Pregenerated sensors for TMEM183A (Homo sapiens)
Ensembl gene IDs: ENSG00000163444Ensembl transcript IDs: ENST00000367242.4, ENST00000463015.1, ENST00000468449.5, ENST00000488097.2, ENST00000543891.5
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATTTCTGCATGGACGGAAGACCAGGCTTCTGTAGGCACACAGGATaGCAGCAGAAGCAGCACAGTACAGGGCAGAGCAAAGTCGCTAAG | + |
|
Preference number: 1 (lower is better) Translates to: HFCMDGRPGFCRHTG*QQKQHSTGQSKVAK Trigger: CTTAGCGACTTTGCTCTGCCCTGTACTGTGCTGCTTCTGCTGTCATCCTGTGTGCCTACAGAAGCCTGGTCTTCCGTCCATGCAGAAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| 3UTR GCA 90 bp | ATCTTTAGTTCAGGCAACCTGGCAGGGACTGTGCTTCTCCCCTCCTaGCTCAAAGAGGCAACTTTTAATTGTAGAGATCTGCAAAGTGCT | + |
|
Preference number: 1 (lower is better) Translates to: IFSSGNLAGTVLLPS*LKEATFNCRDLQSA Trigger: AGCACTTTGCAGATCTCTACAATTAAAAGTTGCCTCTTTGAGGCAGGAGGGGAGAAGCACAGTCCCTGCCAGGTTGCCTGAACTAAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| 3UTR-3UTR TCA 90 bp | AGACACTCCTGCTCCATGGCATCTTTAGTTCAGGCAACCTGGCAGGGACTGTGCCAGGCTCACTCTGTGTaGACAGTTTTAATACCACCC | + |
|
Preference number: 2 (lower is better) Translates to: RHSCSMASLVQATWQGLCQAHSV*TVLIPP Trigger: GGGTGGTATTAAAACTGTTCACACAGAGTGAGCCTG...GCACAGTCCCTGCCAGGTTGCCTGAACTAAAGATGCCATGGAGCAGGAGTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| 3UTR-3UTR GCA 90 bp | AGCACAGTACAGGGCAGAGCAAAGTCGCTAAGTGCTTATGGTTCAAGAGGCTGGTCAGAATCTTGGCTCTaGATTTACTGGTGTTATAGG | + |
|
Preference number: 2 (lower is better) Translates to: STVQGRAKSLSAYGSRGWSESWL*IYWCYR Trigger: CCTATAACACCAGTAAATGCAGAGCCAAGATTCTGA...CCAGCCTCTTGAACCATAAGCACTTAGCGACTTTGCTCTGCCCTGTACTGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGAAGCAGCACAGTACAGGGCAGAGCAAAGTCGCTAAGTGCTTATGGTTCATACAACAAAAAGACCTaGGTCAGAATCTTGGCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: SRSSTVQGRAKSLSAYGSYNKKT*VRILAL Trigger: CAGAGCCAAGATTCTGACCCAGGTCTTTTTGTTGTA...TGAACCATAAGCACTTAGCGACTTTGCTCTGCCCTGTACTGTGCTGCTTCTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| 3UTR-3UTR GCA 90 bp | AGCAGAAGCAGCACAGTACAGGGCAGAGCAAAGTCGCTAAGTGCTTATGGTTCATATCTATGTACACTCTaGCTACTCCTTTTTACCACC | + |
|
Preference number: 2 (lower is better) Translates to: SRSSTVQGRAKSLSAYGSYLCTL*LLLFTT Trigger: GGTGGTAAAAAGGAGTAGGCAGAGTGTACATAGATA...TGAACCATAAGCACTTAGCGACTTTGCTCTGCCCTGTACTGTGCTGCTTCTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| 3UTR-3UTR GCA 90 bp | GCAAAGTGCTCATTGTCCTTAGGTTGTCTGTTATCACTCAAATGCCCAAATTCTGGACATAAGCATTTCTaGATGGACGGAAGACCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: AKCSLSLGCLLSLKCPNSGHKHF*MDGRPG Trigger: GCCTGGTCTTCCGTCCATGCAGAAATGCTTATGTCC...AGAATTTGGGCATTTGAGTGATAACAGACAACCTAAGGACAATGAGCACTTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| 3UTR-3UTR GCA 90 bp | GCAAAGTGCTCATTGTCCTTAGGTTGTCTGTTATCACTCAAATGCCCAAATTCTAGCAAAGTCGCTAAGTaGTTATGGTTCAAGAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: AKCSLSLGCLLSLKCPNSSKVAK*LWFKRL Trigger: CAGCCTCTTGAACCATAAGCACTTAGCGACTTTGCT...AGAATTTGGGCATTTGAGTGATAACAGACAACCTAAGGACAATGAGCACTTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| 3UTR-3UTR CCA 90 bp | GTTAGCAGCAAAATTAAGCAGATGCTTTCTAGGAATATTCCTAGGGAAGATGGTTATGGTTCAAGAGGCTaGTTTCAACATGCAATGCAT | + |
|
Preference number: 2 (lower is better) Translates to: VSSKIKQMLSRNIPREDGYGSRG*FQHAMH Trigger: ATGCATTGCATGTTGAAACCAGCCTCTTGAACCATA...ACCATCTTCCCTAGGAATATTCCTAGAAAGCATCTGCTTAATTTTGCTGCTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| 3UTR CCA 72 bp | CACTCCTGCTCCATGGCATCTTTAGTTCAGGCAACCTaGCAGGGACTGTGCTTCTCCCCTCCTGCCTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HSCSMASLVQAT*QGLCFSPPASK Trigger: CTTTGAGGCAGGAGGGGAGAAGCACAGTCCCTGCCAGGTTGCCTGAACTAAAGATGCCATGGAGCAGGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| 3UTR GCA 72 bp | TCAGGCAACCTGGCAGGGACTGTGCTTCTCCCCTCCTaGCTCAAAGAGGCAACTTTTAATTGTAGAGATCTG | + |
|
Preference number: 3 (lower is better) Translates to: SGNLAGTVLLPS*LKEATFNCRDL Trigger: CAGATCTCTACAATTAAAAGTTGCCTCTTTGAGGCAGGAGGGGAGAAGCACAGTCCCTGCCAGGTTGCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| 3UTR-3UTR CAA 90 bp | AGACACTCCTGCTCCATGGCATCTTTAGTTCAGGCAACCTGGCAGGGACTGTGCTCTGCAAAGTGCTCATaGTCCTTAGGTTGTCTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: RHSCSMASLVQATWQGLCSAKCS*SLGCLL Trigger: TAACAGACAACCTAAGGACAATGAGCACTTTGCAGA...GCACAGTCCCTGCCAGGTTGCCTGAACTAAAGATGCCATGGAGCAGGAGTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| 3UTR GCA 72 bp | AAGCAGCACAGTACAGGGCAGAGCAAAGTCGCTAAGTaGTTATGGTTCAAGAGGCTGGTTTCAACATGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: KQHSTGQSKVAK*LWFKRLVSTCN Trigger: ATTGCATGTTGAAACCAGCCTCTTGAACCATAAGCACTTAGCGACTTTGCTCTGCCCTGTACTGTGCTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| 3UTR CCA 72 bp | TCATCTAAACAACAGGAGGACATAAGCATTTCTGCATaGACGGAAGACCAGGCTTCTGTAGGCACACAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: SSKQQEDISISA*TEDQASVGTQD Trigger: ATCCTGTGTGCCTACAGAAGCCTGGTCTTCCGTCCATGCAGAAATGCTTATGTCCTCCTGTTGTTTAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| 3UTR-3UTR CAA 90 bp | GCAAAGTGCTCATTGTCCTTAGGTTGTCTGTTATCACTCAAATGCCCAAATTCTGCTCACTGGTTAATTTaGGATGGTGGAGGGTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: AKCSLSLGCLLSLKCPNSAHWLI*DGGGWE Trigger: CTCCCACCCTCCACCATCCAAAATTAACCAGTGAGC...AGAATTTGGGCATTTGAGTGATAACAGACAACCTAAGGACAATGAGCACTTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| 3UTR CCA 72 bp | CACAGTACAGGGCAGAGCAAAGTCGCTAAGTGCTTATaGTTCAAGAGGCTGGTTTCAACATGCAATGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: HSTGQSKVAKCL*FKRLVSTCNAF Trigger: AAATGCATTGCATGTTGAAACCAGCCTCTTGAACCATAAGCACTTAGCGACTTTGCTCTGCCCTGTACTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| 3UTR CCA 72 bp | AGAGCAAAGTCGCTAAGTGCTTATGGTTCAAGAGGCTaGTTTCAACATGCAATGCATTTTGTTAATGACGTT | + |
|
Preference number: 3 (lower is better) Translates to: RAKSLSAYGSRG*FQHAMHFVNDV Trigger: AACGTCATTAACAAAATGCATTGCATGTTGAAACCAGCCTCTTGAACCATAAGCACTTAGCGACTTTGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| 3UTR-3UTR CAA 90 bp | GTTAGCAGCAAAATTAAGCAGATGCTTTCTAGGAATATTCCTAGGGAAGATGGTTGTGAATTTAGCAGTTaGCCTCACAAGATTTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: VSSKIKQMLSRNIPREDGCEFSS*PHKIFT Trigger: AGTGAAAATCTTGTGAGGCAAACTGCTAAATTCACA...ACCATCTTCCCTAGGAATATTCCTAGAAAGCATCTGCTTAATTTTGCTGCTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR GCA 90 bp | AGCACAGTACAGGGCAGAGCAAAGTCGCTAAGTGCTTATGGTTCAAGAGGCTGGACCTGGCAGGGACTGTaGTTCTCCCCTCCTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: STVQGRAKSLSAYGSRGWTWQGL*FSPPAS Trigger: TGAGGCAGGAGGGGAGAAGCACAGTCCCTGCCAGGT...CCAGCCTCTTGAACCATAAGCACTTAGCGACTTTGCTCTGCCCTGTACTGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR CCA 90 bp | AGACACTCCTGCTCCATGGCATCTTTAGTTCAGGCAACCTGGCAGGGACTGTGCGTTAATTTTGGATGGTaGAGGGTGGGAGGAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: RHSCSMASLVQATWQGLCVNFGW*RVGGET Trigger: TGTCTCTCCTCCCACCCTCCACCATCCAAAATTAAC...GCACAGTCCCTGCCAGGTTGCCTGAACTAAAGATGCCATGGAGCAGGAGTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR CCA 90 bp | AGCACAGTACAGGGCAGAGCAAAGTCGCTAAGTGCTTATGGTTCAAGAGGCTGGTTAGTTCAGGCAACCTaGCAGGGACTGTGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: STVQGRAKSLSAYGSRGWLVQAT*QGLCFS Trigger: GGAGAAGCACAGTCCCTGCCAGGTTGCCTGAACTAA...CCAGCCTCTTGAACCATAAGCACTTAGCGACTTTGCTCTGCCCTGTACTGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR GCA 90 bp | AGCAGAAGCAGCACAGTACAGGGCAGAGCAAAGTCGCTAAGTGCTTATGGTTCACTAAGCGGGGAACAATaGACCAAGACACTCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRSSTVQGRAKSLSAYGSLSGEQ*TKTLLL Trigger: GAGCAGGAGTGTCTTGGTGCATTGTTCCCCGCTTAG...TGAACCATAAGCACTTAGCGACTTTGCTCTGCCCTGTACTGTGCTGCTTCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR GCA 90 bp | AGCACAGTACAGGGCAGAGCAAAGTCGCTAAGTGCTTATGGTTCAAGAGGCTGGGCACCAAGACACTCCTaGTCCATGGCATCTTTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: STVQGRAKSLSAYGSRGWAPRHS*SMASLV Trigger: AACTAAAGATGCCATGGAGCAGGAGTGTCTTGGTGC...CCAGCCTCTTGAACCATAAGCACTTAGCGACTTTGCTCTGCCCTGTACTGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR CCA 90 bp | AGACACTCCTGCTCCATGGCATCTTTAGTTCAGGCAACCTGGCAGGGACTGTGCTACAACAAAAAGACCTaGGTCAGAATCTTGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RHSCSMASLVQATWQGLCYNKKT*VRILAL Trigger: CAGAGCCAAGATTCTGACCCAGGTCTTTTTGTTGTA...GCACAGTCCCTGCCAGGTTGCCTGAACTAAAGATGCCATGGAGCAGGAGTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR CCA 90 bp | AGACACTCCTGCTCCATGGCATCTTTAGTTCAGGCAACCTGGCAGGGACTGTGCTTAATGCCCACCTCCTaGCAATATCCAGGTAATATC | + |
|
Preference number: 4 (lower is better) Translates to: RHSCSMASLVQATWQGLCLMPTS*QYPGNI Trigger: GATATTACCTGGATATTGCCAGGAGGTGGGCATTAA...GCACAGTCCCTGCCAGGTTGCCTGAACTAAAGATGCCATGGAGCAGGAGTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR GCA 90 bp | AGCACAGTACAGGGCAGAGCAAAGTCGCTAAGTGCTTATGGTTCAAGAGGCTGGAGCAAAGTCGCTAAGTaGTTATGGTTCAAGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: STVQGRAKSLSAYGSRGWSKVAK*LWFKRL Trigger: CAGCCTCTTGAACCATAAGCACTTAGCGACTTTGCT...CCAGCCTCTTGAACCATAAGCACTTAGCGACTTTGCTCTGCCCTGTACTGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR TCA 90 bp | CTCTGCCTACTCCTTTTTACCACCATCTACCACAAGAAAAATGAGACTCATCTTCAGGCTCACTCTGTGTaGACAGTTTTAATACCACCC | + |
|
Preference number: 4 (lower is better) Translates to: LCLLLFTTIYHKKNETHLQAHSV*TVLIPP Trigger: GGGTGGTATTAAAACTGTTCACACAGAGTGAGCCTG...AAGATGAGTCTCATTTTTCTTGTGGTAGATGGTGGTAAAAAGGAGTAGGCAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR TCA 90 bp | ACTTATGGTACAACAAAAAGACCTGGGTCAGAATCTTGGCTCTGCATTTACTGGAATTCTGTTTTTGACTaGCCCAGGCTCACTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TYGTTKRPGSESWLCIYWNSVFD*PRLTLC Trigger: ACACAGAGTGAGCCTGGGTCAGTCAAAAACAGAATT...CCAGTAAATGCAGAGCCAAGATTCTGACCCAGGTCTTTTTGTTGTACCATAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR TCA 90 bp | CTCTGCCTACTCCTTTTTACCACCATCTACCACAAGAAAAATGAGACTCATCTTCCCAAATTCTGTTTTTaGCTGACCCAGGCTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCLLLFTTIYHKKNETHLPKFCF*LTQAHS Trigger: AGAGTGAGCCTGGGTCAGTCAAAAACAGAATTTGGG...AAGATGAGTCTCATTTTTCTTGTGGTAGATGGTGGTAAAAAGGAGTAGGCAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR GCA 90 bp | AGCAGAAGCAGCACAGTACAGGGCAGAGCAAAGTCGCTAAGTGCTTATGGTTCAGTGAATTTAGCAGTTTaGCTCACAAGATTTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SRSSTVQGRAKSLSAYGSVNLAV*LTRFSL Trigger: AAGTGAAAATCTTGTGAGGCAAACTGCTAAATTCAC...TGAACCATAAGCACTTAGCGACTTTGCTCTGCCCTGTACTGTGCTGCTTCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR GCA 90 bp | GTTAGCAGCAAAATTAAGCAGATGCTTTCTAGGAATATTCCTAGGGAAGATGGTGTGCTTCTCCCCTCCTaGCTCAAAGAGGCAACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSSKIKQMLSRNIPREDGVLLPS*LKEATF Trigger: AAAAGTTGCCTCTTTGAGGCAGGAGGGGAGAAGCAC...ACCATCTTCCCTAGGAATATTCCTAGAAAGCATCTGCTTAATTTTGCTGCTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR CCA 90 bp | GCAAAGTGCTCATTGTCCTTAGGTTGTCTGTTATCACTCAAATGCCCAAATTCTATAAGCATTTCTGCATaGACGGAAGACCAGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AKCSLSLGCLLSLKCPNSISISA*TEDQAS Trigger: AGAAGCCTGGTCTTCCGTCCATGCAGAAATGCTTAT...AGAATTTGGGCATTTGAGTGATAACAGACAACCTAAGGACAATGAGCACTTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR GCA 90 bp | ACTTATGGTACAACAAAAAGACCTGGGTCAGAATCTTGGCTCTGCATTTACTGGTATCTATGTACACTCTaGCTACTCCTTTTTACCACC | + |
|
Preference number: 4 (lower is better) Translates to: TYGTTKRPGSESWLCIYWYLCTL*LLLFTT Trigger: GGTGGTAAAAAGGAGTAGGCAGAGTGTACATAGATA...CCAGTAAATGCAGAGCCAAGATTCTGACCCAGGTCTTTTTGTTGTACCATAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR CCA 90 bp | GTTAGCAGCAAAATTAAGCAGATGCTTTCTAGGAATATTCCTAGGGAAGATGGTGTCGCTAAGTGCTTATaGTTCAAGAGGCTGGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSSKIKQMLSRNIPREDGVAKCL*FKRLVS Trigger: TGAAACCAGCCTCTTGAACCATAAGCACTTAGCGAC...ACCATCTTCCCTAGGAATATTCCTAGAAAGCATCTGCTTAATTTTGCTGCTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR GCA 90 bp | GCAAAGTGCTCATTGTCCTTAGGTTGTCTGTTATCACTCAAATGCCCAAATTCTTCAGAATCTTGGCTCTaGATTTACTGGTGTTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: AKCSLSLGCLLSLKCPNSSESWL*IYWCYR Trigger: CCTATAACACCAGTAAATGCAGAGCCAAGATTCTGA...AGAATTTGGGCATTTGAGTGATAACAGACAACCTAAGGACAATGAGCACTTTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR CCA 90 bp | GTTAGCAGCAAAATTAAGCAGATGCTTTCTAGGAATATTCCTAGGGAAGATGGTTGGCTCTGCATTTACTaGTGTTATAGGTACAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSSKIKQMLSRNIPREDGWLCIY*CYRYSH Trigger: GTGACTGTACCTATAACACCAGTAAATGCAGAGCCA...ACCATCTTCCCTAGGAATATTCCTAGAAAGCATCTGCTTAATTTTGCTGCTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR CCA 90 bp | GCAAAGTGCTCATTGTCCTTAGGTTGTCTGTTATCACTCAAATGCCCAAATTCTTATGGTTCAAGAGGCTaGTTTCAACATGCAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AKCSLSLGCLLSLKCPNSYGSRG*FQHAMH Trigger: ATGCATTGCATGTTGAAACCAGCCTCTTGAACCATA...AGAATTTGGGCATTTGAGTGATAACAGACAACCTAAGGACAATGAGCACTTTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR GCA 90 bp | CTCTGCCTACTCCTTTTTACCACCATCTACCACAAGAAAAATGAGACTCATCTTTTAATTGTAGAGATCTaGAAAGTGCTCATTGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCLLLFTTIYHKKNETHLLIVEI*KVLIVL Trigger: AAGGACAATGAGCACTTTGCAGATCTCTACAATTAA...AAGATGAGTCTCATTTTTCTTGTGGTAGATGGTGGTAAAAAGGAGTAGGCAGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS GCA 90 bp | GGCCTTCTCTCGTCAGCGTCTTCCCCGCCAACACCTCCTCCTCGCTaGAGGCCCCCGGACCGAGCCGCCCTCCAGCCGCGGGCACGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: GLLSSASSPPTPPPR*RPPDRAALQPRARE Trigger: CTCGCGTGCCCGCGGCTGGAGGGCGGCTCGGTCCGGGGGCCTGCAGCGAGGAGGAGGTGTTGGCGGGGAAGACGCTGACGAGAGAAGGCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000543891.5 |
||
| CDS GCA 90 bp | AAGGGGTGGGTCGTCCGCCGTGCCAGCTGTCCTGCCCTTCAGACATaGCCTGTACGTCCTGCTGTTCCATCAAAATTAATGGGCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KGWVVRRASCPALQT*PVRPAVPSKLMGLA Trigger: AGCCAAGCCCATTAATTTTGATGGAACAGCAGGACGTACAGGGCATGTCTGAAGGGCAGGACAGCTGGCACGGCGGACGACCCACCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000468449.5 ENST00000488097.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGAAGCAGCACAGTACAGGGCAGAGCAAAGTCGCTAAGTGCTTATGGTTCAGCTCACTGGTTAATTTaGGATGGTGGAGGGTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SRSSTVQGRAKSLSAYGSAHWLI*DGGGWE Trigger: CTCCCACCCTCCACCATCCAAAATTAACCAGTGAGC...TGAACCATAAGCACTTAGCGACTTTGCTCTGCCCTGTACTGTGCTGCTTCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR CAA 90 bp | CTCTGCCTACTCCTTTTTACCACCATCTACCACAAGAAAAATGAGACTCATCTTACCTGGGTCAGAATCTaGGCTCTGCATTTACTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LCLLLFTTIYHKKNETHLTWVRI*ALHLLV Trigger: CACCAGTAAATGCAGAGCCAAGATTCTGACCCAGGT...AAGATGAGTCTCATTTTTCTTGTGGTAGATGGTGGTAAAAAGGAGTAGGCAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR CAA 90 bp | CTCTGCCTACTCCTTTTTACCACCATCTACCACAAGAAAAATGAGACTCATCTTGCCCAAATTCTGTTTTaGACTGACCCAGGCTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: LCLLLFTTIYHKKNETHLAQILF*TDPGSL Trigger: GAGTGAGCCTGGGTCAGTCAAAAACAGAATTTGGGC...AAGATGAGTCTCATTTTTCTTGTGGTAGATGGTGGTAAAAAGGAGTAGGCAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR CAA 90 bp | CTCTGCCTACTCCTTTTTACCACCATCTACCACAAGAAAAATGAGACTCATCTTCTCATTGTCCTTAGGTaGTCTGTTATCACTCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: LCLLLFTTIYHKKNETHLLIVLR*SVITQM Trigger: CATTTGAGTGATAACAGACAACCTAAGGACAATGAG...AAGATGAGTCTCATTTTTCTTGTGGTAGATGGTGGTAAAAAGGAGTAGGCAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR CAA 90 bp | GTTAGCAGCAAAATTAAGCAGATGCTTTCTAGGAATATTCCTAGGGAAGATGGTTCTGCAAAGTGCTCATaGTCCTTAGGTTGTCTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: VSSKIKQMLSRNIPREDGSAKCS*SLGCLL Trigger: TAACAGACAACCTAAGGACAATGAGCACTTTGCAGA...ACCATCTTCCCTAGGAATATTCCTAGAAAGCATCTGCTTAATTTTGCTGCTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS-3UTR CAA 90 bp | GCAAAGTGCTCATTGTCCTTAGGTTGTCTGTTATCACTCAAATGCCCAAATTCTTGTGAATTTAGCAGTTaGCCTCACAAGATTTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: AKCSLSLGCLLSLKCPNSCEFSS*PHKIFT Trigger: AGTGAAAATCTTGTGAGGCAAACTGCTAAATTCACA...AGAATTTGGGCATTTGAGTGATAACAGACAACCTAAGGACAATGAGCACTTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367242.4 |
||
| CDS GCA 72 bp | CAGCTGTCCTGCCCTTCAGACATGCCCTGTACGTCCTaGTGTTCCATCAAAATTAATGGGCTTGGCTTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: QLSCPSDMPCTS*CSIKINGLGFK Trigger: CTTAAAGCCAAGCCCATTAATTTTGATGGAACAGCAGGACGTACAGGGCATGTCTGAAGGGCAGGACAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000468449.5 ENST00000488097.2 |
||
| CDS CAA 90 bp | AGAAAAGTCAAAGACTCTTCTATCTGGGACTTGAAGCAAGACGTTTaGCTGAAAGTGGATACTGGAGTGGGGAAGGAGGCAACCACACGG | + |
|
Preference number: 6 (lower is better) Translates to: RKVKDSSIWDLKQDV*LKVDTGVGKEATTR Trigger: CCGTGTGGTTGCCTCCTTCCCCACTCCAGTATCCACTTTCAGCAAAACGTCTTGCTTCAAGTCCCAGATAGAAGAGTCTTTGACTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463015.1 |
||
| CDS CAA 72 bp | AAAGACTCTTCTATCTGGGACTTGAAGCAAGACGTTTaGCTGAAAGTGGATACTGGAGTGGGGAAGGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: KDSSIWDLKQDV*LKVDTGVGKEA Trigger: TGCCTCCTTCCCCACTCCAGTATCCACTTTCAGCAAAACGTCTTGCTTCAAGTCCCAGATAGAAGAGTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463015.1 |
||
| CDS GCA 72 bp | GCATCAAAAACTAGCCCTTTTACTAATCATATAATTTaGCTACTCCTCACCACTACAACTATACATAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ASKTSPFTNHII*LLLTTTTIHKA Trigger: AGCCTTATGTATAGTTGTAGTGGTGAGGAGTAGGCAAATTATATGATTAGTAAAAGGGCTAGTTTTTGATGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000463015.1 |
||