RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM185B (Homo sapiens)

Ensembl gene IDs: ENSG00000226479

Ensembl transcript IDs: ENST00000426077.3

Found 331 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGCCCTGGCAGGGCCAGGTGGGGATGGCCTCCCTCACCGTCTGCTaGTTCTACCTACATGGCTGGGCTCCCTGCGCCCAGGCTTCGCCT +
Preference number: 1 (lower is better)
Translates to: GPWQGQVGMASLTVC*FYLHGWAPCAQASP
Trigger: AGGCGAAGCCTGGGCGCAGGGAGCCCAGCCATGTAGGTAGAAGCAGCAGACGGTGAGGGAGGCCATCCCCACCTGGCCCTGCCAGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 90 bp GCCTCCCTCACCGTCTGCTGCTTCTACCTACATGGCTGGGCTCCCTaGGCCCAGGCTTCGCCTTTCCAAAGCGCCTTGCATAGCCCTCCG +
Preference number: 1 (lower is better)
Translates to: ASLTVCCFYLHGWAP*AQASPFQSALHSPP
Trigger: CGGAGGGCTATGCAAGGCGCTTTGGAAAGGCGAAGCCTGGGCGCAGGGAGCCCAGCCATGTAGGTAGAAGCAGCAGACGGTGAGGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR TCA 90 bp CACCCACTGCTGCTCAGGGCTGCCGGCTGGTGTAAACTGCCAGTGTaGGAGAGACAGAGCGAGCTCCCTCAGACAGCGAGCTCAATCCCA +
Preference number: 1 (lower is better)
Translates to: HPLLLRAAGWCKLPV*ERQSELPQTASSIP
Trigger: TGGGATTGAGCTCGCTGTCTGAGGGAGCTCGCTCTGTCTCTCTCACACTGGCAGTTTACACCAGCCGGCAGCCCTGAGCAGCAGTGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 90 bp CACCGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCCACTaGATCCCCACTGCCTGGCACCATGCTTGGCTCGGGGTAGGTCTT +
Preference number: 1 (lower is better)
Translates to: HRTGHFAWAGLFALH*IPTAWHHAWLGVGL
Trigger: AAGACCTACCCCGAGCCAAGCATGGTGCCAGGCAGTGGGGATGCAGTGGAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 90 bp GCAGCAGCAGGGGTGCAGCTGGAGGCTCCCTTTTTGTGGGTGTCATaGTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGCAA +
Preference number: 1 (lower is better)
Translates to: AAAGVQLEAPFLWVS*CQWWWLWQVLHLQQ
Trigger: TTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACCCACAAAAAGGGAGCCTCCAGCTGCACCCCTGCTGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CCA 90 bp CATGGCAGACAGCTGAGGAAGTACTCGCAGCAGCAGGGGTGCAGCTaGAGGCTCCCTTTTTGTGGGTGTCATGCTGTCAGTGGTGGTGGC +
Preference number: 1 (lower is better)
Translates to: HGRQLRKYSQQQGCS*RLPFCGCHAVSGGG
Trigger: GCCACCACCACTGACAGCATGACACCCACAAAAAGGGAGCCTCCAGCTGCACCCCTGCTGCTGCGAGTACTTCCTCAGCTGTCTGCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 90 bp CCTTTTTGTGGGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTaGTGCATCTCCAGCAAATGGTCCCTGTGGTGCAGCCCTGCCTGG +
Preference number: 1 (lower is better)
Translates to: PFCGCHAVSGGGCGK*CISSKWSLWCSPAW
Trigger: CCAGGCAGGGCTGCACCACAGGGACCATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACCCACAAAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CCA 90 bp GGGGTGCAGCTGGAGGCTCCCTTTTTGTGGGTGTCATGCTGTCAGTaGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGCAAATGGTCCCT +
Preference number: 1 (lower is better)
Translates to: GVQLEAPFLWVSCCQ*WWLWQVLHLQQMVP
Trigger: AGGGACCATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACCCACAAAAAGGGAGCCTCCAGCTGCACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 90 bp AAAAGTTACACCCACTGCTGCTCAGGGCTGCCGGCTGGTGTAAACTaGCAGTGTGAGAGAGACAGAGCGAGCTCCCTCAGACAGCGAGCT +
Preference number: 1 (lower is better)
Translates to: KSYTHCCSGLPAGVN*QCERDRASSLRQRA
Trigger: AGCTCGCTGTCTGAGGGAGCTCGCTCTGTCTCTCTCACACTGGCAGTTTACACCAGCCGGCAGCCCTGAGCAGCAGTGGGTGTAACTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 90 bp TCCCTTTGTGGGTGCAGCTCACACTTCTCACCGTACAGGACACTTTaGATGGGCAGGGCTGTTTGCTCTCCACTGCATCCCCACTGCCTG +
Preference number: 1 (lower is better)
Translates to: SLCGCSSHFSPYRTL*MGRAVCSPLHPHCL
Trigger: CAGGCAGTGGGGATGCAGTGGAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAGCTGCACCCACAAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 90 bp TGGCAAGTGCTGCATCTCCAGCAAATGGTCCCTGTGGTGCAGCCCTaGCTGGGTTTCCAGCCACACAACTTCCCGGATCCCTGTGAACTT +
Preference number: 1 (lower is better)
Translates to: WQVLHLQQMVPVVQP*LGFQPHNFPDPCEL
Trigger: AAGTTCACAGGGATCCGGGAAGTTGTGTGGCTGGAAACCCAGGCAGGGCTGCACCACAGGGACCATTTGCTGGAGATGCAGCACTTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 90 bp TTTTGTGGGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTaGATCTCCAGCAAATGGTCCCTGTGGTGCAGCCCTGCCTGGGTT +
Preference number: 1 (lower is better)
Translates to: FCGCHAVSGGGCGKC*ISSKWSLWCSPAWV
Trigger: AACCCAGGCAGGGCTGCACCACAGGGACCATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACCCACAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CCA 90 bp CAGCTGGAGGCTCCCTTTTTGTGGGTGTCATGCTGTCAGTGGTGGTaGCTGTGGCAAGTGCTGCATCTCCAGCAAATGGTCCCTGTGGTG +
Preference number: 1 (lower is better)
Translates to: QLEAPFLWVSCCQWW*LWQVLHLQQMVPVV
Trigger: CACCACAGGGACCATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACCCACAAAAAGGGAGCCTCCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CCA 90 bp GTGCAGCTGGAGGCTCCCTTTTTGTGGGTGTCATGCTGTCAGTGGTaGTGGCTGTGGCAAGTGCTGCATCTCCAGCAAATGGTCCCTGTG +
Preference number: 1 (lower is better)
Translates to: VQLEAPFLWVSCCQW*WLWQVLHLQQMVPV
Trigger: CACAGGGACCATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACCCACAAAAAGGGAGCCTCCAGCTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 90 bp TTTGTAATACTGAGGTCACGGAGTGACAGCCCCCTGTGTGGACTGTaGTTGTTCCTTGGCCATGCACTGCCTCACCCCACAGAGGTCAGG +
Preference number: 1 (lower is better)
Translates to: FVILRSRSDSPLCGL*LFLGHALPHPTEVR
Trigger: CCTGACCTCTGTGGGGTGAGGCAGTGCATGGCCAAGGAACAAGCACAGTCCACACAGGGGGCTGTCACTCCGTGACCTCAGTATTACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 90 bp ATGGCTGGGCTCCCTGCGCCCAGGCTTCGCCTTTCCAAAGCGCCTTaGATAGCCCTCCGGAGAAACTTTGGATTCCAGCACTTTCCTAAA +
Preference number: 1 (lower is better)
Translates to: MAGLPAPRLRLSKAP*IALRRNFGFQHFPK
Trigger: TTTAGGAAAGTGCTGGAATCCAAAGTTTCTCCGGAGGGCTATGCAAGGCGCTTTGGAAAGGCGAAGCCTGGGCGCAGGGAGCCCAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR TCA 90 bp ATCCCTGTGAACTTGCTGGGCTTCATCCCATCTTTCCTGCCCGGCTaGATGACCTGTATCCCAACAGCTTCCTTCACTGAGTCAGGGCCC +
Preference number: 1 (lower is better)
Translates to: IPVNLLGFIPSFLPG*MTCIPTASFTESGP
Trigger: GGGCCCTGACTCAGTGAAGGAAGCTGTTGGGATACAGGTCATTCAGCCGGGCAGGAAAGATGGGATGAAGCCCAGCAAGTTCACAGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR TCA 90 bp ATATCCTCCCTCCTGGTACTTAACCTTAAGCTCATGGCAGACAGCTaGGGAAGTACTCGCAGCAGCAGGGGTGCAGCTGGAGGCTCCCTT +
Preference number: 1 (lower is better)
Translates to: ISSLLVLNLKLMADS*GSTRSSRGAAGGSL
Trigger: AAGGGAGCCTCCAGCTGCACCCCTGCTGCTGCGAGTACTTCCTCAGCTGTCTGCCATGAGCTTAAGGTTAAGTACCAGGAGGGAGGATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 90 bp ACACTTTGCATGGGCAGGGCTGTTTGCTCTCCACTGCATCCCCACTaGCTGGCACCATGCTTGGCTCGGGGTAGGTCTTCAAGAAATATT +
Preference number: 1 (lower is better)
Translates to: TLCMGRAVCSPLHPH*LAPCLARGRSSRNI
Trigger: AATATTTCTTGAAGACCTACCCCGAGCCAAGCATGGTGCCAGGCAGTGGGGATGCAGTGGAGAGCAAACAGCCCTGCCCATGCAAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 90 bp GTCACCCTGAGGCTAGCAGCATCCTTCCCTGCATTTTGCAAAAGCTaGACTGGGCTCTTTCCCTTTGTGGGTGCAGCTCACACTTCTCAC +
Preference number: 1 (lower is better)
Translates to: VTLRLAASFPAFCKS*TGLFPFVGAAHTSH
Trigger: GTGAGAAGTGTGAGCTGCACCCACAAAGGGAAAGAGCCCAGTGCAGCTTTTGCAAAATGCAGGGAAGGATGCTGCTAGCCTCAGGGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CCA 90 bp CCTGAGGCTAGCAGCATCCTTCCCTGCATTTTGCAAAAGCTGCACTaGGCTCTTTCCCTTTGTGGGTGCAGCTCACACTTCTCACCGTAC +
Preference number: 1 (lower is better)
Translates to: PEASSILPCILQKLH*ALSLCGCSSHFSPY
Trigger: GTACGGTGAGAAGTGTGAGCTGCACCCACAAAGGGAAAGAGCCCAGTGCAGCTTTTGCAAAATGCAGGGAAGGATGCTGCTAGCCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR TCA 90 bp CATAGCTGCTTCCGCCTTCGGTCTGTTGCAGTATGGTATCCTGACTaGAGAAAACCACGTGGGGTTGGGAAAGGAAGGACCTTGAGGACC +
Preference number: 1 (lower is better)
Translates to: HSCFRLRSVAVWYPD*RKPRGVGKGRTLRT
Trigger: GGTCCTCAAGGTCCTTCCTTTCCCAACCCCACGTGGTTTTCTTCAGTCAGGATACCATACTGCAACAGACCGAAGGCGGAAGCAGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CCA 90 bp CCTTCCCTGCATTTTGCAAAAGCTGCACTGGGCTCTTTCCCTTTGTaGGTGCAGCTCACACTTCTCACCGTACAGGACACTTTGCATGGG +
Preference number: 1 (lower is better)
Translates to: PSLHFAKAALGSFPL*VQLTLLTVQDTLHG
Trigger: CCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAGCTGCACCCACAAAGGGAAAGAGCCCAGTGCAGCTTTTGCAAAATGCAGGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR TCA 90 bp GTGGCAGCCGACTTTAACCCATACATTCTAGAACAGAGAGAGCCATaGCCAAACCAGAGGGAGAGACACCTGCAGATATCCTGGGTTGCG +
Preference number: 1 (lower is better)
Translates to: VAADFNPYILEQREP*PNQRERHLQISWVA
Trigger: CGCAACCCAGGATATCTGCAGGTGTCTCTCCCTCTGGTTTGGTCATGGCTCTCTCTGTTCTAGAATGTATGGGTTAAAGTCGGCTGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 90 bp GGCAGGGCTGTTTGCTCTCCACTGCATCCCCACTGCCTGGCACCATaGTTGGCTCGGGGTAGGTCTTCAAGAAATATTGAGAATATGAAT +
Preference number: 1 (lower is better)
Translates to: GRAVCSPLHPHCLAP*LARGRSSRNIENMN
Trigger: ATTCATATTCTCAATATTTCTTGAAGACCTACCCCGAGCCAAGCATGGTGCCAGGCAGTGGGGATGCAGTGGAGAGCAAACAGCCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 90 bp GAGCTTAAAGTTCTAGGTCACCCTGAGGCTAGCAGCATCCTTCCCTaGATTTTGCAAAAGCTGCACTGGGCTCTTTCCCTTTGTGGGTGC +
Preference number: 1 (lower is better)
Translates to: ELKVLGHPEASSILP*ILQKLHWALSLCGC
Trigger: GCACCCACAAAGGGAAAGAGCCCAGTGCAGCTTTTGCAAAATGCAGGGAAGGATGCTGCTAGCCTCAGGGTGACCTAGAACTTTAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CCA 90 bp TCCTCCTCGAGACAAAGGAGCCAGATGCTCTCTCCTCGCATGTTCTaGAAGCTACAGAATGAACACATGCCTGAGGTTTGCCCAATCATA +
Preference number: 1 (lower is better)
Translates to: SSSRQRSQMLSPRMF*KLQNEHMPEVCPII
Trigger: TATGATTGGGCAAACCTCAGGCATGTGTTCATTCTGTAGCTTCCAGAACATGCGAGGAGAGAGCATCTGGCTCCTTTGTCTCGAGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 90 bp ATAATCAGTGTTTCATGGCAGTTAGGTAAATCCCAGGCACTGAAGTaGTCGCAGCCTCACAGATCGAACGACTTCCTACAACCTGTCACT +
Preference number: 1 (lower is better)
Translates to: IISVSWQLGKSQALK*SQPHRSNDFLQPVT
Trigger: AGTGACAGGTTGTAGGAAGTCGTTCGATCTGTGAGGCTGCGAGCACTTCAGTGCCTGGGATTTACCTAACTGCCATGAAACACTGATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 90 bp CCTCGCATGTTCTGGAAGCTACAGAATGAACACATGCCTGAGGTTTaGCCAATCATATCCTCCCTCCTGGTACTTAACCTTAAGCTCATG +
Preference number: 1 (lower is better)
Translates to: PRMFWKLQNEHMPEV*PIISSLLVLNLKLM
Trigger: CATGAGCTTAAGGTTAAGTACCAGGAGGGAGGATATGATTGGGCAAACCTCAGGCATGTGTTCATTCTGTAGCTTCCAGAACATGCGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 90 bp TTACATTTTTGCAGATCCTTAAAGCCTGGCTTAACAGAAGGCTGCTaGATCCTCATAGCTGCTTCCGCCTTCGGTCTGTTGCAGTATGGT +
Preference number: 1 (lower is better)
Translates to: LHFCRSLKPGLTEGC*ILIAASAFGLLQYG
Trigger: ACCATACTGCAACAGACCGAAGGCGGAAGCAGCTATGAGGATGCAGCAGCCTTCTGTTAAGCCAGGCTTTAAGGATCTGCAAAAATGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CCA 90 bp TTACAGAATCTGACACATGCTGAATGCTGGATAATCAGTGTTTCATaGCAGTTAGGTAAATCCCAGGCACTGAAGTGCTCGCAGCCTCAC +
Preference number: 1 (lower is better)
Translates to: LQNLTHAECWIISVS*QLGKSQALKCSQPH
Trigger: GTGAGGCTGCGAGCACTTCAGTGCCTGGGATTTACCTAACTGCCATGAAACACTGATTATCCAGCATTCAGCATGTGTCAGATTCTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR GCA 90 bp CGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCCACTGCATCCCCACTCCGGGAGGCGGAGGCTaGGGCGAGCTGAGATCAAGA +
Preference number: 2 (lower is better)
Translates to: RTGHFAWAGLFALHCIPTPGGGG*GELRSR
Trigger: TCTTGATCTCAGCTCGCCGCAGCCTCCGCCTCCCGG...AGTGGGGATGCAGTGGAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CAA 90 bp GAGGAAGTACTCGCAGCAGCAGGGGTGCAGCTGGAGGCTCCCTTTTaGTGGGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTG +
Preference number: 2 (lower is better)
Translates to: EEVLAAAGVQLEAPF*WVSCCQWWWLWQVL
Trigger: CAGCACTTGCCACAGCCACCACCACTGACAGCATGACACCCACAAAAAGGGAGCCTCCAGCTGCACCCCTGCTGCTGCGAGTACTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CAA 90 bp GTAATACTGAGGTCACGGAGTGACAGCCCCCTGTGTGGACTGTGCTaGTTCCTTGGCCATGCACTGCCTCACCCCACAGAGGTCAGGCAT +
Preference number: 2 (lower is better)
Translates to: VILRSRSDSPLCGLC*FLGHALPHPTEVRH
Trigger: ATGCCTGACCTCTGTGGGGTGAGGCAGTGCATGGCCAAGGAACAAGCACAGTCCACACAGGGGGCTGTCACTCCGTGACCTCAGTATTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR GCA 90 bp TTGTGGGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGTCCTTGGCCATGCACTaGCTCACCCCACAGAGGTCA +
Preference number: 2 (lower is better)
Translates to: LWVSCCQWWWLWQVLHLQSLAMH*LTPQRS
Trigger: TGACCTCTGTGGGGTGAGGCAGTGCATGGCCAAGGA...CTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACCCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CAA 90 bp TTCCCTTTGTGGGTGCAGCTCACACTTCTCACCGTACAGGACACTTaGCATGGGCAGGGCTGTTTGCTCTCCACTGCATCCCCACTGCCT +
Preference number: 2 (lower is better)
Translates to: FPLWVQLTLLTVQDT*HGQGCLLSTASPLP
Trigger: AGGCAGTGGGGATGCAGTGGAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAGCTGCACCCACAAAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR GCA 90 bp GCTCACACTTCTCACCGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCGCAGGATCCAGCTTCTaGCCTGATTCCCTGGTGTAC +
Preference number: 2 (lower is better)
Translates to: AHTSHRTGHFAWAGLFALAGSSF*PDSLVY
Trigger: GTACACCAGGGAATCAGGGCAGAAGCTGGATCCTGC...GAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR GCA 90 bp CACGGAGTGACAGCCCCCTGTGTGGACTGTGCTTGTTCCTTGGCCATGCACTGCCTCAAACATTACTCTTaGAGGATCCAGCTTCTGCCC +
Preference number: 2 (lower is better)
Translates to: HGVTAPCVDCACSLAMHCLKHYS*RIQLLP
Trigger: GGGCAGAAGCTGGATCCTGCAAGAGTAATGTTTGAG...GCAGTGCATGGCCAAGGAACAAGCACAGTCCACACAGGGGGCTGTCACTCCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR GCA 90 bp GGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGCAAATAAAAGTTACACCCACTaGTGCTCAGGGCTGCCGGCT +
Preference number: 2 (lower is better)
Translates to: GVMLSVVVAVASAASPANKSYTH*CSGLPA
Trigger: AGCCGGCAGCCCTGAGCAGCAGTGGGTGTAACTTTT...ATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR GCA 90 bp GATATCCTGGGTTGCGGGCTGGAAGAAGTATTAACAGTTGATGAAGCAGCTTGGCATGGCTGGGCTCCCTaGGCCCAGGCTTCGCCTTTC +
Preference number: 2 (lower is better)
Translates to: DILGCGLEEVLTVDEAAWHGWAP*AQASPF
Trigger: GAAAGGCGAAGCCTGGGCGCAGGGAGCCCAGCCATG...CCAAGCTGCTTCATCAACTGTTAATACTTCTTCCAGCCCGCAACCCAGGATATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR TCA 90 bp CGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCCACTGCATCCCCACTAGAGCTGGCTTTTGTTaGCAGCATGTGTACAGAGCA +
Preference number: 2 (lower is better)
Translates to: RTGHFAWAGLFALHCIPTRAGFC*QHVYRA
Trigger: TGCTCTGTACACATGCTGTCAACAAAAGCCAGCTCT...AGTGGGGATGCAGTGGAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR TCA 90 bp GATATCCTGGGTTGCGGGCTGGAAGAAGTATTAACAGTTGATGAAGCAGCTTGGACTGAGGTCACGGAGTaGCAGCCCCCTGTGTGGACT +
Preference number: 2 (lower is better)
Translates to: DILGCGLEEVLTVDEAAWTEVTE*QPPVWT
Trigger: AGTCCACACAGGGGGCTGTCACTCCGTGACCTCAGT...CCAAGCTGCTTCATCAACTGTTAATACTTCTTCCAGCCCGCAACCCAGGATATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CCA 90 bp GATATCCTGGGTTGCGGGCTGGAAGAAGTATTAACAGTTGATGAAGCAGCTTGGCAGCAGGGGTGCAGCTaGAGGCTCCCTTTTTGTGGG +
Preference number: 2 (lower is better)
Translates to: DILGCGLEEVLTVDEAAWQQGCS*RLPFCG
Trigger: CCCACAAAAAGGGAGCCTCCAGCTGCACCCCTGCTG...CCAAGCTGCTTCATCAACTGTTAATACTTCTTCCAGCCCGCAACCCAGGATATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CAA 90 bp AAAGTTCTAGGTCACCCTGAGGCTAGCAGCATCCTTCCCTGCATTTaGCAAAAGCTGCACTGGGCTCTTTCCCTTTGTGGGTGCAGCTCA +
Preference number: 2 (lower is better)
Translates to: KVLGHPEASSILPCI*QKLHWALSLCGCSS
Trigger: TGAGCTGCACCCACAAAGGGAAAGAGCCCAGTGCAGCTTTTGCAAAATGCAGGGAAGGATGCTGCTAGCCTCAGGGTGACCTAGAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR TCA 90 bp CACGGAGTGACAGCCCCCTGTGTGGACTGTGCTTGTTCCTTGGCCATGCACTGCTCTCCATCTTTCCAATaGCAAGTAATGCTTCACACT +
Preference number: 2 (lower is better)
Translates to: HGVTAPCVDCACSLAMHCSPSFQ*QVMLHT
Trigger: AGTGTGAAGCATTACTTGTCATTGGAAAGATGGAGA...GCAGTGCATGGCCAAGGAACAAGCACAGTCCACACAGGGGGCTGTCACTCCGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR TCA 90 bp CTCACACTTCTCACCGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCCGTTTGGCCCTTAAAATaGCACCTGCTTCTACTGACC +
Preference number: 2 (lower is better)
Translates to: LTLLTVQDTLHGQGCLLSVWPLK*HLLLLT
Trigger: GGTCAGTAGAAGCAGGTGTCATTTTAAGGGCCAAAC...GGAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR TCA 90 bp GAAGTGCTCGCAGCCTCACAGATCGAACGACTTCCTACAACCTGTCACTTCTGTTGTAAACTGCCAGTGTaGGAGAGACAGAGCGAGCTC +
Preference number: 2 (lower is better)
Translates to: EVLAASQIERLPTTCHFCCKLPV*ERQSEL
Trigger: GAGCTCGCTCTGTCTCTCTCACACTGGCAGTTTACA...ACAGAAGTGACAGGTTGTAGGAAGTCGTTCGATCTGTGAGGCTGCGAGCACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR TCA 90 bp CCCTCCTGGTACTTAACCTTAAGCTCATGGCAGACAGCTGAGGAAGTACTCGCAGGATGGCCTACCTGGTaGGAAAGCTTGTTTCCACAC +
Preference number: 2 (lower is better)
Translates to: PSWYLTLSSWQTAEEVLAGWPTW*ESLFPH
Trigger: GTGTGGAAACAAGCTTTCTCACCAGGTAGGCCATCC...TGCGAGTACTTCCTCAGCTGTCTGCCATGAGCTTAAGGTTAAGTACCAGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR TCA 90 bp CCCTCCTGGTACTTAACCTTAAGCTCATGGCAGACAGCTGAGGAAGTACTCGCAGTGGCCAACAGAAAGTaGGCAGGGGCTGTATTTGTG +
Preference number: 2 (lower is better)
Translates to: PSWYLTLSSWQTAEEVLAVANRK*AGAVFV
Trigger: CACAAATACAGCCCCTGCTCACTTTCTGTTGGCCAC...TGCGAGTACTTCCTCAGCTGTCTGCCATGAGCTTAAGGTTAAGTACCAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR TCA 90 bp CCCTCCTGGTACTTAACCTTAAGCTCATGGCAGACAGCTGAGGAAGTACTCGCATCTTTCCTGCCCGGCTaGATGACCTGTATCCCAACA +
Preference number: 2 (lower is better)
Translates to: PSWYLTLSSWQTAEEVLASFLPG*MTCIPT
Trigger: TGTTGGGATACAGGTCATTCAGCCGGGCAGGAAAGA...TGCGAGTACTTCCTCAGCTGTCTGCCATGAGCTTAAGGTTAAGTACCAGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR GCA 90 bp CACGGAGTGACAGCCCCCTGTGTGGACTGTGCTTGTTCCTTGGCCATGCACTGCGGACAAACCACTTGTTaGTTATTTCCACACAGTTAC +
Preference number: 2 (lower is better)
Translates to: HGVTAPCVDCACSLAMHCGQTTC*LFPHSY
Trigger: GTAACTGTGTGGAAATAAGCAACAAGTGGTTTGTCC...GCAGTGCATGGCCAAGGAACAAGCACAGTCCACACAGGGGGCTGTCACTCCGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR GCA 90 bp CATCAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTGGCCAGTGGTCCCACTaGAGCCTCCAAACCTGCCTC +
Preference number: 2 (lower is better)
Translates to: HQIAKESGVVDFCHLNTLGQWSH*SLQTCL
Trigger: GAGGCAGGTTTGGAGGCTGCAGTGGGACCACTGGCC...AAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR GCA 90 bp CAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTCCTTCGCAGCAGCAGGGGTaGAGCTGGAGGCTCCCTTTT +
Preference number: 2 (lower is better)
Translates to: QIAKESGVVDFCHLNTLPSQQQG*SWRLPF
Trigger: AAAAGGGAGCCTCCAGCTGCACCCCTGCTGCTGCGA...AGGAAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CCA 90 bp CCCTCCTGGTACTTAACCTTAAGCTCATGGCAGACAGCTGAGGAAGTACTCGCAGGCTCTTTCCCTTTGTaGGTGCAGCTCACACTTCTC +
Preference number: 2 (lower is better)
Translates to: PSWYLTLSSWQTAEEVLAGSFPL*VQLTLL
Trigger: GAGAAGTGTGAGCTGCACCCACAAAGGGAAAGAGCC...TGCGAGTACTTCCTCAGCTGTCTGCCATGAGCTTAAGGTTAAGTACCAGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CAA 90 bp CATCCTTCCCTGCATTTTGCAAAAGCTGCACTGGGCTCTTTCCCTTaGTGGGTGCAGCTCACACTTCTCACCGTACAGGACACTTTGCAT +
Preference number: 2 (lower is better)
Translates to: HPSLHFAKAALGSFP*WVQLTLLTVQDTLH
Trigger: ATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAGCTGCACCCACAAAGGGAAAGAGCCCAGTGCAGCTTTTGCAAAATGCAGGGAAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR TCA 90 bp CCTAGGGAAGGGATAAACCACTGTCTTTTTGTGAGGCATGGTTGTGTTATGTCAAACAGCTTCCTTCACTaGGTCAGGGCCCTGGCAGGG +
Preference number: 2 (lower is better)
Translates to: PREGINHCLFVRHGCVMSNSFLH*VRALAG
Trigger: CCCTGCCAGGGCCCTGACTCAGTGAAGGAAGCTGTT...TGACATAACACAACCATGCCTCACAAAAAGACAGTGGTTTATCCCTTCCCTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR TCA 90 bp CAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTCCTCTTCCCGGATCCCTGTaGACTTGCTGGGCTTCATCC +
Preference number: 2 (lower is better)
Translates to: QIAKESGVVDFCHLNTLPLPGSL*TCWASS
Trigger: GGATGAAGCCCAGCAAGTTCACAGGGATCCGGGAAG...AGGAAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR GCA 90 bp CAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTCCTCTGTTTGCTCTCCACTaGATCCCCACTGCCTGGCAC +
Preference number: 2 (lower is better)
Translates to: QIAKESGVVDFCHLNTLPLFALH*IPTAWH
Trigger: GTGCCAGGCAGTGGGGATGCAGTGGAGAGCAAACAG...AGGAAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR GCA 90 bp CAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTCCTGGAGTTTGCACCAGGTaGCAACAAGCTCCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: QIAKESGVVDFCHLNTLPGVCTR*QQAPGL
Trigger: CAGGCCAGGAGCTTGTTGGCACCTGGTGCAAACTCC...AGGAAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR GCA 90 bp CAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTCCTGCCTCCCTCACCGTCTaGTGCTTCTACCTACATGGC +
Preference number: 2 (lower is better)
Translates to: QIAKESGVVDFCHLNTLPASLTV*CFYLHG
Trigger: GCCATGTAGGTAGAAGCAGCAGACGGTGAGGGAGGC...AGGAAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CCA 90 bp CATCAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTGGGACCCCTCAGGTTTaGGAGTTTGCACCAGGTGCC +
Preference number: 2 (lower is better)
Translates to: HQIAKESGVVDFCHLNTLGTPQV*EFAPGA
Trigger: GGCACCTGGTGCAAACTCCCAAACCTGAGGGGTCCC...AAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR TCA 90 bp TTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACGTTGTGGAGCAGACGTaGTCAGACCCCCAGCCTGGA +
Preference number: 2 (lower is better)
Translates to: FQDIRKAHGKQIMDDLPHVVEQT*SDPQPG
Trigger: TCCAGGCTGGGGGTCTGATCACGTCTGCTCCACAAC...GTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR TCA 90 bp GGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGCAAATGAAACAAATCATGGATaGTCTGCCACACATTTTGCG +
Preference number: 2 (lower is better)
Translates to: GVMLSVVVAVASAASPANETNHG*SATHFA
Trigger: CGCAAAATGTGTGGCAGATCATCCATGATTTGTTTC...ATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR GCA 90 bp CAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTCCTCCGTACAGGACACTTTaGATGGGCAGGGCTGTTTGC +
Preference number: 2 (lower is better)
Translates to: QIAKESGVVDFCHLNTLPPYRTL*MGRAVC
Trigger: GCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGG...AGGAAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CCA 90 bp TTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACGAGGCGAAGGCCAAGTaGAGTCTGTGTGTGCCTGGG +
Preference number: 2 (lower is better)
Translates to: FQDIRKAHGKQIMDDLPHEAKAK*SLCVPG
Trigger: CCCAGGCACACACAGACTCCACTTGGCCTTCGCCTC...GTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR GCA 90 bp ATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACATTTTGCCCACTGCATCCCCACTaGCTGGCACCATGCTTGGCT +
Preference number: 2 (lower is better)
Translates to: IFVKHTGNKSWMICHTFCPLHPH*LAPCLA
Trigger: AGCCAAGCATGGTGCCAGGCAGTGGGGATGCAGTGG...GCAAAATGTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR GCA 90 bp CATCAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTTCCTCCAGCACTGCCTaGCCATGCACCCCTAAATCT +
Preference number: 2 (lower is better)
Translates to: HQIAKESGVVDFCHLNTLSSSTA*PCTPKS
Trigger: AGATTTAGGGGTGCATGGGCAGGCAGTGCTGGAGGA...AAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR GCA 90 bp TTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACTCCCAGGCACTGAAGTaGTCGCAGCCTCACAGATCG +
Preference number: 2 (lower is better)
Translates to: FQDIRKAHGKQIMDDLPHSQALK*SQPHRS
Trigger: CGATCTGTGAGGCTGCGAGCACTTCAGTGCCTGGGA...GTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR GCA 90 bp CATCAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTTCCCTCACCGTCTGCTaGTTCTACCTACATGGCTGG +
Preference number: 2 (lower is better)
Translates to: HQIAKESGVVDFCHLNTLSLTVC*FYLHGW
Trigger: CCAGCCATGTAGGTAGAAGCAGCAGACGGTGAGGGA...AAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR GCA 90 bp CCTAGGGAAGGGATAAACCACTGTCTTTTTGTGAGGCATGGTTGTGTTATGTCAGGCTGTGGCAAGTGCTaGATCTCCAGCAAATGGTCC +
Preference number: 2 (lower is better)
Translates to: PREGINHCLFVRHGCVMSGCGKC*ISSKWS
Trigger: GGACCATTTGCTGGAGATGCAGCACTTGCCACAGCC...TGACATAACACAACCATGCCTCACAAAAAGACAGTGGTTTATCCCTTCCCTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR TCA 90 bp CAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTCCTCAGGTTTGGGATGAATaGACAAGAGGCGAAGGCCAA +
Preference number: 2 (lower is better)
Translates to: QIAKESGVVDFCHLNTLPQVWDE*TRGEGQ
Trigger: TTGGCCTTCGCCTCTTGTTCATTCATCCCAAACCTG...AGGAAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR TCA 90 bp GGTTATGTGTTTTTCTCCAAACCCAACAAGTTTGCCTCATGGCCAGGGCAAAGTAACCACCTCCATCTATaGTGCATACTGATGAGGCGG +
Preference number: 2 (lower is better)
Translates to: GYVFFSKPNKFASWPGQSNHLHL*CILMRR
Trigger: CCGCCTCATCAGTATGCATCATAGATGGAGGTGGTT...ACTTTGCCCTGGCCATGAGGCAAACTTGTTGGGTTTGGAGAAAAACACATAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR GCA 90 bp CAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTCCTCAAACCCAACAAGTTTaGCTCATGGCCAGGGCAAAG +
Preference number: 2 (lower is better)
Translates to: QIAKESGVVDFCHLNTLPQTQQV*LMARAK
Trigger: CTTTGCCCTGGCCATGAGGCAAACTTGTTGGGTTTG...AGGAAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR GCA 90 bp CAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTCCTTCAGGTTTGGGAGTTTaGACCAGGTGCCAACAAGCT +
Preference number: 2 (lower is better)
Translates to: QIAKESGVVDFCHLNTLPSGLGV*TRCQQA
Trigger: AGCTTGTTGGCACCTGGTGCAAACTCCCAAACCTGA...AGGAAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR TCA 90 bp CATCAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTATCTCAAACACGGCGTaGGACGAGTGTTTGAAGCCT +
Preference number: 2 (lower is better)
Translates to: HQIAKESGVVDFCHLNTLISNTA*DECLKP
Trigger: AGGCTTCAAACACTCGTCTCACGCCGTGTTTGAGAT...AAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR GCA 90 bp CATCAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTGACAAAGGAGCCAGATaGTCTCTCCTCGCATGTTCT +
Preference number: 2 (lower is better)
Translates to: HQIAKESGVVDFCHLNTLDKGAR*SLLACS
Trigger: AGAACATGCGAGGAGAGAGCATCTGGCTCCTTTGTC...AAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CCA 90 bp CCTAGGGAAGGGATAAACCACTGTCTTTTTGTGAGGCATGGTTGTGTTATGTCACATGGCCATGTGTTGTaGCCAACAGAAAGTGAGCAG +
Preference number: 2 (lower is better)
Translates to: PREGINHCLFVRHGCVMSHGHVL*PTESEQ
Trigger: CTGCTCACTTTCTGTTGGCCACAACACATGGCCATG...TGACATAACACAACCATGCCTCACAAAAAGACAGTGGTTTATCCCTTCCCTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR TCA 90 bp ATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACATTTTGCATACTGATGAGGCGGTaGTCTCAAACACGGCGTGAG +
Preference number: 2 (lower is better)
Translates to: IFVKHTGNKSWMICHTFCILMRR*SQTRRE
Trigger: CTCACGCCGTGTTTGAGATCACCGCCTCATCAGTAT...GCAAAATGTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CCA 90 bp CCTAGGGAAGGGATAAACCACTGTCTTTTTGTGAGGCATGGTTGTGTTATGTCACTGAAAGTGCGAACCTaGAAAGCAAGTCTCTTACCC +
Preference number: 2 (lower is better)
Translates to: PREGINHCLFVRHGCVMSLKVRT*KASLLP
Trigger: GGGTAAGAGACTTGCTTTCCAGGTTCGCACTTTCAG...TGACATAACACAACCATGCCTCACAAAAAGACAGTGGTTTATCCCTTCCCTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CCA 90 bp TTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACAACAAGTTTGCCTCATaGCCAGGGCAAAGTGTGTGG +
Preference number: 2 (lower is better)
Translates to: FQDIRKAHGKQIMDDLPHNKFAS*PGQSVW
Trigger: CCACACACTTTGCCCTGGCCATGAGGCAAACTTGTT...GTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CCA 90 bp GATATCCTGGGTTGCGGGCTGGAAGAAGTATTAACAGTTGATGAAGCAGCTTGGTCTTTTTGTGAGGCATaGTTGTGTTATGTCAGGTGG +
Preference number: 2 (lower is better)
Translates to: DILGCGLEEVLTVDEAAWSFCEA*LCYVRW
Trigger: CCACCTGACATAACACAACCATGCCTCACAAAAAGA...CCAAGCTGCTTCATCAACTGTTAATACTTCTTCCAGCCCGCAACCCAGGATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CAA 90 bp CGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACATTTaGCGACTCCTTGAGAACCATTTTGTAATACTGAGGTCACGGAGT +
Preference number: 2 (lower is better)
Translates to: RKAHGKQIMDDLPHI*RLLENHFVILRSRS
Trigger: ACTCCGTGACCTCAGTATTACAAAATGGTTCTCAAGGAGTCGCAAAATGTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR TCA 90 bp AAAAATTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCGACACCTGCTTCTACTaGCCACTTCCGGTTAAGGCC +
Preference number: 2 (lower is better)
Translates to: KNFRIFVKHTGNKSWMICDTCFY*PLPVKA
Trigger: GGCCTTAACCGGAAGTGGTCAGTAGAAGCAGGTGTC...GCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR TCA 90 bp AAAAATTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCGTAAATCCCAGGCACTaGAGTGCTCGCAGCCTCACA +
Preference number: 2 (lower is better)
Translates to: KNFRIFVKHTGNKSWMICVNPRH*SARSLT
Trigger: TGTGAGGCTGCGAGCACTTCAGTGCCTGGGATTTAC...GCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR TCA 90 bp CAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTCCTGAATCTGACACATGCTaGATGCTGGATAATCAGTGT +
Preference number: 2 (lower is better)
Translates to: QIAKESGVVDFCHLNTLPESDTC*MLDNQC
Trigger: ACACTGATTATCCAGCATTCAGCATGTGTCAGATTC...AGGAAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CAA 90 bp AATAGTGAATTTAGGGTTATGTGTTTTTCTCCAAACCCAACAAGTTaGCCTCATGGCCAGGGCAAAGTGTGTGGAGCCCATTTGAGATCA +
Preference number: 2 (lower is better)
Translates to: NSEFRVMCFSPNPTS*PHGQGKVCGAHLRS
Trigger: TGATCTCAAATGGGCTCCACACACTTTGCCCTGGCCATGAGGCAAACTTGTTGGGTTTGGAGAAAAACACATAACCCTAAATTCACTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR TCA 90 bp TTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACTTTTGCAGCAAAAGCTaGCTGATACATCACAGGAGA +
Preference number: 2 (lower is better)
Translates to: FQDIRKAHGKQIMDDLPHFCSKS*LIHHRR
Trigger: TCTCCTGTGATGTATCAGTCAGCTTTTGCTGCAAAA...GTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CCA 90 bp CATCAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTACGGGAAACAAATCATaGATGATCTGCCACACATTT +
Preference number: 2 (lower is better)
Translates to: HQIAKESGVVDFCHLNTLTGNKS*MICHTF
Trigger: AAATGTGTGGCAGATCATCCATGATTTGTTTCCCGT...AAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CCA 90 bp AAAAATTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCCAGGGCAAAGTGTGTaGAGCCCATTTGAGATCATT +
Preference number: 2 (lower is better)
Translates to: KNFRIFVKHTGNKSWMICPGQSV*SPFEII
Trigger: AATGATCTCAAATGGGCTCCACACACTTTGCCCTGG...GCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CCA 72 bp GCCTCCCTCACCGTCTGCTGCTTCTACCTACATGGCTaGGCTCCCTGCGCCCAGGCTTCGCCTTTCCAAAGC +
Preference number: 3 (lower is better)
Translates to: ASLTVCCFYLHG*APCAQASPFQS
Trigger: GCTTTGGAAAGGCGAAGCCTGGGCGCAGGGAGCCCAGCCATGTAGGTAGAAGCAGCAGACGGTGAGGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR TCA 72 bp TGGGAGTTTGCACCAGGTGCCAACAAGCTCCTGGCCTaGAACTGTAGCCAGGAGGGGCCAGTGGTCCCACTG +
Preference number: 3 (lower is better)
Translates to: WEFAPGANKLLA*NCSQEGPVVPL
Trigger: CAGTGGGACCACTGGCCCCTCCTGGCTACAGTTTCAGGCCAGGAGCTTGTTGGCACCTGGTGCAAACTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 72 bp ACCCACTGCTGCTCAGGGCTGCCGGCTGGTGTAAACTaGCAGTGTGAGAGAGACAGAGCGAGCTCCCTCAGA +
Preference number: 3 (lower is better)
Translates to: THCCSGLPAGVN*QCERDRASSLR
Trigger: TCTGAGGGAGCTCGCTCTGTCTCTCTCACACTGGCAGTTTACACCAGCCGGCAGCCCTGAGCAGCAGTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 72 bp ATGGGCAGGGCTGTTTGCTCTCCACTGCATCCCCACTaGCTGGCACCATGCTTGGCTCGGGGTAGGTCTTCA +
Preference number: 3 (lower is better)
Translates to: MGRAVCSPLHPH*LAPCLARGRSS
Trigger: TGAAGACCTACCCCGAGCCAAGCATGGTGCCAGGCAGTGGGGATGCAGTGGAGAGCAAACAGCCCTGCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 72 bp ACCGTCTGCTGCTTCTACCTACATGGCTGGGCTCCCTaGGCCCAGGCTTCGCCTTTCCAAAGCGCCTTGCAT +
Preference number: 3 (lower is better)
Translates to: TVCCFYLHGWAP*AQASPFQSALH
Trigger: ATGCAAGGCGCTTTGGAAAGGCGAAGCCTGGGCGCAGGGAGCCCAGCCATGTAGGTAGAAGCAGCAGACGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 72 bp CTCCCTGCGCCCAGGCTTCGCCTTTCCAAAGCGCCTTaGATAGCCCTCCGGAGAAACTTTGGATTCCAGCAC +
Preference number: 3 (lower is better)
Translates to: LPAPRLRLSKAP*IALRRNFGFQH
Trigger: GTGCTGGAATCCAAAGTTTCTCCGGAGGGCTATGCAAGGCGCTTTGGAAAGGCGAAGCCTGGGCGCAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 72 bp GGGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTaGTGCATCTCCAGCAAATGGTCCCTGTGGTGCAGC +
Preference number: 3 (lower is better)
Translates to: GCHAVSGGGCGK*CISSKWSLWCS
Trigger: GCTGCACCACAGGGACCATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 72 bp GGGGTGCAGCTGGAGGCTCCCTTTTTGTGGGTGTCATaGTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCAT +
Preference number: 3 (lower is better)
Translates to: GVQLEAPFLWVS*CQWWWLWQVLH
Trigger: ATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACCCACAAAAAGGGAGCCTCCAGCTGCACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CCA 72 bp AGGTTTGGGAGTTTGCACCAGGTGCCAACAAGCTCCTaGCCTGAAACTGTAGCCAGGAGGGGCCAGTGGTCC +
Preference number: 3 (lower is better)
Translates to: RFGSLHQVPTSS*PETVARRGQWS
Trigger: GGACCACTGGCCCCTCCTGGCTACAGTTTCAGGCCAGGAGCTTGTTGGCACCTGGTGCAAACTCCCAAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR TCA 72 bp TCCCGTGTGGAGTACTCCGGCCTCACCACTGCTAACTaGGGGGCTGGAATGCAGGGTCTTTCTCATCTCACC +
Preference number: 3 (lower is better)
Translates to: SRVEYSGLTTAN*GAGMQGLSHLT
Trigger: GGTGAGATGAGAAAGACCCTGCATTCCAGCCCCTCAGTTAGCAGTGGTGAGGCCGGAGTACTCCACACGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR TCA 72 bp CCTGGGTTTCCAGCCACACAACTTCCCGGATCCCTGTaGACTTGCTGGGCTTCATCCCATCTTTCCTGCCCG +
Preference number: 3 (lower is better)
Translates to: PGFPATQLPGSL*TCWASSHLSCP
Trigger: CGGGCAGGAAAGATGGGATGAAGCCCAGCAAGTTCACAGGGATCCGGGAAGTTGTGTGGCTGGAAACCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 72 bp GGGTGCAGCTCACACTTCTCACCGTACAGGACACTTTaGATGGGCAGGGCTGTTTGCTCTCCACTGCATCCC +
Preference number: 3 (lower is better)
Translates to: GCSSHFSPYRTL*MGRAVCSPLHP
Trigger: GGGATGCAGTGGAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAGCTGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 72 bp TGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTaGATCTCCAGCAAATGGTCCCTGTGGTGCAGCCCT +
Preference number: 3 (lower is better)
Translates to: CHAVSGGGCGKC*ISSKWSLWCSP
Trigger: AGGGCTGCACCACAGGGACCATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CCA 72 bp CAGCTGAGGAAGTACTCGCAGCAGCAGGGGTGCAGCTaGAGGCTCCCTTTTTGTGGGTGTCATGCTGTCAGT +
Preference number: 3 (lower is better)
Translates to: QLRKYSQQQGCS*RLPFCGCHAVS
Trigger: ACTGACAGCATGACACCCACAAAAAGGGAGCCTCCAGCTGCACCCCTGCTGCTGCGAGTACTTCCTCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CAA 90 bp TTGTGGGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGGAGCAGGGGCTGTATTaGTGCTTGCAAGGTAGGGCT +
Preference number: 3 (lower is better)
Translates to: LWVSCCQWWWLWQVLHLQEQGLY*CLQGRA
Trigger: AGCCCTACCTTGCAAGCACAAATACAGCCCCTGCTC...CTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CAA 90 bp GGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGCAAATGACTGTGCTTGTTCCTaGGCCATGCACTGCCTCACC +
Preference number: 3 (lower is better)
Translates to: GVMLSVVVAVASAASPANDCACS*AMHCLT
Trigger: GGTGAGGCAGTGCATGGCCAAGGAACAAGCACAGTC...ATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CCA 72 bp TGCTTCAACCAGGGACCCAGAATACGGGACATGTTGTaGAGCAGACGTGATCAGACCCCCAGCCTGGAGCAT +
Preference number: 3 (lower is better)
Translates to: CFNQGPRIRDML*SRRDQTPSLEH
Trigger: ATGCTCCAGGCTGGGGGTCTGATCACGTCTGCTCCACAACATGTCCCGTATTCTGGGTCCCTGGTTGAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CAA 90 bp CGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCCACTGCATCCCCACTGAGCTGAGATCAAGATaGTGCCATTGCACTCCAGCC +
Preference number: 3 (lower is better)
Translates to: RTGHFAWAGLFALHCIPTELRSR*CHCTPA
Trigger: GGCTGGAGTGCAATGGCACAATCTTGATCTCAGCTC...AGTGGGGATGCAGTGGAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CAA 90 bp GGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGCAAATACCGTACAGGACACTTaGCATGGGCAGGGCTGTTTG +
Preference number: 3 (lower is better)
Translates to: GVMLSVVVAVASAASPANTVQDT*HGQGCL
Trigger: CAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGT...ATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CAA 90 bp GGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGCAAATCTGGGCTCTTTCCCTTaGTGGGTGCAGCTCACACTT +
Preference number: 3 (lower is better)
Translates to: GVMLSVVVAVASAASPANLGSFP*WVQLTL
Trigger: AAGTGTGAGCTGCACCCACAAAGGGAAAGAGCCCAG...ATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CAA 90 bp GGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGCAAATGGGCTGTATTTGTGCTaGCAAGGTAGGGCTTGGCCT +
Preference number: 3 (lower is better)
Translates to: GVMLSVVVAVASAASPANGLYLC*QGRAWP
Trigger: AGGCCAAGCCCTACCTTGCAAGCACAAATACAGCCC...ATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CAA 90 bp GGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGCAAATCTGTGTGGACTGTGCTaGTTCCTTGGCCATGCACTG +
Preference number: 3 (lower is better)
Translates to: GVMLSVVVAVASAASPANLCGLC*FLGHAL
Trigger: CAGTGCATGGCCAAGGAACAAGCACAGTCCACACAG...ATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR TCA 72 bp CTCCTGGTACTTAACCTTAAGCTCATGGCAGACAGCTaGGGAAGTACTCGCAGCAGCAGGGGTGCAGCTGGA +
Preference number: 3 (lower is better)
Translates to: LLVLNLKLMADS*GSTRSSRGAAG
Trigger: TCCAGCTGCACCCCTGCTGCTGCGAGTACTTCCTCAGCTGTCTGCCATGAGCTTAAGGTTAAGTACCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR TCA 72 bp GCATGGTTGTGTTATGTCAGGTGGGAGCCTGATTTCTaGGGTGCGCGCATGGGAAGATGGGGGTGCATCAGA +
Preference number: 3 (lower is better)
Translates to: AWLCYVRWEPDF*GARMGRWGCIR
Trigger: TCTGATGCACCCCCATCTTCCCATGCGCGCACCTCAGAAATCAGGCTCCCACCTGACATAACACAACCATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 72 bp TTGTGGCCAACAGAAAGTGAGCAGGGGCTGTATTTGTaGTTGCAAGGTAGGGCTTGGCCTCCTGTGCTTCTG +
Preference number: 3 (lower is better)
Translates to: LWPTESEQGLYL*LQGRAWPPVLL
Trigger: CAGAAGCACAGGAGGCCAAGCCCTACCTTGCAAGCACAAATACAGCCCCTGCTCACTTTCTGTTGGCCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 72 bp GCCTGGCTTAACAGAAGGCTGCTGCATCCTCATAGCTaGTTCCGCCTTCGGTCTGTTGCAGTATGGTATCCT +
Preference number: 3 (lower is better)
Translates to: AWLNRRLLHPHS*FRLRSVAVWYP
Trigger: AGGATACCATACTGCAACAGACCGAAGGCGGAAGCAGCTATGAGGATGCAGCAGCCTTCTGTTAAGCCAGGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CCA 72 bp TTTTTGTGGGTGTCATGCTGTCAGTGGTGGTGGCTGTaGCAAGTGCTGCATCTCCAGCAAATGGTCCCTGTG +
Preference number: 3 (lower is better)
Translates to: FLWVSCCQWWWL*QVLHLQQMVPV
Trigger: CACAGGGACCATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACCCACAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CAA 90 bp GATATCCTGGGTTGCGGGCTGGAAGAAGTATTAACAGTTGATGAAGCAGCTTGGTGCCTGGCACCATGCTaGGCTCGGGGTAGGTCTTCA +
Preference number: 3 (lower is better)
Translates to: DILGCGLEEVLTVDEAAWCLAPC*ARGRSS
Trigger: TGAAGACCTACCCCGAGCCAAGCATGGTGCCAGGCA...CCAAGCTGCTTCATCAACTGTTAATACTTCTTCCAGCCCGCAACCCAGGATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR TCA 72 bp TTCCGCCTTCGGTCTGTTGCAGTATGGTATCCTGACTaGAGAAAACCACGTGGGGTTGGGAAAGGAAGGACC +
Preference number: 3 (lower is better)
Translates to: FRLRSVAVWYPD*RKPRGVGKGRT
Trigger: GGTCCTTCCTTTCCCAACCCCACGTGGTTTTCTTCAGTCAGGATACCATACTGCAACAGACCGAAGGCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR TCA 72 bp CTGCTTCCGCCTTCGGTCTGTTGCAGTATGGTATCCTaGCTGAAGAAAACCACGTGGGGTTGGGAAAGGAAG +
Preference number: 3 (lower is better)
Translates to: LLPPSVCCSMVS*LKKTTWGWERK
Trigger: CTTCCTTTCCCAACCCCACGTGGTTTTCTTCAGTCAGGATACCATACTGCAACAGACCGAAGGCGGAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 72 bp GTTCTAGGTCACCCTGAGGCTAGCAGCATCCTTCCCTaGATTTTGCAAAAGCTGCACTGGGCTCTTTCCCTT +
Preference number: 3 (lower is better)
Translates to: VLGHPEASSILP*ILQKLHWALSL
Trigger: AAGGGAAAGAGCCCAGTGCAGCTTTTGCAAAATGCAGGGAAGGATGCTGCTAGCCTCAGGGTGACCTAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 72 bp AGAGAGAGCCATGACCAAACCAGAGGGAGAGACACCTaGAGATATCCTGGGTTGCGGGCTGGAAGAAGTATT +
Preference number: 3 (lower is better)
Translates to: RESHDQTRGRDT*RYPGLRAGRSI
Trigger: AATACTTCTTCCAGCCCGCAACCCAGGATATCTGCAGGTGTCTCTCCCTCTGGTTTGGTCATGGCTCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 72 bp TGCAGATCCTTAAAGCCTGGCTTAACAGAAGGCTGCTaGATCCTCATAGCTGCTTCCGCCTTCGGTCTGTTG +
Preference number: 3 (lower is better)
Translates to: CRSLKPGLTEGC*ILIAASAFGLL
Trigger: CAACAGACCGAAGGCGGAAGCAGCTATGAGGATGCAGCAGCCTTCTGTTAAGCCAGGCTTTAAGGATCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CCA 72 bp TCATATCCTCCCTCCTGGTACTTAACCTTAAGCTCATaGCAGACAGCTGAGGAAGTACTCGCAGCAGCAGGG +
Preference number: 3 (lower is better)
Translates to: SYPPSWYLTLSS*QTAEEVLAAAG
Trigger: CCCTGCTGCTGCGAGTACTTCCTCAGCTGTCTGCCATGAGCTTAAGGTTAAGTACCAGGAGGGAGGATATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CAA 90 bp CCCTCCTGGTACTTAACCTTAAGCTCATGGCAGACAGCTGAGGAAGTACTCGCACCAAACCCAACAAGTTaGCCTCATGGCCAGGGCAAA +
Preference number: 3 (lower is better)
Translates to: PSWYLTLSSWQTAEEVLAPNPTS*PHGQGK
Trigger: TTTGCCCTGGCCATGAGGCAAACTTGTTGGGTTTGG...TGCGAGTACTTCCTCAGCTGTCTGCCATGAGCTTAAGGTTAAGTACCAGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CAA 90 bp CTCACACTTCTCACCGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCCCACCTACACTCCTTTTaGTTTCGACCTCCTTTCGAA +
Preference number: 3 (lower is better)
Translates to: LTLLTVQDTLHGQGCLLSHLHSF*FRPPFE
Trigger: TTCGAAAGGAGGTCGAAACAAAAAGGAGTGTAGGTG...GGAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 72 bp TTTTGCAGATCCTTAAAGCCTGGCTTAACAGAAGGCTaGTGCATCCTCATAGCTGCTTCCGCCTTCGGTCTG +
Preference number: 3 (lower is better)
Translates to: FCRSLKPGLTEG*CILIAASAFGL
Trigger: CAGACCGAAGGCGGAAGCAGCTATGAGGATGCAGCAGCCTTCTGTTAAGCCAGGCTTTAAGGATCTGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CAA 90 bp AGTGCTCGCAGCCTCACAGATCGAACGACTTCCTACAACCTGTCACTTCTGTTTATCCTTCCCTGCATTTaGCAAAAGCTGCACTGGGCT +
Preference number: 3 (lower is better)
Translates to: SARSLTDRTTSYNLSLLFILPCI*QKLHWA
Trigger: AGCCCAGTGCAGCTTTTGCAAAATGCAGGGAAGGAT...AAACAGAAGTGACAGGTTGTAGGAAGTCGTTCGATCTGTGAGGCTGCGAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 72 bp GTTTCATGGCAGTTAGGTAAATCCCAGGCACTGAAGTaGTCGCAGCCTCACAGATCGAACGACTTCCTACAA +
Preference number: 3 (lower is better)
Translates to: VSWQLGKSQALK*SQPHRSNDFLQ
Trigger: TTGTAGGAAGTCGTTCGATCTGTGAGGCTGCGAGCACTTCAGTGCCTGGGATTTACCTAACTGCCATGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CCA 72 bp AGACAAAGGAGCCAGATGCTCTCTCCTCGCATGTTCTaGAAGCTACAGAATGAACACATGCCTGAGGTTTGC +
Preference number: 3 (lower is better)
Translates to: RQRSQMLSPRMF*KLQNEHMPEVC
Trigger: GCAAACCTCAGGCATGTGTTCATTCTGTAGCTTCCAGAACATGCGAGGAGAGAGCATCTGGCTCCTTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CAA 90 bp CATCAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTAGGCATGGCCATGTGTaGTGGCCAACAGAAAGTGAG +
Preference number: 3 (lower is better)
Translates to: HQIAKESGVVDFCHLNTLRHGHV*WPTESE
Trigger: CTCACTTTCTGTTGGCCACAACACATGGCCATGCCT...AAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CAA 90 bp GATATCCTGGGTTGCGGGCTGGAAGAAGTATTAACAGTTGATGAAGCAGCTTGGGATCTGCCACACATTTaGCGACTCCTTGAGAACCAT +
Preference number: 3 (lower is better)
Translates to: DILGCGLEEVLTVDEAAWDLPHI*RLLENH
Trigger: ATGGTTCTCAAGGAGTCGCAAAATGTGTGGCAGATC...CCAAGCTGCTTCATCAACTGTTAATACTTCTTCCAGCCCGCAACCCAGGATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 72 bp TTAGGGTTATGTGTTTTTCTCCAAACCCAACAAGTTTaGCTCATGGCCAGGGCAAAGTGTGTGGAGCCCATT +
Preference number: 3 (lower is better)
Translates to: LGLCVFLQTQQV*LMARAKCVEPI
Trigger: AATGGGCTCCACACACTTTGCCCTGGCCATGAGGCAAACTTGTTGGGTTTGGAGAAAAACACATAACCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CCA 72 bp CTGACACATGCTGAATGCTGGATAATCAGTGTTTCATaGCAGTTAGGTAAATCCCAGGCACTGAAGTGCTCG +
Preference number: 3 (lower is better)
Translates to: LTHAECWIISVS*QLGKSQALKCS
Trigger: CGAGCACTTCAGTGCCTGGGATTTACCTAACTGCCATGAAACACTGATTATCCAGCATTCAGCATGTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CAA 90 bp AGTGCTCGCAGCCTCACAGATCGAACGACTTCCTACAACCTGTCACTTCTGTTTTGGACAAACCACTTGTaGCTTATTTCCACACAGTTA +
Preference number: 3 (lower is better)
Translates to: SARSLTDRTTSYNLSLLFWTNHL*LISTQL
Trigger: TAACTGTGTGGAAATAAGCAACAAGTGGTTTGTCCA...AAACAGAAGTGACAGGTTGTAGGAAGTCGTTCGATCTGTGAGGCTGCGAGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 72 bp AATGAATCCTTATTTATAAAAAGTTACACCCACTGCTaGTCAGGGCTGCCGGCTGGTGTAAACTGCCAGTGT +
Preference number: 3 (lower is better)
Translates to: NESLFIKSYTHC*SGLPAGVNCQC
Trigger: ACACTGGCAGTTTACACCAGCCGGCAGCCCTGAGCAGCAGTGGGTGTAACTTTTTATAAATAAGGATTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 72 bp ATCAATGAATCCTTATTTATAAAAAGTTACACCCACTaGTGCTCAGGGCTGCCGGCTGGTGTAAACTGCCAG +
Preference number: 3 (lower is better)
Translates to: INESLFIKSYTH*CSGLPAGVNCQ
Trigger: CTGGCAGTTTACACCAGCCGGCAGCCCTGAGCAGCAGTGGGTGTAACTTTTTATAAATAAGGATTCATTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 72 bp TTCTGGAAGCTACAGAATGAACACATGCCTGAGGTTTaGCCAATCATATCCTCCCTCCTGGTACTTAACCTT +
Preference number: 3 (lower is better)
Translates to: FWKLQNEHMPEV*PIISSLLVLNL
Trigger: AAGGTTAAGTACCAGGAGGGAGGATATGATTGGGCAAACCTCAGGCATGTGTTCATTCTGTAGCTTCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CCA 72 bp CCCAACAAGTTTGCCTCATGGCCAGGGCAAAGTGTGTaGAGCCCATTTGAGATCATTTTTAGTAAGTTACTA +
Preference number: 3 (lower is better)
Translates to: PNKFASWPGQSV*SPFEIIFSKLL
Trigger: TAGTAACTTACTAAAAATGATCTCAAATGGGCTCCACACACTTTGCCCTGGCCATGAGGCAAACTTGTTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CCA 72 bp TTCAGGATATTCGTAAAGCACACGGGAAACAAATCATaGATGATCTGCCACACATTTTGCGACTCCTTGAGA +
Preference number: 3 (lower is better)
Translates to: FRIFVKHTGNKS*MICHTFCDSLR
Trigger: TCTCAAGGAGTCGCAAAATGTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR TCA 72 bp CATTCTGGCACTCAGGTTCCTAGAGCTGGCTTTTGTTaGCAGCATGTGTACAGAGCATGTTATTTTAATGTT +
Preference number: 3 (lower is better)
Translates to: HSGTQVPRAGFC*QHVYRACYFNV
Trigger: AACATTAAAATAACATGCTCTGTACACATGCTGTCAACAAAAGCCAGCTCTAGGAACCTGAGTGCCAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR GCA 72 bp TATTTCATCAGTAGGAGTGGCATCGTTTTACATTTTTaGAGATCCTTAAAGCCTGGCTTAACAGAAGGCTGC +
Preference number: 3 (lower is better)
Translates to: YFISRSGIVLHF*RSLKPGLTEGC
Trigger: GCAGCCTTCTGTTAAGCCAGGCTTTAAGGATCTGCAAAAATGTAAAACGATGCCACTCCTACTGATGAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CAA 90 bp AAAAATTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCTCTCAAACATTACTCTaGCAGGATCCAGCTTCTGCC +
Preference number: 3 (lower is better)
Translates to: KNFRIFVKHTGNKSWMICSQTLL*QDPASA
Trigger: GGCAGAAGCTGGATCCTGCAAGAGTAATGTTTGAGA...GCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR-3UTR CAA 90 bp TTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACGTGTGTGGAGCCCATTaGAGATCATTTTTAGTAAGT +
Preference number: 3 (lower is better)
Translates to: FQDIRKAHGKQIMDDLPHVCGAH*RSFLVS
Trigger: ACTTACTAAAAATGATCTCAAATGGGCTCCACACAC...GTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR TCA 72 bp ATCACAGGAGAAATAGTTACAGAATCTGACACATGCTaGATGCTGGATAATCAGTGTTTCATGGCAGTTAGG +
Preference number: 3 (lower is better)
Translates to: ITGEIVTESDTC*MLDNQCFMAVR
Trigger: CCTAACTGCCATGAAACACTGATTATCCAGCATTCAGCATGTGTCAGATTCTGTAACTATTTCTCCTGTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp CACGGAGTGACAGCCCCCTGTGTGGACTGTGCTTGTTCCTTGGCCATGCACTGCCCGGGAGGCGGAGGCTaGGGCGAGCTGAGATCAAGA +
Preference number: 4 (lower is better)
Translates to: HGVTAPCVDCACSLAMHCPGGGG*GELRSR
Trigger: TCTTGATCTCAGCTCGCCGCAGCCTCCGCCTCCCGG...GCAGTGCATGGCCAAGGAACAAGCACAGTCCACACAGGGGGCTGTCACTCCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp TGCTGCTCAGGGCTGCCGGCTGGTGTAAACTGCCAGTGTGAGAGAGACAGAGCGCATGGCTGGGCTCCCTaGGCCCAGGCTTCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: CCSGLPAGVNCQCERDRAHGWAP*AQASPF
Trigger: GAAAGGCGAAGCCTGGGCGCAGGGAGCCCAGCCATG...CGCTCTGTCTCTCTCACACTGGCAGTTTACACCAGCCGGCAGCCCTGAGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp TTGTGGGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGAGCGGCCCGCGACCTTaGGCGGACGCTTCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: LWVSCCQWWWLWQVLHLQSGPRP*ADASRR
Trigger: TCGCCTGGAAGCGTCCGCCCAAGGTCGCGGGCCGCT...CTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACCCACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp TTGTGGGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGAGAGGCCGGAACACGTaGACGCGCGGTCACGTGGCC +
Preference number: 4 (lower is better)
Translates to: LWVSCCQWWWLWQVLHLQRGRNT*TRGHVA
Trigger: GGCCACGTGACCGCGCGTGCACGTGTTCCGGCCTCT...CTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACCCACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp TTGTGGGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGGCGGCGGTTACAAACTaGGCGCTGCCTCGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: LWVSCCQWWWLWQVLHLQAAVTN*ALPRSR
Trigger: GCGGGACCGAGGCAGCGCCCAGTTTGTAACCGCCGC...CTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACCCACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp TTGTGGGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGCAAGCCGGCTCCGCGTaGACGAATGCCGGGACGACC +
Preference number: 4 (lower is better)
Translates to: LWVSCCQWWWLWQVLHLQQAGSA*TNAGTT
Trigger: GGTCGTCCCGGCATTCGTCCACGCGGAGCCGGCTTG...CTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACCCACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CAA 72 bp CTCGCAGCAGCAGGGGTGCAGCTGGAGGCTCCCTTTTaGTGGGTGTCATGCTGTCAGTGGTGGTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LAAAGVQLEAPF*WVSCCQWWWLW
Trigger: CCACAGCCACCACCACTGACAGCATGACACCCACAAAAAGGGAGCCTCCAGCTGCACCCCTGCTGCTGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp CGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCCACTGCATCCCCACTCTCCGCGTGGACGAATaGCGGGACGACCAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RTGHFAWAGLFALHCIPTLRVDE*RDDQEE
Trigger: CTCCTCCTGGTCGTCCCGGCATTCGTCCACGCGGAG...AGTGGGGATGCAGTGGAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp CTCACACTTCTCACCGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCCAGGCCTCTCCCTCGGTaGGGTAGCGAGGGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: LTLLTVQDTLHGQGCLLSRPLPR*GSEGCG
Trigger: CCCGCAACCCTCGCTACCGCACCGAGGGAGAGGCCT...GGAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp CACGGAGTGACAGCCCCCTGTGTGGACTGTGCTTGTTCCTTGGCCATGCACTGCTTCTACCTACATGGCTaGGCTCCCTGCGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: HGVTAPCVDCACSLAMHCFYLHG*APCAQA
Trigger: AGCCTGGGCGCAGGGAGCCCAGCCATGTAGGTAGAA...GCAGTGCATGGCCAAGGAACAAGCACAGTCCACACAGGGGGCTGTCACTCCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CAA 72 bp AGGTCACGGAGTGACAGCCCCCTGTGTGGACTGTGCTaGTTCCTTGGCCATGCACTGCCTCACCCCACAGAG +
Preference number: 4 (lower is better)
Translates to: RSRSDSPLCGLC*FLGHALPHPTE
Trigger: CTCTGTGGGGTGAGGCAGTGCATGGCCAAGGAACAAGCACAGTCCACACAGGGGGCTGTCACTCCGTGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp CACGGAGTGACAGCCCCCTGTGTGGACTGTGCTTGTTCCTTGGCCATGCACTGCTGGGAGCCTGATTTCTaGGGTGCGCGCATGGGAAGA +
Preference number: 4 (lower is better)
Translates to: HGVTAPCVDCACSLAMHCWEPDF*GARMGR
Trigger: TCTTCCCATGCGCGCACCTCAGAAATCAGGCTCCCA...GCAGTGCATGGCCAAGGAACAAGCACAGTCCACACAGGGGGCTGTCACTCCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp CACGGAGTGACAGCCCCCTGTGTGGACTGTGCTTGTTCCTTGGCCATGCACTGCGGAAAGGAAGGACCTTaGGGACCCTCAGGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: HGVTAPCVDCACSLAMHCGKEGP*GPSGVL
Trigger: AAGGACCCCTGAGGGTCCTCAAGGTCCTTCCTTTCC...GCAGTGCATGGCCAAGGAACAAGCACAGTCCACACAGGGGGCTGTCACTCCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp CACGGAGTGACAGCCCCCTGTGTGGACTGTGCTTGTTCCTTGGCCATGCACTGCAAATGGTCCCTGTGGTaGAGCCCTGCCTGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: HGVTAPCVDCACSLAMHCKWSLW*SPAWVS
Trigger: GGAAACCCAGGCAGGGCTGCACCACAGGGACCATTT...GCAGTGCATGGCCAAGGAACAAGCACAGTCCACACAGGGGGCTGTCACTCCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp GGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGCAAATAGGGCCAGGTGGGGATaGCCTCCCTCACCGTCTGCT +
Preference number: 4 (lower is better)
Translates to: GVMLSVVVAVASAASPANRARWG*PPSPSA
Trigger: AGCAGACGGTGAGGGAGGCCATCCCCACCTGGCCCT...ATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp TGCTGCTCAGGGCTGCCGGCTGGTGTAAACTGCCAGTGTGAGAGAGACAGAGCGGCCGAGGGCATGGTGTaGCAGCCGACTTTAACCCAT +
Preference number: 4 (lower is better)
Translates to: CCSGLPAGVNCQCERDRAAEGMV*QPTLTH
Trigger: ATGGGTTAAAGTCGGCTGCCACACCATGCCCTCGGC...CGCTCTGTCTCTCTCACACTGGCAGTTTACACCAGCCGGCAGCCCTGAGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CAA 72 bp GCTCCCTGCGCCCAGGCTTCGCCTTTCCAAAGCGCCTaGCATAGCCCTCCGGAGAAACTTTGGATTCCAGCA +
Preference number: 4 (lower is better)
Translates to: APCAQASPFQSA*HSPPEKLWIPA
Trigger: TGCTGGAATCCAAAGTTTCTCCGGAGGGCTATGCAAGGCGCTTTGGAAAGGCGAAGCCTGGGCGCAGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp CACGGAGTGACAGCCCCCTGTGTGGACTGTGCTTGTTCCTTGGCCATGCACTGCGTAAATCCCAGGCACTaGAGTGCTCGCAGCCTCACA +
Preference number: 4 (lower is better)
Translates to: HGVTAPCVDCACSLAMHCVNPRH*SARSLT
Trigger: TGTGAGGCTGCGAGCACTTCAGTGCCTGGGATTTAC...GCAGTGCATGGCCAAGGAACAAGCACAGTCCACACAGGGGGCTGTCACTCCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp CACGGAGTGACAGCCCCCTGTGTGGACTGTGCTTGTTCCTTGGCCATGCACTGCCCTGTGCTTCTGCCATaGGAAAGAACACGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: HGVTAPCVDCACSLAMHCPVLLP*ERTRPK
Trigger: CTTGGGCCGTGTTCTTTCTCATGGCAGAAGCACAGG...GCAGTGCATGGCCAAGGAACAAGCACAGTCCACACAGGGGGCTGTCACTCCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp TTGTGGGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGGCAGCAGCAGGTGGATaGCCACAGCGATCAGCATGG +
Preference number: 4 (lower is better)
Translates to: LWVSCCQWWWLWQVLHLQAAAGG*PQRSAW
Trigger: CCATGCTGATCGCTGTGGGCATCCACCTGCTGCTGC...CTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACCCACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp TGCTGCTCAGGGCTGCCGGCTGGTGTAAACTGCCAGTGTGAGAGAGACAGAGCGAAAAGTTACACCCACTaGTGCTCAGGGCTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: CCSGLPAGVNCQCERDRAKSYTH*CSGLPA
Trigger: AGCCGGCAGCCCTGAGCAGCAGTGGGTGTAACTTTT...CGCTCTGTCTCTCTCACACTGGCAGTTTACACCAGCCGGCAGCCCTGAGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp TGCTGCTCAGGGCTGCCGGCTGGTGTAAACTGCCAGTGTGAGAGAGACAGAGCGTGTAAACTGCCAGTGTaGGAGAGACAGAGCGAGCTC +
Preference number: 4 (lower is better)
Translates to: CCSGLPAGVNCQCERDRACKLPV*ERQSEL
Trigger: GAGCTCGCTCTGTCTCTCTCACACTGGCAGTTTACA...CGCTCTGTCTCTCTCACACTGGCAGTTTACACCAGCCGGCAGCCCTGAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp GGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGCAAATGTTGTGGAGCAGACGTaGTCAGACCCCCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GVMLSVVVAVASAASPANVVEQT*SDPQPG
Trigger: TCCAGGCTGGGGGTCTGATCACGTCTGCTCCACAAC...ATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp TGCTGCTCAGGGCTGCCGGCTGGTGTAAACTGCCAGTGTGAGAGAGACAGAGCGCAGGGGCTGTATTTGTaGTTGCAAGGTAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: CCSGLPAGVNCQCERDRAQGLYL*LQGRAW
Trigger: CCAAGCCCTACCTTGCAAGCACAAATACAGCCCCTG...CGCTCTGTCTCTCTCACACTGGCAGTTTACACCAGCCGGCAGCCCTGAGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp TGCTGCTCAGGGCTGCCGGCTGGTGTAAACTGCCAGTGTGAGAGAGACAGAGCGCTTTCCAAAGCGCCTTaGATAGCCCTCCGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: CCSGLPAGVNCQCERDRALSKAP*IALRRN
Trigger: GTTTCTCCGGAGGGCTATGCAAGGCGCTTTGGAAAG...CGCTCTGTCTCTCTCACACTGGCAGTTTACACCAGCCGGCAGCCCTGAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CAA 72 bp TGCTGCTTCAACCAGGGACCCAGAATACGGGACATGTaGTGGAGCAGACGTGATCAGACCCCCAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: CCFNQGPRIRDM*WSRRDQTPSLE
Trigger: CTCCAGGCTGGGGGTCTGATCACGTCTGCTCCACAACATGTCCCGTATTCTGGGTCCCTGGTTGAAGCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp GATATCCTGGGTTGCGGGCTGGAAGAAGTATTAACAGTTGATGAAGCAGCTTGGTTACAAACTGGGCGCTaGCTCGGTCCCGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: DILGCGLEEVLTVDEAAWLQTGR*LGPAAA
Trigger: GGCGGCGGCGGGACCGAGGCAGCGCCCAGTTTGTAA...CCAAGCTGCTTCATCAACTGTTAATACTTCTTCCAGCCCGCAACCCAGGATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp CTCACACTTCTCACCGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCCCTGTTTGCTCTCCACTaGATCCCCACTGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LTLLTVQDTLHGQGCLLSLFALH*IPTAWH
Trigger: GTGCCAGGCAGTGGGGATGCAGTGGAGAGCAAACAG...GGAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp GAAGTGCTCGCAGCCTCACAGATCGAACGACTTCCTACAACCTGTCACTTCTGTGGCCAGTGGTCCCACTaGAGCCTCCAAACCTGCCTC +
Preference number: 4 (lower is better)
Translates to: EVLAASQIERLPTTCHFCGQWSH*SLQTCL
Trigger: GAGGCAGGTTTGGAGGCTGCAGTGGGACCACTGGCC...ACAGAAGTGACAGGTTGTAGGAAGTCGTTCGATCTGTGAGGCTGCGAGCACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp GGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGCAAATTCCTTGGCCATGCACTaGCTCACCCCACAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GVMLSVVVAVASAASPANSLAMH*LTPQRS
Trigger: TGACCTCTGTGGGGTGAGGCAGTGCATGGCCAAGGA...ATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp CTCACACTTCTCACCGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCCCAGTGGTGGTGGCTGTaGCAAGTGCTGCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: LTLLTVQDTLHGQGCLLSQWWWL*QVLHLQ
Trigger: CTGGAGATGCAGCACTTGCCACAGCCACCACCACTG...GGAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp TTGTGGGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGTGCTGTCAGTGGTGGTaGCTGTGGCAAGTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: LWVSCCQWWWLWQVLHLQCCQWW*LWQVLH
Trigger: ATGCAGCACTTGCCACAGCCACCACCACTGACAGCA...CTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACCCACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CAA 72 bp TGGGTGCAGCTCACACTTCTCACCGTACAGGACACTTaGCATGGGCAGGGCTGTTTGCTCTCCACTGCATCC +
Preference number: 4 (lower is better)
Translates to: WVQLTLLTVQDT*HGQGCLLSTAS
Trigger: GGATGCAGTGGAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAGCTGCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp CCCTCCTGGTACTTAACCTTAAGCTCATGGCAGACAGCTGAGGAAGTACTCGCAAGTAGCTCCATTGGATaGTGCCGTCCAGGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: PSWYLTLSSWQTAEEVLASSSIG*CRPGGG
Trigger: CCCTCCGCCTGGACGGCATCATCCAATGGAGCTACT...TGCGAGTACTTCCTCAGCTGTCTGCCATGAGCTTAAGGTTAAGTACCAGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp GGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGCAAATGACACCTGCTTCTACTaGCCACTTCCGGTTAAGGCC +
Preference number: 4 (lower is better)
Translates to: GVMLSVVVAVASAASPANDTCFY*PLPVKA
Trigger: GGCCTTAACCGGAAGTGGTCAGTAGAAGCAGGTGTC...ATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp CACGGAGTGACAGCCCCCTGTGTGGACTGTGCTTGTTCCTTGGCCATGCACTGCGTTTGGCCCTTAAAATaGCACCTGCTTCTACTGACC +
Preference number: 4 (lower is better)
Translates to: HGVTAPCVDCACSLAMHCVWPLK*HLLLLT
Trigger: GGTCAGTAGAAGCAGGTGTCATTTTAAGGGCCAAAC...GCAGTGCATGGCCAAGGAACAAGCACAGTCCACACAGGGGGCTGTCACTCCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp CCCTCCTGGTACTTAACCTTAAGCTCATGGCAGACAGCTGAGGAAGTACTCGCACCACTGCATCCCCACTaGCTGGCACCATGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PSWYLTLSSWQTAEEVLAPLHPH*LAPCLA
Trigger: AGCCAAGCATGGTGCCAGGCAGTGGGGATGCAGTGG...TGCGAGTACTTCCTCAGCTGTCTGCCATGAGCTTAAGGTTAAGTACCAGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp GCTCACACTTCTCACCGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCCCGTACAGGACACTTTaGATGGGCAGGGCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: AHTSHRTGHFAWAGLFALPYRTL*MGRAVC
Trigger: GCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGG...GAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp GCTCACACTTCTCACCGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCGGCCTCCTGTGCTTCTaGCATGAGAAAGAACACGGC +
Preference number: 4 (lower is better)
Translates to: AHTSHRTGHFAWAGLFALGLLCF*HEKEHG
Trigger: GCCGTGTTCTTTCTCATGGCAGAAGCACAGGAGGCC...GAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp TTGTGGGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGGGGCTTGGCCTCCTGTaGTTCTGCCATGAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: LWVSCCQWWWLWQVLHLQGLGLL*FCHEKE
Trigger: TTCTTTCTCATGGCAGAAGCACAGGAGGCCAAGCCC...CTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACCCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp CGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCCACTGCATCCCCACTGGCTGTATTTGTGCTTaGAAGGTAGGGCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RTGHFAWAGLFALHCIPTGCICA*KVGLGL
Trigger: GAGGCCAAGCCCTACCTTGCAAGCACAAATACAGCC...AGTGGGGATGCAGTGGAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp GCTCACACTTCTCACCGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCCTTGTTCCTTGGCCATaGACTGCCTCACCCCACAGA +
Preference number: 4 (lower is better)
Translates to: AHTSHRTGHFAWAGLFALLVPWP*TASPHR
Trigger: TCTGTGGGGTGAGGCAGTGCATGGCCAAGGAACAAG...GAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp GGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGCAAATGGCTGTGGCAAGTGCTaGATCTCCAGCAAATGGTCC +
Preference number: 4 (lower is better)
Translates to: GVMLSVVVAVASAASPANGCGKC*ISSKWS
Trigger: GGACCATTTGCTGGAGATGCAGCACTTGCCACAGCC...ATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp GAAGTGCTCGCAGCCTCACAGATCGAACGACTTCCTACAACCTGTCACTTCTGTTCGCAGCAGCAGGGGTaGAGCTGGAGGCTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: EVLAASQIERLPTTCHFCSQQQG*SWRLPF
Trigger: AAAAGGGAGCCTCCAGCTGCACCCCTGCTGCTGCGA...ACAGAAGTGACAGGTTGTAGGAAGTCGTTCGATCTGTGAGGCTGCGAGCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp CACGGAGTGACAGCCCCCTGTGTGGACTGTGCTTGTTCCTTGGCCATGCACTGCCTGAAAGTGCGAACCTaGAAAGCAAGTCTCTTACCC +
Preference number: 4 (lower is better)
Translates to: HGVTAPCVDCACSLAMHCLKVRT*KASLLP
Trigger: GGGTAAGAGACTTGCTTTCCAGGTTCGCACTTTCAG...GCAGTGCATGGCCAAGGAACAAGCACAGTCCACACAGGGGGCTGTCACTCCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp GAAGTGCTCGCAGCCTCACAGATCGAACGACTTCCTACAACCTGTCACTTCTGTGGGACCCCTCAGGTTTaGGAGTTTGCACCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: EVLAASQIERLPTTCHFCGTPQV*EFAPGA
Trigger: GGCACCTGGTGCAAACTCCCAAACCTGAGGGGTCCC...ACAGAAGTGACAGGTTGTAGGAAGTCGTTCGATCTGTGAGGCTGCGAGCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp GCTCACACTTCTCACCGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCTCATGCTGTCAGTGGTaGTGGCTGTGGCAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: AHTSHRTGHFAWAGLFALSCCQW*WLWQVL
Trigger: CAGCACTTGCCACAGCCACCACCACTGACAGCATGA...GAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp CGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCCACTGCATCCCCACTGAGGCTCCCTTTTTGTaGGTGTCATGCTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: RTGHFAWAGLFALHCIPTEAPFL*VSCCQW
Trigger: CCACTGACAGCATGACACCCACAAAAAGGGAGCCTC...AGTGGGGATGCAGTGGAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CAA 72 bp GGTCACCCTGAGGCTAGCAGCATCCTTCCCTGCATTTaGCAAAAGCTGCACTGGGCTCTTTCCCTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: GHPEASSILPCI*QKLHWALSLCG
Trigger: CCCACAAAGGGAAAGAGCCCAGTGCAGCTTTTGCAAAATGCAGGGAAGGATGCTGCTAGCCTCAGGGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp TTGTGGGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGATCTCAAACACGGCGTaGGACGAGTGTTTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: LWVSCCQWWWLWQVLHLQISNTA*DECLKP
Trigger: AGGCTTCAAACACTCGTCTCACGCCGTGTTTGAGAT...CTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACCCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp CCCTCCTGGTACTTAACCTTAAGCTCATGGCAGACAGCTGAGGAAGTACTCGCACTCATGGCAGACAGCTaGGGAAGTACTCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PSWYLTLSSWQTAEEVLALMADS*GSTRSS
Trigger: GCTGCTGCGAGTACTTCCTCAGCTGTCTGCCATGAG...TGCGAGTACTTCCTCAGCTGTCTGCCATGAGCTTAAGGTTAAGTACCAGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp GGTTATGTGTTTTTCTCCAAACCCAACAAGTTTGCCTCATGGCCAGGGCAAAGTGCAGCCAGAAGTGGGTaGCCCTCTCCACCCTGTCGC +
Preference number: 4 (lower is better)
Translates to: GYVFFSKPNKFASWPGQSAARSG*PSPPCR
Trigger: GCGACAGGGTGGAGAGGGGCACCCACTTCTGGCTGC...ACTTTGCCCTGGCCATGAGGCAAACTTGTTGGGTTTGGAGAAAAACACATAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CAA 72 bp GTGTTGTGGCCAACAGAAAGTGAGCAGGGGCTGTATTaGTGCTTGCAAGGTAGGGCTTGGCCTCCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: VLWPTESEQGLY*CLQGRAWPPVL
Trigger: AAGCACAGGAGGCCAAGCCCTACCTTGCAAGCACAAATACAGCCCCTGCTCACTTTCTGTTGGCCACAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp CCCTCCTGGTACTTAACCTTAAGCTCATGGCAGACAGCTGAGGAAGTACTCGCATCCTGCCCGGCTGAATaGCCTGTATCCCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: PSWYLTLSSWQTAEEVLASCPAE*PVSQQL
Trigger: AAGCTGTTGGGATACAGGTCATTCAGCCGGGCAGGA...TGCGAGTACTTCCTCAGCTGTCTGCCATGAGCTTAAGGTTAAGTACCAGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp ATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACATTTTGCTGCGGTAGCGAGGGTTaGGGGCCCAAACGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: IFVKHTGNKSWMICHTFCCGSEG*GPKRPR
Trigger: GCGCGGGCGTTTGGGCCCGCAACCCTCGCTACCGCA...GCAAAATGTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp GGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGCAAATCAAACCCAACAAGTTTaGCTCATGGCCAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: GVMLSVVVAVASAASPANQTQQV*LMARAK
Trigger: CTTTGCCCTGGCCATGAGGCAAACTTGTTGGGTTTG...ATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp GAAGTGCTCGCAGCCTCACAGATCGAACGACTTCCTACAACCTGTCACTTCTGTTCCTCCAGCACTGCCTaGCCATGCACCCCTAAATCT +
Preference number: 4 (lower is better)
Translates to: EVLAASQIERLPTTCHFCSSSTA*PCTPKS
Trigger: AGATTTAGGGGTGCATGGGCAGGCAGTGCTGGAGGA...ACAGAAGTGACAGGTTGTAGGAAGTCGTTCGATCTGTGAGGCTGCGAGCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp GGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGCAAATTCAGGTTTGGGAGTTTaGACCAGGTGCCAACAAGCT +
Preference number: 4 (lower is better)
Translates to: GVMLSVVVAVASAASPANSGLGV*TRCQQA
Trigger: AGCTTGTTGGCACCTGGTGCAAACTCCCAAACCTGA...ATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp GAAGTGCTCGCAGCCTCACAGATCGAACGACTTCCTACAACCTGTCACTTCTGTGGTGGCTGTGGCAAGTaGTGCATCTCCAGCAAATGG +
Preference number: 4 (lower is better)
Translates to: EVLAASQIERLPTTCHFCGGCGK*CISSKW
Trigger: CCATTTGCTGGAGATGCAGCACTTGCCACAGCCACC...ACAGAAGTGACAGGTTGTAGGAAGTCGTTCGATCTGTGAGGCTGCGAGCACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp CCCTCCTGGTACTTAACCTTAAGCTCATGGCAGACAGCTGAGGAAGTACTCGCACACCTGCAGATATCCTaGGTTGCGGGCTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PSWYLTLSSWQTAEEVLAHLQIS*VAGWKK
Trigger: CTTCTTCCAGCCCGCAACCCAGGATATCTGCAGGTG...TGCGAGTACTTCCTCAGCTGTCTGCCATGAGCTTAAGGTTAAGTACCAGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp CGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCCACTGCATCCCCACTCAGATCCTTAAAGCCTaGCTTAACAGAAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RTGHFAWAGLFALHCIPTQILKA*LNRRLL
Trigger: CAGCAGCCTTCTGTTAAGCCAGGCTTTAAGGATCTG...AGTGGGGATGCAGTGGAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CAA 72 bp CTGCATTTTGCAAAAGCTGCACTGGGCTCTTTCCCTTaGTGGGTGCAGCTCACACTTCTCACCGTACAGGAC +
Preference number: 4 (lower is better)
Translates to: LHFAKAALGSFP*WVQLTLLTVQD
Trigger: GTCCTGTACGGTGAGAAGTGTGAGCTGCACCCACAAAGGGAAAGAGCCCAGTGCAGCTTTTGCAAAATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp GAAGTGCTCGCAGCCTCACAGATCGAACGACTTCCTACAACCTGTCACTTCTGTACCAGCCACGGCCAGTaGATAATCCTGTCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: EVLAASQIERLPTTCHFCTSHGQ*IILSSF
Trigger: AAAGCTGGACAGGATTATTCACTGGCCGTGGCTGGT...ACAGAAGTGACAGGTTGTAGGAAGTCGTTCGATCTGTGAGGCTGCGAGCACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp TGCTGCTCAGGGCTGCCGGCTGGTGTAAACTGCCAGTGTGAGAGAGACAGAGCGTCTCCATCTTTCCAATaGCAAGTAATGCTTCACACT +
Preference number: 4 (lower is better)
Translates to: CCSGLPAGVNCQCERDRASPSFQ*QVMLHT
Trigger: AGTGTGAAGCATTACTTGTCATTGGAAAGATGGAGA...CGCTCTGTCTCTCTCACACTGGCAGTTTACACCAGCCGGCAGCCCTGAGCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp GGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGCAAATAGAGCTGGCTTTTGTTaGCAGCATGTGTACAGAGCA +
Preference number: 4 (lower is better)
Translates to: GVMLSVVVAVASAASPANRAGFC*QHVYRA
Trigger: TGCTCTGTACACATGCTGTCAACAAAAGCCAGCTCT...ATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp CGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCCACTGCATCCCCACTTGGACTTTTGTCATCTaGACACCCTTCCTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: RTGHFAWAGLFALHCIPTWTFVI*TPFLLG
Trigger: TCCCAAAAGGAAGGGTGTTCAGATGACAAAAGTCCA...AGTGGGGATGCAGTGGAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp CCCTCCTGGTACTTAACCTTAAGCTCATGGCAGACAGCTGAGGAAGTACTCGCACTTTCCCTTTGTGGGTaGAGCTCACACTTCTCACCG +
Preference number: 4 (lower is better)
Translates to: PSWYLTLSSWQTAEEVLALSLCG*SSHFSP
Trigger: CGGTGAGAAGTGTGAGCTGCACCCACAAAGGGAAAG...TGCGAGTACTTCCTCAGCTGTCTGCCATGAGCTTAAGGTTAAGTACCAGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp CCTAGGGAAGGGATAAACCACTGTCTTTTTGTGAGGCATGGTTGTGTTATGTCAACCAGCAGCCAGAAGTaGGTGCCCCTCTCCACCCTG +
Preference number: 4 (lower is better)
Translates to: PREGINHCLFVRHGCVMSTSSQK*VPLSTL
Trigger: CAGGGTGGAGAGGGGCACCCACTTCTGGCTGCTGGT...TGACATAACACAACCATGCCTCACAAAAAGACAGTGGTTTATCCCTTCCCTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp GAAGTGCTCGCAGCCTCACAGATCGAACGACTTCCTACAACCTGTCACTTCTGTGTGGAGGGGAGGCACTaGGCTCCTGAAAACAAAGAT +
Preference number: 4 (lower is better)
Translates to: EVLAASQIERLPTTCHFCVEGRH*APENKD
Trigger: ATCTTTGTTTTCAGGAGCCCAGTGCCTCCCCTCCAC...ACAGAAGTGACAGGTTGTAGGAAGTCGTTCGATCTGTGAGGCTGCGAGCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp AGTGCTCGCAGCCTCACAGATCGAACGACTTCCTACAACCTGTCACTTCTGTTTTTATCGAGTGAGTTCTaGCAGAGTCCTGCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SARSLTDRTTSYNLSLLFLSSEF*QSPAPS
Trigger: GGAGGGGGCAGGACTCTGCCAGAACTCACTCGATAA...AAACAGAAGTGACAGGTTGTAGGAAGTCGTTCGATCTGTGAGGCTGCGAGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp CCCTCCTGGTACTTAACCTTAAGCTCATGGCAGACAGCTGAGGAAGTACTCGCACAGGTTTGGGATGAATaGACAAGAGGCGAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: PSWYLTLSSWQTAEEVLAQVWDE*TRGEGQ
Trigger: TTGGCCTTCGCCTCTTGTTCATTCATCCCAAACCTG...TGCGAGTACTTCCTCAGCTGTCTGCCATGAGCTTAAGGTTAAGTACCAGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp GCTCACACTTCTCACCGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCAAATCTTTTATCGAGTaGGTTCTGGCAGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: AHTSHRTGHFAWAGLFALKSFIE*VLAESC
Trigger: GCAGGACTCTGCCAGAACTCACTCGATAAAAGATTT...GAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp CAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTCCTTCCCAGGCACTGAAGTaGTCGCAGCCTCACAGATCG +
Preference number: 4 (lower is better)
Translates to: QIAKESGVVDFCHLNTLPSQALK*SQPHRS
Trigger: CGATCTGTGAGGCTGCGAGCACTTCAGTGCCTGGGA...AGGAAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp CATCAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTCGGCCCAAGGTAAGCTaGTGCTTCAACCAGGGACCC +
Preference number: 4 (lower is better)
Translates to: HQIAKESGVVDFCHLNTLRPKVS*CFNQGP
Trigger: GGGTCCCTGGTTGAAGCAGCAGCTTACCTTGGGCCG...AAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp CGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCCACTGCATCCCCACTAAATCATGGATGATCTaGCACACATTTTGCGACTCC +
Preference number: 4 (lower is better)
Translates to: RTGHFAWAGLFALHCIPTKSWMI*HTFCDS
Trigger: GGAGTCGCAAAATGTGTGGCAGATCATCCATGATTT...AGTGGGGATGCAGTGGAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp CCCTCCTGGTACTTAACCTTAAGCTCATGGCAGACAGCTGAGGAAGTACTCGCACACATGCCTGAGGTTTaGCCAATCATATCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: PSWYLTLSSWQTAEEVLAHMPEV*PIISSL
Trigger: GAGGGAGGATATGATTGGGCAAACCTCAGGCATGTG...TGCGAGTACTTCCTCAGCTGTCTGCCATGAGCTTAAGGTTAAGTACCAGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp CATCAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTCAGCAGGGGTGCAGCTaGAGGCTCCCTTTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: HQIAKESGVVDFCHLNTLQQGCS*RLPFCG
Trigger: CCCACAAAAAGGGAGCCTCCAGCTGCACCCCTGCTG...AAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp GAAGTGCTCGCAGCCTCACAGATCGAACGACTTCCTACAACCTGTCACTTCTGTCTGAAGAAAACCACGTaGGGTTGGGAAAGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: EVLAASQIERLPTTCHFCLKKTT*GWERKD
Trigger: GTCCTTCCTTTCCCAACCCCACGTGGTTTTCTTCAG...ACAGAAGTGACAGGTTGTAGGAAGTCGTTCGATCTGTGAGGCTGCGAGCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp GGTTATGTGTTTTTCTCCAAACCCAACAAGTTTGCCTCATGGCCAGGGCAAAGTCGATCAGCATGGCTTTaGACTCCACACAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GYVFFSKPNKFASWPGQSRSAWL*TPHRPL
Trigger: GAGAGGCCTGTGTGGAGTTCAAAGCCATGCTGATCG...ACTTTGCCCTGGCCATGAGGCAAACTTGTTGGGTTTGGAGAAAAACACATAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp GGTTATGTGTTTTTCTCCAAACCCAACAAGTTTGCCTCATGGCCAGGGCAAAGTGGCAAAGGAACGACATaGGGATCCACAGGGGCACAA +
Preference number: 4 (lower is better)
Translates to: GYVFFSKPNKFASWPGQSGKGTT*GSTGAQ
Trigger: TTGTGCCCCTGTGGATCCTCATGTCGTTCCTTTGCC...ACTTTGCCCTGGCCATGAGGCAAACTTGTTGGGTTTGGAGAAAAACACATAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp CTCACACTTCTCACCGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCCGAAACAAATCATGGATaGTCTGCCACACATTTTGCG +
Preference number: 4 (lower is better)
Translates to: LTLLTVQDTLHGQGCLLSETNHG*SATHFA
Trigger: CGCAAAATGTGTGGCAGATCATCCATGATTTGTTTC...GGAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp CCTAGGGAAGGGATAAACCACTGTCTTTTTGTGAGGCATGGTTGTGTTATGTCACTCACCACTGCTAACTaGGGGGCTGGAATGCAGGGT +
Preference number: 4 (lower is better)
Translates to: PREGINHCLFVRHGCVMSLTTAN*GAGMQG
Trigger: ACCCTGCATTCCAGCCCCTCAGTTAGCAGTGGTGAG...TGACATAACACAACCATGCCTCACAAAAAGACAGTGGTTTATCCCTTCCCTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp TTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACAACAGCTTCCTTCACTaGGTCAGGGCCCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FQDIRKAHGKQIMDDLPHNSFLH*VRALAG
Trigger: CCCTGCCAGGGCCCTGACTCAGTGAAGGAAGCTGTT...GTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp GATATCCTGGGTTGCGGGCTGGAAGAAGTATTAACAGTTGATGAAGCAGCTTGGTCTTTCCTGCCCGGCTaGATGACCTGTATCCCAACA +
Preference number: 4 (lower is better)
Translates to: DILGCGLEEVLTVDEAAWSFLPG*MTCIPT
Trigger: TGTTGGGATACAGGTCATTCAGCCGGGCAGGAAAGA...CCAAGCTGCTTCATCAACTGTTAATACTTCTTCCAGCCCGCAACCCAGGATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp CATCAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTTGTCAGGTGGGAGCCTaGTTTCTGAGGTGCGCGCAT +
Preference number: 4 (lower is better)
Translates to: HQIAKESGVVDFCHLNTLCQVGA*FLRCAH
Trigger: ATGCGCGCACCTCAGAAATCAGGCTCCCACCTGACA...AAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp CATCAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTACGTGTGTTCTCCGCTaGTCGGCAACCACATCCAGG +
Preference number: 4 (lower is better)
Translates to: HQIAKESGVVDFCHLNTLTCVLR*SATTSR
Trigger: CCTGGATGTGGTTGCCGAGCAGCGGAGAACACACGT...AAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp AGTGCTCGCAGCCTCACAGATCGAACGACTTCCTACAACCTGTCACTTCTGTTTTCCTTCCCTGCATTTTaGAAAAGCTGCACTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SARSLTDRTTSYNLSLLFSFPAF*KSCTGL
Trigger: GAGCCCAGTGCAGCTTTTGCAAAATGCAGGGAAGGA...AAACAGAAGTGACAGGTTGTAGGAAGTCGTTCGATCTGTGAGGCTGCGAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp CCTAGGGAAGGGATAAACCACTGTCTTTTTGTGAGGCATGGTTGTGTTATGTCAGGAGTTTGCACCAGGTaGCAACAAGCTCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PREGINHCLFVRHGCVMSGVCTR*QQAPGL
Trigger: CAGGCCAGGAGCTTGTTGGCACCTGGTGCAAACTCC...TGACATAACACAACCATGCCTCACAAAAAGACAGTGGTTTATCCCTTCCCTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp GGTTATGTGTTTTTCTCCAAACCCAACAAGTTTGCCTCATGGCCAGGGCAAAGTTCCCTCACCGTCTGCTaGTTCTACCTACATGGCTGG +
Preference number: 4 (lower is better)
Translates to: GYVFFSKPNKFASWPGQSSLTVC*FYLHGW
Trigger: CCAGCCATGTAGGTAGAAGCAGCAGACGGTGAGGGA...ACTTTGCCCTGGCCATGAGGCAAACTTGTTGGGTTTGGAGAAAAACACATAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp GATATCCTGGGTTGCGGGCTGGAAGAAGTATTAACAGTTGATGAAGCAGCTTGGGGCTCTTTCCCTTTGTaGGTGCAGCTCACACTTCTC +
Preference number: 4 (lower is better)
Translates to: DILGCGLEEVLTVDEAAWGSFPL*VQLTLL
Trigger: GAGAAGTGTGAGCTGCACCCACAAAGGGAAAGAGCC...CCAAGCTGCTTCATCAACTGTTAATACTTCTTCCAGCCCGCAACCCAGGATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp CAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTCCTACTGTGCTTGTTCCTTaGCCATGCACTGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: QIAKESGVVDFCHLNTLPTVLVP*PCTASP
Trigger: GGGTGAGGCAGTGCATGGCCAAGGAACAAGCACAGT...AGGAAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp CAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTCCTGTGTCATGCTGTCAGTaGTGGTGGCTGTGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: QIAKESGVVDFCHLNTLPVSCCQ*WWLWQV
Trigger: CACTTGCCACAGCCACCACCACTGACAGCATGACAC...AGGAAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp GCTCACACTTCTCACCGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCTTAACCTTAAGCTCATaGCAGACAGCTGAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: AHTSHRTGHFAWAGLFALLTLSS*QTAEEV
Trigger: TACTTCCTCAGCTGTCTGCCATGAGCTTAAGGTTAA...GAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp CTCACACTTCTCACCGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCCTCTTTTTGTGAGGCATaGTTGTGTTATGTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LTLLTVQDTLHGQGCLLSSFCEA*LCYVRW
Trigger: CCACCTGACATAACACAACCATGCCTCACAAAAAGA...GGAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp CAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTCCTCGAAGAAGAGAGGCATaGAGACCAGCAGCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: QIAKESGVVDFCHLNTLPRRREA*RPAARS
Trigger: ACTTCTGGCTGCTGGTCTTCATGCCTCTCTTCTTCG...AGGAAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp GGTTATGTGTTTTTCTCCAAACCCAACAAGTTTGCCTCATGGCCAGGGCAAAGTGAACAGAGAGAGCCATaGCCAAACCAGAGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: GYVFFSKPNKFASWPGQSEQREP*PNQRER
Trigger: TCTCTCCCTCTGGTTTGGTCATGGCTCTCTCTGTTC...ACTTTGCCCTGGCCATGAGGCAAACTTGTTGGGTTTGGAGAAAAACACATAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp GCTCACACTTCTCACCGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCGGACAAACCACTTGTTaGTTATTTCCACACAGTTAC +
Preference number: 4 (lower is better)
Translates to: AHTSHRTGHFAWAGLFALGQTTC*LFPHSY
Trigger: GTAACTGTGTGGAAATAAGCAACAAGTGGTTTGTCC...GAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp CCTAGGGAAGGGATAAACCACTGTCTTTTTGTGAGGCATGGTTGTGTTATGTCACCCCTGTGTGGACTGTaGTTGTTCCTTGGCCATGCA +
Preference number: 4 (lower is better)
Translates to: PREGINHCLFVRHGCVMSPLCGL*LFLGHA
Trigger: TGCATGGCCAAGGAACAAGCACAGTCCACACAGGGG...TGACATAACACAACCATGCCTCACAAAAAGACAGTGGTTTATCCCTTCCCTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp GAAGTGCTCGCAGCCTCACAGATCGAACGACTTCCTACAACCTGTCACTTCTGTTTTTGCAGCAAAAGCTaGCTGATACATCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: EVLAASQIERLPTTCHFCFCSKS*LIHHRR
Trigger: TCTCCTGTGATGTATCAGTCAGCTTTTGCTGCAAAA...ACAGAAGTGACAGGTTGTAGGAAGTCGTTCGATCTGTGAGGCTGCGAGCACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp ATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACATTTTGCCTTCCCGGATCCCTGTaGACTTGCTGGGCTTCATCC +
Preference number: 4 (lower is better)
Translates to: IFVKHTGNKSWMICHTFCLPGSL*TCWASS
Trigger: GGATGAAGCCCAGCAAGTTCACAGGGATCCGGGAAG...GCAAAATGTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp CCTAGGGAAGGGATAAACCACTGTCTTTTTGTGAGGCATGGTTGTGTTATGTCACCGGCTGGTGTAAACTaGCAGTGTGAGAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: PREGINHCLFVRHGCVMSPAGVN*QCERDR
Trigger: TCTGTCTCTCTCACACTGGCAGTTTACACCAGCCGG...TGACATAACACAACCATGCCTCACAAAAAGACAGTGGTTTATCCCTTCCCTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp GGTTATGTGTTTTTCTCCAAACCCAACAAGTTTGCCTCATGGCCAGGGCAAAGTTTTTTGTGGGTGTCATaGTGTCAGTGGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GYVFFSKPNKFASWPGQSFLWVS*CQWWWL
Trigger: CAGCCACCACCACTGACAGCATGACACCCACAAAAA...ACTTTGCCCTGGCCATGAGGCAAACTTGTTGGGTTTGGAGAAAAACACATAACC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp CCCTCCTGGTACTTAACCTTAAGCTCATGGCAGACAGCTGAGGAAGTACTCGCATACAGAATGAACACATaGCTGAGGTTTGCCCAATCA +
Preference number: 4 (lower is better)
Translates to: PSWYLTLSSWQTAEEVLAYRMNT*LRFAQS
Trigger: TGATTGGGCAAACCTCAGGCATGTGTTCATTCTGTA...TGCGAGTACTTCCTCAGCTGTCTGCCATGAGCTTAAGGTTAAGTACCAGGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp GGTTATGTGTTTTTCTCCAAACCCAACAAGTTTGCCTCATGGCCAGGGCAAAGTAACAAGTTTGCCTCATaGCCAGGGCAAAGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: GYVFFSKPNKFASWPGQSNKFAS*PGQSVW
Trigger: CCACACACTTTGCCCTGGCCATGAGGCAAACTTGTT...ACTTTGCCCTGGCCATGAGGCAAACTTGTTGGGTTTGGAGAAAAACACATAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp CAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTCCTCATGGCCATGTGTTGTaGCCAACAGAAAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: QIAKESGVVDFCHLNTLPHGHVL*PTESEQ
Trigger: CTGCTCACTTTCTGTTGGCCACAACACATGGCCATG...AGGAAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp TTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACTGCATCTCCAGCAAATaGTCCCTGTGGTGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: FQDIRKAHGKQIMDDLPHCISSK*SLWCSP
Trigger: AGGGCTGCACCACAGGGACCATTTGCTGGAGATGCA...GTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp ATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACATTTTGCGCAGGACCTCAAAAGTaGGCAGAGGCACGACAATCG +
Preference number: 4 (lower is better)
Translates to: IFVKHTGNKSWMICHTFCAGPQK*AEARQS
Trigger: CGATTGTCGTGCCTCTGCTCACTTTTGAGGTCCTGC...GCAAAATGTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp TTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACATACTGATGAGGCGGTaGTCTCAAACACGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: FQDIRKAHGKQIMDDLPHILMRR*SQTRRE
Trigger: CTCACGCCGTGTTTGAGATCACCGCCTCATCAGTAT...GTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp AAAAATTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCACTGAGGTCACGGAGTaGCAGCCCCCTGTGTGGACT +
Preference number: 4 (lower is better)
Translates to: KNFRIFVKHTGNKSWMICTEVTE*QPPVWT
Trigger: AGTCCACACAGGGGGCTGTCACTCCGTGACCTCAGT...GCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp ATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACATTTTGCGCAGGATCCAGCTTCTaGCCTGATTCCCTGGTGTAC +
Preference number: 4 (lower is better)
Translates to: IFVKHTGNKSWMICHTFCAGSSF*PDSLVY
Trigger: GTACACCAGGGAATCAGGGCAGAAGCTGGATCCTGC...GCAAAATGTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp CATCAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTGAAGCAGCTTGGCATTaGCTCTCTTTTCTCCTAGGG +
Preference number: 4 (lower is better)
Translates to: HQIAKESGVVDFCHLNTLEAAWH*LSFLLG
Trigger: CCCTAGGAGAAAAGAGAGGCAATGCCAAGCTGCTTC...AAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp AAAAATTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCGAGGCGAAGGCCAAGTaGAGTCTGTGTGTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KNFRIFVKHTGNKSWMICEAKAK*SLCVPG
Trigger: CCCAGGCACACACAGACTCCACTTGGCCTTCGCCTC...GCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp CAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTCCTCCAGGGCAAAGTGTGTaGAGCCCATTTGAGATCATT +
Preference number: 4 (lower is better)
Translates to: QIAKESGVVDFCHLNTLPPGQSV*SPFEII
Trigger: AATGATCTCAAATGGGCTCCACACACTTTGCCCTGG...AGGAAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp ATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACATTTTGCGTGCCAACAAGCTCCTaGCCTGAAACTGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: IFVKHTGNKSWMICHTFCVPTSS*PETVAR
Trigger: CCTGGCTACAGTTTCAGGCCAGGAGCTTGTTGGCAC...GCAAAATGTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp ATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACATTTTGCCACAGAGGTCAGGCATaGCCATGTGTTGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: IFVKHTGNKSWMICHTFCHRGQA*PCVVAN
Trigger: GTTGGCCACAACACATGGCCATGCCTGACCTCTGTG...GCAAAATGTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp CCCTCCTGGTACTTAACCTTAAGCTCATGGCAGACAGCTGAGGAAGTACTCGCAACGGGAAACAAATCATaGATGATCTGCCACACATTT +
Preference number: 4 (lower is better)
Translates to: PSWYLTLSSWQTAEEVLATGNKS*MICHTF
Trigger: AAATGTGTGGCAGATCATCCATGATTTGTTTCCCGT...TGCGAGTACTTCCTCAGCTGTCTGCCATGAGCTTAAGGTTAAGTACCAGGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp AGTGCTCGCAGCCTCACAGATCGAACGACTTCCTACAACCTGTCACTTCTGTTTTCATATCCTCCCTCCTaGTACTTAACCTTAAGCTCA +
Preference number: 4 (lower is better)
Translates to: SARSLTDRTTSYNLSLLFSYPPS*YLTLSS
Trigger: TGAGCTTAAGGTTAAGTACCAGGAGGGAGGATATGA...AAACAGAAGTGACAGGTTGTAGGAAGTCGTTCGATCTGTGAGGCTGCGAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CAA 72 bp TTTAGGGTTATGTGTTTTTCTCCAAACCCAACAAGTTaGCCTCATGGCCAGGGCAAAGTGTGTGGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: FRVMCFSPNPTS*PHGQGKVCGAH
Trigger: ATGGGCTCCACACACTTTGCCCTGGCCATGAGGCAAACTTGTTGGGTTTGGAGAAAAACACATAACCCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp TTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACAACCACCTCCATCTATaGTGCATACTGATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: FQDIRKAHGKQIMDDLPHNHLHL*CILMRR
Trigger: CCGCCTCATCAGTATGCATCATAGATGGAGGTGGTT...GTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp ATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACATTTTGCGGATGGCCTACCTGGTaGGAAAGCTTGTTTCCACAC +
Preference number: 4 (lower is better)
Translates to: IFVKHTGNKSWMICHTFCGWPTW*ESLFPH
Trigger: GTGTGGAAACAAGCTTTCTCACCAGGTAGGCCATCC...GCAAAATGTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp ATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACATTTTGCGTGGCCAACAGAAAGTaGGCAGGGGCTGTATTTGTG +
Preference number: 4 (lower is better)
Translates to: IFVKHTGNKSWMICHTFCVANRK*AGAVFV
Trigger: CACAAATACAGCCCCTGCTCACTTTCTGTTGGCCAC...GCAAAATGTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp GATATCCTGGGTTGCGGGCTGGAAGAAGTATTAACAGTTGATGAAGCAGCTTGGACCACTGTCTTTTTGTaGGGCATGGTTGTGTTATGT +
Preference number: 4 (lower is better)
Translates to: DILGCGLEEVLTVDEAAWTTVFL*GMVVLC
Trigger: ACATAACACAACCATGCCTCACAAAAAGACAGTGGT...CCAAGCTGCTTCATCAACTGTTAATACTTCTTCCAGCCCGCAACCCAGGATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp CATCAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTGTATGGTATCCTGACTaGAGAAAACCACGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: HQIAKESGVVDFCHLNTLVWYPD*RKPRGV
Trigger: AACCCCACGTGGTTTTCTTCAGTCAGGATACCATAC...AAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp CATCAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTCTCAAACATTACTCTTaGAGGATCCAGCTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: HQIAKESGVVDFCHLNTLLKHYS*RIQLLP
Trigger: GGGCAGAAGCTGGATCCTGCAAGAGTAATGTTTGAG...AAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp AAAAATTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCGAAACTTACTGGGGTTaGAGTCCTGGAACAGGCCCC +
Preference number: 4 (lower is better)
Translates to: KNFRIFVKHTGNKSWMICETYWG*SPGTGP
Trigger: GGGGCCTGTTCCAGGACTTCAACCCCAGTAAGTTTC...GCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp CAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTCCTGCAGCAAAAGCTGACTaGTACATCACAGGAGAAATA +
Preference number: 4 (lower is better)
Translates to: QIAKESGVVDFCHLNTLPAAKAD*YITGEI
Trigger: TATTTCTCCTGTGATGTATCAGTCAGCTTTTGCTGC...AGGAAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp AAAAATTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCCCAAGGTAAGCTGCTaGTTCAACCAGGGACCCAGA +
Preference number: 4 (lower is better)
Translates to: KNFRIFVKHTGNKSWMICPKVSC*FNQGPR
Trigger: TCTGGGTCCCTGGTTGAAGCAGCAGCTTACCTTGGG...GCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp AAAAATTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCAGAGGGAGAGACACCTaGAGATATCCTGGGTTGCGG +
Preference number: 4 (lower is better)
Translates to: KNFRIFVKHTGNKSWMICRGRDT*RYPGLR
Trigger: CCGCAACCCAGGATATCTGCAGGTGTCTCTCCCTCT...GCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp CCTAGGGAAGGGATAAACCACTGTCTTTTTGTGAGGCATGGTTGTGTTATGTCATCTCCTCGCATGTTCTaGAAGCTACAGAATGAACAC +
Preference number: 4 (lower is better)
Translates to: PREGINHCLFVRHGCVMSSPRMF*KLQNEH
Trigger: GTGTTCATTCTGTAGCTTCCAGAACATGCGAGGAGA...TGACATAACACAACCATGCCTCACAAAAAGACAGTGGTTTATCCCTTCCCTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp AAAAATTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCACAGGACACTTTGCATaGGCAGGGCTGTTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: KNFRIFVKHTGNKSWMICTGHFA*AGLFAL
Trigger: GAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGT...GCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CAA 72 bp CACGGGAAACAAATCATGGATGATCTGCCACACATTTaGCGACTCCTTGAGAACCATTTTGTAATACTGAGG +
Preference number: 4 (lower is better)
Translates to: HGKQIMDDLPHI*RLLENHFVILR
Trigger: CCTCAGTATTACAAAATGGTTCTCAAGGAGTCGCAAAATGTGTGGCAGATCATCCATGATTTGTTTCCCGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp AAAAATTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCATACGGGACATGTTGTaGAGCAGACGTGATCAGACC +
Preference number: 4 (lower is better)
Translates to: KNFRIFVKHTGNKSWMICIRDML*SRRDQT
Trigger: GGTCTGATCACGTCTGCTCCACAACATGTCCCGTAT...GCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp TTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACGATAGCCAAGGAAAGTaGTGTAGTGGACTTTTGTCA +
Preference number: 4 (lower is better)
Translates to: FQDIRKAHGKQIMDDLPHDSQGK*CSGLLS
Trigger: TGACAAAAGTCCACTACACCACTTTCCTTGGCTATC...GTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp AAAAATTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCAAAACCACGTGGGGTTaGGAAAGGAAGGACCTTGAG +
Preference number: 4 (lower is better)
Translates to: KNFRIFVKHTGNKSWMICKTTWG*ERKDLE
Trigger: CTCAAGGTCCTTCCTTTCCCAACCCCACGTGGTTTT...GCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp ATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACATTTTGCGAATCTGACACATGCTaGATGCTGGATAATCAGTGT +
Preference number: 4 (lower is better)
Translates to: IFVKHTGNKSWMICHTFCESDTC*MLDNQC
Trigger: ACACTGATTATCCAGCATTCAGCATGTGTCAGATTC...GCAAAATGTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp ATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACATTTTGCATCTGCCACACATTTTaGGACTCCTTGAGAACCATT +
Preference number: 4 (lower is better)
Translates to: IFVKHTGNKSWMICHTFCICHTF*DSLRTI
Trigger: AATGGTTCTCAAGGAGTCGCAAAATGTGTGGCAGAT...GCAAAATGTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR GCA 90 bp TTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACATCGTTTTACATTTTTaGAGATCCTTAAAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: FQDIRKAHGKQIMDDLPHIVLHF*RSLKPG
Trigger: GCCAGGCTTTAAGGATCTGCAAAAATGTAAAACGAT...GTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR TCA 90 bp ATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACATTTTGCCATTTTGCGACTCCTTaGGAACCATTTTGTAATACT +
Preference number: 4 (lower is better)
Translates to: IFVKHTGNKSWMICHTFCHFATP*EPFCNT
Trigger: AGTATTACAAAATGGTTCTCAAGGAGTCGCAAAATG...GCAAAATGTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CCA 90 bp AAAAATTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCACACATGCTGAATGCTaGATAATCAGTGTTTCATGG +
Preference number: 4 (lower is better)
Translates to: KNFRIFVKHTGNKSWMICTHAEC*IISVSW
Trigger: CCATGAAACACTGATTATCCAGCATTCAGCATGTGT...GCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
3UTR CAA 72 bp TCCTTTTTGTTTCGACCTCCTTTCGAAAGTATTTATTaGTTCTCAAACATTACTCTTGCAGGATCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SFLFRPPFESIY*FSNITLAGSSF
Trigger: GAAGCTGGATCCTGCAAGAGTAATGTTTGAGAACAAATAAATACTTTCGAAAGGAGGTCGAAACAAAAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS CCA 90 bp GAGCGGCGAAGCGGAGAGGCCGGAACACGTGCACGCGCGGTCACGTaGCCCGGCCGGAAGCGCGCTGGGGTGTGGCGCGCGCGGGCACGG +
Preference number: 5 (lower is better)
Translates to: ERRSGEAGTRARAVT*PGRKRAGVWRARAR
Trigger: CCGTGCCCGCGCGCGCCACACCCCAGCGCGCTTCCGGCCGGGCCACGTGACCGCGCGTGCACGTGTTCCGGCCTCTCCGCTTCGCCGCTC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS CCA 90 bp TGGGGTGTGGCGCGCGCGGGCACGGGCGGCGCGGCGGTTACAAACTaGGCGCTGCCTCGGTCCCGCCGCCGCCCGCGTTCACTCCGTACC +
Preference number: 5 (lower is better)
Translates to: WGVARAGTGGAAVTN*ALPRSRRRPRSLRT
Trigger: GGTACGGAGTGAACGCGGGCGGCGGCGGGACCGAGGCAGCGCCCAGTTTGTAACCGCCGCGCCGCCCGTGCCCGCGCGCGCCACACCCCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS GCA 90 bp TGGCGCGCGCGGGCACGGGCGGCGCGGCGGTTACAAACTGGGCGCTaGCTCGGTCCCGCCGCCGCCCGCGTTCACTCCGTACCCATCAAG +
Preference number: 5 (lower is better)
Translates to: WRARARAARRLQTGR*LGPAAARVHSVPIK
Trigger: CTTGATGGGTACGGAGTGAACGCGGGCGGCGGCGGGACCGAGGCAGCGCCCAGTTTGTAACCGCCGCGCCGCCCGTGCCCGCGCGCGCCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS GCA 90 bp ACCAGGAGGAGGTTCGGAGCGGCGAAGCGGAGAGGCCGGAACACGTaGACGCGCGGTCACGTGGCCCGGCCGGAAGCGCGCTGGGGTGTG +
Preference number: 5 (lower is better)
Translates to: TRRRFGAAKRRGRNT*TRGHVARPEARWGV
Trigger: CACACCCCAGCGCGCTTCCGGCCGGGCCACGTGACCGCGCGTGCACGTGTTCCGGCCTCTCCGCTTCGCCGCTCCGAACCTCCTCCTGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS CCA 90 bp GAAGGGGCCTGGCGCGCTGCTGACTCCCCAAGCGGCCCGCGACCTTaGGCGGACGCTTCCAGGCGACTCCGGGAACATGGAGGCGGGAGT +
Preference number: 5 (lower is better)
Translates to: EGAWRAADSPSGPRP*ADASRRLREHGGGS
Trigger: ACTCCCGCCTCCATGTTCCCGGAGTCGCCTGGAAGCGTCCGCCCAAGGTCGCGGGCCGCTTGGGGAGTCAGCAGCGCGCCAGGCCCCTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS TCA 90 bp AGACGCAGGCAGCCACGGACACGGGGGACACGAAGAAGAGAGGCATaGAGACCAGCAGCCAGAAGTGGGTGCCCCTCTCCACCCTGTCGC +
Preference number: 5 (lower is better)
Translates to: RRRQPRTRGTRRREA*RPAARSGCPSPPCR
Trigger: GCGACAGGGTGGAGAGGGGCACCCACTTCTGGCTGCTGGTCTTCATGCCTCTCTTCTTCGTGTCCCCCGTGTCCGTGGCTGCCTGCGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp GCTCACACTTCTCACCGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCGACCCTCAGGGGTCCTaGGACCACACTGCCGAGGGC +
Preference number: 5 (lower is better)
Translates to: AHTSHRTGHFAWAGLFALDPQGS*DHTAEG
Trigger: GCCCTCGGCAGTGTGGTCCAAGGACCCCTGAGGGTC...GAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp CACGGAGTGACAGCCCCCTGTGTGGACTGTGCTTGTTCCTTGGCCATGCACTGCGACTGTGCTTGTTCCTaGGCCATGCACTGCCTCACC +
Preference number: 5 (lower is better)
Translates to: HGVTAPCVDCACSLAMHCDCACS*AMHCLT
Trigger: GGTGAGGCAGTGCATGGCCAAGGAACAAGCACAGTC...GCAGTGCATGGCCAAGGAACAAGCACAGTCCACACAGGGGGCTGTCACTCCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp GATATCCTGGGTTGCGGGCTGGAAGAAGTATTAACAGTTGATGAAGCAGCTTGGAAGCGGCCCGCGACCTaGGGCGGACGCTTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: DILGCGLEEVLTVDEAAWKRPAT*GGRFQA
Trigger: CGCCTGGAAGCGTCCGCCCAAGGTCGCGGGCCGCTT...CCAAGCTGCTTCATCAACTGTTAATACTTCTTCCAGCCCGCAACCCAGGATATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp TGCTGCTCAGGGCTGCCGGCTGGTGTAAACTGCCAGTGTGAGAGAGACAGAGCGGGGCTGTATTTGTGCTaGCAAGGTAGGGCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: CCSGLPAGVNCQCERDRAGLYLC*QGRAWP
Trigger: AGGCCAAGCCCTACCTTGCAAGCACAAATACAGCCC...CGCTCTGTCTCTCTCACACTGGCAGTTTACACCAGCCGGCAGCCCTGAGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp CACGGAGTGACAGCCCCCTGTGTGGACTGTGCTTGTTCCTTGGCCATGCACTGCCCAAACCCAACAAGTTaGCCTCATGGCCAGGGCAAA +
Preference number: 5 (lower is better)
Translates to: HGVTAPCVDCACSLAMHCPNPTS*PHGQGK
Trigger: TTTGCCCTGGCCATGAGGCAAACTTGTTGGGTTTGG...GCAGTGCATGGCCAAGGAACAAGCACAGTCCACACAGGGGGCTGTCACTCCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp CACGGAGTGACAGCCCCCTGTGTGGACTGTGCTTGTTCCTTGGCCATGCACTGCAGGCATGGCCATGTGTaGTGGCCAACAGAAAGTGAG +
Preference number: 5 (lower is better)
Translates to: HGVTAPCVDCACSLAMHCRHGHV*WPTESE
Trigger: CTCACTTTCTGTTGGCCACAACACATGGCCATGCCT...GCAGTGCATGGCCAAGGAACAAGCACAGTCCACACAGGGGGCTGTCACTCCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp CACGGAGTGACAGCCCCCTGTGTGGACTGTGCTTGTTCCTTGGCCATGCACTGCAGAATACGGGACATGTaGTGGAGCAGACGTGATCAG +
Preference number: 5 (lower is better)
Translates to: HGVTAPCVDCACSLAMHCRIRDM*WSRRDQ
Trigger: CTGATCACGTCTGCTCCACAACATGTCCCGTATTCT...GCAGTGCATGGCCAAGGAACAAGCACAGTCCACACAGGGGGCTGTCACTCCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp GGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGCAAATGAGCAGGGGCTGTATTaGTGCTTGCAAGGTAGGGCT +
Preference number: 5 (lower is better)
Translates to: GVMLSVVVAVASAASPANEQGLY*CLQGRA
Trigger: AGCCCTACCTTGCAAGCACAAATACAGCCCCTGCTC...ATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp TGCTGCTCAGGGCTGCCGGCTGGTGTAAACTGCCAGTGTGAGAGAGACAGAGCGGATCTGCCACACATTTaGCGACTCCTTGAGAACCAT +
Preference number: 5 (lower is better)
Translates to: CCSGLPAGVNCQCERDRADLPHI*RLLENH
Trigger: ATGGTTCTCAAGGAGTCGCAAAATGTGTGGCAGATC...CGCTCTGTCTCTCTCACACTGGCAGTTTACACCAGCCGGCAGCCCTGAGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp GGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGCAAATCCTTTCCAAAGCGCCTaGCATAGCCCTCCGGAGAAA +
Preference number: 5 (lower is better)
Translates to: GVMLSVVVAVASAASPANPFQSA*HSPPEK
Trigger: TTTCTCCGGAGGGCTATGCAAGGCGCTTTGGAAAGG...ATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp CCCTCCTGGTACTTAACCTTAAGCTCATGGCAGACAGCTGAGGAAGTACTCGCAGGGAAAGGAAGGACCTaGAGGACCCTCAGGGGTCCT +
Preference number: 5 (lower is better)
Translates to: PSWYLTLSSWQTAEEVLAGKGRT*RTLRGP
Trigger: AGGACCCCTGAGGGTCCTCAAGGTCCTTCCTTTCCC...TGCGAGTACTTCCTCAGCTGTCTGCCATGAGCTTAAGGTTAAGTACCAGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS TCA 90 bp GACATGAGGATCCACAGGGGCACAAACACCACCAGCCACGGCCAGTaGATAATCCTGTCCAGCTTTAGGGCGATGAAGATGAACTGCAGG +
Preference number: 5 (lower is better)
Translates to: DMRIHRGTNTTSHGQ*IILSSFRAMKMNCR
Trigger: CCTGCAGTTCATCTTCATCGCCCTAAAGCTGGACAGGATTATTCACTGGCCGTGGCTGGTGGTGTTTGTGCCCCTGTGGATCCTCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp GCTCACACTTCTCACCGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCAGAAACTTACTGGGGTaGAAGTCCTGGAACAGGCCC +
Preference number: 5 (lower is better)
Translates to: AHTSHRTGHFAWAGLFALRNLLG*KSWNRP
Trigger: GGGCCTGTTCCAGGACTTCAACCCCAGTAAGTTTCT...GAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp TTGTGGGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGATCCTTCCCTGCATTTaGCAAAAGCTGCACTGGGCT +
Preference number: 5 (lower is better)
Translates to: LWVSCCQWWWLWQVLHLQILPCI*QKLHWA
Trigger: AGCCCAGTGCAGCTTTTGCAAAATGCAGGGAAGGAT...CTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACCCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp TTGTGGGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGCCCTCCGGAGAAACTTaGGATTCCAGCACTTTCCTA +
Preference number: 5 (lower is better)
Translates to: LWVSCCQWWWLWQVLHLQPSGET*DSSTFL
Trigger: TAGGAAAGTGCTGGAATCCAAAGTTTCTCCGGAGGG...CTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACCCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp CCCTCCTGGTACTTAACCTTAAGCTCATGGCAGACAGCTGAGGAAGTACTCGCACTGGGCTCTTTCCCTTaGTGGGTGCAGCTCACACTT +
Preference number: 5 (lower is better)
Translates to: PSWYLTLSSWQTAEEVLALGSFP*WVQLTL
Trigger: AAGTGTGAGCTGCACCCACAAAGGGAAAGAGCCCAG...TGCGAGTACTTCCTCAGCTGTCTGCCATGAGCTTAAGGTTAAGTACCAGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp TGCTGCTCAGGGCTGCCGGCTGGTGTAAACTGCCAGTGTGAGAGAGACAGAGCGTGGACAAACCACTTGTaGCTTATTTCCACACAGTTA +
Preference number: 5 (lower is better)
Translates to: CCSGLPAGVNCQCERDRAWTNHL*LISTQL
Trigger: TAACTGTGTGGAAATAAGCAACAAGTGGTTTGTCCA...CGCTCTGTCTCTCTCACACTGGCAGTTTACACCAGCCGGCAGCCCTGAGCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp GCTCACACTTCTCACCGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCTCTCAAACATTACTCTaGCAGGATCCAGCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: AHTSHRTGHFAWAGLFALSQTLL*QDPASA
Trigger: GGCAGAAGCTGGATCCTGCAAGAGTAATGTTTGAGA...GAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp AGTGCTCGCAGCCTCACAGATCGAACGACTTCCTACAACCTGTCACTTCTGTTTCTGTGTGGACTGTGCTaGTTCCTTGGCCATGCACTG +
Preference number: 5 (lower is better)
Translates to: SARSLTDRTTSYNLSLLFLCGLC*FLGHAL
Trigger: CAGTGCATGGCCAAGGAACAAGCACAGTCCACACAG...AAACAGAAGTGACAGGTTGTAGGAAGTCGTTCGATCTGTGAGGCTGCGAGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp GGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGCAAATTGGTGTAGTGGACTTTaGTCATCTGAACACCCTTCC +
Preference number: 5 (lower is better)
Translates to: GVMLSVVVAVASAASPANWCSGL*SSEHPS
Trigger: GGAAGGGTGTTCAGATGACAAAAGTCCACTACACCA...ATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp GAAGTGCTCGCAGCCTCACAGATCGAACGACTTCCTACAACCTGTCACTTCTGTTCCGCCTTCGGTCTGTaGCAGTATGGTATCCTGACT +
Preference number: 5 (lower is better)
Translates to: EVLAASQIERLPTTCHFCSAFGL*QYGILT
Trigger: AGTCAGGATACCATACTGCAACAGACCGAAGGCGGA...ACAGAAGTGACAGGTTGTAGGAAGTCGTTCGATCTGTGAGGCTGCGAGCACTTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp TGCTGCTCAGGGCTGCCGGCTGGTGTAAACTGCCAGTGTGAGAGAGACAGAGCGCATCGTTTTACATTTTaGCAGATCCTTAAAGCCTGG +
Preference number: 5 (lower is better)
Translates to: CCSGLPAGVNCQCERDRAHRFTF*QILKAW
Trigger: CCAGGCTTTAAGGATCTGCAAAAATGTAAAACGATG...CGCTCTGTCTCTCTCACACTGGCAGTTTACACCAGCCGGCAGCCCTGAGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp GGTGTCATGCTGTCAGTGGTGGTGGCTGTGGCAAGTGCTGCATCTCCAGCAAATCACCTACACTCCTTTTaGTTTCGACCTCCTTTCGAA +
Preference number: 5 (lower is better)
Translates to: GVMLSVVVAVASAASPANHLHSF*FRPPFE
Trigger: TTCGAAAGGAGGTCGAAACAAAAAGGAGTGTAGGTG...ATTTGCTGGAGATGCAGCACTTGCCACAGCCACCACCACTGACAGCATGACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp GATATCCTGGGTTGCGGGCTGGAAGAAGTATTAACAGTTGATGAAGCAGCTTGGCTCAGGTTTGGGAGTTaGCACCAGGTGCCAACAAGC +
Preference number: 5 (lower is better)
Translates to: DILGCGLEEVLTVDEAAWLRFGS*HQVPTS
Trigger: GCTTGTTGGCACCTGGTGCAAACTCCCAAACCTGAG...CCAAGCTGCTTCATCAACTGTTAATACTTCTTCCAGCCCGCAACCCAGGATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp TTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACGGGGACCCCTCAGGTTaGGGAGTTTGCACCAGGTGC +
Preference number: 5 (lower is better)
Translates to: FQDIRKAHGKQIMDDLPHGDPSG*GVCTRC
Trigger: GCACCTGGTGCAAACTCCCAAACCTGAGGGGTCCCC...GTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp CAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTCCTCTGGAGGCTCCCTTTTaGTGGGTGTCATGCTGTCAG +
Preference number: 5 (lower is better)
Translates to: QIAKESGVVDFCHLNTLPLEAPF*WVSCCQ
Trigger: CTGACAGCATGACACCCACAAAAAGGGAGCCTCCAG...AGGAAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp CAGATAGCCAAGGAAAGTGGTGTAGTGGACTTTTGTCATCTGAACACCCTTCCTATGAACTGCAGGATGTaGACCGAGCACAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: QIAKESGVVDFCHLNTLPMNCRM*TEHRIS
Trigger: GGAGATCCTGTGCTCGGTCAACATCCTGCAGTTCAT...AGGAAGGGTGTTCAGATGACAAAAGTCCACTACACCACTTTCCTTGGCTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp GCTCACACTTCTCACCGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCGTGTGTGGAGCCCATTaGAGATCATTTTTAGTAAGT +
Preference number: 5 (lower is better)
Translates to: AHTSHRTGHFAWAGLFALVCGAH*RSFLVS
Trigger: ACTTACTAAAAATGATCTCAAATGGGCTCCACACAC...GAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp ATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACATTTTGCCATGGGCAGGGCTGTTaGCTCTCCACTGCATCCCCA +
Preference number: 5 (lower is better)
Translates to: IFVKHTGNKSWMICHTFCHGQGC*LSTASP
Trigger: TGGGGATGCAGTGGAGAGCAAACAGCCCTGCCCATG...GCAAAATGTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp CTCACACTTCTCACCGTACAGGACACTTTGCATGGGCAGGGCTGTTTGCTCTCCATTTCTGATGCTGTTTaGCAGCAAAAGCTGACTGAT +
Preference number: 5 (lower is better)
Translates to: LTLLTVQDTLHGQGCLLSISDAV*QQKLTD
Trigger: ATCAGTCAGCTTTTGCTGCAAAACAGCATCAGAAAT...GGAGAGCAAACAGCCCTGCCCATGCAAAGTGTCCTGTACGGTGAGAAGTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp TTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCCACACCGGATCCCTGTGAACTaGCTGGGCTTCATCCCATCT +
Preference number: 5 (lower is better)
Translates to: FQDIRKAHGKQIMDDLPHRIPVN*LGFIPS
Trigger: AGATGGGATGAAGCCCAGCAAGTTCACAGGGATCCG...GTGTGGCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS-3UTR CAA 90 bp AAAAATTTCAGGATATTCGTAAAGCACACGGGAAACAAATCATGGATGATCTGCTGCCTGGCACCATGCTaGGCTCGGGGTAGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: KNFRIFVKHTGNKSWMICCLAPC*ARGRSS
Trigger: TGAAGACCTACCCCGAGCCAAGCATGGTGCCAGGCA...GCAGATCATCCATGATTTGTTTCCCGTGTGCTTTACGAATATCCTGAAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS GCA 72 bp GTTCATGGCGGAGGCCGCCGCTTGCCTGCCCGGGCCTaGTCCCTCGCGACGCTCGGCGCTCGCGTCTCCGCG +
Preference number: 6 (lower is better)
Translates to: VHGGGRRLPARA*SLATLGARVSA
Trigger: CGCGGAGACGCGAGCGCCGAGCGTCGCGAGGGAGCAGGCCCGGGCAGGCAAGCGGCGGCCTCCGCCATGAAC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS GCA 72 bp AGGTTCGGAGCGGCGAAGCGGAGAGGCCGGAACACGTaGACGCGCGGTCACGTGGCCCGGCCGGAAGCGCGC +
Preference number: 6 (lower is better)
Translates to: RFGAAKRRGRNT*TRGHVARPEAR
Trigger: GCGCGCTTCCGGCCGGGCCACGTGACCGCGCGTGCACGTGTTCCGGCCTCTCCGCTTCGCCGCTCCGAACCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS GCA 72 bp CCCGGGCCCCGCCCAAGCCGGCTCCGCGTGGACGAATaGCGGGACGACCAGGAGGAGGTTCGGAGCGGCGAA +
Preference number: 6 (lower is better)
Translates to: PGPRPSRLRVDE*RDDQEEVRSGE
Trigger: TTCGCCGCTCCGAACCTCCTCCTGGTCGTCCCGGCATTCGTCCACGCGGAGCCGGCTTGGGCGGGGCCCGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS CCA 72 bp TGGCGCGCTGCTGACTCCCCAAGCGGCCCGCGACCTTaGGCGGACGCTTCCAGGCGACTCCGGGAACATGGA +
Preference number: 6 (lower is better)
Translates to: WRAADSPSGPRP*ADASRRLREHG
Trigger: TCCATGTTCCCGGAGTCGCCTGGAAGCGTCCGCCCAAGGTCGCGGGCCGCTTGGGGAGTCAGCAGCGCGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS TCA 72 bp ATATGGGGGCAAAGACGGCCCAGTAGCTCCATTGGATaGTGCCGTCCAGGCGGAGGGGCAGCAGCACCGAGA +
Preference number: 6 (lower is better)
Translates to: IWGQRRPSSSIG*CRPGGGAAAPR
Trigger: TCTCGGTGCTGCTGCCCCTCCGCCTGGACGGCATCATCCAATGGAGCTACTGGGCCGTCTTTGCCCCCATAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS TCA 72 bp CAGCCACGGACACGGGGGACACGAAGAAGAGAGGCATaGAGACCAGCAGCCAGAAGTGGGTGCCCCTCTCCA +
Preference number: 6 (lower is better)
Translates to: QPRTRGTRRREA*RPAARSGCPSP
Trigger: TGGAGAGGGGCACCCACTTCTGGCTGCTGGTCTTCATGCCTCTCTTCTTCGTGTCCCCCGTGTCCGTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS TCA 72 bp ATCCACAGGGGCACAAACACCACCAGCCACGGCCAGTaGATAATCCTGTCCAGCTTTAGGGCGATGAAGATG +
Preference number: 6 (lower is better)
Translates to: IHRGTNTTSHGQ*IILSSFRAMKM
Trigger: CATCTTCATCGCCCTAAAGCTGGACAGGATTATTCACTGGCCGTGGCTGGTGGTGTTTGTGCCCCTGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS CAA 72 bp TCCAGCTTTAGGGCGATGAAGATGAACTGCAGGATGTaGACCGAGCACAGGATCTCCAGCTCCAGCGACCTA +
Preference number: 6 (lower is better)
Translates to: SSFRAMKMNCRM*TEHRISSSSDL
Trigger: TAGGTCGCTGGAGCTGGAGATCCTGTGCTCGGTCAACATCCTGCAGTTCATCTTCATCGCCCTAAAGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3
CDS CAA 90 bp ATAATCCTGTCCAGCTTTAGGGCGATGAAGATGAACTGCAGGATGTaGACCGAGCACAGGATCTCCAGCTCCAGCGACCTATCGTGTCGA +
Preference number: 6 (lower is better)
Translates to: IILSSFRAMKMNCRM*TEHRISSSSDLSCR
Trigger: TCGACACGATAGGTCGCTGGAGCTGGAGATCCTGTGCTCGGTCAACATCCTGCAGTTCATCTTCATCGCCCTAAAGCTGGACAGGATTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426077.3