP*LLESSNAPLIN
Trigger: ATTAATAAGGGGAGCATTAGAGCTTTCCAGCAGTCACGGGAGGTTAGGTAATAACCCCAGGAGAAGCCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509083.2
CDS GCA 72 bp GTGGAGGCTTCACAACCTCTGGGAGATAGATTTCACTaGCTTCTAGGAGCTCATGGAGGTATAGTTTGGAAT +
Preference number: 6 (lower is better)
Translates to: VEASQPLGDRFH*LLGAHGGIVWN
Trigger: ATTCCAAACTATACCTCCATGAGCTCCTAGAAGGCAGTGAAATCTATCTCCCAGAGGTTGTGAAGCCTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292114.8
ENST00000483505.6
ENST00000555264.6
ENST00000581386.5
CDS GCA 72 bp AAAGGATTAGTGACAGAGCTAGGACTGGAACTCACATaGTACTCTCAGGCCAGATCTTTCAACACAGCTTTT +
Preference number: 6 (lower is better)
Translates to: KGLVTELGLELT*YSQARSFNTAF
Trigger: AAAAGCTGTGTTGAAAGATCTGGCCTGAGAGTAGCATGTGAGTTCCAGTCCTAGCTCTGTCACTAATCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395404.7
ENST00000579762.1
CDS CCA 72 bp ACAAAGTATCAGATTTCACCACTCTTGCTTTTGAGGTaGAAAGAAATCCGGATTCCTACAAGCTCACTATGC +
Preference number: 6 (lower is better)
Translates to: TKYQISPLLLLR*KEIRIPTSSLC
Trigger: GCATAGTGAGCTTGTAGGAATCCGGATTTCTTTCCACCTCAAAAGCAAGAGTGGTGAAATCTGATACTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395404.7