RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM184B (Homo sapiens)

Ensembl gene IDs: ENSG00000198792

Ensembl transcript IDs: ENST00000361684.8, ENST00000361906.8, ENST00000403210.2, ENST00000411679.2, ENST00000436674.5, ENST00000457534.5, ENST00000466117.1, ENST00000474416.1, ENST00000488844.1, ENST00000633056.1, ENST00000633438.1

Found 672 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCGTTGTCGCGGGCGCCACTGAGGCTGTGGGAGCGGGAGAGGCCGTaGGCGCCACCACGCCAGGTGGGCCCAGGCTCCAGGGTGGACTGC +
Preference number: 1 (lower is better)
Translates to: SLSRAPLRLWERERP*APPRQVGPGSRVDC
Trigger: GCAGTCCACCCTGGAGCCTGGGCCCACCTGGCGTGGTGGCGCCCACGGCCTCTCCCGCTCCCACAGCCTCAGTGGCGCCCGCGACAACGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR GCA 90 bp AAGCAGATGGCGGGGCAGGGCCAGGGCTGGTCCTCAGCCTGTGTCTaGACCCACCCTCCCGGGCAGCTTGGGCCCAACTGCTCCGCCCCC +
Preference number: 1 (lower is better)
Translates to: KQMAGQGQGWSSACV*THPPGQLGPNCSAP
Trigger: GGGGGCGGAGCAGTTGGGCCCAAGCTGCCCGGGAGGGTGGGTGCAGACACAGGCTGAGGACCAGCCCTGGCCCTGCCCCGCCATCTGCTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR CCA 90 bp CTGAGCAGGAGAGTCTTCTCGTTGTCGCGGGCGCCACTGAGGCTGTaGGAGCGGGAGAGGCCGTGGGCGCCACCACGCCAGGTGGGCCCA +
Preference number: 1 (lower is better)
Translates to: LSRRVFSLSRAPLRL*ERERPWAPPRQVGP
Trigger: TGGGCCCACCTGGCGTGGTGGCGCCCACGGCCTCTCCCGCTCCCACAGCCTCAGTGGCGCCCGCGACAACGAGAAGACTCTCCTGCTCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR GCA 90 bp AGAAGGCTGCAGCCGCTGGTCCACACACAAGCATTGGGGCCTGGGTaGGGCTGGTCCCAGCATGCCCCCAGCACAGGACGGGCAGCAGGG +
Preference number: 1 (lower is better)
Translates to: RRLQPLVHTQALGPG*GWSQHAPSTGRAAG
Trigger: CCCTGCTGCCCGTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTGTGTGGACCAGCGGCTGCAGCCTTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR CCA 90 bp GAGGAGGGGCTAGAAGGCTGCAGCCGCTGGTCCACACACAAGCATTaGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGAC +
Preference number: 1 (lower is better)
Translates to: EEGLEGCSRWSTHKH*GLGAAGPSMPPAQD
Trigger: GTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTGTGTGGACCAGCGGCTGCAGCCTTCTAGCCCCTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR CCA 90 bp GGGAGAAGGGAAGCCACGGTGGAGAGACAGCTTGGTGAAAGCAGATaGCGGGGCAGGGCCAGGGCTGGTCCTCAGCCTGTGTCTGCACCC +
Preference number: 1 (lower is better)
Translates to: GRREATVERQLGESR*RGRARAGPQPVSAP
Trigger: GGGTGCAGACACAGGCTGAGGACCAGCCCTGGCCCTGCCCCGCCATCTGCTTTCACCAAGCTGTCTCTCCACCGTGGCTTCCCTTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR TCA 90 bp AAGCGGTGCCCAGGGGCCCTGAATGCCCTTCCTGGGTGGGGCCTGTaGCTCCTGGTGTCTGGCTCTGATCCTTGCAGCATGCCACAGAGG +
Preference number: 1 (lower is better)
Translates to: KRCPGALNALPGWGL*LLVSGSDPCSMPQR
Trigger: CCTCTGTGGCATGCTGCAAGGATCAGAGCCAGACACCAGGAGTCACAGGCCCCACCCAGGAAGGGCATTCAGGGCCCCTGGGCACCGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR TCA 90 bp CAGGAAGCAAGGGCTCTGCCCAAAGCTATCGAGGAAGGACCCAAGTaGGCCGGCAGTGCGGGCTGTGGGCTGTCCTTGGTAGGCCAGGGG +
Preference number: 1 (lower is better)
Translates to: QEARALPKAIEEGPK*AGSAGCGLSLVGQG
Trigger: CCCCTGGCCTACCAAGGACAGCCCACAGCCCGCACTGCCGGCTCACTTGGGTCCTTCCTCGATAGCTTTGGGCAGAGCCCTTGCTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR TCA 90 bp TGCCCTCGCCCGGGCAGTGCAGGCTGGGCCATGTATAAATATTCCTaGAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAG +
Preference number: 1 (lower is better)
Translates to: CPRPGSAGWAMYKYS*RPMGEPGCPPFLWK
Trigger: CTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGCCCGGGCGAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
3UTR CCA 90 bp CCCTCCACGCAAACAGCAACGCTGGGCAGGCGAAAACCAAGGGAGTaGGAATCAGCAGCACTTTGGCCTGGAGGGAGAAGGGAAGCCACG +
Preference number: 1 (lower is better)
Translates to: PSTQTATLGRRKPRE*ESAALWPGGRREAT
Trigger: CGTGGCTTCCCTTCTCCCTCCAGGCCAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGCTGTTTGCGTGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR CCA 90 bp CCACTGGTGACGTCAAAGTCCCCATCCCGGTACTTGCCGAAGGCCTaGAGGACCACAGTGCTGACCGCCATGAGTGGCTTCACCACACAG +
Preference number: 1 (lower is better)
Translates to: PLVTSKSPSRYLPKA*RTTVLTAMSGFTTQ
Trigger: CTGTGTGGTGAAGCCACTCATGGCGGTCAGCACTGTGGTCCTCCAGGCCTTCGGCAAGTACCGGGATGGGGACTTTGACGTCACCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR CCA 90 bp ACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTaGCCTGGAGGGAGAAGGGAAGCCACGGTGGAGAGACAGCTTGGT +
Preference number: 1 (lower is better)
Translates to: TLGRRKPREWESAAL*PGGRREATVERQLG
Trigger: ACCAAGCTGTCTCTCCACCGTGGCTTCCCTTCTCCCTCCAGGCCAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR CCA 90 bp GGAAGGAGGCCAGGAAGACGGCTGGGCCCCAACTCTCCTCACAGGTaGCAGGGAGGGAACCTGTTCATTCCAGGAAGGACCAAAAGAAAG +
Preference number: 1 (lower is better)
Translates to: GRRPGRRLGPNSPHR*QGGNLFIPGRTKRK
Trigger: CTTTCTTTTGGTCCTTCCTGGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGTCTTCCTGGCCTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp GGATGGAGCGGTCGGGCACATGTTCCCGTCCCCACGACCCCACGGACCGCTGATCGGCTGGTCCCAGCATaGCCCCAGCACAGGACGGGC +
Preference number: 2 (lower is better)
Translates to: GWSGRAHVPVPTTPRTADRLVPA*PQHRTG
Trigger: GCCCGTCCTGTGCTGGGGGCATGCTGGGACCAGCCG...ATCAGCGGTCCGTGGGGTCGTGGGGACGGGAACATGTGCCCGACCGCTCCATCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp CCCACTCCTGCCCGGGGTGAGGTGAATCTAGCACTGGACAAAGGTGGACAGGGGCGGCTGGTCCCAGCATaGCCCCAGCACAGGACGGGC +
Preference number: 2 (lower is better)
Translates to: PTPARGEVNLALDKGGQGRLVPA*PQHRTG
Trigger: GCCCGTCCTGTGCTGGGGGCATGCTGGGACCAGCCG...CCCCTGTCCACCTTTGTCCAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp ACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCCCCTCCCGGTCTCCCTaGCGGACTGCCTTCCCCCAG +
Preference number: 2 (lower is better)
Translates to: TAGPQLSSQVAGREPVHSPSRSP*RTAFPQ
Trigger: CTGGGGGAAGGCAGTCCGGCAGGGAGACCGGGAGGG...GGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp GGATGGAGCGGTCGGGCACATGTTCCCGTCCCCACGACCCCACGGACCGCTGATCCTGTCCAAGGGCTCTaGGCCCAGCACTGCAGGATC +
Preference number: 2 (lower is better)
Translates to: GWSGRAHVPVPTTPRTADPVQGL*AQHCRI
Trigger: GATCCTGCAGTGCTGGGCCCAGAGCCCTTGGACAGG...ATCAGCGGTCCGTGGGGTCGTGGGGACGGGAACATGTGCCCGACCGCTCCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR TCA 90 bp TGCAGGATCCTGCGAGTGCCAGCAGCTGAACTAAGAGCCCCAGGGAGCGTGTGGAGGTGGGGCACAGCCTaGCCGTGGCTATGGCGCCAG +
Preference number: 2 (lower is better)
Translates to: CRILRVPAAELRAPGSVWRWGTA*PWLWRQ
Trigger: CTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCT...CCACACGCTCCCTGGGGCTCTTAGTTCAGCTGCTGGCACTCGCAGGATCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp GACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCGCTCCCAGTGTCCTCTaGCCTCGCCCGGGCAGTGCA +
Preference number: 2 (lower is better)
Translates to: DGWAPTLLTGGREGTCSFAPSVL*PRPGSA
Trigger: TGCACTGCCCGGGCGAGGGCAGAGGACACTGGGAGC...GAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp GCGGCCTTGTGCGTCCAGCCTCTTGTCAGCATAGACCTTGTAGGTGAAGGCGTGAGCCGGCAGCCACGGTaGCCTCGCCCACCGACACGC +
Preference number: 2 (lower is better)
Translates to: AALCVQPLVSIDLVGEGVSRQPR*PRPPTR
Trigger: GCGTGTCGGTGGGCGAGGGCACCGTGGCTGCCGGCT...CACGCCTTCACCTACAAGGTCTATGCTGACAAGAGGCTGGACGCACAAGGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR-3UTR CCA 90 bp CCCACTCCTGCCCGGGGTGAGGTGAATCTAGCACTGGACAAAGGTGGACAGGGGGCCCATGGGCGAGCCTaGCTGTCCCCCGTTCCTCTG +
Preference number: 2 (lower is better)
Translates to: PTPARGEVNLALDKGGQGAHGRA*LSPVPL
Trigger: CAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGC...CCCCTGTCCACCTTTGTCCAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp AAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTGAGGCCCATGGGCGAGCCTaGCTGTCCCCCGTTCCTCTG +
Preference number: 2 (lower is better)
Translates to: KAHGRAWLSPVPLEVTCEAHGRA*LSPVPL
Trigger: CAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGC...CTCACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
3UTR-3UTR CCA 90 bp TGCAGGATCCTGCGAGTGCCAGCAGCTGAACTAAGAGCCCCAGGGAGCGTGTGGGCCCATGGGCGAGCCTaGCTGTCCCCCGTTCCTCTG +
Preference number: 2 (lower is better)
Translates to: CRILRVPAAELRAPGSVWAHGRA*LSPVPL
Trigger: CAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGC...CCACACGCTCCCTGGGGCTCTTAGTTCAGCTGCTGGCACTCGCAGGATCCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp GGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCAGGCCCCAGGGAGCGTGTaGGACAGATGGGGAGCCAGG +
Preference number: 2 (lower is better)
Translates to: GWAPTLLTGGREGTCSFQAPGSV*DRWGAR
Trigger: CCTGGCTCCCCATCTGTCCCACACGCTCCCTGGGGC...CTGGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp GGATGGAGCGGTCGGGCACATGTTCCCGTCCCCACGACCCCACGGACCGCTGATAGGAGGAGGAGGGGATaGAGCGGTCGGGCACATGTT +
Preference number: 2 (lower is better)
Translates to: GWSGRAHVPVPTTPRTADRRRRG*SGRAHV
Trigger: AACATGTGCCCGACCGCTCCATCCCCTCCTCCTCCT...ATCAGCGGTCCGTGGGGTCGTGGGGACGGGAACATGTGCCCGACCGCTCCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR TCA 90 bp ACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCTTGCCGACCTCAGCCTaGGAGTCTCGCGGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: TAGPQLSSQVAGREPVHSLPTSA*ESRGEE
Trigger: CTCCTCCCCGCGAGACTCTCAGGCTGAGGTCGGCAA...GGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR TCA 90 bp CAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCAGGTCCTGACCACTCCTaGGGCCTGTCCAAGGGCTCT +
Preference number: 2 (lower is better)
Translates to: QAGRAQVRQGIARCVGEPGPDHS*GLSKGS
Trigger: AGAGCCCTTGGACAGGCCTCAGGAGTGGTCAGGACC...TGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp ACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCGGGGGAGCCACGGCTTaGCGACCTCAGCCTGAGAGT +
Preference number: 2 (lower is better)
Translates to: TAGPQLSSQVAGREPVHSGGATA*RPQPES
Trigger: ACTCTCAGGCTGAGGTCGGCAAGCCGTGGCTCCCCC...GGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp CAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCAGGGCCCAGAAGCCCCTaGTTCAACAGAAGCGGTGCC +
Preference number: 2 (lower is better)
Translates to: QAGRAQVRQGIARCVGEPGPRSP*FNRSGA
Trigger: GGCACCGCTTCTGTTGAAGCAGGGGCTTCTGGGCCC...TGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp GACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCTGTGGCCACGACAGGTaGGGATACCCAGGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: DGWAPTLLTGGREGTCSFCGHDR*GYPGAQ
Trigger: CTGGGCCCCTGGGTATCCCCACCTGTCGTGGCCACA...GAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp TGCAGGATCCTGCGAGTGCCAGCAGCTGAACTAAGAGCCCCAGGGAGCGTGTGGTGTGGCCACGACAGGTaGGGATACCCAGGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: CRILRVPAAELRAPGSVWCGHDR*GYPGAQ
Trigger: CTGGGCCCCTGGGTATCCCCACCTGTCGTGGCCACA...CCACACGCTCCCTGGGGCTCTTAGTTCAGCTGCTGGCACTCGCAGGATCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp TGCAGGATCCTGCGAGTGCCAGCAGCTGAACTAAGAGCCCCAGGGAGCGTGTGGCCTGGGAAGGAGGGCTaGGAGCCCCTGAGCCCTGAA +
Preference number: 2 (lower is better)
Translates to: CRILRVPAAELRAPGSVWPGKEG*EPLSPE
Trigger: TTCAGGGCTCAGGGGCTCCCAGCCCTCCTTCCCAGG...CCACACGCTCCCTGGGGCTCTTAGTTCAGCTGCTGGCACTCGCAGGATCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp CAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCAACACCAGGCCCTGTGTaGATAGGGGCCCCGAGAGGA +
Preference number: 2 (lower is better)
Translates to: QAGRAQVRQGIARCVGEPTPGPV*IGAPRG
Trigger: TCCTCTCGGGGCCCCTATCCACACAGGGCCTGGTGT...TGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp CCACAGAGCGCCCACATCCCCACTCCTGCCCGGGGTGAGGTGAATCTAGCACTGGGCCAGGAAGACGGCTaGGCCCCAACTCTCCTCACA +
Preference number: 2 (lower is better)
Translates to: PQSAHIPTPARGEVNLALGQEDG*APTLLT
Trigger: TGTGAGGAGAGTTGGGGCCCAGCCGTCTTCCTGGCC...CAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGGGATGTGGGCGCTCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR TCA 90 bp TTATGCATCCTAAGGAGGAGGAGGGGATGGAGCGGTCGGGCACATGTTCCCGTCAGGTGGGGCACAGCCTaGCCGTGGCTATGGCGCCAG +
Preference number: 2 (lower is better)
Translates to: LCILRRRRGWSGRAHVPVRWGTA*PWLWRQ
Trigger: CTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCT...GACGGGAACATGTGCCCGACCGCTCCATCCCCTCCTCCTCCTTAGGATGCATAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR TCA 90 bp GCGGCCTTGTGCGTCCAGCCTCTTGTCAGCATAGACCTTGTAGGTGAAGGCGTGAGGTGGGGCACAGCCTaGCCGTGGCTATGGCGCCAG +
Preference number: 2 (lower is better)
Translates to: AALCVQPLVSIDLVGEGVRWGTA*PWLWRQ
Trigger: CTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCT...CACGCCTTCACCTACAAGGTCTATGCTGACAAGAGGCTGGACGCACAAGGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR-3UTR TCA 90 bp CAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCACACTCCTGCCCGGGGTaGGGTGAATCTAGCACTGGA +
Preference number: 2 (lower is better)
Translates to: QAGRAQVRQGIARCVGEPHSCPG*GESSTG
Trigger: TCCAGTGCTAGATTCACCTCACCCCGGGCAGGAGTG...TGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR TCA 90 bp AAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTGAGGCGAGTGCCAGCAGCTaGACTAAGAGCCCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: KAHGRAWLSPVPLEVTCEASASS*TKSPRE
Trigger: CTCCCTGGGGCTCTTAGTTCAGCTGCTGGCACTCGC...CTCACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp TTATGCATCCTAAGGAGGAGGAGGGGATGGAGCGGTCGGGCACATGTTCCCGTCGCTCCCAGTGTCCTCTaGCCTCGCCCGGGCAGTGCA +
Preference number: 2 (lower is better)
Translates to: LCILRRRRGWSGRAHVPVAPSVL*PRPGSA
Trigger: TGCACTGCCCGGGCGAGGGCAGAGGACACTGGGAGC...GACGGGAACATGTGCCCGACCGCTCCATCCCCTCCTCCTCCTTAGGATGCATAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp AAGCAAGGGCTCTGCCCAAAGCTATCGAGGAAGGACCCAAGTGAGCCGGCAGTGCCCAGGGGCCCTGAATaGCCTTCCTGGGTGGGGCCT +
Preference number: 2 (lower is better)
Translates to: KQGLCPKLSRKDPSEPAVPRGPE*PSWVGP
Trigger: AGGCCCCACCCAGGAAGGGCATTCAGGGCCCCTGGG...CACTGCCGGCTCACTTGGGTCCTTCCTCGATAGCTTTGGGCAGAGCCCTTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp GGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCAGGTCTCCCTGCCGGACTaGCTTCCCCCAGAAGCTGGT +
Preference number: 2 (lower is better)
Translates to: GWAPTLLTGGREGTCSFQVSLPD*LPPEAG
Trigger: ACCAGCTTCTGGGGGAAGGCAGTCCGGCAGGGAGAC...CTGGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp GACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCGTCTCCCTGCCGGACTaGCTTCCCCCAGAAGCTGGT +
Preference number: 2 (lower is better)
Translates to: DGWAPTLLTGGREGTCSFVSLPD*LPPEAG
Trigger: ACCAGCTTCTGGGGGAAGGCAGTCCGGCAGGGAGAC...GAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp GGATGGAGCGGTCGGGCACATGTTCCCGTCCCCACGACCCCACGGACCGCTGATGCTTCTCCAGGTGACTaGAGCCCAAACCCAGGGATA +
Preference number: 2 (lower is better)
Translates to: GWSGRAHVPVPTTPRTADASPGD*SPNPGI
Trigger: TATCCCTGGGTTTGGGCTGCAGTCACCTGGAGAAGC...ATCAGCGGTCCGTGGGGTCGTGGGGACGGGAACATGTGCCCGACCGCTCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp CGGGCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCGCCCATGGGCGAGCCTaGCTGTCCCCCGTTCCTCTG +
Preference number: 2 (lower is better)
Translates to: RAVQAGPCINIPEGPWASAHGRA*LSPVPL
Trigger: CAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGC...GCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
3UTR-3UTR CCA 90 bp TGCAGGATCCTGCGAGTGCCAGCAGCTGAACTAAGAGCCCCAGGGAGCGTGTGGGTATTGCACGGTGTGTaGGGGAGCCACGGCTTGCCG +
Preference number: 2 (lower is better)
Translates to: CRILRVPAAELRAPGSVWVLHGV*GSHGLP
Trigger: CGGCAAGCCGTGGCTCCCCCACACACCGTGCAATAC...CCACACGCTCCCTGGGGCTCTTAGTTCAGCTGCTGGCACTCGCAGGATCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp ACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCACACCAGGCCCTGTGTaGATAGGGGCCCCGAGAGGA +
Preference number: 2 (lower is better)
Translates to: TAGPQLSSQVAGREPVHSTPGPV*IGAPRG
Trigger: TCCTCTCGGGGCCCCTATCCACACAGGGCCTGGTGT...GGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR TCA 90 bp ACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCCACTCCTGCCCGGGGTaGGGTGAATCTAGCACTGGA +
Preference number: 2 (lower is better)
Translates to: TAGPQLSSQVAGREPVHSHSCPG*GESSTG
Trigger: TCCAGTGCTAGATTCACCTCACCCCGGGCAGGAGTG...GGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR TCA 90 bp TGCAGGATCCTGCGAGTGCCAGCAGCTGAACTAAGAGCCCCAGGGAGCGTGTGGCATAGACCTTGTAGGTaGAGGCGTGCCGCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: CRILRVPAAELRAPGSVWHRPCR*RRAAGP
Trigger: TGGCCCTGCGGCACGCCTTCACCTACAAGGTCTATG...CCACACGCTCCCTGGGGCTCTTAGTTCAGCTGCTGGCACTCGCAGGATCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR-3UTR GCA 90 bp ACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCGGTCAGACAGGGTATTaGACGGTGTGTGGGGGAGCC +
Preference number: 2 (lower is better)
Translates to: TAGPQLSSQVAGREPVHSGQTGY*TVCGGA
Trigger: GGCTCCCCCACACACCGTGCAATACCCTGTCTGACC...GGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp GGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCAGTCCACACACAAGCATTaGGGCCTGGGTGCGGCTGGT +
Preference number: 2 (lower is better)
Translates to: GWAPTLLTGGREGTCSFQSTHKH*GLGAAG
Trigger: ACCAGCCGCACCCAGGCCCCAATGCTTGTGTGTGGA...CTGGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp CAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCAGGGGCCTGTGACTCCTaGTGTCTGGCTCTGATCCTT +
Preference number: 2 (lower is better)
Translates to: QAGRAQVRQGIARCVGEPGACDS*CLALIL
Trigger: AAGGATCAGAGCCAGACACCAGGAGTCACAGGCCCC...TGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp CGGGCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCGGCAGTGCGGGCTGTaGGCTGTCCTTGGTAGGCCA +
Preference number: 2 (lower is better)
Translates to: RAVQAGPCINIPEGPWASRQCGL*AVLGRP
Trigger: TGGCCTACCAAGGACAGCCCACAGCCCGCACTGCCG...GCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp GCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGGCCTGGGCCAGGGGCCAGATaGGGTAGAACACCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: ATLGRRKPREWESAALWPGPGAR*GRTPGP
Trigger: AGGGCCTGGTGTTCTACCCCATCTGGCCCCTGGCCC...AGGCCAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp CAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCACACACTTCTCCAGGATaGCCAGGAGCATGCCTTGCC +
Preference number: 2 (lower is better)
Translates to: QAGRAQVRQGIARCVGEPHTSPG*PGACLA
Trigger: GGCAAGGCATGCTCCTGGCCATCCTGGAGAAGTGTG...TGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR-3UTR CCA 90 bp CAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCAGGGCCGAGTGGATTTTaGGGATGGCCCCACACTTCT +
Preference number: 2 (lower is better)
Translates to: QAGRAQVRQGIARCVGEPGPSGF*GWPHTS
Trigger: AGAAGTGTGGGGCCATCCCCAAAATCCACTCGGCCC...TGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR-3UTR TCA 90 bp GCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGGCCTGGTCCTGACCACTCCTaGGGCCTGTCCAAGGGCTCT +
Preference number: 2 (lower is better)
Translates to: ATLGRRKPREWESAALWPGPDHS*GLSKGS
Trigger: AGAGCCCTTGGACAGGCCTCAGGAGTGGTCAGGACC...AGGCCAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR TCA 90 bp ACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCAGAAAGAATCCCCAGTaGACACCGGCAGGGTCCCTC +
Preference number: 2 (lower is better)
Translates to: TAGPQLSSQVAGREPVHSRKNPQ*TPAGSL
Trigger: GAGGGACCCTGCCGGTGTTCACTGGGGATTCTTTCT...GGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR TCA 90 bp GGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCAGAGAAAGAATCCCCAGTaGACACCGGCAGGGTCCCTC +
Preference number: 2 (lower is better)
Translates to: GWAPTLLTGGREGTCSFQRKNPQ*TPAGSL
Trigger: GAGGGACCCTGCCGGTGTTCACTGGGGATTCTTTCT...CTGGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp GCGGCCTTGTGCGTCCAGCCTCTTGTCAGCATAGACCTTGTAGGTGAAGGCGTGGAGGGGCTAGAAGGCTaGAGCCGCTGGTCCACACAC +
Preference number: 2 (lower is better)
Translates to: AALCVQPLVSIDLVGEGVEGLEG*SRWSTH
Trigger: GTGTGTGGACCAGCGGCTGCAGCCTTCTAGCCCCTC...CACGCCTTCACCTACAAGGTCTATGCTGACAAGAGGCTGGACGCACAAGGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR-3UTR GCA 90 bp CAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCATCTGGCTCTGATCCTTaGAGCATGCCACAGAGGCCT +
Preference number: 2 (lower is better)
Translates to: QAGRAQVRQGIARCVGEPSGSDP*SMPQRP
Trigger: AGGCCTCTGTGGCATGCTGCAAGGATCAGAGCCAGA...TGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp GGGTCCCTCTCCCTTACCCTACCAGCTTCTCCAGGTGACTGCAGCCCAAACCCACTTCAACAGAAGCGGTaGCCAGGGGCCCTGAATGCC +
Preference number: 2 (lower is better)
Translates to: GSLSLTLPASPGDCSPNPLQQKR*PGALNA
Trigger: GGCATTCAGGGCCCCTGGGCACCGCTTCTGTTGAAG...TGGGTTTGGGCTGCAGTCACCTGGAGAAGCTGGTAGGGTAAGGGAGAGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp GGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCAGAGCACTGCAGGATCCTaGGAGTGCCAGCAGCTGAAC +
Preference number: 2 (lower is better)
Translates to: GWAPTLLTGGREGTCSFQSTAGS*ECQQLN
Trigger: GTTCAGCTGCTGGCACTCGCAGGATCCTGCAGTGCT...CTGGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp CAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCAGCTTCTCCAGGTGACTaGAGCCCAAACCCAGGGATA +
Preference number: 2 (lower is better)
Translates to: QAGRAQVRQGIARCVGEPASPGD*SPNPGI
Trigger: TATCCCTGGGTTTGGGCTGCAGTCACCTGGAGAAGC...TGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp GACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCCGCAGGGCCAGGGCTaGAAAGAACATCTCCACACA +
Preference number: 2 (lower is better)
Translates to: DGWAPTLLTGGREGTCSFPQGQG*KEHLHT
Trigger: TGTGTGGAGATGTTCTTTGCAGCCCTGGCCCTGCGG...GAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR-3UTR GCA 90 bp GGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCAGCAGCACTTCCGCCACTaGAGCCCGCACCTAGAATTC +
Preference number: 2 (lower is better)
Translates to: GWAPTLLTGGREGTCSFQQHFRH*SPHLEF
Trigger: GAATTCTAGGTGCGGGCTGCAGTGGCGGAAGTGCTG...CTGGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR-3UTR CCA 90 bp CACTTCCGCCACTGCAGCCCGCACCTAGAATTCATCATCAGAGCTGAGCAGGAGCGGCAGTGCGGGCTGTaGGCTGTCCTTGGTAGGCCA +
Preference number: 2 (lower is better)
Translates to: HFRHCSPHLEFIIRAEQERQCGL*AVLGRP
Trigger: TGGCCTACCAAGGACAGCCCACAGCCCGCACTGCCG...CTCCTGCTCAGCTCTGATGATGAATTCTAGGTGCGGGCTGCAGTGGCGGAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR CAA 90 bp AACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTaGGCCTGGAGGGAGAAGGGAAGCCACGGTGGAGAGACAGCTTGG +
Preference number: 2 (lower is better)
Translates to: NAGQAKTKGVGISST*AWREKGSHGGETAW
Trigger: CCAAGCTGTCTCTCCACCGTGGCTTCCCTTCTCCCTCCAGGCCAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR TCA 90 bp TTATGCATCCTAAGGAGGAGGAGGGGATGGAGCGGTCGGGCACATGTTCCCGTCCTCAGACCTTTCCCCTaGAACGGGAGGGAGAAGCCC +
Preference number: 2 (lower is better)
Translates to: LCILRRRRGWSGRAHVPVLRPFP*NGREKP
Trigger: GGGCTTCTCCCTCCCGTTTCAGGGGAAAGGTCTGAG...GACGGGAACATGTGCCCGACCGCTCCATCCCCTCCTCCTCCTTAGGATGCATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp AACAGCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGGGGGGAGCCACGGCTTaGCGACCTCAGCCTGAGAGT +
Preference number: 2 (lower is better)
Translates to: NSNAGQAKTKGVGISSTLGGATA*RPQPES
Trigger: ACTCTCAGGCTGAGGTCGGCAAGCCGTGGCTCCCCC...CAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGCTGTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp CGCCAGCACTTCCGCCACTGCAGCCCGCACCTAGAATTCATCATCAGAGCTGAGCTTCAACAGAAGCGGTaGCCAGGGGCCCTGAATGCC +
Preference number: 2 (lower is better)
Translates to: RQHFRHCSPHLEFIIRAELQQKR*PGALNA
Trigger: GGCATTCAGGGCCCCTGGGCACCGCTTCTGTTGAAG...CTCAGCTCTGATGATGAATTCTAGGTGCGGGCTGCAGTGGCGGAAGTGCTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR-3UTR GCA 90 bp CACTTCCGCCACTGCAGCCCGCACCTAGAATTCATCATCAGAGCTGAGCAGGAGGTCTCCCTGCCGGACTaGCTTCCCCCAGAAGCTGGT +
Preference number: 2 (lower is better)
Translates to: HFRHCSPHLEFIIRAEQEVSLPD*LPPEAG
Trigger: ACCAGCTTCTGGGGGAAGGCAGTCCGGCAGGGAGAC...CTCCTGCTCAGCTCTGATGATGAATTCTAGGTGCGGGCTGCAGTGGCGGAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR-3UTR CCA 90 bp CACTTCCGCCACTGCAGCCCGCACCTAGAATTCATCATCAGAGCTGAGCAGGAGACAAGCATTGGGGCCTaGGTGCGGCTGGTCCCAGCA +
Preference number: 2 (lower is better)
Translates to: HFRHCSPHLEFIIRAEQETSIGA*VRLVPA
Trigger: TGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGT...CTCCTGCTCAGCTCTGATGATGAATTCTAGGTGCGGGCTGCAGTGGCGGAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR-3UTR CCA 90 bp GCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGGCCTTCCACACACAAGCATTaGGGCCTGGGTGCGGCTGGT +
Preference number: 2 (lower is better)
Translates to: ATLGRRKPREWESAALWPSTHKH*GLGAAG
Trigger: ACCAGCCGCACCCAGGCCCCAATGCTTGTGTGTGGA...AGGCCAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp AAGCAAGGGCTCTGCCCAAAGCTATCGAGGAAGGACCCAAGTGAGCCGGCAGTGAGGCAGGCAGAGGTGTaGCCACGACAGGTGGGGATA +
Preference number: 2 (lower is better)
Translates to: KQGLCPKLSRKDPSEPAVRQAEV*PRQVGI
Trigger: TATCCCCACCTGTCGTGGCCACACCTCTGCCTGCCT...CACTGCCGGCTCACTTGGGTCCTTCCTCGATAGCTTTGGGCAGAGCCCTTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp ACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCCCTTCCCCCAGAAGCTaGTCTGAAACGTGGAGACTC +
Preference number: 2 (lower is better)
Translates to: TAGPQLSSQVAGREPVHSPSPRS*SETWRL
Trigger: GAGTCTCCACGTTTCAGACCAGCTTCTGGGGGAAGG...GGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp AAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTGAGCCTTCCCCCAGAAGCTaGTCTGAAACGTGGAGACTC +
Preference number: 2 (lower is better)
Translates to: KAHGRAWLSPVPLEVTCEPSPRS*SETWRL
Trigger: GAGTCTCCACGTTTCAGACCAGCTTCTGGGGGAAGG...CTCACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR TCA 90 bp AACAGCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGGGTCCTGACCACTCCTaGGGCCTGTCCAAGGGCTCT +
Preference number: 2 (lower is better)
Translates to: NSNAGQAKTKGVGISSTLGPDHS*GLSKGS
Trigger: AGAGCCCTTGGACAGGCCTCAGGAGTGGTCAGGACC...CAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp GGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCAGAGGAAGCAAGGGCTCTaGCCAAAGCTATCGAGGAAG +
Preference number: 2 (lower is better)
Translates to: GWAPTLLTGGREGTCSFQRKQGL*PKLSRK
Trigger: CTTCCTCGATAGCTTTGGGCAGAGCCCTTGCTTCCT...CTGGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp CAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCAGCCAGGAGCATGCCTTaGCAGAAGGAAAGAAAGATG +
Preference number: 2 (lower is better)
Translates to: QAGRAQVRQGIARCVGEPARSMP*QKERKM
Trigger: CATCTTTCTTTCCTTCTGGCAAGGCATGCTCCTGGC...TGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR-3UTR CCA 90 bp AAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTGAGCCGGGCAGTGCAGGCTaGGCCATGTATAAATATTCC +
Preference number: 2 (lower is better)
Translates to: KAHGRAWLSPVPLEVTCEPGSAG*AMYKYS
Trigger: GGAATATTTATACATGGCCCAGCCTGCACTGCCCGG...CTCACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
3UTR-3UTR CCA 90 bp CGCCAGCACTTCCGCCACTGCAGCCCGCACCTAGAATTCATCATCAGAGCTGAGGAAGGCTGCAGCCGCTaGTCCACACACAAGCATTGG +
Preference number: 2 (lower is better)
Translates to: RQHFRHCSPHLEFIIRAEEGCSR*STHKHW
Trigger: CCAATGCTTGTGTGTGGACCAGCGGCTGCAGCCTTC...CTCAGCTCTGATGATGAATTCTAGGTGCGGGCTGCAGTGGCGGAAGTGCTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR-3UTR CCA 90 bp AACAGCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGATGGAGGGGGAGAGCTaGCCTCTGGCACCCACATGC +
Preference number: 2 (lower is better)
Translates to: NSNAGQAKTKGVGISSTLMEGES*PLAPTC
Trigger: GCATGTGGGTGCCAGAGGCCAGCTCTCCCCCTCCAT...CAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR TCA 90 bp ACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCCCGTTCCTCTGGAAGTaGCATGTGAGTGTTTCTGGT +
Preference number: 2 (lower is better)
Translates to: TAGPQLSSQVAGREPVHSPFLWK*HVSVSG
Trigger: ACCAGAAACACTCACATGTCACTTCCAGAGGAACGG...GGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR TCA 90 bp TTATGCATCCTAAGGAGGAGGAGGGGATGGAGCGGTCGGGCACATGTTCCCGTCCGTAGATGGGCACGATaGAGAGGATGCGCACGATGT +
Preference number: 2 (lower is better)
Translates to: LCILRRRRGWSGRAHVPVRRWAR*RGCARC
Trigger: ACATCGTGCGCATCCTCTTCATCGTGCCCATCTACG...GACGGGAACATGTGCCCGACCGCTCCATCCCCTCCTCCTCCTTAGGATGCATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR-3UTR GCA 90 bp TCTCCAGGTGACTGCAGCCCAAACCCAGGGATAATCTGGGTTTTAAATGCCAGGGGGGGAGCCACGGCTTaGCGACCTCAGCCTGAGAGT +
Preference number: 2 (lower is better)
Translates to: SPGDCSPNPGIIWVLNARGGATA*RPQPES
Trigger: ACTCTCAGGCTGAGGTCGGCAAGCCGTGGCTCCCCC...CCTGGCATTTAAAACCCAGATTATCCCTGGGTTTGGGCTGCAGTCACCTGGAGA
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp AAGCAAGGGCTCTGCCCAAAGCTATCGAGGAAGGACCCAAGTGAGCCGGCAGTGTCTGGCTCTGATCCTTaGAGCATGCCACAGAGGCCT +
Preference number: 2 (lower is better)
Translates to: KQGLCPKLSRKDPSEPAVSGSDP*SMPQRP
Trigger: AGGCCTCTGTGGCATGCTGCAAGGATCAGAGCCAGA...CACTGCCGGCTCACTTGGGTCCTTCCTCGATAGCTTTGGGCAGAGCCCTTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp GCGGCCTTGTGCGTCCAGCCTCTTGTCAGCATAGACCTTGTAGGTGAAGGCGTGGCTGACCGCCATGAGTaGCTTCACCACACAGAACTG +
Preference number: 2 (lower is better)
Translates to: AALCVQPLVSIDLVGEGVADRHE*LHHTEL
Trigger: CAGTTCTGTGTGGTGAAGCCACTCATGGCGGTCAGC...CACGCCTTCACCTACAAGGTCTATGCTGACAAGAGGCTGGACGCACAAGGCCGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR-3UTR TCA 90 bp TGCAGGATCCTGCGAGTGCCAGCAGCTGAACTAAGAGCCCCAGGGAGCGTGTGGGGGCGCTTTCATATGTaGCTAAGGCACAGAAGAGAT +
Preference number: 2 (lower is better)
Translates to: CRILRVPAAELRAPGSVWGRFHM*LRHRRD
Trigger: ATCTCTTCTGTGCCTTAGTCACATATGAAAGCGCCC...CCACACGCTCCCTGGGGCTCTTAGTTCAGCTGCTGGCACTCGCAGGATCCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp GGATGGAGCGGTCGGGCACATGTTCCCGTCCCCACGACCCCACGGACCGCTGATCTTCCTCACTTTATTTaGTCACTTCTGTCACGCATT +
Preference number: 2 (lower is better)
Translates to: GWSGRAHVPVPTTPRTADLPHFI*SLLSRI
Trigger: AATGCGTGACAGAAGTGAGCAAATAAAGTGAGGAAG...ATCAGCGGTCCGTGGGGTCGTGGGGACGGGAACATGTGCCCGACCGCTCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp TCTCCAGGTGACTGCAGCCCAAACCCAGGGATAATCTGGGTTTTAAATGCCAGGATTCCTGAAGGCCCATaGGCGAGCCTGGCTGTCCCC +
Preference number: 2 (lower is better)
Translates to: SPGDCSPNPGIIWVLNARIPEGP*ASLAVP
Trigger: GGGGACAGCCAGGCTCGCCCATGGGCCTTCAGGAAT...CCTGGCATTTAAAACCCAGATTATCCCTGGGTTTGGGCTGCAGTCACCTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp CGGGCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCCGGGCAGTGCAGGCTaGGCCATGTATAAATATTCC +
Preference number: 2 (lower is better)
Translates to: RAVQAGPCINIPEGPWASPGSAG*AMYKYS
Trigger: GGAATATTTATACATGGCCCAGCCTGCACTGCCCGG...GCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
3UTR-3UTR CCA 90 bp AACAGCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGGAAGGCTGCAGCCGCTaGTCCACACACAAGCATTGG +
Preference number: 2 (lower is better)
Translates to: NSNAGQAKTKGVGISSTLEGCSR*STHKHW
Trigger: CCAATGCTTGTGTGTGGACCAGCGGCTGCAGCCTTC...CAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp CAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCATGCCATACATACAGCTaGACTCAATGGGTTTTCCTC +
Preference number: 2 (lower is better)
Translates to: QAGRAQVRQGIARCVGEPCHTYS*TQWVFL
Trigger: GAGGAAAACCCATTGAGTCCAGCTGTATGTATGGCA...TGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR-3UTR GCA 90 bp AAACCCAGGGATAATCTGGGTTTTAAATGCCAGGACACTTTGCCTGTAGGGACAGCATTGGGGCCTGGGTaGGGCTGGTCCCAGCATGCC +
Preference number: 2 (lower is better)
Translates to: KPRDNLGFKCQDTLPVGTALGPG*GWSQHA
Trigger: GGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGC...TGTCCCTACAGGCAAAGTGTCCTGGCATTTAAAACCCAGATTATCCCTGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp AAACCCAGGGATAATCTGGGTTTTAAATGCCAGGACACTTTGCCTGTAGGGACACCCAGGGGCCCTGAATaGCCTTCCTGGGTGGGGCCT +
Preference number: 2 (lower is better)
Translates to: KPRDNLGFKCQDTLPVGTPRGPE*PSWVGP
Trigger: AGGCCCCACCCAGGAAGGGCATTCAGGGCCCCTGGG...TGTCCCTACAGGCAAAGTGTCCTGGCATTTAAAACCCAGATTATCCCTGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp AGGCCAGGAAGACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACAATCTGGGTTTTAAATaGCAGGACACTTTGCCTGTA +
Preference number: 2 (lower is better)
Translates to: RPGRRLGPNSPHRWQGGNNLGFK*QDTLPV
Trigger: TACAGGCAAAGTGTCCTGGCATTTAAAACCCAGATT...GTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGTCTTCCTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp ATGCAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGATAAATGCCAAGAGCTaGTCTACCACAGTCCTCAGT +
Preference number: 2 (lower is better)
Translates to: MQAGRAQVRQGIARCVGEINAKS*STTVLS
Trigger: ACTGAGGACTGTGGTAGAGCAGCTCTTGGCATTTAT...CTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR-3UTR TCA 90 bp CGGGCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCATGTATAAATATTCCTaGAGGCCCATGGGCGAGCCT +
Preference number: 2 (lower is better)
Translates to: RAVQAGPCINIPEGPWASMYKYS*RPMGEP
Trigger: AGGCTCGCCCATGGGCCTTCAGGAATATTTATACAT...GCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
3UTR-3UTR TCA 90 bp AAACCCAGGGATAATCTGGGTTTTAAATGCCAGGACACTTTGCCTGTAGGGACATTGCCGACCTCAGCCTaGGAGTCTCGCGGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: KPRDNLGFKCQDTLPVGTLPTSA*ESRGEE
Trigger: CTCCTCCCCGCGAGACTCTCAGGCTGAGGTCGGCAA...TGTCCCTACAGGCAAAGTGTCCTGGCATTTAAAACCCAGATTATCCCTGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp AAACCCAGGGATAATCTGGGTTTTAAATGCCAGGACACTTTGCCTGTAGGGACATGGACAGGGGAGGGATaGAGGCGGGAAGAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: KPRDNLGFKCQDTLPVGTWTGEG*RREEPR
Trigger: CCTGGGCTCTTCCCGCCTGCATCCCTCCCCTGTCCA...TGTCCCTACAGGCAAAGTGTCCTGGCATTTAAAACCCAGATTATCCCTGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp ATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCATACAACAAGATACAAAACTGGGCCTGGGTGCGGCTaGTCCCAGCATGCCCCCAGC +
Preference number: 2 (lower is better)
Translates to: IEWLSGGTHGSHTTRYKTGPGCG*SQHAPS
Trigger: GCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCC...AGTTTTGTATCTTGTTGTATGACTGCCATGAGTTCCACCAGAAAGCCACTCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp GGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCAGACCTCAGAAATCCGATaGAATAAGTCTTTCCCCAGA +
Preference number: 2 (lower is better)
Translates to: GWAPTLLTGGREGTCSFQTSEIR*NKSFPR
Trigger: TCTGGGGAAAGACTTATTCCATCGGATTTCTGAGGT...CTGGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR-3UTR TCA 90 bp ATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCATACAACAAGATACAAAACTGGTGCCCAGGGGCCCTaGATGCCCTTCCTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: IEWLSGGTHGSHTTRYKTGAQGP*MPFLGG
Trigger: CCCACCCAGGAAGGGCATTCAGGGCCCCTGGGCACC...AGTTTTGTATCTTGTTGTATGACTGCCATGAGTTCCACCAGAAAGCCACTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR GCA 90 bp AAGCAAGGGCTCTGCCCAAAGCTATCGAGGAAGGACCCAAGTGAGCCGGCAGTGGTGCATGTAGATAAATaGCAAGAGCTGCTCTACCAC +
Preference number: 2 (lower is better)
Translates to: KQGLCPKLSRKDPSEPAVVHVDK*QELLYH
Trigger: GTGGTAGAGCAGCTCTTGGCATTTATCTACATGCAC...CACTGCCGGCTCACTTGGGTCCTTCCTCGATAGCTTTGGGCAGAGCCCTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR-3UTR CCA 90 bp AAATGTCACAGAGACCAAAATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCAATAAGCCCAGCCTGCTaGGGGTTCCGGAGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: KCHRDQNRVAFWWNSWQSISPAC*GFRRPQ
Trigger: CTGGGGCCTCCGGAACCCCCAGCAGGCTGGGCTTAT...TGACTGCCATGAGTTCCACCAGAAAGCCACTCTATTTTGGTCTCTGTGACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp GCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGGCCTAATAGAGTGGCTTTCTaGTGGAACTCATGGCAGTCA +
Preference number: 2 (lower is better)
Translates to: ATLGRRKPREWESAALWPNRVAF*WNSWQS
Trigger: TGACTGCCATGAGTTCCACCAGAAAGCCACTCTATT...AGGCCAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR TCA 90 bp CGCCAGCACTTCCGCCACTGCAGCCCGCACCTAGAATTCATCATCAGAGCTGAGTCAGGAAATTATAGATaGCCAAGGCCTCATAGCAGT +
Preference number: 2 (lower is better)
Translates to: RQHFRHCSPHLEFIIRAESGNYR*PRPHSS
Trigger: ACTGCTATGAGGCCTTGGTCATCTATAATTTCCTGA...CTCAGCTCTGATGATGAATTCTAGGTGCGGGCTGCAGTGGCGGAAGTGCTGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR-3UTR CCA 90 bp AAATGTCACAGAGACCAAAATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCAACAAGCATTGGGGCCTaGGTGCGGCTGGTCCCAGCA +
Preference number: 2 (lower is better)
Translates to: KCHRDQNRVAFWWNSWQSTSIGA*VRLVPA
Trigger: TGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGT...TGACTGCCATGAGTTCCACCAGAAAGCCACTCTATTTTGGTCTCTGTGACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp GCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGGCCTGAGACCAAAATAGAGTaGCTTTCTGGTGGAACTCAT +
Preference number: 2 (lower is better)
Translates to: ATLGRRKPREWESAALWPETKIE*LSGGTH
Trigger: ATGAGTTCCACCAGAAAGCCACTCTATTTTGGTCTC...AGGCCAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp AAACCCAGGGATAATCTGGGTTTTAAATGCCAGGACACTTTGCCTGTAGGGACAGGGGCCTGTGACTCCTaGTGTCTGGCTCTGATCCTT +
Preference number: 2 (lower is better)
Translates to: KPRDNLGFKCQDTLPVGTGACDS*CLALIL
Trigger: AAGGATCAGAGCCAGACACCAGGAGTCACAGGCCCC...TGTCCCTACAGGCAAAGTGTCCTGGCATTTAAAACCCAGATTATCCCTGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp AAATGTCACAGAGACCAAAATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCAAGGAGGAGGAGGGGATaGAGCGGTCGGGCACATGTT +
Preference number: 2 (lower is better)
Translates to: KCHRDQNRVAFWWNSWQSRRRRG*SGRAHV
Trigger: AACATGTGCCCGACCGCTCCATCCCCTCCTCCTCCT...TGACTGCCATGAGTTCCACCAGAAAGCCACTCTATTTTGGTCTCTGTGACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp GCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGGCCTTTCTGGTGGAACTCATaGCAGTCATACAACAAGATA +
Preference number: 2 (lower is better)
Translates to: ATLGRRKPREWESAALWPFWWNS*QSYNKI
Trigger: TATCTTGTTGTATGACTGCCATGAGTTCCACCAGAA...AGGCCAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR TCA 90 bp TCTCCAGGTGACTGCAGCCCAAACCCAGGGATAATCTGGGTTTTAAATGCCAGGGGGCGCTTTCATATGTaGCTAAGGCACAGAAGAGAT +
Preference number: 2 (lower is better)
Translates to: SPGDCSPNPGIIWVLNARGRFHM*LRHRRD
Trigger: ATCTCTTCTGTGCCTTAGTCACATATGAAAGCGCCC...CCTGGCATTTAAAACCCAGATTATCCCTGGGTTTGGGCTGCAGTCACCTGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp ATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCATACAACAAGATACAAAACTATGGAGGGGGAGAGCTaGCCTCTGGCACCCACATGC +
Preference number: 2 (lower is better)
Translates to: IEWLSGGTHGSHTTRYKTMEGES*PLAPTC
Trigger: GCATGTGGGTGCCAGAGGCCAGCTCTCCCCCTCCAT...AGTTTTGTATCTTGTTGTATGACTGCCATGAGTTCCACCAGAAAGCCACTCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CCA 90 bp AAATGTCACAGAGACCAAAATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCACGCAAACAGCAACGCTaGGCAGGCGAAAACCAAGGG +
Preference number: 2 (lower is better)
Translates to: KCHRDQNRVAFWWNSWQSRKQQR*AGENQG
Trigger: CCCTTGGTTTTCGCCTGCCCAGCGTTGCTGTTTGCG...TGACTGCCATGAGTTCCACCAGAAAGCCACTCTATTTTGGTCTCTGTGACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR TCA 90 bp CTGGACTCAATGGGTTTTCCTCTGATCTCCGACATGATGGAACTTTCTCCTCCTTCAGGAAATTATAGATaGCCAAGGCTGCGAAGAGAG +
Preference number: 2 (lower is better)
Translates to: LDSMGFPLISDMMELSPPSGNYR*PRLRRE
Trigger: CTCTCTTCGCAGCCTTGGTCATCTATAATTTCCTGA...AGGAGGAGAAAGTTCCATCATGTCGGAGATCAGAGGAAAACCCATTGAGTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457534.5
3UTR-3UTR GCA 90 bp TACATACAGCTGGACTCAATGGGTTTTCCTCTGATCTCCGACATGATGGAACTTATAGATGACCAAGGCTaGGAAGAGAGTGTCCAGGAG +
Preference number: 2 (lower is better)
Translates to: YIQLDSMGFPLISDMMELIDDQG*EESVQE
Trigger: CTCCTGGACACTCTCTTCGCAGCCTTGGTCATCTAT...AAGTTCCATCATGTCGGAGATCAGAGGAAAACCCATTGAGTCCAGCTGTATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457534.5
3UTR-3UTR TCA 90 bp AAATGTCACAGAGACCAAAATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCAGGGCGCTTTCATATGTaGCTAAGGCACAGAAGAGAT +
Preference number: 2 (lower is better)
Translates to: KCHRDQNRVAFWWNSWQSGRFHM*LRHRRD
Trigger: ATCTCTTCTGTGCCTTAGTCACATATGAAAGCGCCC...TGACTGCCATGAGTTCCACCAGAAAGCCACTCTATTTTGGTCTCTGTGACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR CCA 72 bp AGAGTCTTCTCGTTGTCGCGGGCGCCACTGAGGCTGTaGGAGCGGGAGAGGCCGTGGGCGCCACCACGCCAG +
Preference number: 3 (lower is better)
Translates to: RVFSLSRAPLRL*ERERPWAPPRQ
Trigger: CTGGCGTGGTGGCGCCCACGGCCTCTCCCGCTCCCACAGCCTCAGTGGCGCCCGCGACAACGAGAAGACTCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR GCA 72 bp CAGCCGCTGGTCCACACACAAGCATTGGGGCCTGGGTaGGGCTGGTCCCAGCATGCCCCCAGCACAGGACGG +
Preference number: 3 (lower is better)
Translates to: QPLVHTQALGPG*GWSQHAPSTGR
Trigger: CCGTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTGTGTGGACCAGCGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR CCA 72 bp GCTGCAGCCGCTGGTCCACACACAAGCATTGGGGCCTaGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGG +
Preference number: 3 (lower is better)
Translates to: AAAAGPHTSIGA*VRLVPACPQHR
Trigger: CCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTGTGTGGACCAGCGGCTGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR CCA 72 bp CTAGAAGGCTGCAGCCGCTGGTCCACACACAAGCATTaGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCA +
Preference number: 3 (lower is better)
Translates to: LEGCSRWSTHKH*GLGAAGPSMPP
Trigger: TGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTGTGTGGACCAGCGGCTGCAGCCTTCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CAA 90 bp GGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCAGGGGGGCACAGCGGCCTaGTGCGTCCAGCCTCTTGTC +
Preference number: 3 (lower is better)
Translates to: GWAPTLLTGGREGTCSFQGGTAA*CVQPLV
Trigger: GACAAGAGGCTGGACGCACAAGGCCGCTGTGCCCCC...CTGGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR GCA 72 bp GATGCAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTaGACGGTGTGTGGGGGAGCCACGGCTTGCCGACCT +
Preference number: 3 (lower is better)
Translates to: DAGGKSPGQTGY*TVCGGATACRP
Trigger: AGGTCGGCAAGCCGTGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTGCATC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR GCA 72 bp CCTGCTTCAACAGAAGCGGTGCCCAGGGGCCCTGAATaGCCTTCCTGGGTGGGGCCTGTGACTCCTGGTGTC +
Preference number: 3 (lower is better)
Translates to: PASTEAVPRGPE*PSWVGPVTPGV
Trigger: GACACCAGGAGTCACAGGCCCCACCCAGGAAGGGCATTCAGGGCCCCTGGGCACCGCTTCTGTTGAAGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR TCA 72 bp CCAGGGGCCCTGAATGCCCTTCCTGGGTGGGGCCTGTaGCTCCTGGTGTCTGGCTCTGATCCTTGCAGCATG +
Preference number: 3 (lower is better)
Translates to: PGALNALPGWGL*LLVSGSDPCSM
Trigger: CATGCTGCAAGGATCAGAGCCAGACACCAGGAGTCACAGGCCCCACCCAGGAAGGGCATTCAGGGCCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR TCA 72 bp GGCCCAGCACTGCAGGATCCTGCGAGTGCCAGCAGCTaGACTAAGAGCCCCAGGGAGCGTGTGGGACAGATG +
Preference number: 3 (lower is better)
Translates to: GPALQDPASASS*TKSPRERVGQM
Trigger: CATCTGTCCCACACGCTCCCTGGGGCTCTTAGTTCAGCTGCTGGCACTCGCAGGATCCTGCAGTGCTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CAA 90 bp ACTGGTGACGTCAAAGTCCCCATCCCGGTACTTGCCGAAGGCCTGGAGGACCACGTCCACACACAAGCATaGGGGCCTGGGTGCGGCTGG +
Preference number: 3 (lower is better)
Translates to: TGDVKVPIPVLAEGLEDHVHTQA*GPGCGW
Trigger: CCAGCCGCACCCAGGCCCCAATGCTTGTGTGTGGAC...GTGGTCCTCCAGGCCTTCGGCAAGTACCGGGATGGGGACTTTGACGTCACCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR-3UTR CAA 90 bp GGGTCCCTCTCCCTTACCCTACCAGCTTCTCCAGGTGACTGCAGCCCAAACCCATCCCCATCCCGGTACTaGCCGAAGGCCTGGAGGACC +
Preference number: 3 (lower is better)
Translates to: GSLSLTLPASPGDCSPNPSPSRY*PKAWRT
Trigger: GGTCCTCCAGGCCTTCGGCAAGTACCGGGATGGGGA...TGGGTTTGGGCTGCAGTCACCTGGAGAAGCTGGTAGGGTAAGGGAGAGGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR-3UTR CAA 90 bp GGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCAGAGGAGAGTCTTCTCGTaGTCGCGGGCGCCACTGAGG +
Preference number: 3 (lower is better)
Translates to: GWAPTLLTGGREGTCSFQRRVFS*SRAPLR
Trigger: CCTCAGTGGCGCCCGCGACAACGAGAAGACTCTCCT...CTGGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR-3UTR CAA 90 bp TTATGCATCCTAAGGAGGAGGAGGGGATGGAGCGGTCGGGCACATGTTCCCGTCGTCCACACACAAGCATaGGGGCCTGGGTGCGGCTGG +
Preference number: 3 (lower is better)
Translates to: LCILRRRRGWSGRAHVPVVHTQA*GPGCGW
Trigger: CCAGCCGCACCCAGGCCCCAATGCTTGTGTGTGGAC...GACGGGAACATGTGCCCGACCGCTCCATCCCCTCCTCCTCCTTAGGATGCATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR TCA 72 bp CCGGGCAGTGCAGGCTGGGCCATGTATAAATATTCCTaGAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTC +
Preference number: 3 (lower is better)
Translates to: PGSAGWAMYKYS*RPMGEPGCPPF
Trigger: GAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
3UTR TCA 72 bp ACCACAGAGCGCCCACATCCCCACTCCTGCCCGGGGTaGGGTGAATCTAGCACTGGACAAAGGTGGACAGGG +
Preference number: 3 (lower is better)
Translates to: TTERPHPHSCPG*GESSTGQRWTG
Trigger: CCCTGTCCACCTTTGTCCAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGGGATGTGGGCGCTCTGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR TCA 72 bp AGGGCTCTGCCCAAAGCTATCGAGGAAGGACCCAAGTaGGCCGGCAGTGCGGGCTGTGGGCTGTCCTTGGTA +
Preference number: 3 (lower is better)
Translates to: RALPKAIEEGPK*AGSAGCGLSLV
Trigger: TACCAAGGACAGCCCACAGCCCGCACTGCCGGCTCACTTGGGTCCTTCCTCGATAGCTTTGGGCAGAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR CCA 72 bp CCAGGAAGACGGCTGGGCCCCAACTCTCCTCACAGGTaGCAGGGAGGGAACCTGTTCATTCCAGGAAGGACC +
Preference number: 3 (lower is better)
Translates to: PGRRLGPNSPHR*QGGNLFIPGRT
Trigger: GGTCCTTCCTGGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGTCTTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CAA 90 bp CAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCAGGCCAGGAGCATGCCTaGCCAGAAGGAAAGAAAGAT +
Preference number: 3 (lower is better)
Translates to: QAGRAQVRQGIARCVGEPGQEHA*PEGKKD
Trigger: ATCTTTCTTTCCTTCTGGCAAGGCATGCTCCTGGCC...TGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR TCA 72 bp CCACTGCAGCCCGCACCTAGAATTCATCATCAGAGCTaGGCAGGAGAGTCTTCTCGTTGTCGCGGGCGCCAC +
Preference number: 3 (lower is better)
Translates to: PLQPAPRIHHQS*AGESSRCRGRH
Trigger: GTGGCGCCCGCGACAACGAGAAGACTCTCCTGCTCAGCTCTGATGATGAATTCTAGGTGCGGGCTGCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436674.5
3UTR CCA 72 bp CAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATaGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGT +
Preference number: 3 (lower is better)
Translates to: QAGPCINIPEGP*ASLAVPRSSGS
Trigger: ACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
3UTR CCA 72 bp AGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTaGCCTGGAGGGAGAAGGGAAGCCACGGTGGAGAGA +
Preference number: 3 (lower is better)
Translates to: RRKPREWESAAL*PGGRREATVER
Trigger: TCTCTCCACCGTGGCTTCCCTTCTCCCTCCAGGCCAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CAA 90 bp AAACCCAGGGATAATCTGGGTTTTAAATGCCAGGACACTTTGCCTGTAGGGACAGGCTGTGGGCTGTCCTaGGTAGGCCAGGGGGAAGGG +
Preference number: 3 (lower is better)
Translates to: KPRDNLGFKCQDTLPVGTGCGLS*VGQGEG
Trigger: CCCTTCCCCCTGGCCTACCAAGGACAGCCCACAGCC...TGTCCCTACAGGCAAAGTGTCCTGGCATTTAAAACCCAGATTATCCCTGGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR-3UTR CAA 90 bp AAATGTCACAGAGACCAAAATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCAGTCCACACACAAGCATaGGGGCCTGGGTGCGGCTGG +
Preference number: 3 (lower is better)
Translates to: KCHRDQNRVAFWWNSWQSVHTQA*GPGCGW
Trigger: CCAGCCGCACCCAGGCCCCAATGCTTGTGTGTGGAC...TGACTGCCATGAGTTCCACCAGAAAGCCACTCTATTTTGGTCTCTGTGACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR TCA 72 bp ATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTaGCATGTGAGTGTTTCTGGTCCAATAAATAAAGGC +
Preference number: 3 (lower is better)
Translates to: MGEPGCPPFLWK*HVSVSGPINKG
Trigger: GCCTTTATTTATTGGACCAGAAACACTCACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
3UTR-3UTR CAA 90 bp AAACCCAGGGATAATCTGGGTTTTAAATGCCAGGACACTTTGCCTGTAGGGACACGGTGGAGAGACAGCTaGGTGAAAGCAGATGGCGGG +
Preference number: 3 (lower is better)
Translates to: KPRDNLGFKCQDTLPVGTRWRDS*VKADGG
Trigger: CCCGCCATCTGCTTTCACCAAGCTGTCTCTCCACCG...TGTCCCTACAGGCAAAGTGTCCTGGCATTTAAAACCCAGATTATCCCTGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR GCA 72 bp TCCCTCTCCCTTACCCTACCAGCTTCTCCAGGTGACTaGAGCCCAAACCCAGGGATAATCTGGGTTTTAAAT +
Preference number: 3 (lower is better)
Translates to: SLSLTLPASPGD*SPNPGIIWVLN
Trigger: ATTTAAAACCCAGATTATCCCTGGGTTTGGGCTGCAGTCACCTGGAGAAGCTGGTAGGGTAAGGGAGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR CCA 72 bp AAATGTCACAGAGACCAAAATAGAGTGGCTTTCTGGTaGAACTCATGGCAGTCATACAACAAGATACAAAAC +
Preference number: 3 (lower is better)
Translates to: KCHRDQNRVAFW*NSWQSYNKIQN
Trigger: GTTTTGTATCTTGTTGTATGACTGCCATGAGTTCCACCAGAAAGCCACTCTATTTTGGTCTCTGTGACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp GAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCTGTCGCGGGCGCCACTaGGGCTGTGGGAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: EAGGGAQPDRGYGASTSACRGRH*GCGSGR
Trigger: TCTCCCGCTCCCACAGCCTCAGTGGCGCCCGCGACA...GGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp CACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACAGCCGGCAGCCACGGTaGCCTCGCCCACCGACACGC +
Preference number: 4 (lower is better)
Translates to: HKHWGLGAAGPSMPPAQDSRQPR*PRPPTR
Trigger: GCGTGTCGGTGGGCGAGGGCACCGTGGCTGCCGGCT...GTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp GAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCAGGCTGCTGCGGTCGTaGGCGACGCTGGATCCGGGG +
Preference number: 4 (lower is better)
Translates to: EAGGGAQPDRGYGASTSARLLRS*ATLDPG
Trigger: CCCCGGATCCAGCGTCGCCCACGACCGCAGCAGCCT...GGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGATGGAGCGGTCGGGCACATGTTCCCGTCCCCACGACCCCACGGACCGCTGATGAGCGGGAGAGGCCGTaGGCGCCACCACGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GWSGRAHVPVPTTPRTADERERP*APPRQV
Trigger: CACCTGGCGTGGTGGCGCCCACGGCCTCTCCCGCTC...ATCAGCGGTCCGTGGGGTCGTGGGGACGGGAACATGTGCCCGACCGCTCCATCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCAGGGCCTGGGTGCGGCTaGTCCCAGCATGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GGGAQPDRGYGASTSATAGPGCG*SQHAPS
Trigger: GCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCC...TGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp ACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACGGGGCCTGGGTGCGGCTaGTCCCAGCATGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: TSIGAWVRLVPACPQHRTGPGCG*SQHAPS
Trigger: GCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCC...CGTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp CACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACGGGCCTGGGTGCGGCTaGTCCCAGCATGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: HKHWGLGAAGPSMPPAQDGPGCG*SQHAPS
Trigger: GCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCC...GTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp GGATGGAGCGGTCGGGCACATGTTCCCGTCCCCACGACCCCACGGACCGCTGATGGCGTCTGCGGACGATaGGCGGCAGCCGGACTCTGC +
Preference number: 4 (lower is better)
Translates to: GWSGRAHVPVPTTPRTADGVCGR*AAAGLC
Trigger: GCAGAGTCCGGCTGCCGCGCATCGTCCGCAGACGCC...ATCAGCGGTCCGTGGGGTCGTGGGGACGGGAACATGTGCCCGACCGCTCCATCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp GAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCGCTCCCAGTGTCCTCTaGCCTCGCCCGGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: EAGGGAQPDRGYGASTSAAPSVL*PRPGSA
Trigger: TGCACTGCCCGGGCGAGGGCAGAGGACACTGGGAGC...GGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp GGTGGTGAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTCCCTCCCGGTCTCCCTaGCGGACTGCCTTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: GGEAGGGAQPDRGYGASTPSRSP*RTAFPQ
Trigger: CTGGGGGAAGGCAGTCCGGCAGGGAGACCGGGAGGG...AGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTCACCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCGGTCGTGGGCGACGCTaGATCCGGGGCCAGCACATC +
Preference number: 4 (lower is better)
Translates to: EAGGGAQPDRGYGASTSAGRGRR*IRGQHI
Trigger: GATGTGCTGGCCCCGGATCCAGCGTCGCCCACGACC...GGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCGCCCATGGGCGAGCCTaGCTGTCCCCCGTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: EAGGGAQPDRGYGASTSAAHGRA*LSPVPL
Trigger: CAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGC...GGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp CCACAGAGCGCCCACATCCCCACTCCTGCCCGGGGTGAGGTGAATCTAGCACTGGACGCTGGGCGAGGCTaGTGCGGTCGTGGGCGACGC +
Preference number: 4 (lower is better)
Translates to: PQSAHIPTPARGEVNLALDAGRG*CGRGRR
Trigger: GCGTCGCCCACGACCGCAGCAGCCTCGCCCAGCGTC...CAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGGGATGTGGGCGCTCTGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACCCAGGGGCCCTGAATaGCCTTCCTGGGTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: RLEVGHSLTVAMAPALPPPRGPE*PSWVGP
Trigger: AGGCCCCACCCAGGAAGGGCATTCAGGGCCCCTGGG...TGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GCCGCTGGTCCACACACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCGGATCACGGAGACGCTaGGCGAGGCTGCTGCGGTCG +
Preference number: 4 (lower is better)
Translates to: AAGPHTSIGAWVRLVPACGSRRR*ARLLRS
Trigger: CGACCGCAGCAGCCTCGCCCAGCGTCTCCGTGATCC...GCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTGTGTGGACCAGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp AAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACGGGGCTGCTCCATGGCAGTaGGGCTGCCCTCGGGGATCA +
Preference number: 4 (lower is better)
Translates to: KHWGLGAAGPSMPPAQDGAAPWQ*GCPRGS
Trigger: TGATCCCCGAGGGCAGCCCCACTGCCATGGAGCAGC...CCCGTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp AAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACGGGGGGCCAGGGGCCAGATaGGGTAGAACACCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: KHWGLGAAGPSMPPAQDGGPGAR*GRTPGP
Trigger: AGGGCCTGGTGTTCTACCCCATCTGGCCCCTGGCCC...CCCGTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTT
69% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CAGCCACGGTGCCCTCGCCCACCGACACGCGGGCCGAGTGGATTTTGGGGATGGATAAGCCCAGCCTGCTaGGGGTTCCGGAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: QPRCPRPPTRGPSGFWGWISPAC*GFRRPQ
Trigger: CTGGGGCCTCCGGAACCCCCAGCAGGCTGGGCTTAT...CCATCCCCAAAATCCACTCGGCCCGCGTGTCGGTGGGCGAGGGCACCGTGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR TCA 90 bp CTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTCGGGGCTGTAGGGGCTaGGCAGCTCCCGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: LKAHGRAWLSPVPLEVTCRGCRG*AAPGWR
Trigger: TCGCCACCCGGGAGCTGCTCAGCCCCTACAGCCCCG...ACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR TCA 90 bp CAGCCACGGTGCCCTCGCCCACCGACACGCGGGCCGAGTGGATTTTGGGGATGGGCGAGTGCCAGCAGCTaGACTAAGAGCCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: QPRCPRPPTRGPSGFWGWASASS*TKSPRE
Trigger: CTCCCTGGGGCTCTTAGTTCAGCTGCTGGCACTCGC...CCATCCCCAAAATCCACTCGGCCCGCGTGTCGGTGGGCGAGGGCACCGTGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR GCA 90 bp AAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTGAGGCTGGGCGAGGCTGCTaGGGTCGTGGGCGACGCTGG +
Preference number: 4 (lower is better)
Translates to: KAHGRAWLSPVPLEVTCEAGRGC*GRGRRW
Trigger: CCAGCGTCGCCCACGACCGCAGCAGCCTCGCCCAGC...CTCACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AGAGGATGCGCACGATGTAGCGCTGCTCGTTGGGGCAGCTGTAGCAGCGCAGGTGCTGGGCGAGGCTGCTaGGGTCGTGGGCGACGCTGG +
Preference number: 4 (lower is better)
Translates to: RGCARCSAARWGSCSSAGAGRGC*GRGRRW
Trigger: CCAGCGTCGCCCACGACCGCAGCAGCCTCGCCCAGC...ACCTGCGCTGCTACAGCTGCCCCAACGAGCAGCGCTACATCGTGCGCATCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411679.2
ENST00000436674.5
CDS-3UTR GCA 90 bp AAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTGAGGACGCTGGGCGAGGCTaGTGCGGTCGTGGGCGACGC +
Preference number: 4 (lower is better)
Translates to: KAHGRAWLSPVPLEVTCEDAGRG*CGRGRR
Trigger: GCGTCGCCCACGACCGCAGCAGCCTCGCCCAGCGTC...CTCACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp ATGCAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGGACGCTGGGCGAGGCTaGTGCGGTCGTGGGCGACGC +
Preference number: 4 (lower is better)
Translates to: MQAGRAQVRQGIARCVGEDAGRG*CGRGRR
Trigger: GCGTCGCCCACGACCGCAGCAGCCTCGCCCAGCGTC...CTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp TGCAGGATCCTGCGAGTGCCAGCAGCTGAACTAAGAGCCCCAGGGAGCGTGTGGAGCCGGCAGCCACGGTaGCCTCGCCCACCGACACGC +
Preference number: 4 (lower is better)
Translates to: CRILRVPAAELRAPGSVWSRQPR*PRPPTR
Trigger: GCGTGTCGGTGGGCGAGGGCACCGTGGCTGCCGGCT...CCACACGCTCCCTGGGGCTCTTAGTTCAGCTGCTGGCACTCGCAGGATCCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCAGGGGGAGCCACGGCTTaGCGACCTCAGCCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: RLEVGHSLTVAMAPALPPGGATA*RPQPES
Trigger: ACTCTCAGGCTGAGGTCGGCAAGCCGTGGCTCCCCC...TGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp CACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACTGGACAGGGGAGGGATaGAGGCGGGAAGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HKHWGLGAAGPSMPPAQDWTGEG*RREEPR
Trigger: CCTGGGCTCTTCCCGCCTGCATCCCTCCCCTGTCCA...GTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp AGGCCAGGAAGACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACGGTCGTGGGCGACGCTaGATCCGGGGCCAGCACATC +
Preference number: 4 (lower is better)
Translates to: RPGRRLGPNSPHRWQGGNGRGRR*IRGQHI
Trigger: GATGTGCTGGCCCCGGATCCAGCGTCGCCCACGACC...GTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGTCTTCCTGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCAGCTGCTCCATGGCAGTaGGGCTGCCCTCGGGGATCA +
Preference number: 4 (lower is better)
Translates to: GGGAQPDRGYGASTSATAAAPWQ*GCPRGS
Trigger: TGATCCCCGAGGGCAGCCCCACTGCCATGGAGCAGC...TGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp AGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCATGTGGCCACGACAGGTaGGGATACCCAGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RLEVGHSLTVAMAPALPPCGHDR*GYPGAQ
Trigger: CTGGGCCCCTGGGTATCCCCACCTGTCGTGGCCACA...TGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACCGGCAGTGCGGGCTGTaGGCTGTCCTTGGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: HKHWGLGAAGPSMPPAQDRQCGL*AVLGRP
Trigger: TGGCCTACCAAGGACAGCCCACAGCCCGCACTGCCG...GTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACCCTGGGAAGGAGGGCTaGGAGCCCCTGAGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: HKHWGLGAAGPSMPPAQDPGKEG*EPLSPE
Trigger: TTCAGGGCTCAGGGGCTCCCAGCCCTCCTTCCCAGG...GTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp AAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACGGGACACCAGGCCCTGTGTaGATAGGGGCCCCGAGAGGA +
Preference number: 4 (lower is better)
Translates to: KHWGLGAAGPSMPPAQDGTPGPV*IGAPRG
Trigger: TCCTCTCGGGGCCCCTATCCACACAGGGCCTGGTGT...CCCGTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCAGCCCGCAGGCCAGGAAGACGGCTaGGCCCCAACTCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: GHSLTVAMAPALPPLQPAGQEDG*APTLLT
Trigger: TGTGAGGAGAGTTGGGGCCCAGCCGTCTTCCTGGCC...TGCGGGCTGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CCCACTCCTGCCCGGGGTGAGGTGAATCTAGCACTGGACAAAGGTGGACAGGGGCCCTCCCGGGCAGCTTaGGCCCAACTGCTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: PTPARGEVNLALDKGGQGPSRAA*AQLLRP
Trigger: GGGGCGGAGCAGTTGGGCCCAAGCTGCCCGGGAGGG...CCCCTGTCCACCTTTGTCCAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp ACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCCCCTCCCGGGCAGCTTaGGCCCAACTGCTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: TAGPQLSSQVAGREPVHSPSRAA*AQLLRP
Trigger: GGGGCGGAGCAGTTGGGCCCAAGCTGCCCGGGAGGG...GGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCCCTCCCGGGCAGCTTaGGCCCAACTGCTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: DGWAPTLLTGGREGTCSFPSRAA*AQLLRP
Trigger: GGGGCGGAGCAGTTGGGCCCAAGCTGCCCGGGAGGG...GAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR CAA 72 bp GCTAGAAGGCTGCAGCCGCTGGTCCACACACAAGCATaGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCC +
Preference number: 4 (lower is better)
Translates to: ARRLQPLVHTQA*GPGCGWSQHAP
Trigger: GGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTGTGTGGACCAGCGGCTGCAGCCTTCTAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp GGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCAGCCCGCACATAGACCTTGTAGGTaGAGGCGTGCCGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GHSLTVAMAPALPPLQPAHRPCR*RRAAGP
Trigger: TGGCCCTGCGGCACGCCTTCACCTACAAGGTCTATG...TGCGGGCTGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp CAGGTGCATGTAGATCACAGTCCTCAGTCCAGGCAGCCCCTGGGTGTCTCGTCCGACGCTGGGCGAGGCTaGTGCGGTCGTGGGCGACGC +
Preference number: 4 (lower is better)
Translates to: QVHVDHSPQSRQPLGVSSDAGRG*CGRGRR
Trigger: GCGTCGCCCACGACCGCAGCAGCCTCGCCCAGCGTC...GGACGAGACACCCAGGGGCTGCCTGGACTGAGGACTGTGATCTACATGCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411679.2
CDS-3UTR GCA 90 bp GGTGGTGAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTGAGGGGCTAGAAGGCTaGAGCCGCTGGTCCACACAC +
Preference number: 4 (lower is better)
Translates to: GGEAGGGAQPDRGYGASTEGLEG*SRWSTH
Trigger: GTGTGTGGACCAGCGGCTGCAGCCTTCTAGCCCCTC...AGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTCACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCAAGTATAAGCCCAGCCTaGTGGGGGTTCCGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: RLEVGHSLTVAMAPALPPSISPA*WGFRRP
Trigger: GGGCCTCCGGAACCCCCAGCAGGCTGGGCTTATACT...TGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp GGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCAAAGCTAGCTCGGCCGTaGCAGTCGCCAGCACACCCA +
Preference number: 4 (lower is better)
Translates to: GGGAQPDRGYGASTSATAKLARP*QSPAHP
Trigger: TGGGTGTGCTGGCGACTGGCACGGCCGAGCTAGCTT...TGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361684.8
CDS-3UTR CCA 90 bp ATGCAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGAGCCTCAGGAGCCCATaGCGGTGGCGGCGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: MQAGRAQVRQGIARCVGESLRSP*RWRRLR
Trigger: CCGCAGACGCCGCCACCGCCATGGGCTCCTGAGGCT...CTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CCACAGAGCGCCCACATCCCCACTCCTGCCCGGGGTGAGGTGAATCTAGCACTGGGTCGTGGGCGACGCTaGATCCGGGGCCAGCACATC +
Preference number: 4 (lower is better)
Translates to: PQSAHIPTPARGEVNLALGRGRR*IRGQHI
Trigger: GATGTGCTGGCCCCGGATCCAGCGTCGCCCACGACC...CAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGGGATGTGGGCGCTCTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTAGGCTGCTGCGGTCGTaGGCGACGCTGGATCCGGGG +
Preference number: 4 (lower is better)
Translates to: LKAHGRAWLSPVPLEVTCRLLRS*ATLDPG
Trigger: CCCCGGATCCAGCGTCGCCCACGACCGCAGCAGCCT...ACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGTGGTGAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTATTCCTGAAGGCCCATaGGCGAGCCTGGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: GGEAGGGAQPDRGYGASTIPEGP*ASLAVP
Trigger: GGGGACAGCCAGGCTCGCCCATGGGCCTTCAGGAAT...AGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTCACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp CACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACATTCCTGAAGGCCCATaGGCGAGCCTGGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: HKHWGLGAAGPSMPPAQDIPEGP*ASLAVP
Trigger: GGGGACAGCCAGGCTCGCCCATGGGCCTTCAGGAAT...GTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp GGTGGTGAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTACAAGCATTGGGGCCTaGGTGCGGCTGGTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GGEAGGGAQPDRGYGASTTSIGA*VRLVPA
Trigger: TGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGT...AGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTCACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp CACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACACAAGCATTGGGGCCTaGGTGCGGCTGGTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: HKHWGLGAAGPSMPPAQDTSIGA*VRLVPA
Trigger: TGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGT...GTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp CACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACGTATTGCACGGTGTGTaGGGGAGCCACGGCTTGCCG +
Preference number: 4 (lower is better)
Translates to: HKHWGLGAAGPSMPPAQDVLHGV*GSHGLP
Trigger: CGGCAAGCCGTGGCTCCCCCACACACCGTGCAATAC...GTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCAACACCAGGCCCTGTGTaGATAGGGGCCCCGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GGGAQPDRGYGASTSATATPGPV*IGAPRG
Trigger: TCCTCTCGGGGCCCCTATCCACACAGGGCCTGGTGT...TGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGTGGTGAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTCCTGTCCAAGGGCTCTaGGCCCAGCACTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: GGEAGGGAQPDRGYGASTPVQGL*AQHCRI
Trigger: GATCCTGCAGTGCTGGGCCCAGAGCCCTTGGACAGG...AGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTCACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCACCAGGTCTAGAGGTGTaGAGGGGGAGAGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GGGAQPDRGYGASTSATAPGLEV*RGRGGA
Trigger: AGCCCCTCCTCTCCCCCTCCACACCTCTAGACCTGG...TGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGTGGTGAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTGGCCAGGAAGACGGCTaGGCCCCAACTCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: GGEAGGGAQPDRGYGASTGQEDG*APTLLT
Trigger: TGTGAGGAGAGTTGGGGCCCAGCCGTCTTCCTGGCC...AGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTCACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCTGCCCCCGCCACGTTaGCGTGGAAAGGGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: DGWAPTLLTGGREGTCSFLPPPR*RGKGAG
Trigger: GCCCGCTCCCTTTCCACGCCAACGTGGCGGGGGCAG...GAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361684.8
3UTR CAA 72 bp GGATGCAGGCGGGAAGAGCCCAGGTCAGACAGGGTATaGCACGGTGTGTGGGGGAGCCACGGCTTGCCGACC +
Preference number: 4 (lower is better)
Translates to: GCRREEPRSDRV*HGVWGSHGLPT
Trigger: GGTCGGCAAGCCGTGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTGCATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp GCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGGCCTCGGGGCTGTAGGGGCTaGGCAGCTCCCGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: ATLGRRKPREWESAALWPRGCRG*AAPGWR
Trigger: TCGCCACCCGGGAGCTGCTCAGCCCCTACAGCCCCG...AGGCCAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp GCCGCTGGTCCACACACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCATAGACCTTGTAGGTaGAGGCGTGCCGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: AAGPHTSIGAWVRLVPACHRPCR*RRAAGP
Trigger: TGGCCCTGCGGCACGCCTTCACCTACAAGGTCTATG...GCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTGTGTGGACCAGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp GGGTCCCTCTCCCTTACCCTACCAGCTTCTCCAGGTGACTGCAGCCCAAACCCATGTCGCGGGCGCCACTaGGGCTGTGGGAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: GSLSLTLPASPGDCSPNPCRGRH*GCGSGR
Trigger: TCTCCCGCTCCCACAGCCTCAGTGGCGCCCGCGACA...TGGGTTTGGGCTGCAGTCACCTGGAGAAGCTGGTAGGGTAAGGGAGAGGGACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp AAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACGGGAGAAAGAATCCCCAGTaGACACCGGCAGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: KHWGLGAAGPSMPPAQDGRKNPQ*TPAGSL
Trigger: GAGGGACCCTGCCGGTGTTCACTGGGGATTCTTTCT...CCCGTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp GCCGCTGGTCCACACACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCGGAGAGACAGCTTGGTaGAAGCAGATGGCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: AAGPHTSIGAWVRLVPACGETAW*KQMAGQ
Trigger: CTGCCCCGCCATCTGCTTTCACCAAGCTGTCTCTCC...GCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTGTGTGGACCAGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp GGTGGTGAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTGGAGAGACAGCTTGGTaGAAGCAGATGGCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GGEAGGGAQPDRGYGASTGETAW*KQMAGQ
Trigger: CTGCCCCGCCATCTGCTTTCACCAAGCTGTCTCTCC...AGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTCACCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp CGGGCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCGCTGGGCGAGGCTGCTaGGGTCGTGGGCGACGCTGG +
Preference number: 4 (lower is better)
Translates to: RAVQAGPCINIPEGPWASAGRGC*GRGRRW
Trigger: CCAGCGTCGCCCACGACCGCAGCAGCCTCGCCCAGC...GCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp CACGATGAAGAGGATGCGCACGATGTAGCGCTGCTCGTTGGGGCAGCTGTAGCAGCTGGGCGAGGCTGCTaGGGTCGTGGGCGACGCTGG +
Preference number: 4 (lower is better)
Translates to: HDEEDAHDVALLVGAAVAAGRGC*GRGRRW
Trigger: CCAGCGTCGCCCACGACCGCAGCAGCCTCGCCCAGC...TGCTACAGCTGCCCCAACGAGCAGCGCTACATCGTGCGCATCCTCTTCATCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411679.2
ENST00000436674.5
CDS-3UTR GCA 90 bp CAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCACCATGGCAGTGGGGCTaGCCTCGGGGATCACGGAGA +
Preference number: 4 (lower is better)
Translates to: QAGRAQVRQGIARCVGEPPWQWG*PRGSRR
Trigger: TCTCCGTGATCCCCGAGGGCAGCCCCACTGCCATGG...TGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp CAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCAGGGGGAGCCACGGCTTaGCGACCTCAGCCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: QAGRAQVRQGIARCVGEPGGATA*RPQPES
Trigger: ACTCTCAGGCTGAGGTCGGCAAGCCGTGGCTCCCCC...TGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp TGCAGGATCCTGCGAGTGCCAGCAGCTGAACTAAGAGCCCCAGGGAGCGTGTGGCCCAGGGGCCCTGAATaGCCTTCCTGGGTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: CRILRVPAAELRAPGSVWPRGPE*PSWVGP
Trigger: AGGCCCCACCCAGGAAGGGCATTCAGGGCCCCTGGG...CCACACGCTCCCTGGGGCTCTTAGTTCAGCTGCTGGCACTCGCAGGATCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp CACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACCTTCAACAGAAGCGGTaGCCAGGGGCCCTGAATGCC +
Preference number: 4 (lower is better)
Translates to: HKHWGLGAAGPSMPPAQDLQQKR*PGALNA
Trigger: GGCATTCAGGGCCCCTGGGCACCGCTTCTGTTGAAG...GTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp ACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCAGCCCGCACCTAGAATTCATCCCTCCCGGTCTCCCTaGCGGACTGCCTTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: TVAMAPALPPLQPAPRIHPSRSP*RTAFPQ
Trigger: CTGGGGGAAGGCAGTCCGGCAGGGAGACCGGGAGGG...ATGAATTCTAGGTGCGGGCTGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR CCA 90 bp ATGCAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGAGGAGCCCATGGCGGTaGCGGCGTCTGCGGACGATG +
Preference number: 4 (lower is better)
Translates to: MQAGRAQVRQGIARCVGERSPWR*RRLRTM
Trigger: CATCGTCCGCAGACGCCGCCACCGCCATGGGCTCCT...CTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp AGCAGCGCAGGTGCATGTAGATCACAGTCCTCAGTCCAGGCAGCCCCTGGGTGTAGGCTGCTGCGGTCGTaGGCGACGCTGGATCCGGGG +
Preference number: 4 (lower is better)
Translates to: SSAGACRSQSSVQAAPGCRLLRS*ATLDPG
Trigger: CCCCGGATCCAGCGTCGCCCACGACCGCAGCAGCCT...ACACCCAGGGGCTGCCTGGACTGAGGACTGTGATCTACATGCACCTGCGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411679.2
CDS-3UTR CCA 90 bp AAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACGGGCACACTTCTCCAGGATaGCCAGGAGCATGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: KHWGLGAAGPSMPPAQDGHTSPG*PGACLA
Trigger: GGCAAGGCATGCTCCTGGCCATCCTGGAGAAGTGTG...CCCGTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp GGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCAGCCCGCAGGGCCGAGTGGATTTTaGGGATGGCCCCACACTTCT +
Preference number: 4 (lower is better)
Translates to: GHSLTVAMAPALPPLQPAGPSGF*GWPHTS
Trigger: AGAAGTGTGGGGCCATCCCCAAAATCCACTCGGCCC...TGCGGGCTGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp CGGGCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCGAGCGGGAGAGGCCGTaGGCGCCACCACGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RAVQAGPCINIPEGPWASERERP*APPRQV
Trigger: CACCTGGCGTGGTGGCGCCCACGGCCTCTCCCGCTC...GCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp ACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCGCCCATGGGCGAGCCTaGCTGTCCCCCGTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: TAGPQLSSQVAGREPVHSAHGRA*LSPVPL
Trigger: CAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGC...GGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGATGGAGCGGTCGGGCACATGTTCCCGTCCCCACGACCCCACGGACCGCTGATTCCACACACAAGCATTaGGGCCTGGGTGCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GWSGRAHVPVPTTPRTADSTHKH*GLGAAG
Trigger: ACCAGCCGCACCCAGGCCCCAATGCTTGTGTGTGGA...ATCAGCGGTCCGTGGGGTCGTGGGGACGGGAACATGTGCCCGACCGCTCCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCAGCCCGCAGAAGGCTGCAGCCGCTaGTCCACACACAAGCATTGG +
Preference number: 4 (lower is better)
Translates to: GHSLTVAMAPALPPLQPAEGCSR*STHKHW
Trigger: CCAATGCTTGTGTGTGGACCAGCGGCTGCAGCCTTC...TGCGGGCTGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCAGCCCGCAGGGGCCTGTGACTCCTaGTGTCTGGCTCTGATCCTT +
Preference number: 4 (lower is better)
Translates to: GHSLTVAMAPALPPLQPAGACDS*CLALIL
Trigger: AAGGATCAGAGCCAGACACCAGGAGTCACAGGCCCC...TGCGGGCTGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CCCACTCCTGCCCGGGGTGAGGTGAATCTAGCACTGGACAAAGGTGGACAGGGGGCCCCAGGGAGCGTGTaGGACAGATGGGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PTPARGEVNLALDKGGQGAPGSV*DRWGAR
Trigger: CCTGGCTCCCCATCTGTCCCACACGCTCCCTGGGGC...CCCCTGTCCACCTTTGTCCAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp ATGCAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGGCCCCAGGGAGCGTGTaGGACAGATGGGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: MQAGRAQVRQGIARCVGEAPGSV*DRWGAR
Trigger: CCTGGCTCCCCATCTGTCCCACACGCTCCCTGGGGC...CTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCCCGCCACGTTGGCGTaGAAAGGGAGCGGGCACACC +
Preference number: 4 (lower is better)
Translates to: DGWAPTLLTGGREGTCSFPATLA*KGSGHT
Trigger: GGTGTGCCCGCTCCCTTTCCACGCCAACGTGGCGGG...GAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361684.8
CDS-3UTR CCA 90 bp GAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCTCTTGCAAAGCGCCTTaGTCCATCCGCCTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: EAGGGAQPDRGYGASTSASCKAP*SIRLPL
Trigger: GAGAGGGAGGCGGATGGACCAAGGCGCTTTGCAAGA...GGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361684.8
CDS-3UTR TCA 90 bp ACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACGAAGCCAGAGATGGCCTaGGCGGCAGTTGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: TSIGAWVRLVPACPQHRTKPEMA*AAVVIR
Trigger: CCTGATGACAACTGCCGCTCAGGCCATCTCTGGCTT...CGTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp CGGGCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCTGTCGCGGGCGCCACTaGGGCTGTGGGAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: RAVQAGPCINIPEGPWASCRGRH*GCGSGR
Trigger: TCTCCCGCTCCCACAGCCTCAGTGGCGCCCGCGACA...GCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR TCA 90 bp GGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCAGTTGCCGACCTCAGCCTaGGAGTCTCGCGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GWAPTLLTGGREGTCSFQLPTSA*ESRGEE
Trigger: CTCCTCCCCGCGAGACTCTCAGGCTGAGGTCGGCAA...CTGGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp CGGGCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCGGTGCCCAGGGGCCCTaGATGCCCTTCCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RAVQAGPCINIPEGPWASGAQGP*MPFLGG
Trigger: CCCACCCAGGAAGGGCATTCAGGGCCCCTGGGCACC...GCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AAGCAAGGGCTCTGCCCAAAGCTATCGAGGAAGGACCCAAGTGAGCCGGCAGTGGGCGTCTGCGGACGATaGGCGGCAGCCGGACTCTGC +
Preference number: 4 (lower is better)
Translates to: KQGLCPKLSRKDPSEPAVGVCGR*AAAGLC
Trigger: GCAGAGTCCGGCTGCCGCGCATCGTCCGCAGACGCC...CACTGCCGGCTCACTTGGGTCCTTCCTCGATAGCTTTGGGCAGAGCCCTTGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACGGGAGCAGTCGCGGACGGTaGCGAAGTACACGTAGTACT +
Preference number: 4 (lower is better)
Translates to: KHWGLGAAGPSMPPAQDGSSRGR*RSTRST
Trigger: AGTACTACGTGTACTTCGGCACCGTCCGCGACTGCT...CCCGTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp CAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCACCCCATCCCGGTACTTaGCGAAGGCCTGGAGGACCA +
Preference number: 4 (lower is better)
Translates to: QAGRAQVRQGIARCVGEPPHPGT*RRPGGP
Trigger: TGGTCCTCCAGGCCTTCGGCAAGTACCGGGATGGGG...TGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp CACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACCCGCAGGGCCAGGGCTaGAAAGAACATCTCCACACA +
Preference number: 4 (lower is better)
Translates to: HKHWGLGAAGPSMPPAQDPQGQG*KEHLHT
Trigger: TGTGTGGAGATGTTCTTTGCAGCCCTGGCCCTGCGG...GTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp GCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGGCCTCGGCTGGTCCCAGCATaGCCCCAGCACAGGACGGGC +
Preference number: 4 (lower is better)
Translates to: ATLGRRKPREWESAALWPRLVPA*PQHRTG
Trigger: GCCCGTCCTGTGCTGGGGGCATGCTGGGACCAGCCG...AGGCCAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AAGCAAGGGCTCTGCCCAAAGCTATCGAGGAAGGACCCAAGTGAGCCGGCAGTGCGGCTGGTCCCAGCATaGCCCCAGCACAGGACGGGC +
Preference number: 4 (lower is better)
Translates to: KQGLCPKLSRKDPSEPAVRLVPA*PQHRTG
Trigger: GCCCGTCCTGTGCTGGGGGCATGCTGGGACCAGCCG...CACTGCCGGCTCACTTGGGTCCTTCCTCGATAGCTTTGGGCAGAGCCCTTGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp CAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCAGAGGGGCTAGAAGGCTaGAGCCGCTGGTCCACACAC +
Preference number: 4 (lower is better)
Translates to: QAGRAQVRQGIARCVGEPEGLEG*SRWSTH
Trigger: GTGTGTGGACCAGCGGCTGCAGCCTTCTAGCCCCTC...TGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AGGCCAGGAAGACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACGGTCAGACAGGGTATTaGACGGTGTGTGGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: RPGRRLGPNSPHRWQGGNGQTGY*TVCGGA
Trigger: GGCTCCCCCACACACCGTGCAATACCCTGTCTGACC...GTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGTCTTCCTGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp ACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCTGGACAGGGGAGGGATaGAGGCGGGAAGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TAGPQLSSQVAGREPVHSWTGEG*RREEPR
Trigger: CCTGGGCTCTTCCCGCCTGCATCCCTCCCCTGTCCA...GGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CATGTAGATCACAGTCCTCAGTCCAGGCAGCCCCTGGGTGTCTCGTCCCAGCTCAGGAGCCCATGGCGGTaGCGGCGTCTGCGGACGATG +
Preference number: 4 (lower is better)
Translates to: HVDHSPQSRQPLGVSSQLRSPWR*RRLRTM
Trigger: CATCGTCCGCAGACGCCGCCACCGCCATGGGCTCCT...GAGCTGGGACGAGACACCCAGGGGCTGCCTGGACTGAGGACTGTGATCTACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411679.2
CDS-3UTR CCA 90 bp CAGGTGCATGTAGATCACAGTCCTCAGTCCAGGCAGCCCCTGGGTGTCTCGTCCGGTCGTGGGCGACGCTaGATCCGGGGCCAGCACATC +
Preference number: 4 (lower is better)
Translates to: QVHVDHSPQSRQPLGVSSGRGRR*IRGQHI
Trigger: GATGTGCTGGCCCCGGATCCAGCGTCGCCCACGACC...GGACGAGACACCCAGGGGCTGCCTGGACTGAGGACTGTGATCTACATGCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411679.2
CDS-3UTR CCA 90 bp TTATGCATCCTAAGGAGGAGGAGGGGATGGAGCGGTCGGGCACATGTTCCCGTCAGGCTGCTGCGGTCGTaGGCGACGCTGGATCCGGGG +
Preference number: 4 (lower is better)
Translates to: LCILRRRRGWSGRAHVPVRLLRS*ATLDPG
Trigger: CCCCGGATCCAGCGTCGCCCACGACCGCAGCAGCCT...GACGGGAACATGTGCCCGACCGCTCCATCCCCTCCTCCTCCTTAGGATGCATAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp AGATCACAGTCCTCAGTCCAGGCAGCCCCTGGGTGTCTCGTCCCAGCTCTCATGGGATCACGGAGACGCTaGGCGAGGCTGCTGCGGTCG +
Preference number: 4 (lower is better)
Translates to: RSQSSVQAAPGCLVPALMGSRRR*ARLLRS
Trigger: CGACCGCAGCAGCCTCGCCCAGCGTCTCCGTGATCC...CATGAGAGCTGGGACGAGACACCCAGGGGCTGCCTGGACTGAGGACTGTGATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411679.2
CDS-3UTR CCA 90 bp GGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCATACTTGCCGAAGGCCTaGAGGACCACAGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: GGGAQPDRGYGASTSATAYLPKA*RTTVLT
Trigger: GGTCAGCACTGTGGTCCTCCAGGCCTTCGGCAAGTA...TGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp CACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACGGGCCGAGTGGATTTTaGGGATGGCCCCACACTTCT +
Preference number: 4 (lower is better)
Translates to: HKHWGLGAAGPSMPPAQDGPSGF*GWPHTS
Trigger: AGAAGTGTGGGGCCATCCCCAAAATCCACTCGGCCC...GTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp GGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCATGGAGATGCTCTTCATaGGGGCACAGCGGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: GGGAQPDRGYGASTSATAWRCSS*GHSGLV
Trigger: CACAAGGCCGCTGTGCCCCCATGAAGAGCATCTCCA...TGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CACTTCCGCCACTGCAGCCCGCACCTAGAATTCATCATCAGAGCTGAGCAGGAGGAGCGGGAGAGGCCGTaGGCGCCACCACGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: HFRHCSPHLEFIIRAEQEERERP*APPRQV
Trigger: CACCTGGCGTGGTGGCGCCCACGGCCTCTCCCGCTC...CTCCTGCTCAGCTCTGATGATGAATTCTAGGTGCGGGCTGCAGTGGCGGAAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR CCA 90 bp ACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACGGAAGGCTGCAGCCGCTaGTCCACACACAAGCATTGG +
Preference number: 4 (lower is better)
Translates to: TSIGAWVRLVPACPQHRTEGCSR*STHKHW
Trigger: CCAATGCTTGTGTGTGGACCAGCGGCTGCAGCCTTC...CGTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp AGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCAGAAGGCTGCAGCCGCTaGTCCACACACAAGCATTGG +
Preference number: 4 (lower is better)
Translates to: RLEVGHSLTVAMAPALPPEGCSR*STHKHW
Trigger: CCAATGCTTGTGTGTGGACCAGCGGCTGCAGCCTTC...TGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCAGGGGCCTGTGACTCCTaGTGTCTGGCTCTGATCCTT +
Preference number: 4 (lower is better)
Translates to: GGGAQPDRGYGASTSATAGACDS*CLALIL
Trigger: AAGGATCAGAGCCAGACACCAGGAGTCACAGGCCCC...TGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp TTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTGGCCACGACAGGTaGGGATACCCAGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: FLKAHGRAWLSPVPLEVTCGHDR*GYPGAQ
Trigger: CTGGGCCCCTGGGTATCCCCACCTGTCGTGGCCACA...TGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp ATGCAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCGGCAGTGCGGGCTGTaGGCTGTCCTTGGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: MQAGRAQVRQGIARCVGERQCGL*AVLGRP
Trigger: TGGCCTACCAAGGACAGCCCACAGCCCGCACTGCCG...CTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCAGGGGCCAGGGGCCAGATaGGGTAGAACACCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GWAPTLLTGGREGTCSFQGPGAR*GRTPGP
Trigger: AGGGCCTGGTGTTCTACCCCATCTGGCCCCTGGCCC...CTGGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp ACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACGCGCAAACAGCAACGCTaGGCAGGCGAAAACCAAGGG +
Preference number: 4 (lower is better)
Translates to: TSIGAWVRLVPACPQHRTRKQQR*AGENQG
Trigger: CCCTTGGTTTTCGCCTGCCCAGCGTTGCTGTTTGCG...CGTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCACGCAAACAGCAACGCTaGGCAGGCGAAAACCAAGGG +
Preference number: 4 (lower is better)
Translates to: GGGAQPDRGYGASTSATARKQQR*AGENQG
Trigger: CCCTTGGTTTTCGCCTGCCCAGCGTTGCTGTTTGCG...TGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCAAGTCCAGGCAGCCCCTaGGTGTCTCGTCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: QAGRAQVRQGIARCVGEPSPGSP*VSRPSS
Trigger: AGAGCTGGGACGAGACACCCAGGGGCTGCCTGGACT...TGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR CCA 90 bp GGTGGTGAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTGGAGATGCTCTTCATaGGGGCACAGCGGCCGTAAG +
Preference number: 4 (lower is better)
Translates to: GGEAGGGAQPDRGYGASTWRCSS*GHSGRK
Trigger: CTTACGGCCGCTGTGCCCCCATGAAGAGCATCTCCA...AGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTCACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633438.1
CDS-3UTR TCA 90 bp GCCGCTGGTCCACACACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCGTAGATGGGCACGATaGAGAGGATGCGCACGATGT +
Preference number: 4 (lower is better)
Translates to: AAGPHTSIGAWVRLVPACRRWAR*RGCARC
Trigger: ACATCGTGCGCATCCTCTTCATCGTGCCCATCTACG...GCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTGTGTGGACCAGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp GGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCACGTAGATGGGCACGATaGAGAGGATGCGCACGATGT +
Preference number: 4 (lower is better)
Translates to: GGGAQPDRGYGASTSATARRWAR*RGCARC
Trigger: ACATCGTGCGCATCCTCTTCATCGTGCCCATCTACG...TGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR TCA 90 bp AAGCAAGGGCTCTGCCCAAAGCTATCGAGGAAGGACCCAAGTGAGCCGGCAGTGAGGTGGGGCACAGCCTaGCCGTGGCTATGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: KQGLCPKLSRKDPSEPAVRWGTA*PWLWRQ
Trigger: CTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCT...CACTGCCGGCTCACTTGGGTCCTTCCTCGATAGCTTTGGGCAGAGCCCTTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp CAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCGGTGCCCAGGGGCCCTaGATGCCCTTCCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QAGPCINIPEGPWASLAVGAQGP*MPFLGG
Trigger: CCCACCCAGGAAGGGCATTCAGGGCCCCTGGGCACC...GACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp CAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCACTCAGACCTTTCCCCTaGAACGGGAGGGAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: QAGRAQVRQGIARCVGEPLRPFP*NGREKP
Trigger: GGGCTTCTCCCTCCCGTTTCAGGGGAAAGGTCTGAG...TGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp GGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCAGGGTCCTGACCACTCCTaGGGCCTGTCCAAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GWAPTLLTGGREGTCSFQGPDHS*GLSKGS
Trigger: AGAGCCCTTGGACAGGCCTCAGGAGTGGTCAGGACC...CTGGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp TTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACACCCTCACTGTCATGGTaGCTGGCAGCAGGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: FLKAHGRAWLSPVPLEVTPSLSW*LAAGGS
Trigger: GGAGCCTCCTGCTGCCAGGCACCATGACAGTGAGGG...TGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp CATGTAGATCACAGTCCTCAGTCCAGGCAGCCCCTGGGTGTCTCGTCCCAGCTCCCATGGCAGTGGGGCTaGCCTCGGGGATCACGGAGA +
Preference number: 4 (lower is better)
Translates to: HVDHSPQSRQPLGVSSQLPWQWG*PRGSRR
Trigger: TCTCCGTGATCCCCGAGGGCAGCCCCACTGCCATGG...GAGCTGGGACGAGACACCCAGGGGCTGCCTGGACTGAGGACTGTGATCTACATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411679.2
CDS-3UTR GCA 90 bp CTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTCCCCATCCCGGTACTTaGCGAAGGCCTGGAGGACCA +
Preference number: 4 (lower is better)
Translates to: LKAHGRAWLSPVPLEVTCPHPGT*RRPGGP
Trigger: TGGTCCTCCAGGCCTTCGGCAAGTACCGGGATGGGG...ACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp AGGCCAGGAAGACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCAGCACTTCCGCCACTaGAGCCCGCACCTAGAATTC +
Preference number: 4 (lower is better)
Translates to: RPGRRLGPNSPHRWQGGNQHFRH*SPHLEF
Trigger: GAATTCTAGGTGCGGGCTGCAGTGGCGGAAGTGCTG...GTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGTCTTCCTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp GGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCTGGCCTGGTGCTCCCAGTGTCCTCTaGCCTCGCCCGGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: GPINKGGVSTVPAASWPGAPSVL*PRPGSA
Trigger: TGCACTGCCCGGGCGAGGGCAGAGGACACTGGGAGC...ACCAGGCCAGGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp CAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCCGGCTGGTCCCAGCATaGCCCCAGCACAGGACGGGC +
Preference number: 4 (lower is better)
Translates to: QAGPCINIPEGPWASLAVRLVPA*PQHRTG
Trigger: GCCCGTCCTGTGCTGGGGGCATGCTGGGACCAGCCG...GACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp GCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGGCCTGCATTGGGGCCTGGGTaGGGCTGGTCCCAGCATGCC +
Preference number: 4 (lower is better)
Translates to: ATLGRRKPREWESAALWPALGPG*GWSQHA
Trigger: GGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGC...AGGCCAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp GCGGCCTTGTGCGTCCAGCCTCTTGTCAGCATAGACCTTGTAGGTGAAGGCGTGGCATTGGGGCCTGGGTaGGGCTGGTCCCAGCATGCC +
Preference number: 4 (lower is better)
Translates to: AALCVQPLVSIDLVGEGVALGPG*GWSQHA
Trigger: GGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGC...CACGCCTTCACCTACAAGGTCTATGCTGACAAGAGGCTGGACGCACAAGGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR GCA 90 bp GGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCTGGCCTGGTGCATTGGGGCCTGGGTaGGGCTGGTCCCAGCATGCC +
Preference number: 4 (lower is better)
Translates to: GPINKGGVSTVPAASWPGALGPG*GWSQHA
Trigger: GGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGC...ACCAGGCCAGGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp ACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCGAGGGGCTAGAAGGCTaGAGCCGCTGGTCCACACAC +
Preference number: 4 (lower is better)
Translates to: TAGPQLSSQVAGREPVHSEGLEG*SRWSTH
Trigger: GTGTGTGGACCAGCGGCTGCAGCCTTCTAGCCCCTC...GGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp GGGTCCCTCTCCCTTACCCTACCAGCTTCTCCAGGTGACTGCAGCCCAAACCCAGGGGGAGCCACGGCTTaGCGACCTCAGCCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: GSLSLTLPASPGDCSPNPGGATA*RPQPES
Trigger: ACTCTCAGGCTGAGGTCGGCAAGCCGTGGCTCCCCC...TGGGTTTGGGCTGCAGTCACCTGGAGAAGCTGGTAGGGTAAGGGAGAGGGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp CCACAGAGCGCCCACATCCCCACTCCTGCCCGGGGTGAGGTGAATCTAGCACTGGGTCAGACAGGGTATTaGACGGTGTGTGGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PQSAHIPTPARGEVNLALGQTGY*TVCGGA
Trigger: GGCTCCCCCACACACCGTGCAATACCCTGTCTGACC...CAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGGGATGTGGGCGCTCTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp CCACAGAGCGCCCACATCCCCACTCCTGCCCGGGGTGAGGTGAATCTAGCACTGCTTCAACAGAAGCGGTaGCCAGGGGCCCTGAATGCC +
Preference number: 4 (lower is better)
Translates to: PQSAHIPTPARGEVNLALLQQKR*PGALNA
Trigger: GGCATTCAGGGCCCCTGGGCACCGCTTCTGTTGAAG...CAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGGGATGTGGGCGCTCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp GACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCGGGCCCAGAAGCCCCTaGTTCAACAGAAGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: DGWAPTLLTGGREGTCSFGPRSP*FNRSGA
Trigger: GGCACCGCTTCTGTTGAAGCAGGGGCTTCTGGGCCC...GAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp ACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCGTCTCCCTGCCGGACTaGCTTCCCCCAGAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: TAGPQLSSQVAGREPVHSVSLPD*LPPEAG
Trigger: ACCAGCTTCTGGGGGAAGGCAGTCCGGCAGGGAGAC...GGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AGAGGATGCGCACGATGTAGCGCTGCTCGTTGGGGCAGCTGTAGCAGCGCAGGTGTCTCCCTGCCGGACTaGCTTCCCCCAGAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RGCARCSAARWGSCSSAGVSLPD*LPPEAG
Trigger: ACCAGCTTCTGGGGGAAGGCAGTCCGGCAGGGAGAC...ACCTGCGCTGCTACAGCTGCCCCAACGAGCAGCGCTACATCGTGCGCATCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR GCA 90 bp CTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTCTCTGGGCCCAGCACTaGAGGATCCTGCGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: LKAHGRAWLSPVPLEVTCLWAQH*RILRVP
Trigger: TGGCACTCGCAGGATCCTGCAGTGCTGGGCCCAGAG...ACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp ACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCCTCTGGGCCCAGCACTaGAGGATCCTGCGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: TAGPQLSSQVAGREPVHSLWAQH*RILRVP
Trigger: TGGCACTCGCAGGATCCTGCAGTGCTGGGCCCAGAG...GGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp CTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTAGTATAAGCCCAGCCTaGTGGGGGTTCCGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LKAHGRAWLSPVPLEVTCSISPA*WGFRRP
Trigger: GGGCCTCCGGAACCCCCAGCAGGCTGGGCTTATACT...ACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp GGTGGTGAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTGCTTCTCCAGGTGACTaGAGCCCAAACCCAGGGATA +
Preference number: 4 (lower is better)
Translates to: GGEAGGGAQPDRGYGASTASPGD*SPNPGI
Trigger: TATCCCTGGGTTTGGGCTGCAGTCACCTGGAGAAGC...AGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTCACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTGAGTTACACTCCAGGAGCTaGCCCCGCCACGTTGGCGTG +
Preference number: 4 (lower is better)
Translates to: KAHGRAWLSPVPLEVTCELHSRS*PRHVGV
Trigger: CACGCCAACGTGGCGGGGGCAGCTCCTGGAGTGTAA...CTCACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361684.8
CDS-3UTR CCA 90 bp GGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCACGAAGAAGCCAGAGATaGCCTGAGCGGCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: GGGAQPDRGYGASTSATARRSQR*PERQLS
Trigger: TGACAACTGCCGCTCAGGCCATCTCTGGCTTCTTCG...TGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp ACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACGGCTGACCGCCATGAGTaGCTTCACCACACAGAACTG +
Preference number: 4 (lower is better)
Translates to: TSIGAWVRLVPACPQHRTADRHE*LHHTEL
Trigger: CAGTTCTGTGTGGTGAAGCCACTCATGGCGGTCAGC...CGTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp CAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCATCCACACACAAGCATTaGGGCCTGGGTGCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: QAGRAQVRQGIARCVGEPSTHKH*GLGAAG
Trigger: ACCAGCCGCACCCAGGCCCCAATGCTTGTGTGTGGA...TGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp TTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACAGTATTGCACGGTGTGTaGGGGAGCCACGGCTTGCCG +
Preference number: 4 (lower is better)
Translates to: FLKAHGRAWLSPVPLEVTVLHGV*GSHGLP
Trigger: CGGCAAGCCGTGGCTCCCCCACACACCGTGCAATAC...TGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACCCTTCCCCCAGAAGCTaGTCTGAAACGTGGAGACTC +
Preference number: 4 (lower is better)
Translates to: HKHWGLGAAGPSMPPAQDPSPRS*SETWRL
Trigger: GAGTCTCCACGTTTCAGACCAGCTTCTGGGGGAAGG...GTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCTGGCCTGGTGCCCCAGGGAGCGTGTaGGACAGATGGGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GPINKGGVSTVPAASWPGAPGSV*DRWGAR
Trigger: CCTGGCTCCCCATCTGTCCCACACGCTCCCTGGGGC...ACCAGGCCAGGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CCCACTCCTGCCCGGGGTGAGGTGAATCTAGCACTGGACAAAGGTGGACAGGGGCCTGTCCAAGGGCTCTaGGCCCAGCACTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: PTPARGEVNLALDKGGQGPVQGL*AQHCRI
Trigger: GATCCTGCAGTGCTGGGCCCAGAGCCCTTGGACAGG...CCCCTGTCCACCTTTGTCCAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CCCACTCCTGCCCGGGGTGAGGTGAATCTAGCACTGGACAAAGGTGGACAGGGGATGGAGGGGGAGAGCTaGCCTCTGGCACCCACATGC +
Preference number: 4 (lower is better)
Translates to: PTPARGEVNLALDKGGQGMEGES*PLAPTC
Trigger: GCATGTGGGTGCCAGAGGCCAGCTCTCCCCCTCCAT...CCCCTGTCCACCTTTGTCCAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp AGAGGATGCGCACGATGTAGCGCTGCTCGTTGGGGCAGCTGTAGCAGCGCAGGTATGGAGGGGGAGAGCTaGCCTCTGGCACCCACATGC +
Preference number: 4 (lower is better)
Translates to: RGCARCSAARWGSCSSAGMEGES*PLAPTC
Trigger: GCATGTGGGTGCCAGAGGCCAGCTCTCCCCCTCCAT...ACCTGCGCTGCTACAGCTGCCCCAACGAGCAGCGCTACATCGTGCGCATCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR CCA 90 bp CATGTAGATCACAGTCCTCAGTCCAGGCAGCCCCTGGGTGTCTCGTCCCAGCTCCGAGCCCTGGGCTGGTaGCATGTGATGAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: HVDHSPQSRQPLGVSSQLRALGW*HVMSRA
Trigger: GGCCCTGCTCATCACATGCCACCAGCCCAGGGCTCG...GAGCTGGGACGAGACACCCAGGGGCTGCCTGGACTGAGGACTGTGATCTACATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411679.2
CDS-3UTR CCA 90 bp TGCAGGATCCTGCGAGTGCCAGCAGCTGAACTAAGAGCCCCAGGGAGCGTGTGGAGCCGAGCCCTGGGCTaGTGGCATGTGATGAGCAGG +
Preference number: 4 (lower is better)
Translates to: CRILRVPAAELRAPGSVWSRALG*WHVMSR
Trigger: CCTGCTCATCACATGCCACCAGCCCAGGGCTCGGCT...CCACACGCTCCCTGGGGCTCTTAGTTCAGCTGCTGGCACTCGCAGGATCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR TCA 90 bp AAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACGGGCGGAGATGTTGTAGATaGTGGTCACGTAGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: KHWGLGAAGPSMPPAQDGRRCCR*WSRRGS
Trigger: GCTACCTCTACGTGACCATCATCTACAACATCTCCG...CCCGTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR TCA 90 bp AACAGCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGTGTCGCGGGCGCCACTaGGGCTGTGGGAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: NSNAGQAKTKGVGISSTLCRGRH*GCGSGR
Trigger: TCTCCCGCTCCCACAGCCTCAGTGGCGCCCGCGACA...CAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp GCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGAGGTGGGGCACAGCCTaGCCGTGGCTATGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: AVQAGPCINIPEGPWASLRWGTA*PWLWRQ
Trigger: CTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCT...CAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR TCA 90 bp TGCAGGATCCTGCGAGTGCCAGCAGCTGAACTAAGAGCCCCAGGGAGCGTGTGGCACTCCTGCCCGGGGTaGGGTGAATCTAGCACTGGA +
Preference number: 4 (lower is better)
Translates to: CRILRVPAAELRAPGSVWHSCPG*GESSTG
Trigger: TCCAGTGCTAGATTCACCTCACCCCGGGCAGGAGTG...CCACACGCTCCCTGGGGCTCTTAGTTCAGCTGCTGGCACTCGCAGGATCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp CCCACTCCTGCCCGGGGTGAGGTGAATCTAGCACTGGACAAAGGTGGACAGGGGCACTCCTGCCCGGGGTaGGGTGAATCTAGCACTGGA +
Preference number: 4 (lower is better)
Translates to: PTPARGEVNLALDKGGQGHSCPG*GESSTG
Trigger: TCCAGTGCTAGATTCACCTCACCCCGGGCAGGAGTG...CCCCTGTCCACCTTTGTCCAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp GGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCAGCTCAGACCTTTCCCCTaGAACGGGAGGGAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GWAPTLLTGGREGTCSFQLRPFP*NGREKP
Trigger: GGGCTTCTCCCTCCCGTTTCAGGGGAAAGGTCTGAG...CTGGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp GGGTCCCTCTCCCTTACCCTACCAGCTTCTCCAGGTGACTGCAGCCCAAACCCAGCGAGTGCCAGCAGCTaGACTAAGAGCCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GSLSLTLPASPGDCSPNPASASS*TKSPRE
Trigger: CTCCCTGGGGCTCTTAGTTCAGCTGCTGGCACTCGC...TGGGTTTGGGCTGCAGTCACCTGGAGAAGCTGGTAGGGTAAGGGAGAGGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp CTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTGGAGAGACAGCTTGGTaGAAGCAGATGGCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LKAHGRAWLSPVPLEVTCGETAW*KQMAGQ
Trigger: CTGCCCCGCCATCTGCTTTCACCAAGCTGTCTCTCC...ACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp TTATGCATCCTAAGGAGGAGGAGGGGATGGAGCGGTCGGGCACATGTTCCCGTCGACCCCACGGACCGCTaGTTCCCTGCCACTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LCILRRRRGWSGRAHVPVDPTDR*FPATEL
Trigger: GAGCTCAGTGGCAGGGAATCAGCGGTCCGTGGGGTC...GACGGGAACATGTGCCCGACCGCTCCATCCCCTCCTCCTCCTTAGGATGCATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp GGATGGAGCGGTCGGGCACATGTTCCCGTCCCCACGACCCCACGGACCGCTGATGCAGGGTGGCCTGTTTaGAGAACCTCAGAAATCCGA +
Preference number: 4 (lower is better)
Translates to: GWSGRAHVPVPTTPRTADAGWPV*RTSEIR
Trigger: TCGGATTTCTGAGGTTCTGCAAACAGGCCACCCTGC...ATCAGCGGTCCGTGGGGTCGTGGGGACGGGAACATGTGCCCGACCGCTCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp GGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCAGCAGGGTGGCCTGTTTaGAGAACCTCAGAAATCCGA +
Preference number: 4 (lower is better)
Translates to: GGGAQPDRGYGASTSATAAGWPV*RTSEIR
Trigger: TCGGATTTCTGAGGTTCTGCAAACAGGCCACCCTGC...TGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp AGTGTTTCTGGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCAGCCGGCAGCCACGGTaGCCTCGCCCACCGACACGC +
Preference number: 4 (lower is better)
Translates to: SVSGPINKGGVSTVPAASSRQPR*PRPPTR
Trigger: GCGTGTCGGTGGGCGAGGGCACCGTGGCTGCCGGCT...GGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACCAGAAACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp AAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTGAGCTTCAACAGAAGCGGTaGCCAGGGGCCCTGAATGCC +
Preference number: 4 (lower is better)
Translates to: KAHGRAWLSPVPLEVTCELQQKR*PGALNA
Trigger: GGCATTCAGGGCCCCTGGGCACCGCTTCTGTTGAAG...CTCACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCAAGGAAGCAAGGGCTCTaGCCAAAGCTATCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RLEVGHSLTVAMAPALPPRKQGL*PKLSRK
Trigger: CTTCCTCGATAGCTTTGGGCAGAGCCCTTGCTTCCT...TGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp CACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACGTATGTTGGCACTTGTaGGTCCAGCCTCTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: HKHWGLGAAGPSMPPAQDVCWHL*VQPLVS
Trigger: GCTGACAAGAGGCTGGACGCACAAGTGCCAACATAC...GTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633438.1
CDS-3UTR CCA 90 bp CACTTCCGCCACTGCAGCCCGCACCTAGAATTCATCATCAGAGCTGAGCAGGAGAGGAGCCCATGGCGGTaGCGGCGTCTGCGGACGATG +
Preference number: 4 (lower is better)
Translates to: HFRHCSPHLEFIIRAEQERSPWR*RRLRTM
Trigger: CATCGTCCGCAGACGCCGCCACCGCCATGGGCTCCT...CTCCTGCTCAGCTCTGATGATGAATTCTAGGTGCGGGCTGCAGTGGCGGAAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR CCA 90 bp GCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGGATCACGGAGACGCTaGGCGAGGCTGCTGCGGTCG +
Preference number: 4 (lower is better)
Translates to: AVQAGPCINIPEGPWASLGSRRR*ARLLRS
Trigger: CGACCGCAGCAGCCTCGCCCAGCGTCTCCGTGATCC...CAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CACGATGAAGAGGATGCGCACGATGTAGCGCTGCTCGTTGGGGCAGCTGTAGCAGCTGCTCCATGGCAGTaGGGCTGCCCTCGGGGATCA +
Preference number: 4 (lower is better)
Translates to: HDEEDAHDVALLVGAAVAAAPWQ*GCPRGS
Trigger: TGATCCCCGAGGGCAGCCCCACTGCCATGGAGCAGC...TGCTACAGCTGCCCCAACGAGCAGCGCTACATCGTGCGCATCCTCTTCATCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411679.2
ENST00000436674.5
CDS-3UTR CCA 90 bp AGAGGATGCGCACGATGTAGCGCTGCTCGTTGGGGCAGCTGTAGCAGCGCAGGTTGTAGCGCTGCTCGTTaGGGCAGCTGTAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: RGCARCSAARWGSCSSAGCSAAR*GSCSSA
Trigger: TGCGCTGCTACAGCTGCCCCAACGAGCAGCGCTACA...ACCTGCGCTGCTACAGCTGCCCCAACGAGCAGCGCTACATCGTGCGCATCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411679.2
ENST00000436674.5
CDS-3UTR CCA 90 bp GGTGGTGAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTCACAGAACTGCAGGGTaGCCTGTTTGCAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: GGEAGGGAQPDRGYGASTHRTAG*PVCRTS
Trigger: TGAGGTTCTGCAAACAGGCCACCCTGCAGTTCTGTG...AGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTCACCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp GGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCACACAGAACTGCAGGGTaGCCTGTTTGCAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: GGGAQPDRGYGASTSATAHRTAG*PVCRTS
Trigger: TGAGGTTCTGCAAACAGGCCACCCTGCAGTTCTGTG...TGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp CCACAGAGCGCCCACATCCCCACTCCTGCCCGGGGTGAGGTGAATCTAGCACTGTACTTGCCGAAGGCCTaGAGGACCACAGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: PQSAHIPTPARGEVNLALYLPKA*RTTVLT
Trigger: GGTCAGCACTGTGGTCCTCCAGGCCTTCGGCAAGTA...CAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGGGATGTGGGCGCTCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp AGTGTTTCTGGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCGAGCGGGAGAGGCCGTaGGCGCCACCACGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SVSGPINKGGVSTVPAASERERP*APPRQV
Trigger: CACCTGGCGTGGTGGCGCCCACGGCCTCTCCCGCTC...GGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACCAGAAACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp GCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGCCCATGGGCGAGCCTaGCTGTCCCCCGTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: AVQAGPCINIPEGPWASLAHGRA*LSPVPL
Trigger: CAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGC...CAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp ACTGGTGACGTCAAAGTCCCCATCCCGGTACTTGCCGAAGGCCTGGAGGACCACATTCCTGAAGGCCCATaGGCGAGCCTGGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: TGDVKVPIPVLAEGLEDHIPEGP*ASLAVP
Trigger: GGGGACAGCCAGGCTCGCCCATGGGCCTTCAGGAAT...GTGGTCCTCCAGGCCTTCGGCAAGTACCGGGATGGGGACTTTGACGTCACCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR CCA 90 bp TGCAGGATCCTGCGAGTGCCAGCAGCTGAACTAAGAGCCCCAGGGAGCGTGTGGTCCACACACAAGCATTaGGGCCTGGGTGCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: CRILRVPAAELRAPGSVWSTHKH*GLGAAG
Trigger: ACCAGCCGCACCCAGGCCCCAATGCTTGTGTGTGGA...CCACACGCTCCCTGGGGCTCTTAGTTCAGCTGCTGGCACTCGCAGGATCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTAGGCAGGCAGAGGTGTaGCCACGACAGGTGGGGATA +
Preference number: 4 (lower is better)
Translates to: LKAHGRAWLSPVPLEVTCRQAEV*PRQVGI
Trigger: TATCCCCACCTGTCGTGGCCACACCTCTGCCTGCCT...ACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCTGGCCTGGTCCTGGGAAGGAGGGCTaGGAGCCCCTGAGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: GPINKGGVSTVPAASWPGPGKEG*EPLSPE
Trigger: TTCAGGGCTCAGGGGCTCCCAGCCCTCCTTCCCAGG...ACCAGGCCAGGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp AGGCCAGGAAGACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACAACTCTCCTCACAGGTaGCAGGGAGGGAACCTGTTC +
Preference number: 4 (lower is better)
Translates to: RPGRRLGPNSPHRWQGGNNSPHR*QGGNLF
Trigger: GAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTT...GTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGTCTTCCTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GCGGCCTTGTGCGTCCAGCCTCTTGTCAGCATAGACCTTGTAGGTGAAGGCGTGCGAGCCCTGGGCTGGTaGCATGTGATGAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: AALCVQPLVSIDLVGEGVRALGW*HVMSRA
Trigger: GGCCCTGCTCATCACATGCCACCAGCCCAGGGCTCG...CACGCCTTCACCTACAAGGTCTATGCTGACAAGAGGCTGGACGCACAAGGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR CCA 90 bp AGATCACAGTCCTCAGTCCAGGCAGCCCCTGGGTGTCTCGTCCCAGCTCTCATGAGCCGAGCCCTGGGCTaGTGGCATGTGATGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RSQSSVQAAPGCLVPALMSRALG*WHVMSR
Trigger: CCTGCTCATCACATGCCACCAGCCCAGGGCTCGGCT...CATGAGAGCTGGGACGAGACACCCAGGGGCTGCCTGGACTGAGGACTGTGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411679.2
CDS-3UTR CCA 90 bp AGATCACAGTCCTCAGTCCAGGCAGCCCCTGGGTGTCTCGTCCCAGCTCTCATGAGTCCAGGCAGCCCCTaGGTGTCTCGTCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RSQSSVQAAPGCLVPALMSPGSP*VSRPSS
Trigger: AGAGCTGGGACGAGACACCCAGGGGCTGCCTGGACT...CATGAGAGCTGGGACGAGACACCCAGGGGCTGCCTGGACTGAGGACTGTGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411679.2
CDS-3UTR TCA 90 bp ACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACGAACCTTTGCAGAAAGTaGCAAGCTAGCCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TSIGAWVRLVPACPQHRTNLCRK*QASLRS
Trigger: GCTCCTGAGGCTAGCTTGTCACTTTCTGCAAAGGTT...CGTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp CAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCACAGCAGGAGGCTCCCTaGGGGAAACCTTTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: QAGRAQVRQGIARCVGEPQQEAP*GKPLQK
Trigger: TTTCTGCAAAGGTTTCCCTCAGGGAGCCTCCTGCTG...TGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp TGCAGGATCCTGCGAGTGCCAGCAGCTGAACTAAGAGCCCCAGGGAGCGTGTGGAAGCCAGAGATGGCCTaGGCGGCAGTTGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: CRILRVPAAELRAPGSVWKPEMA*AAVVIR
Trigger: CCTGATGACAACTGCCGCTCAGGCCATCTCTGGCTT...CCACACGCTCCCTGGGGCTCTTAGTTCAGCTGCTGGCACTCGCAGGATCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp GCAGCGCAGGTGCATGTAGATCACAGTCCTCAGTCCAGGCAGCCCCTGGGTGTCAAGCCAGAGATGGCCTaGGCGGCAGTTGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: AAQVHVDHSPQSRQPLGVKPEMA*AAVVIR
Trigger: CCTGATGACAACTGCCGCTCAGGCCATCTCTGGCTT...GACACCCAGGGGCTGCCTGGACTGAGGACTGTGATCTACATGCACCTGCGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411679.2
CDS-3UTR TCA 90 bp GACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCAAGCCAGAGATGGCCTaGGCGGCAGTTGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: DGWAPTLLTGGREGTCSFKPEMA*AAVVIR
Trigger: CCTGATGACAACTGCCGCTCAGGCCATCTCTGGCTT...GAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp CCACAGAGCGCCCACATCCCCACTCCTGCCCGGGGTGAGGTGAATCTAGCACTGCGTAGATGGGCACGATaGAGAGGATGCGCACGATGT +
Preference number: 4 (lower is better)
Translates to: PQSAHIPTPARGEVNLALRRWAR*RGCARC
Trigger: ACATCGTGCGCATCCTCTTCATCGTGCCCATCTACG...CAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGGGATGTGGGCGCTCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp AGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACGGAGATGTTGTAGATaGTGGTCACGTAGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: RLEVGHSLTVAMAPALPPRRCCR*WSRRGS
Trigger: GCTACCTCTACGTGACCATCATCTACAACATCTCCG...TGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR TCA 90 bp GAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCATTCATCATCAGAGCTaGGCAGGAGAGTCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: EAGGGAQPDRGYGASTSAIHHQS*AGESSR
Trigger: ACGAGAAGACTCTCCTGCTCAGCTCTGATGATGAAT...GGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR TCA 90 bp CAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCTTGCCGACCTCAGCCTaGGAGTCTCGCGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: QAGPCINIPEGPWASLAVLPTSA*ESRGEE
Trigger: CTCCTCCCCGCGAGACTCTCAGGCTGAGGTCGGCAA...GACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp GCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGTTGCCGACCTCAGCCTaGGAGTCTCGCGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: AVQAGPCINIPEGPWASLLPTSA*ESRGEE
Trigger: CTCCTCCCCGCGAGACTCTCAGGCTGAGGTCGGCAA...CAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp AAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTGAGAGAAAGAATCCCCAGTaGACACCGGCAGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: KAHGRAWLSPVPLEVTCERKNPQ*TPAGSL
Trigger: GAGGGACCCTGCCGGTGTTCACTGGGGATTCTTTCT...CTCACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AGGCCAGGAAGACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACGGATGGCCAGGAGCATaGCTTGCCAGAAGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: RPGRRLGPNSPHRWQGGNGWPGA*LARRKE
Trigger: TTCTTTCCTTCTGGCAAGGCATGCTCCTGGCCATCC...GTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGTCTTCCTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp GGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCAGCCGCAGGGCCAGGGCTaGAAAGAACATCTCCACACA +
Preference number: 4 (lower is better)
Translates to: GWAPTLLTGGREGTCSFQPQGQG*KEHLHT
Trigger: TGTGTGGAGATGTTCTTTGCAGCCCTGGCCCTGCGG...CTGGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp GGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCTGGCCTGGTGGCACAGCGGCCTTGTaGGTCCAGCCTCTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: GPINKGGVSTVPAASWPGGTAAL*VQPLVS
Trigger: GCTGACAAGAGGCTGGACGCACAAGGCCGCTGTGCC...ACCAGGCCAGGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp CTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTCAGCACTTCCGCCACTaGAGCCCGCACCTAGAATTC +
Preference number: 4 (lower is better)
Translates to: LKAHGRAWLSPVPLEVTCQHFRH*SPHLEF
Trigger: GAATTCTAGGTGCGGGCTGCAGTGGCGGAAGTGCTG...ACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp AACAGCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGCCCAGGGGCCCTGAATaGCCTTCCTGGGTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: NSNAGQAKTKGVGISSTLPRGPE*PSWVGP
Trigger: AGGCCCCACCCAGGAAGGGCATTCAGGGCCCCTGGG...CAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AGTGTTTCTGGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCCCCTCCCGGTCTCCCTaGCGGACTGCCTTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: SVSGPINKGGVSTVPAASPSRSP*RTAFPQ
Trigger: CTGGGGGAAGGCAGTCCGGCAGGGAGACCGGGAGGG...GGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACCAGAAACACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp GGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCTGGCCTGGTCCTCTGGCACCCACATaGAGGCCTCTGCCACGAGGA +
Preference number: 4 (lower is better)
Translates to: GPINKGGVSTVPAASWPGPLAPT*RPLPRG
Trigger: TCCTCGTGGCAGAGGCCTGCATGTGGGTGCCAGAGG...ACCAGGCCAGGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp AACAGCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGGGATCACGGAGACGCTaGGCGAGGCTGCTGCGGTCG +
Preference number: 4 (lower is better)
Translates to: NSNAGQAKTKGVGISSTLGSRRR*ARLLRS
Trigger: CGACCGCAGCAGCCTCGCCCAGCGTCTCCGTGATCC...CAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGGTCCCTCTCCCTTACCCTACCAGCTTCTCCAGGTGACTGCAGCCCAAACCCATGTAGCGCTGCTCGTTaGGGCAGCTGTAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: GSLSLTLPASPGDCSPNPCSAAR*GSCSSA
Trigger: TGCGCTGCTACAGCTGCCCCAACGAGCAGCGCTACA...TGGGTTTGGGCTGCAGTCACCTGGAGAAGCTGGTAGGGTAAGGGAGAGGGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CCCACTCCTGCCCGGGGTGAGGTGAATCTAGCACTGGACAAAGGTGGACAGGGGTACTTGCCGAAGGCCTaGAGGACCACAGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: PTPARGEVNLALDKGGQGYLPKA*RTTVLT
Trigger: GGTCAGCACTGTGGTCCTCCAGGCCTTCGGCAAGTA...CCCCTGTCCACCTTTGTCCAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTTACTTGCCGAAGGCCTaGAGGACCACAGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: LKAHGRAWLSPVPLEVTCYLPKA*RTTVLT
Trigger: GGTCAGCACTGTGGTCCTCCAGGCCTTCGGCAAGTA...ACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp TGCAGGATCCTGCGAGTGCCAGCAGCTGAACTAAGAGCCCCAGGGAGCGTGTGGCACACTTCTCCAGGATaGCCAGGAGCATGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: CRILRVPAAELRAPGSVWHTSPG*PGACLA
Trigger: GGCAAGGCATGCTCCTGGCCATCCTGGAGAAGTGTG...CCACACGCTCCCTGGGGCTCTTAGTTCAGCTGCTGGCACTCGCAGGATCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTGGGCCGAGTGGATTTTaGGGATGGCCCCACACTTCT +
Preference number: 4 (lower is better)
Translates to: LKAHGRAWLSPVPLEVTCGPSGF*GWPHTS
Trigger: AGAAGTGTGGGGCCATCCCCAAAATCCACTCGGCCC...ACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp CGGGCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCATTCCTGAAGGCCCATaGGCGAGCCTGGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RAVQAGPCINIPEGPWASIPEGP*ASLAVP
Trigger: GGGGACAGCCAGGCTCGCCCATGGGCCTTCAGGAAT...GCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp TTATGCATCCTAAGGAGGAGGAGGGGATGGAGCGGTCGGGCACATGTTCCCGTCACAAGCATTGGGGCCTaGGTGCGGCTGGTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LCILRRRRGWSGRAHVPVTSIGA*VRLVPA
Trigger: TGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGT...GACGGGAACATGTGCCCGACCGCTCCATCCCCTCCTCCTCCTTAGGATGCATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCGGGGCCTGTGACTCCTaGTGTCTGGCTCTGATCCTT +
Preference number: 4 (lower is better)
Translates to: DGWAPTLLTGGREGTCSFGACDS*CLALIL
Trigger: AAGGATCAGAGCCAGACACCAGGAGTCACAGGCCCC...GAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGTGTGGCCACGACAGGTaGGGATACCCAGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: AVQAGPCINIPEGPWASLCGHDR*GYPGAQ
Trigger: CTGGGCCCCTGGGTATCCCCACCTGTCGTGGCCACA...CAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGGCCTCCAGGTCTAGAGGTGTaGAGGGGGAGAGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: ATLGRRKPREWESAALWPPGLEV*RGRGGA
Trigger: AGCCCCTCCTCTCCCCCTCCACACCTCTAGACCTGG...AGGCCAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCATAAGCCCAGCCTGCTaGGGGTTCCGGAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: QAGPCINIPEGPWASLAVISPAC*GFRRPQ
Trigger: CTGGGGCCTCCGGAACCCCCAGCAGGCTGGGCTTAT...GACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCTGGCCTGGTATGGAGGGGGAGAGCTaGCCTCTGGCACCCACATGC +
Preference number: 4 (lower is better)
Translates to: GPINKGGVSTVPAASWPGMEGES*PLAPTC
Trigger: GCATGTGGGTGCCAGAGGCCAGCTCTCCCCCTCCAT...ACCAGGCCAGGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGATGGAGCGGTCGGGCACATGTTCCCGTCCCCACGACCCCACGGACCGCTGATCGAAAACCAAGGGAGTaGGAATCAGCAGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: GWSGRAHVPVPTTPRTADRKPRE*ESAALW
Trigger: CCAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCG...ATCAGCGGTCCGTGGGGTCGTGGGGACGGGAACATGTGCCCGACCGCTCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACCGAAAACCAAGGGAGTaGGAATCAGCAGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: HKHWGLGAAGPSMPPAQDRKPRE*ESAALW
Trigger: CCAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCG...GTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGGTCCCTCTCCCTTACCCTACCAGCTTCTCCAGGTGACTGCAGCCCAAACCCAAGGAGGAGGAGGGGATaGAGCGGTCGGGCACATGTT +
Preference number: 4 (lower is better)
Translates to: GSLSLTLPASPGDCSPNPRRRRG*SGRAHV
Trigger: AACATGTGCCCGACCGCTCCATCCCCTCCTCCTCCT...TGGGTTTGGGCTGCAGTCACCTGGAGAAGCTGGTAGGGTAAGGGAGAGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp TGCAGGATCCTGCGAGTGCCAGCAGCTGAACTAAGAGCCCCAGGGAGCGTGTGGGGTTCATGGTCTCCTTaGGGCTGCTGGAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: CRILRVPAAELRAPGSVWGSWSP*GCWRCS
Trigger: AGAGCATCTCCAGCAGCCTCAAGGAGACCATGAACC...CCACACGCTCCCTGGGGCTCTTAGTTCAGCTGCTGGCACTCGCAGGATCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp AGTGTTTCTGGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCAGGTGGGGCACAGCCTaGCCGTGGCTATGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: SVSGPINKGGVSTVPAASRWGTA*PWLWRQ
Trigger: CTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCT...GGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACCAGAAACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR TCA 90 bp GGTGGTGAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTATGTATAAATATTCCTaGAGGCCCATGGGCGAGCCT +
Preference number: 4 (lower is better)
Translates to: GGEAGGGAQPDRGYGASTMYKYS*RPMGEP
Trigger: AGGCTCGCCCATGGGCCTTCAGGAATATTTATACAT...AGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR TCA 90 bp GCCGCTGGTCCACACACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCGGGCGCTTTCATATGTaGCTAAGGCACAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: AAGPHTSIGAWVRLVPACGRFHM*LRHRRD
Trigger: ATCTCTTCTGTGCCTTAGTCACATATGAAAGCGCCC...GCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTGTGTGGACCAGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp CCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCGGTCCTGACCACTCCTaGGGCCTGTCCAAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PCINIPEGPWASLAVPRSGPDHS*GLSKGS
Trigger: AGAGCCCTTGGACAGGCCTCAGGAGTGGTCAGGACC...GGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp GCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGGTCCTGACCACTCCTaGGGCCTGTCCAAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: AVQAGPCINIPEGPWASLGPDHS*GLSKGS
Trigger: AGAGCCCTTGGACAGGCCTCAGGAGTGGTCAGGACC...CAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp ACTGGTGACGTCAAAGTCCCCATCCCGGTACTTGCCGAAGGCCTGGAGGACCACAGAAAGAATCCCCAGTaGACACCGGCAGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: TGDVKVPIPVLAEGLEDHRKNPQ*TPAGSL
Trigger: GAGGGACCCTGCCGGTGTTCACTGGGGATTCTTTCT...GTGGTCCTCCAGGCCTTCGGCAAGTACCGGGATGGGGACTTTGACGTCACCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR GCA 90 bp GCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGCCCTCACTGTCATGGTaGCTGGCAGCAGGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: AVQAGPCINIPEGPWASLPSLSW*LAAGGS
Trigger: GGAGCCTCCTGCTGCCAGGCACCATGACAGTGAGGG...CAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp CCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCCCCCATCCCGGTACTTaGCGAAGGCCTGGAGGACCA +
Preference number: 4 (lower is better)
Translates to: PCINIPEGPWASLAVPRSPHPGT*RRPGGP
Trigger: TGGTCCTCCAGGCCTTCGGCAAGTACCGGGATGGGG...GGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp GCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGCCCCATCCCGGTACTTaGCGAAGGCCTGGAGGACCA +
Preference number: 4 (lower is better)
Translates to: AVQAGPCINIPEGPWASLPHPGT*RRPGGP
Trigger: TGGTCCTCCAGGCCTTCGGCAAGTACCGGGATGGGG...CAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp GCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGGCACAGCGGCCTTGTaGGTCCAGCCTCTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: AVQAGPCINIPEGPWASLGTAAL*VQPLVS
Trigger: GCTGACAAGAGGCTGGACGCACAAGGCCGCTGTGCC...CAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp GGGTCCCTCTCCCTTACCCTACCAGCTTCTCCAGGTGACTGCAGCCCAAACCCAAGCACTGCAGGATCCTaGGAGTGCCAGCAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: GSLSLTLPASPGDCSPNPSTAGS*ECQQLN
Trigger: GTTCAGCTGCTGGCACTCGCAGGATCCTGCAGTGCT...TGGGTTTGGGCTGCAGTCACCTGGAGAAGCTGGTAGGGTAAGGGAGAGGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp ATGCAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCGAAGAAGCCAGAGATaGCCTGAGCGGCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: MQAGRAQVRQGIARCVGERRSQR*PERQLS
Trigger: TGACAACTGCCGCTCAGGCCATCTCTGGCTTCTTCG...CTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GCGCAGGTGCATGTAGATCACAGTCCTCAGTCCAGGCAGCCCCTGGGTGTCTCGCGAAGAAGCCAGAGATaGCCTGAGCGGCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: AQVHVDHSPQSRQPLGVSRRSQR*PERQLS
Trigger: TGACAACTGCCGCTCAGGCCATCTCTGGCTTCTTCG...CGAGACACCCAGGGGCTGCCTGGACTGAGGACTGTGATCTACATGCACCTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411679.2
CDS-3UTR CCA 90 bp GCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGGCCTTGTAGCGCTGCTCGTTaGGGCAGCTGTAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: ATLGRRKPREWESAALWPCSAAR*GSCSSA
Trigger: TGCGCTGCTACAGCTGCCCCAACGAGCAGCGCTACA...AGGCCAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CGGGCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCTGTAGCGCTGCTCGTTaGGGCAGCTGTAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: RAVQAGPCINIPEGPWASCSAAR*GSCSSA
Trigger: TGCGCTGCTACAGCTGCCCCAACGAGCAGCGCTACA...GCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp AAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACGGGTGCCATACATACAGCTaGACTCAATGGGTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: KHWGLGAAGPSMPPAQDGCHTYS*TQWVFL
Trigger: GAGGAAAACCCATTGAGTCCAGCTGTATGTATGGCA...CCCGTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp CCACAGAGCGCCCACATCCCCACTCCTGCCCGGGGTGAGGTGAATCTAGCACTGCCGGGCAGTGCAGGCTaGGCCATGTATAAATATTCC +
Preference number: 4 (lower is better)
Translates to: PQSAHIPTPARGEVNLALPGSAG*AMYKYS
Trigger: GGAATATTTATACATGGCCCAGCCTGCACTGCCCGG...CAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGGGATGTGGGCGCTCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCAAGCTGGTCTGAAACGTaGAGACTCAGACCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: QAGRAQVRQGIARCVGEPSWSET*RLRPFP
Trigger: GGGGAAAGGTCTGAGTCTCCACGTTTCAGACCAGCT...TGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTCCTTCCCCCAGAAGCTaGTCTGAAACGTGGAGACTC +
Preference number: 4 (lower is better)
Translates to: LKAHGRAWLSPVPLEVTCPSPRS*SETWRL
Trigger: GAGTCTCCACGTTTCAGACCAGCTTCTGGGGGAAGG...ACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp ATGCAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGAACTCTCCTCACAGGTaGCAGGGAGGGAACCTGTTC +
Preference number: 4 (lower is better)
Translates to: MQAGRAQVRQGIARCVGENSPHR*QGGNLF
Trigger: GAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTT...CTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp TTATGCATCCTAAGGAGGAGGAGGGGATGGAGCGGTCGGGCACATGTTCCCGTCAGGAGGAGGAGGGGATaGAGCGGTCGGGCACATGTT +
Preference number: 4 (lower is better)
Translates to: LCILRRRRGWSGRAHVPVRRRRG*SGRAHV
Trigger: AACATGTGCCCGACCGCTCCATCCCCTCCTCCTCCT...GACGGGAACATGTGCCCGACCGCTCCATCCCCTCCTCCTCCTTAGGATGCATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
3UTR CAA 72 bp AATTCATCATCAGAGCTGAGCAGGAGAGTCTTCTCGTaGTCGCGGGCGCCACTGAGGCTGTGGGAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: NSSSELSRRVFS*SRAPLRLWERE
Trigger: CTCCCGCTCCCACAGCCTCAGTGGCGCCCGCGACAACGAGAAGACTCTCCTGCTCAGCTCTGATGATGAATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR TCA 90 bp AGCAGCGCAGGTGCATGTAGATCACAGTCCTCAGTCCAGGCAGCCCCTGGGTGTCGTAGATGGGCACGATaGAGAGGATGCGCACGATGT +
Preference number: 4 (lower is better)
Translates to: SSAGACRSQSSVQAAPGCRRWAR*RGCARC
Trigger: ACATCGTGCGCATCCTCTTCATCGTGCCCATCTACG...ACACCCAGGGGCTGCCTGGACTGAGGACTGTGATCTACATGCACCTGCGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411679.2
CDS-3UTR TCA 90 bp GGGTCCCTCTCCCTTACCCTACCAGCTTCTCCAGGTGACTGCAGCCCAAACCCACGTAGATGGGCACGATaGAGAGGATGCGCACGATGT +
Preference number: 4 (lower is better)
Translates to: GSLSLTLPASPGDCSPNPRRWAR*RGCARC
Trigger: ACATCGTGCGCATCCTCTTCATCGTGCCCATCTACG...TGGGTTTGGGCTGCAGTCACCTGGAGAAGCTGGTAGGGTAAGGGAGAGGGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp GTGCCATACATACAGCTGGACTCAATGGGTTTTCCTCTGATCTCCGACATGATGGCTGGGCGAGGCTGCTaGGGTCGTGGGCGACGCTGG +
Preference number: 4 (lower is better)
Translates to: VPYIQLDSMGFPLISDMMAGRGC*GRGRRW
Trigger: CCAGCGTCGCCCACGACCGCAGCAGCCTCGCCCAGC...CATCATGTCGGAGATCAGAGGAAAACCCATTGAGTCCAGCTGTATGTATGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436674.5
ENST00000457534.5
CDS-3UTR GCA 90 bp AGTGTTTCTGGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCCCATGGCAGTGGGGCTaGCCTCGGGGATCACGGAGA +
Preference number: 4 (lower is better)
Translates to: SVSGPINKGGVSTVPAASPWQWG*PRGSRR
Trigger: TCTCCGTGATCCCCGAGGGCAGCCCCACTGCCATGG...GGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACCAGAAACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp CATGTAGATCACAGTCCTCAGTCCAGGCAGCCCCTGGGTGTCTCGTCCCAGCTCAGCAGTCGCGGACGGTaGCGAAGTACACGTAGTACT +
Preference number: 4 (lower is better)
Translates to: HVDHSPQSRQPLGVSSQLSSRGR*RSTRST
Trigger: AGTACTACGTGTACTTCGGCACCGTCCGCGACTGCT...GAGCTGGGACGAGACACCCAGGGGCTGCCTGGACTGAGGACTGTGATCTACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411679.2
CDS-3UTR GCA 90 bp ACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCAGCCCGCACCTAGAATTCATAGCAGTCGCGGACGGTaGCGAAGTACACGTAGTACT +
Preference number: 4 (lower is better)
Translates to: TVAMAPALPPLQPAPRIHSSRGR*RSTRST
Trigger: AGTACTACGTGTACTTCGGCACCGTCCGCGACTGCT...ATGAATTCTAGGTGCGGGCTGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR GCA 90 bp CTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTGCAGGGTGGCCTGTTTaGAGAACCTCAGAAATCCGA +
Preference number: 4 (lower is better)
Translates to: LKAHGRAWLSPVPLEVTCAGWPV*RTSEIR
Trigger: TCGGATTTCTGAGGTTCTGCAAACAGGCCACCCTGC...ACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp TGCAGGATCCTGCGAGTGCCAGCAGCTGAACTAAGAGCCCCAGGGAGCGTGTGGTTCACCACACAGAACTaGAGGGTGGCCTGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: CRILRVPAAELRAPGSVWFTTQN*RVACLQ
Trigger: CTGCAAACAGGCCACCCTGCAGTTCTGTGTGGTGAA...CCACACGCTCCCTGGGGCTCTTAGTTCAGCTGCTGGCACTCGCAGGATCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp GGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCAGGGATGGCCAGGAGCATaGCTTGCCAGAAGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: GWAPTLLTGGREGTCSFQGWPGA*LARRKE
Trigger: TTCTTTCCTTCTGGCAAGGCATGCTCCTGGCCATCC...CTGGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp TTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACAGGATGGCCAGGAGCATaGCTTGCCAGAAGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: FLKAHGRAWLSPVPLEVTGWPGA*LARRKE
Trigger: TTCTTTCCTTCTGGCAAGGCATGCTCCTGGCCATCC...TGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp AAGCAAGGGCTCTGCCCAAAGCTATCGAGGAAGGACCCAAGTGAGCCGGCAGTGCCGCAGGGCCAGGGCTaGAAAGAACATCTCCACACA +
Preference number: 4 (lower is better)
Translates to: KQGLCPKLSRKDPSEPAVPQGQG*KEHLHT
Trigger: TGTGTGGAGATGTTCTTTGCAGCCCTGGCCCTGCGG...CACTGCCGGCTCACTTGGGTCCTTCCTCGATAGCTTTGGGCAGAGCCCTTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp CAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCGGTCAGACAGGGTATTaGACGGTGTGTGGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: QAGPCINIPEGPWASLAVGQTGY*TVCGGA
Trigger: GGCTCCCCCACACACCGTGCAATACCCTGTCTGACC...GACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp GGGTCCCTCTCCCTTACCCTACCAGCTTCTCCAGGTGACTGCAGCCCAAACCCATCTGGCTCTGATCCTTaGAGCATGCCACAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GSLSLTLPASPGDCSPNPSGSDP*SMPQRP
Trigger: AGGCCTCTGTGGCATGCTGCAAGGATCAGAGCCAGA...TGGGTTTGGGCTGCAGTCACCTGGAGAAGCTGGTAGGGTAAGGGAGAGGGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp TGCAGGATCCTGCGAGTGCCAGCAGCTGAACTAAGAGCCCCAGGGAGCGTGTGGAGGAAGCAAGGGCTCTaGCCAAAGCTATCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: CRILRVPAAELRAPGSVWRKQGL*PKLSRK
Trigger: CTTCCTCGATAGCTTTGGGCAGAGCCCTTGCTTCCT...CCACACGCTCCCTGGGGCTCTTAGTTCAGCTGCTGGCACTCGCAGGATCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AACAGCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGGTCTCCCTGCCGGACTaGCTTCCCCCAGAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: NSNAGQAKTKGVGISSTLVSLPD*LPPEAG
Trigger: ACCAGCTTCTGGGGGAAGGCAGTCCGGCAGGGAGAC...CAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp CGGGCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCAGCACTGCAGGATCCTaGGAGTGCCAGCAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: RAVQAGPCINIPEGPWASSTAGS*ECQQLN
Trigger: GTTCAGCTGCTGGCACTCGCAGGATCCTGCAGTGCT...GCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTGAGGCACACAATCCCTCTTaGAAAGCGCCTTGGTCCATC +
Preference number: 4 (lower is better)
Translates to: KAHGRAWLSPVPLEVTCEAHNPS*KAPWSI
Trigger: GATGGACCAAGGCGCTTTGCAAGAGGGATTGTGTGC...CTCACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361684.8
CDS-3UTR CCA 90 bp AGTGTTTCTGGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCGCTGCTCCATGGCAGTaGGGCTGCCCTCGGGGATCA +
Preference number: 4 (lower is better)
Translates to: SVSGPINKGGVSTVPAASAAPWQ*GCPRGS
Trigger: TGATCCCCGAGGGCAGCCCCACTGCCATGGAGCAGC...GGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACCAGAAACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTGTAGCGCTGCTCGTTaGGGCAGCTGTAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: PCINIPEGPWASLAVPRSCSAAR*GSCSSA
Trigger: TGCGCTGCTACAGCTGCCCCAACGAGCAGCGCTACA...GGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp GGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCAGCCCGCAACCTCAGAAATCCGATaGAATAAGTCTTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: GHSLTVAMAPALPPLQPATSEIR*NKSFPR
Trigger: TCTGGGGAAAGACTTATTCCATCGGATTTCTGAGGT...TGCGGGCTGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp CTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTCACAGAACTGCAGGGTaGCCTGTTTGCAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: LKAHGRAWLSPVPLEVTCHRTAG*PVCRTS
Trigger: TGAGGTTCTGCAAACAGGCCACCCTGCAGTTCTGTG...ACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp GGGTCCCTCTCCCTTACCCTACCAGCTTCTCCAGGTGACTGCAGCCCAAACCCAGCTGACCGCCATGAGTaGCTTCACCACACAGAACTG +
Preference number: 4 (lower is better)
Translates to: GSLSLTLPASPGDCSPNPADRHE*LHHTEL
Trigger: CAGTTCTGTGTGGTGAAGCCACTCATGGCGGTCAGC...TGGGTTTGGGCTGCAGTCACCTGGAGAAGCTGGTAGGGTAAGGGAGAGGGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCTGGCCTGGTCACACTTCTCCAGGATaGCCAGGAGCATGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: GPINKGGVSTVPAASWPGHTSPG*PGACLA
Trigger: GGCAAGGCATGCTCCTGGCCATCCTGGAGAAGTGTG...ACCAGGCCAGGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp ATGCAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCGGGCAGTGCAGGCTaGGCCATGTATAAATATTCC +
Preference number: 4 (lower is better)
Translates to: MQAGRAQVRQGIARCVGEPGSAG*AMYKYS
Trigger: GGAATATTTATACATGGCCCAGCCTGCACTGCCCGG...CTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CTGGACTCAATGGGTTTTCCTCTGATCTCCGACATGATGGAACTTTCTCCTCCTGGGCCTGGGTGCGGCTaGTCCCAGCATGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LDSMGFPLISDMMELSPPGPGCG*SQHAPS
Trigger: GCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCC...AGGAGGAGAAAGTTCCATCATGTCGGAGATCAGAGGAAAACCCATTGAGTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR CCA 90 bp GCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGAGGCAGGCAGAGGTGTaGCCACGACAGGTGGGGATA +
Preference number: 4 (lower is better)
Translates to: AVQAGPCINIPEGPWASLRQAEV*PRQVGI
Trigger: TATCCCCACCTGTCGTGGCCACACCTCTGCCTGCCT...CAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp AACAGCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGACACCAGGCCCTGTGTaGATAGGGGCCCCGAGAGGA +
Preference number: 4 (lower is better)
Translates to: NSNAGQAKTKGVGISSTLTPGPV*IGAPRG
Trigger: TCCTCTCGGGGCCCCTATCCACACAGGGCCTGGTGT...CAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp AACAGCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGCCTGTCCAAGGGCTCTaGGCCCAGCACTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: NSNAGQAKTKGVGISSTLPVQGL*AQHCRI
Trigger: GATCCTGCAGTGCTGGGCCCAGAGCCCTTGGACAGG...CAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp ACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCAGCCCGCACCTAGAATTCATAACTCTCCTCACAGGTaGCAGGGAGGGAACCTGTTC +
Preference number: 4 (lower is better)
Translates to: TVAMAPALPPLQPAPRIHNSPHR*QGGNLF
Trigger: GAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTT...ATGAATTCTAGGTGCGGGCTGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR CCA 90 bp GGATGGAGCGGTCGGGCACATGTTCCCGTCCCCACGACCCCACGGACCGCTGATAATAGAGTGGCTTTCTaGTGGAACTCATGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: GWSGRAHVPVPTTPRTADNRVAF*WNSWQS
Trigger: TGACTGCCATGAGTTCCACCAGAAAGCCACTCTATT...ATCAGCGGTCCGTGGGGTCGTGGGGACGGGAACATGTGCCCGACCGCTCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp GCGCAGGTGCATGTAGATCACAGTCCTCAGTCCAGGCAGCCCCTGGGTGTCTCGAACCTTTGCAGAAAGTaGCAAGCTAGCCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: AQVHVDHSPQSRQPLGVSNLCRK*QASLRS
Trigger: GCTCCTGAGGCTAGCTTGTCACTTTCTGCAAAGGTT...CGAGACACCCAGGGGCTGCCTGGACTGAGGACTGTGATCTACATGCACCTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411679.2
CDS-3UTR TCA 90 bp ATGCAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGAACCTTTGCAGAAAGTaGCAAGCTAGCCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: MQAGRAQVRQGIARCVGENLCRK*QASLRS
Trigger: GCTCCTGAGGCTAGCTTGTCACTTTCTGCAAAGGTT...CTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp GGTGGTGAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCAGGAAATTATAGATaGCCAAGGCCTCATAGCAGT +
Preference number: 4 (lower is better)
Translates to: GGEAGGGAQPDRGYGASTSGNYR*PRPHSS
Trigger: ACTGCTATGAGGCCTTGGTCATCTATAATTTCCTGA...AGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR TCA 90 bp AAACCCAGGGATAATCTGGGTTTTAAATGCCAGGACACTTTGCCTGTAGGGACACGGGGCTGTAGGGGCTaGGCAGCTCCCGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: KPRDNLGFKCQDTLPVGTRGCRG*AAPGWR
Trigger: TCGCCACCCGGGAGCTGCTCAGCCCCTACAGCCCCG...TGTCCCTACAGGCAAAGTGTCCTGGCATTTAAAACCCAGATTATCCCTGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp ATGCAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCGTTCCTCTGGAAGTaGCATGTGAGTGTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: MQAGRAQVRQGIARCVGEPFLWK*HVSVSG
Trigger: ACCAGAAACACTCACATGTCACTTCCAGAGGAACGG...CTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp CCACAGAGCGCCCACATCCCCACTCCTGCCCGGGGTGAGGTGAATCTAGCACTGGGGCGCTTTCATATGTaGCTAAGGCACAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: PQSAHIPTPARGEVNLALGRFHM*LRHRRD
Trigger: ATCTCTTCTGTGCCTTAGTCACATATGAAAGCGCCC...CAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGGGATGTGGGCGCTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp TTATGCATCCTAAGGAGGAGGAGGGGATGGAGCGGTCGGGCACATGTTCCCGTCAGCAGTCGCGGACGGTaGCGAAGTACACGTAGTACT +
Preference number: 4 (lower is better)
Translates to: LCILRRRRGWSGRAHVPVSSRGR*RSTRST
Trigger: AGTACTACGTGTACTTCGGCACCGTCCGCGACTGCT...GACGGGAACATGTGCCCGACCGCTCCATCCCCTCCTCCTCCTTAGGATGCATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp GGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCTGGCCTGGTAGCAGTCGCGGACGGTaGCGAAGTACACGTAGTACT +
Preference number: 4 (lower is better)
Translates to: GPINKGGVSTVPAASWPGSSRGR*RSTRST
Trigger: AGTACTACGTGTACTTCGGCACCGTCCGCGACTGCT...ACCAGGCCAGGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp ACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCGCCAGGAGCATGCCTTaGCAGAAGGAAAGAAAGATG +
Preference number: 4 (lower is better)
Translates to: TAGPQLSSQVAGREPVHSARSMP*QKERKM
Trigger: CATCTTTCTTTCCTTCTGGCAAGGCATGCTCCTGGC...GGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AAACCCAGGGATAATCTGGGTTTTAAATGCCAGGACACTTTGCCTGTAGGGACAAGCCGGCAGCCACGGTaGCCTCGCCCACCGACACGC +
Preference number: 4 (lower is better)
Translates to: KPRDNLGFKCQDTLPVGTSRQPR*PRPPTR
Trigger: GCGTGTCGGTGGGCGAGGGCACCGTGGCTGCCGGCT...TGTCCCTACAGGCAAAGTGTCCTGGCATTTAAAACCCAGATTATCCCTGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp GCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGCCGCAGGGCCAGGGCTaGAAAGAACATCTCCACACA +
Preference number: 4 (lower is better)
Translates to: AVQAGPCINIPEGPWASLPQGQG*KEHLHT
Trigger: TGTGTGGAGATGTTCTTTGCAGCCCTGGCCCTGCGG...CAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp GCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGCAGCACTTCCGCCACTaGAGCCCGCACCTAGAATTC +
Preference number: 4 (lower is better)
Translates to: AVQAGPCINIPEGPWASLQHFRH*SPHLEF
Trigger: GAATTCTAGGTGCGGGCTGCAGTGGCGGAAGTGCTG...CAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp CAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCCAGCACTTCCGCCACTaGAGCCCGCACCTAGAATTC +
Preference number: 4 (lower is better)
Translates to: QAGPCINIPEGPWASLAVQHFRH*SPHLEF
Trigger: GAATTCTAGGTGCGGGCTGCAGTGGCGGAAGTGCTG...GACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp AGTGTTTCTGGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCCTCTGGGCCCAGCACTaGAGGATCCTGCGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SVSGPINKGGVSTVPAASLWAQH*RILRVP
Trigger: TGGCACTCGCAGGATCCTGCAGTGCTGGGCCCAGAG...GGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACCAGAAACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CTGGACTCAATGGGTTTTCCTCTGATCTCCGACATGATGGAACTTTCTCCTCCTAGGCTGCTGCGGTCGTaGGCGACGCTGGATCCGGGG +
Preference number: 4 (lower is better)
Translates to: LDSMGFPLISDMMELSPPRLLRS*ATLDPG
Trigger: CCCCGGATCCAGCGTCGCCCACGACCGCAGCAGCCT...AGGAGGAGAAAGTTCCATCATGTCGGAGATCAGAGGAAAACCCATTGAGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436674.5
ENST00000457534.5
CDS-3UTR CCA 90 bp GCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGGCCTCGAAGAAGCCAGAGATaGCCTGAGCGGCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: ATLGRRKPREWESAALWPRRSQR*PERQLS
Trigger: TGACAACTGCCGCTCAGGCCATCTCTGGCTTCTTCG...AGGCCAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCAACCTCAGAAATCCGATaGAATAAGTCTTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: GGGAQPDRGYGASTSATATSEIR*NKSFPR
Trigger: TCTGGGGAAAGACTTATTCCATCGGATTTCTGAGGT...TGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp GGTGGTGAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTACCTCAGAAATCCGATaGAATAAGTCTTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: GGEAGGGAQPDRGYGASTTSEIR*NKSFPR
Trigger: TCTGGGGAAAGACTTATTCCATCGGATTTCTGAGGT...AGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp AAGCAAGGGCTCTGCCCAAAGCTATCGAGGAAGGACCCAAGTGAGCCGGCAGTGGCTGACCGCCATGAGTaGCTTCACCACACAGAACTG +
Preference number: 4 (lower is better)
Translates to: KQGLCPKLSRKDPSEPAVADRHE*LHHTEL
Trigger: CAGTTCTGTGTGGTGAAGCCACTCATGGCGGTCAGC...CACTGCCGGCTCACTTGGGTCCTTCCTCGATAGCTTTGGGCAGAGCCCTTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CACGATGAAGAGGATGCGCACGATGTAGCGCTGCTCGTTGGGGCAGCTGTAGCAGCTGACCGCCATGAGTaGCTTCACCACACAGAACTG +
Preference number: 4 (lower is better)
Translates to: HDEEDAHDVALLVGAAVAADRHE*LHHTEL
Trigger: CAGTTCTGTGTGGTGAAGCCACTCATGGCGGTCAGC...TGCTACAGCTGCCCCAACGAGCAGCGCTACATCGTGCGCATCCTCTTCATCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR CCA 90 bp CACTTCCGCCACTGCAGCCCGCACCTAGAATTCATCATCAGAGCTGAGCAGGAGTGGAGATGCTCTTCATaGGGGCACAGCGGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: HFRHCSPHLEFIIRAEQEWRCSS*GHSGLV
Trigger: CACAAGGCCGCTGTGCCCCCATGAAGAGCATCTCCA...CTCCTGCTCAGCTCTGATGATGAATTCTAGGTGCGGGCTGCAGTGGCGGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR CCA 90 bp TTATGCATCCTAAGGAGGAGGAGGGGATGGAGCGGTCGGGCACATGTTCCCGTCCCTTCCCCCAGAAGCTaGTCTGAAACGTGGAGACTC +
Preference number: 4 (lower is better)
Translates to: LCILRRRRGWSGRAHVPVPSPRS*SETWRL
Trigger: GAGTCTCCACGTTTCAGACCAGCTTCTGGGGGAAGG...GACGGGAACATGTGCCCGACCGCTCCATCCCCTCCTCCTCCTTAGGATGCATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CAGCCACGGTGCCCTCGCCCACCGACACGCGGGCCGAGTGGATTTTGGGGATGGTTCTGGTGGAACTCATaGCAGTCATACAACAAGATA +
Preference number: 4 (lower is better)
Translates to: QPRCPRPPTRGPSGFWGWFWWNS*QSYNKI
Trigger: TATCTTGTTGTATGACTGCCATGAGTTCCACCAGAA...CCATCCCCAAAATCCACTCGGCCCGCGTGTCGGTGGGCGAGGGCACCGTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR TCA 90 bp CCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCGGTTCATGGTCTCCTTaGGGCTGCTGGAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: PCINIPEGPWASLAVPRSGSWSP*GCWRCS
Trigger: AGAGCATCTCCAGCAGCCTCAAGGAGACCATGAACC...GGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR TCA 90 bp AAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTGAGATTCATCATCAGAGCTaGGCAGGAGAGTCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: KAHGRAWLSPVPLEVTCEIHHQS*AGESSR
Trigger: ACGAGAAGACTCTCCTGCTCAGCTCTGATGATGAAT...CTCACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR TCA 90 bp GGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCAGATTCATCATCAGAGCTaGGCAGGAGAGTCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: GWAPTLLTGGREGTCSFQIHHQS*AGESSR
Trigger: ACGAGAAGACTCTCCTGCTCAGCTCTGATGATGAAT...CTGGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp GTGCCATACATACAGCTGGACTCAATGGGTTTTCCTCTGATCTCCGACATGATGAGGTGGGGCACAGCCTaGCCGTGGCTATGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: VPYIQLDSMGFPLISDMMRWGTA*PWLWRQ
Trigger: CTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCT...CATCATGTCGGAGATCAGAGGAAAACCCATTGAGTCCAGCTGTATGTATGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR TCA 90 bp ACTGGTGACGTCAAAGTCCCCATCCCGGTACTTGCCGAAGGCCTGGAGGACCACCCGTTCCTCTGGAAGTaGCATGTGAGTGTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: TGDVKVPIPVLAEGLEDHPFLWK*HVSVSG
Trigger: ACCAGAAACACTCACATGTCACTTCCAGAGGAACGG...GTGGTCCTCCAGGCCTTCGGCAAGTACCGGGATGGGGACTTTGACGTCACCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR TCA 90 bp AAACCCAGGGATAATCTGGGTTTTAAATGCCAGGACACTTTGCCTGTAGGGACAGGTGCCCAGGGGCCCTaGATGCCCTTCCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: KPRDNLGFKCQDTLPVGTGAQGP*MPFLGG
Trigger: CCCACCCAGGAAGGGCATTCAGGGCCCCTGGGCACC...TGTCCCTACAGGCAAAGTGTCCTGGCATTTAAAACCCAGATTATCCCTGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp TCTCCAGGTGACTGCAGCCCAAACCCAGGGATAATCTGGGTTTTAAATGCCAGGGCGAGTGCCAGCAGCTaGACTAAGAGCCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SPGDCSPNPGIIWVLNARASASS*TKSPRE
Trigger: CTCCCTGGGGCTCTTAGTTCAGCTGCTGGCACTCGC...CCTGGCATTTAAAACCCAGATTATCCCTGGGTTTGGGCTGCAGTCACCTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp ATGGGTTTTCCTCTGATCTCCGACATGATGGAACTTTCTCCTCCTAGGTACTCAGGCGTCTGCGGACGATaGGCGGCAGCCGGACTCTGC +
Preference number: 4 (lower is better)
Translates to: MGFPLISDMMELSPPRYSGVCGR*AAAGLC
Trigger: GCAGAGTCCGGCTGCCGCGCATCGTCCGCAGACGCC...TGAGTACCTAGGAGGAGAAAGTTCCATCATGTCGGAGATCAGAGGAAAACCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436674.5
ENST00000457534.5
CDS-3UTR GCA 90 bp TACATACAGCTGGACTCAATGGGTTTTCCTCTGATCTCCGACATGATGGAACTTGACGCTGGGCGAGGCTaGTGCGGTCGTGGGCGACGC +
Preference number: 4 (lower is better)
Translates to: YIQLDSMGFPLISDMMELDAGRG*CGRGRR
Trigger: GCGTCGCCCACGACCGCAGCAGCCTCGCCCAGCGTC...AAGTTCCATCATGTCGGAGATCAGAGGAAAACCCATTGAGTCCAGCTGTATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436674.5
ENST00000457534.5
CDS-3UTR GCA 90 bp AAGCAAGGGCTCTGCCCAAAGCTATCGAGGAAGGACCCAAGTGAGCCGGCAGTGTTCACCACACAGAACTaGAGGGTGGCCTGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: KQGLCPKLSRKDPSEPAVFTTQN*RVACLQ
Trigger: CTGCAAACAGGCCACCCTGCAGTTCTGTGTGGTGAA...CACTGCCGGCTCACTTGGGTCCTTCCTCGATAGCTTTGGGCAGAGCCCTTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp GGGTCCCTCTCCCTTACCCTACCAGCTTCTCCAGGTGACTGCAGCCCAAACCCAGCCAGGAGCATGCCTTaGCAGAAGGAAAGAAAGATG +
Preference number: 4 (lower is better)
Translates to: GSLSLTLPASPGDCSPNPARSMP*QKERKM
Trigger: CATCTTTCTTTCCTTCTGGCAAGGCATGCTCCTGGC...TGGGTTTGGGCTGCAGTCACCTGGAGAAGCTGGTAGGGTAAGGGAGAGGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AAGCAAGGGCTCTGCCCAAAGCTATCGAGGAAGGACCCAAGTGAGCCGGCAGTGGGATGGCCAGGAGCATaGCTTGCCAGAAGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: KQGLCPKLSRKDPSEPAVGWPGA*LARRKE
Trigger: TTCTTTCCTTCTGGCAAGGCATGCTCCTGGCCATCC...CACTGCCGGCTCACTTGGGTCCTTCCTCGATAGCTTTGGGCAGAGCCCTTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp CAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCTCTGGCTCTGATCCTTaGAGCATGCCACAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: QAGPCINIPEGPWASLAVSGSDP*SMPQRP
Trigger: AGGCCTCTGTGGCATGCTGCAAGGATCAGAGCCAGA...GACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AACAGCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGAGCACTGCAGGATCCTaGGAGTGCCAGCAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: NSNAGQAKTKGVGISSTLSTAGS*ECQQLN
Trigger: GTTCAGCTGCTGGCACTCGCAGGATCCTGCAGTGCT...CAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCAAATCTGGGTTTTAAATaGCAGGACACTTTGCCTGTA +
Preference number: 4 (lower is better)
Translates to: RLEVGHSLTVAMAPALPPNLGFK*QDTLPV
Trigger: TACAGGCAAAGTGTCCTGGCATTTAAAACCCAGATT...TGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp TCTCCAGGTGACTGCAGCCCAAACCCAGGGATAATCTGGGTTTTAAATGCCAGGCCTCTGGCACCCACATaGAGGCCTCTGCCACGAGGA +
Preference number: 4 (lower is better)
Translates to: SPGDCSPNPGIIWVLNARPLAPT*RPLPRG
Trigger: TCCTCGTGGCAGAGGCCTGCATGTGGGTGCCAGAGG...CCTGGCATTTAAAACCCAGATTATCCCTGGGTTTGGGCTGCAGTCACCTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp TTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACAAGACAAGGTAGGTTATaGATCCTAAGGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: FLKAHGRAWLSPVPLEVTRQGRL*ILRRRR
Trigger: CCTCCTCCTCCTTAGGATGCATAACCTACCTTGTCT...TGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp CCCACTCCTGCCCGGGGTGAGGTGAATCTAGCACTGGACAAAGGTGGACAGGGGAGACAAGGTAGGTTATaGATCCTAAGGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PTPARGEVNLALDKGGQGRQGRL*ILRRRR
Trigger: CCTCCTCCTCCTTAGGATGCATAACCTACCTTGTCT...CCCCTGTCCACCTTTGTCCAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GCTCAGGAAATTATAGATGACCAAGGCTGCGAAGAGAGTGTCCAGGAGAAACCAGGTCGTGGGCGACGCTaGATCCGGGGCCAGCACATC +
Preference number: 4 (lower is better)
Translates to: AQEIIDDQGCEESVQEKPGRGRR*IRGQHI
Trigger: GATGTGCTGGCCCCGGATCCAGCGTCGCCCACGACC...TGGTTTCTCCTGGACACTCTCTTCGCAGCCTTGGTCATCTATAATTTCCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457534.5
CDS-3UTR CCA 90 bp GTGCCATACATACAGCTGGACTCAATGGGTTTTCCTCTGATCTCCGACATGATGGGATCACGGAGACGCTaGGCGAGGCTGCTGCGGTCG +
Preference number: 4 (lower is better)
Translates to: VPYIQLDSMGFPLISDMMGSRRR*ARLLRS
Trigger: CGACCGCAGCAGCCTCGCCCAGCGTCTCCGTGATCC...CATCATGTCGGAGATCAGAGGAAAACCCATTGAGTCCAGCTGTATGTATGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436674.5
ENST00000457534.5
CDS-3UTR CCA 90 bp GGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCTGGCCTGGTCCGGGCAGTGCAGGCTaGGCCATGTATAAATATTCC +
Preference number: 4 (lower is better)
Translates to: GPINKGGVSTVPAASWPGPGSAG*AMYKYS
Trigger: GGAATATTTATACATGGCCCAGCCTGCACTGCCCGG...ACCAGGCCAGGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp CGGGCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCAGCTGGTCTGAAACGTaGAGACTCAGACCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: RAVQAGPCINIPEGPWASSWSET*RLRPFP
Trigger: GGGGAAAGGTCTGAGTCTCCACGTTTCAGACCAGCT...GCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp AAGCAAGGGCTCTGCCCAAAGCTATCGAGGAAGGACCCAAGTGAGCCGGCAGTGAGCTGGTCTGAAACGTaGAGACTCAGACCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: KQGLCPKLSRKDPSEPAVSWSET*RLRPFP
Trigger: GGGGAAAGGTCTGAGTCTCCACGTTTCAGACCAGCT...CACTGCCGGCTCACTTGGGTCCTTCCTCGATAGCTTTGGGCAGAGCCCTTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCGTAAGGGCCGTATGTTaGCACTTGTGCGTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: QAGPCINIPEGPWASLAVVRAVC*HLCVQP
Trigger: AGGCTGGACGCACAAGTGCCAACATACGGCCCTTAC...GACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633438.1
CDS-3UTR TCA 90 bp GGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCTGGCCTGGTCGGAGATGTTGTAGATaGTGGTCACGTAGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: GPINKGGVSTVPAASWPGRRCCR*WSRRGS
Trigger: GCTACCTCTACGTGACCATCATCTACAACATCTCCG...ACCAGGCCAGGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR TCA 90 bp TCTCCAGGTGACTGCAGCCCAAACCCAGGGATAATCTGGGTTTTAAATGCCAGGCATAGACCTTGTAGGTaGAGGCGTGCCGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SPGDCSPNPGIIWVLNARHRPCR*RRAAGP
Trigger: TGGCCCTGCGGCACGCCTTCACCTACAAGGTCTATG...CCTGGCATTTAAAACCCAGATTATCCCTGGGTTTGGGCTGCAGTCACCTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp ACTGGTGACGTCAAAGTCCCCATCCCGGTACTTGCCGAAGGCCTGGAGGACCACATTCATCATCAGAGCTaGGCAGGAGAGTCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: TGDVKVPIPVLAEGLEDHIHHQS*AGESSR
Trigger: ACGAGAAGACTCTCCTGCTCAGCTCTGATGATGAAT...GTGGTCCTCCAGGCCTTCGGCAAGTACCGGGATGGGGACTTTGACGTCACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR TCA 90 bp CGGGCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCCGTTCCTCTGGAAGTaGCATGTGAGTGTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: RAVQAGPCINIPEGPWASPFLWK*HVSVSG
Trigger: ACCAGAAACACTCACATGTCACTTCCAGAGGAACGG...GCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp GTGCCATACATACAGCTGGACTCAATGGGTTTTCCTCTGATCTCCGACATGATGCCATGGCAGTGGGGCTaGCCTCGGGGATCACGGAGA +
Preference number: 4 (lower is better)
Translates to: VPYIQLDSMGFPLISDMMPWQWG*PRGSRR
Trigger: TCTCCGTGATCCCCGAGGGCAGCCCCACTGCCATGG...CATCATGTCGGAGATCAGAGGAAAACCCATTGAGTCCAGCTGTATGTATGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000436674.5
ENST00000457534.5
CDS-3UTR GCA 90 bp CCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCGCAGGGTGGCCTGTTTaGAGAACCTCAGAAATCCGA +
Preference number: 4 (lower is better)
Translates to: PCINIPEGPWASLAVPRSAGWPV*RTSEIR
Trigger: TCGGATTTCTGAGGTTCTGCAAACAGGCCACCCTGC...GGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp GCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGTTCACCACACAGAACTaGAGGGTGGCCTGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: AVQAGPCINIPEGPWASLFTTQN*RVACLQ
Trigger: CTGCAAACAGGCCACCCTGCAGTTCTGTGTGGTGAA...CAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp ACTGGTGACGTCAAAGTCCCCATCCCGGTACTTGCCGAAGGCCTGGAGGACCACAGACAAGGTAGGTTATaGATCCTAAGGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TGDVKVPIPVLAEGLEDHRQGRL*ILRRRR
Trigger: CCTCCTCCTCCTTAGGATGCATAACCTACCTTGTCT...GTGGTCCTCCAGGCCTTCGGCAAGTACCGGGATGGGGACTTTGACGTCACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR CCA 90 bp ATGGGTTTTCCTCTGATCTCCGACATGATGGAACTTTCTCCTCCTAGGTACTCAAGGAGCCCATGGCGGTaGCGGCGTCTGCGGACGATG +
Preference number: 4 (lower is better)
Translates to: MGFPLISDMMELSPPRYSRSPWR*RRLRTM
Trigger: CATCGTCCGCAGACGCCGCCACCGCCATGGGCTCCT...TGAGTACCTAGGAGGAGAAAGTTCCATCATGTCGGAGATCAGAGGAAAACCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436674.5
ENST00000457534.5
CDS-3UTR CCA 90 bp GGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCAGTGCCATACATACAGCTaGACTCAATGGGTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: GWAPTLLTGGREGTCSFQCHTYS*TQWVFL
Trigger: GAGGAAAACCCATTGAGTCCAGCTGTATGTATGGCA...CTGGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCCACAGAACTGCAGGGTaGCCTGTTTGCAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: PCINIPEGPWASLAVPRSHRTAG*PVCRTS
Trigger: TGAGGTTCTGCAAACAGGCCACCCTGCAGTTCTGTG...GGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp ATGGGTTTTCCTCTGATCTCCGACATGATGGAACTTTCTCCTCCTAGGTACTCAGCCCATGGGCGAGCCTaGCTGTCCCCCGTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: MGFPLISDMMELSPPRYSAHGRA*LSPVPL
Trigger: CAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGC...TGAGTACCTAGGAGGAGAAAGTTCCATCATGTCGGAGATCAGAGGAAAACCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR CCA 90 bp CAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCCCGGGCAGTGCAGGCTaGGCCATGTATAAATATTCC +
Preference number: 4 (lower is better)
Translates to: QAGPCINIPEGPWASLAVPGSAG*AMYKYS
Trigger: GGAATATTTATACATGGCCCAGCCTGCACTGCCCGG...GACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp AAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTGAGAATAGAGTGGCTTTCTaGTGGAACTCATGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: KAHGRAWLSPVPLEVTCENRVAF*WNSWQS
Trigger: TGACTGCCATGAGTTCCACCAGAAAGCCACTCTATT...CTCACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp CTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTTCAGGAAATTATAGATaGCCAAGGCCTCATAGCAGT +
Preference number: 4 (lower is better)
Translates to: LKAHGRAWLSPVPLEVTCSGNYR*PRPHSS
Trigger: ACTGCTATGAGGCCTTGGTCATCTATAATTTCCTGA...ACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR TCA 90 bp ATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCATACAACAAGATACAAAACTCGGGGCTGTAGGGGCTaGGCAGCTCCCGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: IEWLSGGTHGSHTTRYKTRGCRG*AAPGWR
Trigger: TCGCCACCCGGGAGCTGCTCAGCCCCTACAGCCCCG...AGTTTTGTATCTTGTTGTATGACTGCCATGAGTTCCACCAGAAAGCCACTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp AGTGTTTCTGGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCGGTTCATGGTCTCCTTaGGGCTGCTGGAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: SVSGPINKGGVSTVPAASGSWSP*GCWRCS
Trigger: AGAGCATCTCCAGCAGCCTCAAGGAGACCATGAACC...GGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACCAGAAACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR TCA 90 bp GGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCTGGCCTGGTATGTATAAATATTCCTaGAGGCCCATGGGCGAGCCT +
Preference number: 4 (lower is better)
Translates to: GPINKGGVSTVPAASWPGMYKYS*RPMGEP
Trigger: AGGCTCGCCCATGGGCCTTCAGGAATATTTATACAT...ACCAGGCCAGGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp ATGGGTTTTCCTCTGATCTCCGACATGATGGAACTTTCTCCTCCTAGGTACTCACCATGGCAGTGGGGCTaGCCTCGGGGATCACGGAGA +
Preference number: 4 (lower is better)
Translates to: MGFPLISDMMELSPPRYSPWQWG*PRGSRR
Trigger: TCTCCGTGATCCCCGAGGGCAGCCCCACTGCCATGG...TGAGTACCTAGGAGGAGAAAGTTCCATCATGTCGGAGATCAGAGGAAAACCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000436674.5
ENST00000457534.5
CDS-3UTR GCA 90 bp CCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCGCCAGGAGCATGCCTTaGCAGAAGGAAAGAAAGATG +
Preference number: 4 (lower is better)
Translates to: PCINIPEGPWASLAVPRSARSMP*QKERKM
Trigger: CATCTTTCTTTCCTTCTGGCAAGGCATGCTCCTGGC...GGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp ATGGGTTTTCCTCTGATCTCCGACATGATGGAACTTTCTCCTCCTAGGTACTCAGCTGCTCCATGGCAGTaGGGCTGCCCTCGGGGATCA +
Preference number: 4 (lower is better)
Translates to: MGFPLISDMMELSPPRYSAAPWQ*GCPRGS
Trigger: TGATCCCCGAGGGCAGCCCCACTGCCATGGAGCAGC...TGAGTACCTAGGAGGAGAAAGTTCCATCATGTCGGAGATCAGAGGAAAACCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436674.5
ENST00000457534.5
CDS-3UTR CCA 90 bp ATGGGTTTTCCTCTGATCTCCGACATGATGGAACTTTCTCCTCCTAGGTACTCAGGGCCAGGGGCCAGATaGGGTAGAACACCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: MGFPLISDMMELSPPRYSGPGAR*GRTPGP
Trigger: AGGGCCTGGTGTTCTACCCCATCTGGCCCCTGGCCC...TGAGTACCTAGGAGGAGAAAGTTCCATCATGTCGGAGATCAGAGGAAAACCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR CCA 90 bp CTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTAACCCAGGGATAATCTaGGTTTTAAATGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: LKAHGRAWLSPVPLEVTCNPGII*VLNART
Trigger: TGTCCTGGCATTTAAAACCCAGATTATCCCTGGGTT...ACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CAGGCGGGAAGAGCCCAGGTCAGACAGGGTATTGCACGGTGTGTGGGGGAGCCATTCTGGTGGAACTCATaGCAGTCATACAACAAGATA +
Preference number: 4 (lower is better)
Translates to: QAGRAQVRQGIARCVGEPFWWNS*QSYNKI
Trigger: TATCTTGTTGTATGACTGCCATGAGTTCCACCAGAA...TGGCTCCCCCACACACCGTGCAATACCCTGTCTGACCTGGGCTCTTCCCGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp AACAGCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGCGGAGATGTTGTAGATaGTGGTCACGTAGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: NSNAGQAKTKGVGISSTLRRCCR*WSRRGS
Trigger: GCTACCTCTACGTGACCATCATCTACAACATCTCCG...CAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp GCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGATGTATAAATATTCCTaGAGGCCCATGGGCGAGCCT +
Preference number: 4 (lower is better)
Translates to: AVQAGPCINIPEGPWASLMYKYS*RPMGEP
Trigger: AGGCTCGCCCATGGGCCTTCAGGAATATTTATACAT...CAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR TCA 90 bp AAATGTCACAGAGACCAAAATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCAGACCCCACGGACCGCTaGTTCCCTGCCACTGAGCTC +
Preference number: 4 (lower is better)
Translates to: KCHRDQNRVAFWWNSWQSDPTDR*FPATEL
Trigger: GAGCTCAGTGGCAGGGAATCAGCGGTCCGTGGGGTC...TGACTGCCATGAGTTCCACCAGAAAGCCACTCTATTTTGGTCTCTGTGACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AGTGTTTCTGGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCTTCACCACACAGAACTaGAGGGTGGCCTGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: SVSGPINKGGVSTVPAASFTTQN*RVACLQ
Trigger: CTGCAAACAGGCCACCCTGCAGTTCTGTGTGGTGAA...GGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACCAGAAACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp ACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCAATCTGGGTTTTAAATaGCAGGACACTTTGCCTGTA +
Preference number: 4 (lower is better)
Translates to: TAGPQLSSQVAGREPVHSNLGFK*QDTLPV
Trigger: TACAGGCAAAGTGTCCTGGCATTTAAAACCCAGATT...GGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp GGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCTGGCCTGGTGTGCATGTAGATAAATaGCAAGAGCTGCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: GPINKGGVSTVPAASWPGVHVDK*QELLYH
Trigger: GTGGTAGAGCAGCTCTTGGCATTTATCTACATGCAC...ACCAGGCCAGGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR CCA 90 bp TACATACAGCTGGACTCAATGGGTTTTCCTCTGATCTCCGACATGATGGAACTTCCTGGGAAGGAGGGCTaGGAGCCCCTGAGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: YIQLDSMGFPLISDMMELPGKEG*EPLSPE
Trigger: TTCAGGGCTCAGGGGCTCCCAGCCCTCCTTCCCAGG...AAGTTCCATCATGTCGGAGATCAGAGGAAAACCCATTGAGTCCAGCTGTATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR CCA 90 bp GGGTCCCTCTCCCTTACCCTACCAGCTTCTCCAGGTGACTGCAGCCCAAACCCAGAGACCAAAATAGAGTaGCTTTCTGGTGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: GSLSLTLPASPGDCSPNPETKIE*LSGGTH
Trigger: ATGAGTTCCACCAGAAAGCCACTCTATTTTGGTCTC...TGGGTTTGGGCTGCAGTCACCTGGAGAAGCTGGTAGGGTAAGGGAGAGGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp AAGCAAGGGCTCTGCCCAAAGCTATCGAGGAAGGACCCAAGTGAGCCGGCAGTGTCAGGAAATTATAGATaGCCAAGGCCTCATAGCAGT +
Preference number: 4 (lower is better)
Translates to: KQGLCPKLSRKDPSEPAVSGNYR*PRPHSS
Trigger: ACTGCTATGAGGCCTTGGTCATCTATAATTTCCTGA...CACTGCCGGCTCACTTGGGTCCTTCCTCGATAGCTTTGGGCAGAGCCCTTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AGTGTTTCTGGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCGCCAGGAGCATGCCTTaGCAGAAGGAAAGAAAGATG +
Preference number: 4 (lower is better)
Translates to: SVSGPINKGGVSTVPAASARSMP*QKERKM
Trigger: CATCTTTCTTTCCTTCTGGCAAGGCATGCTCCTGGC...GGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACCAGAAACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR GCA 90 bp ATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCATACAACAAGATACAAAACTGCTCCCAGTGTCCTCTaGCCTCGCCCGGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: IEWLSGGTHGSHTTRYKTAPSVL*PRPGSA
Trigger: TGCACTGCCCGGGCGAGGGCAGAGGACACTGGGAGC...AGTTTTGTATCTTGTTGTATGACTGCCATGAGTTCCACCAGAAAGCCACTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp ATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCATACAACAAGATACAAAACTGCATTGGGGCCTGGGTaGGGCTGGTCCCAGCATGCC +
Preference number: 4 (lower is better)
Translates to: IEWLSGGTHGSHTTRYKTALGPG*GWSQHA
Trigger: GGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGC...AGTTTTGTATCTTGTTGTATGACTGCCATGAGTTCCACCAGAAAGCCACTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCTGCCATACATACAGCTaGACTCAATGGGTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: QAGPCINIPEGPWASLAVCHTYS*TQWVFL
Trigger: GAGGAAAACCCATTGAGTCCAGCTGTATGTATGGCA...GACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp CTGGACTCAATGGGTTTTCCTCTGATCTCCGACATGATGGAACTTTCTCCTCCTCACACTTCTCCAGGATaGCCAGGAGCATGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: LDSMGFPLISDMMELSPPHTSPG*PGACLA
Trigger: GGCAAGGCATGCTCCTGGCCATCCTGGAGAAGTGTG...AGGAGGAGAAAGTTCCATCATGTCGGAGATCAGAGGAAAACCCATTGAGTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR CCA 90 bp GCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGGCCTAACCCAGGGATAATCTaGGTTTTAAATGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: ATLGRRKPREWESAALWPNPGII*VLNART
Trigger: TGTCCTGGCATTTAAAACCCAGATTATCCCTGGGTT...AGGCCAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp ATGGGTTTTCCTCTGATCTCCGACATGATGGAACTTTCTCCTCCTAGGTACTCAAAGCCAGAGATGGCCTaGGCGGCAGTTGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: MGFPLISDMMELSPPRYSKPEMA*AAVVIR
Trigger: CCTGATGACAACTGCCGCTCAGGCCATCTCTGGCTT...TGAGTACCTAGGAGGAGAAAGTTCCATCATGTCGGAGATCAGAGGAAAACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436674.5
ENST00000457534.5
CDS-3UTR TCA 90 bp CACTTCCGCCACTGCAGCCCGCACCTAGAATTCATCATCAGAGCTGAGCAGGAGTCAGGAAATTATAGATaGCCAAGGCCTCATAGCAGT +
Preference number: 4 (lower is better)
Translates to: HFRHCSPHLEFIIRAEQESGNYR*PRPHSS
Trigger: ACTGCTATGAGGCCTTGGTCATCTATAATTTCCTGA...CTCCTGCTCAGCTCTGATGATGAATTCTAGGTGCGGGCTGCAGTGGCGGAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR TCA 90 bp AAATGTCACAGAGACCAAAATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCACACTCCTGCCCGGGGTaGGGTGAATCTAGCACTGGA +
Preference number: 4 (lower is better)
Translates to: KCHRDQNRVAFWWNSWQSHSCPG*GESSTG
Trigger: TCCAGTGCTAGATTCACCTCACCCCGGGCAGGAGTG...TGACTGCCATGAGTTCCACCAGAAAGCCACTCTATTTTGGTCTCTGTGACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp GGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCTGGCCTGGTCTTCCTCACTTTATTTaGTCACTTCTGTCACGCATT +
Preference number: 4 (lower is better)
Translates to: GPINKGGVSTVPAASWPGLPHFI*SLLSRI
Trigger: AATGCGTGACAGAAGTGAGCAAATAAAGTGAGGAAG...ACCAGGCCAGGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GCTCAGGAAATTATAGATGACCAAGGCTGCGAAGAGAGTGTCCAGGAGAAACCACGAAGAAGCCAGAGATaGCCTGAGCGGCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: AQEIIDDQGCEESVQEKPRRSQR*PERQLS
Trigger: TGACAACTGCCGCTCAGGCCATCTCTGGCTTCTTCG...TGGTTTCTCCTGGACACTCTCTTCGCAGCCTTGGTCATCTATAATTTCCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457534.5
CDS-3UTR CCA 90 bp AACAGCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGTGCCATACATACAGCTaGACTCAATGGGTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: NSNAGQAKTKGVGISSTLCHTYS*TQWVFL
Trigger: GAGGAAAACCCATTGAGTCCAGCTGTATGTATGGCA...CAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp CAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCACCTCAGAAATCCGATaGAATAAGTCTTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: QAGPCINIPEGPWASLAVTSEIR*NKSFPR
Trigger: TCTGGGGAAAGACTTATTCCATCGGATTTCTGAGGT...GACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CCA 90 bp AAACCCAGGGATAATCTGGGTTTTAAATGCCAGGACACTTTGCCTGTAGGGACATGGAGATGCTCTTCATaGGGGCACAGCGGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: KPRDNLGFKCQDTLPVGTWRCSS*GHSGLV
Trigger: CACAAGGCCGCTGTGCCCCCATGAAGAGCATCTCCA...TGTCCCTACAGGCAAAGTGTCCTGGCATTTAAAACCCAGATTATCCCTGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp AAATGTCACAGAGACCAAAATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCAAGGCAGGCAGAGGTGTaGCCACGACAGGTGGGGATA +
Preference number: 4 (lower is better)
Translates to: KCHRDQNRVAFWWNSWQSRQAEV*PRQVGI
Trigger: TATCCCCACCTGTCGTGGCCACACCTCTGCCTGCCT...TGACTGCCATGAGTTCCACCAGAAAGCCACTCTATTTTGGTCTCTGTGACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp ATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCATACAACAAGATACAAAACTCGGCAGTGCGGGCTGTaGGCTGTCCTTGGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: IEWLSGGTHGSHTTRYKTRQCGL*AVLGRP
Trigger: TGGCCTACCAAGGACAGCCCACAGCCCGCACTGCCG...AGTTTTGTATCTTGTTGTATGACTGCCATGAGTTCCACCAGAAAGCCACTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp ATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCATACAACAAGATACAAAACTATAAGCCCAGCCTGCTaGGGGTTCCGGAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: IEWLSGGTHGSHTTRYKTISPAC*GFRRPQ
Trigger: CTGGGGCCTCCGGAACCCCCAGCAGGCTGGGCTTAT...AGTTTTGTATCTTGTTGTATGACTGCCATGAGTTCCACCAGAAAGCCACTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp AAACCCAGGGATAATCTGGGTTTTAAATGCCAGGACACTTTGCCTGTAGGGACACGCAAACAGCAACGCTaGGCAGGCGAAAACCAAGGG +
Preference number: 4 (lower is better)
Translates to: KPRDNLGFKCQDTLPVGTRKQQR*AGENQG
Trigger: CCCTTGGTTTTCGCCTGCCCAGCGTTGCTGTTTGCG...TGTCCCTACAGGCAAAGTGTCCTGGCATTTAAAACCCAGATTATCCCTGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp GGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCTGGCCTGGTTTCTGGTGGAACTCATaGCAGTCATACAACAAGATA +
Preference number: 4 (lower is better)
Translates to: GPINKGGVSTVPAASWPGFWWNS*QSYNKI
Trigger: TATCTTGTTGTATGACTGCCATGAGTTCCACCAGAA...ACCAGGCCAGGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp ATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCATACAACAAGATACAAAACTGGCACAGCGGCCTTGTaGGTCCAGCCTCTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: IEWLSGGTHGSHTTRYKTGTAAL*VQPLVS
Trigger: GCTGACAAGAGGCTGGACGCACAAGGCCGCTGTGCC...AGTTTTGTATCTTGTTGTATGACTGCCATGAGTTCCACCAGAAAGCCACTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp ATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCATACAACAAGATACAAAACTCCAGGTCTAGAGGTGTaGAGGGGGAGAGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: IEWLSGGTHGSHTTRYKTPGLEV*RGRGGA
Trigger: AGCCCCTCCTCTCCCCCTCCACACCTCTAGACCTGG...AGTTTTGTATCTTGTTGTATGACTGCCATGAGTTCCACCAGAAAGCCACTCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AAACCCAGGGATAATCTGGGTTTTAAATGCCAGGACACTTTGCCTGTAGGGACAAGGAAGCAAGGGCTCTaGCCAAAGCTATCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KPRDNLGFKCQDTLPVGTRKQGL*PKLSRK
Trigger: CTTCCTCGATAGCTTTGGGCAGAGCCCTTGCTTCCT...TGTCCCTACAGGCAAAGTGTCCTGGCATTTAAAACCCAGATTATCCCTGGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AAATGTCACAGAGACCAAAATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCAGCTTCTCCAGGTGACTaGAGCCCAAACCCAGGGATA +
Preference number: 4 (lower is better)
Translates to: KCHRDQNRVAFWWNSWQSASPGD*SPNPGI
Trigger: TATCCCTGGGTTTGGGCTGCAGTCACCTGGAGAAGC...TGACTGCCATGAGTTCCACCAGAAAGCCACTCTATTTTGGTCTCTGTGACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp CTGGACTCAATGGGTTTTCCTCTGATCTCCGACATGATGGAACTTTCTCCTCCTATAGATGACCAAGGCTaGGAAGAGAGTGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LDSMGFPLISDMMELSPPIDDQG*EESVQE
Trigger: CTCCTGGACACTCTCTTCGCAGCCTTGGTCATCTAT...AGGAGGAGAAAGTTCCATCATGTCGGAGATCAGAGGAAAACCCATTGAGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457534.5
CDS-3UTR CCA 90 bp AGTGTTTCTGGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCAACCCAGGGATAATCTaGGTTTTAAATGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: SVSGPINKGGVSTVPAASNPGII*VLNART
Trigger: TGTCCTGGCATTTAAAACCCAGATTATCCCTGGGTT...GGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACCAGAAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp ATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCATACAACAAGATACAAAACTAGGAGGAGGAGGGGATaGAGCGGTCGGGCACATGTT +
Preference number: 4 (lower is better)
Translates to: IEWLSGGTHGSHTTRYKTRRRRG*SGRAHV
Trigger: AACATGTGCCCGACCGCTCCATCCCCTCCTCCTCCT...AGTTTTGTATCTTGTTGTATGACTGCCATGAGTTCCACCAGAAAGCCACTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp TACATACAGCTGGACTCAATGGGTTTTCCTCTGATCTCCGACATGATGGAACTTATGCTGGGATTCTGGTaGCATGTGATGAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: YIQLDSMGFPLISDMMELMLGFW*HVMSRA
Trigger: GGCCCTGCTCATCACATGCCACCAGAATCCCAGCAT...AAGTTCCATCATGTCGGAGATCAGAGGAAAACCCATTGAGTCCAGCTGTATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457534.5
CDS-3UTR CCA 90 bp ATGGGTTTTCCTCTGATCTCCGACATGATGGAACTTTCTCCTCCTAGGTACTCACAGATGCTGGGATTCTaGTGGCATGTGATGAGCAGG +
Preference number: 4 (lower is better)
Translates to: MGFPLISDMMELSPPRYSQMLGF*WHVMSR
Trigger: CCTGCTCATCACATGCCACCAGAATCCCAGCATCTG...TGAGTACCTAGGAGGAGAAAGTTCCATCATGTCGGAGATCAGAGGAAAACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457534.5
CDS-3UTR CCA 90 bp GCTCAGGAAATTATAGATGACCAAGGCTGCGAAGAGAGTGTCCAGGAGAAACCAGTCAAATCAGCAGAATaGGTCCGCAGATGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: AQEIIDDQGCEESVQEKPVKSAE*VRRCWD
Trigger: ATCCCAGCATCTGCGGACCCATTCTGCTGATTTGAC...TGGTTTCTCCTGGACACTCTCTTCGCAGCCTTGGTCATCTATAATTTCCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457534.5
CDS-3UTR TCA 90 bp ATGGGTTTTCCTCTGATCTCCGACATGATGGAACTTTCTCCTCCTAGGTACTCAAACCTTTGCAGAAAGTaGCAAGCTAGCCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: MGFPLISDMMELSPPRYSNLCRK*QASLRS
Trigger: GCTCCTGAGGCTAGCTTGTCACTTTCTGCAAAGGTT...TGAGTACCTAGGAGGAGAAAGTTCCATCATGTCGGAGATCAGAGGAAAACCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436674.5
ENST00000457534.5
CDS-3UTR GCA 90 bp AGTGTTTCTGGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCCTTCCTCACTTTATTTaGTCACTTCTGTCACGCATT +
Preference number: 4 (lower is better)
Translates to: SVSGPINKGGVSTVPAASLPHFI*SLLSRI
Trigger: AATGCGTGACAGAAGTGAGCAAATAAAGTGAGGAAG...GGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACCAGAAACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp ATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCATACAACAAGATACAAAACTGGGCCGAGTGGATTTTaGGGATGGCCCCACACTTCT +
Preference number: 4 (lower is better)
Translates to: IEWLSGGTHGSHTTRYKTGPSGF*GWPHTS
Trigger: AGAAGTGTGGGGCCATCCCCAAAATCCACTCGGCCC...AGTTTTGTATCTTGTTGTATGACTGCCATGAGTTCCACCAGAAAGCCACTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp AAACCCAGGGATAATCTGGGTTTTAAATGCCAGGACACTTTGCCTGTAGGGACACGAAAACCAAGGGAGTaGGAATCAGCAGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: KPRDNLGFKCQDTLPVGTRKPRE*ESAALW
Trigger: CCAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCG...TGTCCCTACAGGCAAAGTGTCCTGGCATTTAAAACCCAGATTATCCCTGGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CCA 90 bp TCTCCAGGTGACTGCAGCCCAAACCCAGGGATAATCTGGGTTTTAAATGCCAGGGAGACCAAAATAGAGTaGCTTTCTGGTGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: SPGDCSPNPGIIWVLNARETKIE*LSGGTH
Trigger: ATGAGTTCCACCAGAAAGCCACTCTATTTTGGTCTC...CCTGGCATTTAAAACCCAGATTATCCCTGGGTTTGGGCTGCAGTCACCTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR TCA 90 bp GTGCCATACATACAGCTGGACTCAATGGGTTTTCCTCTGATCTCCGACATGATGTCAGGAAATTATAGATaGCCAAGGCTGCGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: VPYIQLDSMGFPLISDMMSGNYR*PRLRRE
Trigger: CTCTCTTCGCAGCCTTGGTCATCTATAATTTCCTGA...CATCATGTCGGAGATCAGAGGAAAACCCATTGAGTCCAGCTGTATGTATGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457534.5
CDS-3UTR GCA 90 bp ATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCATACAACAAGATACAAAACTGCTTCTCCAGGTGACTaGAGCCCAAACCCAGGGATA +
Preference number: 4 (lower is better)
Translates to: IEWLSGGTHGSHTTRYKTASPGD*SPNPGI
Trigger: TATCCCTGGGTTTGGGCTGCAGTCACCTGGAGAAGC...AGTTTTGTATCTTGTTGTATGACTGCCATGAGTTCCACCAGAAAGCCACTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp CTGGACTCAATGGGTTTTCCTCTGATCTCCGACATGATGGAACTTTCTCCTCCTATAAATGCCAAGAGCTaGTCTACCACAGTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LDSMGFPLISDMMELSPPINAKS*STTVLS
Trigger: ACTGAGGACTGTGGTAGAGCAGCTCTTGGCATTTAT...AGGAGGAGAAAGTTCCATCATGTCGGAGATCAGAGGAAAACCCATTGAGTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR CCA 90 bp GTGCCATACATACAGCTGGACTCAATGGGTTTTCCTCTGATCTCCGACATGATGTGCCATACATACAGCTaGACTCAATGGGTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: VPYIQLDSMGFPLISDMMCHTYS*TQWVFL
Trigger: GAGGAAAACCCATTGAGTCCAGCTGTATGTATGGCA...CATCATGTCGGAGATCAGAGGAAAACCCATTGAGTCCAGCTGTATGTATGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436674.5
ENST00000457534.5
CDS-3UTR GCA 90 bp GTGCCATACATACAGCTGGACTCAATGGGTTTTCCTCTGATCTCCGACATGATGAATCTGGGTTTTAAATaGCAGGACACTTTGCCTGTA +
Preference number: 4 (lower is better)
Translates to: VPYIQLDSMGFPLISDMMNLGFK*QDTLPV
Trigger: TACAGGCAAAGTGTCCTGGCATTTAAAACCCAGATT...CATCATGTCGGAGATCAGAGGAAAACCCATTGAGTCCAGCTGTATGTATGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR TCA 90 bp ATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCATACAACAAGATACAAAACTGGGCGCTTTCATATGTaGCTAAGGCACAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: IEWLSGGTHGSHTTRYKTGRFHM*LRHRRD
Trigger: ATCTCTTCTGTGCCTTAGTCACATATGAAAGCGCCC...AGTTTTGTATCTTGTTGTATGACTGCCATGAGTTCCACCAGAAAGCCACTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR GCA 90 bp AAATGTCACAGAGACCAAAATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCACTTCCTCACTTTATTTaGTCACTTCTGTCACGCATT +
Preference number: 4 (lower is better)
Translates to: KCHRDQNRVAFWWNSWQSLPHFI*SLLSRI
Trigger: AATGCGTGACAGAAGTGAGCAAATAAAGTGAGGAAG...TGACTGCCATGAGTTCCACCAGAAAGCCACTCTATTTTGGTCTCTGTGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS GCA 90 bp AAGCTAGCCTCAGGAGCCCATGGCGGTGGCGGCGTCTGCGGACGATaGGCGGCAGCCGGACTCTGCGGGCGGGGCGGGCGGCGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: KLASGAHGGGGVCGR*AAAGLCGRGGRRRS
Trigger: GCTGCGGCGCCGCCCGCCCCGCCCGCAGAGTCCGGCTGCCGCGCATCGTCCGCAGACGCCGCCACCGCCATGGGCTCCTGAGGCTAGCTT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361906.8
ENST00000436674.5
ENST00000457534.5
ENST00000466117.1
CDS GCA 90 bp GAAAGTGACAAGCTAGCCTCAGGAGCCCATGGCGGTGGCGGCGTCTaGGGACGATGCGCGGCAGCCGGACTCTGCGGGCGGGGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: ESDKLASGAHGGGGV*GRCAAAGLCGRGGR
Trigger: CCGCCCGCCCCGCCCGCAGAGTCCGGCTGCCGCGCATCGTCCGCAGACGCCGCCACCGCCATGGGCTCCTGAGGCTAGCTTGTCACTTTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361906.8
ENST00000436674.5
ENST00000457534.5
ENST00000466117.1
CDS-3UTR CAA 90 bp GAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACCCTCCCGGGCAGCTaGGGCCCAACTGCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: EAGGGAQPDRGYGASTSATLPGS*GPTAPP
Trigger: GGGCGGAGCAGTTGGGCCCAAGCTGCCCGGGAGGGT...GGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS GCA 90 bp CGTGCCAGTCGCCAGCACACCCACCCGGGAGCACACAATCCCTCTTaGAAAGCGCCTTGGTCCATCCGCCTCCCTCTCCCGGGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: RASRQHTHPGAHNPS*KAPWSIRLPLPGPP
Trigger: GGGCGGCCCCGGGAGAGGGAGGCGGATGGACCAAGGCGCTTTGCAAGAGGGATTGTGTGCTCCCGGGTGGGTGTGCTGGCGACTGGCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361684.8
CDS-3UTR CAA 90 bp CCACAGAGCGCCCACATCCCCACTCCTGCCCGGGGTGAGGTGAATCTAGCACTGACCCTCCCGGGCAGCTaGGGCCCAACTGCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: PQSAHIPTPARGEVNLALTLPGS*GPTAPP
Trigger: GGGCGGAGCAGTTGGGCCCAAGCTGCCCGGGAGGGT...CAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGGGATGTGGGCGCTCTGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS GCA 90 bp GAGGACGGAAGCAGGCAAGCTCTACAGAGGGTGGCCCTTGACAGGTaGTCTGGGCGCTCCCACCCAGGGGGTGCCGGTGGGGAGGAGATG +
Preference number: 5 (lower is better)
Translates to: EDGSRQALQRVALDR*SGRSHPGGAGGEEM
Trigger: CATCTCCTCCCCACCGGCACCCCCTGGGTGGGAGCGCCCAGAGCACCTGTCAAGGGCCACCCTCTGTAGAGCTTGCCTGCTTCCGTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS GCA 90 bp TTCCACAGGTGCCAGGCGCGTCCCCCACCACCGGGGGAAGTGCTGTaGTCCCTCTACTCTGGAGATCAGGACCAGGCTGGCCTGCACCCC +
Preference number: 5 (lower is better)
Translates to: FHRCQARPPPPGEVL*SLYSGDQDQAGLHP
Trigger: GGGGTGCAGGCCAGCCTGGTCCTGATCTCCAGAGTAGAGGGAGCACAGCACTTCCCCCGGTGGTGGGGGACGCGCCTGGCACCTGTGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS-3UTR CAA 90 bp ACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACGGTCCACACACAAGCATaGGGGCCTGGGTGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: TSIGAWVRLVPACPQHRTVHTQA*GPGCGW
Trigger: CCAGCCGCACCCAGGCCCCAATGCTTGTGTGTGGAC...CGTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CAA 90 bp AGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCAGTCCACACACAAGCATaGGGGCCTGGGTGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: RLEVGHSLTVAMAPALPPVHTQA*GPGCGW
Trigger: CCAGCCGCACCCAGGCCCCAATGCTTGTGTGTGGAC...TGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CAA 90 bp GGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCAGGCTGCCCCCGCCACGTaGGCGTGGAAAGGGAGCGGG +
Preference number: 5 (lower is better)
Translates to: GWAPTLLTGGREGTCSFQAAPAT*AWKGSG
Trigger: CCCGCTCCCTTTCCACGCCAACGTGGCGGGGGCAGC...CTGGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361684.8
CDS TCA 90 bp GAGAAACGAGGACGGAAGCAGGCAAGCTCTACAGAGGGTGGCCCTTaGCAGGTGCTCTGGGCGCTCCCACCCAGGGGGTGCCGGTGGGGA +
Preference number: 5 (lower is better)
Translates to: EKRGRKQASSTEGGP*QVLWALPPRGCRWG
Trigger: TCCCCACCGGCACCCCCTGGGTGGGAGCGCCCAGAGCACCTGTCAAGGGCCACCCTCTGTAGAGCTTGCCTGCTTCCGTCCTCGTTTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS-3UTR CAA 90 bp GGTGGTGAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTCGGGCCGAGTGGATTTaGGGGATGGCCCCACACTTC +
Preference number: 5 (lower is better)
Translates to: GGEAGGGAQPDRGYGASTRAEWI*GMAPHF
Trigger: GAAGTGTGGGGCCATCCCCAAAATCCACTCGGCCCG...AGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTCACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CAA 90 bp GGTGGTGAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTAGGAGAGTCTTCTCGTaGTCGCGGGCGCCACTGAGG +
Preference number: 5 (lower is better)
Translates to: GGEAGGGAQPDRGYGASTRRVFS*SRAPLR
Trigger: CCTCAGTGGCGCCCGCGACAACGAGAAGACTCTCCT...AGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTCACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CAA 90 bp GAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCCTCTTGCAAAGCGCCTaGGTCCATCCGCCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: EAGGGAQPDRGYGASTSALLQSA*VHPPPS
Trigger: AGAGGGAGGCGGATGGACCAAGGCGCTTTGCAAGAG...GGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361684.8
CDS GCA 90 bp CATTCCCAGCCTCCTCTTCCCCATCCTCCAAGGACAACCCCCTTCTaGCCAGTGGCCAGAGGCAGCCCTTCCAGCCCAGTGGAGCGTCCC +
Preference number: 5 (lower is better)
Translates to: HSQPPLPHPPRTTPF*PVARGSPSSPVERP
Trigger: GGGACGCTCCACTGGGCTGGAAGGGCTGCCTCTGGCCACTGGGCAGAAGGGGGTTGTCCTTGGAGGATGGGGAAGAGGAGGCTGGGAATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS CCA 90 bp TGTGAGCACCAGACACCCAGGAAGGTCATGGCTGTGCGGCCACTCTaGCTGCCCCCTTCCCTGAGCCAAGGCACCAGCCTGCGCCAACAC +
Preference number: 5 (lower is better)
Translates to: CEHQTPRKVMAVRPL*LPPSLSQGTSLRQH
Trigger: GTGTTGGCGCAGGCTGGTGCCTTGGCTCAGGGAAGGGGGCAGCCAGAGTGGCCGCACAGCCATGACCTTCCTGGGTGTCTGGTGCTCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474416.1
ENST00000488844.1
CDS-3UTR CAA 90 bp CTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTGGGGGCACAGCGGCCTaGTGCGTCCAGCCTCTTGTC +
Preference number: 5 (lower is better)
Translates to: LKAHGRAWLSPVPLEVTCGGTAA*CVQPLV
Trigger: GACAAGAGGCTGGACGCACAAGGCCGCTGTGCCCCC...ACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CAA 90 bp GCCGCTGGTCCACACACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCAGGTCAGACAGGGTATaGCACGGTGTGTGGGGGAGC +
Preference number: 5 (lower is better)
Translates to: AAGPHTSIGAWVRLVPACRSDRV*HGVWGS
Trigger: GCTCCCCCACACACCGTGCAATACCCTGTCTGACCT...GCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTGTGTGGACCAGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CAA 90 bp GGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCAAGGTCAGACAGGGTATaGCACGGTGTGTGGGGGAGC +
Preference number: 5 (lower is better)
Translates to: GGGAQPDRGYGASTSATARSDRV*HGVWGS
Trigger: GCTCCCCCACACACCGTGCAATACCCTGTCTGACCT...TGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CAA 90 bp CCCACTCCTGCCCGGGGTGAGGTGAATCTAGCACTGGACAAAGGTGGACAGGGGGGCTGTGGGCTGTCCTaGGTAGGCCAGGGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: PTPARGEVNLALDKGGQGGCGLS*VGQGEG
Trigger: CCCTTCCCCCTGGCCTACCAAGGACAGCCCACAGCC...CCCCTGTCCACCTTTGTCCAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CAA 90 bp GACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCGGCTGTGGGCTGTCCTaGGTAGGCCAGGGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: DGWAPTLLTGGREGTCSFGCGLS*VGQGEG
Trigger: CCCTTCCCCCTGGCCTACCAAGGACAGCCCACAGCC...GAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS CCA 90 bp AGCCTGGACATGAACGTGACTGCTGCCAATGGCTCACTCCGGGGCTaGCAGCGGGGCCAACTGCAAGGGTGTCCACTGCTGGGCTCAGAC +
Preference number: 5 (lower is better)
Translates to: SLDMNVTAANGSLRG*QRGQLQGCPLLGSD
Trigger: GTCTGAGCCCAGCAGTGGACACCCTTGCAGTTGGCCCCGCTGCCAGCCCCGGAGTGAGCCATTGGCAGCAGTCACGTTCATGTCCAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488844.1
CDS CCA 90 bp CAGACATGCAGACCAAGAGCGGGACCTACCGTAAGGGCCGTATGTTaGCACTGCCCGCGGCCAAACCCCGGGCAAAAGCAGGGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: QTCRPRAGPTVRAVC*HCPRPNPGQKQGKG
Trigger: CCCCTTGCCCTGCTTTTGCCCGGGGTTTGGCCGCGGGCAGTGCCAACATACGGCCCTTACGGTAGGTCCCGCTCTTGGTCTGCATGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS-3UTR CAA 90 bp AGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCATGGCCTGAGCGGCAGTaGTCATCAGGAACACAGGCT +
Preference number: 5 (lower is better)
Translates to: RLEVGHSLTVAMAPALPPWPERQ*SSGTQA
Trigger: AGCCTGTGTTCCTGATGACAACTGCCGCTCAGGCCA...TGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CAA 90 bp GGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCAGCCCGCATGCAGGGTGGCCTGTTaGCAGAACCTCAGAAATCCG +
Preference number: 5 (lower is better)
Translates to: GHSLTVAMAPALPPLQPACRVAC*QNLRNP
Trigger: CGGATTTCTGAGGTTCTGCAAACAGGCCACCCTGCA...TGCGGGCTGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CAA 90 bp AAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACGGGTGCAGGGTGGCCTGTTaGCAGAACCTCAGAAATCCG +
Preference number: 5 (lower is better)
Translates to: KHWGLGAAGPSMPPAQDGCRVAC*QNLRNP
Trigger: CGGATTTCTGAGGTTCTGCAAACAGGCCACCCTGCA...CCCGTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CAA 90 bp CACAAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACGGGTTCATGGTCTCCTaGAGGCTGCTGGAGATGCTC +
Preference number: 5 (lower is better)
Translates to: HKHWGLGAAGPSMPPAQDGFMVS*RLLEML
Trigger: GAGCATCTCCAGCAGCCTCAAGGAGACCATGAACCC...GTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CAA 90 bp CAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCACCCTCCCGGGCAGCTaGGGCCCAACTGCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: QAGPCINIPEGPWASLAVTLPGS*GPTAPP
Trigger: GGGCGGAGCAGTTGGGCCCAAGCTGCCCGGGAGGGT...GACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS CCA 90 bp CATGGTACCACTCTGCAGCCTGGACATGAACGTGACTGCTGCCAATaGCTCACTCCGGGGCTGGCAGCGGGGCCAACTGCAAGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: HGTTLQPGHERDCCQ*LTPGLAAGPTARVS
Trigger: GGACACCCTTGCAGTTGGCCCCGCTGCCAGCCCCGGAGTGAGCCATTGGCAGCAGTCACGTTCATGTCCAGGCTGCAGAGTGGTACCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488844.1
CDS-3UTR CAA 90 bp CTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTCGGGCCGAGTGGATTTaGGGGATGGCCCCACACTTC +
Preference number: 5 (lower is better)
Translates to: LKAHGRAWLSPVPLEVTCRAEWI*GMAPHF
Trigger: GAAGTGTGGGGCCATCCCCAAAATCCACTCGGCCCG...ACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS GCA 90 bp TCCCTTCATGGTACCACTCTGCAGCCTGGACATGAACGTGACTGCTaGCAATGGCTCACTCCGGGGCTGGCAGCGGGGCCAACTGCAAGG +
Preference number: 5 (lower is better)
Translates to: SLHGTTLQPGHERDC*QWLTPGLAAGPTAR
Trigger: CCTTGCAGTTGGCCCCGCTGCCAGCCCCGGAGTGAGCCATTGGCAGCAGTCACGTTCATGTCCAGGCTGCAGAGTGGTACCATGAAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488844.1
CDS GCA 90 bp CCATCCCTTCATGGTACCACTCTGCAGCCTGGACATGAACGTGACTaGTGCCAATGGCTCACTCCGGGGCTGGCAGCGGGGCCAACTGCA +
Preference number: 5 (lower is better)
Translates to: PSLHGTTLQPGHERD*CQWLTPGLAAGPTA
Trigger: TGCAGTTGGCCCCGCTGCCAGCCCCGGAGTGAGCCATTGGCAGCAGTCACGTTCATGTCCAGGCTGCAGAGTGGTACCATGAAGGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488844.1
CDS GCA 90 bp TCTGGAGATCAGGACCAGGCTGGCCTGCACCCCCAGGGGAGCAGATaGGACTCACTGGCTCCCTCTAAGAGGGCTTCCTCCTCATCTCTC +
Preference number: 5 (lower is better)
Translates to: SGDQDQAGLHPQGSR*DSLAPSKRASSSSL
Trigger: GAGAGATGAGGAGGAAGCCCTCTTAGAGGGAGCCAGTGAGTCGCATCTGCTCCCCTGGGGGTGCAGGCCAGCCTGGTCCTGATCTCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS CCA 90 bp CTGGGCCACCAGGTGGCAACCCCTGGCCTTTGTGCACCTGCTCTTTaGGCACAGAGTAGGTCTTCCCCCACCAGGGAAGGCACAGAGGAA +
Preference number: 5 (lower is better)
Translates to: LGHQVATPGLCAPAL*AQSRSSPTREGTEE
Trigger: TTCCTCTGTGCCTTCCCTGGTGGGGGAAGACCTACTCTGTGCCCAAAGAGCAGGTGCACAAAGGCCAGGGGTTGCCACCTGGTGGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS-3UTR CAA 90 bp GGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCTGGCCTGGTTCCCCATCCCGGTACTaGCCGAAGGCCTGGAGGACC +
Preference number: 5 (lower is better)
Translates to: GPINKGGVSTVPAASWPGSPSRY*PKAWRT
Trigger: GGTCCTCCAGGCCTTCGGCAAGTACCGGGATGGGGA...ACCAGGCCAGGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CAA 90 bp AGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCAGGCCAGGAGCATGCCTaGCCAGAAGGAAAGAAAGAT +
Preference number: 5 (lower is better)
Translates to: RLEVGHSLTVAMAPALPPGQEHA*PEGKKD
Trigger: ATCTTTCTTTCCTTCTGGCAAGGCATGCTCCTGGCC...TGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CAA 90 bp CCCACTCCTGCCCGGGGTGAGGTGAATCTAGCACTGGACAAAGGTGGACAGGGGCGGTGGAGAGACAGCTaGGTGAAAGCAGATGGCGGG +
Preference number: 5 (lower is better)
Translates to: PTPARGEVNLALDKGGQGRWRDS*VKADGG
Trigger: CCCGCCATCTGCTTTCACCAAGCTGTCTCTCCACCG...CCCCTGTCCACCTTTGTCCAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CAA 90 bp CAGGTGCATGTAGATCACAGTCCTCAGTCCAGGCAGCCCCTGGGTGTCTCGTCCCTCATGACATCACACTaGGCCCAGCCGAGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: QVHVDHSPQSRQPLGVSSLMTSH*AQPSPG
Trigger: CCCAGGGCTCGGCTGGGCCAAGTGTGATGTCATGAG...GGACGAGACACCCAGGGGCTGCCTGGACTGAGGACTGTGATCTACATGCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411679.2
CDS GCA 90 bp GGACACACTTCCTGGCCGAGTGGCTGCAGGGATGTCCTCAGGTTGTaGCTCCTCCTCCCATCTGGTAAACAGAGGCAGCACCACTGCTGC +
Preference number: 5 (lower is better)
Translates to: GHTSWPSGCRDVLRL*LLLPSGKQRQHHCC
Trigger: GCAGCAGTGGTGCTGCCTCTGTTTACCAGATGGGAGGAGGAGGCACAACCTGAGGACATCCCTGCAGCCACTCGGCCAGGAAGTGTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403210.2
CDS GCA 90 bp CAGTGGAGCGTCCCGGGCAGCAGCACTTTCACATCACCCTGGGAGTaGTTAAAGCACAGAACTCTCACAGCACACCCAGCCTGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: QWSVPGSSTFTSPWE*LKHRTLTAHPACQP
Trigger: GGGCTGGCAGGCTGGGTGTGCTGTGAGAGTTCTGTGCTTTAAGCACTCCCAGGGTGATGTGAAAGTGCTGCTGCCCGGGACGCTCCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS GCA 90 bp AAGTGCTGTGCTCCCTCTACTCTGGAGATCAGGACCAGGCTGGCCTaGACCCCCAGGGGAGCAGATGCGACTCACTGGCTCCCTCTAAGA +
Preference number: 5 (lower is better)
Translates to: KCCAPSTLEIRTRLA*TPRGADATHWLPLR
Trigger: TCTTAGAGGGAGCCAGTGAGTCGCATCTGCTCCCCTGGGGGTGCAGGCCAGCCTGGTCCTGATCTCCAGAGTAGAGGGAGCACAGCACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS GCA 90 bp GGACCCAGGGTGGAGACTGGCAAGCTATGGGCAGTGAGCCTAGAATaGCCCAGAGAGGCCAGAGCAGGCTCAGCACTGACTGAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: GPRVETGKLWAVSLE*PREARAGSALTEVG
Trigger: CCCAACTTCAGTCAGTGCTGAGCCTGCTCTGGCCTCTCTGGGGCATTCTAGGCTCACTGCCCATAGCTTGCCAGTCTCCACCCTGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS CCA 90 bp CCCGCTGCTTACTCAAAGTCCCCATCCCGGTACTTGCCGAAGGCCTaGAGGACCACAGTGCTGACCGCCATGAGTGGCTTCACCACACAG +
Preference number: 5 (lower is better)
Translates to: PAAYSKSPSRYLPKA*RTTVLTAMSGFTTQ
Trigger: CTGTGTGGTGAAGCCACTCATGGCGGTCAGCACTGTGGTCCTCCAGGCCTTCGGCAAGTACCGGGATGGGGACTTTGAGTAAGCAGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474416.1
ENST00000488844.1
CDS CCA 90 bp CCAGCCCAGTGGAGCGTCCCGGGCAGCAGCACTTTCACATCACCCTaGGAGTGCTTAAAGCACAGAACTCTCACAGCACACCCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: PAQWSVPGSSTFTSP*ECLKHRTLTAHPAC
Trigger: GCAGGCTGGGTGTGCTGTGAGAGTTCTGTGCTTTAAGCACTCCCAGGGTGATGTGAAAGTGCTGCTGCCCGGGACGCTCCACTGGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS CCA 90 bp AGGCAGACATTTCTACAGTCCACACCACCCACCACGGAGCCTGTGTaGGGCCTGCAGGTAGGCCCTGGGGAAGTGGGTTTCTTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: RQTFLQSTPPTTEPV*GLQVGPGEVGFLPP
Trigger: TGGAGGCAAGAAACCCACTTCCCCAGGGCCTACCTGCAGGCCCCACACAGGCTCCGTGGTGGGTGGTGTGGACTGTAGAAATGTCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS-3UTR CAA 90 bp ACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCTGGCCTGAGCGGCAGTaGTCATCAGGAACACAGGCT +
Preference number: 5 (lower is better)
Translates to: TAGPQLSSQVAGREPVHSWPERQ*SSGTQA
Trigger: AGCCTGTGTTCCTGATGACAACTGCCGCTCAGGCCA...GGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CAA 90 bp CCCACTCCTGCCCGGGGTGAGGTGAATCTAGCACTGGACAAAGGTGGACAGGGGTGGCCTGAGCGGCAGTaGTCATCAGGAACACAGGCT +
Preference number: 5 (lower is better)
Translates to: PTPARGEVNLALDKGGQGWPERQ*SSGTQA
Trigger: AGCCTGTGTTCCTGATGACAACTGCCGCTCAGGCCA...CCCCTGTCCACCTTTGTCCAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CAA 90 bp AGAGGATGCGCACGATGTAGCGCTGCTCGTTGGGGCAGCTGTAGCAGCGCAGGTTGGCCTGAGCGGCAGTaGTCATCAGGAACACAGGCT +
Preference number: 5 (lower is better)
Translates to: RGCARCSAARWGSCSSAGWPERQ*SSGTQA
Trigger: AGCCTGTGTTCCTGATGACAACTGCCGCTCAGGCCA...ACCTGCGCTGCTACAGCTGCCCCAACGAGCAGCGCTACATCGTGCGCATCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411679.2
ENST00000436674.5
CDS-3UTR CAA 90 bp GCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGTCCCCATCCCGGTACTaGCCGAAGGCCTGGAGGACC +
Preference number: 5 (lower is better)
Translates to: AVQAGPCINIPEGPWASLSPSRY*PKAWRT
Trigger: GGTCCTCCAGGCCTTCGGCAAGTACCGGGATGGGGA...CAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CAA 90 bp TTATGCATCCTAAGGAGGAGGAGGGGATGGAGCGGTCGGGCACATGTTCCCGTCCGGGCCGAGTGGATTTaGGGGATGGCCCCACACTTC +
Preference number: 5 (lower is better)
Translates to: LCILRRRRGWSGRAHVPVRAEWI*GMAPHF
Trigger: GAAGTGTGGGGCCATCCCCAAAATCCACTCGGCCCG...GACGGGAACATGTGCCCGACCGCTCCATCCCCTCCTCCTCCTTAGGATGCATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CAA 90 bp GACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCGGGTTCATGGTCTCCTaGAGGCTGCTGGAGATGCTC +
Preference number: 5 (lower is better)
Translates to: DGWAPTLLTGGREGTCSFGFMVS*RLLEML
Trigger: GAGCATCTCCAGCAGCCTCAAGGAGACCATGAACCC...GAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CAA 90 bp AAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCTCTGGAAGTGACATGTGAGGGGTTCATGGTCTCCTaGAGGCTGCTGGAGATGCTC +
Preference number: 5 (lower is better)
Translates to: KAHGRAWLSPVPLEVTCEGFMVS*RLLEML
Trigger: GAGCATCTCCAGCAGCCTCAAGGAGACCATGAACCC...CTCACATGTCACTTCCAGAGGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS TCA 90 bp TCCTCCCCTGGTGTTCACGCCAACAGGAAACATCCGTCTGGCGACTaGGTTCCGCCTCCACGTCTAGGTCAGGACGTCCCATCCCCACTT +
Preference number: 5 (lower is better)
Translates to: SSPGVHANRKHPSGD*VPPPRLGQDVPSPL
Trigger: AAGTGGGGATGGGACGTCCTGACCTAGACGTGGAGGCGGAACTCAGTCGCCAGACGGATGTTTCCTGTTGGCGTGAACACCAGGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS-3UTR CAA 90 bp AACAGCAACGCTGGGCAGGCGAAAACCAAGGGAGTGGGAATCAGCAGCACTTTGTCCCCATCCCGGTACTaGCCGAAGGCCTGGAGGACC +
Preference number: 5 (lower is better)
Translates to: NSNAGQAKTKGVGISSTLSPSRY*PKAWRT
Trigger: GGTCCTCCAGGCCTTCGGCAAGTACCGGGATGGGGA...CAAAGTGCTGCTGATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CAA 90 bp GGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCAGCCCGCAAGAAAGATGACGGACTaGACCATGAAGAACTTGAGG +
Preference number: 5 (lower is better)
Translates to: GHSLTVAMAPALPPLQPARKMTD*TMKNLR
Trigger: CCTCAAGTTCTTCATGGTCAAGTCCGTCATCTTTCT...TGCGGGCTGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CAA 90 bp GAGGCTGGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCAGAAAGATGACGGACTaGACCATGAAGAACTTGAGG +
Preference number: 5 (lower is better)
Translates to: EAGGGAQPDRGYGASTSARKMTD*TMKNLR
Trigger: CCTCAAGTTCTTCATGGTCAAGTCCGTCATCTTTCT...GGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CAA 90 bp CGCCAGCACTTCCGCCACTGCAGCCCGCACCTAGAATTCATCATCAGAGCTGAGAGGTCAGACAGGGTATaGCACGGTGTGTGGGGGAGC +
Preference number: 5 (lower is better)
Translates to: RQHFRHCSPHLEFIIRAERSDRV*HGVWGS
Trigger: GCTCCCCCACACACCGTGCAATACCCTGTCTGACCT...CTCAGCTCTGATGATGAATTCTAGGTGCGGGCTGCAGTGGCGGAAGTGCTGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR CAA 90 bp CGGGCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCGTAAGGGCCGTATGTaGGCACTTGTGCGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: RAVQAGPCINIPEGPWASRKGRM*ALVRPA
Trigger: GGCTGGACGCACAAGTGCCAACATACGGCCCTTACG...GCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633438.1
CDS TCA 90 bp CATGTGATGAGCAGGGCCGTCCACACGAAGAAGCCAGAGATGGCCTaGGCGGCAGTTGTCATCAGGAACACAGGCTGCTCCATGGCAGTG +
Preference number: 5 (lower is better)
Translates to: HVMSRAVHTKKPEMA*AAVVIRNTGCSMAV
Trigger: CACTGCCATGGAGCAGCCTGTGTTCCTGATGACAACTGCCGCTCAGGCCATCTCTGGCTTCTTCGTGTGGACGGCCCTGCTCATCACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000411679.2
ENST00000436674.5
ENST00000457534.5
ENST00000466117.1
CDS GCA 90 bp CTTCATGGGGGCACAGCGGCCGTAAGGGCCGTATGTTGGCACTTGTaGGTCCAGCCTCTTGTCAGCATAGACCTTGTAGGTGAAGGCGTG +
Preference number: 5 (lower is better)
Translates to: LHGGTAAVRAVCWHL*VQPLVSIDLVGEGV
Trigger: CACGCCTTCACCTACAAGGTCTATGCTGACAAGAGGCTGGACGCACAAGTGCCAACATACGGCCCTTACGGCCGCTGTGCCCCCATGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633438.1
CDS-3UTR CAA 90 bp GGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCAGGGCCAGGAGCATGCCTaGCCAGAAGGAAAGAAAGAT +
Preference number: 5 (lower is better)
Translates to: GWAPTLLTGGREGTCSFQGQEHA*PEGKKD
Trigger: ATCTTTCTTTCCTTCTGGCAAGGCATGCTCCTGGCC...CTGGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CAA 90 bp CGGGCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCGGGTTCATGGTCTCCTaGAGGCTGCTGGAGATGCTC +
Preference number: 5 (lower is better)
Translates to: RAVQAGPCINIPEGPWASGFMVS*RLLEML
Trigger: GAGCATCTCCAGCAGCCTCAAGGAGACCATGAACCC...GCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CAA 90 bp CAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCCGGTGGAGAGACAGCTaGGTGAAAGCAGATGGCGGG +
Preference number: 5 (lower is better)
Translates to: QAGPCINIPEGPWASLAVRWRDS*VKADGG
Trigger: CCCGCCATCTGCTTTCACCAAGCTGTCTCTCCACCG...GACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CAA 90 bp AAGCATTGGGGCCTGGGTGCGGCTGGTCCCAGCATGCCCCCAGCACAGGACGGGTCTTCCTCACTTTATTaGCTCACTTCTGTCACGCAT +
Preference number: 5 (lower is better)
Translates to: KHWGLGAAGPSMPPAQDGSSSLY*LTSVTH
Trigger: ATGCGTGACAGAAGTGAGCAAATAAAGTGAGGAAGA...CCCGTCCTGTGCTGGGGGCATGCTGGGACCAGCCGCACCCAGGCCCCAATGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS GCA 90 bp CATGTAGATGCTATGGCGGGTGGACACACTTCCTGGCCGAGTGGCTaGAGGGATGTCCTCAGGTTGTGCCTCCTCCTCCCATCTGGTAAA +
Preference number: 5 (lower is better)
Translates to: HVDAMAGGHTSWPSG*RDVLRLCLLLPSGK
Trigger: TTTACCAGATGGGAGGAGGAGGCACAACCTGAGGACATCCCTGCAGCCACTCGGCCAGGAAGTGTGTCCACCCGCCATAGCATCTACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403210.2
CDS GCA 90 bp AGTGGTCACTGTCCCTTTGTGGCCCATCCCTTCATGGTACCACTCTaGAGCCTGGACATGAACGTGACTGCTGCCAATGGCTCACTCCGG +
Preference number: 5 (lower is better)
Translates to: SGHCPFVAHPFMVPL*SLDMNVTAANGSLR
Trigger: CCGGAGTGAGCCATTGGCAGCAGTCACGTTCATGTCCAGGCTGCAGAGTGGTACCATGAAGGGATGGGCCACAAAGGGACAGTGACCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488844.1
CDS CCA 90 bp TTTACACAGCACGGGCTTTGTATCTGTGGACTTGAGCCGACCTCTTaGGGCTCTGACCCTCTCGCTCCCTGCCTCAGCAGTGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: FTQHGLCICGLEPTS*GSDPLAPCLSSGHC
Trigger: ACAGTGACCACTGCTGAGGCAGGGAGCGAGAGGGTCAGAGCCCCAAGAGGTCGGCTCAAGTCCACAGATACAAAGCCCGTGCTGTGTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488844.1
CDS-3UTR CAA 90 bp AGTGTTTCTGGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCAGGAGAGTCTTCTCGTaGTCGCGGGCGCCACTGAGG +
Preference number: 5 (lower is better)
Translates to: SVSGPINKGGVSTVPAASRRVFS*SRAPLR
Trigger: CCTCAGTGGCGCCCGCGACAACGAGAAGACTCTCCT...GGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACCAGAAACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CAA 90 bp GGAGGTGGGGCACAGCCTGACCGTGGCTATGGCGCCAGCACTTCCGCCACTGCATCTTCCTCACTTTATTaGCTCACTTCTGTCACGCAT +
Preference number: 5 (lower is better)
Translates to: GGGAQPDRGYGASTSATASSSLY*LTSVTH
Trigger: ATGCGTGACAGAAGTGAGCAAATAAAGTGAGGAAGA...TGCAGTGGCGGAAGTGCTGGCGCCATAGCCACGGTCAGGCTGTGCCCCACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CAA 90 bp CCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCGCCGTATGTTGGCACTaGTGCGTCCAGCCTCTTGTC +
Preference number: 5 (lower is better)
Translates to: PCINIPEGPWASLAVPRSAVCWH*CVQPLV
Trigger: GACAAGAGGCTGGACGCACAAGTGCCAACATACGGC...GGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633438.1
CDS-3UTR CAA 90 bp CGGGCAGTGCAGGCTGGGCCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCGGCCAGGAGCATGCCTaGCCAGAAGGAAAGAAAGAT +
Preference number: 5 (lower is better)
Translates to: RAVQAGPCINIPEGPWASGQEHA*PEGKKD
Trigger: ATCTTTCTTTCCTTCTGGCAAGGCATGCTCCTGGCC...GCTCGCCCATGGGCCTTCAGGAATATTTATACATGGCCCAGCCTGCACTGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CAA 90 bp GGTCCAATAAATAAAGGCGGCGTGAGCACTGTGCCAGCTGCCTCCTGGCCTGGTAGCACACAATCCCTCTaGCAAAGCGCCTTGGTCCAT +
Preference number: 5 (lower is better)
Translates to: GPINKGGVSTVPAASWPGSTQSL*QSALVH
Trigger: ATGGACCAAGGCGCTTTGCAAGAGGGATTGTGTGCT...ACCAGGCCAGGAGGCAGCTGGCACAGTGCTCACGCCGCCTTTATTTATTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361684.8
CDS-3UTR CAA 90 bp ACGGCTGGGCCCCAACTCTCCTCACAGGTGGCAGGGAGGGAACCTGTTCATTCCAGAAAGATGACGGACTaGACCATGAAGAACTTGAGG +
Preference number: 5 (lower is better)
Translates to: TAGPQLSSQVAGREPVHSRKMTD*TMKNLR
Trigger: CCTCAAGTTCTTCATGGTCAAGTCCGTCATCTTTCT...GGAATGAACAGGTTCCCTCCCTGCCACCTGTGAGGAGAGTTGGGGCCCAGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CAA 90 bp CTGGACTCAATGGGTTTTCCTCTGATCTCCGACATGATGGAACTTTCTCCTCCTAGGAGAGTCTTCTCGTaGTCGCGGGCGCCACTGAGG +
Preference number: 5 (lower is better)
Translates to: LDSMGFPLISDMMELSPPRRVFS*SRAPLR
Trigger: CCTCAGTGGCGCCCGCGACAACGAGAAGACTCTCCT...AGGAGGAGAAAGTTCCATCATGTCGGAGATCAGAGGAAAACCCATTGAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR CAA 90 bp AAATGTCACAGAGACCAAAATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCAGGCTGTGGGCTGTCCTaGGTAGGCCAGGGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: KCHRDQNRVAFWWNSWQSGCGLS*VGQGEG
Trigger: CCCTTCCCCCTGGCCTACCAAGGACAGCCCACAGCC...TGACTGCCATGAGTTCCACCAGAAAGCCACTCTATTTTGGTCTCTGTGACATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CAA 90 bp CCCACTCCTGCCCGGGGTGAGGTGAATCTAGCACTGGACAAAGGTGGACAGGGGTCTTCCTCACTTTATTaGCTCACTTCTGTCACGCAT +
Preference number: 5 (lower is better)
Translates to: PTPARGEVNLALDKGGQGSSSLY*LTSVTH
Trigger: ATGCGTGACAGAAGTGAGCAAATAAAGTGAGGAAGA...CCCCTGTCCACCTTTGTCCAGTGCTAGATTCACCTCACCCCGGGCAGGAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS CCA 90 bp CACCTCACATTTTACAAACCTCACAACACTTCCCAGACCAGGACATaGAGGCTCAGAGGGAGGGGTTACAATCGCACAGCTGAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: HLTFYKPHNTSQTRT*RLRGRGYNRTAEPA
Trigger: AGCTGGCTCAGCTGTGCGATTGTAACCCCTCCCTCTGAGCCTCCATGTCCTGGTCTGGGAAGTGTTGTGAGGTTTGTAAAATGTGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS-3UTR CAA 90 bp AAACCCAGGGATAATCTGGGTTTTAAATGCCAGGACACTTTGCCTGTAGGGACACGGGCCGAGTGGATTTaGGGGATGGCCCCACACTTC +
Preference number: 5 (lower is better)
Translates to: KPRDNLGFKCQDTLPVGTRAEWI*GMAPHF
Trigger: GAAGTGTGGGGCCATCCCCAAAATCCACTCGGCCCG...TGTCCCTACAGGCAAAGTGTCCTGGCATTTAAAACCCAGATTATCCCTGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CAA 90 bp ATGGGTTTTCCTCTGATCTCCGACATGATGGAACTTTCTCCTCCTAGGTACTCACTCATGACATCACACTaGGCCCAGCCGAGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: MGFPLISDMMELSPPRYSLMTSH*AQPSPG
Trigger: CCCAGGGCTCGGCTGGGCCAAGTGTGATGTCATGAG...TGAGTACCTAGGAGGAGAAAGTTCCATCATGTCGGAGATCAGAGGAAAACCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR CAA 90 bp CCATGTATAAATATTCCTGAAGGCCCATGGGCGAGCCTGGCTGTCCCCCGTTCCAGAAAGATGACGGACTaGACCATGAAGAACTTGAGG +
Preference number: 5 (lower is better)
Translates to: PCINIPEGPWASLAVPRSRKMTD*TMKNLR
Trigger: CCTCAAGTTCTTCATGGTCAAGTCCGTCATCTTTCT...GGAACGGGGGACAGCCAGGCTCGCCCATGGGCCTTCAGGAATATTTATACATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
ENST00000633438.1
CDS-3UTR CAA 90 bp AAATGTCACAGAGACCAAAATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCAAGGAGAGTCTTCTCGTaGTCGCGGGCGCCACTGAGG +
Preference number: 5 (lower is better)
Translates to: KCHRDQNRVAFWWNSWQSRRVFS*SRAPLR
Trigger: CCTCAGTGGCGCCCGCGACAACGAGAAGACTCTCCT...TGACTGCCATGAGTTCCACCAGAAAGCCACTCTATTTTGGTCTCTGTGACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS TCA 90 bp GAACCCAGGATTCCTGACTCAGCTTGTGAACTCTTGGAAACATCGTaGAATGCCCCGATATCCCATGAACAGCACTGTGCCCCCAGAAGA +
Preference number: 5 (lower is better)
Translates to: EPRIPDSACELLETS*NAPISHEQHCAPRR
Trigger: TCTTCTGGGGGCACAGTGCTGTTCATGGGATATCGGGGCATTTCACGATGTTTCCAAGAGTTCACAAGCTGAGTCAGGAATCCTGGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS-3UTR CAA 90 bp TACATACAGCTGGACTCAATGGGTTTTCCTCTGATCTCCGACATGATGGAACTTTGGCCTGAGCGGCAGTaGTCATCAGGAACACAGGCT +
Preference number: 5 (lower is better)
Translates to: YIQLDSMGFPLISDMMELWPERQ*SSGTQA
Trigger: AGCCTGTGTTCCTGATGACAACTGCCGCTCAGGCCA...AAGTTCCATCATGTCGGAGATCAGAGGAAAACCCATTGAGTCCAGCTGTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436674.5
ENST00000457534.5
CDS-3UTR CAA 90 bp AAACCCAGGGATAATCTGGGTTTTAAATGCCAGGACACTTTGCCTGTAGGGACATGCAGGGTGGCCTGTTaGCAGAACCTCAGAAATCCG +
Preference number: 5 (lower is better)
Translates to: KPRDNLGFKCQDTLPVGTCRVAC*QNLRNP
Trigger: CGGATTTCTGAGGTTCTGCAAACAGGCCACCCTGCA...TGTCCCTACAGGCAAAGTGTCCTGGCATTTAAAACCCAGATTATCCCTGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS-3UTR CAA 90 bp TACATACAGCTGGACTCAATGGGTTTTCCTCTGATCTCCGACATGATGGAACTTGGCCAGGAGCATGCCTaGCCAGAAGGAAAGAAAGAT +
Preference number: 5 (lower is better)
Translates to: YIQLDSMGFPLISDMMELGQEHA*PEGKKD
Trigger: ATCTTTCTTTCCTTCTGGCAAGGCATGCTCCTGGCC...AAGTTCCATCATGTCGGAGATCAGAGGAAAACCCATTGAGTCCAGCTGTATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436674.5
CDS-3UTR CAA 90 bp ATAGAGTGGCTTTCTGGTGGAACTCATGGCAGTCATACAACAAGATACAAAACTTGCAGGGTGGCCTGTTaGCAGAACCTCAGAAATCCG +
Preference number: 5 (lower is better)
Translates to: IEWLSGGTHGSHTTRYKTCRVAC*QNLRNP
Trigger: CGGATTTCTGAGGTTCTGCAAACAGGCCACCCTGCA...AGTTTTGTATCTTGTTGTATGACTGCCATGAGTTCCACCAGAAAGCCACTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000436674.5
CDS GCA 72 bp TCAGGAGCCCATGGCGGTGGCGGCGTCTGCGGACGATaGGCGGCAGCCGGACTCTGCGGGCGGGGCGGGCGG +
Preference number: 6 (lower is better)
Translates to: SGAHGGGGVCGR*AAAGLCGRGGR
Trigger: CCGCCCGCCCCGCCCGCAGAGTCCGGCTGCCGCGCATCGTCCGCAGACGCCGCCACCGCCATGGGCTCCTGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361906.8
ENST00000436674.5
ENST00000457534.5
ENST00000466117.1
CDS GCA 72 bp GCCCTCGGGGATCACGGAGACGCTGGGCGAGGCTGCTaGGGTCGTGGGCGACGCTGGATCCGGGGCCAGCAC +
Preference number: 6 (lower is better)
Translates to: ALGDHGDAGRGC*GRGRRWIRGQH
Trigger: GTGCTGGCCCCGGATCCAGCGTCGCCCACGACCGCAGCAGCCTCGCCCAGCGTCTCCGTGATCCCCGAGGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000411679.2
ENST00000436674.5
ENST00000457534.5
ENST00000466117.1
CDS GCA 72 bp GCTGCCCTCGGGGATCACGGAGACGCTGGGCGAGGCTaGTGCGGTCGTGGGCGACGCTGGATCCGGGGCCAG +
Preference number: 6 (lower is better)
Translates to: AALGDHGDAGRG*CGRGRRWIRGQ
Trigger: CTGGCCCCGGATCCAGCGTCGCCCACGACCGCAGCAGCCTCGCCCAGCGTCTCCGTGATCCCCGAGGGCAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000411679.2
ENST00000436674.5
ENST00000457534.5
ENST00000466117.1
CDS GCA 72 bp AAGCTAGCCTCAGGAGCCCATGGCGGTGGCGGCGTCTaGGGACGATGCGCGGCAGCCGGACTCTGCGGGCGG +
Preference number: 6 (lower is better)
Translates to: KLASGAHGGGGV*GRCAAAGLCGR
Trigger: CCGCCCGCAGAGTCCGGCTGCCGCGCATCGTCCGCAGACGCCGCCACCGCCATGGGCTCCTGAGGCTAGCTT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361906.8
ENST00000436674.5
ENST00000457534.5
ENST00000466117.1
CDS CCA 72 bp TGGCAGTGGGGCTGCCCTCGGGGATCACGGAGACGCTaGGCGAGGCTGCTGCGGTCGTGGGCGACGCTGGAT +
Preference number: 6 (lower is better)
Translates to: WQWGCPRGSRRR*ARLLRSWATLD
Trigger: ATCCAGCGTCGCCCACGACCGCAGCAGCCTCGCCCAGCGTCTCCGTGATCCCCGAGGGCAGCCCCACTGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000411679.2
ENST00000436674.5
ENST00000457534.5
ENST00000466117.1
CDS CAA 90 bp CCGTGCCAGTCGCCAGCACACCCACCCGGGAGCACACAATCCCTCTaGCAAAGCGCCTTGGTCCATCCGCCTCCCTCTCCCGGGGCCGCC +
Preference number: 6 (lower is better)
Translates to: PCQSPAHPPGSTQSL*QSALVHPPPSPGAA
Trigger: GGCGGCCCCGGGAGAGGGAGGCGGATGGACCAAGGCGCTTTGCAAGAGGGATTGTGTGCTCCCGGGTGGGTGTGCTGGCGACTGGCACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361684.8
CDS GCA 72 bp AGCAGGCAAGCTCTACAGAGGGTGGCCCTTGACAGGTaGTCTGGGCGCTCCCACCCAGGGGGTGCCGGTGGG +
Preference number: 6 (lower is better)
Translates to: SRQALQRVALDR*SGRSHPGGAGG
Trigger: CCCACCGGCACCCCCTGGGTGGGAGCGCCCAGAGCACCTGTCAAGGGCCACCCTCTGTAGAGCTTGCCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS CAA 90 bp CGAGAAACGAGGACGGAAGCAGGCAAGCTCTACAGAGGGTGGCCCTaGACAGGTGCTCTGGGCGCTCCCACCCAGGGGGTGCCGGTGGGG +
Preference number: 6 (lower is better)
Translates to: RETRTEAGKLYRGWP*TGALGAPTQGVPVG
Trigger: CCCCACCGGCACCCCCTGGGTGGGAGCGCCCAGAGCACCTGTCAAGGGCCACCCTCTGTAGAGCTTGCCTGCTTCCGTCCTCGTTTCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS TCA 72 bp GGACGGAAGCAGGCAAGCTCTACAGAGGGTGGCCCTTaGCAGGTGCTCTGGGCGCTCCCACCCAGGGGGTGC +
Preference number: 6 (lower is better)
Translates to: GRKQASSTEGGP*QVLWALPPRGC
Trigger: GCACCCCCTGGGTGGGAGCGCCCAGAGCACCTGTCAAGGGCCACCCTCTGTAGAGCTTGCCTGCTTCCGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS GCA 72 bp TGCCAGGCGCGTCCCCCACCACCGGGGGAAGTGCTGTaGTCCCTCTACTCTGGAGATCAGGACCAGGCTGGC +
Preference number: 6 (lower is better)
Translates to: CQARPPPPGEVL*SLYSGDQDQAG
Trigger: GCCAGCCTGGTCCTGATCTCCAGAGTAGAGGGAGCACAGCACTTCCCCCGGTGGTGGGGGACGCGCCTGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS GCA 72 bp CCAATGGCTCACTCCGGGGCTGGCAGCGGGGCCAACTaGAAGGGTGTCCACTGCTGGGCTCAGACTTCAGGG +
Preference number: 6 (lower is better)
Translates to: PMAHSGAGSGAN*KGVHCWAQTSG
Trigger: CCCTGAAGTCTGAGCCCAGCAGTGGACACCCTTGCAGTTGGCCCCGCTGCCAGCCCCGGAGTGAGCCATTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488844.1
CDS GCA 72 bp CAGGACCAGGCTGGCCTGCACCCCCAGGGGAGCAGATaGGACTCACTGGCTCCCTCTAAGAGGGCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: QDQAGLHPQGSR*DSLAPSKRASS
Trigger: GGAGGAAGCCCTCTTAGAGGGAGCCAGTGAGTCGCATCTGCTCCCCTGGGGGTGCAGGCCAGCCTGGTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS CCA 72 bp TCTGCCCAGTGGCCAGAGGCAGCCCTTCCAGCCCAGTaGAGCGTCCCGGGCAGCAGCACTTTCACATCACCC +
Preference number: 6 (lower is better)
Translates to: SAQWPEAALPAQ*SVPGSSTFTSP
Trigger: GGGTGATGTGAAAGTGCTGCTGCCCGGGACGCTCCACTGGGCTGGAAGGGCTGCCTCTGGCCACTGGGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS GCA 72 bp GGTACCACTCTGCAGCCTGGACATGAACGTGACTGCTaGCAATGGCTCACTCCGGGGCTGGCAGCGGGGCCA +
Preference number: 6 (lower is better)
Translates to: GTTLQPGHERDC*QWLTPGLAAGP
Trigger: TGGCCCCGCTGCCAGCCCCGGAGTGAGCCATTGGCAGCAGTCACGTTCATGTCCAGGCTGCAGAGTGGTACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488844.1
CDS GCA 72 bp AGAGCGGGACCTACCGTAAGGGCCGTATGTTGGCACTaGCCGCGGCCAAACCCCGGGCAAAAGCAGGGCAAG +
Preference number: 6 (lower is better)
Translates to: RAGPTVRAVCWH*PRPNPGQKQGK
Trigger: CTTGCCCTGCTTTTGCCCGGGGTTTGGCCGCGGGCAGTGCCAACATACGGCCCTTACGGTAGGTCCCGCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS GCA 72 bp GCTCCCTCTACTCTGGAGATCAGGACCAGGCTGGCCTaGACCCCCAGGGGAGCAGATGCGACTCACTGGCTC +
Preference number: 6 (lower is better)
Translates to: APSTLEIRTRLA*TPRGADATHWL
Trigger: GAGCCAGTGAGTCGCATCTGCTCCCCTGGGGGTGCAGGCCAGCCTGGTCCTGATCTCCAGAGTAGAGGGAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS CCA 72 bp CAGTTGTCATCAGGAACACAGGCTGCTCCATGGCAGTaGGGCTGCCCTCGGGGATCACGGAGACGCTGGGCG +
Preference number: 6 (lower is better)
Translates to: QLSSGTQAAPWQ*GCPRGSRRRWA
Trigger: CGCCCAGCGTCTCCGTGATCCCCGAGGGCAGCCCCACTGCCATGGAGCAGCCTGTGTTCCTGATGACAACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000411679.2
ENST00000436674.5
ENST00000457534.5
ENST00000466117.1
CDS TCA 72 bp AGGGACAGCTCAGGCCAGGCAGCAGAGCCCCTCTGCTaGGCCCCAGTGGTGCAGGAATGGTTCTCTGCCATG +
Preference number: 6 (lower is better)
Translates to: RDSSGQAAEPLC*APVVQEWFSAM
Trigger: CATGGCAGAGAACCATTCCTGCACCACTGGGGCTCAGCAGAGGGGCTCTGCTGCCTGGCCTGAGCTGTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS GCA 72 bp GCTATGGCGGGTGGACACACTTCCTGGCCGAGTGGCTaGAGGGATGTCCTCAGGTTGTGCCTCCTCCTCCCA +
Preference number: 6 (lower is better)
Translates to: AMAGGHTSWPSG*RDVLRLCLLLP
Trigger: TGGGAGGAGGAGGCACAACCTGAGGACATCCCTGCAGCCACTCGGCCAGGAAGTGTGTCCACCCGCCATAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403210.2
CDS GCA 72 bp CATGGTACCACTCTGCAGCCTGGACATGAACGTGACTaGTGCCAATGGCTCACTCCGGGGCTGGCAGCGGGG +
Preference number: 6 (lower is better)
Translates to: HGTTLQPGHERD*CQWLTPGLAAG
Trigger: CCCCGCTGCCAGCCCCGGAGTGAGCCATTGGCAGCAGTCACGTTCATGTCCAGGCTGCAGAGTGGTACCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488844.1
CDS CCA 72 bp ATGAACGTGACTGCTGCCAATGGCTCACTCCGGGGCTaGCAGCGGGGCCAACTGCAAGGGTGTCCACTGCTG +
Preference number: 6 (lower is better)
Translates to: MNVTAANGSLRG*QRGQLQGCPLL
Trigger: CAGCAGTGGACACCCTTGCAGTTGGCCCCGCTGCCAGCCCCGGAGTGAGCCATTGGCAGCAGTCACGTTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488844.1
CDS CCA 72 bp ACTCTGCAGCCTGGACATGAACGTGACTGCTGCCAATaGCTCACTCCGGGGCTGGCAGCGGGGCCAACTGCA +
Preference number: 6 (lower is better)
Translates to: TLQPGHERDCCQ*LTPGLAAGPTA
Trigger: TGCAGTTGGCCCCGCTGCCAGCCCCGGAGTGAGCCATTGGCAGCAGTCACGTTCATGTCCAGGCTGCAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488844.1
CDS CCA 72 bp AGACCAAGAGCGGGACCTACCGTAAGGGCCGTATGTTaGCACTGCCCGCGGCCAAACCCCGGGCAAAAGCAG +
Preference number: 6 (lower is better)
Translates to: RPRAGPTVRAVC*HCPRPNPGQKQ
Trigger: CTGCTTTTGCCCGGGGTTTGGCCGCGGGCAGTGCCAACATACGGCCCTTACGGTAGGTCCCGCTCTTGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS CAA 72 bp CAGACCAAGAGCGGGACCTACCGTAAGGGCCGTATGTaGGCACTGCCCGCGGCCAAACCCCGGGCAAAAGCA +
Preference number: 6 (lower is better)
Translates to: QTKSGTYRKGRM*ALPAAKPRAKA
Trigger: TGCTTTTGCCCGGGGTTTGGCCGCGGGCAGTGCCAACATACGGCCCTTACGGTAGGTCCCGCTCTTGGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS CAA 90 bp GCAGGGCCGTCCACACGAAGAAGCCAGAGATGGCCTGAGCGGCAGTaGTCATCAGGAACACAGGCTGCTCCATGGCAGTGGGGCTGCCCT +
Preference number: 6 (lower is better)
Translates to: AGPSTRRSQRWPERQ*SSGTQAAPWQWGCP
Trigger: AGGGCAGCCCCACTGCCATGGAGCAGCCTGTGTTCCTGATGACAACTGCCGCTCAGGCCATCTCTGGCTTCTTCGTGTGGACGGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361684.8
ENST00000361906.8
ENST00000411679.2
ENST00000436674.5
ENST00000457534.5
ENST00000466117.1
CDS CAA 90 bp ACAGACATGCAGACCAAGAGCGGGACCTACCGTAAGGGCCGTATGTaGGCACTGCCCGCGGCCAAACCCCGGGCAAAAGCAGGGCAAGGG +
Preference number: 6 (lower is better)
Translates to: TDMQTKSGTYRKGRM*ALPAAKPRAKAGQG
Trigger: CCCTTGCCCTGCTTTTGCCCGGGGTTTGGCCGCGGGCAGTGCCAACATACGGCCCTTACGGTAGGTCCCGCTCTTGGTCTGCATGTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS CCA 72 bp GCCAGCCCGGACCCATTACAGCGGGATCTCCGAGGGTaGGGCTGGGTATCAGCACTTCCAAAAGCTCTCCAG +
Preference number: 6 (lower is better)
Translates to: ASPDPLQRDLRG*GWVSALPKALQ
Trigger: CTGGAGAGCTTTTGGAAGTGCTGATACCCAGCCCCACCCTCGGAGATCCCGCTGTAATGGGTCCGGGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS CCA 72 bp CAGGTGGCAACCCCTGGCCTTTGTGCACCTGCTCTTTaGGCACAGAGTAGGTCTTCCCCCACCAGGGAAGGC +
Preference number: 6 (lower is better)
Translates to: QVATPGLCAPAL*AQSRSSPTREG
Trigger: GCCTTCCCTGGTGGGGGAAGACCTACTCTGTGCCCAAAGAGCAGGTGCACAAAGGCCAGGGGTTGCCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS CCA 72 bp CTGGCCTGCACCCCCAGGGGAGCAGATGCGACTCACTaGCTCCCTCTAAGAGGGCTTCCTCCTCATCTCTCT +
Preference number: 6 (lower is better)
Translates to: LACTPRGADATH*LPLRGLPPHLS
Trigger: AGAGAGATGAGGAGGAAGCCCTCTTAGAGGGAGCCAGTGAGTCGCATCTGCTCCCCTGGGGGTGCAGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS CCA 72 bp GCAGGGAAGGGACCCAGGGTGGAGACTGGCAAGCTATaGGCAGTGAGCCTAGAATGCCCCAGAGAGGCCAGA +
Preference number: 6 (lower is better)
Translates to: AGKGPRVETGKL*AVSLECPREAR
Trigger: TCTGGCCTCTCTGGGGCATTCTAGGCTCACTGCCCATAGCTTGCCAGTCTCCACCCTGGGTCCCTTCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS CAA 90 bp CCACACCAGGTCCAAGGGACACTGCCCTCAATGCTGGGTGTGTGTTaGCTAGATCCTTCCAACTGGGCCACCAGGTGGCAACCCCTGGCC +
Preference number: 6 (lower is better)
Translates to: PHQVQGTLPSMLGVC*LDPSNWATRWQPLA
Trigger: GGCCAGGGGTTGCCACCTGGTGGCCCAGTTGGAAGGATCTAGCAAACACACACCCAGCATTGAGGGCAGTGTCCCTTGGACCTGGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS GCA 72 bp TCCTGGCCGAGTGGCTGCAGGGATGTCCTCAGGTTGTaGCTCCTCCTCCCATCTGGTAAACAGAGGCAGCAC +
Preference number: 6 (lower is better)
Translates to: SWPSGCRDVLRL*LLLPSGKQRQH
Trigger: GTGCTGCCTCTGTTTACCAGATGGGAGGAGGAGGCACAACCTGAGGACATCCCTGCAGCCACTCGGCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403210.2
CDS TCA 72 bp GGTGTTCACGCCAACAGGAAACATCCGTCTGGCGACTaGGTTCCGCCTCCACGTCTAGGTCAGGACGTCCCA +
Preference number: 6 (lower is better)
Translates to: GVHANRKHPSGD*VPPPRLGQDVP
Trigger: TGGGACGTCCTGACCTAGACGTGGAGGCGGAACTCAGTCGCCAGACGGATGTTTCCTGTTGGCGTGAACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS GCA 72 bp GTGGAGACTGGCAAGCTATGGGCAGTGAGCCTAGAATaGCCCAGAGAGGCCAGAGCAGGCTCAGCACTGACT +
Preference number: 6 (lower is better)
Translates to: VETGKLWAVSLE*PREARAGSALT
Trigger: AGTCAGTGCTGAGCCTGCTCTGGCCTCTCTGGGGCATTCTAGGCTCACTGCCCATAGCTTGCCAGTCTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS CCA 72 bp GTGCATGTAGATGCTATGGCGGGTGGACACACTTCCTaGCCGAGTGGCTGCAGGGATGTCCTCAGGTTGTGC +
Preference number: 6 (lower is better)
Translates to: VHVDAMAGGHTS*PSGCRDVLRLC
Trigger: GCACAACCTGAGGACATCCCTGCAGCCACTCGGCCAGGAAGTGTGTCCACCCGCCATAGCATCTACATGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403210.2
CDS CCA 72 bp CTTCATGGGGGCACAGCGGCCGTAAGGGCCGTATGTTaGCACTTGTGCGTCCAGCCTCTTGTCAGCATAGAC +
Preference number: 6 (lower is better)
Translates to: LHGGTAAVRAVC*HLCVQPLVSID
Trigger: GTCTATGCTGACAAGAGGCTGGACGCACAAGTGCCAACATACGGCCCTTACGGCCGCTGTGCCCCCATGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633438.1
CDS CCA 72 bp CCGGACCCATTACAGCGGGATCTCCGAGGGTGGGGCTaGGTATCAGCACTTCCAAAAGCTCTCCAGGGCATT +
Preference number: 6 (lower is better)
Translates to: PDPLQRDLRGWG*VSALPKALQGI
Trigger: AATGCCCTGGAGAGCTTTTGGAAGTGCTGATACCCAGCCCCACCCTCGGAGATCCCGCTGTAATGGGTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS CAA 72 bp GGGGGCACAGCGGCCGTAAGGGCCGTATGTTGGCACTaGTGCGTCCAGCCTCTTGTCAGCATAGACCTTGTA +
Preference number: 6 (lower is better)
Translates to: GGTAAVRAVCWH*CVQPLVSIDLV
Trigger: TACAAGGTCTATGCTGACAAGAGGCTGGACGCACAAGTGCCAACATACGGCCCTTACGGCCGCTGTGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633438.1
CDS CAA 90 bp GCTCTTCATGGGGGCACAGCGGCCGTAAGGGCCGTATGTTGGCACTaGTGCGTCCAGCCTCTTGTCAGCATAGACCTTGTAGGTGAAGGC +
Preference number: 6 (lower is better)
Translates to: ALHGGTAAVRAVCWH*CVQPLVSIDLVGEG
Trigger: GCCTTCACCTACAAGGTCTATGCTGACAAGAGGCTGGACGCACAAGTGCCAACATACGGCCCTTACGGCCGCTGTGCCCCCATGAAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633438.1
CDS GCA 72 bp GGCACAGCGGCCGTAAGGGCCGTATGTTGGCACTTGTaGGTCCAGCCTCTTGTCAGCATAGACCTTGTAGGT +
Preference number: 6 (lower is better)
Translates to: GTAAVRAVCWHL*VQPLVSIDLVG
Trigger: ACCTACAAGGTCTATGCTGACAAGAGGCTGGACGCACAAGTGCCAACATACGGCCCTTACGGCCGCTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633438.1
CDS GCA 72 bp GTCCCGGGCAGCAGCACTTTCACATCACCCTGGGAGTaGTTAAAGCACAGAACTCTCACAGCACACCCAGCC +
Preference number: 6 (lower is better)
Translates to: VPGSSTFTSPWE*LKHRTLTAHPA
Trigger: GGCTGGGTGTGCTGTGAGAGTTCTGTGCTTTAAGCACTCCCAGGGTGATGTGAAAGTGCTGCTGCCCGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS CCA 72 bp AGCTGCTCTACCACAGTCCTCAGTCCAGGCAGCCCCTaGGTGTCTCGTCCCAGCTCTCATGACATCACACTT +
Preference number: 6 (lower is better)
Translates to: SCSTTVLSPGSP*VSRPSSHDITL
Trigger: AAGTGTGATGTCATGAGAGCTGGGACGAGACACCCAGGGGCTGCCTGGACTGAGGACTGTGGTAGAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436674.5
ENST00000466117.1
CDS CCA 72 bp GTGTGTTTGCTAGATCCTTCCAACTGGGCCACCAGGTaGCAACCCCTGGCCTTTGTGCACCTGCTCTTTGGG +
Preference number: 6 (lower is better)
Translates to: VCLLDPSNWATR*QPLAFVHLLFG
Trigger: CCCAAAGAGCAGGTGCACAAAGGCCAGGGGTTGCCACCTGGTGGCCCAGTTGGAAGGATCTAGCAAACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS CAA 90 bp ATGGGTGTGGACAATTTACACAGCACGGGCTTTGTATCTGTGGACTaGAGCCGACCTCTTGGGGCTCTGACCCTCTCGCTCCCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: MGVDNLHSTGFVSVD*SRPLGALTLSLPAS
Trigger: TGAGGCAGGGAGCGAGAGGGTCAGAGCCCCAAGAGGTCGGCTCAAGTCCACAGATACAAAGCCCGTGCTGTGTAAATTGTCCACACCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488844.1
CDS GCA 72 bp TGTCCCTTTGTGGCCCATCCCTTCATGGTACCACTCTaGAGCCTGGACATGAACGTGACTGCTGCCAATGGC +
Preference number: 6 (lower is better)
Translates to: CPFVAHPFMVPL*SLDMNVTAANG
Trigger: GCCATTGGCAGCAGTCACGTTCATGTCCAGGCTGCAGAGTGGTACCATGAAGGGATGGGCCACAAAGGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488844.1
CDS CCA 72 bp TGGAGCGTCCCGGGCAGCAGCACTTTCACATCACCCTaGGAGTGCTTAAAGCACAGAACTCTCACAGCACAC +
Preference number: 6 (lower is better)
Translates to: WSVPGSSTFTSP*ECLKHRTLTAH
Trigger: GTGTGCTGTGAGAGTTCTGTGCTTTAAGCACTCCCAGGGTGATGTGAAAGTGCTGCTGCCCGGGACGCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS CAA 72 bp GTCCAAGGGACACTGCCCTCAATGCTGGGTGTGTGTTaGCTAGATCCTTCCAACTGGGCCACCAGGTGGCAA +
Preference number: 6 (lower is better)
Translates to: VQGTLPSMLGVC*LDPSNWATRWQ
Trigger: TTGCCACCTGGTGGCCCAGTTGGAAGGATCTAGCAAACACACACCCAGCATTGAGGGCAGTGTCCCTTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633056.1
CDS CAA 72 bp GACAATTTACACAGCACGGGCTTTGTATCTGTGGACTaGAGCCGACCTCTTGGGGCTCTGACCCTCTCGCTC +
Preference number: 6 (lower is better)
Translates to: DNLHSTGFVSVD*SRPLGALTLSL
Trigger: GAGCGAGAGGGTCAGAGCCCCAAGAGGTCGGCTCAAGTCCACAGATACAAAGCCCGTGCTGTGTAAATTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488844.1
CDS TCA 72 bp ATTCCTGACTCAGCTTGTGAACTCTTGGAAACATCGTaGAATGCCCCGATATCCCATGAACAGCACTGTGCC +
Preference number: 6 (lower is better)
Translates to: IPDSACELLETS*NAPISHEQHCA
Trigger: GGCACAGTGCTGTTCATGGGATATCGGGGCATTTCACGATGTTTCCAAGAGTTCACAAGCTGAGTCAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633056.1