RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM192 (Homo sapiens)

Ensembl gene IDs: ENSG00000170088

Ensembl transcript IDs: ENST00000306480.11, ENST00000505095.1, ENST00000506087.5

Found 277 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCAAGAGACCGGCGCCGGTGCAGGTCCTCGCATGCTGGGTGTGCTaGTCCCCTGGGCCCACTGTTCTTTCTTTATACTTTGTCTCTGTG +
Preference number: 1 (lower is better)
Translates to: LKRPAPVQVLACWVC*SPGPTVLSLYFVSV
Trigger: CACAGAGACAAAGTATAAAGAAAGAACAGTGGGCCCAGGGGACCAGCACACCCAGCATGCGAGGACCTGCACCGGCGCCGGTCTCTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR GCA 90 bp GAACTCAAGAGACCGGCGCCGGTGCAGGTCCTCGCATGCTGGGTGTaGTGGTCCCCTGGGCCCACTGTTCTTTCTTTATACTTTGTCTCT +
Preference number: 1 (lower is better)
Translates to: ELKRPAPVQVLACWV*WSPGPTVLSLYFVS
Trigger: AGAGACAAAGTATAAAGAAAGAACAGTGGGCCCAGGGGACCAGCACACCCAGCATGCGAGGACCTGCACCGGCGCCGGTCTCTTGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR GCA 90 bp ATACTAACAGAACTCAAGAGACCGGCGCCGGTGCAGGTCCTCGCATaGTGGGTGTGCTGGTCCCCTGGGCCCACTGTTCTTTCTTTATAC +
Preference number: 1 (lower is better)
Translates to: ILTELKRPAPVQVLA*WVCWSPGPTVLSLY
Trigger: GTATAAAGAAAGAACAGTGGGCCCAGGGGACCAGCACACCCAGCATGCGAGGACCTGCACCGGCGCCGGTCTCTTGAGTTCTGTTAGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR TCA 90 bp CCTCTGCCCAAGAAAGCCTGGGTATTGTCCAAGGTTTCCTCCCACTaGGACAGCCTGAGATACGGCCTCGTGGGAAAGGAAAGGCCTTAC +
Preference number: 1 (lower is better)
Translates to: PLPKKAWVLSKVSSH*DSLRYGLVGKERPY
Trigger: GTAAGGCCTTTCCTTTCCCACGAGGCCGTATCTCAGGCTGTCTCAGTGGGAGGAAACCTTGGACAATACCCAGGCTTTCTTGGGCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CCA 90 bp ACCGGCGCCGGTGCAGGTCCTCGCATGCTGGGTGTGCTGGTCCCCTaGGCCCACTGTTCTTTCTTTATACTTTGTCTCTGTGTCTTATTT +
Preference number: 1 (lower is better)
Translates to: TGAGAGPRMLGVLVP*AHCSFFILCLCVLF
Trigger: AAATAAGACACAGAGACAAAGTATAAAGAAAGAACAGTGGGCCCAGGGGACCAGCACACCCAGCATGCGAGGACCTGCACCGGCGCCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR TCA 90 bp ACCAAGAGAGTGAACGCTGATGGAGAAGCCAAGAGGCCCAGGGGTTaGGCCCTGGAGAATACCAACAAAAAGCAACTTGCAAAGCAGACA +
Preference number: 1 (lower is better)
Translates to: TKRVNADGEAKRPRG*ALENTNKKQLAKQT
Trigger: TGTCTGCTTTGCAAGTTGCTTTTTGTTGGTATTCTCCAGGGCTCAACCCCTGGGCCTCTTGGCTTCTCCATCAGCGTTCACTCTCTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR GCA 90 bp AAAGCTGACCATTCCCATTCGTTCTATTCTGAGATAGGAGAAAACTaGCCTGTGGCTGGAGGCGAGATATGCTGGCAGCAATACTGCTCT +
Preference number: 1 (lower is better)
Translates to: KADHSHSFYSEIGEN*PVAGGEICWQQYCS
Trigger: AGAGCAGTATTGCTGCCAGCATATCTCGCCTCCAGCCACAGGGCAGTTTTCTCCTATCTCAGAATAGAACGAATGGGAATGGTCAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR GCA 90 bp GGCTGTGCAGGATGTGCCTTGTTAACAATATGTTTGCAGGTGGTATaGTTGGTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGG +
Preference number: 1 (lower is better)
Translates to: GCAGCALLTICLQVV*LVKVIAFLHSRLTR
Trigger: CCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTACCAAGCATACCACCTGCAAACATATTGTTAACAAGGCACATCCTGCACAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CCA 90 bp AAACCGAAAGACTATTATAATAGTCCAGGTGAAGATTATAGTGGCTaGGGAAGTAGCATTGGGGGTGCCAAGAATTGGTTGGACTCTGGG +
Preference number: 1 (lower is better)
Translates to: KPKDYYNSPGEDYSG*GSSIGGAKNWLDSG
Trigger: CCCAGAGTCCAACCAATTCTTGGCACCCCCAATGCTACTTCCCCAGCCACTATAATCTTCACCTGGACTATTATAATAGTCTTTCGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CCA 90 bp ATAACTTTAGCCCCAACCCTGTGCTCACAGAAACATGTGCTGTATTaGATCAGTTTAATGGATTTAGGGCTGTGCAGGATGTGCCTTGTT +
Preference number: 1 (lower is better)
Translates to: ITLAPTLCSQKHVLY*ISLMDLGLCRMCLV
Trigger: AACAAGGCACATCCTGCACAGCCCTAAATCCATTAAACTGATCCAATACAGCACATGTTTCTGTGAGCACAGGGTTGGGGCTAAAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR TCA 90 bp CGAGATATGCTGGCAGCAATACTGCTCTGTTACTCTTTGCTACACTaGAATGTTTGTGTAAAGAGAAACGTAAATCTAGCCTACATGCAC +
Preference number: 1 (lower is better)
Translates to: RDMLAAILLCYSLLH*NVCVKRNVNLAYMH
Trigger: GTGCATGTAGGCTAGATTTACGTTTCTCTTTACACAAACATTTCAGTGTAGCAAAGAGTAACAGAGCAGTATTGCTGCCAGCATATCTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR GCA 90 bp GTGCTGTATTGGATCAGTTTAATGGATTTAGGGCTGTGCAGGATGTaGCTTGTTAACAATATGTTTGCAGGTGGTATGCTTGGTAAAAGT +
Preference number: 1 (lower is better)
Translates to: VLYWISLMDLGLCRM*LVNNMFAGGMLGKS
Trigger: ACTTTTACCAAGCATACCACCTGCAAACATATTGTTAACAAGGCACATCCTGCACAGCCCTAAATCCATTAAACTGATCCAATACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR GCA 90 bp CAGAAACATGTGCTGTATTGGATCAGTTTAATGGATTTAGGGCTGTaGAGGATGTGCCTTGTTAACAATATGTTTGCAGGTGGTATGCTT +
Preference number: 1 (lower is better)
Translates to: QKHVLYWISLMDLGL*RMCLVNNMFAGGML
Trigger: AAGCATACCACCTGCAAACATATTGTTAACAAGGCACATCCTGCACAGCCCTAAATCCATTAAACTGATCCAATACAGCACATGTTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR TCA 90 bp AGGAATTTGCATAGTAGATCACCTGGTGAGACCTCAGTCCTATGGTaGGAAAAATTCTCTATAAAAGCTATATGGTCCATGATGTCATCC +
Preference number: 1 (lower is better)
Translates to: RNLHSRSPGETSVLW*EKFSIKAIWSMMSS
Trigger: GGATGACATCATGGACCATATAGCTTTTATAGAGAATTTTTCTCACCATAGGACTGAGGTCTCACCAGGTGATCTACTATGCAAATTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
3UTR-3UTR CCA 90 bp TACCTCTCCACCCAGGTCCTGCCTCACACTTTTGGTTCCAGCTATACACAGTGCAGCCTCCCAGGTGGCTaGGACTACAGGTGCCCGCCA +
Preference number: 2 (lower is better)
Translates to: YLSTQVLPHTFGSSYTQCSLPGG*DYRCPP
Trigger: TGGCGGGCACCTGTAGTCCCAGCCACCTGGGAGGCT...GCACTGTGTATAGCTGGAACCAAAAGTGTGAGGCAGGACCTGGGTGGAGAGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR GCA 90 bp TGCGGAAAGCCGCAGGGACCTCTGCCCAAGAAAGCCTGGGTATTGTCCAAGGTTCCCAGATCACACCACTaGACTCCAGCCTGGGAGACA +
Preference number: 2 (lower is better)
Translates to: CGKPQGPLPKKAWVLSKVPRSHH*TPAWET
Trigger: TGTCTCCCAGGCTGGAGTGCAGTGGTGTGATCTGGG...AACCTTGGACAATACCCAGGCTTTCTTGGGCAGAGGTCCCTGCGGCTTTCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CAA 90 bp CTCCTGCCCCCAGGGTACCCCCTGACGTGGAGCTCCTACAGCATGTaGGGCCTACTGTCATTACTGCACTTAGCACAGAGTCTGGAAATC +
Preference number: 2 (lower is better)
Translates to: LLPPGYPLTWSSYSM*GLLSLLHLAQSLEI
Trigger: GATTTCCAGACTCTGTGCTAAGTGCAGTAATGACAGTAGGCCCAACATGCTGTAGGAGCTCCACGTCAGGGGGTACCCTGGGGGCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR TCA 90 bp TGCGGAAAGCCGCAGGGACCTCTGCCCAAGAAAGCCTGGGTATTGTCCAAGGTTGCCTGGCCAACATGGTaGATCCCCGTCTCTACTAGA +
Preference number: 2 (lower is better)
Translates to: CGKPQGPLPKKAWVLSKVAWPTW*IPVSTR
Trigger: TCTAGTAGAGACGGGGATTCACCATGTTGGCCAGGC...AACCTTGGACAATACCCAGGCTTTCTTGGGCAGAGGTCCCTGCGGCTTTCCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR CCA 90 bp GCCATTACAGGGGTGGAAGAGACTGTGGCAGATAGCTCAGCTGGGGACATGTTCAGCTGCAGTTCCCCGTaGCAGCTTGTCAGGTGGTCA +
Preference number: 2 (lower is better)
Translates to: AITGVEETVADSSAGDMFSCSSP*QLVRWS
Trigger: TGACCACCTGACAAGCTGCCACGGGGAACTGCAGCT...GAACATGTCCCCAGCTGAGCTATCTGCCACAGTCTCTTCCACCCCTGTAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR TCA 90 bp GCCATTACAGGGGTGGAAGAGACTGTGGCAGATAGCTCAGCTGGGGACATGTTCCTGGTCTCTAACTCCTaGCCTTGTGATCCACCCACC +
Preference number: 2 (lower is better)
Translates to: AITGVEETVADSSAGDMFLVSNS*PCDPPT
Trigger: GGTGGGTGGATCACAAGGTCAGGAGTTAGAGACCAG...GAACATGTCCCCAGCTGAGCTATCTGCCACAGTCTCTTCCACCCCTGTAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR GCA 90 bp TCGCATGCTGGGTGTGCTGGTCCCCTGGGCCCACTGTTCTTTCTTTATACTTTGCCGAGATCATGCTACTaGGCTCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: SHAGCAGPLGPLFFLYTLPRSCY*APAWAT
Trigger: TGTTGCCCAGGCTGGAGCGCAGTAGCATGATCTCGG...CAAAGTATAAAGAAAGAACAGTGGGCCCAGGGGACCAGCACACCCAGCATGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR GCA 90 bp GCCATTACAGGGGTGGAAGAGACTGTGGCAGATAGCTCAGCTGGGGACATGTTCAGCTGGGATTACAGGTaGACTTCACTGCACCTGGCT +
Preference number: 2 (lower is better)
Translates to: AITGVEETVADSSAGDMFSWDYR*TSLHLA
Trigger: AGCCAGGTGCAGTGAAGTGCACCTGTAATCCCAGCT...GAACATGTCCCCAGCTGAGCTATCTGCCACAGTCTCTTCCACCCCTGTAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR CCA 90 bp TGCGGAAAGCCGCAGGGACCTCTGCCCAAGAAAGCCTGGGTATTGTCCAAGGTTTGGCAGCTTGTCAGGTaGTCAGTCAGTCTCAATTAC +
Preference number: 2 (lower is better)
Translates to: CGKPQGPLPKKAWVLSKVWQLVR*SVSLNY
Trigger: GTAATTGAGACTGACTGACCACCTGACAAGCTGCCA...AACCTTGGACAATACCCAGGCTTTCTTGGGCAGAGGTCCCTGCGGCTTTCCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR CCA 90 bp GTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGGGACACAATGCACTGCGCAAGCTCCGCCTCCTaGGTCCACACCATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: VKVIAFLHSRLTRDTMHCASSAS*VHTILL
Trigger: CAGGAGAATGGTGTGGACCCAGGAGGCGGAGCTTGC...GCAGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR GCA 90 bp TGCGGAAAGCCGCAGGGACCTCTGCCCAAGAAAGCCTGGGTATTGTCCAAGGTTAGGGCCATATCTTTCTaGCACACATATTTCCTCCAT +
Preference number: 2 (lower is better)
Translates to: CGKPQGPLPKKAWVLSKVRAISF*HTYFLH
Trigger: ATGGAGGAAATATGTGTGGCAGAAAGATATGGCCCT...AACCTTGGACAATACCCAGGCTTTCTTGGGCAGAGGTCCCTGCGGCTTTCCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR GCA 90 bp GTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGGGACACAATGCACTGCAGCCGCAGGGACCTCTaGCCAAGAAAGCCTGGGTAT +
Preference number: 2 (lower is better)
Translates to: VKVIAFLHSRLTRDTMHCSRRDL*PRKPGY
Trigger: ATACCCAGGCTTTCTTGGGCAGAGGTCCCTGCGGCT...GCAGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR CCA 90 bp GCCATTACAGGGGTGGAAGAGACTGTGGCAGATAGCTCAGCTGGGGACATGTTCGGAAGTGATCAACTGTaGGGAAAAGAGAGAGATCAG +
Preference number: 2 (lower is better)
Translates to: AITGVEETVADSSAGDMFGSDQL*GKERDQ
Trigger: CTGATCTCTCTCTTTTCCCCACAGTTGATCACTTCC...GAACATGTCCCCAGCTGAGCTATCTGCCACAGTCTCTTCCACCCCTGTAATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR CCA 90 bp GCCATTACAGGGGTGGAAGAGACTGTGGCAGATAGCTCAGCTGGGGACATGTTCTCTAGAAGGGGCAGTTaGACACATAAGTCTGGAGTT +
Preference number: 2 (lower is better)
Translates to: AITGVEETVADSSAGDMFSRRGS*THKSGV
Trigger: AACTCCAGACTTATGTGTCCAACTGCCCCTTCTAGA...GAACATGTCCCCAGCTGAGCTATCTGCCACAGTCTCTTCCACCCCTGTAATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CAA 90 bp GCTGGGTGTGCTGGTCCCCTGGGCCCACTGTTCTTTCTTTATACTTaGTCTCTGTGTCTTATTTCTTTTCTCAGTCTCTCGTCCCACCTG +
Preference number: 2 (lower is better)
Translates to: AGCAGPLGPLFFLYT*SLCLISFLSLSSHL
Trigger: CAGGTGGGACGAGAGACTGAGAAAAGAAATAAGACACAGAGACAAAGTATAAAGAAAGAACAGTGGGCCCAGGGGACCAGCACACCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR TCA 90 bp GTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGGGACACAATGCACTGCAGAAGGAGGTTGCAGTaGGCCCAGATCACACCACTG +
Preference number: 2 (lower is better)
Translates to: VKVIAFLHSRLTRDTMHCRRRLQ*AQITPL
Trigger: CAGTGGTGTGATCTGGGCTCACTGCAACCTCCTTCT...GCAGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR TCA 90 bp GCCATTACAGGGGTGGAAGAGACTGTGGCAGATAGCTCAGCTGGGGACATGTTCAGTAGAGTAGTAGAGTaGAAGGTGAGACTGGATAGA +
Preference number: 2 (lower is better)
Translates to: AITGVEETVADSSAGDMFSRVVE*KVRLDR
Trigger: TCTATCCAGTCTCACCTTTCACTCTACTACTCTACT...GAACATGTCCCCAGCTGAGCTATCTGCCACAGTCTCTTCCACCCCTGTAATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR GCA 90 bp GTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGGGACACAATGCACTGCAAAGAAAGGCGCCATTaGACTCCAGCCTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: VKVIAFLHSRLTRDTMHCKERRH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAATGGCGCCTTTCTTT...GCAGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR GCA 90 bp GTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGGGACACAATGCACTGCCTCGGCCTCCCAAAGTaGTGGAATTACCGGTGTGAG +
Preference number: 2 (lower is better)
Translates to: VKVIAFLHSRLTRDTMHCLGLPK*WNYRCE
Trigger: CTCACACCGGTAATTCCAGCACTTTGGGAGGCCGAG...GCAGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR CCA 90 bp TCCCCTCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCTGGCAGCTTGTCAGGTaGTCAGTCAGTCTCAATTAC +
Preference number: 2 (lower is better)
Translates to: SPQVIRASTGTFQVTHKPWQLVR*SVSLNY
Trigger: GTAATTGAGACTGACTGACCACCTGACAAGCTGCCA...GGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
3UTR-3UTR TCA 90 bp TACCTCTCCACCCAGGTCCTGCCTCACACTTTTGGTTCCAGCTATACACAGTGCGTGCTAACAGCAAACTaGCAAATTAAAGGGGCATAC +
Preference number: 2 (lower is better)
Translates to: YLSTQVLPHTFGSSYTQCVLTAN*QIKGAY
Trigger: GTATGCCCCTTTAATTTGTCAGTTTGCTGTTAGCAC...GCACTGTGTATAGCTGGAACCAAAAGTGTGAGGCAGGACCTGGGTGGAGAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR GCA 90 bp CAATTTCCTGACCTCATGATCCGCCGTGCCCAGCCCTTATTTCTTAAGAATAGAGGGTTCCTCTGCAATTaGTGTCATGACCGTGAGCCT +
Preference number: 2 (lower is better)
Translates to: QFPDLMIRRAQPLFLKNRGFLCN*CHDREP
Trigger: AGGCTCACGGTCATGACAGCAATTGCAGAGGAACCC...TCTATTCTTAAGAAATAAGGGCTGGGCACGGCGGATCATGAGGTCAGGAAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
3UTR-3UTR GCA 90 bp TACCTCTCCACCCAGGTCCTGCCTCACACTTTTGGTTCCAGCTATACACAGTGCGCTAATGGAAGGTGCTaGCAATATAATAGGCAACAC +
Preference number: 2 (lower is better)
Translates to: YLSTQVLPHTFGSSYTQCANGRC*QYNRQH
Trigger: GTGTTGCCTATTATATTGGCAGCACCTTCCATTAGC...GCACTGTGTATAGCTGGAACCAAAAGTGTGAGGCAGGACCTGGGTGGAGAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR CCA 90 bp GCCATTACAGGGGTGGAAGAGACTGTGGCAGATAGCTCAGCTGGGGACATGTTCGGTTCTAATGTCAGGTaGAAAAGTGTTGACTATGGA +
Preference number: 2 (lower is better)
Translates to: AITGVEETVADSSAGDMFGSNVR*KSVDYG
Trigger: TCCATAGTCAACACTTTTCCACCTGACATTAGAACC...GAACATGTCCCCAGCTGAGCTATCTGCCACAGTCTCTTCCACCCCTGTAATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR CCA 90 bp TTTTCAAGTGACCCACAAGCCCTATATTTTAAACAGCCACAGAAGTCAGAACCAAGCTGCAGTTCCCCGTaGCAGCTTGTCAGGTGGTCA +
Preference number: 2 (lower is better)
Translates to: FSSDPQALYFKQPQKSEPSCSSP*QLVRWS
Trigger: TGACCACCTGACAAGCTGCCACGGGGAACTGCAGCT...TGGTTCTGACTTCTGTGGCTGTTTAAAATATAGGGCTTGTGGGTCACTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
3UTR-3UTR GCA 90 bp TACCTCTCCACCCAGGTCCTGCCTCACACTTTTGGTTCCAGCTATACACAGTGCAAAACTGTAGGAATTTaGATAGTAGATCACCTGGTG +
Preference number: 2 (lower is better)
Translates to: YLSTQVLPHTFGSSYTQCKTVGI*IVDHLV
Trigger: CACCAGGTGATCTACTATGCAAATTCCTACAGTTTT...GCACTGTGTATAGCTGGAACCAAAAGTGTGAGGCAGGACCTGGGTGGAGAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR CCA 90 bp TCGCATGCTGGGTGTGCTGGTCCCCTGGGCCCACTGTTCTTTCTTTATACTTTGTCTATAAAAGCTATATaGTCCATGATGTCATCCAAC +
Preference number: 2 (lower is better)
Translates to: SHAGCAGPLGPLFFLYTLSIKAI*SMMSSN
Trigger: GTTGGATGACATCATGGACCATATAGCTTTTATAGA...CAAAGTATAAAGAAAGAACAGTGGGCCCAGGGGACCAGCACACCCAGCATGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CAA 90 bp TGTGCAGGATGTGCCTTGTTAACAATATGTTTGCAGGTGGTATGCTaGGTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGGGAC +
Preference number: 2 (lower is better)
Translates to: CAGCALLTICLQVVC*VKVIAFLHSRLTRD
Trigger: GTCCCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTACCAAGCATACCACCTGCAAACATATTGTTAACAAGGCACATCCTGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CAA 90 bp TATAACTTTAGCCCCAACCCTGTGCTCACAGAAACATGTGCTGTATaGGATCAGTTTAATGGATTTAGGGCTGTGCAGGATGTGCCTTGT +
Preference number: 2 (lower is better)
Translates to: YNFSPNPVLTETCAV*DQFNGFRAVQDVPC
Trigger: ACAAGGCACATCCTGCACAGCCCTAAATCCATTAAACTGATCCAATACAGCACATGTTTCTGTGAGCACAGGGTTGGGGCTAAAGTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR GCA 90 bp AGGATGTGCCTTGTTAACAATATGTTTGCAGGTGGTATGCTTGGTAAAAGTCATGGGTTCCTCTGCAATTaGTGTCATGACCGTGAGCCT +
Preference number: 2 (lower is better)
Translates to: RMCLVNNMFAGGMLGKSHGFLCN*CHDREP
Trigger: AGGCTCACGGTCATGACAGCAATTGCAGAGGAACCC...ATGACTTTTACCAAGCATACCACCTGCAAACATATTGTTAACAAGGCACATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR GCA 90 bp GTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGGGACACAATGCACTGCATTGCTAATGGAAGGTaGTGCCAATATAATAGGCAA +
Preference number: 2 (lower is better)
Translates to: VKVIAFLHSRLTRDTMHCIANGR*CQYNRQ
Trigger: TTGCCTATTATATTGGCAGCACCTTCCATTAGCAAT...GCAGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR GCA 90 bp AGGATGTGCCTTGTTAACAATATGTTTGCAGGTGGTATGCTTGGTAAAAGTCATTTGCCCAAGCTGGAATaGAGTGGTGCAATTTCAGCT +
Preference number: 2 (lower is better)
Translates to: RMCLVNNMFAGGMLGKSHLPKLE*SGAISA
Trigger: AGCTGAAATTGCACCACTGCATTCCAGCTTGGGCAA...ATGACTTTTACCAAGCATACCACCTGCAAACATATTGTTAACAAGGCACATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR CCA 90 bp AGGATGTGCCTTGTTAACAATATGTTTGCAGGTGGTATGCTTGGTAAAAGTCATCAAGCTGGAATGCAGTaGTGCAATTTCAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: RMCLVNNMFAGGMLGKSHQAGMQ*CNFSSL
Trigger: CAGTGAGCTGAAATTGCACCACTGCATTCCAGCTTG...ATGACTTTTACCAAGCATACCACCTGCAAACATATTGTTAACAAGGCACATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CAA 90 bp CCTAGTTCAGGGCCATATCTTTCTGCCACACATATTTCCTCCATATaGAACTACCATCTGATCCTGCTGAAACTAAAACTGACATTGTCA +
Preference number: 2 (lower is better)
Translates to: PSSGPYLSATHISSI*NYHLILLKLKLTLS
Trigger: TGACAATGTCAGTTTTAGTTTCAGCAGGATCAGATGGTAGTTCAATATGGAGGAAATATGTGTGGCAGAAAGATATGGCCCTGAACTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR TCA 90 bp AGGATGTGCCTTGTTAACAATATGTTTGCAGGTGGTATGCTTGGTAAAAGTCATCAGGTGGAAAAGTGTTaGCTATGGAGTTGTTTAGCC +
Preference number: 2 (lower is better)
Translates to: RMCLVNNMFAGGMLGKSHQVEKC*LWSCLA
Trigger: GGCTAAACAACTCCATAGTCAACACTTTTCCACCTG...ATGACTTTTACCAAGCATACCACCTGCAAACATATTGTTAACAAGGCACATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR GCA 90 bp AGGATGTGCCTTGTTAACAATATGTTTGCAGGTGGTATGCTTGGTAAAAGTCATAAGGTTTACTATACCTaGCCTAGTTCAGGGCCATAT +
Preference number: 2 (lower is better)
Translates to: RMCLVNNMFAGGMLGKSHKVYYT*PSSGPY
Trigger: ATATGGCCCTGAACTAGGGCAGGTATAGTAAACCTT...ATGACTTTTACCAAGCATACCACCTGCAAACATATTGTTAACAAGGCACATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CAA 90 bp TCCATATTGAACTACCATCTGATCCTGCTGAAACTAAAACTGACATaGTCACTTCCTTGCTTGAAATGCTTCAGAGGATCCCATTATCAA +
Preference number: 2 (lower is better)
Translates to: SILNYHLILLKLKLT*SLPCLKCFRGSHYQ
Trigger: TTGATAATGGGATCCTCTGAAGCATTTCAAGCAAGGAAGTGACAATGTCAGTTTTAGTTTCAGCAGGATCAGATGGTAGTTCAATATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR GCA 90 bp AGGATGTGCCTTGTTAACAATATGTTTGCAGGTGGTATGCTTGGTAAAAGTCATCTTCCTTGCTTGAAATaGTTCAGAGGATCCCATTAT +
Preference number: 2 (lower is better)
Translates to: RMCLVNNMFAGGMLGKSHLPCLK*FRGSHY
Trigger: ATAATGGGATCCTCTGAAGCATTTCAAGCAAGGAAG...ATGACTTTTACCAAGCATACCACCTGCAAACATATTGTTAACAAGGCACATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR TCA 72 bp GGTTTCACCATGCTGGCCAGGATGGCCTCGATCTGCTaGCCTCGTGATCTGTCCGCCTCGGCCTCCCAAAGT +
Preference number: 3 (lower is better)
Translates to: GFTMLARMASIC*PRDLSASASQS
Trigger: ACTTTGGGAGGCCGAGGCGGACAGATCACGAGGTCAGCAGATCGAGGCCATCCTGGCCAGCATGGTGAAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CCA 72 bp CCGGCGCCGGTGCAGGTCCTCGCATGCTGGGTGTGCTaGTCCCCTGGGCCCACTGTTCTTTCTTTATACTTT +
Preference number: 3 (lower is better)
Translates to: PAPVQVLACWVC*SPGPTVLSLYF
Trigger: AAAGTATAAAGAAAGAACAGTGGGCCCAGGGGACCAGCACACCCAGCATGCGAGGACCTGCACCGGCGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR GCA 72 bp GGGACACAATGCACTGCGGAAAGCCGCAGGGACCTCTaGCCAAGAAAGCCTGGGTATTGTCCAAGGTTTCCT +
Preference number: 3 (lower is better)
Translates to: GTQCTAESRRDL*PRKPGYCPRFP
Trigger: AGGAAACCTTGGACAATACCCAGGCTTTCTTGGGCAGAGGTCCCTGCGGCTTTCCGCAGTGCATTGTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR TCA 72 bp GGGTATTGTCCAAGGTTTCCTCCCACTGAGACAGCCTaGGATACGGCCTCGTGGGAAAGGAAAGGCCTTACC +
Preference number: 3 (lower is better)
Translates to: GYCPRFPPTETA*DTASWERKGLT
Trigger: GGTAAGGCCTTTCCTTTCCCACGAGGCCGTATCTCAGGCTGTCTCAGTGGGAGGAAACCTTGGACAATACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR TCA 72 bp TTCATGATACAGATTCCTTTGCTCACGTTTCCCTGCTaGCCTTCTCCCCACCTGTTGCCCCGCTACACTCCC +
Preference number: 3 (lower is better)
Translates to: FMIQIPLLTFPC*PSPHLLPRYTP
Trigger: GGGAGTGTAGCGGGGCAACAGGTGGGGAGAAGGTCAGCAGGGAAACGTGAGCAAAGGAATCTGTATCATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR GCA 72 bp TTTCTCCATTCTCGATTAACCAGGGACACAATGCACTaGGGAAAGCCGCAGGGACCTCTGCCCAAGAAAGCC +
Preference number: 3 (lower is better)
Translates to: FLHSRLTRDTMH*GKPQGPLPKKA
Trigger: GGCTTTCTTGGGCAGAGGTCCCTGCGGCTTTCCGCAGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR TCA 72 bp AAGAAAGCCTGGGTATTGTCCAAGGTTTCCTCCCACTaGGACAGCCTGAGATACGGCCTCGTGGGAAAGGAA +
Preference number: 3 (lower is better)
Translates to: KKAWVLSKVSSH*DSLRYGLVGKE
Trigger: TTCCTTTCCCACGAGGCCGTATCTCAGGCTGTCTCAGTGGGAGGAAACCTTGGACAATACCCAGGCTTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR TCA 72 bp CACAGGTCTGCAGGGGAATCATTGCAAGACCTCAGGTaGTGCCTGGAGCCACAGATAGTACTAAACCCTACG +
Preference number: 3 (lower is better)
Translates to: HRSAGESLQDLR*CLEPQIVLNPT
Trigger: CGTAGGGTTTAGTACTATCTGTGGCTCCAGGCATCACCTGAGGTCTTGCAATGATTCCCCTGCAGACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CCA 72 bp CTACAGGGGAAACATTACAAGACCTCAGGTGATGCCTaGAGCCACAGGTCTGCAGGGGAATCATTGCAAGAC +
Preference number: 3 (lower is better)
Translates to: LQGKHYKTSGDA*SHRSAGESLQD
Trigger: GTCTTGCAATGATTCCCCTGCAGACCTGTGGCTCCAGGCATCACCTGAGGTCTTGTAATGTTTCCCCTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CCA 72 bp GGAGAAAACTGCCCTGTGGCTGGAGGCGAGATATGCTaGCAGCAATACTGCTCTGTTACTCTTTGCTACACT +
Preference number: 3 (lower is better)
Translates to: GENCPVAGGEIC*QQYCSVTLCYT
Trigger: AGTGTAGCAAAGAGTAACAGAGCAGTATTGCTGCCAGCATATCTCGCCTCCAGCCACAGGGCAGTTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CCA 72 bp CTGATGGAGAAGCCAAGAGGCCCAGGGGTTGAGCCCTaGAGAATACCAACAAAAAGCAACTTGCAAAGCAGA +
Preference number: 3 (lower is better)
Translates to: LMEKPRGPGVEP*RIPTKSNLQSR
Trigger: TCTGCTTTGCAAGTTGCTTTTTGTTGGTATTCTCCAGGGCTCAACCCCTGGGCCTCTTGGCTTCTCCATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR CAA 90 bp GCCATTACAGGGGTGGAAGAGACTGTGGCAGATAGCTCAGCTGGGGACATGTTCTGTGCAGGATGTGCCTaGTTAACAATATGTTTGCAG +
Preference number: 3 (lower is better)
Translates to: AITGVEETVADSSAGDMFCAGCA*LTICLQ
Trigger: CTGCAAACATATTGTTAACAAGGCACATCCTGCACA...GAACATGTCCCCAGCTGAGCTATCTGCCACAGTCTCTTCCACCCCTGTAATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR GCA 72 bp ATAGGAGAAAACTGCCCTGTGGCTGGAGGCGAGATATaGTGGCAGCAATACTGCTCTGTTACTCTTTGCTAC +
Preference number: 3 (lower is better)
Translates to: IGENCPVAGGEI*WQQYCSVTLCY
Trigger: GTAGCAAAGAGTAACAGAGCAGTATTGCTGCCAGCATATCTCGCCTCCAGCCACAGGGCAGTTTTCTCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CCA 72 bp GCCCCAACCCTGTGCTCACAGAAACATGTGCTGTATTaGATCAGTTTAATGGATTTAGGGCTGTGCAGGATG +
Preference number: 3 (lower is better)
Translates to: APTLCSQKHVLY*ISLMDLGLCRM
Trigger: CATCCTGCACAGCCCTAAATCCATTAAACTGATCCAATACAGCACATGTTTCTGTGAGCACAGGGTTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR CAA 90 bp CCTGACGTGGAGCTCCTACAGCATGTTGGGCCTACTGTCATTACTGCACTTAGCGAAAACTGTAGGAATTaGCATAGTAGATCACCTGGT +
Preference number: 3 (lower is better)
Translates to: PDVELLQHVGPTVITALSENCRN*HSRSPG
Trigger: ACCAGGTGATCTACTATGCAAATTCCTACAGTTTTC...GCTAAGTGCAGTAATGACAGTAGGCCCAACATGCTGTAGGAGCTCCACGTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR CAA 90 bp GTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGGGACACAATGCACTGCTGTGGAAGGAAGCTATaGGTGACCTTGCCAAGAACA +
Preference number: 3 (lower is better)
Translates to: VKVIAFLHSRLTRDTMHCCGRKL*VTLPRT
Trigger: TGTTCTTGGCAAGGTCACCAATAGCTTCCTTCCACA...GCAGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CCA 72 bp GACTATTATAATAGTCCAGGTGAAGATTATAGTGGCTaGGGAAGTAGCATTGGGGGTGCCAAGAATTGGTTG +
Preference number: 3 (lower is better)
Translates to: DYYNSPGEDYSG*GSSIGGAKNWL
Trigger: CAACCAATTCTTGGCACCCCCAATGCTACTTCCCCAGCCACTATAATCTTCACCTGGACTATTATAATAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR GCA 72 bp GGATGTGCCTTGTTAACAATATGTTTGCAGGTGGTATaGTTGGTAAAAGTCATCGCCTTTCTCCATTCTCGA +
Preference number: 3 (lower is better)
Translates to: GCALLTICLQVV*LVKVIAFLHSR
Trigger: TCGAGAATGGAGAAAGGCGATGACTTTTACCAAGCATACCACCTGCAAACATATTGTTAACAAGGCACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR CAA 90 bp CAATTTCCTGACCTCATGATCCGCCGTGCCCAGCCCTTATTTCTTAAGAATAGATTAAAATCGATTGTCTaGTTAGACTTCCCCTATCCA +
Preference number: 3 (lower is better)
Translates to: QFPDLMIRRAQPLFLKNRLKSIV*LDFPYP
Trigger: TGGATAGGGGAAGTCTAACAAGACAATCGATTTTAA...TCTATTCTTAAGAAATAAGGGCTGGGCACGGCGGATCATGAGGTCAGGAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
3UTR GCA 72 bp TGGATCAGTTTAATGGATTTAGGGCTGTGCAGGATGTaGCTTGTTAACAATATGTTTGCAGGTGGTATGCTT +
Preference number: 3 (lower is better)
Translates to: WISLMDLGLCRM*LVNNMFAGGML
Trigger: AAGCATACCACCTGCAAACATATTGTTAACAAGGCACATCCTGCACAGCCCTAAATCCATTAAACTGATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR-3UTR CAA 90 bp AGGATGTGCCTTGTTAACAATATGTTTGCAGGTGGTATGCTTGGTAAAAGTCATTCAGGTGGAAAAGTGTaGACTATGGAGTTGTTTAGC +
Preference number: 3 (lower is better)
Translates to: RMCLVNNMFAGGMLGKSHSGGKV*TMELFS
Trigger: GCTAAACAACTCCATAGTCAACACTTTTCCACCTGA...ATGACTTTTACCAAGCATACCACCTGCAAACATATTGTTAACAAGGCACATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR TCA 72 bp CTGGCAGCAATACTGCTCTGTTACTCTTTGCTACACTaGAATGTTTGTGTAAAGAGAAACGTAAATCTAGCC +
Preference number: 3 (lower is better)
Translates to: LAAILLCYSLLH*NVCVKRNVNLA
Trigger: GGCTAGATTTACGTTTCTCTTTACACAAACATTTCAGTGTAGCAAAGAGTAACAGAGCAGTATTGCTGCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR GCA 72 bp ATCCTGCTGAAACTAAAACTGACATTGTCACTTCCTTaGTTGAAATGCTTCAGAGGATCCCATTATCAACAA +
Preference number: 3 (lower is better)
Translates to: ILLKLKLTLSLP*LKCFRGSHYQQ
Trigger: TTGTTGATAATGGGATCCTCTGAAGCATTTCAAGCAAGGAAGTGACAATGTCAGTTTTAGTTTCAGCAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp GCCATTACAGGGGTGGAAGAGACTGTGGCAGATAGCTCAGCTGGGGACATGTTCAGGCGGAGGTTGCAGTaGGCCCAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: AITGVEETVADSSAGDMFRRRLQ*AQIAPL
Trigger: CAGTGGCGCGATCTGGGCTCACTGCAACCTCCGCCT...GAACATGTCCCCAGCTGAGCTATCTGCCACAGTCTCTTCCACCCCTGTAATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp TACCTCTCCACCCAGGTCCTGCCTCACACTTTTGGTTCCAGCTATACACAGTGCCTGGGAGGCGGAGGTTaGAGTGAGCCCAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: YLSTQVLPHTFGSSYTQCLGGGG*SEPRSR
Trigger: GCGCGATCTGGGCTCACTGCAACCTCCGCCTCCCAG...GCACTGTGTATAGCTGGAACCAAAAGTGTGAGGCAGGACCTGGGTGGAGAGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp TCGCATGCTGGGTGTGCTGGTCCCCTGGGCCCACTGTTCTTTCTTTATACTTTGCCCGGCCTCTCCACCTaGACCTGTAAGCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SHAGCAGPLGPLFFLYTLPGLST*TCKPLA
Trigger: GGCCAGAGGCTTACAGGTCCAGGTGGAGAGGCCGGG...CAAAGTATAAAGAAAGAACAGTGGGCCCAGGGGACCAGCACACCCAGCATGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp TGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGGCATGCTGGGTGTGCTaGTCCCCTGGGCCCACTGTT +
Preference number: 4 (lower is better)
Translates to: CSSPWQLVRWSVSLNYSGACWVC*SPGPTV
Trigger: AACAGTGGGCCCAGGGGACCAGCACACCCAGCATGC...CCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp TGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGGTAGTGAGCCGAGACTaGGCCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: CSSPWQLVRWSVSLNYSGVVSRD*ATALQP
Trigger: AGGCTGGAGTGCAGTGGCGCAGTCTCGGCTCACTAC...CCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp TCCCCTCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCAGCCTCCCAGGTGGCTaGGACTACAGGTGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: SPQVIRASTGTFQVTHKPSLPGG*DYRCPP
Trigger: TGGCGGGCACCTGTAGTCCCAGCCACCTGGGAGGCT...GGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR CCA 90 bp TCCCCTCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCGTGTGTGCATGGGGCTaGGGGGTCAGGGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SPQVIRASTGTFQVTHKPVCAWG*GVRVER
Trigger: CCTCTCCACCCTGACCCCCCAGCCCCATGCACACAC...GGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGAGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp GCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTGCCCCAGGGTACCCCCTaGCGTGGAGCTCCTACAGCA +
Preference number: 4 (lower is better)
Translates to: AACQVVSQSQLLWVPLQLPQGTP*RGAPTA
Trigger: TGCTGTAGGAGCTCCACGTCAGGGGGTACCCTGGGG...CAATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp TGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGCCGAGATCATGCTACTaGGCTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: CSSPWQLVRWSVSLNYSGPRSCY*APAWAT
Trigger: TGTTGCCCAGGCTGGAGCGCAGTAGCATGATCTCGG...CCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp TGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGCCCAGATCACACCACTaGACTCCAGCCTGGGAGACA +
Preference number: 4 (lower is better)
Translates to: CSSPWQLVRWSVSLNYSGPRSHH*TPAWET
Trigger: TGTCTCCCAGGCTGGAGTGCAGTGGTGTGATCTGGG...CCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp AAAAGCTGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACGTGCAGGTCCTCGCATaGTGGGTGTGCTGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: KSCSSPWQLVRWSVSLNYVQVLA*WVCWSP
Trigger: AGGGGACCAGCACACCCAGCATGCGAGGACCTGCAC...GTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCAGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp GGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTGCCAAGGCGGGTGGATaGCCTGAGGTCCGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: GSLSGGQSVSITLGSSAIAKAGG*PEVRSS
Trigger: TGAACTCCGGACCTCAGGTCATCCACCCGCCTTGGC...AATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp TCCCCTCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCTCCACACCATTCTCCTaGCTCAGCCTCCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: SPQVIRASTGTFQVTHKPSTPFS*LSLPGG
Trigger: GCCACCTGGGAGGCTGAGGCAGGAGAATGGTGTGGA...GGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR GCA 90 bp CCTGACGTGGAGCTCCTACAGCATGTTGGGCCTACTGTCATTACTGCACTTAGCAGCCGCAGGGACCTCTaGCCAAGAAAGCCTGGGTAT +
Preference number: 4 (lower is better)
Translates to: PDVELLQHVGPTVITALSSRRDL*PRKPGY
Trigger: ATACCCAGGCTTTCTTGGGCAGAGGTCCCTGCGGCT...GCTAAGTGCAGTAATGACAGTAGGCCCAACATGCTGTAGGAGCTCCACGTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp AAAAGCTGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACGCAAGCTCCGCCTCCTaGGTCCACACCATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KSCSSPWQLVRWSVSLNYASSAS*VHTILL
Trigger: CAGGAGAATGGTGTGGACCCAGGAGGCGGAGCTTGC...GTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCAGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR CCA 90 bp GCCATTACAGGGGTGGAAGAGACTGTGGCAGATAGCTCAGCTGGGGACATGTTCAAACTGCCCTGTGGCTaGAGGCGAGATATGCTGGCA +
Preference number: 4 (lower is better)
Translates to: AITGVEETVADSSAGDMFKLPCG*RRDMLA
Trigger: TGCCAGCATATCTCGCCTCCAGCCACAGGGCAGTTT...GAACATGTCCCCAGCTGAGCTATCTGCCACAGTCTCTTCCACCCCTGTAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp CCTGACGTGGAGCTCCTACAGCATGTTGGGCCTACTGTCATTACTGCACTTAGCAGGGTTTCATCGTGTTaGCCAGGCCGGTCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: PDVELLQHVGPTVITALSRVSSC*PGRSPN
Trigger: GTTGGGAGACCGGCCTGGCCAACACGATGAAACCCT...GCTAAGTGCAGTAATGACAGTAGGCCCAACATGCTGTAGGAGCTCCACGTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CAA 72 bp CCAGGGTACCCCCTGACGTGGAGCTCCTACAGCATGTaGGGCCTACTGTCATTACTGCACTTAGCACAGAGT +
Preference number: 4 (lower is better)
Translates to: PGYPLTWSSYSM*GLLSLLHLAQS
Trigger: ACTCTGTGCTAAGTGCAGTAATGACAGTAGGCCCAACATGCTGTAGGAGCTCCACGTCAGGGGGTACCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp GCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTGACTCCTGGCCTTGAGTaGTCCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: AACQVVSQSQLLWVPLQLTPGLE*SSCLSL
Trigger: GAGGCTGAGGCAGGAGGATCACTCAAGGCCAGGAGT...CAATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp TCGCATGCTGGGTGTGCTGGTCCCCTGGGCCCACTGTTCTTTCTTTATACTTTGGCCTGGCCAACATGGTaGATCCCCGTCTCTACTAGA +
Preference number: 4 (lower is better)
Translates to: SHAGCAGPLGPLFFLYTLAWPTW*IPVSTR
Trigger: TCTAGTAGAGACGGGGATTCACCATGTTGGCCAGGC...CAAAGTATAAAGAAAGAACAGTGGGCCCAGGGGACCAGCACACCCAGCATGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp TCCCCTCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCCTCACGTTTCCCTGCTaGCCTTCTCCCCACCTGTTG +
Preference number: 4 (lower is better)
Translates to: SPQVIRASTGTFQVTHKPLTFPC*PSPHLL
Trigger: CAACAGGTGGGGAGAAGGTCAGCAGGGAAACGTGAG...GGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp CCTGACGTGGAGCTCCTACAGCATGTTGGGCCTACTGTCATTACTGCACTTAGCAAGGTTTCCTCCCACTaGGACAGCCTGAGATACGGC +
Preference number: 4 (lower is better)
Translates to: PDVELLQHVGPTVITALSKVSSH*DSLRYG
Trigger: GCCGTATCTCAGGCTGTCTCAGTGGGAGGAAACCTT...GCTAAGTGCAGTAATGACAGTAGGCCCAACATGCTGTAGGAGCTCCACGTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp TACCTCTCCACCCAGGTCCTGCCTCACACTTTTGGTTCCAGCTATACACAGTGCTTACAAGACCTCAGGTaGTGCCTGGAGCCACAGGTC +
Preference number: 4 (lower is better)
Translates to: YLSTQVLPHTFGSSYTQCLQDLR*CLEPQV
Trigger: GACCTGTGGCTCCAGGCATCACCTGAGGTCTTGTAA...GCACTGTGTATAGCTGGAACCAAAAGTGTGAGGCAGGACCTGGGTGGAGAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp GTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGGGACACAATGCACTGCAACCGTCCTCCATCCTaGCCCCCGCCGCCATTTCCC +
Preference number: 4 (lower is better)
Translates to: VKVIAFLHSRLTRDTMHCNRPPS*PPPPFP
Trigger: GGGAAATGGCGGCGGGGGGCAGGATGGAGGACGGTT...GCAGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp TGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGGGGTTCCTCTGCAATTaGTGTCATGACCGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: CSSPWQLVRWSVSLNYSGGFLCN*CHDREP
Trigger: AGGCTCACGGTCATGACAGCAATTGCAGAGGAACCC...CCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR GCA 90 bp TACCTCTCCACCCAGGTCCTGCCTCACACTTTTGGTTCCAGCTATACACAGTGCGATAGGGTTTCACCATaGTGGCCAGGATGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: YLSTQVLPHTFGSSYTQCDRVSP*WPGWPR
Trigger: TCGAGGCCATCCTGGCCAGCATGGTGAAACCCTATC...GCACTGTGTATAGCTGGAACCAAAAGTGTGAGGCAGGACCTGGGTGGAGAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp AAAAGCTGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACAGCTGCAGTTCCCCGTaGCAGCTTGTCAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: KSCSSPWQLVRWSVSLNYSCSSP*QLVRWS
Trigger: TGACCACCTGACAAGCTGCCACGGGGAACTGCAGCT...GTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCAGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR CCA 90 bp TCCCCTCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCGGGTACCCCCTGACGTaGAGCTCCTACAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: SPQVIRASTGTFQVTHKPGYPLT*SSYSML
Trigger: CAACATGCTGTAGGAGCTCCACGTCAGGGGGTACCC...GGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGAGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp TACCTCTCCACCCAGGTCCTGCCTCACACTTTTGGTTCCAGCTATACACAGTGCAGGGTTTCACCATGCTaGCCAGGATGGCCTCGATCT +
Preference number: 4 (lower is better)
Translates to: YLSTQVLPHTFGSSYTQCRVSPC*PGWPRS
Trigger: AGATCGAGGCCATCCTGGCCAGCATGGTGAAACCCT...GCACTGTGTATAGCTGGAACCAAAAGTGTGAGGCAGGACCTGGGTGGAGAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp AAAAGCTGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACGGGTGGAAGAGACTGTaGCAGATAGCTCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KSCSSPWQLVRWSVSLNYGWKRL*QIAQLG
Trigger: CCCCAGCTGAGCTATCTGCCACAGTCTCTTCCACCC...GTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCAGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp TACCTCTCCACCCAGGTCCTGCCTCACACTTTTGGTTCCAGCTATACACAGTGCAGACCACCAAGAGAGTaGACGCTGATGGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: YLSTQVLPHTFGSSYTQCRPPRE*TLMEKP
Trigger: TGGCTTCTCCATCAGCGTTCACTCTCTTGGTGGTCT...GCACTGTGTATAGCTGGAACCAAAAGTGTGAGGCAGGACCTGGGTGGAGAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp AAAAGCTGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACAAAGAAAGGCGCCATTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: KSCSSPWQLVRWSVSLNYKERRH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAATGGCGCCTTTCTTT...GTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp GCCATTACAGGGGTGGAAGAGACTGTGGCAGATAGCTCAGCTGGGGACATGTTCGTTCACTGCAATCTCTaGCTCCCAGGCTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: AITGVEETVADSSAGDMFVHCNL*LPGSSN
Trigger: ATTGCTTGAGCCTGGGAGGCAGAGATTGCAGTGAAC...GAACATGTCCCCAGCTGAGCTATCTGCCACAGTCTCTTCCACCCCTGTAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp AAAAGCTGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACCTCGGCCTCCCAAAGTaGTGGAATTACCGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: KSCSSPWQLVRWSVSLNYLGLPK*WNYRCE
Trigger: CTCACACCGGTAATTCCAGCACTTTGGGAGGCCGAG...GTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp GCCATTACAGGGGTGGAAGAGACTGTGGCAGATAGCTCAGCTGGGGACATGTTCCGTGTGGTGGTGTGGTaGACATCTATAATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: AITGVEETVADSSAGDMFRVVVW*TSIIPA
Trigger: AGCTGGGATTATAGATGTGCACCACACCACCACACG...GAACATGTCCCCAGCTGAGCTATCTGCCACAGTCTCTTCCACCCCTGTAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp GCCATTACAGGGGTGGAAGAGACTGTGGCAGATAGCTCAGCTGGGGACATGTTCCTGGGCATCCAGAAGTaGGTCGTCTTCAATACTCTG +
Preference number: 4 (lower is better)
Translates to: AITGVEETVADSSAGDMFLGIQK*VVFNTL
Trigger: CAGAGTATTGAAGACGACCCACTTCTGGATGCCCAG...GAACATGTCCCCAGCTGAGCTATCTGCCACAGTCTCTTCCACCCCTGTAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp TACCTCTCCACCCAGGTCCTGCCTCACACTTTTGGTTCCAGCTATACACAGTGCGAGAAAACTGCCCTGTaGCTGGAGGCGAGATATGCT +
Preference number: 4 (lower is better)
Translates to: YLSTQVLPHTFGSSYTQCEKTAL*LEARYA
Trigger: AGCATATCTCGCCTCCAGCCACAGGGCAGTTTTCTC...GCACTGTGTATAGCTGGAACCAAAAGTGTGAGGCAGGACCTGGGTGGAGAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp TCCCCTCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCCCAGGTCTGAGGAAGTaGGAGCCAACAATCGCTTAC +
Preference number: 4 (lower is better)
Translates to: SPQVIRASTGTFQVTHKPPGLRK*EPTIAY
Trigger: GTAAGCGATTGTTGGCTCTCACTTCCTCAGACCTGG...GGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGAGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR TCA 90 bp TGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGGGAGGAAGGCCTGGCTaGAGATTCACATTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: CSSPWQLVRWSVSLNYSGGGRPG*RFTFGN
Trigger: ATTTCCAAATGTGAATCTTCAGCCAGGCCTTCCTCC...CCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp CCTGACGTGGAGCTCCTACAGCATGTTGGGCCTACTGTCATTACTGCACTTAGCAGCTACTCAGGAGGCTaGCTGAAGTGGGAGGATTTT +
Preference number: 4 (lower is better)
Translates to: PDVELLQHVGPTVITALSSYSGG*LKWEDF
Trigger: AAAATCCTCCCACTTCAGTCAGCCTCCTGAGTAGCT...GCTAAGTGCAGTAATGACAGTAGGCCCAACATGCTGTAGGAGCTCCACGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp GTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGGGACACAATGCACTGCGATGGAGTCTCGCTCTaGTCTGTCGCCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VKVIAFLHSRLTRDTMHCDGVSL*SVARLE
Trigger: CTCCAGCCTGGCGACAGAGCAGAGCGAGACTCCATC...GCAGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp GTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGGGACACAATGCACTGCGGACCTGTAAGCCTCTaGCCGCGAAACTCGCCACCT +
Preference number: 4 (lower is better)
Translates to: VKVIAFLHSRLTRDTMHCGPVSL*PRNSPP
Trigger: AGGTGGCGAGTTTCGCGGCCAGAGGCTTACAGGTCC...GCAGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp TGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTGGCAGCTTGTCAGGTaGTCAGTCAGTCTCAATTAC +
Preference number: 4 (lower is better)
Translates to: CSSPWQLVRWSVSLNYSGWQLVR*SVSLNY
Trigger: GTAATTGAGACTGACTGACCACCTGACAAGCTGCCA...CCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR CCA 90 bp TGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGCAAGCTGGAATGCAGTaGTGCAATTTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: CSSPWQLVRWSVSLNYSGQAGMQ*CNFSSL
Trigger: CAGTGAGCTGAAATTGCACCACTGCATTCCAGCTTG...CCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp AAAAGCTGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACGCAGTGGCACCATCTTaGTTCACTGCAATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: KSCSSPWQLVRWSVSLNYAVAPS*FTAISA
Trigger: GGCAGAGATTGCAGTGAACCAAGATGGTGCCACTGC...GTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCAGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp GCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTGGGTGTGCTGGTCCCCTaGGCCCACTGTTCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: AACQVVSQSQLLWVPLQLGVLVP*AHCSFF
Trigger: AAAGAAAGAACAGTGGGCCCAGGGGACCAGCACACC...CAATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp TACCTCTCCACCCAGGTCCTGCCTCACACTTTTGGTTCCAGCTATACACAGTGCATATCAGGGAACAGATaGGTTCCAGTGCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: YLSTQVLPHTFGSSYTQCISGNR*VPVPRW
Trigger: CCATCTTGGCACTGGAACTCATCTGTTCCCTGATAT...GCACTGTGTATAGCTGGAACCAAAAGTGTGAGGCAGGACCTGGGTGGAGAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp GGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTCCAGGTCTGAGGAAGTaGGAGCCAACAATCGCTTAC +
Preference number: 4 (lower is better)
Translates to: GSLSGGQSVSITLGSSAIPGLRK*EPTIAY
Trigger: GTAAGCGATTGTTGGCTCTCACTTCCTCAGACCTGG...AATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR TCA 90 bp GGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTAGCAAGAGAATCACTTaGACCTGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GSLSGGQSVSITLGSSAISKRIT*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGTGATTCTCTTGCT...AATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp TGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGACACCTGGCCACAAGTaGCATTTGAACAAAGACTTG +
Preference number: 4 (lower is better)
Translates to: CSSPWQLVRWSVSLNYSGTPGHK*HLNKDL
Trigger: CAAGTCTTTGTTCAAATGTCACTTGTGGCCAGGTGT...CCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp GGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTGCTCACTGCAACCTCTaGCTCCTGTGTTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: GSLSGGQSVSITLGSSAIAHCNL*LLCSSD
Trigger: ATCGCTTGAACACAGGAGGCAGAGGTTGCAGTGAGC...AATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp AAAAGCTGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACGCAATTTCAGCTCACTaGAACCTCTGCCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: KSCSSPWQLVRWSVSLNYAISAH*NLCLLC
Trigger: ACACAGGAGGCAGAGGTTGCAGTGAGCTGAAATTGC...GTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp CCTGACGTGGAGCTCCTACAGCATGTTGGGCCTACTGTCATTACTGCACTTAGCTTGCCCAAGCTGGAATaGAGTGGTGCAATTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PDVELLQHVGPTVITALSLPKLE*SGAISA
Trigger: AGCTGAAATTGCACCACTGCATTCCAGCTTGGGCAA...GCTAAGTGCAGTAATGACAGTAGGCCCAACATGCTGTAGGAGCTCCACGTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp AAAAGCTGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACCTGGGCATCCAGAAGTaGGTCGTCTTCAATACTCTG +
Preference number: 4 (lower is better)
Translates to: KSCSSPWQLVRWSVSLNYLGIQK*VVFNTL
Trigger: CAGAGTATTGAAGACGACCCACTTCTGGATGCCCAG...GTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR CCA 90 bp TCGCATGCTGGGTGTGCTGGTCCCCTGGGCCCACTGTTCTTTCTTTATACTTTGTGGCAGCTTGTCAGGTaGTCAGTCAGTCTCAATTAC +
Preference number: 4 (lower is better)
Translates to: SHAGCAGPLGPLFFLYTLWQLVR*SVSLNY
Trigger: GTAATTGAGACTGACTGACCACCTGACAAGCTGCCA...CAAAGTATAAAGAAAGAACAGTGGGCCCAGGGGACCAGCACACCCAGCATGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp TTTTCAAGTGACCCACAAGCCCTATATTTTAAACAGCCACAGAAGTCAGAACCAAGCCTCCCAGGTGGCTaGGACTACAGGTGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: FSSDPQALYFKQPQKSEPSLPGG*DYRCPP
Trigger: TGGCGGGCACCTGTAGTCCCAGCCACCTGGGAGGCT...TGGTTCTGACTTCTGTGGCTGTTTAAAATATAGGGCTTGTGGGTCACTTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR CCA 90 bp GGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTCAGGCTAGAGTACAGTaGCGTGATCTTGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: GSLSGGQSVSITLGSSAIQARVQ*RDLASL
Trigger: CAGTGAGGCAAGATCACGCCACTGTACTCTAGCCTG...AATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp TGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTCTAGAAGGGGCAGTTaGACACATAAGTCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: CSSPWQLVRWSVSLNYSGSRRGS*THKSGV
Trigger: AACTCCAGACTTATGTGTCCAACTGCCCCTTCTAGA...CCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp TCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCTATATACCTCAGGTGATGCCTaGAGCCACAGGTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSYPGFYRYFSSDPQALYTSGDA*SHRSAG
Trigger: CCCTGCAGACCTGTGGCTCCAGGCATCACCTGAGGT...ATATAGGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CAA 72 bp GTCCAGGTGAAGATTATAGTGGCTGGGGAAGTAGCATaGGGGGTGCCAAGAATTGGTTGGACTCTGGGTATG +
Preference number: 4 (lower is better)
Translates to: VQVKIIVAGEVA*GVPRIGWTLGM
Trigger: CATACCCAGAGTCCAACCAATTCTTGGCACCCCCAATGCTACTTCCCCAGCCACTATAATCTTCACCTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp CCTGACGTGGAGCTCCTACAGCATGTTGGGCCTACTGTCATTACTGCACTTAGCAATCGGGGTCTAAAGTaGGCTTGTAATGAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: PDVELLQHVGPTVITALSNRGLK*ACNEWC
Trigger: ACACCACTCATTACAAGCTCACTTTAGACCCCGATT...GCTAAGTGCAGTAATGACAGTAGGCCCAACATGCTGTAGGAGCTCCACGTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp TGCGGAAAGCCGCAGGGACCTCTGCCCAAGAAAGCCTGGGTATTGTCCAAGGTTAGGATTATAACCGTCTaGACTTTCAATGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: CGKPQGPLPKKAWVLSKVRIITV*TFNGFV
Trigger: CACAAACCCATTGAAAGTTCAGACGGTTATAATCCT...AACCTTGGACAATACCCAGGCTTTCTTGGGCAGAGGTCCCTGCGGCTTTCCGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp TCCCCTCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCTGTCACTTCCTTGCTTaGAATGCTTCAGAGGATCCC +
Preference number: 4 (lower is better)
Translates to: SPQVIRASTGTFQVTHKPCHFLA*NASEDP
Trigger: GGGATCCTCTGAAGCATTTCAAGCAAGGAAGTGACA...GGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp GGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTCCTGTGCGACACGAGTaGGACTCCATCTCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: GSLSGGQSVSITLGSSAIPVRHE*DSISRK
Trigger: TTTTCTTGAGATGGAGTCTCACTCGTGTCGCACAGG...AATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp GCCATTACAGGGGTGGAAGAGACTGTGGCAGATAGCTCAGCTGGGGACATGTTCAGAAAACTTTTAGAATaGCCCGGCAATGGCTGTATC +
Preference number: 4 (lower is better)
Translates to: AITGVEETVADSSAGDMFRKLLE*PGNGCI
Trigger: GATACAGCCATTGCCGGGGCATTCTAAAAGTTTTCT...GAACATGTCCCCAGCTGAGCTATCTGCCACAGTCTCTTCCACCCCTGTAATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp GGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTACAGGCATGAGCAACTaGTCCCAGCCATACACAATC +
Preference number: 4 (lower is better)
Translates to: GSLSGGQSVSITLGSSAITGMSN*SQPYTI
Trigger: GATTGTGTATGGCTGGGAGCAGTTGCTCATGCCTGT...AATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp GTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGGGACACAATGCACTGCGTGATCTTGCCTCACTaGAACCTCCACCTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: VKVIAFLHSRLTRDTMHCVILPH*NLHLLG
Trigger: ACCCAGCAGGTGGAGGTTGCAGTGAGGCAAGATCAC...GCAGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp TACCTCTCCACCCAGGTCCTGCCTCACACTTTTGGTTCCAGCTATACACAGTGCATGGATTTAGGGCTGTaGAGGATGTGCCTTGTTAAC +
Preference number: 4 (lower is better)
Translates to: YLSTQVLPHTFGSSYTQCMDLGL*RMCLVN
Trigger: GTTAACAAGGCACATCCTGCACAGCCCTAAATCCAT...GCACTGTGTATAGCTGGAACCAAAAGTGTGAGGCAGGACCTGGGTGGAGAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp GCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTGTTAGCCCCAACCCTGTaGTCACAGAAACATGTGCTG +
Preference number: 4 (lower is better)
Translates to: AACQVVSQSQLLWVPLQLLAPTL*SQKHVL
Trigger: CAGCACATGTTTCTGTGAGCACAGGGTTGGGGCTAA...CAATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp GGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTGCTCCTACAGCATGTTaGGCCTACTGTCATTACTGC +
Preference number: 4 (lower is better)
Translates to: GSLSGGQSVSITLGSSAIAPTAC*AYCHYC
Trigger: GCAGTAATGACAGTAGGCCCAACATGCTGTAGGAGC...AATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp GGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTATTAGCTGGGTGTGGTaGTATGTGCCGGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: GSLSGGQSVSITLGSSAIISWVW*YVPVIP
Trigger: TGGGATTACCGGCACATACCACCACACCCAGCTAAT...AATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp AAAAGCTGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACAGCCCAGGTTACAGCTaGATTACAGGAACAGGCTTT +
Preference number: 4 (lower is better)
Translates to: KSCSSPWQLVRWSVSLNYSPGYS*ITGTGF
Trigger: AAAGCCTGTTCCTGTAATCCAGCTGTAACCTGGGCT...GTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCAGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp AAAAGCTGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACAATCGGGGTCTAAAGTaGGCTTGTAATGAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: KSCSSPWQLVRWSVSLNYNRGLK*ACNEWC
Trigger: ACACCACTCATTACAAGCTCACTTTAGACCCCGATT...GTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCAGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR TCA 90 bp AAAAGCTGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACCAGGTGGAAAAGTGTTaGCTATGGAGTTGTTTAGCC +
Preference number: 4 (lower is better)
Translates to: KSCSSPWQLVRWSVSLNYQVEKC*LWSCLA
Trigger: GGCTAAACAACTCCATAGTCAACACTTTTCCACCTG...GTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCAGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR TCA 90 bp CAATTTCCTGACCTCATGATCCGCCGTGCCCAGCCCTTATTTCTTAAGAATAGAAAAAGGTCAGGAGTTTaGGACCAGCCTGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: QFPDLMIRRAQPLFLKNRKRSGV*DQPGQH
Trigger: ATGCTGGCCAGGCTGGTCTCAAACTCCTGACCTTTT...TCTATTCTTAAGAAATAAGGGCTGGGCACGGCGGATCATGAGGTCAGGAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp TACCTCTCCACCCAGGTCCTGCCTCACACTTTTGGTTCCAGCTATACACAGTGCAGTAGAGTAGTAGAGTaGAAGGTGAGACTGGATAGA +
Preference number: 4 (lower is better)
Translates to: YLSTQVLPHTFGSSYTQCSRVVE*KVRLDR
Trigger: TCTATCCAGTCTCACCTTTCACTCTACTACTCTACT...GCACTGTGTATAGCTGGAACCAAAAGTGTGAGGCAGGACCTGGGTGGAGAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp TCCCCTCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCCCATTCGTTCTATTCTaGGATAGGAGAAAACTGCCC +
Preference number: 4 (lower is better)
Translates to: SPQVIRASTGTFQVTHKPPFVLF*DRRKLP
Trigger: GGGCAGTTTTCTCCTATCTCAGAATAGAACGAATGG...GGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGAGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp TACCTCTCCACCCAGGTCCTGCCTCACACTTTTGGTTCCAGCTATACACAGTGCGGCTTTGGCTTTTACTaGATGAAAAAGGGAACCATC +
Preference number: 4 (lower is better)
Translates to: YLSTQVLPHTFGSSYTQCGFGFY*MKKGTI
Trigger: GATGGTTCCCTTTTTCATTCAGTAAAAGCCAAAGCC...GCACTGTGTATAGCTGGAACCAAAAGTGTGAGGCAGGACCTGGGTGGAGAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp GCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTGCTTCAATACTCTGGGTaGTATCCAAGGAACCTGTGG +
Preference number: 4 (lower is better)
Translates to: AACQVVSQSQLLWVPLQLLQYSG*YPRNLW
Trigger: CCACAGGTTCCTTGGATATCACCCAGAGTATTGAAG...CAATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506087.5
CDS-3UTR GCA 90 bp GCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTGACAGATGAGTTCCAGTaGCAAGATGGCCAGAATGAG +
Preference number: 4 (lower is better)
Translates to: AACQVVSQSQLLWVPLQLTDEFQ*QDGQNE
Trigger: CTCATTCTGGCCATCTTGGCACTGGAACTCATCTGT...CAATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR GCA 90 bp GGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTACAGATGAGTTCCAGTaGCAAGATGGCCAGAATGAG +
Preference number: 4 (lower is better)
Translates to: GSLSGGQSVSITLGSSAITDEFQ*QDGQNE
Trigger: CTCATTCTGGCCATCTTGGCACTGGAACTCATCTGT...AATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR GCA 90 bp TTTTCAAGTGACCCACAAGCCCTATATTTTAAACAGCCACAGAAGTCAGAACCATCCACACCATTCTCCTaGCTCAGCCTCCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: FSSDPQALYFKQPQKSEPSTPFS*LSLPGG
Trigger: GCCACCTGGGAGGCTGAGGCAGGAGAATGGTGTGGA...TGGTTCTGACTTCTGTGGCTGTTTAAAATATAGGGCTTGTGGGTCACTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR CCA 90 bp TGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGGGTTCTAATGTCAGGTaGAAAAGTGTTGACTATGGA +
Preference number: 4 (lower is better)
Translates to: CSSPWQLVRWSVSLNYSGGSNVR*KSVDYG
Trigger: TCCATAGTCAACACTTTTCCACCTGACATTAGAACC...CCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR CCA 90 bp TTTTCAAGTGACCCACAAGCCCTATATTTTAAACAGCCACAGAAGTCAGAACCAGCAAGCTCCGCCTCCTaGGTCCACACCATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FSSDPQALYFKQPQKSEPASSAS*VHTILL
Trigger: CAGGAGAATGGTGTGGACCCAGGAGGCGGAGCTTGC...TGGTTCTGACTTCTGTGGCTGTTTAAAATATAGGGCTTGTGGGTCACTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR CCA 90 bp TACCTCTCCACCCAGGTCCTGCCTCACACTTTTGGTTCCAGCTATACACAGTGCACCCTGCACCACACCTaGCTGATATTTGTATTCTTA +
Preference number: 4 (lower is better)
Translates to: YLSTQVLPHTFGSSYTQCTLHHT*LIFVFL
Trigger: TAAGAATACAAATATCAGCCAGGTGTGGTGCAGGGT...GCACTGTGTATAGCTGGAACCAAAAGTGTGAGGCAGGACCTGGGTGGAGAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp CAATTTCCTGACCTCATGATCCGCCGTGCCCAGCCCTTATTTCTTAAGAATAGAGCAACCTCCACCTGCTaGGTTCAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: QFPDLMIRRAQPLFLKNRATSTC*VQAILL
Trigger: CAGGAGAATTGCTTGAACCCAGCAGGTGGAGGTTGC...TCTATTCTTAAGAAATAAGGGCTGGGCACGGCGGATCATGAGGTCAGGAAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp TGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGAGAGATAGGCTTCCCTaGTTTGCGAATGAAACAATT +
Preference number: 4 (lower is better)
Translates to: CSSPWQLVRWSVSLNYSGRDRLP*FANETI
Trigger: AATTGTTTCATTCGCAAACCAGGGAAGCCTATCTCT...CCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp TCCCCTCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCGGAAGTGATCAACTGTaGGGAAAAGAGAGAGATCAG +
Preference number: 4 (lower is better)
Translates to: SPQVIRASTGTFQVTHKPGSDQL*GKERDQ
Trigger: CTGATCTCTCTCTTTTCCCCACAGTTGATCACTTCC...GGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp GGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTGTTAGCCACCACACCTaGCCACAAGTGACATTTGAA +
Preference number: 4 (lower is better)
Translates to: GSLSGGQSVSITLGSSAIVSHHT*PQVTFE
Trigger: TTCAAATGTCACTTGTGGCCAGGTGTGGTGGCTAAC...AATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp GCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTGGAACACACTGCAGCCTaGCACTGCAGAACGTTTTAT +
Preference number: 4 (lower is better)
Translates to: AACQVVSQSQLLWVPLQLEHTAA*HCRTFY
Trigger: ATAAAACGTTCTGCAGTGCCAGGCTGCAGTGTGTTC...CAATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506087.5
CDS-3UTR TCA 90 bp AAAAGCTGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACAAGCTATATGGTCCATaGTGTCATCCAACACCACAT +
Preference number: 4 (lower is better)
Translates to: KSCSSPWQLVRWSVSLNYKLYGP*CHPTPH
Trigger: ATGTGGTGTTGGATGACATCATGGACCATATAGCTT...GTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCAGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR TCA 90 bp TACCTCTCCACCCAGGTCCTGCCTCACACTTTTGGTTCCAGCTATACACAGTGCATCATAAACAGAAAGTaGAAACAGAGCCCAGGTTAC +
Preference number: 4 (lower is better)
Translates to: YLSTQVLPHTFGSSYTQCIINRK*KQSPGY
Trigger: GTAACCTGGGCTCTGTTTTCACTTTCTGTTTATGAT...GCACTGTGTATAGCTGGAACCAAAAGTGTGAGGCAGGACCTGGGTGGAGAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp TCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCTATATGGGTTCCTCTGCAATTaGTGTCATGACCGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: SSYPGFYRYFSSDPQALYGFLCN*CHDREP
Trigger: AGGCTCACGGTCATGACAGCAATTGCAGAGGAACCC...ATATAGGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR GCA 90 bp AAAAGCTGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACGCTAATGGAAGGTGCTaGCAATATAATAGGCAACAC +
Preference number: 4 (lower is better)
Translates to: KSCSSPWQLVRWSVSLNYANGRC*QYNRQH
Trigger: GTGTTGCCTATTATATTGGCAGCACCTTCCATTAGC...GTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCAGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR GCA 90 bp GTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGGGACACAATGCACTGCGAGAGAAAGAGGAGCTaGCATTACAGGGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: VKVIAFLHSRLTRDTMHCERKRS*HYRGGR
Trigger: TCTTCCACCCCTGTAATGGCAGCTCCTCTTTCTCTC...GCAGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp CCTGACGTGGAGCTCCTACAGCATGTTGGGCCTACTGTCATTACTGCACTTAGCCCACTGTCCAGGCTTTaGCTTTTACTGAATGAAAAA +
Preference number: 4 (lower is better)
Translates to: PDVELLQHVGPTVITALSPLSRL*LLLNEK
Trigger: TTTTTCATTCAGTAAAAGCCAAAGCCTGGACAGTGG...GCTAAGTGCAGTAATGACAGTAGGCCCAACATGCTGTAGGAGCTCCACGTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp GTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGGGACACAATGCACTGCCTTCAATACTCTGGGTaGTATCCAAGGAACCGTCCT +
Preference number: 4 (lower is better)
Translates to: VKVIAFLHSRLTRDTMHCLQYSG*YPRNRP
Trigger: AGGACGGTTCCTTGGATATCACCCAGAGTATTGAAG...GCAGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp GTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGGGACACAATGCACTGCTCAACGCAAGTCTCTTaGGATGCCTTGTTGATCGGT +
Preference number: 4 (lower is better)
Translates to: VKVIAFLHSRLTRDTMHCSTQVS*DALLIG
Trigger: ACCGATCAACAAGGCATCTCAAGAGACTTGCGTTGA...GCAGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp CAATTTCCTGACCTCATGATCCGCCGTGCCCAGCCCTTATTTCTTAAGAATAGAATATCAGGGAACAGATaGGTTCCAGTGCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: QFPDLMIRRAQPLFLKNRISGNR*VPVPRW
Trigger: CCATCTTGGCACTGGAACTCATCTGTTCCCTGATAT...TCTATTCTTAAGAAATAAGGGCTGGGCACGGCGGATCATGAGGTCAGGAAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR TCA 90 bp GCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTGCAGGTACTTTTCAAGTaGCCCACAAGCCCTATATTT +
Preference number: 4 (lower is better)
Translates to: AACQVVSQSQLLWVPLQLQVLFK*PTSPIF
Trigger: AAATATAGGGCTTGTGGGTCACTTGAAAAGTACCTG...CAATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR TCA 90 bp GGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTAAGCTATATGGTCCATaGTGTCATCCAACACCACAT +
Preference number: 4 (lower is better)
Translates to: GSLSGGQSVSITLGSSAIKLYGP*CHPTPH
Trigger: ATGTGGTGTTGGATGACATCATGGACCATATAGCTT...AATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR TCA 90 bp GGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTTTTGGCTTTAGTTTGTaGATGTTGTGTGCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: GSLSGGQSVSITLGSSAIFGFSL*MLCAGD
Trigger: GTCACCTGCACACAACATTCACAAACTAAAGCCAAA...AATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp TTTTCAAGTGACCCACAAGCCCTATATTTTAAACAGCCACAGAAGTCAGAACCAAGAAGGAGGTTGCAGTaGGCCCAGATCACACCACTG +
Preference number: 4 (lower is better)
Translates to: FSSDPQALYFKQPQKSEPRRRLQ*AQITPL
Trigger: CAGTGGTGTGATCTGGGCTCACTGCAACCTCCTTCT...TGGTTCTGACTTCTGTGGCTGTTTAAAATATAGGGCTTGTGGGTCACTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp TTTTCAAGTGACCCACAAGCCCTATATTTTAAACAGCCACAGAAGTCAGAACCACTGGTCTCTAACTCCTaGCCTTGTGATCCACCCACC +
Preference number: 4 (lower is better)
Translates to: FSSDPQALYFKQPQKSEPLVSNS*PCDPPT
Trigger: GGTGGGTGGATCACAAGGTCAGGAGTTAGAGACCAG...TGGTTCTGACTTCTGTGGCTGTTTAAAATATAGGGCTTGTGGGTCACTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp TTTTCAAGTGACCCACAAGCCCTATATTTTAAACAGCCACAGAAGTCAGAACCACAAGAGAGTGAACGCTaGTGGAGAAGCCAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: FSSDPQALYFKQPQKSEPQESER*WRSQEA
Trigger: GGCCTCTTGGCTTCTCCATCAGCGTTCACTCTCTTG...TGGTTCTGACTTCTGTGGCTGTTTAAAATATAGGGCTTGTGGGTCACTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp TCCCCTCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCATTCTATCAAAGTCATaGGATTGTGTGAGACCACCA +
Preference number: 4 (lower is better)
Translates to: SPQVIRASTGTFQVTHKPILSKS*DCVRPP
Trigger: TGGTGGTCTCACACAATCTCATGACTTTGATAGAAT...GGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp CAATTTCCTGACCTCATGATCCGCCGTGCCCAGCCCTTATTTCTTAAGAATAGAACTGTCTATAGGGTTTaGGAGAAAGAGGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: QFPDLMIRRAQPLFLKNRTVYRV*EKEELP
Trigger: TGGCAGCTCCTCTTTCTCTCAAACCCTATAGACAGT...TCTATTCTTAAGAAATAAGGGCTGGGCACGGCGGATCATGAGGTCAGGAAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp GTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGGGACACAATGCACTGCAAGATATATGGGAGTTaGTCCTTCCAGGCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: VKVIAFLHSRLTRDTMHCKIYGS*SFQAEG
Trigger: TCCCTCTGCCTGGAAGGATCAACTCCCATATATCTT...GCAGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp GGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTGCTAATGGAAGGTGCTaGCAATATAATAGGCAACAC +
Preference number: 4 (lower is better)
Translates to: GSLSGGQSVSITLGSSAIANGRC*QYNRQH
Trigger: GTGTTGCCTATTATATTGGCAGCACCTTCCATTAGC...AATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR GCA 90 bp TCGCATGCTGGGTGTGCTGGTCCCCTGGGCCCACTGTTCTTTCTTTATACTTTGATTGCTAATGGAAGGTaGTGCCAATATAATAGGCAA +
Preference number: 4 (lower is better)
Translates to: SHAGCAGPLGPLFFLYTLIANGR*CQYNRQ
Trigger: TTGCCTATTATATTGGCAGCACCTTCCATTAGCAAT...CAAAGTATAAAGAAAGAACAGTGGGCCCAGGGGACCAGCACACCCAGCATGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp TCCCCTCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCCTTCCTTGCTTGAAATaGTTCAGAGGATCCCATTAT +
Preference number: 4 (lower is better)
Translates to: SPQVIRASTGTFQVTHKPLPCLK*FRGSHY
Trigger: ATAATGGGATCCTCTGAAGCATTTCAAGCAAGGAAG...GGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp GGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTAGGGCCATATCTTTCTaGCACACATATTTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: GSLSGGQSVSITLGSSAIRAISF*HTYFLH
Trigger: ATGGAGGAAATATGTGTGGCAGAAAGATATGGCCCT...AATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp GGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTAAGGTTTACTATACCTaGCCTAGTTCAGGGCCATAT +
Preference number: 4 (lower is better)
Translates to: GSLSGGQSVSITLGSSAIKVYYT*PSSGPY
Trigger: ATATGGCCCTGAACTAGGGCAGGTATAGTAAACCTT...AATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp TTTTCAAGTGACCCACAAGCCCTATATTTTAAACAGCCACAGAAGTCAGAACCAGAGATAGGAGAAAACTaGCCTGTGGCTGGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: FSSDPQALYFKQPQKSEPEIGEN*PVAGGE
Trigger: CTCGCCTCCAGCCACAGGGCAGTTTTCTCCTATCTC...TGGTTCTGACTTCTGTGGCTGTTTAAAATATAGGGCTTGTGGGTCACTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp CAATTTCCTGACCTCATGATCCGCCGTGCCCAGCCCTTATTTCTTAAGAATAGAACTGCAGCCTGGCACTaGAGAACGTTTTATCCAGAA +
Preference number: 4 (lower is better)
Translates to: QFPDLMIRRAQPLFLKNRTAAWH*RTFYPE
Trigger: TTCTGGATAAAACGTTCTGCAGTGCCAGGCTGCAGT...TCTATTCTTAAGAAATAAGGGCTGGGCACGGCGGATCATGAGGTCAGGAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506087.5
CDS-3UTR CCA 90 bp GGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTGTTTGTGTAATTTCCTaGGCACTTGTCCTCATTTGG +
Preference number: 4 (lower is better)
Translates to: GSLSGGQSVSITLGSSAIVCVIS*ALVLIW
Trigger: CCAAATGAGGACAAGTGCCCAGGAAATTACACAAAC...AATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR CCA 90 bp TCCCCTCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCGGTTCTAATGTCAGGTaGAAAAGTGTTGACTATGGA +
Preference number: 4 (lower is better)
Translates to: SPQVIRASTGTFQVTHKPGSNVR*KSVDYG
Trigger: TCCATAGTCAACACTTTTCCACCTGACATTAGAACC...GGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR CCA 90 bp CCTGACGTGGAGCTCCTACAGCATGTTGGGCCTACTGTCATTACTGCACTTAGCGCACTTCACTGCACCTaGCTATTTTGTATTTTTAGT +
Preference number: 4 (lower is better)
Translates to: PDVELLQHVGPTVITALSALHCT*LFCIFS
Trigger: ACTAAAAATACAAAATAGCCAGGTGCAGTGAAGTGC...GCTAAGTGCAGTAATGACAGTAGGCCCAACATGCTGTAGGAGCTCCACGTCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp TCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCTATATCTGCCATTACAGGGGTaGAAGAGACTGTGGCAGATA +
Preference number: 4 (lower is better)
Translates to: SSYPGFYRYFSSDPQALYLPLQG*KRLWQI
Trigger: TATCTGCCACAGTCTCTTCCACCCCTGTAATGGCAG...ATATAGGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp TCGCATGCTGGGTGTGCTGGTCCCCTGGGCCCACTGTTCTTTCTTTATACTTTGTTAGAAGGATATTGTTaGCTGCTTTTTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SHAGCAGPLGPLFFLYTLLEGYC*LLFVCV
Trigger: CACACACACAAAAAGCAGCCAACAATATCCTTCTAA...CAAAGTATAAAGAAAGAACAGTGGGCCCAGGGGACCAGCACACCCAGCATGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp TTTTCAAGTGACCCACAAGCCCTATATTTTAAACAGCCACAGAAGTCAGAACCAGGGTGGGGTGGGAAGTaGAGATTTTCTAGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: FSSDPQALYFKQPQKSEPGWGGK*RFSRSL
Trigger: CAGGGACCTAGAAAATCTCCACTTCCCACCCCACCC...TGGTTCTGACTTCTGTGGCTGTTTAAAATATAGGGCTTGTGGGTCACTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CAA 72 bp AGCCCCAACCCTGTGCTCACAGAAACATGTGCTGTATaGGATCAGTTTAATGGATTTAGGGCTGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: SPNPVLTETCAV*DQFNGFRAVQD
Trigger: ATCCTGCACAGCCCTAAATCCATTAAACTGATCCAATACAGCACATGTTTCTGTGAGCACAGGGTTGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp GGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTAGGATTATAACCGTCTaGACTTTCAATGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: GSLSGGQSVSITLGSSAIRIITV*TFNGFV
Trigger: CACAAACCCATTGAAAGTTCAGACGGTTATAATCCT...AATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR TCA 90 bp TTTTCAAGTGACCCACAAGCCCTATATTTTAAACAGCCACAGAAGTCAGAACCAGCTGCATGCACAGTATaGGGAGAAGCACTGTGTTGC +
Preference number: 4 (lower is better)
Translates to: FSSDPQALYFKQPQKSEPAACTV*GEALCC
Trigger: GCAACACAGTGCTTCTCCTCATACTGTGCATGCAGC...TGGTTCTGACTTCTGTGGCTGTTTAAAATATAGGGCTTGTGGGTCACTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR TCA 90 bp TTTTCAAGTGACCCACAAGCCCTATATTTTAAACAGCCACAGAAGTCAGAACCAGATTTTCTAGGTCCCTaGAGGCCACTGTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: FSSDPQALYFKQPQKSEPDFLGP*RPLSRL
Trigger: AAGCCTGGACAGTGGCCTTCAGGGACCTAGAAAATC...TGGTTCTGACTTCTGTGGCTGTTTAAAATATAGGGCTTGTGGGTCACTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp TTTTCAAGTGACCCACAAGCCCTATATTTTAAACAGCCACAGAAGTCAGAACCATTGCAAGACCTCAGGTaGTGCCTGGAGCCACAGATA +
Preference number: 4 (lower is better)
Translates to: FSSDPQALYFKQPQKSEPLQDLR*CLEPQI
Trigger: TATCTGTGGCTCCAGGCATCACCTGAGGTCTTGCAA...TGGTTCTGACTTCTGTGGCTGTTTAAAATATAGGGCTTGTGGGTCACTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp TACCTCTCCACCCAGGTCCTGCCTCACACTTTTGGTTCCAGCTATACACAGTGCTCAATGGTGTCTCCTTaGTTTTCAACAATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: YLSTQVLPHTFGSSYTQCSMVSP*FSTISS
Trigger: AGAAGAAATTGTTGAAAAGCAAGGAGACACCATTGA...GCACTGTGTATAGCTGGAACCAAAAGTGTGAGGCAGGACCTGGGTGGAGAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp GCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTGACATTGTCACTTCCTTaGTTGAAATGCTTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: AACQVVSQSQLLWVPLQLTLSLP*LKCFRG
Trigger: TCCTCTGAAGCATTTCAAGCAAGGAAGTGACAATGT...CAATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp TCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCTATATCCTGCCTCACACTTTTaGTTCCAGCTATACACAGTG +
Preference number: 4 (lower is better)
Translates to: SSYPGFYRYFSSDPQALYPASHF*FQLYTV
Trigger: CACTGTGTATAGCTGGAACCAAAAGTGTGAGGCAGG...ATATAGGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp TTTTCAAGTGACCCACAAGCCCTATATTTTAAACAGCCACAGAAGTCAGAACCATCTTGTCACCCAGGCTaGAGTACAGCTGTGCGATCT +
Preference number: 4 (lower is better)
Translates to: FSSDPQALYFKQPQKSEPSCHPG*STAVRS
Trigger: AGATCGCACAGCTGTACTCCAGCCTGGGTGACAAGA...TGGTTCTGACTTCTGTGGCTGTTTAAAATATAGGGCTTGTGGGTCACTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp CAATTTCCTGACCTCATGATCCGCCGTGCCCAGCCCTTATTTCTTAAGAATAGACAGGTACTTTTCAAGTaGCCCACAAGCCCTATATTT +
Preference number: 4 (lower is better)
Translates to: QFPDLMIRRAQPLFLKNRQVLFK*PTSPIF
Trigger: AAATATAGGGCTTGTGGGTCACTTGAAAAGTACCTG...TCTATTCTTAAGAAATAAGGGCTGGGCACGGCGGATCATGAGGTCAGGAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR TCA 90 bp TCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCTATATTACAGGAACAGGCTTTaGGCATGTGTGAGCATAGTT +
Preference number: 4 (lower is better)
Translates to: SSYPGFYRYFSSDPQALYYRNRL*ACVSIV
Trigger: AACTATGCTCACACATGCTCAAAGCCTGTTCCTGTA...ATATAGGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp GCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTGAAAACTGTAGGAATTTaGATAGTAGATCACCTGGTG +
Preference number: 4 (lower is better)
Translates to: AACQVVSQSQLLWVPLQLKTVGI*IVDHLV
Trigger: CACCAGGTGATCTACTATGCAAATTCCTACAGTTTT...CAATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR GCA 90 bp GCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTGATTGCTAATGGAAGGTaGTGCCAATATAATAGGCAA +
Preference number: 4 (lower is better)
Translates to: AACQVVSQSQLLWVPLQLIANGR*CQYNRQ
Trigger: TTGCCTATTATATTGGCAGCACCTTCCATTAGCAAT...CAATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR GCA 90 bp AGGATGTGCCTTGTTAACAATATGTTTGCAGGTGGTATGCTTGGTAAAAGTCATAGCTGGGATTACAGGTaGACTTCACTGCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: RMCLVNNMFAGGMLGKSHSWDYR*TSLHLA
Trigger: AGCCAGGTGCAGTGAAGTGCACCTGTAATCCCAGCT...ATGACTTTTACCAAGCATACCACCTGCAAACATATTGTTAACAAGGCACATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp AGGATGTGCCTTGTTAACAATATGTTTGCAGGTGGTATGCTTGGTAAAAGTCATCTGGAGCCACAGGTCTaGAGGGGAATCATTGCAAGA +
Preference number: 4 (lower is better)
Translates to: RMCLVNNMFAGGMLGKSHLEPQV*RGIIAR
Trigger: TCTTGCAATGATTCCCCTGCAGACCTGTGGCTCCAG...ATGACTTTTACCAAGCATACCACCTGCAAACATATTGTTAACAAGGCACATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp TTTTCAAGTGACCCACAAGCCCTATATTTTAAACAGCCACAGAAGTCAGAACCAGGAGGCGAGATATGCTaGCAGCAATACTGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: FSSDPQALYFKQPQKSEPGGEIC*QQYCSV
Trigger: AACAGAGCAGTATTGCTGCCAGCATATCTCGCCTCC...TGGTTCTGACTTCTGTGGCTGTTTAAAATATAGGGCTTGTGGGTCACTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CAA 72 bp GCCCCGGCAATGGCTGTATCTAAAAGAAACAGGTATTaGCCCTCCATAAGTCAAATAGATGTGGCCAAATCA +
Preference number: 4 (lower is better)
Translates to: APAMAVSKRNRY*PSISQIDVAKS
Trigger: TGATTTGGCCACATCTATTTGACTTATGGAGGGCAAATACCTGTTTCTTTTAGATACAGCCATTGCCGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CAA 72 bp CTAGCCTACATGCACATCCGGACACAGTACCTTTCCTaGAACTTATTCATGATACAGATTCCTTTGCTCACG +
Preference number: 4 (lower is better)
Translates to: LAYMHIRTQYLS*NLFMIQIPLLT
Trigger: CGTGAGCAAAGGAATCTGTATCATGAATAAGTTCAAGGAAAGGTACTGTGTCCGGATGTGCATGTAGGCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp TTTTCAAGTGACCCACAAGCCCTATATTTTAAACAGCCACAGAAGTCAGAACCATCAACGCAAGTCTCTTaGGATGCCTTGTTGATCGGT +
Preference number: 4 (lower is better)
Translates to: FSSDPQALYFKQPQKSEPSTQVS*DALLIG
Trigger: ACCGATCAACAAGGCATCTCAAGAGACTTGCGTTGA...TGGTTCTGACTTCTGTGGCTGTTTAAAATATAGGGCTTGTGGGTCACTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR GCA 90 bp GGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTAAAAGAGGAGACGTATaGATTCATCTCCAATTTAAG +
Preference number: 4 (lower is better)
Translates to: GSLSGGQSVSITLGSSAIKRGDV*IHLQFK
Trigger: CTTAAATTGGAGATGAATGCATACGTCTCCTCTTTT...AATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp GCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTGTCTATAAAAGCTATATaGTCCATGATGTCATCCAAC +
Preference number: 4 (lower is better)
Translates to: AACQVVSQSQLLWVPLQLSIKAI*SMMSSN
Trigger: GTTGGATGACATCATGGACCATATAGCTTTTATAGA...CAATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR CCA 90 bp TCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCTATATAGAATGCCCCGGCAATaGCTGTATCTAAAAGAAACA +
Preference number: 4 (lower is better)
Translates to: SSYPGFYRYFSSDPQALYRMPRQ*LYLKET
Trigger: TGTTTCTTTTAGATACAGCCATTGCCGGGGCATTCT...ATATAGGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp TTTTCAAGTGACCCACAAGCCCTATATTTTAAACAGCCACAGAAGTCAGAACCAGAAGATTATAGTGGCTaGGGAAGTAGCATTGGGGGT +
Preference number: 4 (lower is better)
Translates to: FSSDPQALYFKQPQKSEPEDYSG*GSSIGG
Trigger: ACCCCCAATGCTACTTCCCCAGCCACTATAATCTTC...TGGTTCTGACTTCTGTGGCTGTTTAAAATATAGGGCTTGTGGGTCACTTGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp AGGATGTGCCTTGTTAACAATATGTTTGCAGGTGGTATGCTTGGTAAAAGTCATAGCCTCCTGAATAGCTaGGATTACAGACACGTGCCA +
Preference number: 4 (lower is better)
Translates to: RMCLVNNMFAGGMLGKSHSLLNS*DYRHVP
Trigger: TGGCACGTGTCTGTAATCCCAGCTATTCAGGAGGCT...ATGACTTTTACCAAGCATACCACCTGCAAACATATTGTTAACAAGGCACATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR TCA 90 bp CAATTTCCTGACCTCATGATCCGCCGTGCCCAGCCCTTATTTCTTAAGAATAGATACAATTTGAAACAATaGCACACTCATCAGATGGGT +
Preference number: 4 (lower is better)
Translates to: QFPDLMIRRAQPLFLKNRYNLKQ*HTHQMG
Trigger: ACCCATCTGATGAGTGTGTCATTGTTTCAAATTGTA...TCTATTCTTAAGAAATAAGGGCTGGGCACGGCGGATCATGAGGTCAGGAAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp AGGATGTGCCTTGTTAACAATATGTTTGCAGGTGGTATGCTTGGTAAAAGTCATACAGTGTCTCATTGTTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: RMCLVNNMFAGGMLGKSHTVSHC*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGGCAACAATGAGACACTGT...ATGACTTTTACCAAGCATACCACCTGCAAACATATTGTTAACAAGGCACATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CCA 90 bp TCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCTATATCTTGAAAAAGATATATaGGAGTTGATCCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSYPGFYRYFSSDPQALYLEKDI*ELILPG
Trigger: GCCTGGAAGGATCAACTCCCATATATCTTTTTCAAG...ATATAGGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CAA 72 bp AACTACCATCTGATCCTGCTGAAACTAAAACTGACATaGTCACTTCCTTGCTTGAAATGCTTCAGAGGATCC +
Preference number: 4 (lower is better)
Translates to: NYHLILLKLKLT*SLPCLKCFRGS
Trigger: GGATCCTCTGAAGCATTTCAAGCAAGGAAGTGACAATGTCAGTTTTAGTTTCAGCAGGATCAGATGGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CAA 72 bp GGGCCATATCTTTCTGCCACACATATTTCCTCCATATaGAACTACCATCTGATCCTGCTGAAACTAAAACTG +
Preference number: 4 (lower is better)
Translates to: GPYLSATHISSI*NYHLILLKLKL
Trigger: CAGTTTTAGTTTCAGCAGGATCAGATGGTAGTTCAATATGGAGGAAATATGTGTGGCAGAAAGATATGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CAA 72 bp AGGAAGGGAGAAGAATTAGAGATAGGCTTCCCTGGTTaGCGAATGAAACAATTTTCCTTAGGAAACCTAGAG +
Preference number: 4 (lower is better)
Translates to: RKGEELEIGFPG*RMKQFSLGNLE
Trigger: CTCTAGGTTTCCTAAGGAAAATTGTTTCATTCGCAAACCAGGGAAGCCTATCTCTAATTCTTCTCCCTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp CAATTTCCTGACCTCATGATCCGCCGTGCCCAGCCCTTATTTCTTAAGAATAGATCAATGGTGTCTCCTTaGTTTTCAACAATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: QFPDLMIRRAQPLFLKNRSMVSP*FSTISS
Trigger: AGAAGAAATTGTTGAAAAGCAAGGAGACACCATTGA...TCTATTCTTAAGAAATAAGGGCTGGGCACGGCGGATCATGAGGTCAGGAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR TCA 90 bp TTTTCAAGTGACCCACAAGCCCTATATTTTAAACAGCCACAGAAGTCAGAACCATTGGCTTTTACTGAATaGAAAAGGGAACCATCAGAG +
Preference number: 4 (lower is better)
Translates to: FSSDPQALYFKQPQKSEPLAFTE*KREPSE
Trigger: CTCTGATGGTTCCCTTTTTCATTCAGTAAAAGCCAA...TGGTTCTGACTTCTGTGGCTGTTTAAAATATAGGGCTTGTGGGTCACTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CAA 72 bp GATCCTGCTGAAACTAAAACTGACATTGTCACTTCCTaGCTTGAAATGCTTCAGAGGATCCCATTATCAACA +
Preference number: 4 (lower is better)
Translates to: DPAETKTDIVTS*LEMLQRIPLST
Trigger: TGTTGATAATGGGATCCTCTGAAGCATTTCAAGCAAGGAAGTGACAATGTCAGTTTTAGTTTCAGCAGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CAA 72 bp TGTGCCTTGTTAACAATATGTTTGCAGGTGGTATGCTaGGTAAAAGTCATCGCCTTTCTCCATTCTCGATTA +
Preference number: 4 (lower is better)
Translates to: CALLTICLQVVC*VKVIAFLHSRL
Trigger: TAATCGAGAATGGAGAAAGGCGATGACTTTTACCAAGCATACCACCTGCAAACATATTGTTAACAAGGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
3UTR CAA 72 bp CTGCTGAAACTAAAACTGACATTGTCACTTCCTTGCTaGAAATGCTTCAGAGGATCCCATTATCAACAAGAT +
Preference number: 4 (lower is better)
Translates to: LLKLKLTLSLPC*KCFRGSHYQQD
Trigger: ATCTTGTTGATAATGGGATCCTCTGAAGCATTTCAAGCAAGGAAGTGACAATGTCAGTTTTAGTTTCAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR GCA 90 bp AGGATGTGCCTTGTTAACAATATGTTTGCAGGTGGTATGCTTGGTAAAAGTCATAAAACTGTAGGAATTTaGATAGTAGATCACCTGGTG +
Preference number: 4 (lower is better)
Translates to: RMCLVNNMFAGGMLGKSHKTVGI*IVDHLV
Trigger: CACCAGGTGATCTACTATGCAAATTCCTACAGTTTT...ATGACTTTTACCAAGCATACCACCTGCAAACATATTGTTAACAAGGCACATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp TGCGGAAAGCCGCAGGGACCTCTGCCCAAGAAAGCCTGGGTATTGTCCAAGGTTGAAAGAAAGGCGCCATaGCACTCCAGCCTGGGCGAC +
Preference number: 5 (lower is better)
Translates to: CGKPQGPLPKKAWVLSKVERKAP*HSSLGD
Trigger: GTCGCCCAGGCTGGAGTGCAATGGCGCCTTTCTTTC...AACCTTGGACAATACCCAGGCTTTCTTGGGCAGAGGTCCCTGCGGCTTTCCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp TCGCATGCTGGGTGTGCTGGTCCCCTGGGCCCACTGTTCTTTCTTTATACTTTGCCTCTCACGTTCTACTaGGCTGACAGCCCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: SHAGCAGPLGPLFFLYTLPLTFY*ADSPGL
Trigger: CAGACCTGGGCTGTCAGCCAAGTAGAACGTGAGAGG...CAAAGTATAAAGAAAGAACAGTGGGCCCAGGGGACCAGCACACCCAGCATGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp AAAAGCTGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACGTTCCCCGTGGCAGCTaGTCAGGTGGTCAGTCAGTC +
Preference number: 5 (lower is better)
Translates to: KSCSSPWQLVRWSVSLNYVPRGS*SGGQSV
Trigger: GACTGACTGACCACCTGACAAGCTGCCACGGGGAAC...GTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCAGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR CAA 90 bp TCCCCTCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCCCTCTCACGTTCTACTaGGCTGACAGCCCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: SPQVIRASTGTFQVTHKPPLTFY*ADSPGL
Trigger: CAGACCTGGGCTGTCAGCCAAGTAGAACGTGAGAGG...GGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGAGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR CAA 90 bp GCCATTACAGGGGTGGAAGAGACTGTGGCAGATAGCTCAGCTGGGGACATGTTCAGGCAGGAGAATTGCTaGAACCCGGTAGAAGGAGGT +
Preference number: 5 (lower is better)
Translates to: AITGVEETVADSSAGDMFRQENC*NPVEGG
Trigger: ACCTCCTTCTACCGGGTTCAAGCAATTCTCCTGCCT...GAACATGTCCCCAGCTGAGCTATCTGCCACAGTCTCTTCCACCCCTGTAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp GCCATTACAGGGGTGGAAGAGACTGTGGCAGATAGCTCAGCTGGGGACATGTTCTGCAGTGGCACCATCTaGGTTCACTGCAATCTCTGC +
Preference number: 5 (lower is better)
Translates to: AITGVEETVADSSAGDMFCSGTI*VHCNLC
Trigger: GCAGAGATTGCAGTGAACCAAGATGGTGCCACTGCA...GAACATGTCCCCAGCTGAGCTATCTGCCACAGTCTCTTCCACCCCTGTAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp GCCATTACAGGGGTGGAAGAGACTGTGGCAGATAGCTCAGCTGGGGACATGTTCAGGAGAAGCACTGTGTaGCCAGAGGACTGTATCATC +
Preference number: 5 (lower is better)
Translates to: AITGVEETVADSSAGDMFRRSTV*PEDCII
Trigger: GATGATACAGTCCTCTGGCAACACAGTGCTTCTCCT...GAACATGTCCCCAGCTGAGCTATCTGCCACAGTCTCTTCCACCCCTGTAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp CCTGACGTGGAGCTCCTACAGCATGTTGGGCCTACTGTCATTACTGCACTTAGCTGGGGGTGCCAAGAATaGGTTGGACTCTGGGTATGT +
Preference number: 5 (lower is better)
Translates to: PDVELLQHVGPTVITALSWGCQE*VGLWVC
Trigger: ACATACCCAGAGTCCAACCAATTCTTGGCACCCCCA...GCTAAGTGCAGTAATGACAGTAGGCCCAACATGCTGTAGGAGCTCCACGTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp TCGCATGCTGGGTGTGCTGGTCCCCTGGGCCCACTGTTCTTTCTTTATACTTTGAAGCAAGAGAATCACTaGAACCTGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: SHAGCAGPLGPLFFLYTLKQENH*NLGGGG
Trigger: ACCTCCGCCTCCCAGGTTCAAGTGATTCTCTTGCTT...CAAAGTATAAAGAAAGAACAGTGGGCCCAGGGGACCAGCACACCCAGCATGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp TGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGATCAACGCAAGTCTCTaGAGATGCCTTGTTGATCGG +
Preference number: 5 (lower is better)
Translates to: CSSPWQLVRWSVSLNYSGINASL*RCLVDR
Trigger: CCGATCAACAAGGCATCTCAAGAGACTTGCGTTGAT...CCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR CAA 90 bp CAATTTCCTGACCTCATGATCCGCCGTGCCCAGCCCTTATTTCTTAAGAATAGAGTTCCCCGTGGCAGCTaGTCAGGTGGTCAGTCAGTC +
Preference number: 5 (lower is better)
Translates to: QFPDLMIRRAQPLFLKNRVPRGS*SGGQSV
Trigger: GACTGACTGACCACCTGACAAGCTGCCACGGGGAAC...TCTATTCTTAAGAAATAAGGGCTGGGCACGGCGGATCATGAGGTCAGGAAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR CAA 90 bp AAAAGCTGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACGACAGTGTCTCATTGTaGCCCAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: KSCSSPWQLVRWSVSLNYDSVSL*PRLVSN
Trigger: GTTTGAGACCAGCCTGGGCAACAATGAGACACTGTC...GTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCAGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp GCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTGGCTGGGGAAGTAGCATaGGGGGTGCCAAGAATTGGT +
Preference number: 5 (lower is better)
Translates to: AACQVVSQSQLLWVPLQLAGEVA*GVPRIG
Trigger: ACCAATTCTTGGCACCCCCAATGCTACTTCCCCAGC...CAATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp GCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTGAGGAAGGAGAATTGCTaGAACCTGGGCAGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: AACQVVSQSQLLWVPLQLRKENC*NLGSGG
Trigger: ACCTCCGCTGCCCAGGTTCAAGCAATTCTCCTTCCT...CAATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp AAAAGCTGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACAGGAGAAGCACTGTGTaGCCAGAGGACTGTATCATC +
Preference number: 5 (lower is better)
Translates to: KSCSSPWQLVRWSVSLNYRRSTV*PEDCII
Trigger: GATGATACAGTCCTCTGGCAACACAGTGCTTCTCCT...GTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR CAA 90 bp AAAAGCTGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACAGCTCCTACAGCATGTaGGGCCTACTGTCATTACTG +
Preference number: 5 (lower is better)
Translates to: KSCSSPWQLVRWSVSLNYSSYSM*GLLSLL
Trigger: CAGTAATGACAGTAGGCCCAACATGCTGTAGGAGCT...GTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp TGCGGAAAGCCGCAGGGACCTCTGCCCAAGAAAGCCTGGGTATTGTCCAAGGTTATAGGCTTCCCTGGTTaGCGAATGAAACAATTTTCC +
Preference number: 5 (lower is better)
Translates to: CGKPQGPLPKKAWVLSKVIGFPG*RMKQFS
Trigger: GGAAAATTGTTTCATTCGCAAACCAGGGAAGCCTAT...AACCTTGGACAATACCCAGGCTTTCTTGGGCAGAGGTCCCTGCGGCTTTCCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp TCCCCTCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCAAGAAAGCCTGGGTATaGTCCAAGGTTTCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: SPQVIRASTGTFQVTHKPKKAWV*SKVSSH
Trigger: GTGGGAGGAAACCTTGGACAATACCCAGGCTTTCTT...GGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp TCGCATGCTGGGTGTGCTGGTCCCCTGGGCCCACTGTTCTTTCTTTATACTTTGTTGCAGGTGGTATGCTaGGTAAAAGTCATCGCCTTT +
Preference number: 5 (lower is better)
Translates to: SHAGCAGPLGPLFFLYTLLQVVC*VKVIAF
Trigger: AAAGGCGATGACTTTTACCAAGCATACCACCTGCAA...CAAAGTATAAAGAAAGAACAGTGGGCCCAGGGGACCAGCACACCCAGCATGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp GTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGGGACACAATGCACTGCTACAGCTGTGCGATCTaGGCTCACTGCAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: VKVIAFLHSRLTRDTMHCYSCAI*AHCNLH
Trigger: GTGGAGGTTGCAGTGAGCCAAGATCGCACAGCTGTA...GCAGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp GCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTGTTACTCAGCAGCGCATaGTGTCGCTTCAGGTATTCA +
Preference number: 5 (lower is better)
Translates to: AACQVVSQSQLLWVPLQLLLSSA*CRFRYS
Trigger: TGAATACCTGAAGCGACACAATGCGCTGCTGAGTAA...CAATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR CAA 90 bp TGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGACTGCATCAGCTGTTTaGCTACTTCTGATACTTAGT +
Preference number: 5 (lower is better)
Translates to: CSSPWQLVRWSVSLNYSGTASAV*LLLILS
Trigger: ACTAAGTATCAGAAGTAGCAAAACAGCTGATGCAGT...CCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp AAAAGCTGCAGTTCCCCGTGGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTGTGCAGGATGTGCCTaGTTAACAATATGTTTGCAG +
Preference number: 5 (lower is better)
Translates to: KSCSSPWQLVRWSVSLNYCAGCA*LTICLQ
Trigger: CTGCAAACATATTGTTAACAAGGCACATCCTGCACA...GTAATTGAGACTGACTGACCACCTGACAAGCTGCCACGGGGAACTGCAGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp GTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGGGACACAATGCACTGCATTGTTGGCTGCTTTTaGTGTGTGTGCATGGGGCTG +
Preference number: 5 (lower is better)
Translates to: VKVIAFLHSRLTRDTMHCIVGCF*CVCMGL
Trigger: CAGCCCCATGCACACACACAAAAAGCAGCCAACAAT...GCAGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp TCCCCTCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCATTCATCAACGTATATaGAGTGCCTACTTTGTGCCA +
Preference number: 5 (lower is better)
Translates to: SPQVIRASTGTFQVTHKPIHQRI*SAYFVP
Trigger: TGGCACAAAGTAGGCACTCAATATACGTTGATGAAT...GGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp TCAAGTTATCCGGGCTTCTACAGGTACTTTTCAAGTGACCCACAAGCCCTATATATCAACGCAAGTCTCTaGAGATGCCTTGTTGATCGG +
Preference number: 5 (lower is better)
Translates to: SSYPGFYRYFSSDPQALYINASL*RCLVDR
Trigger: CCGATCAACAAGGCATCTCAAGAGACTTGCGTTGAT...ATATAGGGCTTGTGGGTCACTTGAAAAGTACCTGTAGAAGCCCGGATAACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR CAA 90 bp GCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTGGAAAACTGTAGGAATTaGCATAGTAGATCACCTGGT +
Preference number: 5 (lower is better)
Translates to: AACQVVSQSQLLWVPLQLENCRN*HSRSPG
Trigger: ACCAGGTGATCTACTATGCAAATTCCTACAGTTTTC...CAATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR CAA 90 bp GTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGGGACACAATGCACTGCTTGTCACTTCCTTGCTaGAAATGCTTCAGAGGATCC +
Preference number: 5 (lower is better)
Translates to: VKVIAFLHSRLTRDTMHCLSLPC*KCFRGS
Trigger: GGATCCTCTGAAGCATTTCAAGCAAGGAAGTGACAA...GCAGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp GTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGGGACACAATGCACTGCGACATTGTCACTTCCTaGCTTGAAATGCTTCAGAGG +
Preference number: 5 (lower is better)
Translates to: VKVIAFLHSRLTRDTMHCDIVTS*LEMLQR
Trigger: CCTCTGAAGCATTTCAAGCAAGGAAGTGACAATGTC...GCAGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp GCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTGCATATTTCCTCCATATaGAACTACCATCTGATCCTG +
Preference number: 5 (lower is better)
Translates to: AACQVVSQSQLLWVPLQLHISSI*NYHLIL
Trigger: CAGGATCAGATGGTAGTTCAATATGGAGGAAATATG...CAATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp CAATTTCCTGACCTCATGATCCGCCGTGCCCAGCCCTTATTTCTTAAGAATAGATCAGGTGGAAAAGTGTaGACTATGGAGTTGTTTAGC +
Preference number: 5 (lower is better)
Translates to: QFPDLMIRRAQPLFLKNRSGGKV*TMELFS
Trigger: GCTAAACAACTCCATAGTCAACACTTTTCCACCTGA...TCTATTCTTAAGAAATAAGGGCTGGGCACGGCGGATCATGAGGTCAGGAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR CAA 90 bp GGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTTTAAAATCGATTGTCTaGTTAGACTTCCCCTATCCA +
Preference number: 5 (lower is better)
Translates to: GSLSGGQSVSITLGSSAILKSIV*LDFPYP
Trigger: TGGATAGGGGAAGTCTAACAAGACAATCGATTTTAA...AATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR CAA 90 bp GGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTACACAGTACCTTTCCTaGAACTTATTCATGATACAG +
Preference number: 5 (lower is better)
Translates to: GSLSGGQSVSITLGSSAITQYLS*NLFMIQ
Trigger: CTGTATCATGAATAAGTTCAAGGAAAGGTACTGTGT...AATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp GGCAGCTTGTCAGGTGGTCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTAAGGAACCTGTGGCTTaGTTCATAATAGAAATTCAG +
Preference number: 5 (lower is better)
Translates to: GSLSGGQSVSITLGSSAIKEPVA*FIIEIQ
Trigger: CTGAATTTCTATTATGAACAAAGCCACAGGTTCCTT...AATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGACCACCTGACAAGCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506087.5
CDS-3UTR CAA 90 bp CAATTTCCTGACCTCATGATCCGCCGTGCCCAGCCCTTATTTCTTAAGAATAGAGAAAACTGTAGGAATTaGCATAGTAGATCACCTGGT +
Preference number: 5 (lower is better)
Translates to: QFPDLMIRRAQPLFLKNRENCRN*HSRSPG
Trigger: ACCAGGTGATCTACTATGCAAATTCCTACAGTTTTC...TCTATTCTTAAGAAATAAGGGCTGGGCACGGCGGATCATGAGGTCAGGAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS-3UTR CAA 90 bp TTTTCAAGTGACCCACAAGCCCTATATTTTAAACAGCCACAGAAGTCAGAACCATGTGGAAGGAAGCTATaGGTGACCTTGCCAAGAACA +
Preference number: 5 (lower is better)
Translates to: FSSDPQALYFKQPQKSEPCGRKL*VTLPRT
Trigger: TGTTCTTGGCAAGGTCACCAATAGCTTCCTTCCACA...TGGTTCTGACTTCTGTGGCTGTTTAAAATATAGGGCTTGTGGGTCACTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp GTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGGGACACAATGCACTGCTTAAAATCGATTGTCTaGTTAGACTTCCCCTATCCA +
Preference number: 5 (lower is better)
Translates to: VKVIAFLHSRLTRDTMHCLKSIV*LDFPYP
Trigger: TGGATAGGGGAAGTCTAACAAGACAATCGATTTTAA...GCAGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp GTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGGGACACAATGCACTGCAAGAGAGAGATCAGATaGTTACTGTGTCTATGTAGA +
Preference number: 5 (lower is better)
Translates to: VKVIAFLHSRLTRDTMHCKREIR*LLCLCR
Trigger: TCTACATAGACACAGTAACAATCTGATCTCTCTCTT...GCAGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp TTTTCAAGTGACCCACAAGCCCTATATTTTAAACAGCCACAGAAGTCAGAACCAGGTGCCAAGAATTGGTaGGACTCTGGGTATGTTTTA +
Preference number: 5 (lower is better)
Translates to: FSSDPQALYFKQPQKSEPGAKNW*DSGYVL
Trigger: TAAAACATACCCAGAGTCCAACCAATTCTTGGCACC...TGGTTCTGACTTCTGTGGCTGTTTAAAATATAGGGCTTGTGGGTCACTTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp GTAAAAGTCATCGCCTTTCTCCATTCTCGATTAACCAGGGACACAATGCACTGCTGTTTTAGAAGGATATaGTTGGCTGCTTTTTGTGTG +
Preference number: 5 (lower is better)
Translates to: VKVIAFLHSRLTRDTMHCCFRRI*LAAFCV
Trigger: CACACAAAAAGCAGCCAACAATATCCTTCTAAAACA...GCAGTGCATTGTGTCCCTGGTTAATCGAGAATGGAGAAAGGCGATGACTTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS-3UTR CAA 90 bp TTTTCAAGTGACCCACAAGCCCTATATTTTAAACAGCCACAGAAGTCAGAACCAAAGCTATTGGTGACCTaGCCAAGAACAGTTTCAGTA +
Preference number: 5 (lower is better)
Translates to: FSSDPQALYFKQPQKSEPKLLVT*PRTVSV
Trigger: TACTGAAACTGTTCTTGGCAAGGTCACCAATAGCTT...TGGTTCTGACTTCTGTGGCTGTTTAAAATATAGGGCTTGTGGGTCACTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS CCA 90 bp AAGGATTATAACCGTCTGAACTTTCAATGGGTTTGTGTAATTTCCTaGGCACTTGTCCTCATTTGGATTAGGATAAGAACAAAGCACACC +
Preference number: 5 (lower is better)
Translates to: KDYNRLNFQWVCVIS*ALVLIWIRIRTKHT
Trigger: GGTGTGCTTTGTTCTTATCCTAATCCAAATGAGGACAAGTGCCCAGGAAATTACACAAACCCATTGAAAGTTCAGACGGTTATAATCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306480.11
ENST00000505095.1
ENST00000506087.5
CDS-3UTR CAA 90 bp AGGATGTGCCTTGTTAACAATATGTTTGCAGGTGGTATGCTTGGTAAAAGTCATTTTAGAAGGATATTGTaGGCTGCTTTTTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: RMCLVNNMFAGGMLGKSHFRRIL*AAFCVC
Trigger: ACACACACAAAAAGCAGCCAACAATATCCTTCTAAA...ATGACTTTTACCAAGCATACCACCTGCAAACATATTGTTAACAAGGCACATCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306480.11
CDS GCA 72 bp TCAGTCAGTCTCAATTACTCTGGGTTCCTCTGCAATTaGTGTCATGACCGTGAGCCTCTCACGTTCTACTTG +
Preference number: 6 (lower is better)
Translates to: SVSLNYSGFLCN*CHDREPLTFYL
Trigger: CAAGTAGAACGTGAGAGGCTCACGGTCATGACAGCAATTGCAGAGGAACCCAGAGTAATTGAGACTGACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306480.11
ENST00000506087.5
CDS CCA 72 bp AACCGTCTGAACTTTCAATGGGTTTGTGTAATTTCCTaGGCACTTGTCCTCATTTGGATTAGGATAAGAACA +
Preference number: 6 (lower is better)
Translates to: NRLNFQWVCVIS*ALVLIWIRIRT
Trigger: TGTTCTTATCCTAATCCAAATGAGGACAAGTGCCCAGGAAATTACACAAACCCATTGAAAGTTCAGACGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306480.11
ENST00000505095.1
ENST00000506087.5