RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM184A (Homo sapiens)

Ensembl gene IDs: ENSG00000164855

Ensembl transcript IDs: ENST00000297477.10, ENST00000319010.9, ENST00000319018.12, ENST00000421923.5, ENST00000421996.1, ENST00000441933.5, ENST00000449955.1, ENST00000468535.5, ENST00000474813.5

Found 719 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTTCTCCAGGCTCCGGCTCTTCCTGCTCCCGCCGGAGCCGCCGCTaGGGTGGGTGCCGGGCCTGGGCGCCTCGTGCGTGGCCTGCTGCG +
Preference number: 1 (lower is better)
Translates to: ASPGSGSSCSRRSRR*GGCRAWAPRAWPAA
Trigger: CGCAGCAGGCCACGCACGAGGCGCCCAGGCCCGGCACCCACCCCAGCGGCGGCTCCGGCGGGAGCAGGAAGAGCCGGAGCCTGGAGAAGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319018.12
3UTR GCA 90 bp CTGGGTGATCCCAGGGGGTCCCCAGGCTCTTCCGATTGGCTCAGGTaGCCTCTCCTGCGGTGGCGGGCCCACCTGGGTGCCTGCCAGGGC +
Preference number: 1 (lower is better)
Translates to: LGDPRGSPGSSDWLR*PLLRWRAHLGACQG
Trigger: GCCCTGGCAGGCACCCAGGTGGGCCCGCCACCGCAGGAGAGGGCACCTGAGCCAATCGGAAGAGCCTGGGGACCCCCTGGGATCACCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 90 bp GGGCGCCTGGCCAGGGCTCCCCTGTGGCTGGCGTGTGGAGACACGTaGGCCCTTCTCCACGTGCCCACGAGGGCCGTAGCAGGCTCCAAG +
Preference number: 1 (lower is better)
Translates to: GRLARAPLWLACGDT*ALLHVPTRAVAGSK
Trigger: CTTGGAGCCTGCTACGGCCCTCGTGGGCACGTGGAGAAGGGCCCACGTGTCTCCACACGCCAGCCACAGGGGAGCCCTGGCCAGGCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR GCA 90 bp GGCACGGGCACAGGTGGGAGTTGGGAGCAAAGCGGAGGCCCGGGCTaGCCGCCGTCCCCCTTCATCTCCCCACGGACTGTACCAGGCAGC +
Preference number: 1 (lower is better)
Translates to: GTGTGGSWEQSGGPG*PPSPFISPRTVPGS
Trigger: GCTGCCTGGTACAGTCCGTGGGGAGATGAAGGGGGACGGCGGGCAGCCCGGGCCTCCGCTTTGCTCCCAACTCCCACCTGTGCCCGTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR GCA 90 bp CCCTGGGCGGCTACTGTTCTTGCGGCCGCGATTTCCGAGGCCACTTaGACGCCTCCAGCTTCCTGCGGGCAGGGCACGCGTCCGAGGCTC +
Preference number: 1 (lower is better)
Translates to: PWAATVLAAAISEAT*TPPASCGQGTRPRL
Trigger: GAGCCTCGGACGCGTGCCCTGCCCGCAGGAAGCTGGAGGCGTGCAAGTGGCCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGCCCAGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 90 bp GCCCCTGACACCTCAGCCTCTGCCGCCCGGAGCCCAGGCGGTGTCTaGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGC +
Preference number: 1 (lower is better)
Translates to: APDTSASAARSPGGV*VSRKGALGHTPSKR
Trigger: GCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGACACCGCCTGGGCTCCGGGCGGCAGAGGCTGAGGTGTCAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR TCA 90 bp CTGGCCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCCGCCCTGCTaGGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGTGACCGTG +
Preference number: 1 (lower is better)
Translates to: LALSSPDSTGLCPPC*VPRRPQVPLFLVTV
Trigger: CACGGTCACCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAGACCAGTGGAGTCCGGGCTAGAGAGGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 90 bp GGTACTCAGGGCCCTGCCTTCGTGGCCTTGTCCGCTCGCCGCGGGTaGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGAGGCTCCCAG +
Preference number: 1 (lower is better)
Translates to: GTQGPAFVALSARRG*GWHKARFGGSGGSQ
Trigger: CTGGGAGCCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGAGCGGACAAGGCCACGAAGGCAGGGCCCTGAGTACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 90 bp TGCTGGGCCGTGACCGTGAGGCTGGGACAGCCACGGGGGAGGTGCTaGTCAGGTGACCACGTCCTGGGCTCAGTCTCTGAGGGTCAGGCC +
Preference number: 1 (lower is better)
Translates to: CWAVTVRLGQPRGRC*SGDHVLGSVSEGQA
Trigger: GGCCTGACCCTCAGAGACTGAGCCCAGGACGTGGTCACCTGACCAGCACCTCCCCCGTGGCTGTCCCAGCCTCACGGTCACGGCCCAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR GCA 90 bp GACTGCTGGGCCGTGACCGTGAGGCTGGGACAGCCACGGGGGAGGTaGTGGTCAGGTGACCACGTCCTGGGCTCAGTCTCTGAGGGTCAG +
Preference number: 1 (lower is better)
Translates to: DCWAVTVRLGQPRGR*WSGDHVLGSVSEGQ
Trigger: CTGACCCTCAGAGACTGAGCCCAGGACGTGGTCACCTGACCAGCACCTCCCCCGTGGCTGTCCCAGCCTCACGGTCACGGCCCAGCAGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR GCA 90 bp TCACATGTGGGCCCGTGTCTGGCCGCCGCCGCCCTGCCCCGTCCCTaGGGCCACCACCTAATTTATTGCCGTGCGTCCTGCTGCTGTGAC +
Preference number: 1 (lower is better)
Translates to: SHVGPCLAAAALPRP*GHHLIYCRASCCCD
Trigger: GTCACAGCAGCAGGACGCACGGCAATAAATTAGGTGGTGGCCGCAGGGACGGGGCAGGGCGGCGGCGGCCAGACACGGGCCCACATGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR CCA 90 bp CAGGGCCCTGCCTTCGTGGCCTTGTCCGCTCGCCGCGGGTGGGGCTaGCACAAGGCCCGTTTTGGAGGAAGTGGAGGCTCCCAGGAGAAA +
Preference number: 1 (lower is better)
Translates to: QGPAFVALSARRGWG*HKARFGGSGGSQEK
Trigger: TTTCTCCTGGGAGCCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGAGCGGACAAGGCCACGAAGGCAGGGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 90 bp CGCCCTGGGCCAGCCGTGTGTCCTCCCAGAAGCCCCCTTAGTCCCTaGGCGGCTACTGTTCTTGCGGCCGCGATTTCCGAGGCCACTTGC +
Preference number: 1 (lower is better)
Translates to: RPGPAVCPPRSPLSP*AATVLAAAISEATC
Trigger: GCAAGTGGCCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGCCCAGGGACTAAGGGGGCTTCTGGGAGGACACACGGCTGGCCCAGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 90 bp GCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTaGGGTTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCT +
Preference number: 1 (lower is better)
Translates to: APQDRPQRVAGSVPS*GSWCPRLVGRGLLP
Trigger: AGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR CCA 90 bp GGACTGTACCAGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTaGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACGTCTTG +
Preference number: 1 (lower is better)
Translates to: GLYQAAGPRRTGRSG*PVLSRLGVLGVHVL
Trigger: CAAGACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCTGGTACAGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR TCA 90 bp CCAGCCTGGGATCCGTCCGCTGTCTGTCTCCTGAACCAGGGAGTCTaGCCCACTCACAGCTCCCATGGGGTCCGTGCAGCCAAGGCCCCG +
Preference number: 1 (lower is better)
Translates to: PAWDPSAVCLLNQGV*PTHSSHGVRAAKAP
Trigger: CGGGGCCTTGGCTGCACGGACCCCATGGGAGCTGTGAGTGGGTCAGACTCCCTGGTTCAGGAGACAGACAGCGGACGGATCCCAGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR GCA 90 bp GGCTCAGTCTCTGAGGGTCAGGCCGCAGTCCTGAGTGTCCCCATCTaGCCCACCCGGAGCCCCCTGTCCATGCAGCCTCTCCCTTCCAGT +
Preference number: 1 (lower is better)
Translates to: GSVSEGQAAVLSVPI*PTRSPLSMQPLPSS
Trigger: ACTGGAAGGGAGAGGCTGCATGGACAGGGGGCTCCGGGTGGGGCAGATGGGGACACTCAGGACTGCGGCCTGACCCTCAGAGACTGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR CCA 90 bp CTGGCTGGAGGGAGGATGGGAAGTGGGCTCCGAGGGCCTCACAGGTaGGCTCTCAGGAGAGGCCCCACCTTTGGCAGGAGTTGGTGGGTG +
Preference number: 1 (lower is better)
Translates to: LAGGRMGSGLRGPHR*ALRRGPTFGRSWWV
Trigger: CACCCACCAACTCCTGCCAAAGGTGGGGCCTCTCCTGAGAGCCCACCTGTGAGGCCCTCGGAGCCCACTTCCCATCCTCCCTCCAGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 90 bp AGACAGGGTCTGTCTGGGAGCAGAGAGCAAAGCGCCCCTGCACAGTaGCCGGAAGCCCGTGGACTCCTCCGAAAAGCCACGGGCCTGCCC +
Preference number: 1 (lower is better)
Translates to: RQGLSGSREQSAPAQ*PEARGLLRKATGLP
Trigger: GGGCAGGCCCGTGGCTTTTCGGAGGAGTCCACGGGCTTCCGGCCACTGTGCAGGGGCGCTTTGCTCTCTGCTCCCAGACAGACCCTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR CCA 90 bp GACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTaGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGC +
Preference number: 1 (lower is better)
Translates to: DRPQRVAGSVPSWGS*CPRLVGRGLLPALG
Trigger: GCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR TCA 90 bp CTCCCTCCAGCTGCCCAGCCTGGGATCCGTCCGCTGTCTGTCTCCTaGACCAGGGAGTCTGACCCACTCACAGCTCCCATGGGGTCCGTG +
Preference number: 1 (lower is better)
Translates to: LPPAAQPGIRPLSVS*TRESDPLTAPMGSV
Trigger: CACGGACCCCATGGGAGCTGTGAGTGGGTCAGACTCCCTGGTTCAGGAGACAGACAGCGGACGGATCCCAGGCTGGGCAGCTGGAGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR GCA 90 bp CAGAGAAGGATACTGAGGCCAGGAGAGGCTAGAGAGCTTGGCGGGTaGGCTGGGCCCAGATACGCGGCTCCTGCCTGCCTCATGGCCTGC +
Preference number: 1 (lower is better)
Translates to: QRRILRPGEARELGG*AGPRYAAPACLMAC
Trigger: GCAGGCCATGAGGCAGGCAGGAGCCGCGTATCTGGGCCCAGCGCACCCGCCAAGCTCTCTAGCCTCTCCTGGCCTCAGTATCCTTCTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR GCA 90 bp TCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCTGCAGTGCTTTaGTGGAGAAGGGACTCCCTGGTCCCCAGGGTGGACGGAGCCGCT +
Preference number: 1 (lower is better)
Translates to: SCGPWASTCPWPAVL*WRRDSLVPRVDGAA
Trigger: AGCGGCTCCGTCCACCCTGGGGACCAGGGAGTCCCTTCTCCAGCAAAGCACTGCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR GCA 90 bp CCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCTGCAGTaGTTTGCTGGAGAAGGGACTCCCTGGTCCCCAGGGTGGACGGAG +
Preference number: 1 (lower is better)
Translates to: PRLVGRGLLPALGLQ*FAGEGTPWSPGWTE
Trigger: CTCCGTCCACCCTGGGGACCAGGGAGTCCCTTCTCCAGCAAAGCACTGCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR CCA 90 bp AGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCGGGCTaGGCCCTGCAGACCCACTGGCCTTGGATCCCCATGTCCTCAGCC +
Preference number: 1 (lower is better)
Translates to: SRAGRSSAYLIRQPG*ALQTHWPWIPMSSA
Trigger: GGCTGAGGACATGGGGATCCAAGGCCAGTGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR GCA 90 bp CAGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCGGGCTGGGCCCTaGAGACCCACTGGCCTTGGATCCCCATGTCCTCAGCCCAGGAAG +
Preference number: 1 (lower is better)
Translates to: QGGAQPILSGSRAGP*RPTGLGSPCPQPRK
Trigger: CTTCCTGGGCTGAGGACATGGGGATCCAAGGCCAGTGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAGATAGGCTGAGCTCCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR GCA 90 bp GTGAGCAAGACAGGGTCTGTCTGGGAGCAGAGAGCAAAGCGCCCCTaGACAGTGGCCGGAAGCCCGTGGACTCCTCCGAAAAGCCACGGG +
Preference number: 1 (lower is better)
Translates to: VSKTGSVWEQRAKRP*TVAGSPWTPPKSHG
Trigger: CCCGTGGCTTTTCGGAGGAGTCCACGGGCTTCCGGCCACTGTGCAGGGGCGCTTTGCTCTCTGCTCCCAGACAGACCCTGTCTTGCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR TCA 90 bp CTCCGTCTCTCTGGGCTCGGTCGCTGTCCCAGCTGGCTTGAGCGTTaGGCATGTCAGTTTCCTGGCACAGTCCTCGGCTGGTCTGAGGGG +
Preference number: 1 (lower is better)
Translates to: LRLSGLGRCPSWLER*ACQFPGTVLGWSEG
Trigger: CCCCTCAGACCAGCCGAGGACTGTGCCAGGAAACTGACATGCTCAACGCTCAAGCCAGCTGGGACAGCGACCGAGCCCAGAGAGACGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 90 bp TCTCAGAGGAGCCTGCAGGAAGCTGTGAGCAAGACAGGGTCTGTCTaGGAGCAGAGAGCAAAGCGCCCCTGCACAGTGGCCGGAAGCCCG +
Preference number: 1 (lower is better)
Translates to: SQRSLQEAVSKTGSV*EQRAKRPCTVAGSP
Trigger: CGGGCTTCCGGCCACTGTGCAGGGGCGCTTTGCTCTCTGCTCCCAGACAGACCCTGTCTTGCTCACAGCTTCCTGCAGGCTCCTCTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR CCA 90 bp GCTGACAGAGTGAGACACGGGGGCCGCCTGGTGGGTCTATTCCTGTaGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGCCGTGCAGGG +
Preference number: 1 (lower is better)
Translates to: ADRVRHGGRLVGLFL*GSNKTGGRLCSRAG
Trigger: CCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAGACCCACCAGGCGGCCCCCGTGTCTCACTCTGTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 90 bp TTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTaGCCTGCAGTGCTTTGCTGGAGAAGGGACTCCCTGGTCCCCAGG +
Preference number: 1 (lower is better)
Translates to: FLVSTSCGPWASTCP*PAVLCWRRDSLVPR
Trigger: CCTGGGGACCAGGGAGTCCCTTCTCCAGCAAAGCACTGCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR CCA 90 bp TGGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACGTCTTGTaGGCCGTGGGCTTCTACCTGCCCTTGGCCTGCAGTGCTTTGCTG +
Preference number: 1 (lower is better)
Translates to: WPVLSRLGVLGVHVL*AVGFYLPLACSALL
Trigger: CAGCAAAGCACTGCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR TCA 90 bp GGATGCTGGGGATTTTCAGCTGGACCATCTCCCAGAGAAGGATACTaGGGCCAGGAGAGGCTAGAGAGCTTGGCGGGTGCGCTGGGCCCA +
Preference number: 1 (lower is better)
Translates to: GCWGFSAGPSPREGY*GQERLESLAGALGP
Trigger: TGGGCCCAGCGCACCCGCCAAGCTCTCTAGCCTCTCCTGGCCTCAGTATCCTTCTCTGGGAGATGGTCCAGCTGAAAATCCCCAGCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR GCA 90 bp GCCGCCGCCGCCCTGCCCCGTCCCTGCGGCCACCACCTAATTTATTaGCGTGCGTCCTGCTGCTGTGACTGCTTTTGTACCTTTGCAATA +
Preference number: 1 (lower is better)
Translates to: AAAALPRPCGHHLIY*RASCCCDCFCTFAI
Trigger: TATTGCAAAGGTACAAAAGCAGTCACAGCAGCAGGACGCACGGCAATAAATTAGGTGGTGGCCGCAGGGACGGGGCAGGGCGGCGGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR GCA 90 bp TTGGGGTTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTaGCCTTGGCCTGCAGTGCTTTGCTGGAGAAGGGACTCCCTGGTC +
Preference number: 1 (lower is better)
Translates to: LGFLVSTSCGPWAST*PWPAVLCWRRDSLV
Trigger: GACCAGGGAGTCCCTTCTCCAGCAAAGCACTGCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR GCA 90 bp GTGGGTCTATTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTaGAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCG +
Preference number: 1 (lower is better)
Translates to: VGLFLWGSNKTGGRL*SRAGRSSAYLIRQP
Trigger: CGGCTGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAGACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR GCA 90 bp TTGTACCTTTGCAATAAAGAATTTTCTGGTTTCAGACCCTTTCGTTaGGTAGCTGGTGCTTTCAGCTGGGGCTTTCTTGGGCCAAGAACC +
Preference number: 1 (lower is better)
Translates to: LYLCNKEFSGFRPFR*VAGAFSWGFLGPRT
Trigger: GGTTCTTGGCCCAAGAAAGCCCCAGCTGAAAGCACCAGCTACGCAACGAAAGGGTCTGAAACCAGAAAATTCTTTATTGCAAAGGTACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR GCA 90 bp TGCGGCCACCACCTAATTTATTGCCGTGCGTCCTGCTGCTGTGACTaGTTTTGTACCTTTGCAATAAAGAATTTTCTGGTTTCAGACCCT +
Preference number: 1 (lower is better)
Translates to: CGHHLIYCRASCCCD*FCTFAIKNFLVSDP
Trigger: AGGGTCTGAAACCAGAAAATTCTTTATTGCAAAGGTACAAAAGCAGTCACAGCAGCAGGACGCACGGCAATAAATTAGGTGGTGGCCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR CCA 90 bp GGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTGGTGGCGGGCCCACCTaGGTGCCTGCCAGGGCCATC +
Preference number: 2 (lower is better)
Translates to: GPRRTGRSGWPVLSRLGVGGGPT*VPARAI
Trigger: GATGGCCCTGGCAGGCACCCAGGTGGGCCCGCCACC...AACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR CCA 90 bp CGCCGGCCTGCGGCGCCCGGAGCTGCTGACTGTGTCAGAGCCCGGCTGCCCAGCCTCTCCGCCCCACAGTaGCTCCTGGGGCTGATGGCT +
Preference number: 2 (lower is better)
Translates to: RRPAAPGAADCVRARLPSLSAPQ*LLGLMA
Trigger: AGCCATCAGCCCCAGGAGCCACTGTGGGGCGGAGAG...GCTGGGCAGCCGGGCTCTGACACAGTCAGCAGCTCCGGGCGCCGCAGGCCGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR TCA 90 bp GCGCCTGGCCAGGGCTCCCCTGTGGCTGGCGTGTGGAGACACGTGGGCCCTTCTGGCGCCCGGAGCTGCTaGCTGTGTCAGAGCCCGGCT +
Preference number: 2 (lower is better)
Translates to: APGQGSPVAGVWRHVGPSGARSC*LCQSPA
Trigger: AGCCGGGCTCTGACACAGTCAGCAGCTCCGGGCGCC...AGAAGGGCCCACGTGTCTCCACACGCCAGCCACAGGGGAGCCCTGGCCAGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp GCGCCTGGCCAGGGCTCCCCTGTGGCTGGCGTGTGGAGACACGTGGGCCCTTCTACGCCTCCAGCTTCCTaGGGGCAGGGCACGCGTCCG +
Preference number: 2 (lower is better)
Translates to: APGQGSPVAGVWRHVGPSTPPAS*GQGTRP
Trigger: CGGACGCGTGCCCTGCCCGCAGGAAGCTGGAGGCGT...AGAAGGGCCCACGTGTCTCCACACGCCAGCCACAGGGGAGCCCTGGCCAGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp GTCTGTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGTGCCCTCTCCTGCGGTaGCGGGCCCACCTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: VCARPAESLGDPRSRCSWCPLLR*RAHLGA
Trigger: GGCACCCAGGTGGGCCCGCCACCGCAGGAGAGGGCA...CCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR TCA 90 bp TCAGTCTCTGAGGGTCAGGCCGCAGTCCTGAGTGTCCCCATCTGCCCCACCCGGCCCCTCGAGGCAGGTTaGGCCCCGGCCTGGACCGCC +
Preference number: 2 (lower is better)
Translates to: SVSEGQAAVLSVPICPTRPLEAG*APAWTA
Trigger: GGCGGTCCAGGCCGGGGCTCAACCTGCCTCGAGGGG...CCGGGTGGGGCAGATGGGGACACTCAGGACTGCGGCCTGACCCTCAGAGACTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR CCA 90 bp CGGGGTGGTGCCCACTGGAGCTTCCTGTCTGCTCTCCACGCCCAGTGCCTGAGCTGCCCTCTCCTGCGGTaGCGGGCCCACCTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: RGGAHWSFLSALHAQCLSCPLLR*RAHLGA
Trigger: GGCACCCAGGTGGGCCCGCCACCGCAGGAGAGGGCA...GCTCAGGCACTGGGCGTGGAGAGCAGACAGGAAGCTCCAGTGGGCACCACCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp GCGCCTGGCCAGGGCTCCCCTGTGGCTGGCGTGTGGAGACACGTGGGCCCTTCTCCTGGGGCTGATGGCTaGGTGATCCCAGGGGGTCCC +
Preference number: 2 (lower is better)
Translates to: APGQGSPVAGVWRHVGPSPGADG*VIPGGP
Trigger: GGGACCCCCTGGGATCACCCAGCCATCAGCCCCAGG...AGAAGGGCCCACGTGTCTCCACACGCCAGCCACAGGGGAGCCCTGGCCAGGCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp GTCCGCTCGCCGCGGGTGGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGAGGAGGGCCCTGCCTTCGTaGCCTTGTCCGCTCGCCGCG +
Preference number: 2 (lower is better)
Translates to: VRSPRVGLAQGPFWRKWRRALPS*PCPLAA
Trigger: CGCGGCGAGCGGACAAGGCCACGAAGGCAGGGCCCT...CCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGAGCGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp GTCCGCTCGCCGCGGGTGGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGAGGCCTGGACCACGAGGCTaGCCACCCCAGACAGGTGGG +
Preference number: 2 (lower is better)
Translates to: VRSPRVGLAQGPFWRKWRPGPRG*PPQTGG
Trigger: CCCACCTGTCTGGGGTGGGCAGCCTCGTGGTCCAGG...CCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGAGCGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp CCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCCGCCCTGCTGAGTCCCTCGGAACGCCTCCAGCTTCCTaGGGGCAGGGCACGCGTCCG +
Preference number: 2 (lower is better)
Translates to: PSLARTPLVCARPAESLGTPPAS*GQGTRP
Trigger: CGGACGCGTGCCCTGCCCGCAGGAAGCTGGAGGCGT...TCCGAGGGACTCAGCAGGGCGGGCACAGACCAGTGGAGTCCGGGCTAGAGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp ACCGCGTCCTGCTCCTCAGGCTCATGCCCTGCGGGAACAGAAGCCAAGACCCGGACACGCTCCCCTGGCTaGGCGCCTGGCCAGGGCTCC +
Preference number: 2 (lower is better)
Translates to: TASCSSGSCPAGTEAKTRTRSPG*APGQGS
Trigger: GGAGCCCTGGCCAGGCGCCCAGCCAGGGGAGCGTGT...CCGGGTCTTGGCTTCTGTTCCCGCAGGGCATGAGCCTGAGGAGCAGGACGCGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp GTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGTGACACAGCCCCACGGTGCTaGCCAGCCTCACAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: VPALLSPSETPGPAVPGDTAPRC*PASQVP
Trigger: GGGCACCTGTGAGGCTGGCCAGCACCGTGGGGCTGT...GTCACCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CAA 90 bp GGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTaGGGGTTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACC +
Preference number: 2 (lower is better)
Translates to: GPAGQAAAGGRFCPV*GFLVSTSCGPWAST
Trigger: GGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR TCA 90 bp TGGGCTCCGAGGGCCTCACAGGTGGGCTCTCAGGAGAGGCCCCACCTTTGGCAGTCTCCACCTCCGGGATaGCCCCGCACCGCTCCAGGA +
Preference number: 2 (lower is better)
Translates to: WAPRASQVGSQERPHLWQSPPPG*PRTAPG
Trigger: TCCTGGAGCGGTGCGGGGTCATCCCGGAGGTGGAGA...CTGCCAAAGGTGGGGCCTCTCCTGAGAGCCCACCTGTGAGGCCCTCGGAGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319018.12
3UTR-3UTR GCA 90 bp CCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCCGCCCTGCTGAGTCCCTCGGACCCACAGCCCCACGGTaGTGGCCAGCCTCACAGGTG +
Preference number: 2 (lower is better)
Translates to: PSLARTPLVCARPAESLGPTAPR*WPASQV
Trigger: CACCTGTGAGGCTGGCCAGCACCGTGGGGCTGTGGG...TCCGAGGGACTCAGCAGGGCGGGCACAGACCAGTGGAGTCCGGGCTAGAGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp CGGGGTGGTGCCCACTGGAGCTTCCTGTCTGCTCTCCACGCCCAGTGCCTGAGCGGCTCTGCCCTGCACTaGCCTGGACCACGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: RGGAHWSFLSALHAQCLSGSALH*PGPRGC
Trigger: GCAGCCTCGTGGTCCAGGGCAGTGCAGGGCAGAGCC...GCTCAGGCACTGGGCGTGGAGAGCAGACAGGAAGCTCCAGTGGGCACCACCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp TCGCCGCGGGTGGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGAGGCTCCCACTTGCCCACTTCTGCTaGCCCTGCCCCAGCCCCCAC +
Preference number: 2 (lower is better)
Translates to: SPRVGLAQGPFWRKWRLPLAHFC*PCPSPH
Trigger: GTGGGGGCTGGGGCAGGGGCAGCAGAAGTGGGCAAG...TGGGAGCCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp CCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCCGCCCTGCTGAGTCCCTCGGACTTGCCCACTTCTGCTaGCCCTGCCCCAGCCCCCAC +
Preference number: 2 (lower is better)
Translates to: PSLARTPLVCARPAESLGLAHFC*PCPSPH
Trigger: GTGGGGGCTGGGGCAGGGGCAGCAGAAGTGGGCAAG...TCCGAGGGACTCAGCAGGGCGGGCACAGACCAGTGGAGTCCGGGCTAGAGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp GGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTGCCCTGCCCCGTCCCTaGGGCCACCACCTAATTTAT +
Preference number: 2 (lower is better)
Translates to: GPRRTGRSGWPVLSRLGVALPRP*GHHLIY
Trigger: ATAAATTAGGTGGTGGCCGCAGGGACGGGGCAGGGC...AACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR CCA 90 bp GTCCGCTCGCCGCGGGTGGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGAGGGAGGCCTGGGCAGCCTaGGTCCCTACAGCACTGGCA +
Preference number: 2 (lower is better)
Translates to: VRSPRVGLAQGPFWRKWREAWAA*VPTALA
Trigger: TGCCAGTGCTGTAGGGACCCAGGCTGCCCAGGCCTC...CCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGAGCGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp GTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGTGACTGGCTGGAGGGAGGATaGGAAGTGGGCTCCGAGGGC +
Preference number: 2 (lower is better)
Translates to: VPALLSPSETPGPAVPGDWLEGG*EVGSEG
Trigger: GCCCTCGGAGCCCACTTCCCATCCTCCCTCCAGCCA...GTCACCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp TGGGCTCCGAGGGCCTCACAGGTGGGCTCTCAGGAGAGGCCCCACCTTTGGCAGCCTGGGGCTGATGGCTaGGTGATCCCAGGGGGTCCC +
Preference number: 2 (lower is better)
Translates to: WAPRASQVGSQERPHLWQPGADG*VIPGGP
Trigger: GGGACCCCCTGGGATCACCCAGCCATCAGCCCCAGG...CTGCCAAAGGTGGGGCCTCTCCTGAGAGCCCACCTGTGAGGCCCTCGGAGCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp GCGCCTGGCCAGGGCTCCCCTGTGGCTGGCGTGTGGAGACACGTGGGCCCTTCTCCTGTGGCTGGCGTGTaGAGACACGTGGGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: APGQGSPVAGVWRHVGPSPVAGV*RHVGPS
Trigger: AGAAGGGCCCACGTGTCTCCACACGCCAGCCACAGG...AGAAGGGCCCACGTGTCTCCACACGCCAGCCACAGGGGAGCCCTGGCCAGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp AGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCGGGCTGGGCCCTGCAGACCCAAGGCACACGCTCCCCTaGCTGGGCGCCTGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: REELSLSYQAAGLGPADPRHTLP*LGAWPG
Trigger: CCCTGGCCAGGCGCCCAGCCAGGGGAGCGTGTGCCT...TGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAGATAGGCTGAGCTCCTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp TCGCCGCGGGTGGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGAGGCTCCCAACAGCCCCACGGTGCTaGCCAGCCTCACAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: SPRVGLAQGPFWRKWRLPTAPRC*PASQVP
Trigger: GGGCACCTGTGAGGCTGGCCAGCACCGTGGGGCTGT...TGGGAGCCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp CGCCGGCCTGCGGCGCCCGGAGCTGCTGACTGTGTCAGAGCCCGGCTGCCCAGCCCGTTTTGGAGGAAGTaGAGGCTCCCAGGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: RRPAAPGAADCVRARLPSPFWRK*RLPGER
Trigger: CCTTTCTCCTGGGAGCCTCCACTTCCTCCAAAACGG...GCTGGGCAGCCGGGCTCTGACACAGTCAGCAGCTCCGGGCGCCGCAGGCCGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp CGGGGTGGTGCCCACTGGAGCTTCCTGTCTGCTCTCCACGCCCAGTGCCTGAGCCGCCGCGGGTGGGGCTaGCACAAGGCCCGTTTTGGA +
Preference number: 2 (lower is better)
Translates to: RGGAHWSFLSALHAQCLSRRGWG*HKARFG
Trigger: TCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCG...GCTCAGGCACTGGGCGTGGAGAGCAGACAGGAAGCTCCAGTGGGCACCACCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp GCTCCTGCCTGCCTCATGGCCTGCTCCTCTGTCGGGGCCTGTCACCGGGAAACCATCAGGCAGCCGGGCTaGGCCCTGCAGACCCACTGG +
Preference number: 2 (lower is better)
Translates to: APACLMACSSVGACHRETIRQPG*ALQTHW
Trigger: CCAGTGGGTCTGCAGGGCCCAGCCCGGCTGCCTGAT...GGTTTCCCGGTGACAGGCCCCGACAGAGGAGCAGGCCATGAGGCAGGCAGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR TCA 90 bp CGGGGTGGTGCCCACTGGAGCTTCCTGTCTGCTCTCCACGCCCAGTGCCTGAGCAGTGGCTCCTGGGGCTaGTGGCTGGGTGATCCCAGG +
Preference number: 2 (lower is better)
Translates to: RGGAHWSFLSALHAQCLSSGSWG*WLGDPR
Trigger: CCTGGGATCACCCAGCCATCAGCCCCAGGAGCCACT...GCTCAGGCACTGGGCGTGGAGAGCAGACAGGAAGCTCCAGTGGGCACCACCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR TCA 90 bp GCTCCTGCCTGCCTCATGGCCTGCTCCTCTGTCGGGGCCTGTCACCGGGAAACCTGCCCGCTGGTTCTGTaGCCCATCCCAGGCACACGC +
Preference number: 2 (lower is better)
Translates to: APACLMACSSVGACHRETCPLVL*PIPGTR
Trigger: GCGTGTGCCTGGGATGGGTCACAGAACCAGCGGGCA...GGTTTCCCGGTGACAGGCCCCGACAGAGGAGCAGGCCATGAGGCAGGCAGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR TCA 90 bp GTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGTGACCCCGCATGCAGACTCTaGGCAGCAGCCTCCTGTGAC +
Preference number: 2 (lower is better)
Translates to: VPALLSPSETPGPAVPGDPACRL*AAASCD
Trigger: GTCACAGGAGGCTGCTGCTCAGAGTCTGCATGCGGG...GTCACCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR TCA 90 bp GCGCCTGGCCAGGGCTCCCCTGTGGCTGGCGTGTGGAGACACGTGGGCCCTTCTGAAAGGCAGTGGCTGTaGTCGCACAGCCCAGGCTCT +
Preference number: 2 (lower is better)
Translates to: APGQGSPVAGVWRHVGPSERQWL*SHSPGS
Trigger: AGAGCCTGGGCTGTGCGATCACAGCCACTGCCTTTC...AGAAGGGCCCACGTGTCTCCACACGCCAGCCACAGGGGAGCCCTGGCCAGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR TCA 90 bp AGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCGGGCTGGGCCCTGCAGACCCACTGTGCCCGCCCTGCTaGGTCCCTCGGAGACCCCAG +
Preference number: 2 (lower is better)
Translates to: REELSLSYQAAGLGPADPLCPPC*VPRRPQ
Trigger: CTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAG...TGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAGATAGGCTGAGCTCCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp TGTCTGGGAGCAGAGAGCAAAGCGCCCCTGCACAGTGGCCGGAAGCCCGTGGACGCCAGGGCCATCAGGTaGCCTGACCCCCTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: CLGAESKAPLHSGRKPVDARAIR*PDPLAG
Trigger: TCCAGCCAGGGGGTCAGGGCACCTGATGGCCCTGGC...GTCCACGGGCTTCCGGCCACTGTGCAGGGGCGCTTTGCTCTCTGCTCCCAGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR GCA 90 bp ACCACGAGGCTGCCCACCCCAGACAGGTGGGACCCCTTTCCCGCATGCAGACTCGCCAGGGCCATCAGGTaGCCTGACCCCCTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: TTRLPTPDRWDPFPACRLARAIR*PDPLAG
Trigger: TCCAGCCAGGGGGTCAGGGCACCTGATGGCCCTGGC...GAGTCTGCATGCGGGAAAGGGGTCCCACCTGTCTGGGGTGGGCAGCCTCGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp GCTCCTGCCTGCCTCATGGCCTGCTCCTCTGTCGGGGCCTGTCACCGGGAAACCTCCGATTGGCTCAGGTaGCCTCTCCTGCGGTGGCGG +
Preference number: 2 (lower is better)
Translates to: APACLMACSSVGACHRETSDWLR*PLLRWR
Trigger: CCGCCACCGCAGGAGAGGGCACCTGAGCCAATCGGA...GGTTTCCCGGTGACAGGCCCCGACAGAGGAGCAGGCCATGAGGCAGGCAGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp GCTCCTGCCTGCCTCATGGCCTGCTCCTCTGTCGGGGCCTGTCACCGGGAAACCACCCCCACCGCGTCCTaGTCCTCAGGCTCATGCCCT +
Preference number: 2 (lower is better)
Translates to: APACLMACSSVGACHRETTPTAS*SSGSCP
Trigger: AGGGCATGAGCCTGAGGAGCAGGACGCGGTGGGGGT...GGTTTCCCGGTGACAGGCCCCGACAGAGGAGCAGGCCATGAGGCAGGCAGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp TCAGTCTCTGAGGGTCAGGCCGCAGTCCTGAGTGTCCCCATCTGCCCCACCCGGTCCCTCCCGCTCACATaGGCCCACGCTCCCCCTCGA +
Preference number: 2 (lower is better)
Translates to: SVSEGQAAVLSVPICPTRSLPLT*AHAPPR
Trigger: TCGAGGGGGAGCGTGGGCGCATGTGAGCGGGAGGGA...CCGGGTGGGGCAGATGGGGACACTCAGGACTGCGGCCTGACCCTCAGAGACTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR CCA 90 bp GTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGTGACCCTGTGGCTGGCGTGTaGAGACACGTGGGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: VPALLSPSETPGPAVPGDPVAGV*RHVGPS
Trigger: AGAAGGGCCCACGTGTCTCCACACGCCAGCCACAGG...GTCACCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp ACCACGAGGCTGCCCACCCCAGACAGGTGGGACCCCTTTCCCGCATGCAGACTCGGGCTCCCCTGTGGCTaGCGTGTGGAGACACGTGGG +
Preference number: 2 (lower is better)
Translates to: TTRLPTPDRWDPFPACRLGLPCG*RVETRG
Trigger: CCCACGTGTCTCCACACGCCAGCCACAGGGGAGCCC...GAGTCTGCATGCGGGAAAGGGGTCCCACCTGTCTGGGGTGGGCAGCCTCGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp ACCTCAGGCAACTTGCTCCGTCTCTCTGGGCTCGGTCGCTGTCCCAGCTGGCTTAGGCACACGCTCCCCTaGCTGGGCGCCTGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: TSGNLLRLSGLGRCPSWLRHTLP*LGAWPG
Trigger: CCCTGGCCAGGCGCCCAGCCAGGGGAGCGTGTGCCT...AAGCCAGCTGGGACAGCGACCGAGCCCAGAGAGACGGAGCAAGTTGCCTGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp GCTCCTGCCTGCCTCATGGCCTGCTCCTCTGTCGGGGCCTGTCACCGGGAAACCCCCACCCCAGACAGGTaGGACCCCTTTCCCGCATGC +
Preference number: 2 (lower is better)
Translates to: APACLMACSSVGACHRETPTPDR*DPFPAC
Trigger: GCATGCGGGAAAGGGGTCCCACCTGTCTGGGGTGGG...GGTTTCCCGGTGACAGGCCCCGACAGAGGAGCAGGCCATGAGGCAGGCAGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp CCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCCGCCCTGCTGAGTCCCTCGGACCCACCCCAGACAGGTaGGACCCCTTTCCCGCATGC +
Preference number: 2 (lower is better)
Translates to: PSLARTPLVCARPAESLGPTPDR*DPFPAC
Trigger: GCATGCGGGAAAGGGGTCCCACCTGTCTGGGGTGGG...TCCGAGGGACTCAGCAGGGCGGGCACAGACCAGTGGAGTCCGGGCTAGAGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp ACCTCAGGCAACTTGCTCCGTCTCTCTGGGCTCGGTCGCTGTCCCAGCTGGCTTTCCGCTCGCCGCGGGTaGGGCTGGCACAAGGCCCGT +
Preference number: 2 (lower is better)
Translates to: TSGNLLRLSGLGRCPSWLSARRG*GWHKAR
Trigger: ACGGGCCTTGTGCCAGCCCCACCCGCGGCGAGCGGA...AAGCCAGCTGGGACAGCGACCGAGCCCAGAGAGACGGAGCAAGTTGCCTGAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp AGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCGGGCTGGGCCCTGCAGACCCAAGGCAGGTGCCCAGGTaGGAGCCCCCTCTGTGCCCC +
Preference number: 2 (lower is better)
Translates to: REELSLSYQAAGLGPADPRQVPR*EPPLCP
Trigger: GGGGCACAGAGGGGGCTCCCACCTGGGCACCTGCCT...TGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAGATAGGCTGAGCTCCTCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CAA 90 bp GTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCTGCAGTGCTTaGCTGGAGAAGGGACTCCCTGGTCCCCAGGGTGGACGGAGCCGC +
Preference number: 2 (lower is better)
Translates to: VLWAVGFYLPLACSA*LEKGLPGPQGGRSR
Trigger: GCGGCTCCGTCCACCCTGGGGACCAGGGAGTCCCTTCTCCAGCAAAGCACTGCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR CAA 90 bp GGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTaGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGG +
Preference number: 2 (lower is better)
Translates to: GQAAAGGRFCPVLGF*VSTSCGPWASTCPW
Trigger: CCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR TCA 90 bp GGGGTTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCTCCCGCTGTTCCTGGTaGCCGTGGCCATGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: GVLGVHVLWAVGFYLPLASRCSW*PWPWVG
Trigger: CCCCACCCATGGCCACGGTCACCAGGAACAGCGGGA...GGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR TCA 90 bp GCGGCTACTGTTCTTGCGGCCGCGATTTCCGAGGCCACTTGCACGCCTCCAGCTGACCTGCTGACAGAGTaGGACACGGGGGCCGCCTGG +
Preference number: 2 (lower is better)
Translates to: AATVLAAAISEATCTPPADLLTE*DTGAAW
Trigger: CCAGGCGGCCCCCGTGTCTCACTCTGTCAGCAGGTC...AGCTGGAGGCGTGCAAGTGGCCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR TCA 90 bp TCAGTCTCTGAGGGTCAGGCCGCAGTCCTGAGTGTCCCCATCTGCCCCACCCGGCAGACGGGGAAGCTGTaGAAGGAGACACCGCCCCGC +
Preference number: 2 (lower is better)
Translates to: SVSEGQAAVLSVPICPTRQTGKL*KETPPR
Trigger: GCGGGGCGGTGTCTCCTTTCACAGCTTCCCCGTCTG...CCGGGTGGGGCAGATGGGGACACTCAGGACTGCGGCCTGACCCTCAGAGACTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR GCA 90 bp ACCTCAGGCAACTTGCTCCGTCTCTCTGGGCTCGGTCGCTGTCCCAGCTGGCTTCTCCCATGGGGTCCGTaGAGCCAAGGCCCCGCAGCC +
Preference number: 2 (lower is better)
Translates to: TSGNLLRLSGLGRCPSWLLPWGP*SQGPAA
Trigger: GGCTGCGGGGCCTTGGCTGCACGGACCCCATGGGAG...AAGCCAGCTGGGACAGCGACCGAGCCCAGAGAGACGGAGCAAGTTGCCTGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp AGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCGGGCTGGGCCCTGCAGACCCAGGCTCTGCCCTGCACTaGCCTGGACCACGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: REELSLSYQAAGLGPADPGSALH*PGPRGC
Trigger: GCAGCCTCGTGGTCCAGGGCAGTGCAGGGCAGAGCC...TGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAGATAGGCTGAGCTCCTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp TGTGGAGACACGTGGGCCCTTCTCCACGTGCCCACGAGGGCCGTAGCAGGCTCCAGGTACTCAGGGCCCTaGCTTCGTGGCCTTGTCCGC +
Preference number: 2 (lower is better)
Translates to: CGDTWALLHVPTRAVAGSRYSGP*LRGLVR
Trigger: GCGGACAAGGCCACGAAGGCAGGGCCCTGAGTACCT...GGAGCCTGCTACGGCCCTCGTGGGCACGTGGAGAAGGGCCCACGTGTCTCCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp GTCCGCTCGCCGCGGGTGGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGAGGGAACTGACTGCCACCTaGAGGCCGGGTCACCGTACT +
Preference number: 2 (lower is better)
Translates to: VRSPRVGLAQGPFWRKWRELTAT*RPGHRT
Trigger: AGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTC...CCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGAGCGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp AGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCGGGCTGGGCCCTGCAGACCCACCCCCACCCAACCTGTaGTGCGGGCCCCAGACACAC +
Preference number: 2 (lower is better)
Translates to: REELSLSYQAAGLGPADPPPPNL*CGPQTH
Trigger: GTGTGTCTGGGGCCCGCAGCACAGGTTGGGTGGGGG...TGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAGATAGGCTGAGCTCCTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp GTCTGTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGCTGGAGCTTCCTGTCTaGTCTCCACGCCCAGTGCCT +
Preference number: 2 (lower is better)
Translates to: VCARPAESLGDPRSRCSWLELPV*SPRPVP
Trigger: AGGCACTGGGCGTGGAGAGCAGACAGGAAGCTCCAG...CCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp AAGCAAGAGGCTGGGAGCTGGCCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCGCGGTCCCGGGGTGGTaGCCACTGGAGCTTCCTGTC +
Preference number: 2 (lower is better)
Translates to: KQEAGSWPSLARTPLVCAAVPGW*PLELPV
Trigger: GACAGGAAGCTCCAGTGGGCACCACCCCGGGACCGC...GGCACAGACCAGTGGAGTCCGGGCTAGAGAGGGCCAGCTCCCAGCCTCTTGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp GCGGTGTCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGCGGTCCCGGGGTGGTaGCCACTGGAGCTTCCTGTC +
Preference number: 2 (lower is better)
Translates to: AVSGSPEREPSATHPPNAAVPGW*PLELPV
Trigger: GACAGGAAGCTCCAGTGGGCACCACCCCGGGACCGC...TGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGACACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp CGGGGTGGTGCCCACTGGAGCTTCCTGTCTGCTCTCCACGCCCAGTGCCTGAGCACAGGTGGGCGTCTTTaGAGCCGTGCAGGGAGGAGC +
Preference number: 2 (lower is better)
Translates to: RGGAHWSFLSALHAQCLSTGGRL*SRAGRS
Trigger: GCTCCTCCCTGCACGGCTGCAAAGACGCCCACCTGT...GCTCAGGCACTGGGCGTGGAGAGCAGACAGGAAGCTCCAGTGGGCACCACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp GTCTGTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGCCAGGCTCTTCCGATTaGCTCAGGTGCCCTCTCCTG +
Preference number: 2 (lower is better)
Translates to: VCARPAESLGDPRSRCSWPGSSD*LRCPLL
Trigger: CAGGAGAGGGCACCTGAGCCAATCGGAAGAGCCTGG...CCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp TGTGGAGACACGTGGGCCCTTCTCCACGTGCCCACGAGGGCCGTAGCAGGCTCCTCCAGCTGCCCAGCCTaGGATCCGTCCGCTGTCTGT +
Preference number: 2 (lower is better)
Translates to: CGDTWALLHVPTRAVAGSSSCPA*DPSAVC
Trigger: ACAGACAGCGGACGGATCCCAGGCTGGGCAGCTGGA...GGAGCCTGCTACGGCCCTCGTGGGCACGTGGAGAAGGGCCCACGTGTCTCCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp AGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCGGGCTGGGCCCTGCAGACCCAGCCAGGGCTCCCCTGTaGCTGGCGTGTGGAGACACG +
Preference number: 2 (lower is better)
Translates to: REELSLSYQAAGLGPADPARAPL*LACGDT
Trigger: CGTGTCTCCACACGCCAGCCACAGGGGAGCCCTGGC...TGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAGATAGGCTGAGCTCCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp GGGGTTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCCGCCGCGGGTGGGGCTaGCACAAGGCCCGTTTTGGA +
Preference number: 2 (lower is better)
Translates to: GVLGVHVLWAVGFYLPLARRGWG*HKARFG
Trigger: TCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCG...GGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR CCA 90 bp CCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCCGCCCTGCTGAGTCCCTCGGACGGGGTGGTGCCCACTaGAGCTTCCTGTCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: PSLARTPLVCARPAESLGRGGAH*SFLSAL
Trigger: GAGAGCAGACAGGAAGCTCCAGTGGGCACCACCCCG...TCCGAGGGACTCAGCAGGGCGGGCACAGACCAGTGGAGTCCGGGCTAGAGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR TCA 90 bp GCGGTGTCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAAGTGGCTCCTGGGGCTaGTGGCTGGGTGATCCCAGG +
Preference number: 2 (lower is better)
Translates to: AVSGSPEREPSATHPPNASGSWG*WLGDPR
Trigger: CCTGGGATCACCCAGCCATCAGCCCCAGGAGCCACT...TGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGACACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR TCA 90 bp TCGCCGCGGGTGGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGAGGCTCCCAGAAAGGCAGTGGCTGTaGTCGCACAGCCCAGGCTCT +
Preference number: 2 (lower is better)
Translates to: SPRVGLAQGPFWRKWRLPERQWL*SHSPGS
Trigger: AGAGCCTGGGCTGTGCGATCACAGCCACTGCCTTTC...TGGGAGCCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR TCA 90 bp AAGCAAGAGGCTGGGAGCTGGCCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCTCCCTGGGGACCTGCTaGCAGAGTGAGACACGGGGG +
Preference number: 2 (lower is better)
Translates to: KQEAGSWPSLARTPLVCASLGTC*QSETRG
Trigger: CCCCCGTGTCTCACTCTGTCAGCAGGTCCCCAGGGA...GGCACAGACCAGTGGAGTCCGGGCTAGAGAGGGCCAGCTCCCAGCCTCTTGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCGCGGGCCCACCTGGGTaGCTGCCAGGGCCATCAGGT +
Preference number: 2 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSAGPPG*LPGPSG
Trigger: ACCTGATGGCCCTGGCAGGCACCCAGGTGGGCCCGC...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp AGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCGGGCTGGGCCCTGCAGACCCAACCCCCACCGCGTCCTaGTCCTCAGGCTCATGCCCT +
Preference number: 2 (lower is better)
Translates to: REELSLSYQAAGLGPADPTPTAS*SSGSCP
Trigger: AGGGCATGAGCCTGAGGAGCAGGACGCGGTGGGGGT...TGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAGATAGGCTGAGCTCCTCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp ACCTCAGGCAACTTGCTCCGTCTCTCTGGGCTCGGTCGCTGTCCCAGCTGGCTTCCTGGACCACGAGGCTaGCCACCCCAGACAGGTGGG +
Preference number: 2 (lower is better)
Translates to: TSGNLLRLSGLGRCPSWLPGPRG*PPQTGG
Trigger: CCCACCTGTCTGGGGTGGGCAGCCTCGTGGTCCAGG...AAGCCAGCTGGGACAGCGACCGAGCCCAGAGAGACGGAGCAAGTTGCCTGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp GCGGCTACTGTTCTTGCGGCCGCGATTTCCGAGGCCACTTGCACGCCTCCAGCTGAGGCCTGGGCAGCCTaGGTCCCTACAGCACTGGCA +
Preference number: 2 (lower is better)
Translates to: AATVLAAAISEATCTPPAEAWAA*VPTALA
Trigger: TGCCAGTGCTGTAGGGACCCAGGCTGCCCAGGCCTC...AGCTGGAGGCGTGCAAGTGGCCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp TCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGGGTGGCGGGCCCACCTaGGTGCCTGCCAGGGCCATC +
Preference number: 2 (lower is better)
Translates to: SGSPEREPSATHPPNADLGGGPT*VPARAI
Trigger: GATGGCCCTGGCAGGCACCCAGGTGGGCCCGCCACC...CAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp GGGCCCCAGACACACAGAACTGACTGCCACCTGCAGGCCGGGTCACCGTACTGTCTCTCCGCCCCACAGTaGCTCCTGGGGCTGATGGCT +
Preference number: 2 (lower is better)
Translates to: GPQTHRTDCHLQAGSPYCLSAPQ*LLGLMA
Trigger: AGCCATCAGCCCCAGGAGCCACTGTGGGGCGGAGAG...ACAGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGTCTGGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp AAGCAAGAGGCTGGGAGCTGGCCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCGCGTGTGGAGACACGTaGGCCCTTCTCCACGTGCCC +
Preference number: 2 (lower is better)
Translates to: KQEAGSWPSLARTPLVCAACGDT*ALLHVP
Trigger: GGGCACGTGGAGAAGGGCCCACGTGTCTCCACACGC...GGCACAGACCAGTGGAGTCCGGGCTAGAGAGGGCCAGCTCCCAGCCTCTTGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp TCCTCGGCTGGTCTGAGGGGGCATTTGGCGGAAACTGACTTCTCCCCTGTCCTATCCGCTCGCCGCGGGTaGGGCTGGCACAAGGCCCGT +
Preference number: 2 (lower is better)
Translates to: SSAGLRGHLAETDFSPVLSARRG*GWHKAR
Trigger: ACGGGCCTTGTGCCAGCCCCACCCGCGGCGAGCGGA...TAGGACAGGGGAGAAGTCAGTTTCCGCCAAATGCCCCCTCAGACCAGCCGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp ACCGCGTCCTGCTCCTCAGGCTCATGCCCTGCGGGAACAGAAGCCAAGACCCGGACCCAGGGCCCCACCTaGCACGTGGAGGAAGAAGAG +
Preference number: 2 (lower is better)
Translates to: TASCSSGSCPAGTEAKTRTQGPT*HVEEEE
Trigger: CTCTTCTTCCTCCACGTGCCAGGTGGGGCCCTGGGT...CCGGGTCTTGGCTTCTGTTCCCGCAGGGCATGAGCCTGAGGAGCAGGACGCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CAA 90 bp CCGGCTGCCTGGTGTCCAAGTCCCTGCTCTGTGACCTCAGGCAACTaGCTCCGTCTCTCTGGGCTCGGTCGCTGTCCCAGCTGGCTTGAG +
Preference number: 2 (lower is better)
Translates to: PAAWCPSPCSVTSGN*LRLSGLGRCPSWLE
Trigger: CTCAAGCCAGCTGGGACAGCGACCGAGCCCAGAGAGACGGAGCAAGTTGCCTGAGGTCACAGAGCAGGGACTTGGACACCAGGCAGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR TCA 90 bp GGGGTTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCGGCCTGAGGTGTTGCTaGCATAGGGGCTCAGCCCCT +
Preference number: 2 (lower is better)
Translates to: GVLGVHVLWAVGFYLPLAGLRCC*HRGSAP
Trigger: AGGGGCTGAGCCCCTATGTCAGCAACACCTCAGGCC...GGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR TCA 90 bp GTCTGTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGCCTAAAGTGCAGGCCTaGGGTGTTGCTGACATAGGG +
Preference number: 2 (lower is better)
Translates to: VCARPAESLGDPRSRCSWPKVQA*GVADIG
Trigger: CCCTATGTCAGCAACACCTCAGGCCTGCACTTTAGG...CCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp TCCTCGGCTGGTCTGAGGGGGCATTTGGCGGAAACTGACTTCTCCCCTGTCCTAGCGGGCCCACCTGGGTaGCTGCCAGGGCCATCAGGT +
Preference number: 2 (lower is better)
Translates to: SSAGLRGHLAETDFSPVLAGPPG*LPGPSG
Trigger: ACCTGATGGCCCTGGCAGGCACCCAGGTGGGCCCGC...TAGGACAGGGGAGAAGTCAGTTTCCGCCAAATGCCCCCTCAGACCAGCCGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp AGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCACTCCCATGGGGTCCGTaGAGCCAAGGCCCCGCAGCC +
Preference number: 2 (lower is better)
Translates to: RWASLQPCREELSLSYQALPWGP*SQGPAA
Trigger: GGCTGCGGGGCCTTGGCTGCACGGACCCCATGGGAG...TGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp AGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCGGGCTGGGCCCTGCAGACCCAAGGTACTCAGGGCCCTaGCTTCGTGGCCTTGTCCGC +
Preference number: 2 (lower is better)
Translates to: REELSLSYQAAGLGPADPRYSGP*LRGLVR
Trigger: GCGGACAAGGCCACGAAGGCAGGGCCCTGAGTACCT...TGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAGATAGGCTGAGCTCCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp TCCTCGGCTGGTCTGAGGGGGCATTTGGCGGAAACTGACTTCTCCCCTGTCCTATGGGAGCCCCCTCTGTaGCCCCTGGGAGTGTCCCCC +
Preference number: 2 (lower is better)
Translates to: SSAGLRGHLAETDFSPVLWEPPL*PLGVSP
Trigger: GGGGGACACTCCCAGGGGGCACAGAGGGGGCTCCCA...TAGGACAGGGGAGAAGTCAGTTTCCGCCAAATGCCCCCTCAGACCAGCCGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp GCTCCTGCCTGCCTCATGGCCTGCTCCTCTGTCGGGGCCTGTCACCGGGAAACCATTTCCGAGGCCACTTaGACGCCTCCAGCTTCCTGC +
Preference number: 2 (lower is better)
Translates to: APACLMACSSVGACHRETISEAT*TPPASC
Trigger: GCAGGAAGCTGGAGGCGTGCAAGTGGCCTCGGAAAT...GGTTTCCCGGTGACAGGCCCCGACAGAGGAGCAGGCCATGAGGCAGGCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp CGGGGTGGTGCCCACTGGAGCTTCCTGTCTGCTCTCCACGCCCAGTGCCTGAGCGCCAGCAGCAGCCCTTaGCAGAACGACAGGAAGATG +
Preference number: 2 (lower is better)
Translates to: RGGAHWSFLSALHAQCLSASSSP*QNDRKM
Trigger: CATCTTCCTGTCGTTCTGGCAAGGGCTGCTGCTGGC...GCTCAGGCACTGGGCGTGGAGAGCAGACAGGAAGCTCCAGTGGGCACCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319018.12
3UTR-3UTR CCA 90 bp GCGGTGTCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGAGAGGCCCCACCTTTaGCAGGAGTTGGTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: AVSGSPEREPSATHPPNAERPHL*QELVGG
Trigger: CCCACCCACCAACTCCTGCCAAAGGTGGGGCCTCTC...TGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGACACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp AAGCAAGAGGCTGGGAGCTGGCCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCTCCAGCTGCCCAGCCTaGGATCCGTCCGCTGTCTGT +
Preference number: 2 (lower is better)
Translates to: KQEAGSWPSLARTPLVCASSCPA*DPSAVC
Trigger: ACAGACAGCGGACGGATCCCAGGCTGGGCAGCTGGA...GGCACAGACCAGTGGAGTCCGGGCTAGAGAGGGCCAGCTCCCAGCCTCTTGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp GCTCCTGCCTGCCTCATGGCCTGCTCCTCTGTCGGGGCCTGTCACCGGGAAACCGCACAAGGCCCGTTTTaGAGGAAGTGGAGGCTCCCA +
Preference number: 2 (lower is better)
Translates to: APACLMACSSVGACHRETAQGPF*RKWRLP
Trigger: TGGGAGCCTCCACTTCCTCCAAAACGGGCCTTGTGC...GGTTTCCCGGTGACAGGCCCCGACAGAGGAGCAGGCCATGAGGCAGGCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp TCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGGGCCCTGCCTTCGTaGCCTTGTCCGCTCGCCGCG +
Preference number: 2 (lower is better)
Translates to: SGSPEREPSATHPPNADLRALPS*PCPLAA
Trigger: CGCGGCGAGCGGACAAGGCCACGAAGGCAGGGCCCT...CAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp GCGGCTACTGTTCTTGCGGCCGCGATTTCCGAGGCCACTTGCACGCCTCCAGCTCAAGAGGCTGGGAGCTaGCCCTCTCTAGCCCGGACT +
Preference number: 2 (lower is better)
Translates to: AATVLAAAISEATCTPPAQEAGS*PSLART
Trigger: AGTCCGGGCTAGAGAGGGCCAGCTCCCAGCCTCTTG...AGCTGGAGGCGTGCAAGTGGCCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp TGTCTGGGAGCAGAGAGCAAAGCGCCCCTGCACAGTGGCCGGAAGCCCGTGGACCAGACCCACTGGCCTTaGATCCCCATGTCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: CLGAESKAPLHSGRKPVDQTHWP*IPMSSA
Trigger: GGCTGAGGACATGGGGATCCAAGGCCAGTGGGTCTG...GTCCACGGGCTTCCGGCCACTGTGCAGGGGCGCTTTGCTCTCTGCTCCCAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR CCA 90 bp AGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCGGGCTGGGCCCTGCAGACCCAGCCCTGCAGACCCACTaGCCTTGGATCCCCATGTCC +
Preference number: 2 (lower is better)
Translates to: REELSLSYQAAGLGPADPALQTH*PWIPMS
Trigger: GGACATGGGGATCCAAGGCCAGTGGGTCTGCAGGGC...TGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAGATAGGCTGAGCTCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp GGGCCCCAGACACACAGAACTGACTGCCACCTGCAGGCCGGGTCACCGTACTGTACGGGGGCCGCCTGGTaGGTCTATTCCTGTGGGGAT +
Preference number: 2 (lower is better)
Translates to: GPQTHRTDCHLQAGSPYCTGAAW*VYSCGD
Trigger: ATCCCCACAGGAATAGACCCACCAGGCGGCCCCCGT...ACAGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGTCTGGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp GGGCCCCAGACACACAGAACTGACTGCCACCTGCAGGCCGGGTCACCGTACTGTTCGGCAGCAGGTCCCTaGGGACCTGCTGACAGAGTG +
Preference number: 2 (lower is better)
Translates to: GPQTHRTDCHLQAGSPYCSAAGP*GPADRV
Trigger: CACTCTGTCAGCAGGTCCCCAGGGACCTGCTGCCGA...ACAGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGTCTGGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp GGGCCCCAGACACACAGAACTGACTGCCACCTGCAGGCCGGGTCACCGTACTGTAACTTGAGGACGGGCTaGAAGGGCCGCAGGAGCTCC +
Preference number: 2 (lower is better)
Translates to: GPQTHRTDCHLQAGSPYCNLRTG*KGRRSS
Trigger: GGAGCTCCTGCGGCCCTTCCAGCCCGTCCTCAAGTT...ACAGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGTCTGGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319018.12
3UTR CAA 90 bp TGTGTCCTCCCAGAAGCCCCCTTAGTCCCTGGGCGGCTACTGTTCTaGCGGCCGCGATTTCCGAGGCCACTTGCACGCCTCCAGCTTCCT +
Preference number: 2 (lower is better)
Translates to: CVLPEAPLVPGRLLF*RPRFPRPLARLQLP
Trigger: AGGAAGCTGGAGGCGTGCAAGTGGCCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGCCCAGGGACTAAGGGGGCTTCTGGGAGGACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CAA 90 bp GGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACGTCTaGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCTGCAGTGCTTTG +
Preference number: 2 (lower is better)
Translates to: GWPVLSRLGVLGVHV*WAVGFYLPLACSAL
Trigger: CAAAGCACTGCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR TCA 90 bp ACCACGAGGCTGCCCACCCCAGACAGGTGGGACCCCTTTCCCGCATGCAGACTCCTGAACCAGGGAGTCTaGCCCACTCACAGCTCCCAT +
Preference number: 2 (lower is better)
Translates to: TTRLPTPDRWDPFPACRLLNQGV*PTHSSH
Trigger: ATGGGAGCTGTGAGTGGGTCAGACTCCCTGGTTCAG...GAGTCTGCATGCGGGAAAGGGGTCCCACCTGTCTGGGGTGGGCAGCCTCGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR TCA 90 bp GCGGCTACTGTTCTTGCGGCCGCGATTTCCGAGGCCACTTGCACGCCTCCAGCTCCGCTGTCTGTCTCCTaGACCAGGGAGTCTGACCCA +
Preference number: 2 (lower is better)
Translates to: AATVLAAAISEATCTPPAPLSVS*TRESDP
Trigger: TGGGTCAGACTCCCTGGTTCAGGAGACAGACAGCGG...AGCTGGAGGCGTGCAAGTGGCCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR TCA 90 bp ACCTCAGGCAACTTGCTCCGTCTCTCTGGGCTCGGTCGCTGTCCCAGCTGGCTTCCCGCATGCAGACTCTaGGCAGCAGCCTCCTGTGAC +
Preference number: 2 (lower is better)
Translates to: TSGNLLRLSGLGRCPSWLPACRL*AAASCD
Trigger: GTCACAGGAGGCTGCTGCTCAGAGTCTGCATGCGGG...AAGCCAGCTGGGACAGCGACCGAGCCCAGAGAGACGGAGCAAGTTGCCTGAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR TCA 90 bp CTCAGGGCTTTCCTTCGAGTCGTGTTGGAAAGAAGCAGAAGCAGCCTCACCCGTCACCGTACTGTCCCCTaGCGGGCCCTGGGCCTGGGG +
Preference number: 2 (lower is better)
Translates to: LRAFLRVVLERSRSSLTRHRTVP*RALGLG
Trigger: CCCCAGGCCCAGGGCCCGTCAGGGGACAGTACGGTG...ACGGGTGAGGCTGCTTCTGCTTCTTTCCAACACGACTCGAAGGAAAGCCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR TCA 90 bp TCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGGACCTGCTGACAGAGTaGGACACGGGGGCCGCCTGG +
Preference number: 2 (lower is better)
Translates to: SGSPEREPSATHPPNADLDLLTE*DTGAAW
Trigger: CCAGGCGGCCCCCGTGTCTCACTCTGTCAGCAGGTC...CAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR TCA 90 bp CCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCCGCCCTGCTGAGTCCCTCGGACGGAGGCGTTGTAGATaGGGGTCACATAGAGGTAGC +
Preference number: 2 (lower is better)
Translates to: PSLARTPLVCARPAESLGRRRCR*GSHRGS
Trigger: GCTACCTCTATGTGACCCTCATCTACAACGCCTCCG...TCCGAGGGACTCAGCAGGGCGGGCACAGACCAGTGGAGTCCGGGCTAGAGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319018.12
3UTR-3UTR TCA 90 bp GGCCTGCTTACAGAAGCGCAGGAACCCGATGGAGTAGGTCATGCCCCGGAGGCACACGAATCTCAGCCATaGTGGCGCCCTCGCCTCCCA +
Preference number: 2 (lower is better)
Translates to: GLLTEAQEPDGVGHAPEAHESQP*WRPRLP
Trigger: TGGGAGGCGAGGGCGCCATCATGGCTGAGATTCGTG...TGCCTCCGGGGCATGACCTACTCCATCGGGTTCCTGCGCTTCTGTAAGCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421923.5
3UTR-3UTR GCA 90 bp GGGGTTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCGAACTGACTGCCACCTaGAGGCCGGGTCACCGTACT +
Preference number: 2 (lower is better)
Translates to: GVLGVHVLWAVGFYLPLAELTAT*RPGHRT
Trigger: AGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTC...GGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR GCA 90 bp TGTCTGGGAGCAGAGAGCAAAGCGCCCCTGCACAGTGGCCGGAAGCCCGTGGACACACACAGAACTGACTaGCACCTGCAGGCCGGGTCA +
Preference number: 2 (lower is better)
Translates to: CLGAESKAPLHSGRKPVDTHRTD*HLQAGS
Trigger: TGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGT...GTCCACGGGCTTCCGGCCACTGTGCAGGGGCGCTTTGCTCTCTGCTCCCAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR GCA 90 bp AAGCAAGAGGCTGGGAGCTGGCCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCCTGGAGCTTCCTGTCTaGTCTCCACGCCCAGTGCCT +
Preference number: 2 (lower is better)
Translates to: KQEAGSWPSLARTPLVCALELPV*SPRPVP
Trigger: AGGCACTGGGCGTGGAGAGCAGACAGGAAGCTCCAG...GGCACAGACCAGTGGAGTCCGGGCTAGAGAGGGCCAGCTCCCAGCCTCTTGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp AGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCGGGCTGGGCCCTGCAGACCCAGCGTCTTTGCAGCCGTaGAGGGAGGAGCTCAGCCTA +
Preference number: 2 (lower is better)
Translates to: REELSLSYQAAGLGPADPASLQP*REELSL
Trigger: TAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGC...TGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAGATAGGCTGAGCTCCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp AGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCAGGGCTCCCCTGTGGCTaGCGTGTGGAGACACGTGGG +
Preference number: 2 (lower is better)
Translates to: RWASLQPCREELSLSYQAGLPCG*RVETRG
Trigger: CCCACGTGTCTCCACACGCCAGCCACAGGGGAGCCC...TGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp AGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCAGGGCTCCCCTGTaGCTGGCGTGTGGAGACACG +
Preference number: 2 (lower is better)
Translates to: RWASLQPCREELSLSYQAARAPL*LACGDT
Trigger: CGTGTCTCCACACGCCAGCCACAGGGGAGCCCTGGC...TGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp AGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCGGGCTGGGCCCTGCAGACCCACTCACAGGTGCCCGCTaGTTCTGTGACCCATCCCAG +
Preference number: 2 (lower is better)
Translates to: REELSLSYQAAGLGPADPLTGAR*FCDPSQ
Trigger: CTGGGATGGGTCACAGAACCAGCGGGCACCTGTGAG...TGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAGATAGGCTGAGCTCCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp TGTGGAGACACGTGGGCCCTTCTCCACGTGCCCACGAGGGCCGTAGCAGGCTCCCCGTTTTGGAGGAAGTaGAGGCTCCCAGGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: CGDTWALLHVPTRAVAGSPFWRK*RLPGER
Trigger: CCTTTCTCCTGGGAGCCTCCACTTCCTCCAAAACGG...GGAGCCTGCTACGGCCCTCGTGGGCACGTGGAGAAGGGCCCACGTGTCTCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp ACCTCAGGCAACTTGCTCCGTCTCTCTGGGCTCGGTCGCTGTCCCAGCTGGCTTACCCAGGGCCCCACCTaGCACGTGGAGGAAGAAGAG +
Preference number: 2 (lower is better)
Translates to: TSGNLLRLSGLGRCPSWLTQGPT*HVEEEE
Trigger: CTCTTCTTCCTCCACGTGCCAGGTGGGGCCCTGGGT...AAGCCAGCTGGGACAGCGACCGAGCCCAGAGAGACGGAGCAAGTTGCCTGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp TGCCTGTCCCTCACCGGGGTCAGGATCCGGGCACTACGTGTAAGTGGCTTTCCCGCCCTGCAGACCCACTaGCCTTGGATCCCCATGTCC +
Preference number: 2 (lower is better)
Translates to: CLSLTGVRIRALRVSGFPALQTH*PWIPMS
Trigger: GGACATGGGGATCCAAGGCCAGTGGGTCTGCAGGGC...GGGAAAGCCACTTACACGTAGTGCCCGGATCCTGACCCCGGTGAGGGACAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR CCA 90 bp TGCCTGTCCCTCACCGGGGTCAGGATCCGGGCACTACGTGTAAGTGGCTTTCCCAGCCCAGGCGGTGTCTaGGTCTCCAGAAAGGGAGCC +
Preference number: 2 (lower is better)
Translates to: CLSLTGVRIRALRVSGFPSPGGV*VSRKGA
Trigger: GGCTCCCTTTCTGGAGACCCAGACACCGCCTGGGCT...GGGAAAGCCACTTACACGTAGTGCCCGGATCCTGACCCCGGTGAGGGACAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR CCA 90 bp GGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTGTTTCTTGTGGATGCTaGGGATTTTCAGCTGGACCA +
Preference number: 2 (lower is better)
Translates to: GPRRTGRSGWPVLSRLGVVSCGC*GFSAGP
Trigger: TGGTCCAGCTGAAAATCCCCAGCATCCACAAGAAAC...AACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR CCA 90 bp GGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTTTCCACCGTTTCTTGTaGATGCTGGGGATTTTCAGC +
Preference number: 2 (lower is better)
Translates to: GPRRTGRSGWPVLSRLGVFHRFL*MLGIFS
Trigger: GCTGAAAATCCCCAGCATCCACAAGAAACGGTGGAA...AACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR TCA 90 bp AGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCGGGCTGGGCCCTGCAGACCCACTGAACCAGGGAGTCTaGCCCACTCACAGCTCCCAT +
Preference number: 2 (lower is better)
Translates to: REELSLSYQAAGLGPADPLNQGV*PTHSSH
Trigger: ATGGGAGCTGTGAGTGGGTCAGACTCCCTGGTTCAG...TGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAGATAGGCTGAGCTCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp TGCCTGTCCCTCACCGGGGTCAGGATCCGGGCACTACGTGTAAGTGGCTTTCCCTGCTCCTCAGGCTCATaGCCTGCGGGAACAGAAGCC +
Preference number: 2 (lower is better)
Translates to: CLSLTGVRIRALRVSGFPCSSGS*PAGTEA
Trigger: GGCTTCTGTTCCCGCAGGGCATGAGCCTGAGGAGCA...GGGAAAGCCACTTACACGTAGTGCCCGGATCCTGACCCCGGTGAGGGACAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR GCA 90 bp CTCAGGGCTTTCCTTCGAGTCGTGTTGGAAAGAAGCAGAAGCAGCCTCACCCGTTGGGAGCCCCCTCTGTaGCCCCTGGGAGTGTCCCCC +
Preference number: 2 (lower is better)
Translates to: LRAFLRVVLERSRSSLTRWEPPL*PLGVSP
Trigger: GGGGGACACTCCCAGGGGGCACAGAGGGGGCTCCCA...ACGGGTGAGGCTGCTTCTGCTTCTTTCCAACACGACTCGAAGGAAAGCCCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp GCGGCTACTGTTCTTGCGGCCGCGATTTCCGAGGCCACTTGCACGCCTCCAGCTACACACAGAACTGACTaGCACCTGCAGGCCGGGTCA +
Preference number: 2 (lower is better)
Translates to: AATVLAAAISEATCTPPATHRTD*HLQAGS
Trigger: TGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGT...AGCTGGAGGCGTGCAAGTGGCCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCACAGGTGGGCGTCTTTaGAGCCGTGCAGGGAGGAGC +
Preference number: 2 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSTGGRL*SRAGRS
Trigger: GCTCCTCCCTGCACGGCTGCAAAGACGCCCACCTGT...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp GTCCGCTCGCCGCGGGTGGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGAGGATTCTCCTTCTTCTCTaGGTACACCTGGCAGGGGAA +
Preference number: 2 (lower is better)
Translates to: VRSPRVGLAQGPFWRKWRILLLL*VHLAGE
Trigger: TTCCCCTGCCAGGTGTACGCAGAGAAGAAGGAGAAT...CCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGAGCGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319018.12
3UTR-3UTR CCA 90 bp TGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGTGGCTGGAGGGAGGATaGGAAGTGGGCTCCGAGGGC +
Preference number: 2 (lower is better)
Translates to: WVSRKGALGHTPSKRRFEWLEGG*EVGSEG
Trigger: GCCCTCGGAGCCCACTTCCCATCCTCCCTCCAGCCA...CTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp AGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCAGCGTGTGGAGACACGTaGGCCCTTCTCCACGTGCCC +
Preference number: 2 (lower is better)
Translates to: RWASLQPCREELSLSYQAACGDT*ALLHVP
Trigger: GGGCACGTGGAGAAGGGCCCACGTGTCTCCACACGC...TGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp CTCAGGGCTTTCCTTCGAGTCGTGTTGGAAAGAAGCAGAAGCAGCCTCACCCGTAGGCAGGTGCCCAGGTaGGAGCCCCCTCTGTGCCCC +
Preference number: 2 (lower is better)
Translates to: LRAFLRVVLERSRSSLTRRQVPR*EPPLCP
Trigger: GGGGCACAGAGGGGGCTCCCACCTGGGCACCTGCCT...ACGGGTGAGGCTGCTTCTGCTTCTTTCCAACACGACTCGAAGGAAAGCCCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp CTCAGGGCTTTCCTTCGAGTCGTGTTGGAAAGAAGCAGAAGCAGCCTCACCCGTGCCGCGGTCCCGGGGTaGTGCCCACTGGAGCTTCCT +
Preference number: 2 (lower is better)
Translates to: LRAFLRVVLERSRSSLTRAAVPG*CPLELP
Trigger: AGGAAGCTCCAGTGGGCACCACCCCGGGACCGCGGC...ACGGGTGAGGCTGCTTCTGCTTCTTTCCAACACGACTCGAAGGAAAGCCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp ACCTCAGGCAACTTGCTCCGTCTCTCTGGGCTCGGTCGCTGTCCCAGCTGGCTTCAGACCCACTGGCCTTaGATCCCCATGTCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: TSGNLLRLSGLGRCPSWLQTHWP*IPMSSA
Trigger: GGCTGAGGACATGGGGATCCAAGGCCAGTGGGTCTG...AAGCCAGCTGGGACAGCGACCGAGCCCAGAGAGACGGAGCAAGTTGCCTGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp CTATTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGCCGTGCAGGGATCAGGCAGCCGGGCTaGGCCCTGCAGACCCACTGG +
Preference number: 2 (lower is better)
Translates to: LFLWGSNKTGGRLCSRAGIRQPG*ALQTHW
Trigger: CCAGTGGGTCTGCAGGGCCCAGCCCGGCTGCCTGAT...CCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp TCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGGACACGGGGGCCGCCTaGTGGGTCTATTCCTGTGGG +
Preference number: 2 (lower is better)
Translates to: SGSPEREPSATHPPNADLDTGAA*WVYSCG
Trigger: CCCACAGGAATAGACCCACCAGGCGGCCCCCGTGTC...CAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp TCCTCGGCTGGTCTGAGGGGGCATTTGGCGGAAACTGACTTCTCCCCTGTCCTAGACACGGGGGCCGCCTaGTGGGTCTATTCCTGTGGG +
Preference number: 2 (lower is better)
Translates to: SSAGLRGHLAETDFSPVLDTGAA*WVYSCG
Trigger: CCCACAGGAATAGACCCACCAGGCGGCCCCCGTGTC...TAGGACAGGGGAGAAGTCAGTTTCCGCCAAATGCCCCCTCAGACCAGCCGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp TCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGTGGGCGCCTCGTGCGTaGCCTGCTGCGTGTAGTGCT +
Preference number: 2 (lower is better)
Translates to: SGSPEREPSATHPPNADLWAPRA*PAACSA
Trigger: AGCACTACACGCAGCAGGCCACGCACGAGGCGCCCA...CAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319018.12
3UTR CAA 90 bp GCAACTTGCTCCGTCTCTCTGGGCTCGGTCGCTGTCCCAGCTGGCTaGAGCGTTGAGCATGTCAGTTTCCTGGCACAGTCCTCGGCTGGT +
Preference number: 2 (lower is better)
Translates to: ATCSVSLGSVAVPAG*SVEHVSFLAQSSAG
Trigger: ACCAGCCGAGGACTGTGCCAGGAAACTGACATGCTCAACGCTCAAGCCAGCTGGGACAGCGACCGAGCCCAGAGAGACGGAGCAAGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CAA 90 bp TGGCCTGGGGCCAGTTCCCTCCTTCCCAGCCTTGCTTCCTGTGAGTaGGGTGTGGAGGTGAGTGTGCAACAGCTGGCACATAGCGCAGTG +
Preference number: 2 (lower is better)
Translates to: WPGASSLLPSLASCE*GVEVSVQQLAHSAV
Trigger: CACTGCGCTATGTGCCAGCTGTTGCACACTCACCTCCACACCCAACTCACAGGAAGCAAGGCTGGGAAGGAGGGAACTGGCCCCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR TCA 90 bp CTATTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGCCGTGCAGGGTGCCCGCTGGTTCTGTaGCCCATCCCAGGCACACGC +
Preference number: 2 (lower is better)
Translates to: LFLWGSNKTGGRLCSRAGCPLVL*PIPGTR
Trigger: GCGTGTGCCTGGGATGGGTCACAGAACCAGCGGGCA...CCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR TCA 90 bp CGGGGTGGTGCCCACTGGAGCTTCCTGTCTGCTCTCCACGCCCAGTGCCTGAGCGCATTTGGCGGAAACTaGCTTCTCCCCTGTCCTAAA +
Preference number: 2 (lower is better)
Translates to: RGGAHWSFLSALHAQCLSAFGGN*LLPCPK
Trigger: TTTAGGACAGGGGAGAAGTCAGTTTCCGCCAAATGC...GCTCAGGCACTGGGCGTGGAGAGCAGACAGGAAGCTCCAGTGGGCACCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR TCA 90 bp TGCCTGTCCCTCACCGGGGTCAGGATCCGGGCACTACGTGTAAGTGGCTTTCCCCAAGTCCCTGCTCTGTaGCCTCAGGCAACTTGCTCC +
Preference number: 2 (lower is better)
Translates to: CLSLTGVRIRALRVSGFPQVPAL*PQATCS
Trigger: GGAGCAAGTTGCCTGAGGTCACAGAGCAGGGACTTG...GGGAAAGCCACTTACACGTAGTGCCCGGATCCTGACCCCGGTGAGGGACAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR GCA 90 bp CTCAGGGCTTTCCTTCGAGTCGTGTTGGAAAGAAGCAGAAGCAGCCTCACCCGTCCCACAGCCCCACGGTaGTGGCCAGCCTCACAGGTG +
Preference number: 2 (lower is better)
Translates to: LRAFLRVVLERSRSSLTRPTAPR*WPASQV
Trigger: CACCTGTGAGGCTGGCCAGCACCGTGGGGCTGTGGG...ACGGGTGAGGCTGCTTCTGCTTCTTTCCAACACGACTCGAAGGAAAGCCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp TGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGGGCGGCTACTGTTCTTaGGGCCGCGATTTCCGAGGC +
Preference number: 2 (lower is better)
Translates to: WVSRKGALGHTPSKRRFEGGYCS*GRDFRG
Trigger: GCCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGCC...CTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp TGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGCAGATACGCGGCTCCTaGCTGCCTCATGGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: WVSRKGALGHTPSKRRFEQIRGS*LPHGLL
Trigger: GAGCAGGCCATGAGGCAGGCAGGAGCCGCGTATCTG...CTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp AGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCAGAGAGGCCCCACCTTTaGCAGGAGTTGGTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: RWASLQPCREELSLSYQAERPHL*QELVGG
Trigger: CCCACCCACCAACTCCTGCCAAAGGTGGGGCCTCTC...TGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp CTCAGGGCTTTCCTTCGAGTCGTGTTGGAAAGAAGCAGAAGCAGCCTCACCCGTCGAGGGCCTCACAGGTaGGCTCTCAGGAGAGGCCCC +
Preference number: 2 (lower is better)
Translates to: LRAFLRVVLERSRSSLTRRGPHR*ALRRGP
Trigger: GGGGCCTCTCCTGAGAGCCCACCTGTGAGGCCCTCG...ACGGGTGAGGCTGCTTCTGCTTCTTTCCAACACGACTCGAAGGAAAGCCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp AGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCACAAGAGGCTGGGAGCTaGCCCTCTCTAGCCCGGACT +
Preference number: 2 (lower is better)
Translates to: RWASLQPCREELSLSYQAQEAGS*PSLART
Trigger: AGTCCGGGCTAGAGAGGGCCAGCTCCCAGCCTCTTG...TGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp AGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCAAGCCCAGGCGGTGTCTaGGTCTCCAGAAAGGGAGCC +
Preference number: 2 (lower is better)
Translates to: RWASLQPCREELSLSYQASPGGV*VSRKGA
Trigger: GGCTCCCTTTCTGGAGACCCAGACACCGCCTGGGCT...TGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp TCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGGGCACAGTCCTCGGCTaGTCTGAGGGGGCATTTGGC +
Preference number: 2 (lower is better)
Translates to: SGSPEREPSATHPPNADLGTVLG*SEGAFG
Trigger: GCCAAATGCCCCCTCAGACCAGCCGAGGACTGTGCC...CAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCGTGTTGAATCTGTGCTaGGGCCACAGCAGCCCGAGC +
Preference number: 2 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSVLNLC*GHSSPS
Trigger: GCTCGGGCTGCTGTGGCCCCAGCACAGATTCAACAC...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR TCA 90 bp ACCTCAGGCAACTTGCTCCGTCTCTCTGGGCTCGGTCGCTGTCCCAGCTGGCTTAGCTGGCTTGAGCGTTaGGCATGTCAGTTTCCTGGC +
Preference number: 2 (lower is better)
Translates to: TSGNLLRLSGLGRCPSWLSWLER*ACQFPG
Trigger: GCCAGGAAACTGACATGCTCAACGCTCAAGCCAGCT...AAGCCAGCTGGGACAGCGACCGAGCCCAGAGAGACGGAGCAAGTTGCCTGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp AGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCAGCGTCTTTGCAGCCGTaGAGGGAGGAGCTCAGCCTA +
Preference number: 2 (lower is better)
Translates to: RWASLQPCREELSLSYQAASLQP*REELSL
Trigger: TAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGC...TGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp TCCTCGGCTGGTCTGAGGGGGCATTTGGCGGAAACTGACTTCTCCCCTGTCCTACCAGGCTCTTCCGATTaGCTCAGGTGCCCTCTCCTG +
Preference number: 2 (lower is better)
Translates to: SSAGLRGHLAETDFSPVLPGSSD*LRCPLL
Trigger: CAGGAGAGGGCACCTGAGCCAATCGGAAGAGCCTGG...TAGGACAGGGGAGAAGTCAGTTTCCGCCAAATGCCCCCTCAGACCAGCCGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp AGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCAAGCCCCCTTAGTCCCTaGGCGGCTACTGTTCTTGCG +
Preference number: 2 (lower is better)
Translates to: RWASLQPCREELSLSYQASPLSP*AATVLA
Trigger: CGCAAGAACAGTAGCCGCCCAGGGACTAAGGGGGCT...TGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp TCGCCGCGGGTGGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGAGGCTCCCATATTTGCCAAATGCCTaGAGGATGATGGTGGTGACG +
Preference number: 2 (lower is better)
Translates to: SPRVGLAQGPFWRKWRLPYLPNA*RMMVVT
Trigger: CGTCACCACCATCATCCTCCAGGCATTTGGCAAATA...TGGGAGCCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319018.12
3UTR-3UTR CCA 90 bp CCAGCTGGCTTGAGCGTTGAGCATGTCAGTTTCCTGGCACAGTCCTCGGCTGGTTCCTGCACGATGTCCTaGGGGCTCACTGTCTCCCTG +
Preference number: 2 (lower is better)
Translates to: PAGLSVEHVSFLAQSSAGSCTMS*GLTVSL
Trigger: CAGGGAGACAGTGAGCCCCCAGGACATCGTGCAGGA...ACCAGCCGAGGACTGTGCCAGGAAACTGACATGCTCAACGCTCAAGCCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319018.12
3UTR-3UTR TCA 90 bp TGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGCAAGTCCCTGCTCTGTaGCCTCAGGCAACTTGCTCC +
Preference number: 2 (lower is better)
Translates to: WVSRKGALGHTPSKRRFEQVPAL*PQATCS
Trigger: GGAGCAAGTTGCCTGAGGTCACAGAGCAGGGACTTG...CTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR TCA 90 bp CTATTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGCCGTGCAGGGGGCTCACTGTCTCCCTaGTGCCGCTGGAGATGCTCT +
Preference number: 2 (lower is better)
Translates to: LFLWGSNKTGGRLCSRAGGSLSP*CRWRCS
Trigger: AGAGCATCTCCAGCGGCATCAGGGAGACAGTGAGCC...CCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319018.12
3UTR-3UTR GCA 90 bp CTATTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGCCGTGCAGGGTGCTCCTCAGGCTCATaGCCTGCGGGAACAGAAGCC +
Preference number: 2 (lower is better)
Translates to: LFLWGSNKTGGRLCSRAGCSSGS*PAGTEA
Trigger: GGCTTCTGTTCCCGCAGGGCATGAGCCTGAGGAGCA...CCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp TCCTCGGCTGGTCTGAGGGGGCATTTGGCGGAAACTGACTTCTCCCCTGTCCTAGCACAAGGCCCGTTTTaGAGGAAGTGGAGGCTCCCA +
Preference number: 2 (lower is better)
Translates to: SSAGLRGHLAETDFSPVLAQGPF*RKWRLP
Trigger: TGGGAGCCTCCACTTCCTCCAAAACGGGCCTTGTGC...TAGGACAGGGGAGAAGTCAGTTTCCGCCAAATGCCCCCTCAGACCAGCCGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp ACCTCAGGCAACTTGCTCCGTCTCTCTGGGCTCGGTCGCTGTCCCAGCTGGCTTCTGGGGATTTTCAGCTaGACCATCTCCCAGAGAAGG +
Preference number: 2 (lower is better)
Translates to: TSGNLLRLSGLGRCPSWLLGIFS*TISQRR
Trigger: CCTTCTCTGGGAGATGGTCCAGCTGAAAATCCCCAG...AAGCCAGCTGGGACAGCGACCGAGCCCAGAGAGACGGAGCAAGTTGCCTGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp CCCTGCGGCCACCACCTAATTTATTGCCGTGCGTCCTGCTGCTGTGACTGCTTTCAGGTGACCACGTCCTaGGCTCAGTCTCTGAGGGTC +
Preference number: 2 (lower is better)
Translates to: PCGHHLIYCRASCCCDCFQVTTS*AQSLRV
Trigger: GACCCTCAGAGACTGAGCCCAGGACGTGGTCACCTG...AAAGCAGTCACAGCAGCAGGACGCACGGCAATAAATTAGGTGGTGGCCGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR TCA 90 bp TCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGCTGGCTTGAGCGTTaGGCATGTCAGTTTCCTGGC +
Preference number: 2 (lower is better)
Translates to: SGSPEREPSATHPPNADLSWLER*ACQFPG
Trigger: GCCAGGAAACTGACATGCTCAACGCTCAAGCCAGCT...CAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp TTGTGGATGCTGGGGATTTTCAGCTGGACCATCTCCCAGAGAAGGATACTGAGGCCAGCCTCCAGAAACTaGCCCTCGGCAGCAGGTCCC +
Preference number: 2 (lower is better)
Translates to: LWMLGIFSWTISQRRILRPASRN*PSAAGP
Trigger: GGGACCTGCTGCCGAGGGGCAGTTTCTGGAGGCTGG...CCTCAGTATCCTTCTCTGGGAGATGGTCCAGCTGAAAATCCCCAGCATCCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCCTTGGCCTCCCCAAGTaGTGGAATTACAGGTGTGAG +
Preference number: 2 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSLGLPK*WNYRCE
Trigger: CTCACACCTGTAATTCCAGCACTTGGGGAGGCCAAG...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp CTCAGGGCTTTCCTTCGAGTCGTGTTGGAAAGAAGCAGAAGCAGCCTCACCCGTCTCACAGGTGCCCGCTaGTTCTGTGACCCATCCCAG +
Preference number: 2 (lower is better)
Translates to: LRAFLRVVLERSRSSLTRLTGAR*FCDPSQ
Trigger: CTGGGATGGGTCACAGAACCAGCGGGCACCTGTGAG...ACGGGTGAGGCTGCTTCTGCTTCTTTCCAACACGACTCGAAGGAAAGCCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp AAGCAAGAGGCTGGGAGCTGGCCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCGTGGGTCTATTCCTGTaGGGATCCAATAAGACAGGT +
Preference number: 2 (lower is better)
Translates to: KQEAGSWPSLARTPLVCAVGLFL*GSNKTG
Trigger: ACCTGTCTTATTGGATCCCCACAGGAATAGACCCAC...GGCACAGACCAGTGGAGTCCGGGCTAGAGAGGGCCAGCTCCCAGCCTCTTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp TGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGAGCATGTCAGTTTCCTaGCACAGTCCTCGGCTGGTC +
Preference number: 2 (lower is better)
Translates to: WVSRKGALGHTPSKRRFESMSVS*HSPRLV
Trigger: GACCAGCCGAGGACTGTGCCAGGAAACTGACATGCT...CTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR GCA 90 bp CTCAGGGCTTTCCTTCGAGTCGTGTTGGAAAGAAGCAGAAGCAGCCTCACCCGTATTTCCGAGGCCACTTaGACGCCTCCAGCTTCCTGC +
Preference number: 2 (lower is better)
Translates to: LRAFLRVVLERSRSSLTRISEAT*TPPASC
Trigger: GCAGGAAGCTGGAGGCGTGCAAGTGGCCTCGGAAAT...ACGGGTGAGGCTGCTTCTGCTTCTTTCCAACACGACTCGAAGGAAAGCCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp TTGTGGATGCTGGGGATTTTCAGCTGGACCATCTCCCAGAGAAGGATACTGAGGGGCACAGTCCTCGGCTaGTCTGAGGGGGCATTTGGC +
Preference number: 2 (lower is better)
Translates to: LWMLGIFSWTISQRRILRGTVLG*SEGAFG
Trigger: GCCAAATGCCCCCTCAGACCAGCCGAGGACTGTGCC...CCTCAGTATCCTTCTCTGGGAGATGGTCCAGCTGAAAATCCCCAGCATCCACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CCA 90 bp TCCTCGGCTGGTCTGAGGGGGCATTTGGCGGAAACTGACTTCTCCCCTGTCCTATTGAAGTCCCCGTCGTaGTATTTGCCAAATGCCTGG +
Preference number: 2 (lower is better)
Translates to: SSAGLRGHLAETDFSPVLLKSPS*YLPNAW
Trigger: CCAGGCATTTGGCAAATACCACGACGGGGACTTCAA...TAGGACAGGGGAGAAGTCAGTTTCCGCCAAATGCCCCCTCAGACCAGCCGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319018.12
3UTR-3UTR CCA 90 bp CCAGCTGGCTTGAGCGTTGAGCATGTCAGTTTCCTGGCACAGTCCTCGGCTGGTGTGGGTCTATTCCTGTaGGGATCCAATAAGACAGGT +
Preference number: 2 (lower is better)
Translates to: PAGLSVEHVSFLAQSSAGVGLFL*GSNKTG
Trigger: ACCTGTCTTATTGGATCCCCACAGGAATAGACCCAC...ACCAGCCGAGGACTGTGCCAGGAAACTGACATGCTCAACGCTCAAGCCAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR TCA 72 bp GTGTGGACCCCGCCGGCCTGCGGCGCCCGGAGCTGCTaGCTGTGTCAGAGCCCGGCTGCCCAGCGCCCCGGC +
Preference number: 3 (lower is better)
Translates to: VWTPPACGARSC*LCQSPAAQRPG
Trigger: GCCGGGGCGCTGGGCAGCCGGGCTCTGACACAGTCAGCAGCTCCGGGCGCCGCAGGCCGGCGGGGTCCACAC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 72 bp TCCCGCCGGAGCCGCCGCTGGGGTGGGTGCCGGGCCTaGGCGCCTCGTGCGTGGCCTGCTGCGTGTAGTGCT +
Preference number: 3 (lower is better)
Translates to: SRRSRRWGGCRA*APRAWPAACSA
Trigger: AGCACTACACGCAGCAGGCCACGCACGAGGCGCCCAGGCCCGGCACCCACCCCAGCGGCGGCTCCGGCGGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319018.12
3UTR GCA 72 bp CAGGTGCCCTCTCCTGCGGTGGCGGGCCCACCTGGGTaGCTGCCAGGGCCATCAGGTGCCCTGACCCCCTGG +
Preference number: 3 (lower is better)
Translates to: QVPSPAVAGPPG*LPGPSGALTPW
Trigger: CCAGGGGGTCAGGGCACCTGATGGCCCTGGCAGGCACCCAGGTGGGCCCGCCACCGCAGGAGAGGGCACCTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR GCA 72 bp CCCAGGGGGTCCCCAGGCTCTTCCGATTGGCTCAGGTaGCCTCTCCTGCGGTGGCGGGCCCACCTGGGTGCC +
Preference number: 3 (lower is better)
Translates to: PRGSPGSSDWLR*PLLRWRAHLGA
Trigger: GGCACCCAGGTGGGCCCGCCACCGCAGGAGAGGGCACCTGAGCCAATCGGAAGAGCCTGGGGACCCCCTGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR GCA 72 bp GCTTGGCGGGTGCGCTGGGCCCAGATACGCGGCTCCTaGCTGCCTCATGGCCTGCTCCTCTGTCGGGGCCTG +
Preference number: 3 (lower is better)
Translates to: AWRVRWAQIRGS*LPHGLLLCRGL
Trigger: CAGGCCCCGACAGAGGAGCAGGCCATGAGGCAGGCAGGAGCCGCGTATCTGGGCCCAGCGCACCCGCCAAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR GCA 72 bp GGCCCGTGTCTGGCCGCCGCCGCCCTGCCCCGTCCCTaGGGCCACCACCTAATTTATTGCCGTGCGTCCTGC +
Preference number: 3 (lower is better)
Translates to: GPCLAAAALPRP*GHHLIYCRASC
Trigger: GCAGGACGCACGGCAATAAATTAGGTGGTGGCCGCAGGGACGGGGCAGGGCGGCGGCGGCCAGACACGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR CCA 72 bp GGCTCTTCCGATTGGCTCAGGTGCCCTCTCCTGCGGTaGCGGGCCCACCTGGGTGCCTGCCAGGGCCATCAG +
Preference number: 3 (lower is better)
Translates to: GSSDWLRCPLLR*RAHLGACQGHQ
Trigger: CTGATGGCCCTGGCAGGCACCCAGGTGGGCCCGCCACCGCAGGAGAGGGCACCTGAGCCAATCGGAAGAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 72 bp GCCAGGGCTCCCCTGTGGCTGGCGTGTGGAGACACGTaGGCCCTTCTCCACGTGCCCACGAGGGCCGTAGCA +
Preference number: 3 (lower is better)
Translates to: ARAPLWLACGDT*ALLHVPTRAVA
Trigger: TGCTACGGCCCTCGTGGGCACGTGGAGAAGGGCCCACGTGTCTCCACACGCCAGCCACAGGGGAGCCCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 72 bp ACCTCAGCCTCTGCCGCCCGGAGCCCAGGCGGTGTCTaGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCC +
Preference number: 3 (lower is better)
Translates to: TSASAARSPGGV*VSRKGALGHTP
Trigger: GGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGACACCGCCTGGGCTCCGGGCGGCAGAGGCTGAGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 72 bp CAGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTaGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTC +
Preference number: 3 (lower is better)
Translates to: QAAGPRRTGRSG*PVLSRLGVLGV
Trigger: GACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR CAA 90 bp TCAGTCTCTGAGGGTCAGGCCGCAGTCCTGAGTGTCCCCATCTGCCCCACCCGGGCCGACGGGTGTGAGTaGGGGGCACAGAGCCCCAGC +
Preference number: 3 (lower is better)
Translates to: SVSEGQAAVLSVPICPTRADGCE*GAQSPS
Trigger: GCTGGGGCTCTGTGCCCCCAACTCACACCCGTCGGC...CCGGGTGGGGCAGATGGGGACACTCAGGACTGCGGCCTGACCCTCAGAGACTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR CAA 90 bp GGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCACAGCAGCCCGAGCTaGTCACTAGCAATGGCAGGG +
Preference number: 3 (lower is better)
Translates to: GPRRTGRSGWPVLSRLGVHSSPS*SLAMAG
Trigger: CCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTG...AACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR CCA 72 bp AGCCCCACGGTGCTGGCCAGCCTCACAGGTGCCCGCTaGTTCTGTGACCCATCCCAGGCACACGCTCCCCTG +
Preference number: 3 (lower is better)
Translates to: SPTVLASLTGAR*FCDPSQAHAPL
Trigger: CAGGGGAGCGTGTGCCTGGGATGGGTCACAGAACCAGCGGGCACCTGTGAGGCTGGCCAGCACCGTGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 72 bp GCCTTCGTGGCCTTGTCCGCTCGCCGCGGGTGGGGCTaGCACAAGGCCCGTTTTGGAGGAAGTGGAGGCTCC +
Preference number: 3 (lower is better)
Translates to: AFVALSARRGWG*HKARFGGSGGS
Trigger: GGAGCCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGAGCGGACAAGGCCACGAAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 72 bp GGCCCTGCCTTCGTGGCCTTGTCCGCTCGCCGCGGGTaGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGA +
Preference number: 3 (lower is better)
Translates to: GPAFVALSARRG*GWHKARFGGSG
Trigger: TCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGAGCGGACAAGGCCACGAAGGCAGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CAA 90 bp GTCCGCTCGCCGCGGGTGGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGAGGGGCACAAGGCCCGTTTaGGAGGAAGTGGAGGCTCCC +
Preference number: 3 (lower is better)
Translates to: VRSPRVGLAQGPFWRKWRGTRPV*EEVEAP
Trigger: GGGAGCCTCCACTTCCTCCAAAACGGGCCTTGTGCC...CCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGAGCGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CAA 90 bp ACCTCAGGCAACTTGCTCCGTCTCTCTGGGCTCGGTCGCTGTCCCAGCTGGCTTCCTGCCTTCGTGGCCTaGTCCGCTCGCCGCGGGTGG +
Preference number: 3 (lower is better)
Translates to: TSGNLLRLSGLGRCPSWLPAFVA*SARRGW
Trigger: CCACCCGCGGCGAGCGGACAAGGCCACGAAGGCAGG...AAGCCAGCTGGGACAGCGACCGAGCCCAGAGAGACGGAGCAAGTTGCCTGAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CAA 90 bp GCTCCTGCCTGCCTCATGGCCTGCTCCTCTGTCGGGGCCTGTCACCGGGAAACCGGGCGGCTACTGTTCTaGCGGCCGCGATTTCCGAGG +
Preference number: 3 (lower is better)
Translates to: APACLMACSSVGACHRETGRLLF*RPRFPR
Trigger: CCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGCCC...GGTTTCCCGGTGACAGGCCCCGACAGAGGAGCAGGCCATGAGGCAGGCAGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CAA 90 bp GGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTTTGGCCTGCAGTGCTTaGCTGGAGAAGGGACTCCCT +
Preference number: 3 (lower is better)
Translates to: GPRRTGRSGWPVLSRLGVLACSA*LEKGLP
Trigger: AGGGAGTCCCTTCTCCAGCAAAGCACTGCAGGCCAA...AACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR TCA 72 bp TCTAGCCCGGACTCCACTGGTCTGTGCCCGCCCTGCTaGGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTG +
Preference number: 3 (lower is better)
Translates to: SSPDSTGLCPPC*VPRRPQVPLFL
Trigger: CAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAGACCAGTGGAGTCCGGGCTAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR GCA 72 bp GGGAGTCTGACCCACTCACAGCTCCCATGGGGTCCGTaGAGCCAAGGCCCCGCAGCCACACTCACTCTCCGC +
Preference number: 3 (lower is better)
Translates to: GSLTHSQLPWGP*SQGPAATLTLR
Trigger: GCGGAGAGTGAGTGTGGCTGCGGGGCCTTGGCTGCACGGACCCCATGGGAGCTGTGAGTGGGTCAGACTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR GCA 72 bp TCTGAGGGTCAGGCCGCAGTCCTGAGTGTCCCCATCTaGCCCACCCGGAGCCCCCTGTCCATGCAGCCTCTC +
Preference number: 3 (lower is better)
Translates to: SEGQAAVLSVPI*PTRSPLSMQPL
Trigger: GAGAGGCTGCATGGACAGGGGGCTCCGGGTGGGGCAGATGGGGACACTCAGGACTGCGGCCTGACCCTCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR GCA 72 bp ACAGGTGGGAGTTGGGAGCAAAGCGGAGGCCCGGGCTaGCCGCCGTCCCCCTTCATCTCCCCACGGACTGTA +
Preference number: 3 (lower is better)
Translates to: TGGSWEQSGGPG*PPSPFISPRTV
Trigger: TACAGTCCGTGGGGAGATGAAGGGGGACGGCGGGCAGCCCGGGCCTCCGCTTTGCTCCCAACTCCCACCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR CCA 72 bp AGAGCAAAGCGCCCCTGCACAGTGGCCGGAAGCCCGTaGACTCCTCCGAAAAGCCACGGGCCTGCCCGCATG +
Preference number: 3 (lower is better)
Translates to: RAKRPCTVAGSP*TPPKSHGPARM
Trigger: CATGCGGGCAGGCCCGTGGCTTTTCGGAGGAGTCCACGGGCTTCCGGCCACTGTGCAGGGGCGCTTTGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR CCA 72 bp CTTGGCCTGCAGTGCTTTGCTGGAGAAGGGACTCCCTaGTCCCCAGGGTGGACGGAGCCGCTGTCACCGCCC +
Preference number: 3 (lower is better)
Translates to: LGLQCFAGEGTP*SPGWTEPLSPP
Trigger: GGGCGGTGACAGCGGCTCCGTCCACCCTGGGGACCAGGGAGTCCCTTCTCCAGCAAAGCACTGCAGGCCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR CCA 72 bp GACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTaGGGTTCTTGGTGTCCACGTCTTGTGGGCCGTGGG +
Preference number: 3 (lower is better)
Translates to: DRPQRVAGSVPS*GSWCPRLVGRG
Trigger: CCCACGGCCCACAAGACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR TCA 72 bp CCAGACAGGTGGGACCCCTTTCCCGCATGCAGACTCTaGGCAGCAGCCTCCTGTGACCCCCACCGCGTCCTG +
Preference number: 3 (lower is better)
Translates to: PDRWDPFPACRL*AAASCDPHRVL
Trigger: CAGGACGCGGTGGGGGTCACAGGAGGCTGCTGCTCAGAGTCTGCATGCGGGAAAGGGGTCCCACCTGTCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR TCA 72 bp CCTCGGCAGCAGGTCCCTGGGGACCTGCTGACAGAGTaGGACACGGGGGCCGCCTGGTGGGTCTATTCCTGT +
Preference number: 3 (lower is better)
Translates to: PRQQVPGDLLTE*DTGAAWWVYSC
Trigger: ACAGGAATAGACCCACCAGGCGGCCCCCGTGTCTCACTCTGTCAGCAGGTCCCCAGGGACCTGCTGCCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR GCA 72 bp GCTACTGTTCTTGCGGCCGCGATTTCCGAGGCCACTTaGACGCCTCCAGCTTCCTGCGGGCAGGGCACGCGT +
Preference number: 3 (lower is better)
Translates to: ATVLAAAISEAT*TPPASCGQGTR
Trigger: ACGCGTGCCCTGCCCGCAGGAAGCTGGAGGCGTGCAAGTGGCCTCGGAAATCGCGGCCGCAAGAACAGTAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR GCA 72 bp ATACTGAGGCCAGGAGAGGCTAGAGAGCTTGGCGGGTaGGCTGGGCCCAGATACGCGGCTCCTGCCTGCCTC +
Preference number: 3 (lower is better)
Translates to: ILRPGEARELGG*AGPRYAAPACL
Trigger: GAGGCAGGCAGGAGCCGCGTATCTGGGCCCAGCGCACCCGCCAAGCTCTCTAGCCTCTCCTGGCCTCAGTAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 72 bp GGGAGGATGGGAAGTGGGCTCCGAGGGCCTCACAGGTaGGCTCTCAGGAGAGGCCCCACCTTTGGCAGGAGT +
Preference number: 3 (lower is better)
Translates to: GRMGSGLRGPHR*ALRRGPTFGRS
Trigger: ACTCCTGCCAAAGGTGGGGCCTCTCCTGAGAGCCCACCTGTGAGGCCCTCGGAGCCCACTTCCCATCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 72 bp GTGACCGTGAGGCTGGGACAGCCACGGGGGAGGTGCTaGTCAGGTGACCACGTCCTGGGCTCAGTCTCTGAG +
Preference number: 3 (lower is better)
Translates to: VTVRLGQPRGRC*SGDHVLGSVSE
Trigger: CTCAGAGACTGAGCCCAGGACGTGGTCACCTGACCAGCACCTCCCCCGTGGCTGTCCCAGCCTCACGGTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR CAA 90 bp AAGCAAGAGGCTGGGAGCTGGCCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCGGAGAGGCCCCACCTTaGGCAGGAGTTGGTGGGTGG +
Preference number: 3 (lower is better)
Translates to: KQEAGSWPSLARTPLVCAGEAPP*AGVGGW
Trigger: CCACCCACCAACTCCTGCCAAAGGTGGGGCCTCTCC...GGCACAGACCAGTGGAGTCCGGGCTAGAGAGGGCCAGCTCCCAGCCTCTTGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CAA 90 bp CCCTGCGGCCACCACCTAATTTATTGCCGTGCGTCCTGCTGCTGTGACTGCTTTCCCCCTCGAGGCAGGTaGAGCCCCGGCCTGGACCGC +
Preference number: 3 (lower is better)
Translates to: PCGHHLIYCRASCCCDCFPPRGR*SPGLDR
Trigger: GCGGTCCAGGCCGGGGCTCAACCTGCCTCGAGGGGG...AAAGCAGTCACAGCAGCAGGACGCACGGCAATAAATTAGGTGGTGGCCGCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR GCA 72 bp AACCTGTGCTGCGGGCCCCAGACACACAGAACTGACTaGCACCTGCAGGCCGGGTCACCGTACTGTCCCCTG +
Preference number: 3 (lower is better)
Translates to: NLCCGPQTHRTD*HLQAGSPYCPL
Trigger: CAGGGGACAGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGTCTGGGGCCCGCAGCACAGGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 72 bp CCAGCCGTGTGTCCTCCCAGAAGCCCCCTTAGTCCCTaGGCGGCTACTGTTCTTGCGGCCGCGATTTCCGAG +
Preference number: 3 (lower is better)
Translates to: PAVCPPRSPLSP*AATVLAAAISE
Trigger: CTCGGAAATCGCGGCCGCAAGAACAGTAGCCGCCCAGGGACTAAGGGGGCTTCTGGGAGGACACACGGCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 72 bp CTTATCAGGCAGCCGGGCTGGGCCCTGCAGACCCACTaGCCTTGGATCCCCATGTCCTCAGCCCAGGAAGCA +
Preference number: 3 (lower is better)
Translates to: LIRQPGWALQTH*PWIPMSSAQEA
Trigger: TGCTTCCTGGGCTGAGGACATGGGGATCCAAGGCCAGTGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 72 bp GGGAGGAGCTCAGCCTATCTTATCAGGCAGCCGGGCTaGGCCCTGCAGACCCACTGGCCTTGGATCCCCATG +
Preference number: 3 (lower is better)
Translates to: GRSSAYLIRQPG*ALQTHWPWIPM
Trigger: CATGGGGATCCAAGGCCAGTGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAGATAGGCTGAGCTCCTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 72 bp CAGGGAGGAGAGAGGGCCTCTGTGGAGCCGGCTGCCTaGTGTCCAAGTCCCTGCTCTGTGACCTCAGGCAAC +
Preference number: 3 (lower is better)
Translates to: QGGERASVEPAA*CPSPCSVTSGN
Trigger: GTTGCCTGAGGTCACAGAGCAGGGACTTGGACACCAGGCAGCCGGCTCCACAGAGGCCCTCTCTCCTCCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 72 bp CTGTCTGGGAGCAGAGAGCAAAGCGCCCCTGCACAGTaGCCGGAAGCCCGTGGACTCCTCCGAAAAGCCACG +
Preference number: 3 (lower is better)
Translates to: LSGSREQSAPAQ*PEARGLLRKAT
Trigger: CGTGGCTTTTCGGAGGAGTCCACGGGCTTCCGGCCACTGTGCAGGGGCGCTTTGCTCTCTGCTCCCAGACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR CAA 90 bp ACCTCAGGCAACTTGCTCCGTCTCTCTGGGCTCGGTCGCTGTCCCAGCTGGCTTGGGCGGCTACTGTTCTaGCGGCCGCGATTTCCGAGG +
Preference number: 3 (lower is better)
Translates to: TSGNLLRLSGLGRCPSWLGRLLF*RPRFPR
Trigger: CCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGCCC...AAGCCAGCTGGGACAGCGACCGAGCCCAGAGAGACGGAGCAAGTTGCCTGAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CAA 90 bp TCAGTCTCTGAGGGTCAGGCCGCAGTCCTGAGTGTCCCCATCTGCCCCACCCGGAGCAATCCACTCGCCTaGGCCTCCCCAAGTGCTGGA +
Preference number: 3 (lower is better)
Translates to: SVSEGQAAVLSVPICPTRSNPLA*ASPSAG
Trigger: TCCAGCACTTGGGGAGGCCAAGGCGAGTGGATTGCT...CCGGGTGGGGCAGATGGGGACACTCAGGACTGCGGCCTGACCCTCAGAGACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR TCA 72 bp GCTGCCCAGCCTGGGATCCGTCCGCTGTCTGTCTCCTaGACCAGGGAGTCTGACCCACTCACAGCTCCCATG +
Preference number: 3 (lower is better)
Translates to: AAQPGIRPLSVS*TRESDPLTAPM
Trigger: CATGGGAGCTGTGAGTGGGTCAGACTCCCTGGTTCAGGAGACAGACAGCGGACGGATCCCAGGCTGGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR GCA 72 bp ACAGGGTCTGTCTGGGAGCAGAGAGCAAAGCGCCCCTaGACAGTGGCCGGAAGCCCGTGGACTCCTCCGAAA +
Preference number: 3 (lower is better)
Translates to: TGSVWEQRAKRP*TVAGSPWTPPK
Trigger: TTTCGGAGGAGTCCACGGGCTTCCGGCCACTGTGCAGGGGCGCTTTGCTCTCTGCTCCCAGACAGACCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR CCA 72 bp CAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTaGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCT +
Preference number: 3 (lower is better)
Translates to: QRVAGSVPSWGS*CPRLVGRGLLP
Trigger: AGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR CAA 90 bp TCAGTCTCTGAGGGTCAGGCCGCAGTCCTGAGTGTCCCCATCTGCCCCACCCGGGCAGATTTGAGCAACTaGACCCCTATCGGGGTGGCC +
Preference number: 3 (lower is better)
Translates to: SVSEGQAAVLSVPICPTRADLSN*TPIGVA
Trigger: GGCCACCCCGATAGGGGTCAAGTTGCTCAAATCTGC...CCGGGTGGGGCAGATGGGGACACTCAGGACTGCGGCCTGACCCTCAGAGACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR CAA 90 bp GCGGTGTCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGGCCAGCAGCAGCCCTaGCCAGAACGACAGGAAGAT +
Preference number: 3 (lower is better)
Translates to: AVSGSPEREPSATHPPNAGQQQP*PERQED
Trigger: ATCTTCCTGTCGTTCTGGCAAGGGCTGCTGCTGGCC...TGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGACACCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319018.12
3UTR-3UTR CAA 90 bp AGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCAGGAGAGGCCCCACCTTaGGCAGGAGTTGGTGGGTGG +
Preference number: 3 (lower is better)
Translates to: RWASLQPCREELSLSYQAGEAPP*AGVGGW
Trigger: CCACCCACCAACTCCTGCCAAAGGTGGGGCCTCTCC...TGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CAA 90 bp AGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCGGGCTGGGCCCTGCAGACCCAGCAGATTTGAGCAACTaGACCCCTATCGGGGTGGCC +
Preference number: 3 (lower is better)
Translates to: REELSLSYQAAGLGPADPADLSN*TPIGVA
Trigger: GGCCACCCCGATAGGGGTCAAGTTGCTCAAATCTGC...TGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAGATAGGCTGAGCTCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CAA 90 bp GCGGTGTCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCATTGATGGTGAGGAACTaGAGGACGGGCTGGAAGGGC +
Preference number: 3 (lower is better)
Translates to: AVSGSPEREPSATHPPNALMVRN*RTGWKG
Trigger: GCCCTTCCAGCCCGTCCTCAAGTTCCTCACCATCAA...TGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGACACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319018.12
3UTR TCA 72 bp TCTGGGCTCGGTCGCTGTCCCAGCTGGCTTGAGCGTTaGGCATGTCAGTTTCCTGGCACAGTCCTCGGCTGG +
Preference number: 3 (lower is better)
Translates to: SGLGRCPSWLER*ACQFPGTVLGW
Trigger: CCAGCCGAGGACTGTGCCAGGAAACTGACATGCTCAACGCTCAAGCCAGCTGGGACAGCGACCGAGCCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 72 bp AGCCTGCAGGAAGCTGTGAGCAAGACAGGGTCTGTCTaGGAGCAGAGAGCAAAGCGCCCCTGCACAGTGGCC +
Preference number: 3 (lower is better)
Translates to: SLQEAVSKTGSV*EQRAKRPCTVA
Trigger: GGCCACTGTGCAGGGGCGCTTTGCTCTCTGCTCCCAGACAGACCCTGTCTTGCTCACAGCTTCCTGCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR CCA 72 bp TCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTaGCCTGCAGTGCTTTGCTGGAGAAGGGACTCCCTG +
Preference number: 3 (lower is better)
Translates to: STSCGPWASTCP*PAVLCWRRDSL
Trigger: CAGGGAGTCCCTTCTCCAGCAAAGCACTGCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR CCA 72 bp CTGTCCCGTCTTGGGGTTCTTGGTGTCCACGTCTTGTaGGCCGTGGGCTTCTACCTGCCCTTGGCCTGCAGT +
Preference number: 3 (lower is better)
Translates to: LSRLGVLGVHVL*AVGFYLPLACS
Trigger: ACTGCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCCAAGACGGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR CAA 90 bp TCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGGGCACAAGGCCCGTTTaGGAGGAAGTGGAGGCTCCC +
Preference number: 3 (lower is better)
Translates to: SGSPEREPSATHPPNADLGTRPV*EEVEAP
Trigger: GGGAGCCTCCACTTCCTCCAAAACGGGCCTTGTGCC...CAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CAA 90 bp ACCTCAGGCAACTTGCTCCGTCTCTCTGGGCTCGGTCGCTGTCCCAGCTGGCTTGCTGTCCCAGCTGGCTaGAGCGTTGAGCATGTCAGT +
Preference number: 3 (lower is better)
Translates to: TSGNLLRLSGLGRCPSWLAVPAG*SVEHVS
Trigger: ACTGACATGCTCAACGCTCAAGCCAGCTGGGACAGC...AAGCCAGCTGGGACAGCGACCGAGCCCAGAGAGACGGAGCAAGTTGCCTGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CAA 90 bp AGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCGGGCTGGGCCCTGCAGACCCATCCCCGTCGTGGTATTaGCCAAATGCCTGGAGGATG +
Preference number: 3 (lower is better)
Translates to: REELSLSYQAAGLGPADPSPSWY*PNAWRM
Trigger: CATCCTCCAGGCATTTGGCAAATACCACGACGGGGA...TGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAGATAGGCTGAGCTCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319018.12
3UTR GCA 72 bp GCCCTGCCCCGTCCCTGCGGCCACCACCTAATTTATTaGCGTGCGTCCTGCTGCTGTGACTGCTTTTGTACC +
Preference number: 3 (lower is better)
Translates to: ALPRPCGHHLIY*RASCCCDCFCT
Trigger: GGTACAAAAGCAGTCACAGCAGCAGGACGCACGGCAATAAATTAGGTGGTGGCCGCAGGGACGGGGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR GCA 72 bp TTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTaGCCTTGGCCTGCAGTGCTTTGCTGGAGAAGGGAC +
Preference number: 3 (lower is better)
Translates to: LVSTSCGPWAST*PWPAVLCWRRD
Trigger: GTCCCTTCTCCAGCAAAGCACTGCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR CCA 72 bp GTGAGACACGGGGGCCGCCTGGTGGGTCTATTCCTGTaGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGC +
Preference number: 3 (lower is better)
Translates to: VRHGGRLVGLFL*GSNKTGGRLCS
Trigger: GCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAGACCCACCAGGCGGCCCCCGTGTCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 72 bp GCAGAGAGCAGCACGGCTGTCAGTGTTCCCCTTCCCTaGGAGACATCTCGCCCAGCTTTGCTGGACTCTCAG +
Preference number: 3 (lower is better)
Translates to: AESSTAVSVPLP*ETSRPALLDSQ
Trigger: CTGAGAGTCCAGCAAAGCTGGGCGAGATGTCTCCCAGGGAAGGGGAACACTGACAGCCGTGCTGCTCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR TCA 72 bp GGATTTTCAGCTGGACCATCTCCCAGAGAAGGATACTaGGGCCAGGAGAGGCTAGAGAGCTTGGCGGGTGCG +
Preference number: 3 (lower is better)
Translates to: GFSAGPSPREGY*GQERLESLAGA
Trigger: CGCACCCGCCAAGCTCTCTAGCCTCTCCTGGCCTCAGTATCCTTCTCTGGGAGATGGTCCAGCTGAAAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CCA 72 bp AGGGCCCCCAGGGCTTCCACCGTTTCTTGTGGATGCTaGGGATTTTCAGCTGGACCATCTCCCAGAGAAGGA +
Preference number: 3 (lower is better)
Translates to: RAPRASTVSCGC*GFSAGPSPREG
Trigger: TCCTTCTCTGGGAGATGGTCCAGCTGAAAATCCCCAGCATCCACAAGAAACGGTGGAAGCCCTGGGGGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CAA 90 bp CCAGCTGGCTTGAGCGTTGAGCATGTCAGTTTCCTGGCACAGTCCTCGGCTGGTGGCTTCCACCGTTTCTaGTGGATGCTGGGGATTTTC +
Preference number: 3 (lower is better)
Translates to: PAGLSVEHVSFLAQSSAGGFHRF*WMLGIF
Trigger: GAAAATCCCCAGCATCCACAAGAAACGGTGGAAGCC...ACCAGCCGAGGACTGTGCCAGGAAACTGACATGCTCAACGCTCAAGCCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CAA 90 bp AGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCACCTCCAAACGCAGATTaGAGCAACTTGACCCCTATC +
Preference number: 3 (lower is better)
Translates to: RWASLQPCREELSLSYQAPPNAD*SNLTPI
Trigger: GATAGGGGTCAAGTTGCTCAAATCTGCGTTTGGAGG...TGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR GCA 72 bp TTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTaGAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATC +
Preference number: 3 (lower is better)
Translates to: FLWGSNKTGGRL*SRAGRSSAYLI
Trigger: GATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR-3UTR CAA 90 bp TTGTGGATGCTGGGGATTTTCAGCTGGACCATCTCCCAGAGAAGGATACTGAGGGCTGTCCCAGCTGGCTaGAGCGTTGAGCATGTCAGT +
Preference number: 3 (lower is better)
Translates to: LWMLGIFSWTISQRRILRAVPAG*SVEHVS
Trigger: ACTGACATGCTCAACGCTCAAGCCAGCTGGGACAGC...CCTCAGTATCCTTCTCTGGGAGATGGTCCAGCTGAAAATCCCCAGCATCCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR GCA 72 bp GGACTCTTTGTCACGTGGGTTTGTTTTCTGTCTCCGTaGCTCCGGCTTCCCAAAGAGATCCAGGTCTTTGCG +
Preference number: 3 (lower is better)
Translates to: GLFVTWVCFLSP*LRLPKEIQVFA
Trigger: CGCAAAGACCTGGATCTCTTTGGGAAGCCGGAGGCACGGAGACAGAAAACAAACCCACGTGACAAAGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR-3UTR CAA 90 bp CTCAGGGCTTTCCTTCGAGTCGTGTTGGAAAGAAGCAGAAGCAGCCTCACCCGTAGGAAGATGACGGCTTaGATGGTGAGGAACTTGAGG +
Preference number: 3 (lower is better)
Translates to: LRAFLRVVLERSRSSLTRRKMTA*MVRNLR
Trigger: CCTCAAGTTCCTCACCATCAAAGCCGTCATCTTCCT...ACGGGTGAGGCTGCTTCTGCTTCTTTCCAACACGACTCGAAGGAAAGCCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319018.12
3UTR GCA 72 bp CCCTGCGGCCACCACCTAATTTATTGCCGTGCGTCCTaGTGCTGTGACTGCTTTTGTACCTTTGCAATAAAG +
Preference number: 3 (lower is better)
Translates to: PCGHHLIYCRAS*CCDCFCTFAIK
Trigger: CTTTATTGCAAAGGTACAAAAGCAGTCACAGCAGCAGGACGCACGGCAATAAATTAGGTGGTGGCCGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR GCA 72 bp TGCAATAAAGAATTTTCTGGTTTCAGACCCTTTCGTTaGGTAGCTGGTGCTTTCAGCTGGGGCTTTCTTGGG +
Preference number: 3 (lower is better)
Translates to: CNKEFSGFRPFR*VAGAFSWGFLG
Trigger: CCCAAGAAAGCCCCAGCTGAAAGCACCAGCTACGCAACGAAAGGGTCTGAAACCAGAAAATTCTTTATTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR GCA 72 bp TGCGGCCACCACCTAATTTATTGCCGTGCGTCCTGCTaGTGTGACTGCTTTTGTACCTTTGCAATAAAGAAT +
Preference number: 3 (lower is better)
Translates to: CGHHLIYCRASC*CDCFCTFAIKN
Trigger: ATTCTTTATTGCAAAGGTACAAAAGCAGTCACAGCAGCAGGACGCACGGCAATAAATTAGGTGGTGGCCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp CGCCGGCCTGCGGCGCCCGGAGCTGCTGACTGTGTCAGAGCCCGGCTGCCCAGCGCTCTGGGCCCAGCCTaGTCCTCCTGGGGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: RRPAAPGAADCVRARLPSALGPA*SSWGSR
Trigger: TCGGCTCCCCCAGGAGGAGCAGGCTGGGCCCAGAGC...GCTGGGCAGCCGGGCTCTGACACAGTCAGCAGCTCCGGGCGCCGCAGGCCGGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CAA 72 bp CCCCGCCCAGGTACTCAGGGCCCTGCCTTCGTGGCCTaGTCCGCTCGCCGCGGGTGGGGCTGGCACAAGGCC +
Preference number: 4 (lower is better)
Translates to: PRPGTQGPAFVA*SARRGWGWHKA
Trigger: GGCCTTGTGCCAGCCCCACCCGCGGCGAGCGGACAAGGCCACGAAGGCAGGGCCCTGAGTACCTGGGCGGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp GGGGTCCCCAGGCTCTTCCGATTGGCTCAGGTGCCCTCTCCTGCGGTGGCGGGCCCCCTCGAGGCAGGTTaGGCCCCGGCCTGGACCGCC +
Preference number: 4 (lower is better)
Translates to: GVPRLFRLAQVPSPAVAGPLEAG*APAWTA
Trigger: GGCGGTCCAGGCCGGGGCTCAACCTGCCTCGAGGGG...GCCCGCCACCGCAGGAGAGGGCACCTGAGCCAATCGGAAGAGCCTGGGGACCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp CGCCGGCCTGCGGCGCCCGGAGCTGCTGACTGTGTCAGAGCCCGGCTGCCCAGCGCCAGGGCCATCAGGTaGCCTGACCCCCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RRPAAPGAADCVRARLPSARAIR*PDPLAG
Trigger: TCCAGCCAGGGGGTCAGGGCACCTGATGGCCCTGGC...GCTGGGCAGCCGGGCTCTGACACAGTCAGCAGCTCCGGGCGCCGCAGGCCGGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp CGCCGGCCTGCGGCGCCCGGAGCTGCTGACTGTGTCAGAGCCCGGCTGCCCAGCTGGACCGCCCCACGCTaGCTTCCGTCCACGCAGAGC +
Preference number: 4 (lower is better)
Translates to: RRPAAPGAADCVRARLPSWTAPR*LPSTQS
Trigger: GCTCTGCGTGGACGGAAGGCAGCGTGGGGCGGTCCA...GCTGGGCAGCCGGGCTCTGACACAGTCAGCAGCTCCGGGCGCCGCAGGCCGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp GCGCCTGGCCAGGGCTCCCCTGTGGCTGGCGTGTGGAGACACGTGGGCCCTTCTCACCGTACTGTCCCCTaGCGGGCCCTGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: APGQGSPVAGVWRHVGPSHRTVP*RALGLG
Trigger: CCCCAGGCCCAGGGCCCGTCAGGGGACAGTACGGTG...AGAAGGGCCCACGTGTCTCCACACGCCAGCCACAGGGGAGCCCTGGCCAGGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp CGCCGGCCTGCGGCGCCCGGAGCTGCTGACTGTGTCAGAGCCCGGCTGCCCAGCTGGCTGGAGGGAGGATaGGAAGTGGGCTCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: RRPAAPGAADCVRARLPSWLEGG*EVGSEG
Trigger: GCCCTCGGAGCCCACTTCCCATCCTCCCTCCAGCCA...GCTGGGCAGCCGGGCTCTGACACAGTCAGCAGCTCCGGGCGCCGCAGGCCGGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp CGCCGGCCTGCGGCGCCCGGAGCTGCTGACTGTGTCAGAGCCCGGCTGCCCAGCGACACGGGGGCCGCCTaGTGGGTCTATTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: RRPAAPGAADCVRARLPSDTGAA*WVYSCG
Trigger: CCCACAGGAATAGACCCACCAGGCGGCCCCCGTGTC...GCTGGGCAGCCGGGCTCTGACACAGTCAGCAGCTCCGGGCGCCGCAGGCCGGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCCCTGGTCCCCAGGGTaGACGGAGCCGCTGTCACCG +
Preference number: 4 (lower is better)
Translates to: GPRRTGRSGWPVLSRLGVPWSPG*TEPLSP
Trigger: CGGTGACAGCGGCTCCGTCCACCCTGGGGACCAGGG...AACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp CGCCGGCCTGCGGCGCCCGGAGCTGCTGACTGTGTCAGAGCCCGGCTGCCCAGCACAGGCCGCAGCGGGTaGCCGGTTCTGTCCCGTCTT +
Preference number: 4 (lower is better)
Translates to: RRPAAPGAADCVRARLPSTGRSG*PVLSRL
Trigger: AAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGT...GCTGGGCAGCCGGGCTCTGACACAGTCAGCAGCTCCGGGCGCCGCAGGCCGGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR TCA 90 bp GCGCCTGGCCAGGGCTCCCCTGTGGCTGGCGTGTGGAGACACGTGGGCCCTTCTCTGTGCCCGCCCTGCTaGGTCCCTCGGAGACCCCAG +
Preference number: 4 (lower is better)
Translates to: APGQGSPVAGVWRHVGPSLCPPC*VPRRPQ
Trigger: CTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAG...AGAAGGGCCCACGTGTCTCCACACGCCAGCCACAGGGGAGCCCTGGCCAGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGTGACAGCGGAGGCCCGGGCTaGCCGCCGTCCCCCTTCATC +
Preference number: 4 (lower is better)
Translates to: VPALLSPSETPGPAVPGDSGGPG*PPSPFI
Trigger: GATGAAGGGGGACGGCGGGCAGCCCGGGCCTCCGCT...GTCACCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp GTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGTGACGGTGGCGGGCCCACCTaGGTGCCTGCCAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: VPALLSPSETPGPAVPGDGGGPT*VPARAI
Trigger: GATGGCCCTGGCAGGCACCCAGGTGGGCCCGCCACC...GTCACCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GTCCGCTCGCCGCGGGTGGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGAGGTGCCCTCTCCTGCGGTaGCGGGCCCACCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: VRSPRVGLAQGPFWRKWRCPLLR*RAHLGA
Trigger: GGCACCCAGGTGGGCCCGCCACCGCAGGAGAGGGCA...CCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGAGCGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GTCTGTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGACACGCTCCCCTGGCTaGGCGCCTGGCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: VCARPAESLGDPRSRCSWTRSPG*APGQGS
Trigger: GGAGCCCTGGCCAGGCGCCCAGCCAGGGGAGCGTGT...CCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGTGACAGGCACACGCTCCCCTaGCTGGGCGCCTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: VPALLSPSETPGPAVPGDRHTLP*LGAWPG
Trigger: CCCTGGCCAGGCGCCCAGCCAGGGGAGCGTGTGCCT...GTCACCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GGGGTCCCCAGGCTCTTCCGATTGGCTCAGGTGCCCTCTCCTGCGGTGGCGGGCAGGCAGGTGCCCAGGTaGGAGCCCCCTCTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: GVPRLFRLAQVPSPAVAGRQVPR*EPPLCP
Trigger: GGGGCACAGAGGGGGCTCCCACCTGGGCACCTGCCT...GCCCGCCACCGCAGGAGAGGGCACCTGAGCCAATCGGAAGAGCCTGGGGACCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GCGCCTGGCCAGGGCTCCCCTGTGGCTGGCGTGTGGAGACACGTGGGCCCTTCTGCCGCGGTCCCGGGGTaGTGCCCACTGGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: APGQGSPVAGVWRHVGPSAAVPG*CPLELP
Trigger: AGGAAGCTCCAGTGGGCACCACCCCGGGACCGCGGC...AGAAGGGCCCACGTGTCTCCACACGCCAGCCACAGGGGAGCCCTGGCCAGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GGGGTCCCCAGGCTCTTCCGATTGGCTCAGGTGCCCTCTCCTGCGGTGGCGGGCCCCACCCTGCGGCTCTaGGCCCAGCCTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GVPRLFRLAQVPSPAVAGPTLRL*AQPAPP
Trigger: AGGAGGAGCAGGCTGGGCCCAGAGCCGCAGGGTGGG...GCCCGCCACCGCAGGAGAGGGCACCTGAGCCAATCGGAAGAGCCTGGGGACCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp CCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCCGCCCTGCTGAGTCCCTCGGACTGCGGCCAGTTCGCTaGCACCAGGGGGACGCCGGC +
Preference number: 4 (lower is better)
Translates to: PSLARTPLVCARPAESLGLRPVR*HQGDAG
Trigger: GCCGGCGTCCCCCTGGTGTCAGCGAACTGGCCGCAG...TCCGAGGGACTCAGCAGGGCGGGCACAGACCAGTGGAGTCCGGGCTAGAGAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp TGTGGAGACACGTGGGCCCTTCTCCACGTGCCCACGAGGGCCGTAGCAGGCTCCCACCGTACTGTCCCCTaGCGGGCCCTGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: CGDTWALLHVPTRAVAGSHRTVP*RALGLG
Trigger: CCCCAGGCCCAGGGCCCGTCAGGGGACAGTACGGTG...GGAGCCTGCTACGGCCCTCGTGGGCACGTGGAGAAGGGCCCACGTGTCTCCACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp ACCGCGTCCTGCTCCTCAGGCTCATGCCCTGCGGGAACAGAAGCCAAGACCCGGCCCCTCGAGGCAGGTTaGGCCCCGGCCTGGACCGCC +
Preference number: 4 (lower is better)
Translates to: TASCSSGSCPAGTEAKTRPLEAG*APAWTA
Trigger: GGCGGTCCAGGCCGGGGCTCAACCTGCCTCGAGGGG...CCGGGTCTTGGCTTCTGTTCCCGCAGGGCATGAGCCTGAGGAGCAGGACGCGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GTCTGTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGCTCCCATGGGGTCCGTaGAGCCAAGGCCCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: VCARPAESLGDPRSRCSWLPWGP*SQGPAA
Trigger: GGCTGCGGGGCCTTGGCTGCACGGACCCCATGGGAG...CCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GGGGTCCCCAGGCTCTTCCGATTGGCTCAGGTGCCCTCTCCTGCGGTGGCGGGCCCCACAGCCCCACGGTaGTGGCCAGCCTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: GVPRLFRLAQVPSPAVAGPTAPR*WPASQV
Trigger: CACCTGTGAGGCTGGCCAGCACCGTGGGGCTGTGGG...GCCCGCCACCGCAGGAGAGGGCACCTGAGCCAATCGGAAGAGCCTGGGGACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp CGCCGGCCTGCGGCGCCCGGAGCTGCTGACTGTGTCAGAGCCCGGCTGCCCAGCCTGGAGCTTCCTGTCTaGTCTCCACGCCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: RRPAAPGAADCVRARLPSLELPV*SPRPVP
Trigger: AGGCACTGGGCGTGGAGAGCAGACAGGAAGCTCCAG...GCTGGGCAGCCGGGCTCTGACACAGTCAGCAGCTCCGGGCGCCGCAGGCCGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GGGGTCCCCAGGCTCTTCCGATTGGCTCAGGTGCCCTCTCCTGCGGTGGCGGGCGAAAAGCCACGGGCCTaGCCGCATGCCGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: GVPRLFRLAQVPSPAVAGEKPRA*PHAVPT
Trigger: GGTGGGGACGGCATGCGGGCAGGCCCGTGGCTTTTC...GCCCGCCACCGCAGGAGAGGGCACCTGAGCCAATCGGAAGAGCCTGGGGACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp GCGCCTGGCCAGGGCTCCCCTGTGGCTGGCGTGTGGAGACACGTGGGCCCTTCTCTGAGTGTCCCCATCTaGCCCACCCGGAGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: APGQGSPVAGVWRHVGPSLSVPI*PTRSPL
Trigger: CAGGGGGCTCCGGGTGGGGCAGATGGGGACACTCAG...AGAAGGGCCCACGTGTCTCCACACGCCAGCCACAGGGGAGCCCTGGCCAGGCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp GGGGTCCCCAGGCTCTTCCGATTGGCTCAGGTGCCCTCTCCTGCGGTGGCGGGCCGAGGGCCTCACAGGTaGGCTCTCAGGAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GVPRLFRLAQVPSPAVAGRGPHR*ALRRGP
Trigger: GGGGCCTCTCCTGAGAGCCCACCTGTGAGGCCCTCG...GCCCGCCACCGCAGGAGAGGGCACCTGAGCCAATCGGAAGAGCCTGGGGACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GGGGTCCCCAGGCTCTTCCGATTGGCTCAGGTGCCCTCTCCTGCGGTGGCGGGCCGCCGCGGGTGGGGCTaGCACAAGGCCCGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: GVPRLFRLAQVPSPAVAGRRGWG*HKARFG
Trigger: TCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCG...GCCCGCCACCGCAGGAGAGGGCACCTGAGCCAATCGGAAGAGCCTGGGGACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GTCCGCTCGCCGCGGGTGGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGAGGGCTTGGCGGGTGCGCTaGGCCCAGATACGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: VRSPRVGLAQGPFWRKWRAWRVR*AQIRGS
Trigger: GGAGCCGCGTATCTGGGCCCAGCGCACCCGCCAAGC...CCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGAGCGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCCACGGGGGAGGTGCTaGTCAGGTGACCACGTCCTG +
Preference number: 4 (lower is better)
Translates to: GPRRTGRSGWPVLSRLGVPRGRC*SGDHVL
Trigger: CAGGACGTGGTCACCTGACCAGCACCTCCCCCGTGG...AACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp GGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTGGAGAAGGGACTCCCTaGTCCCCAGGGTGGACGGAG +
Preference number: 4 (lower is better)
Translates to: GPRRTGRSGWPVLSRLGVGEGTP*SPGWTE
Trigger: CTCCGTCCACCCTGGGGACCAGGGAGTCCCTTCTCC...AACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR TCA 90 bp GTCCGCTCGCCGCGGGTGGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGAGGCCCATCTCAGCCTCCTaGGTAGCTGGGACCGCCGGC +
Preference number: 4 (lower is better)
Translates to: VRSPRVGLAQGPFWRKWRPISAS*VAGTAG
Trigger: GCCGGCGGTCCCAGCTACTCAGGAGGCTGAGATGGG...CCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGAGCGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp GGGGTCCCCAGGCTCTTCCGATTGGCTCAGGTGCCCTCTCCTGCGGTGGCGGGCACCCCCACCGCGTCCTaGTCCTCAGGCTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: GVPRLFRLAQVPSPAVAGTPTAS*SSGSCP
Trigger: AGGGCATGAGCCTGAGGAGCAGGACGCGGTGGGGGT...GCCCGCCACCGCAGGAGAGGGCACCTGAGCCAATCGGAAGAGCCTGGGGACCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GTCTGTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGCCTGGACCACGAGGCTaGCCACCCCAGACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: VCARPAESLGDPRSRCSWPGPRG*PPQTGG
Trigger: CCCACCTGTCTGGGGTGGGCAGCCTCGTGGTCCAGG...CCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGTGACCCTGGACCACGAGGCTaGCCACCCCAGACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: VPALLSPSETPGPAVPGDPGPRG*PPQTGG
Trigger: CCCACCTGTCTGGGGTGGGCAGCCTCGTGGTCCAGG...GTCACCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp TCGCCGCGGGTGGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGAGGCTCCCATGGGAGCCCCCTCTGTaGCCCCTGGGAGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: SPRVGLAQGPFWRKWRLPWEPPL*PLGVSP
Trigger: GGGGGACACTCCCAGGGGGCACAGAGGGGGCTCCCA...TGGGAGCCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp CGCCGGCCTGCGGCGCCCGGAGCTGCTGACTGTGTCAGAGCCCGGCTGCCCAGCGTAACGTTGCTCCTGTaGCACGGTGTAGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: RRPAAPGAADCVRARLPSVTLLL*HGVGAQ
Trigger: CTGCGCTCCTACACCGTGCCACAGGAGCAACGTTAC...GCTGGGCAGCCGGGCTCTGACACAGTCAGCAGCTCCGGGCGCCGCAGGCCGGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GCGCCTGGCCAGGGCTCCCCTGTGGCTGGCGTGTGGAGACACGTGGGCCCTTCTTGGGCGCCTCGTGCGTaGCCTGCTGCGTGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: APGQGSPVAGVWRHVGPSWAPRA*PAACSA
Trigger: AGCACTACACGCAGCAGGCCACGCACGAGGCGCCCA...AGAAGGGCCCACGTGTCTCCACACGCCAGCCACAGGGGAGCCCTGGCCAGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp ACCACGAGGCTGCCCACCCCAGACAGGTGGGACCCCTTTCCCGCATGCAGACTCGGTGGCGGGCCCACCTaGGTGCCTGCCAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: TTRLPTPDRWDPFPACRLGGGPT*VPARAI
Trigger: GATGGCCCTGGCAGGCACCCAGGTGGGCCCGCCACC...GAGTCTGCATGCGGGAAAGGGGTCCCACCTGTCTGGGGTGGGCAGCCTCGTGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp ACCGCGTCCTGCTCCTCAGGCTCATGCCCTGCGGGAACAGAAGCCAAGACCCGGAGGCACACGCTCCCCTaGCTGGGCGCCTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TASCSSGSCPAGTEAKTRRHTLP*LGAWPG
Trigger: CCCTGGCCAGGCGCCCAGCCAGGGGAGCGTGTGCCT...CCGGGTCTTGGCTTCTGTTCCCGCAGGGCATGAGCCTGAGGAGCAGGACGCGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGTGACATCAGGCAGCCGGGCTaGGCCCTGCAGACCCACTGG +
Preference number: 4 (lower is better)
Translates to: VPALLSPSETPGPAVPGDIRQPG*ALQTHW
Trigger: CCAGTGGGTCTGCAGGGCCCAGCCCGGCTGCCTGAT...GTCACCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGTGACCCGACGGGTGTGAGTTaGGGGCACAGAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: VPALLSPSETPGPAVPGDPTGVS*GHRAPA
Trigger: GGCTGGGGCTCTGTGCCCCCAACTCACACCCGTCGG...GTCACCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp CGGGGTGGTGCCCACTGGAGCTTCCTGTCTGCTCTCCACGCCCAGTGCCTGAGCCCCACCCTGCGGCTCTaGGCCCAGCCTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RGGAHWSFLSALHAQCLSPTLRL*AQPAPP
Trigger: AGGAGGAGCAGGCTGGGCCCAGAGCCGCAGGGTGGG...GCTCAGGCACTGGGCGTGGAGAGCAGACAGGAAGCTCCAGTGGGCACCACCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp GTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGTGACAGTGGCTCCTGGGGCTaGTGGCTGGGTGATCCCAGG +
Preference number: 4 (lower is better)
Translates to: VPALLSPSETPGPAVPGDSGSWG*WLGDPR
Trigger: CCTGGGATCACCCAGCCATCAGCCCCAGGAGCCACT...GTCACCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp ACCACGAGGCTGCCCACCCCAGACAGGTGGGACCCCTTTCCCGCATGCAGACTCGGCGCCCGGAGCTGCTaGCTGTGTCAGAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: TTRLPTPDRWDPFPACRLGARSC*LCQSPA
Trigger: AGCCGGGCTCTGACACAGTCAGCAGCTCCGGGCGCC...GAGTCTGCATGCGGGAAAGGGGTCCCACCTGTCTGGGGTGGGCAGCCTCGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp GTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGTGACTGCCCGCTGGTTCTGTaGCCCATCCCAGGCACACGC +
Preference number: 4 (lower is better)
Translates to: VPALLSPSETPGPAVPGDCPLVL*PIPGTR
Trigger: GCGTGTGCCTGGGATGGGTCACAGAACCAGCGGGCA...GTCACCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp GTCTGTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGCAGACGGGGAAGCTGTaGAAGGAGACACCGCCCCGC +
Preference number: 4 (lower is better)
Translates to: VCARPAESLGDPRSRCSWQTGKL*KETPPR
Trigger: GCGGGGCGGTGTCTCCTTTCACAGCTTCCCCGTCTG...CCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp GTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGTGACCAGACGGGGAAGCTGTaGAAGGAGACACCGCCCCGC +
Preference number: 4 (lower is better)
Translates to: VPALLSPSETPGPAVPGDQTGKL*KETPPR
Trigger: GCGGGGCGGTGTCTCCTTTCACAGCTTCCCCGTCTG...GTCACCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp ACCGCGTCCTGCTCCTCAGGCTCATGCCCTGCGGGAACAGAAGCCAAGACCCGGGGGAGCCGACGGGTGTaGGTTGGGGGCACAGAGCCC +
Preference number: 4 (lower is better)
Translates to: TASCSSGSCPAGTEAKTRGSRRV*VGGTEP
Trigger: GGGCTCTGTGCCCCCAACTCACACCCGTCGGCTCCC...CCGGGTCTTGGCTTCTGTTCCCGCAGGGCATGAGCCTGAGGAGCAGGACGCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp ACCACGAGGCTGCCCACCCCAGACAGGTGGGACCCCTTTCCCGCATGCAGACTCGGGAGCCGACGGGTGTaGGTTGGGGGCACAGAGCCC +
Preference number: 4 (lower is better)
Translates to: TTRLPTPDRWDPFPACRLGSRRV*VGGTEP
Trigger: GGGCTCTGTGCCCCCAACTCACACCCGTCGGCTCCC...GAGTCTGCATGCGGGAAAGGGGTCCCACCTGTCTGGGGTGGGCAGCCTCGTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp TGGGCTCCGAGGGCCTCACAGGTGGGCTCTCAGGAGAGGCCCCACCTTTGGCAGCCCCCACCCAACCTGTaGTGCGGGCCCCAGACACAC +
Preference number: 4 (lower is better)
Translates to: WAPRASQVGSQERPHLWQPPPNL*CGPQTH
Trigger: GTGTGTCTGGGGCCCGCAGCACAGGTTGGGTGGGGG...CTGCCAAAGGTGGGGCCTCTCCTGAGAGCCCACCTGTGAGGCCCTCGGAGCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp CGGGGTGGTGCCCACTGGAGCTTCCTGTCTGCTCTCCACGCCCAGTGCCTGAGCCTTGCCCACTTCTGCTaGCCCTGCCCCAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: RGGAHWSFLSALHAQCLSLAHFC*PCPSPH
Trigger: GTGGGGGCTGGGGCAGGGGCAGCAGAAGTGGGCAAG...GCTCAGGCACTGGGCGTGGAGAGCAGACAGGAAGCTCCAGTGGGCACCACCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp CGGGGTGGTGCCCACTGGAGCTTCCTGTCTGCTCTCCACGCCCAGTGCCTGAGCGCGGTCCCGGGGTGGTaGCCACTGGAGCTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: RGGAHWSFLSALHAQCLSAVPGW*PLELPV
Trigger: GACAGGAAGCTCCAGTGGGCACCACCCCGGGACCGC...GCTCAGGCACTGGGCGTGGAGAGCAGACAGGAAGCTCCAGTGGGCACCACCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GCGCCTGGCCAGGGCTCCCCTGTGGCTGGCGTGTGGAGACACGTGGGCCCTTCTTACGCGGCTCCTGCCTaGCTCATGGCCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: APGQGSPVAGVWRHVGPSYAAPA*LMACSS
Trigger: AGAGGAGCAGGCCATGAGGCAGGCAGGAGCCGCGTA...AGAAGGGCCCACGTGTCTCCACACGCCAGCCACAGGGGAGCCCTGGCCAGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GGGGTCCCCAGGCTCTTCCGATTGGCTCAGGTGCCCTCTCCTGCGGTGGCGGGCCAGATACGCGGCTCCTaGCTGCCTCATGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GVPRLFRLAQVPSPAVAGQIRGS*LPHGLL
Trigger: GAGCAGGCCATGAGGCAGGCAGGAGCCGCGTATCTG...GCCCGCCACCGCAGGAGAGGGCACCTGAGCCAATCGGAAGAGCCTGGGGACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGTGACAGAGAGCTTGGCGGGTaGGCTGGGCCCAGATACGCG +
Preference number: 4 (lower is better)
Translates to: VPALLSPSETPGPAVPGDRELGG*AGPRYA
Trigger: CGCGTATCTGGGCCCAGCGCACCCGCCAAGCTCTCT...GTCACCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp TGTGGAGACACGTGGGCCCTTCTCCACGTGCCCACGAGGGCCGTAGCAGGCTCCGGGGCTCCTGGAGGCTaGGGACAGACGGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: CGDTWALLHVPTRAVAGSGAPGG*GQTGKL
Trigger: CAGCTTCCCCGTCTGTCCGCAGCCTCCAGGAGCCCC...GGAGCCTGCTACGGCCCTCGTGGGCACGTGGAGAAGGGCCCACGTGTCTCCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GGGGTCCCCAGGCTCTTCCGATTGGCTCAGGTGCCCTCTCCTGCGGTGGCGGGCGAGAGGCCCCACCTTTaGCAGGAGTTGGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GVPRLFRLAQVPSPAVAGERPHL*QELVGG
Trigger: CCCACCCACCAACTCCTGCCAAAGGTGGGGCCTCTC...GCCCGCCACCGCAGGAGAGGGCACCTGAGCCAATCGGAAGAGCCTGGGGACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TCGCCGCGGGTGGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGAGGCTCCCACCTGGGGCTGATGGCTaGGTGATCCCAGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SPRVGLAQGPFWRKWRLPPGADG*VIPGGP
Trigger: GGGACCCCCTGGGATCACCCAGCCATCAGCCCCAGG...TGGGAGCCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GTCTGTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGGCGTGTGGAGACACGTaGGCCCTTCTCCACGTGCCC +
Preference number: 4 (lower is better)
Translates to: VCARPAESLGDPRSRCSWACGDT*ALLHVP
Trigger: GGGCACGTGGAGAAGGGCCCACGTGTCTCCACACGC...CCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGTGGAGACACGTGGGCCCTTCTCCACGTGCCCACGAGGGCCGTAGCAGGCTCCGCCAGGGCTCCCCTGTaGCTGGCGTGTGGAGACACG +
Preference number: 4 (lower is better)
Translates to: CGDTWALLHVPTRAVAGSARAPL*LACGDT
Trigger: CGTGTCTCCACACGCCAGCCACAGGGGAGCCCTGGC...GGAGCCTGCTACGGCCCTCGTGGGCACGTGGAGAAGGGCCCACGTGTCTCCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp AGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCGGGCTGGGCCCTGCAGACCCAACACGCTCCCCTGGCTaGGCGCCTGGCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: REELSLSYQAAGLGPADPTRSPG*APGQGS
Trigger: GGAGCCCTGGCCAGGCGCCCAGCCAGGGGAGCGTGT...TGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAGATAGGCTGAGCTCCTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GGGGTCCCCAGGCTCTTCCGATTGGCTCAGGTGCCCTCTCCTGCGGTGGCGGGCACCCAGGGCCCCACCTaGCACGTGGAGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: GVPRLFRLAQVPSPAVAGTQGPT*HVEEEE
Trigger: CTCTTCTTCCTCCACGTGCCAGGTGGGGCCCTGGGT...GCCCGCCACCGCAGGAGAGGGCACCTGAGCCAATCGGAAGAGCCTGGGGACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GGGGTCCCCAGGCTCTTCCGATTGGCTCAGGTGCCCTCTCCTGCGGTGGCGGGCACGGGGGCCGCCTGGTaGGTCTATTCCTGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: GVPRLFRLAQVPSPAVAGTGAAW*VYSCGD
Trigger: ATCCCCACAGGAATAGACCCACCAGGCGGCCCCCGT...GCCCGCCACCGCAGGAGAGGGCACCTGAGCCAATCGGAAGAGCCTGGGGACCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGGGCTCCGAGGGCCTCACAGGTGGGCTCTCAGGAGAGGCCCCACCTTTGGCAGAGCGCCCCTGCACAGTaGCCGGAAGCCCGTGGACTC +
Preference number: 4 (lower is better)
Translates to: WAPRASQVGSQERPHLWQSAPAQ*PEARGL
Trigger: GAGTCCACGGGCTTCCGGCCACTGTGCAGGGGCGCT...CTGCCAAAGGTGGGGCCTCTCCTGAGAGCCCACCTGTGAGGCCCTCGGAGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp GTCTGTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGGGCACAGGTGGGAGTTaGGAGCAAAGCGGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: VCARPAESLGDPRSRCSWGTGGS*EQSGGP
Trigger: CGGGCCTCCGCTTTGCTCCCAACTCCCACCTGTGCC...CCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR TCA 90 bp GGCCTGCTTACAGAAGCGCAGGAACCCGATGGAGTAGGTCATGCCCCGGAGGCACTGCGGCCAGTTCGCTaGCACCAGGGGGACGCCGGC +
Preference number: 4 (lower is better)
Translates to: GLLTEAQEPDGVGHAPEALRPVR*HQGDAG
Trigger: GCCGGCGTCCCCCTGGTGTCAGCGAACTGGCCGCAG...TGCCTCCGGGGCATGACCTACTCCATCGGGTTCCTGCGCTTCTGTAAGCAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421923.5
CDS-3UTR TCA 90 bp GCGCCTGGCCAGGGCTCCCCTGTGGCTGGCGTGTGGAGACACGTGGGCCCTTCTGGCTCACTGTCTCCCTaGTGCCGCTGGAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: APGQGSPVAGVWRHVGPSGSLSP*CRWRCS
Trigger: AGAGCATCTCCAGCGGCATCAGGGAGACAGTGAGCC...AGAAGGGCCCACGTGTCTCCACACGCCAGCCACAGGGGAGCCCTGGCCAGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp ACCGCGTCCTGCTCCTCAGGCTCATGCCCTGCGGGAACAGAAGCCAAGACCCGGTCCCGCTGTTCCTGGTaGCCGTGGCCATGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TASCSSGSCPAGTEAKTRSRCSW*PWPWVG
Trigger: CCCCACCCATGGCCACGGTCACCAGGAACAGCGGGA...CCGGGTCTTGGCTTCTGTTCCCGCAGGGCATGAGCCTGAGGAGCAGGACGCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp GCTCCTGCCTGCCTCATGGCCTGCTCCTCTGTCGGGGCCTGTCACCGGGAAACCCCTGGGCTCAGTCTCTaGGGGTCAGGCCGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: APACLMACSSVGACHRETPGLSL*GSGRSP
Trigger: AGGACTGCGGCCTGACCCTCAGAGACTGAGCCCAGG...GGTTTCCCGGTGACAGGCCCCGACAGAGGAGCAGGCCATGAGGCAGGCAGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp TGTGGAGACACGTGGGCCCTTCTCCACGTGCCCACGAGGGCCGTAGCAGGCTCCGACGCCTCGGGCCAGTaGGGAGGTGAGGAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: CGDTWALLHVPTRAVAGSDASGQ*GGEEEP
Trigger: TGGCTCTTCCTCACCTCCGCACTGGCCCGAGGCGTC...GGAGCCTGCTACGGCCCTCGTGGGCACGTGGAGAAGGGCCCACGTGTCTCCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GGGCCCCAGACACACAGAACTGACTGCCACCTGCAGGCCGGGTCACCGTACTGTGCGGGCCCACCTGGGTaGCTGCCAGGGCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: GPQTHRTDCHLQAGSPYCAGPPG*LPGPSG
Trigger: ACCTGATGGCCCTGGCAGGCACCCAGGTGGGCCCGC...ACAGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGTCTGGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp AAGCAAGAGGCTGGGAGCTGGCCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCCTCCCATGGGGTCCGTaGAGCCAAGGCCCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: KQEAGSWPSLARTPLVCALPWGP*SQGPAA
Trigger: GGCTGCGGGGCCTTGGCTGCACGGACCCCATGGGAG...GGCACAGACCAGTGGAGTCCGGGCTAGAGAGGGCCAGCTCCCAGCCTCTTGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GCGGCTACTGTTCTTGCGGCCGCGATTTCCGAGGCCACTTGCACGCCTCCAGCTACGCCTCCAGCTTCCTaGGGGCAGGGCACGCGTCCG +
Preference number: 4 (lower is better)
Translates to: AATVLAAAISEATCTPPATPPAS*GQGTRP
Trigger: CGGACGCGTGCCCTGCCCGCAGGAAGCTGGAGGCGT...AGCTGGAGGCGTGCAAGTGGCCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GTCTGTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGGGCGGCTACTGTTCTTaGGGCCGCGATTTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: VCARPAESLGDPRSRCSWGGYCS*GRDFRG
Trigger: GCCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGCC...CCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp ACCGCGTCCTGCTCCTCAGGCTCATGCCCTGCGGGAACAGAAGCCAAGACCCGGGCGGTCCCGGGGTGGTaGCCACTGGAGCTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: TASCSSGSCPAGTEAKTRAVPGW*PLELPV
Trigger: GACAGGAAGCTCCAGTGGGCACCACCCCGGGACCGC...CCGGGTCTTGGCTTCTGTTCCCGCAGGGCATGAGCCTGAGGAGCAGGACGCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GTCTGTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGACAGGTGGGCGTCTTTaGAGCCGTGCAGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: VCARPAESLGDPRSRCSWTGGRL*SRAGRS
Trigger: GCTCCTCCCTGCACGGCTGCAAAGACGCCCACCTGT...CCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp CCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCCGCCCTGCTGAGTCCCTCGGACCAGCCTCCAGAAACTaGCCCTCGGCAGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: PSLARTPLVCARPAESLGPASRN*PSAAGP
Trigger: GGGACCTGCTGCCGAGGGGCAGTTTCTGGAGGCTGG...TCCGAGGGACTCAGCAGGGCGGGCACAGACCAGTGGAGTCCGGGCTAGAGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp CGCCGGCCTGCGGCGCCCGGAGCTGCTGACTGTGTCAGAGCCCGGCTGCCCAGCCTTGGCCTCCCCAAGTaGTGGAATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: RRPAAPGAADCVRARLPSLGLPK*WNYRCE
Trigger: CTCACACCTGTAATTCCAGCACTTGGGGAGGCCAAG...GCTGGGCAGCCGGGCTCTGACACAGTCAGCAGCTCCGGGCGCCGCAGGCCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TCGCCGCGGGTGGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGAGGCTCCCACAGTCCAGGGAGGCCTaGCCTCCAGGGAAGCCTAGC +
Preference number: 4 (lower is better)
Translates to: SPRVGLAQGPFWRKWRLPQSREA*PPGKPS
Trigger: GCTAGGCTTCCCTGGAGGCCAGGCCTCCCTGGACTG...TGGGAGCCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGTGGAGACACGTGGGCCCTTCTCCACGTGCCCACGAGGGCCGTAGCAGGCTCCGAGGCCTGGGCAGCCTaGGTCCCTACAGCACTGGCA +
Preference number: 4 (lower is better)
Translates to: CGDTWALLHVPTRAVAGSEAWAA*VPTALA
Trigger: TGCCAGTGCTGTAGGGACCCAGGCTGCCCAGGCCTC...GGAGCCTGCTACGGCCCTCGTGGGCACGTGGAGAAGGGCCCACGTGTCTCCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp CGGGGTGGTGCCCACTGGAGCTTCCTGTCTGCTCTCCACGCCCAGTGCCTGAGCTGGCTGGAGGGAGGATaGGAAGTGGGCTCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: RGGAHWSFLSALHAQCLSWLEGG*EVGSEG
Trigger: GCCCTCGGAGCCCACTTCCCATCCTCCCTCCAGCCA...GCTCAGGCACTGGGCGTGGAGAGCAGACAGGAAGCTCCAGTGGGCACCACCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp ACCGCGTCCTGCTCCTCAGGCTCATGCCCTGCGGGAACAGAAGCCAAGACCCGGGGGCTCCCCTGTGGCTaGCGTGTGGAGACACGTGGG +
Preference number: 4 (lower is better)
Translates to: TASCSSGSCPAGTEAKTRGLPCG*RVETRG
Trigger: CCCACGTGTCTCCACACGCCAGCCACAGGGGAGCCC...CCGGGTCTTGGCTTCTGTTCCCGCAGGGCATGAGCCTGAGGAGCAGGACGCGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGTGGAGACACGTGGGCCCTTCTCCACGTGCCCACGAGGGCCGTAGCAGGCTCCCCCACCCCAGACAGGTaGGACCCCTTTCCCGCATGC +
Preference number: 4 (lower is better)
Translates to: CGDTWALLHVPTRAVAGSPTPDR*DPFPAC
Trigger: GCATGCGGGAAAGGGGTCCCACCTGTCTGGGGTGGG...GGAGCCTGCTACGGCCCTCGTGGGCACGTGGAGAAGGGCCCACGTGTCTCCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGCCTGTCCCTCACCGGGGTCAGGATCCGGGCACTACGTGTAAGTGGCTTTCCCTCCGCTCGCCGCGGGTaGGGCTGGCACAAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: CLSLTGVRIRALRVSGFPSARRG*GWHKAR
Trigger: ACGGGCCTTGTGCCAGCCCCACCCGCGGCGAGCGGA...GGGAAAGCCACTTACACGTAGTGCCCGGATCCTGACCCCGGTGAGGGACAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp AAGCAAGAGGCTGGGAGCTGGCCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCAGGGCCCTGCCTTCGTaGCCTTGTCCGCTCGCCGCG +
Preference number: 4 (lower is better)
Translates to: KQEAGSWPSLARTPLVCARALPS*PCPLAA
Trigger: CGCGGCGAGCGGACAAGGCCACGAAGGCAGGGCCCT...GGCACAGACCAGTGGAGTCCGGGCTAGAGAGGGCCAGCTCCCAGCCTCTTGCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GCGCCTGGCCAGGGCTCCCCTGTGGCTGGCGTGTGGAGACACGTGGGCCCTTCTCAGACCCACTGGCCTTaGATCCCCATGTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: APGQGSPVAGVWRHVGPSQTHWP*IPMSSA
Trigger: GGCTGAGGACATGGGGATCCAAGGCCAGTGGGTCTG...AGAAGGGCCCACGTGTCTCCACACGCCAGCCACAGGGGAGCCCTGGCCAGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GTCTGTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGGCCCTGCAGACCCACTaGCCTTGGATCCCCATGTCC +
Preference number: 4 (lower is better)
Translates to: VCARPAESLGDPRSRCSWALQTH*PWIPMS
Trigger: GGACATGGGGATCCAAGGCCAGTGGGTCTGCAGGGC...CCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGTGACGGCACAGTCCTCGGCTaGTCTGAGGGGGCATTTGGC +
Preference number: 4 (lower is better)
Translates to: VPALLSPSETPGPAVPGDGTVLG*SEGAFG
Trigger: GCCAAATGCCCCCTCAGACCAGCCGAGGACTGTGCC...GTCACCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGGGCTCCGAGGGCCTCACAGGTGGGCTCTCAGGAGAGGCCCCACCTTTGGCAGGAGAGAGGGCCTCTGTaGAGCCGGCTGCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: WAPRASQVGSQERPHLWQERGPL*SRLPGV
Trigger: GACACCAGGCAGCCGGCTCCACAGAGGCCCTCTCTC...CTGCCAAAGGTGGGGCCTCTCCTGAGAGCCCACCTGTGAGGCCCTCGGAGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp CGGGGTGGTGCCCACTGGAGCTTCCTGTCTGCTCTCCACGCCCAGTGCCTGAGCCTCCTGCCTGCCTCATaGCCTGCTCCTCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: RGGAHWSFLSALHAQCLSLLPAS*PAPLSG
Trigger: CCCCGACAGAGGAGCAGGCCATGAGGCAGGCAGGAG...GCTCAGGCACTGGGCGTGGAGAGCAGACAGGAAGCTCCAGTGGGCACCACCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGTCTGGGAGCAGAGAGCAAAGCGCCCCTGCACAGTGGCCGGAAGCCCGTGGACCCTGTGTGGGGCTCCTaGAGGCTGCGGACAGACGGG +
Preference number: 4 (lower is better)
Translates to: CLGAESKAPLHSGRKPVDPVWGS*RLRTDG
Trigger: CCCGTCTGTCCGCAGCCTCCAGGAGCCCCACACAGG...GTCCACGGGCTTCCGGCCACTGTGCAGGGGCGCTTTGCTCTCTGCTCCCAGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR CAA 72 bp GGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTaGGGGTTCTTGGTGTCCACGTCTTGTGGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: GQAAAGGRFCPV*GFLVSTSCGPW
Trigger: CCACGGCCCACAAGACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR TCA 90 bp GTCTGTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGAGATCTGGTGGCAGGTaGGCACCAGGGCAGTCCACA +
Preference number: 4 (lower is better)
Translates to: VCARPAESLGDPRSRCSWRSGGR*APGQST
Trigger: TGTGGACTGCCCTGGTGCTCACCTGCCACCAGATCT...CCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp GGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCGGAGGCGTTGTAGATaGGGGTCACATAGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: GPRRTGRSGWPVLSRLGVRRRCR*GSHRGS
Trigger: GCTACCTCTATGTGACCCTCATCTACAACGCCTCCG...AACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR TCA 90 bp GGGCCCCAGACACACAGAACTGACTGCCACCTGCAGGCCGGGTCACCGTACTGTTCTCCACCTCCGGGATaGCCCCGCACCGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GPQTHRTDCHLQAGSPYCSPPPG*PRTAPG
Trigger: TCCTGGAGCGGTGCGGGGTCATCCCGGAGGTGGAGA...ACAGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGTCTGGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp ACCACGAGGCTGCCCACCCCAGACAGGTGGGACCCCTTTCCCGCATGCAGACTCTCCGATTGGCTCAGGTaGCCTCTCCTGCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: TTRLPTPDRWDPFPACRLSDWLR*PLLRWR
Trigger: CCGCCACCGCAGGAGAGGGCACCTGAGCCAATCGGA...GAGTCTGCATGCGGGAAAGGGGTCCCACCTGTCTGGGGTGGGCAGCCTCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp TGCCTGTCCCTCACCGGGGTCAGGATCCGGGCACTACGTGTAAGTGGCTTTCCCTGGGAGCCCCCTCTGTaGCCCCTGGGAGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: CLSLTGVRIRALRVSGFPWEPPL*PLGVSP
Trigger: GGGGGACACTCCCAGGGGGCACAGAGGGGGCTCCCA...GGGAAAGCCACTTACACGTAGTGCCCGGATCCTGACCCCGGTGAGGGACAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp TGTGGAGACACGTGGGCCCTTCTCCACGTGCCCACGAGGGCCGTAGCAGGCTCCACAGGTGGGCGTCTTTaGAGCCGTGCAGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: CGDTWALLHVPTRAVAGSTGGRL*SRAGRS
Trigger: GCTCCTCCCTGCACGGCTGCAAAGACGCCCACCTGT...GGAGCCTGCTACGGCCCTCGTGGGCACGTGGAGAAGGGCCCACGTGTCTCCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GCGGCTACTGTTCTTGCGGCCGCGATTTCCGAGGCCACTTGCACGCCTCCAGCTTGGACCGCCCCACGCTaGCTTCCGTCCACGCAGAGC +
Preference number: 4 (lower is better)
Translates to: AATVLAAAISEATCTPPAWTAPR*LPSTQS
Trigger: GCTCTGCGTGGACGGAAGGCAGCGTGGGGCGGTCCA...AGCTGGAGGCGTGCAAGTGGCCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp CGGGGTGGTGCCCACTGGAGCTTCCTGTCTGCTCTCCACGCCCAGTGCCTGAGCTACGCGGCTCCTGCCTaGCTCATGGCCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RGGAHWSFLSALHAQCLSYAAPA*LMACSS
Trigger: AGAGGAGCAGGCCATGAGGCAGGCAGGAGCCGCGTA...GCTCAGGCACTGGGCGTGGAGAGCAGACAGGAAGCTCCAGTGGGCACCACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGTGACCCGTGGGCTTCTACCTaGCCTTGGCCTGCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: VPALLSPSETPGPAVPGDPWAST*PWPAVL
Trigger: AAGCACTGCAGGCCAAGGGCAGGTAGAAGCCCACGG...GTCACCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp ACCACGAGGCTGCCCACCCCAGACAGGTGGGACCCCTTTCCCGCATGCAGACTCCAGTCCAGGGAGGCCTaGCCTCCAGGGAAGCCTAGC +
Preference number: 4 (lower is better)
Translates to: TTRLPTPDRWDPFPACRLQSREA*PPGKPS
Trigger: GCTAGGCTTCCCTGGAGGCCAGGCCTCCCTGGACTG...GAGTCTGCATGCGGGAAAGGGGTCCCACCTGTCTGGGGTGGGCAGCCTCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGGGCTCCGAGGGCCTCACAGGTGGGCTCTCAGGAGAGGCCCCACCTTTGGCAGAACTTGAGGACGGGCTaGAAGGGCCGCAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: WAPRASQVGSQERPHLWQNLRTG*KGRRSS
Trigger: GGAGCTCCTGCGGCCCTTCCAGCCCGTCCTCAAGTT...CTGCCAAAGGTGGGGCCTCTCCTGAGAGCCCACCTGTGAGGCCCTCGGAGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGTGGAGACACGTGGGCCCTTCTCCACGTGCCCACGAGGGCCGTAGCAGGCTCCAACTTGAGGACGGGCTaGAAGGGCCGCAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: CGDTWALLHVPTRAVAGSNLRTG*KGRRSS
Trigger: GGAGCTCCTGCGGCCCTTCCAGCCCGTCCTCAAGTT...GGAGCCTGCTACGGCCCTCGTGGGCACGTGGAGAAGGGCCCACGTGTCTCCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGTCTGGGAGCAGAGAGCAAAGCGCCCCTGCACAGTGGCCGGAAGCCCGTGGACTGGGCGCCTCGTGCGTaGCCTGCTGCGTGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: CLGAESKAPLHSGRKPVDWAPRA*PAACSA
Trigger: AGCACTACACGCAGCAGGCCACGCACGAGGCGCCCA...GTCCACGGGCTTCCGGCCACTGTGCAGGGGCGCTTTGCTCTCTGCTCCCAGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp TGGGCTCCGAGGGCCTCACAGGTGGGCTCTCAGGAGAGGCCCCACCTTTGGCAGGAGAGGCCCCACCTTTaGCAGGAGTTGGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: WAPRASQVGSQERPHLWQERPHL*QELVGG
Trigger: CCCACCCACCAACTCCTGCCAAAGGTGGGGCCTCTC...CTGCCAAAGGTGGGGCCTCTCCTGAGAGCCCACCTGTGAGGCCCTCGGAGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GCGGCTACTGTTCTTGCGGCCGCGATTTCCGAGGCCACTTGCACGCCTCCAGCTCGAGGGCCTCACAGGTaGGCTCTCAGGAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: AATVLAAAISEATCTPPARGPHR*ALRRGP
Trigger: GGGGCCTCTCCTGAGAGCCCACCTGTGAGGCCCTCG...AGCTGGAGGCGTGCAAGTGGCCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp ACCACGAGGCTGCCCACCCCAGACAGGTGGGACCCCTTTCCCGCATGCAGACTCCTCTCCGCCCCACAGTaGCTCCTGGGGCTGATGGCT +
Preference number: 4 (lower is better)
Translates to: TTRLPTPDRWDPFPACRLLSAPQ*LLGLMA
Trigger: AGCCATCAGCCCCAGGAGCCACTGTGGGGCGGAGAG...GAGTCTGCATGCGGGAAAGGGGTCCCACCTGTCTGGGGTGGGCAGCCTCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp AGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCGGGCTGGGCCCTGCAGACCCAGGGCTCCCCTGTGGCTaGCGTGTGGAGACACGTGGG +
Preference number: 4 (lower is better)
Translates to: REELSLSYQAAGLGPADPGLPCG*RVETRG
Trigger: CCCACGTGTCTCCACACGCCAGCCACAGGGGAGCCC...TGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAGATAGGCTGAGCTCCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GGGCCCCAGACACACAGAACTGACTGCCACCTGCAGGCCGGGTCACCGTACTGTGCCAGGGCTCCCCTGTaGCTGGCGTGTGGAGACACG +
Preference number: 4 (lower is better)
Translates to: GPQTHRTDCHLQAGSPYCARAPL*LACGDT
Trigger: CGTGTCTCCACACGCCAGCCACAGGGGAGCCCTGGC...ACAGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGTCTGGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGGGCTCCGAGGGCCTCACAGGTGGGCTCTCAGGAGAGGCCCCACCTTTGGCAGACGGGGGCCGCCTGGTaGGTCTATTCCTGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: WAPRASQVGSQERPHLWQTGAAW*VYSCGD
Trigger: ATCCCCACAGGAATAGACCCACCAGGCGGCCCCCGT...CTGCCAAAGGTGGGGCCTCTCCTGAGAGCCCACCTGTGAGGCCCTCGGAGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGTGGAGACACGTGGGCCCTTCTCCACGTGCCCACGAGGGCCGTAGCAGGCTCCTCGGCAGCAGGTCCCTaGGGACCTGCTGACAGAGTG +
Preference number: 4 (lower is better)
Translates to: CGDTWALLHVPTRAVAGSSAAGP*GPADRV
Trigger: CACTCTGTCAGCAGGTCCCCAGGGACCTGCTGCCGA...GGAGCCTGCTACGGCCCTCGTGGGCACGTGGAGAAGGGCCCACGTGTCTCCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp ACCTCAGGCAACTTGCTCCGTCTCTCTGGGCTCGGTCGCTGTCCCAGCTGGCTTGCTTGGCGGGTGCGCTaGGCCCAGATACGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: TSGNLLRLSGLGRCPSWLAWRVR*AQIRGS
Trigger: GGAGCCGCGTATCTGGGCCCAGCGCACCCGCCAAGC...AAGCCAGCTGGGACAGCGACCGAGCCCAGAGAGACGGAGCAAGTTGCCTGAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GCGGCTACTGTTCTTGCGGCCGCGATTTCCGAGGCCACTTGCACGCCTCCAGCTCCTGTGTGGGGCTCCTaGAGGCTGCGGACAGACGGG +
Preference number: 4 (lower is better)
Translates to: AATVLAAAISEATCTPPAPVWGS*RLRTDG
Trigger: CCCGTCTGTCCGCAGCCTCCAGGAGCCCCACACAGG...AGCTGGAGGCGTGCAAGTGGCCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GCTCCTGCCTGCCTCATGGCCTGCTCCTCTGTCGGGGCCTGTCACCGGGAAACCGTGGCCGGAAGCCCGTaGACTCCTCCGAAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: APACLMACSSVGACHRETVAGSP*TPPKSH
Trigger: GTGGCTTTTCGGAGGAGTCCACGGGCTTCCGGCCAC...GGTTTCCCGGTGACAGGCCCCGACAGAGGAGCAGGCCATGAGGCAGGCAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp GGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTGCTGGTGCTTTCAGCTaGGGCTTTCTTGGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: GPRRTGRSGWPVLSRLGVAGAFS*GFLGPR
Trigger: TCTTGGCCCAAGAAAGCCCCAGCTGAAAGCACCAGC...AACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp AGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCGGGCTGGGCCCTGCAGACCCAACTGTACCAGGCAGCTaGGCCCCGCAGGACAGGCCG +
Preference number: 4 (lower is better)
Translates to: REELSLSYQAAGLGPADPTVPGS*APQDRP
Trigger: CGGCCTGTCCTGCGGGGCCCAGCTGCCTGGTACAGT...TGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAGATAGGCTGAGCTCCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp TCAGTCTCTGAGGGTCAGGCCGCAGTCCTGAGTGTCCCCATCTGCCCCACCCGGGGGCACGGGCACAGGTaGGAGTTGGGAGCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: SVSEGQAAVLSVPICPTRGHGHR*ELGAKR
Trigger: CCGCTTTGCTCCCAACTCCCACCTGTGCCCGTGCCC...CCGGGTGGGGCAGATGGGGACACTCAGGACTGCGGCCTGACCCTCAGAGACTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR TCA 90 bp TGTGGAGACACGTGGGCCCTTCTCCACGTGCCCACGAGGGCCGTAGCAGGCTCCGGCTCACTGTCTCCCTaGTGCCGCTGGAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: CGDTWALLHVPTRAVAGSGSLSP*CRWRCS
Trigger: AGAGCATCTCCAGCGGCATCAGGGAGACAGTGAGCC...GGAGCCTGCTACGGCCCTCGTGGGCACGTGGAGAAGGGCCCACGTGTCTCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCGGCGCCCGGAGCTGCTaGCTGTGTCAGAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSGARSC*LCQSPA
Trigger: AGCCGGGCTCTGACACAGTCAGCAGCTCCGGGCGCC...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp GCGGTGTCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCATGCCCGCTGGTTCTGTaGCCCATCCCAGGCACACGC +
Preference number: 4 (lower is better)
Translates to: AVSGSPEREPSATHPPNACPLVL*PIPGTR
Trigger: GCGTGTGCCTGGGATGGGTCACAGAACCAGCGGGCA...TGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGACACCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp ACCGCGTCCTGCTCCTCAGGCTCATGCCCTGCGGGAACAGAAGCCAAGACCCGGCCCGCATGCAGACTCTaGGCAGCAGCCTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: TASCSSGSCPAGTEAKTRPACRL*AAASCD
Trigger: GTCACAGGAGGCTGCTGCTCAGAGTCTGCATGCGGG...CCGGGTCTTGGCTTCTGTTCCCGCAGGGCATGAGCCTGAGGAGCAGGACGCGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp TGTGGAGACACGTGGGCCCTTCTCCACGTGCCCACGAGGGCCGTAGCAGGCTCCGAAAGGCAGTGGCTGTaGTCGCACAGCCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: CGDTWALLHVPTRAVAGSERQWL*SHSPGS
Trigger: AGAGCCTGGGCTGTGCGATCACAGCCACTGCCTTTC...GGAGCCTGCTACGGCCCTCGTGGGCACGTGGAGAAGGGCCCACGTGTCTCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp GGGGTTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCTCCCTGGGGACCTGCTaGCAGAGTGAGACACGGGGG +
Preference number: 4 (lower is better)
Translates to: GVLGVHVLWAVGFYLPLASLGTC*QSETRG
Trigger: CCCCCGTGTCTCACTCTGTCAGCAGGTCCCCAGGGA...GGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR TCA 90 bp GGGCCCCAGACACACAGAACTGACTGCCACCTGCAGGCCGGGTCACCGTACTGTTCCCTGGGGACCTGCTaGCAGAGTGAGACACGGGGG +
Preference number: 4 (lower is better)
Translates to: GPQTHRTDCHLQAGSPYCSLGTC*QSETRG
Trigger: CCCCCGTGTCTCACTCTGTCAGCAGGTCCCCAGGGA...ACAGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGTCTGGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp ACCACGAGGCTGCCCACCCCAGACAGGTGGGACCCCTTTCCCGCATGCAGACTCGGCCTGAGGTGTTGCTaGCATAGGGGCTCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: TTRLPTPDRWDPFPACRLGLRCC*HRGSAP
Trigger: AGGGGCTGAGCCCCTATGTCAGCAACACCTCAGGCC...GAGTCTGCATGCGGGAAAGGGGTCCCACCTGTCTGGGGTGGGCAGCCTCGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp GTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGTGACAGTTGGGTGTGGAGGTaGGTGTGCAACAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: VPALLSPSETPGPAVPGDSWVWR*VCNSWH
Trigger: GTGCCAGCTGTTGCACACTCACCTCCACACCCAACT...GTCACCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GTCTGTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGGCCAGCAGCAGCCCTTaGCAGAACGACAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: VCARPAESLGDPRSRCSWASSSP*QNDRKM
Trigger: CATCTTCCTGTCGTTCTGGCAAGGGCTGCTGCTGGC...CCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp AAGCAAGAGGCTGGGAGCTGGCCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCACCCCCACCGCGTCCTaGTCCTCAGGCTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: KQEAGSWPSLARTPLVCATPTAS*SSGSCP
Trigger: AGGGCATGAGCCTGAGGAGCAGGACGCGGTGGGGGT...GGCACAGACCAGTGGAGTCCGGGCTAGAGAGGGCCAGCTCCCAGCCTCTTGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp TCAGTCTCTGAGGGTCAGGCCGCAGTCCTGAGTGTCCCCATCTGCCCCACCCGGGGCGGCTACTGTTCTTaGGGCCGCGATTTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: SVSEGQAAVLSVPICPTRGGYCS*GRDFRG
Trigger: GCCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGCC...CCGGGTGGGGCAGATGGGGACACTCAGGACTGCGGCCTGACCCTCAGAGACTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp TGTGGAGACACGTGGGCCCTTCTCCACGTGCCCACGAGGGCCGTAGCAGGCTCCGAACTGACTGCCACCTaGAGGCCGGGTCACCGTACT +
Preference number: 4 (lower is better)
Translates to: CGDTWALLHVPTRAVAGSELTAT*RPGHRT
Trigger: AGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTC...GGAGCCTGCTACGGCCCTCGTGGGCACGTGGAGAAGGGCCCACGTGTCTCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp TCGCCGCGGGTGGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGAGGCTCCCAGCGTCTTTGCAGCCGTaGAGGGAGGAGCTCAGCCTA +
Preference number: 4 (lower is better)
Translates to: SPRVGLAQGPFWRKWRLPASLQP*REELSL
Trigger: TAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGC...TGGGAGCCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GCTCCTGCCTGCCTCATGGCCTGCTCCTCTGTCGGGGCCTGTCACCGGGAAACCGCGTCTTTGCAGCCGTaGAGGGAGGAGCTCAGCCTA +
Preference number: 4 (lower is better)
Translates to: APACLMACSSVGACHRETASLQP*REELSL
Trigger: TAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGC...GGTTTCCCGGTGACAGGCCCCGACAGAGGAGCAGGCCATGAGGCAGGCAGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp AAGCAAGAGGCTGGGAGCTGGCCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCCCAGCCTCCAGAAACTaGCCCTCGGCAGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: KQEAGSWPSLARTPLVCAPASRN*PSAAGP
Trigger: GGGACCTGCTGCCGAGGGGCAGTTTCTGGAGGCTGG...GGCACAGACCAGTGGAGTCCGGGCTAGAGAGGGCCAGCTCCCAGCCTCTTGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GCGGCTACTGTTCTTGCGGCCGCGATTTCCGAGGCCACTTGCACGCCTCCAGCTGCCTGCCTCATGGCCTaGTCCTCTGTCGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: AATVLAAAISEATCTPPAACLMA*SSVGAC
Trigger: ACAGGCCCCGACAGAGGAGCAGGCCATGAGGCAGGC...AGCTGGAGGCGTGCAAGTGGCCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GCGGCTACTGTTCTTGCGGCCGCGATTTCCGAGGCCACTTGCACGCCTCCAGCTGTGGCTTTCCCGGACTaGTGGGCCGTGACCGTGAGG +
Preference number: 4 (lower is better)
Translates to: AATVLAAAISEATCTPPAVAFPD*WAVTVR
Trigger: CCTCACGGTCACGGCCCAGCAGTCCGGGAAAGCCAC...AGCTGGAGGCGTGCAAGTGGCCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp GTCTGTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGGCCCTTGGCCTGCAGTaGTTTGCTGGAGAAGGGACT +
Preference number: 4 (lower is better)
Translates to: VCARPAESLGDPRSRCSWALGLQ*FAGEGT
Trigger: AGTCCCTTCTCCAGCAAAGCACTGCAGGCCAAGGGC...CCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp AGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCATGCCCTCTCCTGCGGTaGCGGGCCCACCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: RWASLQPCREELSLSYQACPLLR*RAHLGA
Trigger: GGCACCCAGGTGGGCCCGCCACCGCAGGAGAGGGCA...TGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TCGCCGCGGGTGGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGAGGCTCCCACTCACAGGTGCCCGCTaGTTCTGTGACCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: SPRVGLAQGPFWRKWRLPLTGAR*FCDPSQ
Trigger: CTGGGATGGGTCACAGAACCAGCGGGCACCTGTGAG...TGGGAGCCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp AAGCAAGAGGCTGGGAGCTGGCCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCCCCACCCCAGACAGGTaGGACCCCTTTCCCGCATGC +
Preference number: 4 (lower is better)
Translates to: KQEAGSWPSLARTPLVCAPTPDR*DPFPAC
Trigger: GCATGCGGGAAAGGGGTCCCACCTGTCTGGGGTGGG...GGCACAGACCAGTGGAGTCCGGGCTAGAGAGGGCCAGCTCCCAGCCTCTTGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGTGGAGACACGTGGGCCCTTCTCCACGTGCCCACGAGGGCCGTAGCAGGCTCCAGCCCCCTTAGTCCCTaGGCGGCTACTGTTCTTGCG +
Preference number: 4 (lower is better)
Translates to: CGDTWALLHVPTRAVAGSSPLSP*AATVLA
Trigger: CGCAAGAACAGTAGCCGCCCAGGGACTAAGGGGGCT...GGAGCCTGCTACGGCCCTCGTGGGCACGTGGAGAAGGGCCCACGTGTCTCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp ACCACGAGGCTGCCCACCCCAGACAGGTGGGACCCCTTTCCCGCATGCAGACTCCGGGGTGGTGCCCACTaGAGCTTCCTGTCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: TTRLPTPDRWDPFPACRLRGGAH*SFLSAL
Trigger: GAGAGCAGACAGGAAGCTCCAGTGGGCACCACCCCG...GAGTCTGCATGCGGGAAAGGGGTCCCACCTGTCTGGGGTGGGCAGCCTCGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGGGCTCCGAGGGCCTCACAGGTGGGCTCTCAGGAGAGGCCCCACCTTTGGCAGCAGACCCACTGGCCTTaGATCCCCATGTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: WAPRASQVGSQERPHLWQQTHWP*IPMSSA
Trigger: GGCTGAGGACATGGGGATCCAAGGCCAGTGGGTCTG...CTGCCAAAGGTGGGGCCTCTCCTGAGAGCCCACCTGTGAGGCCCTCGGAGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GGGCCCCAGACACACAGAACTGACTGCCACCTGCAGGCCGGGTCACCGTACTGTGCTTTCCCGGACTGCTaGGCCGTGACCGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GPQTHRTDCHLQAGSPYCAFPDC*AVTVRL
Trigger: CAGCCTCACGGTCACGGCCCAGCAGTCCGGGAAAGC...ACAGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGTCTGGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp GTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGTGACGGCACTACGTGTAAGTaGCTTTCCCGGACTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VPALLSPSETPGPAVPGDGTTCK*LSRTAG
Trigger: CCCAGCAGTCCGGGAAAGCCACTTACACGTAGTGCC...GTCACCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp TGCCTGTCCCTCACCGGGGTCAGGATCCGGGCACTACGTGTAAGTGGCTTTCCCTGCGTTTCCAGGGCGTaGGGACCCCGGCCCCCTATG +
Preference number: 4 (lower is better)
Translates to: CLSLTGVRIRALRVSGFPCVSRA*GPRPPM
Trigger: CATAGGGGGCCGGGGTCCCCACGCCCTGGAAACGCA...GGGAAAGCCACTTACACGTAGTGCCCGGATCCTGACCCCGGTGAGGGACAGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp GTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGTGACGCTTCTACCTGCCCTTaGCCTGCAGTGCTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: VPALLSPSETPGPAVPGDASTCP*PAVLCW
Trigger: CCAGCAAAGCACTGCAGGCCAAGGGCAGGTAGAAGC...GTCACCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp GTCCGCTCGCCGCGGGTGGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGAGGCCGTCTTGGGGTTCTTaGTGTCCACGTCTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: VRSPRVGLAQGPFWRKWRPSWGS*CPRLVG
Trigger: GCCCACAAGACGTGGACACCAAGAACCCCAAGACGG...CCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGAGCGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR CAA 72 bp CCAGAAGCCCCCTTAGTCCCTGGGCGGCTACTGTTCTaGCGGCCGCGATTTCCGAGGCCACTTGCACGCCTC +
Preference number: 4 (lower is better)
Translates to: PEAPLVPGRLLF*RPRFPRPLARL
Trigger: GAGGCGTGCAAGTGGCCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGCCCAGGGACTAAGGGGGCTTCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CAA 72 bp GCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTaGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACC +
Preference number: 4 (lower is better)
Translates to: AAGGRFCPVLGF*VSTSCGPWAST
Trigger: GGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR TCA 90 bp GGGGTTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCCACGAATCTCAGCCATaGTGGCGCCCTCGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GVLGVHVLWAVGFYLPLAHESQP*WRPRLP
Trigger: TGGGAGGCGAGGGCGCCATCATGGCTGAGATTCGTG...GGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR TCA 90 bp ACCTCAGGCAACTTGCTCCGTCTCTCTGGGCTCGGTCGCTGTCCCAGCTGGCTTAGTGGCTCCTGGGGCTaGTGGCTGGGTGATCCCAGG +
Preference number: 4 (lower is better)
Translates to: TSGNLLRLSGLGRCPSWLSGSWG*WLGDPR
Trigger: CCTGGGATCACCCAGCCATCAGCCCCAGGAGCCACT...AAGCCAGCTGGGACAGCGACCGAGCCCAGAGAGACGGAGCAAGTTGCCTGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp TGGGCTCCGAGGGCCTCACAGGTGGGCTCTCAGGAGAGGCCCCACCTTTGGCAGCTGAACCAGGGAGTCTaGCCCACTCACAGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: WAPRASQVGSQERPHLWQLNQGV*PTHSSH
Trigger: ATGGGAGCTGTGAGTGGGTCAGACTCCCTGGTTCAG...CTGCCAAAGGTGGGGCCTCTCCTGAGAGCCCACCTGTGAGGCCCTCGGAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp GCTCCTGCCTGCCTCATGGCCTGCTCCTCTGTCGGGGCCTGTCACCGGGAAACCCTGAACCAGGGAGTCTaGCCCACTCACAGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: APACLMACSSVGACHRETLNQGV*PTHSSH
Trigger: ATGGGAGCTGTGAGTGGGTCAGACTCCCTGGTTCAG...GGTTTCCCGGTGACAGGCCCCGACAGAGGAGCAGGCCATGAGGCAGGCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp GCGGTGTCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCACCCGCATGCAGACTCTaGGCAGCAGCCTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: AVSGSPEREPSATHPPNAPACRL*AAASCD
Trigger: GTCACAGGAGGCTGCTGCTCAGAGTCTGCATGCGGG...TGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGACACCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp TCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGCTGTGCCCGCCCTGCTaGGTCCCTCGGAGACCCCAG +
Preference number: 4 (lower is better)
Translates to: SGSPEREPSATHPPNADLLCPPC*VPRRPQ
Trigger: CTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAG...CAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp AGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCGGGCTGGGCCCTGCAGACCCAGGCCTGAGGTGTTGCTaGCATAGGGGCTCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: REELSLSYQAAGLGPADPGLRCC*HRGSAP
Trigger: AGGGGCTGAGCCCCTATGTCAGCAACACCTCAGGCC...TGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAGATAGGCTGAGCTCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp TGGGCTCCGAGGGCCTCACAGGTGGGCTCTCAGGAGAGGCCCCACCTTTGGCAGAGTTGGGTGTGGAGGTaGGTGTGCAACAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: WAPRASQVGSQERPHLWQSWVWR*VCNSWH
Trigger: GTGCCAGCTGTTGCACACTCACCTCCACACCCAACT...CTGCCAAAGGTGGGGCCTCTCCTGAGAGCCCACCTGTGAGGCCCTCGGAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp CGGGGTGGTGCCCACTGGAGCTTCCTGTCTGCTCTCCACGCCCAGTGCCTGAGCCAGCCTTGCTTCCTGTaGGTTGGGTGTGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RGGAHWSFLSALHAQCLSQPCFL*VGCGGE
Trigger: CTCACCTCCACACCCAACTCACAGGAAGCAAGGCTG...GCTCAGGCACTGGGCGTGGAGAGCAGACAGGAAGCTCCAGTGGGCACCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp GGGGTCCCCAGGCTCTTCCGATTGGCTCAGGTGCCCTCTCCTGCGGTGGCGGGCCTGGACCACGCAGGGTaGAATCCCAACTCGAGTTTT +
Preference number: 4 (lower is better)
Translates to: GVPRLFRLAQVPSPAVAGLDHAG*NPNSSF
Trigger: AAAACTCGAGTTGGGATTTCACCCTGCGTGGTCCAG...GCCCGCCACCGCAGGAGAGGGCACCTGAGCCAATCGGAAGAGCCTGGGGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR TCA 90 bp GCGGTGTCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGAGGTGCTGGTCAGGTaGCCACGTCCTGGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: AVSGSPEREPSATHPPNAEVLVR*PRPGLS
Trigger: ACTGAGCCCAGGACGTGGTCACCTGACCAGCACCTC...TGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGACACCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp GGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTGACATTACTCATCTTTaGTGGCAGGAAGCACCTGGC +
Preference number: 4 (lower is better)
Translates to: GPRRTGRSGWPVLSRLGVDITHL*WQEAPG
Trigger: GCCAGGTGCTTCCTGCCAGCAAAGATGAGTAATGTC...AACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp GCGGTGTCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAAGGTACTCAGGGCCCTaGCTTCGTGGCCTTGTCCGC +
Preference number: 4 (lower is better)
Translates to: AVSGSPEREPSATHPPNARYSGP*LRGLVR
Trigger: GCGGACAAGGCCACGAAGGCAGGGCCCTGAGTACCT...TGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGACACCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GCGGTGTCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCACTCTGTGGAGCCGGCTaGCTGGTGTCCAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: AVSGSPEREPSATHPPNALCGAG*LVSKSL
Trigger: CAGGGACTTGGACACCAGGCAGCCGGCTCCACAGAG...TGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGACACCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GGGCCCCAGACACACAGAACTGACTGCCACCTGCAGGCCGGGTCACCGTACTGTGGAGCCCCCTGTCCATaGAGCCTCTCCCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: GPQTHRTDCHLQAGSPYCGAPCP*SLSLPV
Trigger: CACTGGAAGGGAGAGGCTGCATGGACAGGGGGCTCC...ACAGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGTCTGGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp GCTCCTGCCTGCCTCATGGCCTGCTCCTCTGTCGGGGCCTGTCACCGGGAAACCTGGCCTGCAGTGCTTTaGTGGAGAAGGGACTCCCTG +
Preference number: 4 (lower is better)
Translates to: APACLMACSSVGACHRETWPAVL*WRRDSL
Trigger: CAGGGAGTCCCTTCTCCAGCAAAGCACTGCAGGCCA...GGTTTCCCGGTGACAGGCCCCGACAGAGGAGCAGGCCATGAGGCAGGCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp TTGATGGGCTTTCCACGAATCTCAGCCATGATGGCGCCCTCGCCTCCCAGGTACCGGCCTCCTGGCCTCTaGTGCCGCCTCCTCACAGCG +
Preference number: 4 (lower is better)
Translates to: LMGFPRISAMMAPSPPRYRPPGL*CRLLTA
Trigger: CGCTGTGAGGAGGCGGCAGCAGAGGCCAGGAGGCCG...GTACCTGGGAGGCGAGGGCGCCATCATGGCTGAGATTCGTGGAAAGCCCATCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421923.5
CDS-3UTR CCA 90 bp ACCACGAGGCTGCCCACCCCAGACAGGTGGGACCCCTTTCCCGCATGCAGACTCGAGCTGTTCCCCATGTaGTCCATCTGCGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: TTRLPTPDRWDPFPACRLELFPM*SICGPA
Trigger: AGCTGGGCCGCAGATGGACCACATGGGGAACAGCTC...GAGTCTGCATGCGGGAAAGGGGTCCCACCTGTCTGGGGTGGGCAGCCTCGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp ACCGCGTCCTGCTCCTCAGGCTCATGCCCTGCGGGAACAGAAGCCAAGACCCGGAGCGCAGGAACCCGATaGAGTAGGTCATGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: TASCSSGSCPAGTEAKTRSAGTR*SRSCPG
Trigger: TCCGGGGCATGACCTACTCCATCGGGTTCCTGCGCT...CCGGGTCTTGGCTTCTGTTCCCGCAGGGCATGAGCCTGAGGAGCAGGACGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCACAGCCCCACGGTGCTaGCCAGCCTCACAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSTAPRC*PASQVP
Trigger: GGGCACCTGTGAGGCTGGCCAGCACCGTGGGGCTGT...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TCCTCGGCTGGTCTGAGGGGGCATTTGGCGGAAACTGACTTCTCCCCTGTCCTAAGGGCCCTGCCTTCGTaGCCTTGTCCGCTCGCCGCG +
Preference number: 4 (lower is better)
Translates to: SSAGLRGHLAETDFSPVLRALPS*PCPLAA
Trigger: CGCGGCGAGCGGACAAGGCCACGAAGGCAGGGCCCT...TAGGACAGGGGAGAAGTCAGTTTCCGCCAAATGCCCCCTCAGACCAGCCGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp ACCGCGTCCTGCTCCTCAGGCTCATGCCCTGCGGGAACAGAAGCCAAGACCCGGAGCCCCCTTAGTCCCTaGGCGGCTACTGTTCTTGCG +
Preference number: 4 (lower is better)
Translates to: TASCSSGSCPAGTEAKTRSPLSP*AATVLA
Trigger: CGCAAGAACAGTAGCCGCCCAGGGACTAAGGGGGCT...CCGGGTCTTGGCTTCTGTTCCCGCAGGGCATGAGCCTGAGGAGCAGGACGCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGGCCGCGGTCCCGGGGTaGTGCCCACTGGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SGSPEREPSATHPPNADLAAVPG*CPLELP
Trigger: AGGAAGCTCCAGTGGGCACCACCCCGGGACCGCGGC...CAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GCGGCTACTGTTCTTGCGGCCGCGATTTCCGAGGCCACTTGCACGCCTCCAGCTGCCCTGCAGACCCACTaGCCTTGGATCCCCATGTCC +
Preference number: 4 (lower is better)
Translates to: AATVLAAAISEATCTPPAALQTH*PWIPMS
Trigger: GGACATGGGGATCCAAGGCCAGTGGGTCTGCAGGGC...AGCTGGAGGCGTGCAAGTGGCCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp AAGCAAGAGGCTGGGAGCTGGCCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCAGCCCAGGCGGTGTCTaGGTCTCCAGAAAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: KQEAGSWPSLARTPLVCASPGGV*VSRKGA
Trigger: GGCTCCCTTTCTGGAGACCCAGACACCGCCTGGGCT...GGCACAGACCAGTGGAGTCCGGGCTAGAGAGGGCCAGCTCCCAGCCTCTTGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GTCTGTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGAAGACAGGGTCTGTCTaGGAGCAGAGAGCAAAGCGC +
Preference number: 4 (lower is better)
Translates to: VCARPAESLGDPRSRCSWKTGSV*EQRAKR
Trigger: GCGCTTTGCTCTCTGCTCCCAGACAGACCCTGTCTT...CCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp CCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCCGCCCTGCTGAGTCCCTCGGAAGTGTTCCCCTTCCCTaGGAGACATCTCGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PSLARTPLVCARPAESLGSVPLP*ETSRPA
Trigger: AGCTGGGCGAGATGTCTCCCAGGGAAGGGGAACACT...TCCGAGGGACTCAGCAGGGCGGGCACAGACCAGTGGAGTCCGGGCTAGAGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp CCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCCGCCCTGCTGAGTCCCTCGGAAAAACAGATCACATGTaGGCCCGTGTCTGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: PSLARTPLVCARPAESLGKTDHM*ARVWPP
Trigger: CGGCGGCCAGACACGGGCCCACATGTGATCTGTTTT...TCCGAGGGACTCAGCAGGGCGGGCACAGACCAGTGGAGTCCGGGCTAGAGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR TCA 90 bp TGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGGACCTGCTGACAGAGTaGGACACGGGGGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: WVSRKGALGHTPSKRRFEDLLTE*DTGAAW
Trigger: CCAGGCGGCCCCCGTGTCTCACTCTGTCAGCAGGTC...CTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp CCCTGCGGCCACCACCTAATTTATTGCCGTGCGTCCTGCTGCTGTGACTGCTTTGCGGGCCCACCTGGGTaGCTGCCAGGGCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: PCGHHLIYCRASCCCDCFAGPPG*LPGPSG
Trigger: ACCTGATGGCCCTGGCAGGCACCCAGGTGGGCCCGC...AAAGCAGTCACAGCAGCAGGACGCACGGCAATAAATTAGGTGGTGGCCGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp TCCTCGGCTGGTCTGAGGGGGCATTTGGCGGAAACTGACTTCTCCCCTGTCCTAGGCTCTGCCCTGCACTaGCCTGGACCACGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSAGLRGHLAETDFSPVLGSALH*PGPRGC
Trigger: GCAGCCTCGTGGTCCAGGGCAGTGCAGGGCAGAGCC...TAGGACAGGGGAGAAGTCAGTTTCCGCCAAATGCCCCCTCAGACCAGCCGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp ACCGCGTCCTGCTCCTCAGGCTCATGCCCTGCGGGAACAGAAGCCAAGACCCGGATTTCCGAGGCCACTTaGACGCCTCCAGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: TASCSSGSCPAGTEAKTRISEAT*TPPASC
Trigger: GCAGGAAGCTGGAGGCGTGCAAGTGGCCTCGGAAAT...CCGGGTCTTGGCTTCTGTTCCCGCAGGGCATGAGCCTGAGGAGCAGGACGCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GGGCCCCAGACACACAGAACTGACTGCCACCTGCAGGCCGGGTCACCGTACTGTGAACTGACTGCCACCTaGAGGCCGGGTCACCGTACT +
Preference number: 4 (lower is better)
Translates to: GPQTHRTDCHLQAGSPYCELTAT*RPGHRT
Trigger: AGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTC...ACAGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGTCTGGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp ACCGCGTCCTGCTCCTCAGGCTCATGCCCTGCGGGAACAGAAGCCAAGACCCGGACACACAGAACTGACTaGCACCTGCAGGCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: TASCSSGSCPAGTEAKTRTHRTD*HLQAGS
Trigger: TGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGT...CCGGGTCTTGGCTTCTGTTCCCGCAGGGCATGAGCCTGAGGAGCAGGACGCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp TGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGCCCCCACCCAACCTGTaGTGCGGGCCCCAGACACAC +
Preference number: 4 (lower is better)
Translates to: WVSRKGALGHTPSKRRFEPPPNL*CGPQTH
Trigger: GTGTGTCTGGGGCCCGCAGCACAGGTTGGGTGGGGG...CTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp TCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGCTTGCCCACTTCTGCTaGCCCTGCCCCAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: SGSPEREPSATHPPNADLLAHFC*PCPSPH
Trigger: GTGGGGGCTGGGGCAGGGGCAGCAGAAGTGGGCAAG...CAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp CCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCCGCCCTGCTGAGTCCCTCGGATCCCCTGTCCTAAAGTaGAGGCCTGAGGTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PSLARTPLVCARPAESLGSPVLK*RPEVLL
Trigger: CAGCAACACCTCAGGCCTGCACTTTAGGACAGGGGA...TCCGAGGGACTCAGCAGGGCGGGCACAGACCAGTGGAGTCCGGGCTAGAGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp CGCCGGCCTGCGGCGCCCGGAGCTGCTGACTGTGTCAGAGCCCGGCTGCCCAGCTTTGAGACAGTATCTTaGTTTGTCACCCAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RRPAAPGAADCVRARLPSFETVS*FVTQAG
Trigger: TCCAGCTTGGGTGACAAAGCAAGATACTGTCTCAAA...GCTGGGCAGCCGGGCTCTGACACAGTCAGCAGCTCCGGGCGCCGCAGGCCGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp ACCGCGTCCTGCTCCTCAGGCTCATGCCCTGCGGGAACAGAAGCCAAGACCCGGCATCTCGCCCAGCTTTaGTGGACTCTCAGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: TASCSSGSCPAGTEAKTRHLAQL*WTLRGA
Trigger: GGCTCCTCTGAGAGTCCAGCAAAGCTGGGCGAGATG...CCGGGTCTTGGCTTCTGTTCCCGCAGGGCATGAGCCTGAGGAGCAGGACGCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp GCTCCTGCCTGCCTCATGGCCTGCTCCTCTGTCGGGGCCTGTCACCGGGAAACCTGCCGTGCGTCCTGCTaGTGTGACTGCTTTTGTACC +
Preference number: 4 (lower is better)
Translates to: APACLMACSSVGACHRETCRASC*CDCFCT
Trigger: GGTACAAAAGCAGTCACAGCAGCAGGACGCACGGCA...GGTTTCCCGGTGACAGGCCCCGACAGAGGAGCAGGCCATGAGGCAGGCAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp GCGCCTGGCCAGGGCTCCCCTGTGGCTGGCGTGTGGAGACACGTGGGCCCTTCTTATTGCCGTGCGTCCTaGTGCTGTGACTGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: APGQGSPVAGVWRHVGPSYCRAS*CCDCFC
Trigger: ACAAAAGCAGTCACAGCAGCAGGACGCACGGCAATA...AGAAGGGCCCACGTGTCTCCACACGCCAGCCACAGGGGAGCCCTGGCCAGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp GTCTGTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGTGTTTTCTGTCTCCGTaGCTCCGGCTTCCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: VCARPAESLGDPRSRCSWCFLSP*LRLPKE
Trigger: CTCTTTGGGAAGCCGGAGGCACGGAGACAGAAAACA...CCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp AAGCAAGAGGCTGGGAGCTGGCCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCTCCTGCACGATGTCCTaGGGGCTCACTGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: KQEAGSWPSLARTPLVCASCTMS*GLTVSL
Trigger: CAGGGAGACAGTGAGCCCCCAGGACATCGTGCAGGA...GGCACAGACCAGTGGAGTCCGGGCTAGAGAGGGCCAGCTCCCAGCCTCTTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp AAGCAAGAGGCTGGGAGCTGGCCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCCCAGGCTCTTCCGATTaGCTCAGGTGCCCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KQEAGSWPSLARTPLVCAPGSSD*LRCPLL
Trigger: CAGGAGAGGGCACCTGAGCCAATCGGAAGAGCCTGG...GGCACAGACCAGTGGAGTCCGGGCTAGAGAGGGCCAGCTCCCAGCCTCTTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGCCTGGGGCTGATGGCTaGGTGATCCCAGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: WVSRKGALGHTPSKRRFEPGADG*VIPGGP
Trigger: GGGACCCCCTGGGATCACCCAGCCATCAGCCCCAGG...CTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGCCTGTCCCTCACCGGGGTCAGGATCCGGGCACTACGTGTAAGTGGCTTTCCCCCTGTGGCTGGCGTGTaGAGACACGTGGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: CLSLTGVRIRALRVSGFPPVAGV*RHVGPS
Trigger: AGAAGGGCCCACGTGTCTCCACACGCCAGCCACAGG...GGGAAAGCCACTTACACGTAGTGCCCGGATCCTGACCCCGGTGAGGGACAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp GGGCCCCAGACACACAGAACTGACTGCCACCTGCAGGCCGGGTCACCGTACTGTCTCACAGGTGCCCGCTaGTTCTGTGACCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: GPQTHRTDCHLQAGSPYCLTGAR*FCDPSQ
Trigger: CTGGGATGGGTCACAGAACCAGCGGGCACCTGTGAG...ACAGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGTCTGGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp CTATTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGCAGGTGCCCAGGTaGGAGCCCCCTCTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LFLWGSNKTGGRLCSRAGRQVPR*EPPLCP
Trigger: GGGGCACAGAGGGGGCTCCCACCTGGGCACCTGCCT...CCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp AGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCAATCAGGCAGCCGGGCTaGGCCCTGCAGACCCACTGG +
Preference number: 4 (lower is better)
Translates to: RWASLQPCREELSLSYQAIRQPG*ALQTHW
Trigger: CCAGTGGGTCTGCAGGGCCCAGCCCGGCTGCCTGAT...TGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GGGGTCCCCAGGCTCTTCCGATTGGCTCAGGTGCCCTCTCCTGCGGTGGCGGGCTCCTTCGAGTCGTGTTaGAAAGAAGCAGAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GVPRLFRLAQVPSPAVAGSFESC*KEAEAA
Trigger: GGCTGCTTCTGCTTCTTTCCAACACGACTCGAAGGA...GCCCGCCACCGCAGGAGAGGGCACCTGAGCCAATCGGAAGAGCCTGGGGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GGGCCCCAGACACACAGAACTGACTGCCACCTGCAGGCCGGGTCACCGTACTGTCTCGCCCAGCTTTGCTaGACTCTCAGAGGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: GPQTHRTDCHLQAGSPYCLAQLC*TLRGAC
Trigger: GCAGGCTCCTCTGAGAGTCCAGCAAAGCTGGGCGAG...ACAGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGTCTGGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp TCAGTCTCTGAGGGTCAGGCCGCAGTCCTGAGTGTCCCCATCTGCCCCACCCGGGCCTCTCCCTTCCAGTaGAAGGAGCAGAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SVSEGQAAVLSVPICPTRASPFQ*KEQRAA
Trigger: TGCTGCTCTCTGCTCCTTCCACTGGAAGGGAGAGGC...CCGGGTGGGGCAGATGGGGACACTCAGGACTGCGGCCTGACCCTCAGAGACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR TCA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCCACGAATCTCAGCCATaGTGGCGCCCTCGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSHESQP*WRPRLP
Trigger: TGGGAGGCGAGGGCGCCATCATGGCTGAGATTCGTG...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp GGACTTGATGGGCTTTCCACGAATCTCAGCCATGATGGCGCCCTCGCCTCCCAGCACGAATCTCAGCCATaGTGGCGCCCTCGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GLDGLSTNLSHDGALASQHESQP*WRPRLP
Trigger: TGGGAGGCGAGGGCGCCATCATGGCTGAGATTCGTG...CTGGGAGGCGAGGGCGCCATCATGGCTGAGATTCGTGGAAAGCCCATCAAGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421923.5
CDS-3UTR TCA 90 bp ACCACGAGGCTGCCCACCCCAGACAGGTGGGACCCCTTTCCCGCATGCAGACTCCGGAGGCGTTGTAGATaGGGGTCACATAGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: TTRLPTPDRWDPFPACRLRRRCR*GSHRGS
Trigger: GCTACCTCTATGTGACCCTCATCTACAACGCCTCCG...GAGTCTGCATGCGGGAAAGGGGTCCCACCTGTCTGGGGTGGGCAGCCTCGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp CCCTGCGGCCACCACCTAATTTATTGCCGTGCGTCCTGCTGCTGTGACTGCTTTTCTCCACCTCCGGGATaGCCCCGCACCGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PCGHHLIYCRASCCCDCFSPPPG*PRTAPG
Trigger: TCCTGGAGCGGTGCGGGGTCATCCCGGAGGTGGAGA...AAAGCAGTCACAGCAGCAGGACGCACGGCAATAAATTAGGTGGTGGCCGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR TCA 90 bp CTATTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGCCGTGCAGGGGACCTGCTGACAGAGTaGGACACGGGGGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: LFLWGSNKTGGRLCSRAGDLLTE*DTGAAW
Trigger: CCAGGCGGCCCCCGTGTCTCACTCTGTCAGCAGGTC...CCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp GCGGTGTCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGAGCTGACCGAGGTGTaGACGCTGTTCAGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: AVSGSPEREPSATHPPNAELTEV*TLFSAG
Trigger: TCCAGCACTGAACAGCGTTCACACCTCGGTCAGCTC...TGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGACACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp GTCTGTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGGACATTACTCATCTTTaGTGGCAGGAAGCACCTGGC +
Preference number: 4 (lower is better)
Translates to: VCARPAESLGDPRSRCSWDITHL*WQEAPG
Trigger: GCCAGGTGCTTCCTGCCAGCAAAGATGAGTAATGTC...CCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp CCAGCTGGCTTGAGCGTTGAGCATGTCAGTTTCCTGGCACAGTCCTCGGCTGGTGACGCCTCGGGCCAGTaGGGAGGTGAGGAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: PAGLSVEHVSFLAQSSAGDASGQ*GGEEEP
Trigger: TGGCTCTTCCTCACCTCCGCACTGGCCCGAGGCGTC...ACCAGCCGAGGACTGTGCCAGGAAACTGACATGCTCAACGCTCAAGCCAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp TTGATGGGCTTTCCACGAATCTCAGCCATGATGGCGCCCTCGCCTCCCAGGTACGACGCCTCGGGCCAGTaGGGAGGTGAGGAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LMGFPRISAMMAPSPPRYDASGQ*GGEEEP
Trigger: TGGCTCTTCCTCACCTCCGCACTGGCCCGAGGCGTC...GTACCTGGGAGGCGAGGGCGCCATCATGGCTGAGATTCGTGGAAAGCCCATCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421923.5
CDS-3UTR GCA 90 bp GGGCCCCAGACACACAGAACTGACTGCCACCTGCAGGCCGGGTCACCGTACTGTGCCAGCAGCAGCCCTTaGCAGAACGACAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: GPQTHRTDCHLQAGSPYCASSSP*QNDRKM
Trigger: CATCTTCCTGTCGTTCTGGCAAGGGCTGCTGCTGGC...ACAGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGTCTGGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GCGGTGTCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAATTTCCGAGGCCACTTaGACGCCTCCAGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: AVSGSPEREPSATHPPNAISEAT*TPPASC
Trigger: GCAGGAAGCTGGAGGCGTGCAAGTGGCCTCGGAAAT...TGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGACACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp CTATTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGCCGTGCAGGGTCCCTCCCGCTCACATaGGCCCACGCTCCCCCTCGA +
Preference number: 4 (lower is better)
Translates to: LFLWGSNKTGGRLCSRAGSLPLT*AHAPPR
Trigger: TCGAGGGGGAGCGTGGGCGCATGTGAGCGGGAGGGA...CCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCCAGATACGCGGCTCCTaGCTGCCTCATGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSQIRGS*LPHGLL
Trigger: GAGCAGGCCATGAGGCAGGCAGGAGCCGCGTATCTG...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp TCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGAGAGCTTGGCGGGTaGGCTGGGCCCAGATACGCG +
Preference number: 4 (lower is better)
Translates to: SGSPEREPSATHPPNADLRELGG*AGPRYA
Trigger: CGCGTATCTGGGCCCAGCGCACCCGCCAAGCTCTCT...CAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp CCCTGCGGCCACCACCTAATTTATTGCCGTGCGTCCTGCTGCTGTGACTGCTTTGGGGCTCCTGGAGGCTaGGGACAGACGGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PCGHHLIYCRASCCCDCFGAPGG*GQTGKL
Trigger: CAGCTTCCCCGTCTGTCCGCAGCCTCCAGGAGCCCC...AAAGCAGTCACAGCAGCAGGACGCACGGCAATAAATTAGGTGGTGGCCGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp CTCAGGGCTTTCCTTCGAGTCGTGTTGGAAAGAAGCAGAAGCAGCCTCACCCGTGCTCTGGGCCCAGCCTaGTCCTCCTGGGGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: LRAFLRVVLERSRSSLTRALGPA*SSWGSR
Trigger: TCGGCTCCCCCAGGAGGAGCAGGCTGGGCCCAGAGC...ACGGGTGAGGCTGCTTCTGCTTCTTTCCAACACGACTCGAAGGAAAGCCCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp TCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGAGCAAAGCGCCCCTaGACAGTGGCCGGAAGCCCG +
Preference number: 4 (lower is better)
Translates to: SGSPEREPSATHPPNADLRAKRP*TVAGSP
Trigger: CGGGCTTCCGGCCACTGTGCAGGGGCGCTTTGCTCT...CAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp TCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGCAGCCACGGGGGAGGTaGTGGTCAGGTGACCACGTC +
Preference number: 4 (lower is better)
Translates to: SGSPEREPSATHPPNADLQPRGR*WSGDHV
Trigger: GACGTGGTCACCTGACCAGCACCTCCCCCGTGGCTG...CAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp ACCACGAGGCTGCCCACCCCAGACAGGTGGGACCCCTTTCCCGCATGCAGACTCAGAGATCCAGGTCTTTaGGTTTCCAGGGCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: TTRLPTPDRWDPFPACRLRDPGL*VSRAWG
Trigger: TCCCCACGCCCTGGAAACGCAAAGACCTGGATCTCT...GAGTCTGCATGCGGGAAAGGGGTCCCACCTGTCTGGGGTGGGCAGCCTCGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp TGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGCTGGCAGGAAGCACCTaGCCCAGTCCAGGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: WVSRKGALGHTPSKRRFELAGST*PSPGRP
Trigger: AGGCCTCCCTGGACTGGGCCAGGTGCTTCCTGCCAG...CTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGCCTGTCCCTCACCGGGGTCAGGATCCGGGCACTACGTGTAAGTGGCTTTCCCGAGCTGTTCCCCATGTaGTCCATCTGCGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: CLSLTGVRIRALRVSGFPELFPM*SICGPA
Trigger: AGCTGGGCCGCAGATGGACCACATGGGGAACAGCTC...GGGAAAGCCACTTACACGTAGTGCCCGGATCCTGACCCCGGTGAGGGACAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp TCCTCGGCTGGTCTGAGGGGGCATTTGGCGGAAACTGACTTCTCCCCTGTCCTAGAGGCCTGGGCAGCCTaGGTCCCTACAGCACTGGCA +
Preference number: 4 (lower is better)
Translates to: SSAGLRGHLAETDFSPVLEAWAA*VPTALA
Trigger: TGCCAGTGCTGTAGGGACCCAGGCTGCCCAGGCCTC...TAGGACAGGGGAGAAGTCAGTTTCCGCCAAATGCCCCCTCAGACCAGCCGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGGCGTGTGGAGACACGTaGGCCCTTCTCCACGTGCCC +
Preference number: 4 (lower is better)
Translates to: SGSPEREPSATHPPNADLACGDT*ALLHVP
Trigger: GGGCACGTGGAGAAGGGCCCACGTGTCTCCACACGC...CAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp CCCTGCGGCCACCACCTAATTTATTGCCGTGCGTCCTGCTGCTGTGACTGCTTTACAGCCCCACGGTGCTaGCCAGCCTCACAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PCGHHLIYCRASCCCDCFTAPRC*PASQVP
Trigger: GGGCACCTGTGAGGCTGGCCAGCACCGTGGGGCTGT...AAAGCAGTCACAGCAGCAGGACGCACGGCAATAAATTAGGTGGTGGCCGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp ACCGCGTCCTGCTCCTCAGGCTCATGCCCTGCGGGAACAGAAGCCAAGACCCGGCCGTTTTGGAGGAAGTaGAGGCTCCCAGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: TASCSSGSCPAGTEAKTRPFWRK*RLPGER
Trigger: CCTTTCTCCTGGGAGCCTCCACTTCCTCCAAAACGG...CCGGGTCTTGGCTTCTGTTCCCGCAGGGCATGAGCCTGAGGAGCAGGACGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp AAGCAAGAGGCTGGGAGCTGGCCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCGCACAAGGCCCGTTTTaGAGGAAGTGGAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: KQEAGSWPSLARTPLVCAAQGPF*RKWRLP
Trigger: TGGGAGCCTCCACTTCCTCCAAAACGGGCCTTGTGC...GGCACAGACCAGTGGAGTCCGGGCTAGAGAGGGCCAGCTCCCAGCCTCTTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCGGCACAGTCCTCGGCTaGTCTGAGGGGGCATTTGGC +
Preference number: 4 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSGTVLG*SEGAFG
Trigger: GCCAAATGCCCCCTCAGACCAGCCGAGGACTGTGCC...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGCTCCTGCCTGCCTCATaGCCTGCTCCTCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: WVSRKGALGHTPSKRRFELLPAS*PAPLSG
Trigger: CCCCGACAGAGGAGCAGGCCATGAGGCAGGCAGGAG...CTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GGGGTCCCCAGGCTCTTCCGATTGGCTCAGGTGCCCTCTCCTGCGGTGGCGGGCTTCCACCGTTTCTTGTaGATGCTGGGGATTTTCAGC +
Preference number: 4 (lower is better)
Translates to: GVPRLFRLAQVPSPAVAGFHRFL*MLGIFS
Trigger: GCTGAAAATCCCCAGCATCCACAAGAAACGGTGGAA...GCCCGCCACCGCAGGAGAGGGCACCTGAGCCAATCGGAAGAGCCTGGGGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGCCTGTCCCTCACCGGGGTCAGGATCCGGGCACTACGTGTAAGTGGCTTTCCCCAGCTGGGGCTTTCTTaGGCCAAGAACCACACCCCC +
Preference number: 4 (lower is better)
Translates to: CLSLTGVRIRALRVSGFPQLGLS*AKNHTP
Trigger: GGGGGTGTGGTTCTTGGCCCAAGAAAGCCCCAGCTG...GGGAAAGCCACTTACACGTAGTGCCCGGATCCTGACCCCGGTGAGGGACAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp TGTGGAGACACGTGGGCCCTTCTCCACGTGCCCACGAGGGCCGTAGCAGGCTCCCTTTCGTTGCGTAGCTaGTGCTTTCAGCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: CGDTWALLHVPTRAVAGSLSLRS*CFQLGL
Trigger: AAGCCCCAGCTGAAAGCACCAGCTACGCAACGAAAG...GGAGCCTGCTACGGCCCTCGTGGGCACGTGGAGAAGGGCCCACGTGTCTCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp GGGGTTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCCACACCGCCTCACCCTaGCTTCTGTGCTACTTGGCA +
Preference number: 4 (lower is better)
Translates to: GVLGVHVLWAVGFYLPLAHTASP*LLCYLA
Trigger: TGCCAAGTAGCACAGAAGCCAGGGTGAGGCGGTGTG...GGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp GGGCTTTCCACGAATCTCAGCCATGATGGCGCCCTCGCCTCCCAGGTACTGGAAGCCTGTCAGGCAGGTTaGCTGCAGGTCTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GLSTNLSHDGALASQVLEACQAG*LQVSGP
Trigger: AGGCCCAGAGACCTGCAGCCAACCTGCCTGACAGGC...TTCCAGTACCTGGGAGGCGAGGGCGCCATCATGGCTGAGATTCGTGGAAAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421923.5
3UTR CAA 72 bp AGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTaGAGCAACTTGACCCCTATCGGGGTGGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: REPSATHPPNAD*SNLTPIGVAFP
Trigger: GGGGAAGGCCACCCCGATAGGGGTCAAGTTGCTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CAA 72 bp GTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACGTCTaGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: VLSRLGVLGVHV*WAVGFYLPLAC
Trigger: GCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCCAAGACGGGACAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR TCA 90 bp TTGTGGATGCTGGGGATTTTCAGCTGGACCATCTCCCAGAGAAGGATACTGAGGCTGCGGCCAGTTCGCTaGCACCAGGGGGACGCCGGC +
Preference number: 4 (lower is better)
Translates to: LWMLGIFSWTISQRRILRLRPVR*HQGDAG
Trigger: GCCGGCGTCCCCCTGGTGTCAGCGAACTGGCCGCAG...CCTCAGTATCCTTCTCTGGGAGATGGTCCAGCTGAAAATCCCCAGCATCCACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp GCAGCTGGACTTGATGGGCTTTCCACGAATCTCAGCCATGATGGCGCCCTCGCCAGATCTGGTGGCAGGTaGGCACCAGGGCAGTCCACA +
Preference number: 4 (lower is better)
Translates to: AAGLDGLSTNLSHDGALARSGGR*APGQST
Trigger: TGTGGACTGCCCTGGTGCTCACCTGCCACCAGATCT...GGCGAGGGCGCCATCATGGCTGAGATTCGTGGAAAGCCCATCAAGTCCAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421923.5
CDS-3UTR TCA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCCCGCTGTCTGTCTCCTaGACCAGGGAGTCTGACCCA +
Preference number: 4 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSPLSVS*TRESDP
Trigger: TGGGTCAGACTCCCTGGTTCAGGAGACAGACAGCGG...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp CTCAGGGCTTTCCTTCGAGTCGTGTTGGAAAGAAGCAGAAGCAGCCTCACCCGTTCCCGCTGTTCCTGGTaGCCGTGGCCATGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LRAFLRVVLERSRSSLTRSRCSW*PWPWVG
Trigger: CCCCACCCATGGCCACGGTCACCAGGAACAGCGGGA...ACGGGTGAGGCTGCTTCTGCTTCTTTCCAACACGACTCGAAGGAAAGCCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp GCGGCTACTGTTCTTGCGGCCGCGATTTCCGAGGCCACTTGCACGCCTCCAGCTCCTAAAGTGCAGGCCTaGGGTGTTGCTGACATAGGG +
Preference number: 4 (lower is better)
Translates to: AATVLAAAISEATCTPPAPKVQA*GVADIG
Trigger: CCCTATGTCAGCAACACCTCAGGCCTGCACTTTAGG...AGCTGGAGGCGTGCAAGTGGCCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp AAGCAAGAGGCTGGGAGCTGGCCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCAGCTGGCTTGAGCGTTaGGCATGTCAGTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: KQEAGSWPSLARTPLVCASWLER*ACQFPG
Trigger: GCCAGGAAACTGACATGCTCAACGCTCAAGCCAGCT...GGCACAGACCAGTGGAGTCCGGGCTAGAGAGGGCCAGCTCCCAGCCTCTTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp GGGCCCCAGACACACAGAACTGACTGCCACCTGCAGGCCGGGTCACCGTACTGTTTTTTGGGGCTGAGCTaGCCGAGGTGTGAACGCTGT +
Preference number: 4 (lower is better)
Translates to: GPQTHRTDCHLQAGSPYCFLGLS*PRCERC
Trigger: ACAGCGTTCACACCTCGGTCAGCTCAGCCCCAAAAA...ACAGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGTCTGGGGCCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp CTATTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGCCGTGCAGGGTCCGATTGGCTCAGGTaGCCTCTCCTGCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: LFLWGSNKTGGRLCSRAGSDWLR*PLLRWR
Trigger: CCGCCACCGCAGGAGAGGGCACCTGAGCCAATCGGA...CCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp TCCTCGGCTGGTCTGAGGGGGCATTTGGCGGAAACTGACTTCTCCCCTGTCCTAAGGTACTCAGGGCCCTaGCTTCGTGGCCTTGTCCGC +
Preference number: 4 (lower is better)
Translates to: SSAGLRGHLAETDFSPVLRYSGP*LRGLVR
Trigger: GCGGACAAGGCCACGAAGGCAGGGCCCTGAGTACCT...TAGGACAGGGGAGAAGTCAGTTTCCGCCAAATGCCCCCTCAGACCAGCCGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp TCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGCTCTGTGGAGCCGGCTaGCTGGTGTCCAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SGSPEREPSATHPPNADLLCGAG*LVSKSL
Trigger: CAGGGACTTGGACACCAGGCAGCCGGCTCCACAGAG...CAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp CTCAGGGCTTTCCTTCGAGTCGTGTTGGAAAGAAGCAGAAGCAGCCTCACCCGTTCCCTCCCGCTCACATaGGCCCACGCTCCCCCTCGA +
Preference number: 4 (lower is better)
Translates to: LRAFLRVVLERSRSSLTRSLPLT*AHAPPR
Trigger: TCGAGGGGGAGCGTGGGCGCATGTGAGCGGGAGGGA...ACGGGTGAGGCTGCTTCTGCTTCTTTCCAACACGACTCGAAGGAAAGCCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GGGCCCCAGACACACAGAACTGACTGCCACCTGCAGGCCGGGTCACCGTACTGTCCAGGGAAGCCTAGCTaGTCATTCTCATGGCCACGT +
Preference number: 4 (lower is better)
Translates to: GPQTHRTDCHLQAGSPYCPGKPS*SFSWPR
Trigger: ACGTGGCCATGAGAATGACCAGCTAGGCTTCCCTGG...ACAGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGTCTGGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp GGACTTGATGGGCTTTCCACGAATCTCAGCCATGATGGCGCCCTCGCCTCCCAGGAGCTGTTCCCCATGTaGTCCATCTGCGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GLDGLSTNLSHDGALASQELFPM*SICGPA
Trigger: AGCTGGGCCGCAGATGGACCACATGGGGAACAGCTC...CTGGGAGGCGAGGGCGCCATCATGGCTGAGATTCGTGGAAAGCCCATCAAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421923.5
CDS-3UTR CCA 90 bp GGGCTTTCCACGAATCTCAGCCATGATGGCGCCCTCGCCTCCCAGGTACTGGAAAGCGCAGGAACCCGATaGAGTAGGTCATGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: GLSTNLSHDGALASQVLESAGTR*SRSCPG
Trigger: TCCGGGGCATGACCTACTCCATCGGGTTCCTGCGCT...TTCCAGTACCTGGGAGGCGAGGGCGCCATCATGGCTGAGATTCGTGGAAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421923.5
CDS-3UTR CCA 90 bp TCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGTCCAGCTGCCCAGCCTaGGATCCGTCCGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: SGSPEREPSATHPPNADLSSCPA*DPSAVC
Trigger: ACAGACAGCGGACGGATCCCAGGCTGGGCAGCTGGA...CAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGCCTGTGGCTGGCGTGTaGAGACACGTGGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: WVSRKGALGHTPSKRRFEPVAGV*RHVGPS
Trigger: AGAAGGGCCCACGTGTCTCCACACGCCAGCCACAGG...CTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp CTCAGGGCTTTCCTTCGAGTCGTGTTGGAAAGAAGCAGAAGCAGCCTCACCCGTCGCCGCGGGTGGGGCTaGCACAAGGCCCGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: LRAFLRVVLERSRSSLTRRRGWG*HKARFG
Trigger: TCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCG...ACGGGTGAGGCTGCTTCTGCTTCTTTCCAACACGACTCGAAGGAAAGCCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TTGTGGATGCTGGGGATTTTCAGCTGGACCATCTCCCAGAGAAGGATACTGAGGTCCGCTCGCCGCGGGTaGGGCTGGCACAAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: LWMLGIFSWTISQRRILRSARRG*GWHKAR
Trigger: ACGGGCCTTGTGCCAGCCCCACCCGCGGCGAGCGGA...CCTCAGTATCCTTCTCTGGGAGATGGTCCAGCTGAAAATCCCCAGCATCCACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp AGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCAACCCAGGGCCCCACCTaGCACGTGGAGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: RWASLQPCREELSLSYQATQGPT*HVEEEE
Trigger: CTCTTCTTCCTCCACGTGCCAGGTGGGGCCCTGGGT...TGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGCAAGAGGCTGGGAGCTaGCCCTCTCTAGCCCGGACT +
Preference number: 4 (lower is better)
Translates to: WVSRKGALGHTPSKRRFEQEAGS*PSLART
Trigger: AGTCCGGGCTAGAGAGGGCCAGCTCCCAGCCTCTTG...CTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TCCTCGGCTGGTCTGAGGGGGCATTTGGCGGAAACTGACTTCTCCCCTGTCCTACAAGAGGCTGGGAGCTaGCCCTCTCTAGCCCGGACT +
Preference number: 4 (lower is better)
Translates to: SSAGLRGHLAETDFSPVLQEAGS*PSLART
Trigger: AGTCCGGGCTAGAGAGGGCCAGCTCCCAGCCTCTTG...TAGGACAGGGGAGAAGTCAGTTTCCGCCAAATGCCCCCTCAGACCAGCCGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp CTATTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGCCGTGCAGGGGACACGGGGGCCGCCTaGTGGGTCTATTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LFLWGSNKTGGRLCSRAGDTGAA*WVYSCG
Trigger: CCCACAGGAATAGACCCACCAGGCGGCCCCCGTGTC...CCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGTCGGCAGCAGGTCCCTaGGGACCTGCTGACAGAGTG +
Preference number: 4 (lower is better)
Translates to: WVSRKGALGHTPSKRRFESAAGP*GPADRV
Trigger: CACTCTGTCAGCAGGTCCCCAGGGACCTGCTGCCGA...CTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGCCCAGGCGGTGTCTaGGTCTCCAGAAAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: SGSPEREPSATHPPNADLSPGGV*VSRKGA
Trigger: GGCTCCCTTTCTGGAGACCCAGACACCGCCTGGGCT...CAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp CTATTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGCCGTGCAGGGGAGAGAGGGCCTCTGTaGAGCCGGCTGCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: LFLWGSNKTGGRLCSRAGERGPL*SRLPGV
Trigger: GACACCAGGCAGCCGGCTCCACAGAGGCCCTCTCTC...CCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GTCCGCTCGCCGCGGGTGGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGAGGGTTTCTTGTGGATGCTaGGGATTTTCAGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: VRSPRVGLAQGPFWRKWRVSCGC*GFSAGP
Trigger: TGGTCCAGCTGAAAATCCCCAGCATCCACAAGAAAC...CCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGAGCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp CTCAGGGCTTTCCTTCGAGTCGTGTTGGAAAGAAGCAGAAGCAGCCTCACCCGTCCGACGGGTGTGAGTTaGGGGCACAGAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LRAFLRVVLERSRSSLTRPTGVS*GHRAPA
Trigger: GGCTGGGGCTCTGTGCCCCCAACTCACACCCGTCGG...ACGGGTGAGGCTGCTTCTGCTTCTTTCCAACACGACTCGAAGGAAAGCCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCGGTGTCCACGTCTTGTaGGCCGTGGGCTTCTACCTG +
Preference number: 4 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSGVHVL*AVGFYL
Trigger: CAGGTAGAAGCCCACGGCCCACAAGACGTGGACACC...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp GGCCTGCTTACAGAAGCGCAGGAACCCGATGGAGTAGGTCATGCCCCGGAGGCATACTCATCTCCCTGGTaGCGCTCAGCCTGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GLLTEAQEPDGVGHAPEAYSSPW*RSACQA
Trigger: TGCCTGACAGGCTGAGCGCCACCAGGGAGATGAGTA...TGCCTCCGGGGCATGACCTACTCCATCGGGTTCCTGCGCTTCTGTAAGCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421923.5
CDS-3UTR TCA 90 bp TCCTCGGCTGGTCTGAGGGGGCATTTGGCGGAAACTGACTTCTCCCCTGTCCTAAGATCTGGTGGCAGGTaGGCACCAGGGCAGTCCACA +
Preference number: 4 (lower is better)
Translates to: SSAGLRGHLAETDFSPVLRSGGR*APGQST
Trigger: TGTGGACTGCCCTGGTGCTCACCTGCCACCAGATCT...TAGGACAGGGGAGAAGTCAGTTTCCGCCAAATGCCCCCTCAGACCAGCCGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp AGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCACCGCTGTCTGTCTCCTaGACCAGGGAGTCTGACCCA +
Preference number: 4 (lower is better)
Translates to: RWASLQPCREELSLSYQAPLSVS*TRESDP
Trigger: TGGGTCAGACTCCCTGGTTCAGGAGACAGACAGCGG...TGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp TGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGGAAAGGCAGTGGCTGTaGTCGCACAGCCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: WVSRKGALGHTPSKRRFEERQWL*SHSPGS
Trigger: AGAGCCTGGGCTGTGCGATCACAGCCACTGCCTTTC...CTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp CCAGCTGGCTTGAGCGTTGAGCATGTCAGTTTCCTGGCACAGTCCTCGGCTGGTTGGAGTGCAGGGGCGTaGTCACAGTTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PAGLSVEHVSFLAQSSAGWSAGA*SQFTAA
Trigger: GGCTGCAGTGAACTGTGATCACGCCCCTGCACTCCA...ACCAGCCGAGGACTGTGCCAGGAAACTGACATGCTCAACGCTCAAGCCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp TGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGTGCTCCTCAGGCTCATaGCCTGCGGGAACAGAAGCC +
Preference number: 4 (lower is better)
Translates to: WVSRKGALGHTPSKRRFECSSGS*PAGTEA
Trigger: GGCTTCTGTTCCCGCAGGGCATGAGCCTGAGGAGCA...CTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp TTGTGGATGCTGGGGATTTTCAGCTGGACCATCTCCCAGAGAAGGATACTGAGGACGCCTCCAGCTTCCTaGGGGCAGGGCACGCGTCCG +
Preference number: 4 (lower is better)
Translates to: LWMLGIFSWTISQRRILRTPPAS*GQGTRP
Trigger: CGGACGCGTGCCCTGCCCGCAGGAAGCTGGAGGCGT...CCTCAGTATCCTTCTCTGGGAGATGGTCCAGCTGAAAATCCCCAGCATCCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp TGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGCTGGAGCTTCCTGTCTaGTCTCCACGCCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: WVSRKGALGHTPSKRRFELELPV*SPRPVP
Trigger: AGGCACTGGGCGTGGAGAGCAGACAGGAAGCTCCAG...CTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp TGTCTGGGAGCAGAGAGCAAAGCGCCCCTGCACAGTGGCCGGAAGCCCGTGGACTTCAGACCCTTTCGTTaGGTAGCTGGTGCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: CLGAESKAPLHSGRKPVDFRPFR*VAGAFS
Trigger: GCTGAAAGCACCAGCTACGCAACGAAAGGGTCTGAA...GTCCACGGGCTTCCGGCCACTGTGCAGGGGCGCTTTGCTCTCTGCTCCCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp ACCGCGTCCTGCTCCTCAGGCTCATGCCCTGCGGGAACAGAAGCCAAGACCCGGCACCACCTAATTTATTaGCGTGCGTCCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: TASCSSGSCPAGTEAKTRHHLIY*RASCCC
Trigger: ACAGCAGCAGGACGCACGGCAATAAATTAGGTGGTG...CCGGGTCTTGGCTTCTGTTCCCGCAGGGCATGAGCCTGAGGAGCAGGACGCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp AGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCCTGCCCCGTCCCTaGGGCCACCACCTAATTTAT +
Preference number: 4 (lower is better)
Translates to: RWASLQPCREELSLSYQAALPRP*GHHLIY
Trigger: ATAAATTAGGTGGTGGCCGCAGGGACGGGGCAGGGC...TGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp CTCAGGGCTTTCCTTCGAGTCGTGTTGGAAAGAAGCAGAAGCAGCCTCACCCGTCTGGCAGGAAGCACCTaGCCCAGTCCAGGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LRAFLRVVLERSRSSLTRLAGST*PSPGRP
Trigger: AGGCCTCCCTGGACTGGGCCAGGTGCTTCCTGCCAG...ACGGGTGAGGCTGCTTCTGCTTCTTTCCAACACGACTCGAAGGAAAGCCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCGTAACGTTGCTCCTGTaGCACGGTGTAGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSVTLLL*HGVGAQ
Trigger: CTGCGCTCCTACACCGTGCCACAGGAGCAACGTTAC...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp AGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCATCCTGCACGATGTCCTaGGGGCTCACTGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RWASLQPCREELSLSYQASCTMS*GLTVSL
Trigger: CAGGGAGACAGTGAGCCCCCAGGACATCGTGCAGGA...TGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp CCCTGCGGCCACCACCTAATTTATTGCCGTGCGTCCTGCTGCTGTGACTGCTTTCGGGGTGGTGCCCACTaGAGCTTCCTGTCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PCGHHLIYCRASCCCDCFRGGAH*SFLSAL
Trigger: GAGAGCAGACAGGAAGCTCCAGTGGGCACCACCCCG...AAAGCAGTCACAGCAGCAGGACGCACGGCAATAAATTAGGTGGTGGCCGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp ACCTCAGGCAACTTGCTCCGTCTCTCTGGGCTCGGTCGCTGTCCCAGCTGGCTTAGCATGTCAGTTTCCTaGCACAGTCCTCGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: TSGNLLRLSGLGRCPSWLSMSVS*HSPRLV
Trigger: GACCAGCCGAGGACTGTGCCAGGAAACTGACATGCT...AAGCCAGCTGGGACAGCGACCGAGCCCAGAGAGACGGAGCAAGTTGCCTGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGGGCTCCGAGGGCCTCACAGGTGGGCTCTCAGGAGAGGCCCCACCTTTGGCAGGTTTCTTGTGGATGCTaGGGATTTTCAGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: WAPRASQVGSQERPHLWQVSCGC*GFSAGP
Trigger: TGGTCCAGCTGAAAATCCCCAGCATCCACAAGAAAC...CTGCCAAAGGTGGGGCCTCTCCTGAGAGCCCACCTGTGAGGCCCTCGGAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGACGTCTTGTGGGCCGTaGGCTTCTACCTGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SGSPEREPSATHPPNADLTSCGP*ASTCPW
Trigger: CCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGT...CAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp ACCTCAGGCAACTTGCTCCGTCTCTCTGGGCTCGGTCGCTGTCCCAGCTGGCTTGGTTCTGTCCCGTCTTaGGGTTCTTGGTGTCCACGT +
Preference number: 4 (lower is better)
Translates to: TSGNLLRLSGLGRCPSWLGSVPS*GSWCPR
Trigger: ACGTGGACACCAAGAACCCCAAGACGGGACAGAACC...AAGCCAGCTGGGACAGCGACCGAGCCCAGAGAGACGGAGCAAGTTGCCTGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
3UTR CAA 72 bp AACGACAGGAAGATGACGGCTTTGATGGTGAGGAACTaGAGGACGGGCTGGAAGGGCCGCAGGAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: NDRKMTALMVRN*RTGWKGRRSSL
Trigger: CAGGGAGCTCCTGCGGCCCTTCCAGCCCGTCCTCAAGTTCCTCACCATCAAAGCCGTCATCTTCCTGTCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319018.12
CDS-3UTR GCA 90 bp TTGTGGATGCTGGGGATTTTCAGCTGGACCATCTCCCAGAGAAGGATACTGAGGCCCACAGCCCCACGGTaGTGGCCAGCCTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: LWMLGIFSWTISQRRILRPTAPR*WPASQV
Trigger: CACCTGTGAGGCTGGCCAGCACCGTGGGGCTGTGGG...CCTCAGTATCCTTCTCTGGGAGATGGTCCAGCTGAAAATCCCCAGCATCCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp TCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGACACACAGAACTGACTaGCACCTGCAGGCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: SGSPEREPSATHPPNADLTHRTD*HLQAGS
Trigger: TGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGT...CAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp TGCCTGTCCCTCACCGGGGTCAGGATCCGGGCACTACGTGTAAGTGGCTTTCCCCTTGGCCTCCCCAAGTaGTGGAATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: CLSLTGVRIRALRVSGFPLGLPK*WNYRCE
Trigger: CTCACACCTGTAATTCCAGCACTTGGGGAGGCCAAG...GGGAAAGCCACTTACACGTAGTGCCCGGATCCTGACCCCGGTGAGGGACAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp AGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCAGTGATCACAGTTCACTaGAGCCTCGACCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RWASLQPCREELSLSYQAVITVH*SLDLPG
Trigger: GCCTGGGAGGTCGAGGCTGCAGTGAACTGTGATCAC...TGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCTACCTGCCCTTGGCCTaGAGTGCTTTGCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSYLPLA*SALLEK
Trigger: CTTCTCCAGCAAAGCACTGCAGGCCAAGGGCAGGTA...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp CTTGATGGGCTTTCCACGAATCTCAGCCATGATGGCGCCCTCGCCTCCCAGGTAGTAACGTTGCTCCTGTaGCACGGTGTAGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: LDGLSTNLSHDGALASQVVTLLL*HGVGAQ
Trigger: CTGCGCTCCTACACCGTGCCACAGGAGCAACGTTAC...TACCTGGGAGGCGAGGGCGCCATCATGGCTGAGATTCGTGGAAAGCCCATCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421923.5
CDS-3UTR CCA 90 bp CCACGAATCTCAGCCATGATGGCGCCCTCGCCTCCCAGGTACTGGAAACACAGGGGCAGAACTGCAGAGTaGCCTGCTTACAGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: PRISAMMAPSPPRYWKHRGRTAE*PAYRSA
Trigger: TGCGCTTCTGTAAGCAGGCCACTCTGCAGTTCTGCC...CCTGTGTTTCCAGTACCTGGGAGGCGAGGGCGCCATCATGGCTGAGATTCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421923.5
CDS-3UTR CCA 90 bp ACCACGAGGCTGCCCACCCCAGACAGGTGGGACCCCTTTCCCGCATGCAGACTCTATTTGCCAAATGCCTaGAGGATGATGGTGGTGACG +
Preference number: 4 (lower is better)
Translates to: TTRLPTPDRWDPFPACRLYLPNA*RMMVVT
Trigger: CGTCACCACCATCATCCTCCAGGCATTTGGCAAATA...GAGTCTGCATGCGGGAAAGGGGTCCCACCTGTCTGGGGTGGGCAGCCTCGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp GCGGTGTCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCATTGAAGTCCCCGTCGTaGTATTTGCCAAATGCCTGG +
Preference number: 4 (lower is better)
Translates to: AVSGSPEREPSATHPPNALKSPS*YLPNAW
Trigger: CCAGGCATTTGGCAAATACCACGACGGGGACTTCAA...TGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGACACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp AGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCAGCACAAGGCCCGTTTTaGAGGAAGTGGAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: RWASLQPCREELSLSYQAAQGPF*RKWRLP
Trigger: TGGGAGCCTCCACTTCCTCCAAAACGGGCCTTGTGC...TGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGCCTGTCCCTCACCGGGGTCAGGATCCGGGCACTACGTGTAAGTGGCTTTCCCCTGGGGATTTTCAGCTaGACCATCTCCCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: CLSLTGVRIRALRVSGFPLGIFS*TISQRR
Trigger: CCTTCTCTGGGAGATGGTCCAGCTGAAAATCCCCAG...GGGAAAGCCACTTACACGTAGTGCCCGGATCCTGACCCCGGTGAGGGACAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp CCCTGCGGCCACCACCTAATTTATTGCCGTGCGTCCTGCTGCTGTGACTGCTTTGTGTTGAATCTGTGCTaGGGCCACAGCAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: PCGHHLIYCRASCCCDCFVLNLC*GHSSPS
Trigger: GCTCGGGCTGCTGTGGCCCCAGCACAGATTCAACAC...AAAGCAGTCACAGCAGCAGGACGCACGGCAATAAATTAGGTGGTGGCCGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp CTATTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGCCGTGCAGGGGTGTTGAATCTGTGCTaGGGCCACAGCAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: LFLWGSNKTGGRLCSRAGVLNLC*GHSSPS
Trigger: GCTCGGGCTGCTGTGGCCCCAGCACAGATTCAACAC...CCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGGCAATCCACTCGCCTTaGCCTCCCCAAGTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: WVSRKGALGHTPSKRRFEAIHSP*PPQVLE
Trigger: TTCCAGCACTTGGGGAGGCCAAGGCGAGTGGATTGC...CTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp CTATTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGCCGTGCAGGGCAGGTGACCACGTCCTaGGCTCAGTCTCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: LFLWGSNKTGGRLCSRAGQVTTS*AQSLRV
Trigger: GACCCTCAGAGACTGAGCCCAGGACGTGGTCACCTG...CCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp TGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGCCTGCAGTGCTTTGCTaGAGAAGGGACTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: WVSRKGALGHTPSKRRFEPAVLC*RRDSLV
Trigger: GACCAGGGAGTCCCTTCTCCAGCAAAGCACTGCAGG...CTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR TCA 90 bp GGCCTGCTTACAGAAGCGCAGGAACCCGATGGAGTAGGTCATGCCCCGGAGGCAACAAGCAGCTGGACTTaGTGGGCTTTCCACGAATCT +
Preference number: 4 (lower is better)
Translates to: GLLTEAQEPDGVGHAPEATSSWT*WAFHES
Trigger: AGATTCGTGGAAAGCCCATCAAGTCCAGCTGCTTGT...TGCCTCCGGGGCATGACCTACTCCATCGGGTTCCTGCGCTTCTGTAAGCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421923.5
CDS-3UTR TCA 90 bp TGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGCCTAAAGTGCAGGCCTaGGGTGTTGCTGACATAGGG +
Preference number: 4 (lower is better)
Translates to: WVSRKGALGHTPSKRRFEPKVQA*GVADIG
Trigger: CCCTATGTCAGCAACACCTCAGGCCTGCACTTTAGG...CTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp TGCCTGTCCCTCACCGGGGTCAGGATCCGGGCACTACGTGTAAGTGGCTTTCCCGCATTTGGCGGAAACTaGCTTCTCCCCTGTCCTAAA +
Preference number: 4 (lower is better)
Translates to: CLSLTGVRIRALRVSGFPAFGGN*LLPCPK
Trigger: TTTAGGACAGGGGAGAAGTCAGTTTCCGCCAAATGC...GGGAAAGCCACTTACACGTAGTGCCCGGATCCTGACCCCGGTGAGGGACAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR TCA 90 bp CCCTGCGGCCACCACCTAATTTATTGCCGTGCGTCCTGCTGCTGTGACTGCTTTCAAGTCCCTGCTCTGTaGCCTCAGGCAACTTGCTCC +
Preference number: 4 (lower is better)
Translates to: PCGHHLIYCRASCCCDCFQVPAL*PQATCS
Trigger: GGAGCAAGTTGCCTGAGGTCACAGAGCAGGGACTTG...AAAGCAGTCACAGCAGCAGGACGCACGGCAATAAATTAGGTGGTGGCCGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR TCA 90 bp CTATTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGCCGTGCAGGGCAAGTCCCTGCTCTGTaGCCTCAGGCAACTTGCTCC +
Preference number: 4 (lower is better)
Translates to: LFLWGSNKTGGRLCSRAGQVPAL*PQATCS
Trigger: GGAGCAAGTTGCCTGAGGTCACAGAGCAGGGACTTG...CCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp CTATTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGCCGTGCAGGGCAGCCTTGCTTCCTGTaGGTTGGGTGTGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: LFLWGSNKTGGRLCSRAGQPCFL*VGCGGE
Trigger: CTCACCTCCACACCCAACTCACAGGAAGCAAGGCTG...CCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp CCAGCTGGCTTGAGCGTTGAGCATGTCAGTTTCCTGGCACAGTCCTCGGCTGGTTCCCCTGTCCTAAAGTaGAGGCCTGAGGTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PAGLSVEHVSFLAQSSAGSPVLK*RPEVLL
Trigger: CAGCAACACCTCAGGCCTGCACTTTAGGACAGGGGA...ACCAGCCGAGGACTGTGCCAGGAAACTGACATGCTCAACGCTCAAGCCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp TTGTGGATGCTGGGGATTTTCAGCTGGACCATCTCCCAGAGAAGGATACTGAGGGCCTGCCTCATGGCCTaGTCCTCTGTCGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LWMLGIFSWTISQRRILRACLMA*SSVGAC
Trigger: ACAGGCCCCGACAGAGGAGCAGGCCATGAGGCAGGC...CCTCAGTATCCTTCTCTGGGAGATGGTCCAGCTGAAAATCCCCAGCATCCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GCGGTGTCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAACCGTTTCTTGTGGATaGTGGGGATTTTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: AVSGSPEREPSATHPPNATVSCG*WGFSAG
Trigger: TCCAGCTGAAAATCCCCAGCATCCACAAGAAACGGT...TGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGACACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp GCGGCTACTGTTCTTGCGGCCGCGATTTCCGAGGCCACTTGCACGCCTCCAGCTACCGTTTCTTGTGGATaGTGGGGATTTTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: AATVLAAAISEATCTPPATVSCG*WGFSAG
Trigger: TCCAGCTGAAAATCCCCAGCATCCACAAGAAACGGT...AGCTGGAGGCGTGCAAGTGGCCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp CCAGCTGGCTTGAGCGTTGAGCATGTCAGTTTCCTGGCACAGTCCTCGGCTGGTGTGAACGCTGTTCAGTaGTGGACCACGCAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: PAGLSVEHVSFLAQSSAGVNAVQ*WTTQGE
Trigger: TTCACCCTGCGTGGTCCAGCACTGAACAGCGTTCAC...ACCAGCCGAGGACTGTGCCAGGAAACTGACATGCTCAACGCTCAAGCCAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp AGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCAGGCAGAACTGCAGAGTaGCCTGCTTACAGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: RWASLQPCREELSLSYQAGRTAE*PAYRSA
Trigger: TGCGCTTCTGTAAGCAGGCCACTCTGCAGTTCTGCC...TGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp CTCAGGGCTTTCCTTCGAGTCGTGTTGGAAAGAAGCAGAAGCAGCCTCACCCGTCCAGGCTCTTCCGATTaGCTCAGGTGCCCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LRAFLRVVLERSRSSLTRPGSSD*LRCPLL
Trigger: CAGGAGAGGGCACCTGAGCCAATCGGAAGAGCCTGG...ACGGGTGAGGCTGCTTCTGCTTCTTTCCAACACGACTCGAAGGAAAGCCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TCCTCGGCTGGTCTGAGGGGGCATTTGGCGGAAACTGACTTCTCCCCTGTCCTAGGCAGAACTGCAGAGTaGCTTGATGGGCTTTCCACG +
Preference number: 4 (lower is better)
Translates to: SSAGLRGHLAETDFSPVLGRTAE*LDGLST
Trigger: CGTGGAAAGCCCATCAAGCCACTCTGCAGTTCTGCC...TAGGACAGGGGAGAAGTCAGTTTCCGCCAAATGCCCCCTCAGACCAGCCGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319018.12
CDS-3UTR TCA 90 bp GCGGTGTCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCATCAGGAAGCTGTAAATaGCAAAGGCTTCGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: AVSGSPEREPSATHPPNASGSCK*QRLRSS
Trigger: ACTGCTACGAAGCCTTTGTCATTTACAGCTTCCTGA...TGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGACACCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCGCATTTGGCGGAAACTaGCTTCTCCCCTGTCCTAAA +
Preference number: 4 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSAFGGN*LLPCPK
Trigger: TTTAGGACAGGGGAGAAGTCAGTTTCCGCCAAATGC...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp AGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCATGGCACATAGCGCAGTaGGTGTTGAATCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RWASLQPCREELSLSYQAWHIAQ*VLNLCW
Trigger: CCAGCACAGATTCAACACTCACTGCGCTATGTGCCA...TGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp TCCTCGGCTGGTCTGAGGGGGCATTTGGCGGAAACTGACTTCTCCCCTGTCCTATGGCACATAGCGCAGTaGGTGTTGAATCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSAGLRGHLAETDFSPVLWHIAQ*VLNLCW
Trigger: CCAGCACAGATTCAACACTCACTGCGCTATGTGCCA...TAGGACAGGGGAGAAGTCAGTTTCCGCCAAATGCCCCCTCAGACCAGCCGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp CCACGAATCTCAGCCATGATGGCGCCCTCGCCTCCCAGGTACTGGAAACACAGGTGTCTCCAGGATCCCTaGGACATTACTCATCTCCCT +
Preference number: 4 (lower is better)
Translates to: PRISAMMAPSPPRYWKHRCLQDP*DITHLP
Trigger: AGGGAGATGAGTAATGTCTCAGGGATCCTGGAGACA...CCTGTGTTTCCAGTACCTGGGAGGCGAGGGCGCCATCATGGCTGAGATTCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421923.5
CDS-3UTR CCA 90 bp TTGTGGATGCTGGGGATTTTCAGCTGGACCATCTCCCAGAGAAGGATACTGAGGTCCAGCTGCCCAGCCTaGGATCCGTCCGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LWMLGIFSWTISQRRILRSSCPA*DPSAVC
Trigger: ACAGACAGCGGACGGATCCCAGGCTGGGCAGCTGGA...CCTCAGTATCCTTCTCTGGGAGATGGTCCAGCTGAAAATCCCCAGCATCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp CTATTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGCCGTGCAGGGCCGTTTTGGAGGAAGTaGAGGCTCCCAGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LFLWGSNKTGGRLCSRAGPFWRK*RLPGER
Trigger: CCTTTCTCCTGGGAGCCTCCACTTCCTCCAAAACGG...CCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp CTATTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGCCGTGCAGGGAGCATGTCAGTTTCCTaGCACAGTCCTCGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LFLWGSNKTGGRLCSRAGSMSVS*HSPRLV
Trigger: GACCAGCCGAGGACTGTGCCAGGAAACTGACATGCT...CCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp CCAGCTGGCTTGAGCGTTGAGCATGTCAGTTTCCTGGCACAGTCCTCGGCTGGTCTGGGGATTTTCAGCTaGACCATCTCCCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PAGLSVEHVSFLAQSSAGLGIFS*TISQRR
Trigger: CCTTCTCTGGGAGATGGTCCAGCTGAAAATCCCCAG...ACCAGCCGAGGACTGTGCCAGGAAACTGACATGCTCAACGCTCAAGCCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp CTCAGGGCTTTCCTTCGAGTCGTGTTGGAAAGAAGCAGAAGCAGCCTCACCCGTGCAATCCACTCGCCTTaGCCTCCCCAAGTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LRAFLRVVLERSRSSLTRAIHSP*PPQVLE
Trigger: TTCCAGCACTTGGGGAGGCCAAGGCGAGTGGATTGC...ACGGGTGAGGCTGCTTCTGCTTCTTTCCAACACGACTCGAAGGAAAGCCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TCCTCGGCTGGTCTGAGGGGGCATTTGGCGGAAACTGACTTCTCCCCTGTCCTAAACGCTGTTCAGTGCTaGACCACGCAGGGTGAAATC +
Preference number: 4 (lower is better)
Translates to: SSAGLRGHLAETDFSPVLNAVQC*TTQGEI
Trigger: GATTTCACCCTGCGTGGTCCAGCACTGAACAGCGTT...TAGGACAGGGGAGAAGTCAGTTTCCGCCAAATGCCCCCTCAGACCAGCCGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR TCA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCTGTCTCCAGGATCCCTaGGACATTACTCATCTTTGC +
Preference number: 4 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSCLQDP*DITHLC
Trigger: GCAAAGATGAGTAATGTCTCAGGGATCCTGGAGACA...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp CTCAGGGCTTTCCTTCGAGTCGTGTTGGAAAGAAGCAGAAGCAGCCTCACCCGTAGCTGGCTTGAGCGTTaGGCATGTCAGTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LRAFLRVVLERSRSSLTRSWLER*ACQFPG
Trigger: GCCAGGAAACTGACATGCTCAACGCTCAAGCCAGCT...ACGGGTGAGGCTGCTTCTGCTTCTTTCCAACACGACTCGAAGGAAAGCCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp TGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGATTCTCCTTCTTCTCTaGGTACACCTGGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: WVSRKGALGHTPSKRRFEILLLL*VHLAGE
Trigger: TTCCCCTGCCAGGTGTACGCAGAGAAGAAGGAGAAT...CTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCTCAGGAAGCTGTAAATaGCAAAGGCTTCGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSSGSCK*QRLRSS
Trigger: ACTGCTACGAAGCCTTTGTCATTTACAGCTTCCTGA...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp CTATTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGCCGTGCAGGGACAAGCAGCTGGACTTaGTGGGCTTTCCACGAATCT +
Preference number: 4 (lower is better)
Translates to: LFLWGSNKTGGRLCSRAGTSSWT*WAFHES
Trigger: AGATTCGTGGAAAGCCCATCAAGTCCAGCTGCTTGT...CCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp CTATTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGCCGTGCAGGGTTGAAGTCCCCGTCGTaGTATTTGCCAAATGCCTGG +
Preference number: 4 (lower is better)
Translates to: LFLWGSNKTGGRLCSRAGLKSPS*YLPNAW
Trigger: CCAGGCATTTGGCAAATACCACGACGGGGACTTCAA...CCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp CTATTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGCCGTGCAGGGTCCTTCGAGTCGTGTTaGAAAGAAGCAGAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LFLWGSNKTGGRLCSRAGSFESC*KEAEAA
Trigger: GGCTGCTTCTGCTTCTTTCCAACACGACTCGAAGGA...CCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp TCCTCGGCTGGTCTGAGGGGGCATTTGGCGGAAACTGACTTCTCCCCTGTCCTATTCCACCGTTTCTTGTaGATGCTGGGGATTTTCAGC +
Preference number: 4 (lower is better)
Translates to: SSAGLRGHLAETDFSPVLFHRFL*MLGIFS
Trigger: GCTGAAAATCCCCAGCATCCACAAGAAACGGTGGAA...TAGGACAGGGGAGAAGTCAGTTTCCGCCAAATGCCCCCTCAGACCAGCCGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR TCA 90 bp CCCTGCGGCCACCACCTAATTTATTGCCGTGCGTCCTGCTGCTGTGACTGCTTTTGTCTCCAGGATCCCTaGGACATTACTCATCTTTGC +
Preference number: 4 (lower is better)
Translates to: PCGHHLIYCRASCCCDCFCLQDP*DITHLC
Trigger: GCAAAGATGAGTAATGTCTCAGGGATCCTGGAGACA...AAAGCAGTCACAGCAGCAGGACGCACGGCAATAAATTAGGTGGTGGCCGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR GCA 90 bp CTCAGGGCTTTCCTTCGAGTCGTGTTGGAAAGAAGCAGAAGCAGCCTCACCCGTATTCTCCTTCTTCTCTaGGTACACCTGGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: LRAFLRVVLERSRSSLTRILLLL*VHLAGE
Trigger: TTCCCCTGCCAGGTGTACGCAGAGAAGAAGGAGAAT...ACGGGTGAGGCTGCTTCTGCTTCTTTCCAACACGACTCGAAGGAAAGCCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR GCA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCTCCTGCTGCTGTGACTaGTTTTGTACCTTTGCAATA +
Preference number: 4 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSSCCCD*FCTFAI
Trigger: TATTGCAAAGGTACAAAAGCAGTCACAGCAGCAGGA...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp CCCTGCGGCCACCACCTAATTTATTGCCGTGCGTCCTGCTGCTGTGACTGCTTTGTGGGTCTATTCCTGTaGGGATCCAATAAGACAGGT +
Preference number: 4 (lower is better)
Translates to: PCGHHLIYCRASCCCDCFVGLFL*GSNKTG
Trigger: ACCTGTCTTATTGGATCCCCACAGGAATAGACCCAC...AAAGCAGTCACAGCAGCAGGACGCACGGCAATAAATTAGGTGGTGGCCGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CCA 90 bp CTCAGGGCTTTCCTTCGAGTCGTGTTGGAAAGAAGCAGAAGCAGCCTCACCCGTTATTTGCCAAATGCCTaGAGGATGATGGTGGTGACG +
Preference number: 4 (lower is better)
Translates to: LRAFLRVVLERSRSSLTRYLPNA*RMMVVT
Trigger: CGTCACCACCATCATCCTCCAGGCATTTGGCAAATA...ACGGGTGAGGCTGCTTCTGCTTCTTTCCAACACGACTCGAAGGAAAGCCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CCA 90 bp CTCAGGGCTTTCCTTCGAGTCGTGTTGGAAAGAAGCAGAAGCAGCCTCACCCGTGTGGGTCTATTCCTGTaGGGATCCAATAAGACAGGT +
Preference number: 4 (lower is better)
Translates to: LRAFLRVVLERSRSSLTRVGLFL*GSNKTG
Trigger: ACCTGTCTTATTGGATCCCCACAGGAATAGACCCAC...ACGGGTGAGGCTGCTTCTGCTTCTTTCCAACACGACTCGAAGGAAAGCCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
3UTR CAA 72 bp TTAAGAAAAAGACGAGGGACTCTTTGTCACGTGGGTTaGTTTTCTGTCTCCGTGCCTCCGGCTTCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LRKRRGTLCHVG*FSVSVPPASQR
Trigger: TCTTTGGGAAGCCGGAGGCACGGAGACAGAAAACAAACCCACGTGACAAAGAGTCCCTCGTCTTTTTCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CAA 90 bp GCGGTGTCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCACCCCCTCGAGGCAGGTaGAGCCCCGGCCTGGACCGC +
Preference number: 5 (lower is better)
Translates to: AVSGSPEREPSATHPPNAPPRGR*SPGLDR
Trigger: GCGGTCCAGGCCGGGGCTCAACCTGCCTCGAGGGGG...TGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGACACCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp GCGCCTGGCCAGGGCTCCCCTGTGGCTGGCGTGTGGAGACACGTGGGCCCTTCTGGCCAGCAGCAGCCCTaGCCAGAACGACAGGAAGAT +
Preference number: 5 (lower is better)
Translates to: APGQGSPVAGVWRHVGPSGQQQP*PERQED
Trigger: ATCTTCCTGTCGTTCTGGCAAGGGCTGCTGCTGGCC...AGAAGGGCCCACGTGTCTCCACACGCCAGCCACAGGGGAGCCCTGGCCAGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp CCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCCGCCCTGCTGAGTCCCTCGGAGGAGAGGCCCCACCTTaGGCAGGAGTTGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: PSLARTPLVCARPAESLGGEAPP*AGVGGW
Trigger: CCACCCACCAACTCCTGCCAAAGGTGGGGCCTCTCC...TCCGAGGGACTCAGCAGGGCGGGCACAGACCAGTGGAGTCCGGGCTAGAGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp TGGGCTCCGAGGGCCTCACAGGTGGGCTCTCAGGAGAGGCCCCACCTTTGGCAGGGGCGGCTACTGTTCTaGCGGCCGCGATTTCCGAGG +
Preference number: 5 (lower is better)
Translates to: WAPRASQVGSQERPHLWQGRLLF*RPRFPR
Trigger: CCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGCCC...CTGCCAAAGGTGGGGCCTCTCCTGAGAGCCCACCTGTGAGGCCCTCGGAGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp GGGGTTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCGCCGACGGGTGTGAGTaGGGGGCACAGAGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: GVLGVHVLWAVGFYLPLAADGCE*GAQSPS
Trigger: GCTGGGGCTCTGTGCCCCCAACTCACACCCGTCGGC...GGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS GCA 90 bp CTCCTCGTCCCAGGATCCTGTCCACTGCTCAGGCAGCATCCAGGCTaGCTCTGTCGGAACGCCACCTCCCAACCCCGTCCACCTGGCCAC +
Preference number: 5 (lower is better)
Translates to: LLVPGSCPLLRQHPG*LCRNATSQPRPPGH
Trigger: GTGGCCAGGTGGACGGGGTTGGGAGGTGGCGTTCCGACAGAGGCAGCCTGGATGCTGCCTGAGCAGTGGACAGGATCCTGGGACGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468535.5
CDS CCA 90 bp TGGCAGGCACCGAGGTCCTTGTGGAGAAGAAGTGGGTACCTGTCTTaGGCGGGGCCCCTAGCCCAGCCGGACGCCAGGCCTGCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: WQAPRSLWRRSGYLS*AGPLAQPDARPALL
Trigger: CAACAAGGCAGGCCTGGCGTCCGGCTGGGCTAGGGGCCCCGCCCAAGACAGGTACCCACTTCTTCTCCACAAGGACCTCGGTGCCTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468535.5
ENST00000474813.5
CDS-3UTR CAA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCCCTGCCTTCGTGGCCTaGTCCGCTCGCCGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSPAFVA*SARRGW
Trigger: CCACCCGCGGCGAGCGGACAAGGCCACGAAGGCAGG...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS GCA 90 bp TATGCAGGGGTAGGGCAGGGACGTGGCCGTTCTCCCTACCGGCCCTaGTCCTCCTCGTCCCAGGATCCTGTCCACTGCTCAGGCAGCATC +
Preference number: 5 (lower is better)
Translates to: YAGVGQGRGRSPYRP*SSSSQDPVHCSGSI
Trigger: GATGCTGCCTGAGCAGTGGACAGGATCCTGGGACGAGGAGGAGCAGGGCCGGTAGGGAGAACGGCCACGTCCCTGCCCTACCCCTGCATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468535.5
CDS-3UTR CAA 90 bp ACCGCGTCCTGCTCCTCAGGCTCATGCCCTGCGGGAACAGAAGCCAAGACCCGGGGCACAAGGCCCGTTTaGGAGGAAGTGGAGGCTCCC +
Preference number: 5 (lower is better)
Translates to: TASCSSGSCPAGTEAKTRGTRPV*EEVEAP
Trigger: GGGAGCCTCCACTTCCTCCAAAACGGGCCTTGTGCC...CCGGGTCTTGGCTTCTGTTCCCGCAGGGCATGAGCCTGAGGAGCAGGACGCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp AGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCGGGCTGGGCCCTGCAGACCCAGGGCGGCTACTGTTCTaGCGGCCGCGATTTCCGAGG +
Preference number: 5 (lower is better)
Translates to: REELSLSYQAAGLGPADPGRLLF*RPRFPR
Trigger: CCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGCCC...TGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAGATAGGCTGAGCTCCTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp TGTGGAGACACGTGGGCCCTTCTCCACGTGCCCACGAGGGCCGTAGCAGGCTCCTTGATGGTGAGGAACTaGAGGACGGGCTGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: CGDTWALLHVPTRAVAGSLMVRN*RTGWKG
Trigger: GCCCTTCCAGCCCGTCCTCAAGTTCCTCACCATCAA...GGAGCCTGCTACGGCCCTCGTGGGCACGTGGAGAAGGGCCCACGTGTCTCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp TGCCTGTCCCTCACCGGGGTCAGGATCCGGGCACTACGTGTAAGTGGCTTTCCCGGAGAGGCCCCACCTTaGGCAGGAGTTGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: CLSLTGVRIRALRVSGFPGEAPP*AGVGGW
Trigger: CCACCCACCAACTCCTGCCAAAGGTGGGGCCTCTCC...GGGAAAGCCACTTACACGTAGTGCCCGGATCCTGACCCCGGTGAGGGACAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CAA 90 bp TGGGCTCCGAGGGCCTCACAGGTGGGCTCTCAGGAGAGGCCCCACCTTTGGCAGGCAGATTTGAGCAACTaGACCCCTATCGGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: WAPRASQVGSQERPHLWQADLSN*TPIGVA
Trigger: GGCCACCCCGATAGGGGTCAAGTTGCTCAAATCTGC...CTGCCAAAGGTGGGGCCTCTCCTGAGAGCCCACCTGTGAGGCCCTCGGAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp GGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCCTCCAAACGCAGATTaGAGCAACTTGACCCCTATC +
Preference number: 5 (lower is better)
Translates to: GPRRTGRSGWPVLSRLGVPPNAD*SNLTPI
Trigger: GATAGGGGTCAAGTTGCTCAAATCTGCGTTTGGAGG...AACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CAA 90 bp CCCTCTCTAGCCCGGACTCCACTGGTCTGTGCCCGCCCTGCTGAGTCCCTCGGAGGTCTGAGGGGGCATTaGGCGGAAACTGACTTCTCC +
Preference number: 5 (lower is better)
Translates to: PSLARTPLVCARPAESLGGLRGH*AETDFS
Trigger: GGAGAAGTCAGTTTCCGCCAAATGCCCCCTCAGACC...TCCGAGGGACTCAGCAGGGCGGGCACAGACCAGTGGAGTCCGGGCTAGAGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp GCGCCTGGCCAGGGCTCCCCTGTGGCTGGCGTGTGGAGACACGTGGGCCCTTCTGGCTTCCACCGTTTCTaGTGGATGCTGGGGATTTTC +
Preference number: 5 (lower is better)
Translates to: APGQGSPVAGVWRHVGPSGFHRF*WMLGIF
Trigger: GAAAATCCCCAGCATCCACAAGAAACGGTGGAAGCC...AGAAGGGCCCACGTGTCTCCACACGCCAGCCACAGGGGAGCCCTGGCCAGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp TCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGGCCGACGGGTGTGAGTaGGGGGCACAGAGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: SGSPEREPSATHPPNADLADGCE*GAQSPS
Trigger: GCTGGGGCTCTGTGCCCCCAACTCACACCCGTCGGC...CAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp ACCGCGTCCTGCTCCTCAGGCTCATGCCCTGCGGGAACAGAAGCCAAGACCCGGCACAGCAGCCCGAGCTaGTCACTAGCAATGGCAGGG +
Preference number: 5 (lower is better)
Translates to: TASCSSGSCPAGTEAKTRHSSPS*SLAMAG
Trigger: CCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTG...CCGGGTCTTGGCTTCTGTTCCCGCAGGGCATGAGCCTGAGGAGCAGGACGCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp ACCACGAGGCTGCCCACCCCAGACAGGTGGGACCCCTTTCCCGCATGCAGACTCCACAGCAGCCCGAGCTaGTCACTAGCAATGGCAGGG +
Preference number: 5 (lower is better)
Translates to: TTRLPTPDRWDPFPACRLHSSPS*SLAMAG
Trigger: CCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTG...GAGTCTGCATGCGGGAAAGGGGTCCCACCTGTCTGGGGTGGGCAGCCTCGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp GTCTGTGCCCGCCCTGCTGAGTCCCTCGGAGACCCCAGGTCCCGCTGTTCCTGGCCACCACCTAATTTATaGCCGTGCGTCCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: VCARPAESLGDPRSRCSWPPPNL*PCVLLL
Trigger: CAGCAGCAGGACGCACGGCAATAAATTAGGTGGTGG...CCAGGAACAGCGGGACCTGGGGTCTCCGAGGGACTCAGCAGGGCGGGCACAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CAA 90 bp TGTGGAGACACGTGGGCCCTTCTCCACGTGCCCACGAGGGCCGTAGCAGGCTCCAAGAGATCCAGGTCTTaGCGTTTCCAGGGCGTGGGG +
Preference number: 5 (lower is better)
Translates to: CGDTWALLHVPTRAVAGSKRSRS*RFQGVG
Trigger: CCCCACGCCCTGGAAACGCAAAGACCTGGATCTCTT...GGAGCCTGCTACGGCCCTCGTGGGCACGTGGAGAAGGGCCCACGTGTCTCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CAA 90 bp TGGGCTCCGAGGGCCTCACAGGTGGGCTCTCAGGAGAGGCCCCACCTTTGGCAGTTGGCCTGCAGTGCTTaGCTGGAGAAGGGACTCCCT +
Preference number: 5 (lower is better)
Translates to: WAPRASQVGSQERPHLWQLACSA*LEKGLP
Trigger: AGGGAGTCCCTTCTCCAGCAAAGCACTGCAGGCCAA...CTGCCAAAGGTGGGGCCTCTCCTGAGAGCCCACCTGTGAGGCCCTCGGAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS CCA 90 bp CTCATCTTTGCTGGCAGGAAGCACCTGGCCCAGTCCAGGGAGGCCTaGCCTCCAGGGAAGCCTAGCTGGTCATTCTCATGGCCACGTGGC +
Preference number: 5 (lower is better)
Translates to: LIFAGRKHLAQSREA*PPGKPSWSFSWPRG
Trigger: GCCACGTGGCCATGAGAATGACCAGCTAGGCTTCCCTGGAGGCCAGGCCTCCCTGGACTGGGCCAGGTGCTTCCTGCCAGCAAAGATGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319010.9
CDS CCA 90 bp TCCAGGCTGCCTCTGTCGGAACGCCACCTCCCAACCCCGTCCACCTaGCCACTGCCTGAAGATCCTCTGTGTGGTGGACACACAGGTGTC +
Preference number: 5 (lower is better)
Translates to: SRLPLSERHLPTPST*PLPEDPLCGGHTGV
Trigger: GACACCTGTGTGTCCACCACACAGAGGATCTTCAGGCAGTGGCCAGGTGGACGGGGTTGGGAGGTGGCGTTCCGACAGAGGCAGCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468535.5
CDS-3UTR CAA 90 bp GGGGTTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCGGCCAGCAGCAGCCCTaGCCAGAACGACAGGAAGAT +
Preference number: 5 (lower is better)
Translates to: GVLGVHVLWAVGFYLPLAGQQQP*PERQED
Trigger: ATCTTCCTGTCGTTCTGGCAAGGGCTGCTGCTGGCC...GGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CAA 90 bp GCGGCTACTGTTCTTGCGGCCGCGATTTCCGAGGCCACTTGCACGCCTCCAGCTCCCGTCTTGGGGTTCTaGGTGTCCACGTCTTGTGGG +
Preference number: 5 (lower is better)
Translates to: AATVLAAAISEATCTPPAPVLGF*VSTSCG
Trigger: CCCACAAGACGTGGACACCAAGAACCCCAAGACGGG...AGCTGGAGGCGTGCAAGTGGCCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CAA 90 bp AGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCAGGGCACAGGTGGGAGTaGGGAGCAAAGCGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: RWASLQPCREELSLSYQAGHRWE*GAKRRP
Trigger: GGGCCTCCGCTTTGCTCCCAACTCCCACCTGTGCCC...TGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CAA 90 bp GTCCGCTCGCCGCGGGTGGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGAGGGAACTGCAGAGTGGCTaGATGGGCTTTCCACGAATC +
Preference number: 5 (lower is better)
Translates to: VRSPRVGLAQGPFWRKWRELQSG*MGFPRI
Trigger: GATTCGTGGAAAGCCCATCAAGCCACTCTGCAGTTC...CCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGAGCGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319018.12
CDS-3UTR CAA 90 bp GCAGCTGGACTTGATGGGCTTTCCACGAATCTCAGCCATGATGGCGCCCTCGCCAGCCTGTCAGGCAGGTaGGCTGCAGGTCTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: AAGLDGLSTNLSHDGALASLSGR*AAGLWA
Trigger: GGCCCAGAGACCTGCAGCCAACCTGCCTGACAGGCT...GGCGAGGGCGCCATCATGGCTGAGATTCGTGGAAAGCCCATCAAGTCCAGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421923.5
CDS CCA 90 bp CCTTGTGCTGGGTGGCTGCCTGTCTGTTCAGCCAACAGGTCGGGGTaGACCTTGGTCCCCTTGGCCCAGGTGCCCTTAATGCCAAGAGTG +
Preference number: 5 (lower is better)
Translates to: PCAGWLPVCSANRSG*TLVPLAQVPLMPRV
Trigger: CACTCTTGGCATTAAGGGCACCTGGGCCAAGGGGACCAAGGTCCACCCCGACCTGTTGGCTGAACAGACAGGCAGCCACCCAGCACAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468535.5
CDS-3UTR CAA 90 bp ACCACGAGGCTGCCCACCCCAGACAGGTGGGACCCCTTTCCCGCATGCAGACTCTCCCCGTCGTGGTATTaGCCAAATGCCTGGAGGATG +
Preference number: 5 (lower is better)
Translates to: TTRLPTPDRWDPFPACRLSPSWY*PNAWRM
Trigger: CATCCTCCAGGCATTTGGCAAATACCACGACGGGGA...GAGTCTGCATGCGGGAAAGGGGTCCCACCTGTCTGGGGTGGGCAGCCTCGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp AGGGAGGAGCTCAGCCTATCTTATCAGGCAGCCGGGCTGGGCCCTGCAGACCCATTGATGGTGAGGAACTaGAGGACGGGCTGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: REELSLSYQAAGLGPADPLMVRN*RTGWKG
Trigger: GCCCTTCCAGCCCGTCCTCAAGTTCCTCACCATCAA...TGGGTCTGCAGGGCCCAGCCCGGCTGCCTGATAAGATAGGCTGAGCTCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp GGGCCCCAGACACACAGAACTGACTGCCACCTGCAGGCCGGGTCACCGTACTGTGGTCTGAGGGGGCATTaGGCGGAAACTGACTTCTCC +
Preference number: 5 (lower is better)
Translates to: GPQTHRTDCHLQAGSPYCGLRGH*AETDFS
Trigger: GGAGAAGTCAGTTTCCGCCAAATGCCCCCTCAGACC...ACAGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGTCTGGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp GGGCCCCAGACACACAGAACTGACTGCCACCTGCAGGCCGGGTCACCGTACTGTGCTGTCCCAGCTGGCTaGAGCGTTGAGCATGTCAGT +
Preference number: 5 (lower is better)
Translates to: GPQTHRTDCHLQAGSPYCAVPAG*SVEHVS
Trigger: ACTGACATGCTCAACGCTCAAGCCAGCTGGGACAGC...ACAGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGTCTGGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp TTGTGGATGCTGGGGATTTTCAGCTGGACCATCTCCCAGAGAAGGATACTGAGGCCTGCCTTCGTGGCCTaGTCCGCTCGCCGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: LWMLGIFSWTISQRRILRPAFVA*SARRGW
Trigger: CCACCCGCGGCGAGCGGACAAGGCCACGAAGGCAGG...CCTCAGTATCCTTCTCTGGGAGATGGTCCAGCTGAAAATCCCCAGCATCCACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCAGCAATCCACTCGCCTaGGCCTCCCCAAGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSSNPLA*ASPSAG
Trigger: TCCAGCACTTGGGGAGGCCAAGGCGAGTGGATTGCT...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS GCA 90 bp GGCAGGCACCGAGGTCTTGAAGTCCCCGTCGTGGTATTTGCCAAATaGCTGGAGGATGATGGTGGTGACGGCCATGACGGGCTTCACCAG +
Preference number: 5 (lower is better)
Translates to: GRHRGLEVPVVVFAK*LEDDGGDGHDGLHQ
Trigger: CTGGTGAAGCCCGTCATGGCCGTCACCACCATCATCCTCCAGGCATTTGGCAAATACCACGACGGGGACTTCAAGACCTCGGTGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319010.9
CDS CCA 90 bp CCGCTGCGGACATTGAAGTCCCCGTCGTGGTATTTGCCAAATGCCTaGAGGATGATGGTGGTGACGGCCATGACGGGCTTCACCAGGCAG +
Preference number: 5 (lower is better)
Translates to: PLRTLKSPSWYLPNA*RMMVVTAMTGFTRQ
Trigger: CTGCCTGGTGAAGCCCGTCATGGCCGTCACCACCATCATCCTCCAGGCATTTGGCAAATACCACGACGGGGACTTCAATGTCCGCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS CCA 90 bp GGCACCGAGGTCTTGAAGTCCCCGTCGTGGTATTTGCCAAATGCCTaGAGGATGATGGTGGTGACGGCCATGACGGGCTTCACCAGGCAG +
Preference number: 5 (lower is better)
Translates to: GTEVLKSPSWYLPNA*RMMVVTAMTGFTRQ
Trigger: CTGCCTGGTGAAGCCCGTCATGGCCGTCACCACCATCATCCTCCAGGCATTTGGCAAATACCACGACGGGGACTTCAAGACCTCGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319010.9
CDS-3UTR CAA 90 bp ACCGCGTCCTGCTCCTCAGGCTCATGCCCTGCGGGAACAGAAGCCAAGACCCGGAGACATTACTCATCTTaGCTGGCAGGAAGCACCTGG +
Preference number: 5 (lower is better)
Translates to: TASCSSGSCPAGTEAKTRRHYSS*LAGSTW
Trigger: CCAGGTGCTTCCTGCCAGCAAAGATGAGTAATGTCT...CCGGGTCTTGGCTTCTGTTCCCGCAGGGCATGAGCCTGAGGAGCAGGACGCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp TGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGAGCAATCCACTCGCCTaGGCCTCCCCAAGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: WVSRKGALGHTPSKRRFESNPLA*ASPSAG
Trigger: TCCAGCACTTGGGGAGGCCAAGGCGAGTGGATTGCT...CTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp CCAGCTGGCTTGAGCGTTGAGCATGTCAGTTTCCTGGCACAGTCCTCGGCTGGTCTTGGTGTCCACGTCTaGTGGGCCGTGGGCTTCTAC +
Preference number: 5 (lower is better)
Translates to: PAGLSVEHVSFLAQSSAGLGVHV*WAVGFY
Trigger: GTAGAAGCCCACGGCCCACAAGACGTGGACACCAAG...ACCAGCCGAGGACTGTGCCAGGAAACTGACATGCTCAACGCTCAAGCCAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS GCA 90 bp GTAGCCGCTGCGGACATTGAAGTCCCCGTCGTGGTATTTGCCAAATaGCTGGAGGATGATGGTGGTGACGGCCATGACGGGCTTCACCAG +
Preference number: 5 (lower is better)
Translates to: VAAADIEVPVVVFAK*LEDDGGDGHDGLHQ
Trigger: CTGGTGAAGCCCGTCATGGCCGTCACCACCATCATCCTCCAGGCATTTGGCAAATACCACGACGGGGACTTCAATGTCCGCAGCGGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS GCA 90 bp GCAGCTCCCGCCTTACTTGAAGTCCCCGTCGTGGTATTTGCCAAATaGCTGGAGGATGATGGTGGTGACGGCCATGACGGGCTTCACCAG +
Preference number: 5 (lower is better)
Translates to: AAPALLEVPVVVFAK*LEDDGGDGHDGLHQ
Trigger: CTGGTGAAGCCCGTCATGGCCGTCACCACCATCATCCTCCAGGCATTTGGCAAATACCACGACGGGGACTTCAAGTAAGGCGGGAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468535.5
ENST00000474813.5
CDS CCA 90 bp CTCCCGCCTTACTTGAAGTCCCCGTCGTGGTATTTGCCAAATGCCTaGAGGATGATGGTGGTGACGGCCATGACGGGCTTCACCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LPPYLKSPSWYLPNA*RMMVVTAMTGFTRQ
Trigger: CTGCCTGGTGAAGCCCGTCATGGCCGTCACCACCATCATCCTCCAGGCATTTGGCAAATACCACGACGGGGACTTCAAGTAAGGCGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468535.5
ENST00000474813.5
CDS-3UTR CAA 90 bp GGGCCCCAGACACACAGAACTGACTGCCACCTGCAGGCCGGGTCACCGTACTGTAGACATTACTCATCTTaGCTGGCAGGAAGCACCTGG +
Preference number: 5 (lower is better)
Translates to: GPQTHRTDCHLQAGSPYCRHYSS*LAGSTW
Trigger: CCAGGTGCTTCCTGCCAGCAAAGATGAGTAATGTCT...ACAGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGTCTGGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCGCGGATGATGTAACGTaGCTCCTGTGGCACGGTGTA +
Preference number: 5 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSADDVT*LLWHGV
Trigger: TACACCGTGCCACAGGAGCAACGTTACATCATCCGC...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp TCCTCGGCTGGTCTGAGGGGGCATTTGGCGGAAACTGACTTCTCCCCTGTCCTAGCAGATTTGAGCAACTaGACCCCTATCGGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: SSAGLRGHLAETDFSPVLADLSN*TPIGVA
Trigger: GGCCACCCCGATAGGGGTCAAGTTGCTCAAATCTGC...TAGGACAGGGGAGAAGTCAGTTTCCGCCAAATGCCCCCTCAGACCAGCCGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp TGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGACATCTCGCCCAGCTTaGCTGGACTCTCAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: WVSRKGALGHTPSKRRFETSRPA*LDSQRS
Trigger: GCTCCTCTGAGAGTCCAGCAAAGCTGGGCGAGATGT...CTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CAA 90 bp GCGGCTACTGTTCTTGCGGCCGCGATTTCCGAGGCCACTTGCACGCCTCCAGCTTTTCAGACCCTTTCGTaGCGTAGCTGGTGCTTTCAG +
Preference number: 5 (lower is better)
Translates to: AATVLAAAISEATCTPPAFQTLS*RSWCFQ
Trigger: CTGAAAGCACCAGCTACGCAACGAAAGGGTCTGAAA...AGCTGGAGGCGTGCAAGTGGCCTCGGAAATCGCGGCCGCAAGAACAGTAGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CAA 90 bp GTCCGCTCGCCGCGGGTGGGGCTGGCACAAGGCCCGTTTTGGAGGAAGTGGAGGTGGCTTCTGTGCTACTaGGCAGTTCCATTTCATTAT +
Preference number: 5 (lower is better)
Translates to: VRSPRVGLAQGPFWRKWRWLLCY*AVPFHY
Trigger: ATAATGAAATGGAACTGCCAAGTAGCACAGAAGCCA...CCTCCACTTCCTCCAAAACGGGCCTTGTGCCAGCCCCACCCGCGGCGAGCGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CAA 90 bp CTATTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGCCGTGCAGGGCGGTTCTGTCCCGTCTaGGGGTTCTTGGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: LFLWGSNKTGGRLCSRAGRFCPV*GFLVST
Trigger: CGTGGACACCAAGAACCCCAAGACGGGACAGAACCG...CCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CAA 90 bp AGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAGCTCAGCCTATCTTATCAGGCAGCGGATGATGTAACGTaGCTCCTGTGGCACGGTGTA +
Preference number: 5 (lower is better)
Translates to: RWASLQPCREELSLSYQAADDVT*LLWHGV
Trigger: TACACCGTGCCACAGGAGCAACGTTACATCATCCGC...TGCCTGATAAGATAGGCTGAGCTCCTCCCTGCACGGCTGCAAAGACGCCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp GGCTTTCCACGAATCTCAGCCATGATGGCGCCCTCGCCTCCCAGGTACTGGAAAGCGGATGATGTAACGTaGCTCCTGTGGCACGGTGTA +
Preference number: 5 (lower is better)
Translates to: GFPRISAMMAPSPPRYWKADDVT*LLWHGV
Trigger: TACACCGTGCCACAGGAGCAACGTTACATCATCCGC...TTTCCAGTACCTGGGAGGCGAGGGCGCCATCATGGCTGAGATTCGTGGAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421923.5
CDS-3UTR CAA 90 bp ACCTCAGGCAACTTGCTCCGTCTCTCTGGGCTCGGTCGCTGTCCCAGCTGGCTTAGGAAGATGACGGCTTaGATGGTGAGGAACTTGAGG +
Preference number: 5 (lower is better)
Translates to: TSGNLLRLSGLGRCPSWLRKMTA*MVRNLR
Trigger: CCTCAAGTTCCTCACCATCAAAGCCGTCATCTTCCT...AAGCCAGCTGGGACAGCGACCGAGCCCAGAGAGACGGAGCAAGTTGCCTGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCGGCTTCCACCGTTTCTaGTGGATGCTGGGGATTTTC +
Preference number: 5 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSGFHRF*WMLGIF
Trigger: GAAAATCCCCAGCATCCACAAGAAACGGTGGAAGCC...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp TCTGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGCTTGCTTCCTGTGAGTaGGGTGTGGAGGTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: SGSPEREPSATHPPNADLLASCE*GVEVSV
Trigger: CACACTCACCTCCACACCCAACTCACAGGAAGCAAG...CAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp TGGGTCTCCAGAAAGGGAGCCCTCGGCCACACACCCTCCAAACGCAGATTTGAGCTTGCTTCCTGTGAGTaGGGTGTGGAGGTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: WVSRKGALGHTPSKRRFELASCE*GVEVSV
Trigger: CACACTCACCTCCACACCCAACTCACAGGAAGCAAG...CTCAAATCTGCGTTTGGAGGGTGTGTGGCCGAGGGCTCCCTTTCTGGAGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp TGCCTGTCCCTCACCGGGGTCAGGATCCGGGCACTACGTGTAAGTGGCTTTCCCCTTTGTCACGTGGGTTaGTTTTCTGTCTCCGTGCCT +
Preference number: 5 (lower is better)
Translates to: CLSLTGVRIRALRVSGFPLCHVG*FSVSVP
Trigger: AGGCACGGAGACAGAAAACAAACCCACGTGACAAAG...GGGAAAGCCACTTACACGTAGTGCCCGGATCCTGACCCCGGTGAGGGACAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CAA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCTACAAGCAGCTGGACTaGATGGGCTTTCCACGAATC +
Preference number: 5 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSYKQLD*MGFPRI
Trigger: GATTCGTGGAAAGCCCATCAAGTCCAGCTGCTTGTA...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS-3UTR CAA 90 bp GGGCTTTCCACGAATCTCAGCCATGATGGCGCCCTCGCCTCCCAGGTACTGGAATACAAGCAGCTGGACTaGATGGGCTTTCCACGAATC +
Preference number: 5 (lower is better)
Translates to: GLSTNLSHDGALASQVLEYKQLD*MGFPRI
Trigger: GATTCGTGGAAAGCCCATCAAGTCCAGCTGCTTGTA...TTCCAGTACCTGGGAGGCGAGGGCGCCATCATGGCTGAGATTCGTGGAAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421923.5
CDS-3UTR CAA 90 bp TTGTGGATGCTGGGGATTTTCAGCTGGACCATCTCCCAGAGAAGGATACTGAGGGGCACAAGGCCCGTTTaGGAGGAAGTGGAGGCTCCC +
Preference number: 5 (lower is better)
Translates to: LWMLGIFSWTISQRRILRGTRPV*EEVEAP
Trigger: GGGAGCCTCCACTTCCTCCAAAACGGGCCTTGTGCC...CCTCAGTATCCTTCTCTGGGAGATGGTCCAGCTGAAAATCCCCAGCATCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCCCTCCAAACGCAGATTaGAGCAACTTGACCCCTATC +
Preference number: 5 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSPPNAD*SNLTPI
Trigger: GATAGGGGTCAAGTTGCTCAAATCTGCGTTTGGAGG...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS-3UTR CAA 90 bp TGGGGCCACAGCAGCCCGAGCTTGTCACTAGCAATGGCAGGGATGGCACTTTCCAAGACGAGGGACTCTTaGTCACGTGGGTTTGTTTTC +
Preference number: 5 (lower is better)
Translates to: WGHSSPSLSLAMAGMALSKTRDS*SRGFVF
Trigger: GAAAACAAACCCACGTGACAAAGAGTCCCTCGTCTT...GGAAAGTGCCATCCCTGCCATTGCTAGTGACAAGCTCGGGCTGCTGTGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS GCA 90 bp ATGTCGTGTGCACACAGGTGGGGTGCGCTGTGTGTGTGCACATATTaGGTGCATGTGAGTGTACATACATGTGTGGTGGTGTGTGCACGG +
Preference number: 5 (lower is better)
Translates to: MSCAHRWGALCVCTY*VHVSVHTCVVVCAR
Trigger: CCGTGCACACACCACCACACATGTATGTACACTCACATGCACGCAATATGTGCACACACACAGCGCACCCCACCTGTGTGCACACGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468535.5
CDS-3UTR CAA 90 bp CTATTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGCCGTGCAGGGAGGAAGATGACGGCTTaGATGGTGAGGAACTTGAGG +
Preference number: 5 (lower is better)
Translates to: LFLWGSNKTGGRLCSRAGRKMTA*MVRNLR
Trigger: CCTCAAGTTCCTCACCATCAAAGCCGTCATCTTCCT...CCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS TCA 90 bp CCTGAAGATCCTCTGTGTGGTGGACACACAGGTGTCGTTCCCGTGTaGGTGTGTGCACATAGGTGTGTGTGCATGTATGTCGTGTGCACA +
Preference number: 5 (lower is better)
Translates to: PEDPLCGGHTGVVPV*VCAHRCVCMYVVCT
Trigger: TGTGCACACGACATACATGCACACACACCTATGTGCACACACTCACACGGGAACGACACCTGTGTGTCCACCACACAGAGGATCTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468535.5
CDS-3UTR CAA 90 bp TTGTGGATGCTGGGGATTTTCAGCTGGACCATCTCCCAGAGAAGGATACTGAGGTCCCCGTCGTGGTATTaGCCAAATGCCTGGAGGATG +
Preference number: 5 (lower is better)
Translates to: LWMLGIFSWTISQRRILRSPSWY*PNAWRM
Trigger: CATCCTCCAGGCATTTGGCAAATACCACGACGGGGA...CCTCAGTATCCTTCTCTGGGAGATGGTCCAGCTGAAAATCCCCAGCATCCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS CCA 90 bp TGTGTGCACATAGGTGTGTGTGCATGTATGTCGTGTGCACACAGGTaGGGTGCGCTGTGTGTGTGCACATATTGCGTGCATGTGAGTGTA +
Preference number: 5 (lower is better)
Translates to: CVHIGVCACMSCAHR*GALCVCTYCVHVSV
Trigger: TACACTCACATGCACGCAATATGTGCACACACACAGCGCACCCCACCTGTGTGCACACGACATACATGCACACACACCTATGTGCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468535.5
CDS-3UTR CAA 90 bp CTATTCCTGTGGGGATCCAATAAGACAGGTGGGCGTCTTTGCAGCCGTGCAGGGCCCAACTCGAGTTTTTaGAGACAGTATCTTGCTTTG +
Preference number: 5 (lower is better)
Translates to: LFLWGSNKTGGRLCSRAGPNSSF*RQYLAL
Trigger: CAAAGCAAGATACTGTCTCAAAAAACTCGAGTTGGG...CCCTGCACGGCTGCAAAGACGCCCACCTGTCTTATTGGATCCCCACAGGAATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297477.10
CDS GCA 72 bp GCTTGGCGGGTGCGCTGGGCCCAGATACGCGGCTCCTaGCTGCCTCATGGCCTGCTCCTCTGTCGGGGCCCG +
Preference number: 6 (lower is better)
Translates to: AWRVRWAQIRGS*LPHGLLLCRGP
Trigger: CGGGCCCCGACAGAGGAGCAGGCCATGAGGCAGGCAGGAGCCGCGTATCTGGGCCCAGCGCACCCGCCAAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449955.1
CDS CCA 72 bp CCAGGCCCCCGGCCTTGGCAGGCACCGAGGTCCTTGTaGAGAAGAAGTGGGTACCTGTCTTGGGCGGGGCCC +
Preference number: 6 (lower is better)
Translates to: PGPRPWQAPRSL*RRSGYLSWAGP
Trigger: GGGCCCCGCCCAAGACAGGTACCCACTTCTTCTCCACAAGGACCTCGGTGCCTGCCAAGGCCGGGGGCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468535.5
ENST00000474813.5
CDS CCA 72 bp CCGAGGTCCTTGTGGAGAAGAAGTGGGTACCTGTCTTaGGCGGGGCCCCTAGCCCAGCCGGACGCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: PRSLWRRSGYLS*AGPLAQPDARP
Trigger: AGGCCTGGCGTCCGGCTGGGCTAGGGGCCCCGCCCAAGACAGGTACCCACTTCTTCTCCACAAGGACCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468535.5
ENST00000474813.5
CDS CAA 72 bp ACCGAGGTCCTTGTGGAGAAGAAGTGGGTACCTGTCTaGGGCGGGGCCCCTAGCCCAGCCGGACGCCAGGCC +
Preference number: 6 (lower is better)
Translates to: TEVLVEKKWVPV*GGAPSPAGRQA
Trigger: GGCCTGGCGTCCGGCTGGGCTAGGGGCCCCGCCCAAGACAGGTACCCACTTCTTCTCCACAAGGACCTCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468535.5
ENST00000474813.5
CDS CAA 72 bp GCCGTGTCCTGTGAGGGGAGGTCCAGGCCCCCGGCCTaGGCAGGCACCGAGGTCCTTGTGGAGAAGAAGTGG +
Preference number: 6 (lower is better)
Translates to: AVSCEGRSRPPA*AGTEVLVEKKW
Trigger: CCACTTCTTCTCCACAAGGACCTCGGTGCCTGCCAAGGCCGGGGGCCTGGACCTCCCCTCACAGGACACGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468535.5
ENST00000474813.5
CDS GCA 72 bp GTAGGGCAGGGACGTGGCCGTTCTCCCTACCGGCCCTaGTCCTCCTCGTCCCAGGATCCTGTCCACTGCTCA +
Preference number: 6 (lower is better)
Translates to: VGQGRGRSPYRP*SSSSQDPVHCS
Trigger: TGAGCAGTGGACAGGATCCTGGGACGAGGAGGAGCAGGGCCGGTAGGGAGAACGGCCACGTCCCTGCCCTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468535.5
CDS CCA 72 bp GCCTTGGCAGGCACCGAGGTCCTTGTGGAGAAGAAGTaGGTACCTGTCTTGGGCGGGGCCCCTAGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: ALAGTEVLVEKK*VPVLGGAPSPA
Trigger: GGCTGGGCTAGGGGCCCCGCCCAAGACAGGTACCCACTTCTTCTCCACAAGGACCTCGGTGCCTGCCAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468535.5
ENST00000474813.5
CDS CCA 72 bp GGCCCAGGTGCCCTTAATGCCAAGAGTGCTCAAGGCTaGGCGGGGGCTGGGGCCATCACTGCCTGGCCAGAA +
Preference number: 6 (lower is better)
Translates to: GPGALNAKSAQG*AGAGAITAWPE
Trigger: TTCTGGCCAGGCAGTGATGGCCCCAGCCCCCGCCCAGCCTTGAGCACTCTTGGCATTAAGGGCACCTGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468535.5
CDS CAA 90 bp TTGGCAGGCACCGAGGTCCTTGTGGAGAAGAAGTGGGTACCTGTCTaGGGCGGGGCCCCTAGCCCAGCCGGACGCCAGGCCTGCCTTGTT +
Preference number: 6 (lower is better)
Translates to: LAGTEVLVEKKWVPV*GGAPSPAGRQACLV
Trigger: AACAAGGCAGGCCTGGCGTCCGGCTGGGCTAGGGGCCCCGCCCAAGACAGGTACCCACTTCTTCTCCACAAGGACCTCGGTGCCTGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468535.5
ENST00000474813.5
CDS GCA 72 bp CCAGGATCCTGTCCACTGCTCAGGCAGCATCCAGGCTaGCTCTGTCGGAACGCCACCTCCCAACCCCGTCCA +
Preference number: 6 (lower is better)
Translates to: PGSCPLLRQHPG*LCRNATSQPRP
Trigger: TGGACGGGGTTGGGAGGTGGCGTTCCGACAGAGGCAGCCTGGATGCTGCCTGAGCAGTGGACAGGATCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468535.5
CDS CCA 72 bp GCTGGCAGGAAGCACCTGGCCCAGTCCAGGGAGGCCTaGCCTCCAGGGAAGCCTAGCTGGTCATTCTCATGG +
Preference number: 6 (lower is better)
Translates to: AGRKHLAQSREA*PPGKPSWSFSW
Trigger: CCATGAGAATGACCAGCTAGGCTTCCCTGGAGGCCAGGCCTCCCTGGACTGGGCCAGGTGCTTCCTGCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319010.9
CDS CCA 72 bp CAGTCCAGGGAGGCCTGGCCTCCAGGGAAGCCTAGCTaGTCATTCTCATGGCCACGTGGCCCCAACTGGAGG +
Preference number: 6 (lower is better)
Translates to: QSREAWPPGKPS*SFSWPRGPNWR
Trigger: CCTCCAGTTGGGGCCACGTGGCCATGAGAATGACCAGCTAGGCTTCCCTGGAGGCCAGGCCTCCCTGGACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319010.9
CDS CCA 72 bp CTGGGAGCCCGGCTTTGCTGGGGTTCTTGGCAGCCCTaGGTGCCTGTTCCATCTCCCACTAACCTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: LGARLCWGSWQP*VPVPSPTNLLG
Trigger: CCCCAGCAGGTTAGTGGGAGATGGAACAGGCACCCAGGGCTGCCAAGAACCCCAGCAAAGCCGGGCTCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441933.5
CDS GCA 72 bp AATCTGTGCTGCGGGCCCCAGACACACAGAACTGACTaGCACCTGCAGGCCGGGTCACCGTACTGTCCCCTG +
Preference number: 6 (lower is better)
Translates to: NLCCGPQTHRTD*HLQAGSPYCPL
Trigger: CAGGGGACAGTACGGTGACCCGGCCTGCAGGTGGCAGTCAGTTCTGTGTGTCTGGGGCCCGCAGCACAGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421996.1
CDS GCA 72 bp TGGACCTTCGCAGGGGTCCTCCTTGTGCTGGGTGGCTaGCTGTCTGTTCAGCCAACAGGTCGGGGTGGACCT +
Preference number: 6 (lower is better)
Translates to: WTFAGVLLVLGG*LSVQPTGRGGP
Trigger: AGGTCCACCCCGACCTGTTGGCTGAACAGACAGGCAGCCACCCAGCACAAGGAGGACCCCTGCGAAGGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468535.5
CDS CAA 90 bp CCGGCCTTGGCAGGCACCGAGGTCTTGAAGTCCCCGTCGTGGTATTaGCCAAATGCCTGGAGGATGATGGTGGTGACGGCCATGACGGGC +
Preference number: 6 (lower is better)
Translates to: PALAGTEVLKSPSWY*PNAWRMMVVTAMTG
Trigger: GCCCGTCATGGCCGTCACCACCATCATCCTCCAGGCATTTGGCAAATACCACGACGGGGACTTCAAGACCTCGGTGCCTGCCAAGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319010.9
CDS CAA 90 bp GCTGGGTGGCTGCCTGTCTGTTCAGCCAACAGGTCGGGGTGGACCTaGGTCCCCTTGGCCCAGGTGCCCTTAATGCCAAGAGTGCTCAAG +
Preference number: 6 (lower is better)
Translates to: AGWLPVCSANRSGWT*VPLAQVPLMPRVLK
Trigger: CTTGAGCACTCTTGGCATTAAGGGCACCTGGGCCAAGGGGACCAAGGTCCACCCCGACCTGTTGGCTGAACAGACAGGCAGCCACCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468535.5
CDS CAA 72 bp CTGCCTGTCTGTTCAGCCAACAGGTCGGGGTGGACCTaGGTCCCCTTGGCCCAGGTGCCCTTAATGCCAAGA +
Preference number: 6 (lower is better)
Translates to: LPVCSANRSGWT*VPLAQVPLMPR
Trigger: TCTTGGCATTAAGGGCACCTGGGCCAAGGGGACCAAGGTCCACCCCGACCTGTTGGCTGAACAGACAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468535.5
CDS CAA 72 bp GCAGGCACCGAGGTCTTGAAGTCCCCGTCGTGGTATTaGCCAAATGCCTGGAGGATGATGGTGGTGACGGCC +
Preference number: 6 (lower is better)
Translates to: AGTEVLKSPSWY*PNAWRMMVVTA
Trigger: GGCCGTCACCACCATCATCCTCCAGGCATTTGGCAAATACCACGACGGGGACTTCAAGACCTCGGTGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319010.9
CDS CAA 72 bp CCGTGTGTGAGCATCTGTGTGGTGTTGGTGAGCACCTaGGACCTTCGCAGGGGTCCAAGGGGTGAGCTGTGT +
Preference number: 6 (lower is better)
Translates to: PCVSICVVLVST*DLRRGPRGELC
Trigger: ACACAGCTCACCCCTTGGACCCCTGCGAAGGTCCAAGGTGCTCACCAACACCACACAGATGCTCACACACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468535.5
CDS CCA 72 bp TCCCCGCAGCTCCCGCCTTACTTGAAGTCCCCGTCGTaGTATTTGCCAAATGCCTGGAGGATGATGGTGGTG +
Preference number: 6 (lower is better)
Translates to: SPQLPPYLKSPS*YLPNAWRMMVV
Trigger: CACCACCATCATCCTCCAGGCATTTGGCAAATACCACGACGGGGACTTCAAGTAAGGCGGGAGCTGCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468535.5
ENST00000474813.5
CDS CAA 72 bp CAGCTCCCGCCTTACTTGAAGTCCCCGTCGTGGTATTaGCCAAATGCCTGGAGGATGATGGTGGTGACGGCC +
Preference number: 6 (lower is better)
Translates to: QLPPYLKSPSWY*PNAWRMMVVTA
Trigger: GGCCGTCACCACCATCATCCTCCAGGCATTTGGCAAATACCACGACGGGGACTTCAAGTAAGGCGGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468535.5
ENST00000474813.5
CDS CCA 72 bp GTCTTGAAGTCCCCGTCGTGGTATTTGCCAAATGCCTaGAGGATGATGGTGGTGACGGCCATGACGGGCTTC +
Preference number: 6 (lower is better)
Translates to: VLKSPSWYLPNA*RMMVVTAMTGF
Trigger: GAAGCCCGTCATGGCCGTCACCACCATCATCCTCCAGGCATTTGGCAAATACCACGACGGGGACTTCAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319010.9
CDS CCA 72 bp ACATTGAAGTCCCCGTCGTGGTATTTGCCAAATGCCTaGAGGATGATGGTGGTGACGGCCATGACGGGCTTC +
Preference number: 6 (lower is better)
Translates to: TLKSPSWYLPNA*RMMVVTAMTGF
Trigger: GAAGCCCGTCATGGCCGTCACCACCATCATCCTCCAGGCATTTGGCAAATACCACGACGGGGACTTCAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297477.10
ENST00000319018.12
CDS CCA 72 bp TACTTGAAGTCCCCGTCGTGGTATTTGCCAAATGCCTaGAGGATGATGGTGGTGACGGCCATGACGGGCTTC +
Preference number: 6 (lower is better)
Translates to: YLKSPSWYLPNA*RMMVVTAMTGF
Trigger: GAAGCCCGTCATGGCCGTCACCACCATCATCCTCCAGGCATTTGGCAAATACCACGACGGGGACTTCAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468535.5
ENST00000474813.5
CDS CAA 90 bp TATGTCGTGTGCACACAGGTGGGGTGCGCTGTGTGTGTGCACATATaGCGTGCATGTGAGTGTACATACATGTGTGGTGGTGTGTGCACG +
Preference number: 6 (lower is better)
Translates to: YVVCTQVGCAVCVHI*RACECTYMCGGVCT
Trigger: CGTGCACACACCACCACACATGTATGTACACTCACATGCACGCAATATGTGCACACACACAGCGCACCCCACCTGTGTGCACACGACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468535.5