RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM18 (Homo sapiens)

Ensembl gene IDs: ENSG00000151353

Ensembl transcript IDs: ENST00000281017.8, ENST00000355654.6, ENST00000405941.3, ENST00000418447.1, ENST00000432667.5, ENST00000461640.1, ENST00000477202.1, ENST00000497508.1

Found 504 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCCACTCGGAACAAGCTGCCACCAACGCATGGCACCCACAGCCTaGGTGGGCCTCGCCGCCCCATCCTGCCTTCCCTGTGCAGCAACC +
Preference number: 1 (lower is better)
Translates to: APLGTSCHQRMAPTA*VGLAAPSCLPCAAT
Trigger: GGTTGCTGCACAGGGAAGGCAGGATGGGGCGGCGAGGCCCACGCAGGCTGTGGGTGCCATGCGTTGGTGGCAGCTTGTTCCGAGTGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR GCA 90 bp GCTCTTCTCTGCCCTGGCTCGCTCCCTTCCTGCCTCCGAGAACTCTaGATGTGGAGCCCAGCCCCGTCCTCCCCAGGACCGACTTGCTGG +
Preference number: 1 (lower is better)
Translates to: ALLCPGSLPSCLREL*MWSPAPSSPGPTCW
Trigger: CCAGCAAGTCGGTCCTGGGGAGGACGGGGCTGGGCTCCACATGCAGAGTTCTCGGAGGCAGGAAGGGAGCGAGCCAGGGCAGAGAAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR GCA 90 bp CACCATCCTGGGACTGGGCAGCGCCACCCCCTGGGTGCTCTTCTCTaGCCTGGCTCGCTCCCTTCCTGCCTCCGAGAACTCTGCATGTGG +
Preference number: 1 (lower is better)
Translates to: HHPGTGQRHPLGALL*PGSLPSCLRELCMW
Trigger: CCACATGCAGAGTTCTCGGAGGCAGGAAGGGAGCGAGCCAGGGCAGAGAAGAGCACCCAGGGGGTGGCGCTGCCCAGTCCCAGGATGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR GCA 90 bp CAACGCATGGCACCCACAGCCTGCGTGGGCCTCGCCGCCCCATCCTaGCTTCCCTGTGCAGCAACCAGGGCTTGGAGACATCTTCGCACC +
Preference number: 1 (lower is better)
Translates to: QRMAPTACVGLAAPS*LPCAATRAWRHLRT
Trigger: GGTGCGAAGATGTCTCCAAGCCCTGGTTGCTGCACAGGGAAGGCAGGATGGGGCGGCGAGGCCCACGCAGGCTGTGGGTGCCATGCGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR GCA 90 bp ACCCACAGCCTGCGTGGGCCTCGCCGCCCCATCCTGCCTTCCCTGTaGAGCAACCAGGGCTTGGAGACATCTTCGCACCATCCTGGGACT +
Preference number: 1 (lower is better)
Translates to: THSLRGPRRPILPSL*SNQGLETSSHHPGT
Trigger: AGTCCCAGGATGGTGCGAAGATGTCTCCAAGCCCTGGTTGCTGCACAGGGAAGGCAGGATGGGGCGGCGAGGCCCACGCAGGCTGTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR CCA 90 bp CTCTGCCCTGGCTCGCTCCCTTCCTGCCTCCGAGAACTCTGCATGTaGAGCCCAGCCCCGTCCTCCCCAGGACCGACTTGCTGGTGTAGT +
Preference number: 1 (lower is better)
Translates to: LCPGSLPSCLRELCM*SPAPSSPGPTCWCS
Trigger: ACTACACCAGCAAGTCGGTCCTGGGGAGGACGGGGCTGGGCTCCACATGCAGAGTTCTCGGAGGCAGGAAGGGAGCGAGCCAGGGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR CCA 90 bp GTGCAGCAACCAGGGCTTGGAGACATCTTCGCACCATCCTGGGACTaGGCAGCGCCACCCCCTGGGTGCTCTTCTCTGCCCTGGCTCGCT +
Preference number: 1 (lower is better)
Translates to: VQQPGLGDIFAPSWD*AAPPPGCSSLPWLA
Trigger: AGCGAGCCAGGGCAGAGAAGAGCACCCAGGGGGTGGCGCTGCCCAGTCCCAGGATGGTGCGAAGATGTCTCCAAGCCCTGGTTGCTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR CCA 90 bp TGTCAACTGTTCCAGCCCCACTCGGAACAAGCTGCCACCAACGCATaGCACCCACAGCCTGCGTGGGCCTCGCCGCCCCATCCTGCCTTC +
Preference number: 1 (lower is better)
Translates to: CQLFQPHSEQAATNA*HPQPAWASPPHPAF
Trigger: GAAGGCAGGATGGGGCGGCGAGGCCCACGCAGGCTGTGGGTGCCATGCGTTGGTGGCAGCTTGTTCCGAGTGGGGCTGGAACAGTTGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR CCA 90 bp GGATGCCCACGCCACGCACACTGCAGCACTGGGAGCTGCACTGGGTaGACGGGAAGGACGCAAACTCCAAGCAGCTGCTGCCCCTCAGTC +
Preference number: 1 (lower is better)
Translates to: GCPRHAHCSTGSCTG*TGRTQTPSSCCPSV
Trigger: GACTGAGGGGCAGCAGCTGCTTGGAGTTTGCGTCCTTCCCGTCCACCCAGTGCAGCTCCCAGTGCTGCAGTGTGCGTGGCGTGGGCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432667.5
3UTR GCA 90 bp CAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCACTGGGAGCTaGACTGGGTGGACGGGAAGGACGCAAACTCCAAGCAGCTGCTGC +
Preference number: 1 (lower is better)
Translates to: QLEGCPRHAHCSTGS*TGWTGRTQTPSSCC
Trigger: GCAGCAGCTGCTTGGAGTTTGCGTCCTTCCCGTCCACCCAGTGCAGCTCCCAGTGCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
3UTR CCA 90 bp TTCCCTGTGCAGCAACCAGGGCTTGGAGACATCTTCGCACCATCCTaGGACTGGGCAGCGCCACCCCCTGGGTGCTCTTCTCTGCCCTGG +
Preference number: 1 (lower is better)
Translates to: FPVQQPGLGDIFAPS*DWAAPPPGCSSLPW
Trigger: CCAGGGCAGAGAAGAGCACCCAGGGGGTGGCGCTGCCCAGTCCCAGGATGGTGCGAAGATGTCTCCAAGCCCTGGTTGCTGCACAGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR GCA 90 bp TTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTaGAGCACTGGGAGCTGCACTGGGTGGACGGGAAGGACGCAAACT +
Preference number: 1 (lower is better)
Translates to: FQTMSQLEGCPRHAH*STGSCTGWTGRTQT
Trigger: AGTTTGCGTCCTTCCCGTCCACCCAGTGCAGCTCCCAGTGCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
3UTR TCA 90 bp CATCTTTCTGTCCCACTTCTCAGCCACAAAGGCCCGAGAGGGGCATaGACTTGGCTGGTGAGCTCTGCACCTCAACATTCTCTTCCCAGG +
Preference number: 1 (lower is better)
Translates to: HLSVPLLSHKGPRGA*TWLVSSAPQHSLPR
Trigger: CCTGGGAAGAGAATGTTGAGGTGCAGAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCCTTTGTGGCTGAGAAGTGGGACAGAAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR TCA 90 bp ACTGGAACATCGGAGGAAGAGGAGCTAGAAAGCTTACCAGGCCGATaGGGATGCTTGCTGTCAACTGTTCCAGCCCCACTCGGAACAAGC +
Preference number: 1 (lower is better)
Translates to: TGTSEEEELESLPGR*GCLLSTVPAPLGTS
Trigger: GCTTGTTCCGAGTGGGGCTGGAACAGTTGACAGCAAGCATCCTCATCGGCCTGGTAAGCTTTCTAGCTCCTCTTCCTCCGATGTTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR CCA 90 bp ACTCAGTTCCACATGGCCGGGGAGGCCTCGGGAAACTTACAATCATaGCAGAGGGAGAAACAAGCACCTTCTTCACAAGGCAGCAGGAGA +
Preference number: 1 (lower is better)
Translates to: TQFHMAGEASGNLQS*QREKQAPSSQGSRR
Trigger: TCTCCTGCTGCCTTGTGAAGAAGGTGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGAGGCCTCCCCGGCCATGTGGAACTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR TCA 90 bp CACTTCTCAGCCACAAAGGCCCGAGAGGGGCATGAACTTGGCTGGTaGGCTCTGCACCTCAACATTCTCTTCCCAGGCTTGTCTAATCAA +
Preference number: 1 (lower is better)
Translates to: HFSATKAREGHELGW*ALHLNILFPGLSNQ
Trigger: TTGATTAGACAAGCCTGGGAAGAGAATGTTGAGGTGCAGAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCCTTTGTGGCTGAGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR CCA 90 bp TGTCCTCAGGTTCCTTTCAGGGCCTGTGCCAGTCAGCGCCTCCCCTaGCATAGGTCTTGTGCAATTTCTAATGACAGCATGATTCGGAGA +
Preference number: 1 (lower is better)
Translates to: CPQVPFRACASQRLP*HRSCAISNDSMIRR
Trigger: TCTCCGAATCATGCTGTCATTAGAAATTGCACAAGACCTATGCCAGGGGAGGCGCTGACTGGCACAGGCCCTGAAAGGAACCTGAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR GCA 90 bp TTAAATAAAACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATaGCCACGCCACGCACACTGCAGCACTGGGAGCTGCACTGGGTGG +
Preference number: 1 (lower is better)
Translates to: LNKTTVFQTMSQLEG*PRHAHCSTGSCTGW
Trigger: CCACCCAGTGCAGCTCCCAGTGCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGTTTTATTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
3UTR GCA 90 bp CAGCCACAAAGGCCCGAGAGGGGCATGAACTTGGCTGGTGAGCTCTaGACCTCAACATTCTCTTCCCAGGCTTGTCTAATCAAAGATAAC +
Preference number: 1 (lower is better)
Translates to: QPQRPERGMNLAGEL*TSTFSSQACLIKDN
Trigger: GTTATCTTTGATTAGACAAGCCTGGGAAGAGAATGTTGAGGTGCAGAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCCTTTGTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR GCA 90 bp AGCTGCACTGGGTGGACGGGAAGGACGCAAACTCCAAGCAGCTGCTaGCCCTCAGTCTTCTTTCCTTCTCCTTTTCTTTTCCTTTCTTCT +
Preference number: 1 (lower is better)
Translates to: SCTGWTGRTQTPSSC*PSVFFPSPFLFLSS
Trigger: AGAAGAAAGGAAAAGAAAAGGAGAAGGAAAGAAGACTGAGGGGCAGCAGCTGCTTGGAGTTTGCGTCCTTCCCGTCCACCCAGTGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432667.5
3UTR CCA 90 bp GTTGTGAGGTTTTCACGGTTCTTCTCCGAGGGTCACTTGTCAGCTTaGGAGGAGGTGGAACCTCAGCTCTTCACAGTTCCTGATGATACA +
Preference number: 1 (lower is better)
Translates to: VVRFSRFFSEGHLSA*EEVEPQLFTVPDDT
Trigger: TGTATCATCAGGAACTGTGAAGAGCTGAGGTTCCACCTCCTCCCAAGCTGACAAGTGACCCTCGGAGAAGAACCGTGAAAACCTCACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR TCA 90 bp AGTCGACCAGCAAGAGGGGCTTCAGTAAAGAGGGGAAGGCTGCACTaGAAACATGTTCTGGTTAACTTGGTGAAAGAAGAAGGGTGCTCC +
Preference number: 1 (lower is better)
Translates to: SRPARGASVKRGRLH*KHVLVNLVKEEGCS
Trigger: GGAGCACCCTTCTTCTTTCACCAAGTTAACCAGAACATGTTTTCAGTGCAGCCTTCCCCTCTTTACTGAAGCCCCTCTTGCTGGTCGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR GCA 90 bp AAAGATCAGGCACCTGAAGACGCATGTCCTGATGGATACATTCAGTaGTGGCTGAAAAGCCAACTTCAGTGTGTGCCCTACCACTGTGGA +
Preference number: 1 (lower is better)
Translates to: KDQAPEDACPDGYIQ*WLKSQLQCVPYHCG
Trigger: TCCACAGTGGTAGGGCACACACTGAAGTTGGCTTTTCAGCCAGCACTGAATGTATCCATCAGGACATGCGTCTTCAGGTGCCTGATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR CCA 90 bp GATCAGGCACCTGAAGACGCATGTCCTGATGGATACATTCAGTGCTaGCTGAAAAGCCAACTTCAGTGTGTGCCCTACCACTGTGGATAT +
Preference number: 1 (lower is better)
Translates to: DQAPEDACPDGYIQC*LKSQLQCVPYHCGY
Trigger: ATATCCACAGTGGTAGGGCACACACTGAAGTTGGCTTTTCAGCCAGCACTGAATGTATCCATCAGGACATGCGTCTTCAGGTGCCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR TCA 90 bp AGTGACAACCAGGTGTCTCCAAACTTTGCCCCATGTCTTGGAAGGTaGAAACACCCTCTACTGCGAACTGTGGCATGCACTAGAAAACAC +
Preference number: 1 (lower is better)
Translates to: SDNQVSPNFAPCLGR*KHPLLRTVACTRKH
Trigger: GTGTTTTCTAGTGCATGCCACAGTTCGCAGTAGAGGGTGTTTTCACCTTCCAAGACATGGGGCAAAGTTTGGAGACACCTGGTTGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR TCA 90 bp AGCGCCTCCCCTGGCATAGGTCTTGTGCAATTTCTAATGACAGCATaGTTCGGAGACTATAATAGCTACACCTTCCCCCAAAGCGAGGAA +
Preference number: 1 (lower is better)
Translates to: SASPGIGLVQFLMTA*FGDYNSYTFPQSEE
Trigger: TTCCTCGCTTTGGGGGAAGGTGTAGCTATTATAGTCTCCGAATCATGCTGTCATTAGAAATTGCACAAGACCTATGCCAGGGGAGGCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR CCA 90 bp GAGCCTGAAACCAGTGTGCTCTGTGCAACCCCCAGTGCTTTAAAGTaGGATTGCACCTGTGCTTTCGTAAATTACTCAACTGCTGATCAT +
Preference number: 1 (lower is better)
Translates to: EPETSVLCATPSALK*DCTCAFVNYSTADH
Trigger: ATGATCAGCAGTTGAGTAATTTACGAAAGCACAGGTGCAATCCCACTTTAAAGCACTGGGGGTTGCACAGAGCACACTGGTTTCAGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR TCA 90 bp CAGAACACCAGGACATTAGGAAAGACACGCTTCTCCATGGAGTGTTaGCTTCAGGGCTTCCATTCTGTTTTCAGTAAAGCAGCCCATAAC +
Preference number: 1 (lower is better)
Translates to: QNTRTLGKTRFSMEC*LQGFHSVFSKAAHN
Trigger: GTTATGGGCTGCTTTACTGAAAACAGAATGGAAGCCCTGAAGTCAACACTCCATGGAGAAGCGTGTCTTTCCTAATGTCCTGGTGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR GCA 90 bp GAAACCAGTGTGCTCTGTGCAACCCCCAGTGCTTTAAAGTGGGATTaGACCTGTGCTTTCGTAAATTACTCAACTGCTGATCATTTTGGC +
Preference number: 1 (lower is better)
Translates to: ETSVLCATPSALKWD*TCAFVNYSTADHFG
Trigger: GCCAAAATGATCAGCAGTTGAGTAATTTACGAAAGCACAGGTGCAATCCCACTTTAAAGCACTGGGGGTTGCACAGAGCACACTGGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR GCA 90 bp CTGAGATACAACGTATTTTCCAAGAGCTTCCTTCCAAGGTCTCTCTaGCCCAGCACAGCTGACATTTCATGTCAAGTCATTGTCTGTGAT +
Preference number: 1 (lower is better)
Translates to: LRYNVFSKSFLPRSL*PSTADISCQVIVCD
Trigger: ATCACAGACAATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAGAGAGACCTTGGAAGGAAGCTCTTGGAAAATACGTTGTATCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR TCA 90 bp TACCCACATAACCACAATGATCATGGCATTCACCAGCAGTGGGGCTaGAAATACTATAGAAATGAACATCCCCCTGGAGTCGAAATACTG +
Preference number: 1 (lower is better)
Translates to: YPHNHNDHGIHQQWG*KYYRNEHPPGVEIL
Trigger: CAGTATTTCGACTCCAGGGGGATGTTCATTTCTATAGTATTTTCAGCCCCACTGCTGGTGAATGCCATGATCATTGTGGTTATGTGGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432667.5
3UTR GCA 90 bp AAGGGAGAAGGAACCAGGAGGATGGAAACAGGATTCTCCCCTCAGTaGAACTATAATTCATGGAATTCAAAGTTCAAGCACACAGAACTG +
Preference number: 1 (lower is better)
Translates to: KGEGTRRMETGFSPQ*NYNSWNSKFKHTEL
Trigger: CAGTTCTGTGTGCTTGAACTTTGAATTCCATGAATTATAGTTGCACTGAGGGGAGAATCCTGTTTCCATCCTCCTGGTTCCTTCTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
3UTR TCA 90 bp AAAAATGCACAGTCTCTACAAACTCCCTGGTTTCTTTTCTGTCAGTaGAGTCAAATATCTACACAACGGCCCTGGACAATGCTACAGGGA +
Preference number: 1 (lower is better)
Translates to: KNAQSLQTPWFLFCQ*SQISTQRPWTMLQG
Trigger: TCCCTGTAGCATTGTCCAGGGCCGTTGTGTAGATATTTGACTTCACTGACAGAAAAGAAACCAGGGAGTTTGTAGAGACTGTGCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR TCA 90 bp CAATGTGTTTGTCGTTGTAACTTGTTTAAACTAACTTCACTGTTGTaGGGTTTTCACGGTTCTTCTCCGAGGGTCACTTGTCAGCTTGGG +
Preference number: 1 (lower is better)
Translates to: QCVCRCNLFKLTSLL*GFHGSSPRVTCQLG
Trigger: CCCAAGCTGACAAGTGACCCTCGGAGAAGAACCGTGAAAACCTCACAACAGTGAAGTTAGTTTAAACAAGTTACAACGACAAACACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR CCA 90 bp TTTGACAGGAACCAAGAGCCACTGGGCAGGAGCTATTTTATAAAGTaGATATTGCAAAGTAACAGTATGCCTGTCCTAACAGAACTGGGA +
Preference number: 1 (lower is better)
Translates to: FDRNQEPLGRSYFIK*ILQSNSMPVLTELG
Trigger: TCCCAGTTCTGTTAGGACAGGCATACTGTTACTTTGCAATATCCACTTTATAAAATAGCTCCTGCCCAGTGGCTCTTGGTTCCTGTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR CCA 90 bp AGGAGGATGGAAACAGGATTCTCCCCTCAGTGCAACTATAATTCATaGAATTCAAAGTTCAAGCACACAGAACTGAAGGCATCTCTGATG +
Preference number: 1 (lower is better)
Translates to: RRMETGFSPQCNYNS*NSKFKHTELKASLM
Trigger: CATCAGAGATGCCTTCAGTTCTGTGTGCTTGAACTTTGAATTCCATGAATTATAGTTGCACTGAGGGGAGAATCCTGTTTCCATCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
3UTR CCA 90 bp ACACAGACACACACATGCAGAATGAAAATCAAAGACCACACGTCATaGTTTCACACTGACATGTCATCAGCATCAAATTCATGCAAAGCT +
Preference number: 1 (lower is better)
Translates to: TQTHTCRMKIKDHTS*FHTDMSSASNSCKA
Trigger: AGCTTTGCATGAATTTGATGCTGATGACATGTCAGTGTGAAACCATGACGTGTGGTCTTTGATTTTCATTCTGCATGTGTGTGTCTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR GCA 90 bp CACACGTCATGGTTTCACACTGACATGTCATCAGCATCAAATTCATaGAAAGCTAGCAATACTGTTACACTACTTTATCACAGGCAAACT +
Preference number: 1 (lower is better)
Translates to: HTSWFHTDMSSASNS*KASNTVTLLYHRQT
Trigger: AGTTTGCCTGTGATAAAGTAGTGTAACAGTATTGCTAGCTTTGCATGAATTTGATGCTGATGACATGTCAGTGTGAAACCATGACGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR GCA 90 bp TCAGTCTTCTTTCCTTCTCCTTTTCTTTTCCTTTCTTCTCTCTTGTaGATTCTTCAGGTCAGTCATCACATTCAAAGTCTTCCATACCCA +
Preference number: 1 (lower is better)
Translates to: SVFFPSPFLFLSSLL*ILQVSHHIQSLPYP
Trigger: TGGGTATGGAAGACTTTGAATGTGATGACTGACCTGAAGAATGCACAAGAGAGAAGAAAGGAAAAGAAAAGGAGAAGGAAAGAAGACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432667.5
3UTR-3UTR GCA 90 bp CTGTGCAGCAACCAGGGCTTGGAGACATCTTCGCACCATCCTGGGACTGGGCAGTGCAGCACTGGGAGCTaGACTGGGTGGACGGGAAGG +
Preference number: 2 (lower is better)
Translates to: LCSNQGLETSSHHPGTGQCSTGS*TGWTGR
Trigger: CCTTCCCGTCCACCCAGTGCAGCTCCCAGTGCTGCA...CTGCCCAGTCCCAGGATGGTGCGAAGATGTCTCCAAGCCCTGGTTGCTGCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR-3UTR GCA 90 bp CCCACTTCTCAGCCACAAAGGCCCGAGAGGGGCATGAACTTGGCTGGTGAGCTCAGTCAGCTGGAAGGATaGCCACGCCACGCACACTGC +
Preference number: 2 (lower is better)
Translates to: PTSQPQRPERGMNLAGELSQLEG*PRHAHC
Trigger: GCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACT...GAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCCTTTGTGGCTGAGAAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CCA 90 bp GAAGCCAGGAGCACCACCCCCTCCAGTGACAACCAGGTGTCTCCAAACTTTGCCCGCACACTGCAGCACTaGGAGCTGCACTGGGTGGAC +
Preference number: 2 (lower is better)
Translates to: EARSTTPSSDNQVSPNFARTLQH*ELHWVD
Trigger: GTCCACCCAGTGCAGCTCCCAGTGCTGCAGTGTGCG...GGCAAAGTTTGGAGACACCTGGTTGTCACTGGAGGGGGTGGTGCTCCTGGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR GCA 90 bp CAGCCACAAAGGCCCGAGAGGGGCATGAACTTGGCTGGTGAGCTCTGCACCTCAAGGAGGAGGGCATGGTaGCCATGTACAGGTGGCACT +
Preference number: 2 (lower is better)
Translates to: QPQRPERGMNLAGELCTSRRRAW*PCTGGT
Trigger: AGTGCCACCTGTACATGGGCACCATGCCCTCCTCCT...TGAGGTGCAGAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCCTTTGTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CCA 90 bp GCTGACCCAGGCACACAGGATTTTATGCATCACCCCGGGCTCCACAGGAGAAGCGGGAGCTGCACTGGGTaGACGGGAAGGACGCAAACT +
Preference number: 2 (lower is better)
Translates to: ADPGTQDFMHHPGLHRRSGSCTG*TGRTQT
Trigger: AGTTTGCGTCCTTCCCGTCCACCCAGTGCAGCTCCC...GCTTCTCCTGTGGAGCCCGGGGTGATGCATAAAATCCTGTGTGCCTGGGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CCA 90 bp GAAGCCAGGAGCACCACCCCCTCCAGTGACAACCAGGTGTCTCCAAACTTTGCCGGGAGCTGCACTGGGTaGACGGGAAGGACGCAAACT +
Preference number: 2 (lower is better)
Translates to: EARSTTPSSDNQVSPNFAGSCTG*TGRTQT
Trigger: AGTTTGCGTCCTTCCCGTCCACCCAGTGCAGCTCCC...GGCAAAGTTTGGAGACACCTGGTTGTCACTGGAGGGGGTGGTGCTCCTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR GCA 90 bp ACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCTGCAGCACTGGGAGCTaGACTGGGTGGACGGGAAGG +
Preference number: 2 (lower is better)
Translates to: TVFQTMSQLEGCPRHAHCCSTGS*TGWTGR
Trigger: CCTTCCCGTCCACCCAGTGCAGCTCCCAGTGCTGCA...GCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
3UTR-3UTR GCA 90 bp GCTGACCCAGGCACACAGGATTTTATGCATCACCCCGGGCTCCACAGGAGAAGCAGGAGGAGGGCATGGTaGCCATGTACAGGTGGCACT +
Preference number: 2 (lower is better)
Translates to: ADPGTQDFMHHPGLHRRSRRRAW*PCTGGT
Trigger: AGTGCCACCTGTACATGGGCACCATGCCCTCCTCCT...GCTTCTCCTGTGGAGCCCGGGGTGATGCATAAAATCCTGTGTGCCTGGGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CCA 90 bp ACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCCGCACACTGCAGCACTaGGAGCTGCACTGGGTGGAC +
Preference number: 2 (lower is better)
Translates to: TVFQTMSQLEGCPRHAHCRTLQH*ELHWVD
Trigger: GTCCACCCAGTGCAGCTCCCAGTGCTGCAGTGTGCG...GCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
3UTR-3UTR CCA 90 bp ACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCGGGAGCTGCACTGGGTaGACGGGAAGGACGCAAACT +
Preference number: 2 (lower is better)
Translates to: TVFQTMSQLEGCPRHAHCGSCTG*TGRTQT
Trigger: AGTTTGCGTCCTTCCCGTCCACCCAGTGCAGCTCCC...GCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
3UTR-3UTR TCA 90 bp CTGTGCAGCAACCAGGGCTTGGAGACATCTTCGCACCATCCTGGGACTGGGCAGCGGTTTTTCAAACCATaGGTCAGCTGGAAGGATGCC +
Preference number: 2 (lower is better)
Translates to: LCSNQGLETSSHHPGTGQRFFKP*VSWKDA
Trigger: GGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCG...CTGCCCAGTCCCAGGATGGTGCGAAGATGTCTCCAAGCCCTGGTTGCTGCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR-3UTR TCA 90 bp CAAGGCAGCAGGAGAGAGACAGTGACAGCAGGGGAAACTGCTGTCTTTAAAACCGGCCCGAGAGGGGCATaGACTTGGCTGGTGAGCTCT +
Preference number: 2 (lower is better)
Translates to: QGSRRETVTAGETAVFKTGPRGA*TWLVSS
Trigger: AGAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCC...GGTTTTAAAGACAGCAGTTTCCCCTGCTGTCACTGTCTCTCTCCTGCTGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR TCA 90 bp CACCAGGACATTAGGAAAGACACGCTTCTCCATGGAGTGTTGACTTCAGGGCTTAGGTGGCCAGCCCCATaGGCCAGGGCTCAGTCCAGT +
Preference number: 2 (lower is better)
Translates to: HQDIRKDTLLHGVLTSGLRWPAP*ARAQSS
Trigger: ACTGGACTGAGCCCTGGCTCATGGGGCTGGCCACCT...AAGCCCTGAAGTCAACACTCCATGGAGAAGCGTGTCTTTCCTAATGTCCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432667.5
3UTR-3UTR TCA 90 bp AAAACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCAGGGAGGACAAGCAGGTaGGGAGCACGCAGAGCGCGT +
Preference number: 2 (lower is better)
Translates to: KTTVFQTMSQLEGCPRHAGRTSR*GARRAR
Trigger: ACGCGCTCTGCGTGCTCCTCACCTGCTTGTCCTCCC...TGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432667.5
3UTR-3UTR GCA 90 bp CCCACTTCTCAGCCACAAAGGCCCGAGAGGGGCATGAACTTGGCTGGTGAGCTCCTGCGAACTGTGGCATaGACTAGAAAACACAGCACG +
Preference number: 2 (lower is better)
Translates to: PTSQPQRPERGMNLAGELLRTVA*TRKHST
Trigger: CGTGCTGTGTTTTCTAGTGCATGCCACAGTTCGCAG...GAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCCTTTGTGGCTGAGAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CCA 90 bp CAAGGCAGCAGGAGAGAGACAGTGACAGCAGGGGAAACTGCTGTCTTTAAAACCCACTGGGAGCTGCACTaGGTGGACGGGAAGGACGCA +
Preference number: 2 (lower is better)
Translates to: QGSRRETVTAGETAVFKTHWELH*VDGKDA
Trigger: TGCGTCCTTCCCGTCCACCCAGTGCAGCTCCCAGTG...GGTTTTAAAGACAGCAGTTTCCCCTGCTGTCACTGTCTCTCTCCTGCTGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR CAA 90 bp TTCTGTCCCACTTCTCAGCCACAAAGGCCCGAGAGGGGCATGAACTaGGCTGGTGAGCTCTGCACCTCAACATTCTCTTCCCAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: FCPTSQPQRPERGMN*AGELCTSTFSSQAC
Trigger: ACAAGCCTGGGAAGAGAATGTTGAGGTGCAGAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCCTTTGTGGCTGAGAAGTGGGACAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR GCA 90 bp TCTAACTGTACAGGCCGCTGTGAAACTGGAACATCGGAGGAAGAGGAGCTAGAACCACGCCACGCACACTaGAGCACTGGGAGCTGCACT +
Preference number: 2 (lower is better)
Translates to: SNCTGRCETGTSEEEELEPRHAH*STGSCT
Trigger: AGTGCAGCTCCCAGTGCTGCAGTGTGCGTGGCGTGG...TTCTAGCTCCTCTTCCTCCGATGTTCCAGTTTCACAGCGGCCTGTACAGTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR-3UTR GCA 90 bp CACGAGGAGGAGGGCATGGTGCCCATGTACAGGTGGCACTGTTTATTATTGAGTAGTCAGCTGGAAGGATaGCCACGCCACGCACACTGC +
Preference number: 2 (lower is better)
Translates to: HEEEGMVPMYRWHCLLLSSQLEG*PRHAHC
Trigger: GCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACT...ACTCAATAATAAACAGTGCCACCTGTACATGGGCACCATGCCCTCCTCCTCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR GCA 90 bp CCCACTTCTCAGCCACAAAGGCCCGAGAGGGGCATGAACTTGGCTGGTGAGCTCGCCAACTTCAGTGTGTaGCCTACCACTGTGGATATT +
Preference number: 2 (lower is better)
Translates to: PTSQPQRPERGMNLAGELANFSV*PTTVDI
Trigger: AATATCCACAGTGGTAGGGCACACACTGAAGTTGGC...GAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCCTTTGTGGCTGAGAAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR GCA 90 bp CATGGCCGGGGAGGCCTCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCCTTCCAAGGTCTCTCTaGCCCAGCACAGCTGACATT +
Preference number: 2 (lower is better)
Translates to: HGRGGLGKLTIMAEGETSLPRSL*PSTADI
Trigger: AATGTCAGCTGTGCTGGGGCAGAGAGACCTTGGAAG...GCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGAGGCCTCCCCGGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR GCA 90 bp TCTAACTGTACAGGCCGCTGTGAAACTGGAACATCGGAGGAAGAGGAGCTAGAACTGGGTGCTCTTCTCTaGCCTGGCTCGCTCCCTTCC +
Preference number: 2 (lower is better)
Translates to: SNCTGRCETGTSEEEELELGALL*PGSLPS
Trigger: GGAAGGGAGCGAGCCAGGGCAGAGAAGAGCACCCAG...TTCTAGCTCCTCTTCCTCCGATGTTCCAGTTTCACAGCGGCCTGTACAGTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR-3UTR GCA 90 bp GGTGGCCAGCCCCATGAGCCAGGGCTCAGTCCAGTCCGTCTGCAAGTATCCAGAAAGGCATCTCTGATGTaGTCCTTTCGTTTGTGGAAC +
Preference number: 2 (lower is better)
Translates to: GGQPHEPGLSPVRLQVSRKASLM*SFRLWN
Trigger: GTTCCACAAACGAAAGGAGCACATCAGAGATGCCTT...TCTGGATACTTGCAGACGGACTGGACTGAGCCCTGGCTCATGGGGCTGGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
3UTR-3UTR CCA 90 bp GTGGCCAGCCCCATGAGCCAGGGCTCAGTCCAGTCCGTCTGCAAGTATCCAGAGGGATACATTCAGTGCTaGCTGAAAAGCCAACTTCAG +
Preference number: 2 (lower is better)
Translates to: VASPMSQGSVQSVCKYPEGYIQC*LKSQLQ
Trigger: CTGAAGTTGGCTTTTCAGCCAGCACTGAATGTATCC...CTCTGGATACTTGCAGACGGACTGGACTGAGCCCTGGCTCATGGGGCTGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432667.5
3UTR-3UTR CCA 90 bp GGAGCTGCACTGGGTGGACGGGAAGGACGCAAACTCCAAGCAGCTGCTGCCCCTGTGCCCATGTACAGGTaGCACTGTTTATTATTGAGT +
Preference number: 2 (lower is better)
Translates to: GAALGGREGRKLQAAAAPVPMYR*HCLLLS
Trigger: ACTCAATAATAAACAGTGCCACCTGTACATGGGCAC...AGGGGCAGCAGCTGCTTGGAGTTTGCGTCCTTCCCGTCCACCCAGTGCAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432667.5
3UTR-3UTR TCA 90 bp CAGCCACAAAGGCCCGAGAGGGGCATGAACTTGGCTGGTGAGCTCTGCACCTCATCAAATTCCCAGTTATaGAGCTCTGCAGAGACCGTT +
Preference number: 2 (lower is better)
Translates to: QPQRPERGMNLAGELCTSSNSQL*SSAETV
Trigger: AACGGTCTCTGCAGAGCTTCATAACTGGGAATTTGA...TGAGGTGCAGAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCCTTTGTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR GCA 90 bp ACGTATTTTCCAAGAGCTTCCTTCCAAGGTCTCTCTGCCCCAGCACAGCTGACAAGGAGGAGGGCATGGTaGCCATGTACAGGTGGCACT +
Preference number: 2 (lower is better)
Translates to: TYFPRASFQGLSAPAQLTRRRAW*PCTGGT
Trigger: AGTGCCACCTGTACATGGGCACCATGCCCTCCTCCT...TGTCAGCTGTGCTGGGGCAGAGAGACCTTGGAAGGAAGCTCTTGGAAAATACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR GCA 90 bp CATGGCCGGGGAGGCCTCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCAACGGCCCTGGACAATaGTACAGGGAGGACACATTA +
Preference number: 2 (lower is better)
Translates to: HGRGGLGKLTIMAEGETSNGPGQ*YREDTL
Trigger: TAATGTGTCCTCCCTGTAGCATTGTCCAGGGCCGTT...GCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGAGGCCTCCCCGGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR TCA 90 bp CATCCCACTCAACTTCGCGCCACTGAAGCTCCTTACCCTGAATTCCACCCCCAGACATTCAGTGCTGGCTaGAAAGCCAACTTCAGTGTG +
Preference number: 2 (lower is better)
Translates to: HPTQLRATEAPYPEFHPQTFSAG*KANFSV
Trigger: CACACTGAAGTTGGCTTTTCAGCCAGCACTGAATGT...CTGGGGGTGGAATTCAGGGTAAGGAGCTTCAGTGGCGCGAAGTTGAGTGGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR-3UTR CCA 90 bp TCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCACCTTCTTCACAAGGCGGGAGCTGCACTGGGTaGACGGGAAGGACGCAAACT +
Preference number: 2 (lower is better)
Translates to: SGNLQSWQREKQAPSSQGGSCTG*TGRTQT
Trigger: AGTTTGCGTCCTTCCCGTCCACCCAGTGCAGCTCCC...GCCTTGTGAAGAAGGTGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CCA 90 bp GCCGGGGAGGCCTCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCACCTCTTTGCCCCATGTCTTaGAAGGTGAAAACACCCTCT +
Preference number: 2 (lower is better)
Translates to: AGEASGNLQSWQREKQAPLCPMS*KVKTPS
Trigger: AGAGGGTGTTTTCACCTTCCAAGACATGGGGCAAAG...AGGTGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGAGGCCTCCCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR GCA 90 bp CGTCTGCAAGTATCCAGAGAGCATTGCCAGGCCTCAGAGAAACATGGGGACAGGGCCAACTTCAGTGTGTaGCCTACCACTGTGGATATT +
Preference number: 2 (lower is better)
Translates to: RLQVSREHCQASEKHGDRANFSV*PTTVDI
Trigger: AATATCCACAGTGGTAGGGCACACACTGAAGTTGGC...CCTGTCCCCATGTTTCTCTGAGGCCTGGCAATGCTCTCTGGATACTTGCAGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432667.5
3UTR-3UTR CCA 90 bp GCCGGGGAGGCCTCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCACCTCCCTCCCTTGACACATaGGGATTACAATTTGAGATG +
Preference number: 2 (lower is better)
Translates to: AGEASGNLQSWQREKQAPPSLDT*GLQFEM
Trigger: CATCTCAAATTGTAATCCCCATGTGTCAAGGGAGGG...AGGTGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGAGGCCTCCCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CCA 90 bp CATGGCCGGGGAGGCCTCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCCCCTCCCTTGACACATaGGGATTACAATTTGAGATG +
Preference number: 2 (lower is better)
Translates to: HGRGGLGKLTIMAEGETSPSLDT*GLQFEM
Trigger: CATCTCAAATTGTAATCCCCATGTGTCAAGGGAGGG...GCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGAGGCCTCCCCGGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR CAA 90 bp AACTTCACTGTTGTGAGGTTTTCACGGTTCTTCTCCGAGGGTCACTaGTCAGCTTGGGAGGAGGTGGAACCTCAGCTCTTCACAGTTCCT +
Preference number: 2 (lower is better)
Translates to: NFTVVRFSRFFSEGH*SAWEEVEPQLFTVP
Trigger: AGGAACTGTGAAGAGCTGAGGTTCCACCTCCTCCCAAGCTGACAAGTGACCCTCGGAGAAGAACCGTGAAAACCTCACAACAGTGAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR-3UTR TCA 90 bp CAAGGCAGCAGGAGAGAGACAGTGACAGCAGGGGAAACTGCTGTCTTTAAAACCCTGCCCCAGCACAGCTaGCATTTCATGTCAAGTCAT +
Preference number: 2 (lower is better)
Translates to: QGSRRETVTAGETAVFKTLPQHS*HFMSSH
Trigger: ATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAG...GGTTTTAAAGACAGCAGTTTCCCCTGCTGTCACTGTCTCTCTCCTGCTGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR GCA 90 bp CACCAGGACATTAGGAAAGACACGCTTCTCCATGGAGTGTTGACTTCAGGGCTTCCAGTTATGAAGCTCTaGAGAGACCGTTCCCACAGC +
Preference number: 2 (lower is better)
Translates to: HQDIRKDTLLHGVLTSGLPVMKL*RDRSHS
Trigger: GCTGTGGGAACGGTCTCTGCAGAGCTTCATAACTGG...AAGCCCTGAAGTCAACACTCCATGGAGAAGCGTGTCTTTCCTAATGTCCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR GCA 90 bp ATGGAGGGCCAAGCTGTGAGTGAGTTGGGCTTAGGGATCCATAAACCCAGAGATAACGGCCCTGGACAATaGTACAGGGAGGACACATTA +
Preference number: 2 (lower is better)
Translates to: MEGQAVSELGLGIHKPRDNGPGQ*YREDTL
Trigger: TAATGTGTCCTCCCTGTAGCATTGTCCAGGGCCGTT...ATCTCTGGGTTTATGGATCCCTAAGCCCAACTCACTCACAGCTTGGCCCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR-3UTR TCA 90 bp GAGGAGGGCATGGTGCCCATGTACAGGTGGCACTGTTTATTATTGAGTTTCATAACCGTTCCCACAGCCTaGCTACAAAGATCAGGCACC +
Preference number: 2 (lower is better)
Translates to: EEGMVPMYRWHCLLLSFITVPTA*LQRSGT
Trigger: GGTGCCTGATCTTTGTAGTCAGGCTGTGGGAACGGT...TATGAAACTCAATAATAAACAGTGCCACCTGTACATGGGCACCATGCCCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR TCA 90 bp CCAGGTGTCTCCAAACTTTGCCCCATGTCTTGGAAGGTGAAAACACCCTCTACTCTACAGGTCCACATTTaGCAGGAACCAAGAGCCACT +
Preference number: 2 (lower is better)
Translates to: PGVSKLCPMSWKVKTPSTLQVHI*QEPRAT
Trigger: AGTGGCTCTTGGTTCCTGTCAAATGTGGACCTGTAG...AGTAGAGGGTGTTTTCACCTTCCAAGACATGGGGCAAAGTTTGGAGACACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR TCA 90 bp CAAGGCAGCAGGAGAGAGACAGTGACAGCAGGGGAAACTGCTGTCTTTAAAACCATCAGGTCCCTCCCTTaGCACATGGGGATTACAATT +
Preference number: 2 (lower is better)
Translates to: QGSRRETVTAGETAVFKTIRSLP*HMGITI
Trigger: AATTGTAATCCCCATGTGTCAAGGGAGGGACCTGAT...GGTTTTAAAGACAGCAGTTTCCCCTGCTGTCACTGTCTCTCTCCTGCTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR GCA 90 bp AAACACCCTCTACTGCGAACTGTGGCATGCACTAGAAAACACAGCACGAGGAGGGCCAACTTCAGTGTGTaGCCTACCACTGTGGATATT +
Preference number: 2 (lower is better)
Translates to: KHPLLRTVACTRKHSTRRANFSV*PTTVDI
Trigger: AATATCCACAGTGGTAGGGCACACACTGAAGTTGGC...CCTCCTCGTGCTGTGTTTTCTAGTGCATGCCACAGTTCGCAGTAGAGGGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR GCA 90 bp TCTCTCTGCCCCAGCACAGCTGACATTTCATGTCAAGTCATTGTCTGTGATGCGCTGCGAACTGTGGCATaGACTAGAAAACACAGCACG +
Preference number: 2 (lower is better)
Translates to: SLCPSTADISCQVIVCDALRTVA*TRKHST
Trigger: CGTGCTGTGTTTTCTAGTGCATGCCACAGTTCGCAG...CGCATCACAGACAATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR GCA 90 bp CCAGGTGTCTCCAAACTTTGCCCCATGTCTTGGAAGGTGAAAACACCCTCTACTTTGGCTGGTGAGCTCTaGACCTCAACATTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: PGVSKLCPMSWKVKTPSTLAGEL*TSTFSS
Trigger: GGAAGAGAATGTTGAGGTGCAGAGCTCACCAGCCAA...AGTAGAGGGTGTTTTCACCTTCCAAGACATGGGGCAAAGTTTGGAGACACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR TCA 90 bp TCTCTCTGCCCCAGCACAGCTGACATTTCATGTCAAGTCATTGTCTGTGATGCGACATTCAGTGCTGGCTaGAAAGCCAACTTCAGTGTG +
Preference number: 2 (lower is better)
Translates to: SLCPSTADISCQVIVCDATFSAG*KANFSV
Trigger: CACACTGAAGTTGGCTTTTCAGCCAGCACTGAATGT...CGCATCACAGACAATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR TCA 90 bp TCATGTCAAGTCATTGTCTGTGATGCGGCTGACCCAGGCACACAGGATTTTATGCTGCCCCAGCACAGCTaGCATTTCATGTCAAGTCAT +
Preference number: 2 (lower is better)
Translates to: SCQVIVCDAADPGTQDFMLPQHS*HFMSSH
Trigger: ATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAG...CATAAAATCCTGTGTGCCTGGGTCAGCCGCATCACAGACAATGACTTGACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR GCA 90 bp TCATGTCAAGTCATTGTCTGTGATGCGGCTGACCCAGGCACACAGGATTTTATGTTGGCTGGTGAGCTCTaGACCTCAACATTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: SCQVIVCDAADPGTQDFMLAGEL*TSTFSS
Trigger: GGAAGAGAATGTTGAGGTGCAGAGCTCACCAGCCAA...CATAAAATCCTGTGTGCCTGGGTCAGCCGCATCACAGACAATGACTTGACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CCA 90 bp ATGGAGGGCCAAGCTGTGAGTGAGTTGGGCTTAGGGATCCATAAACCCAGAGATCTCTACTGCGAACTGTaGCATGCACTAGAAAACACA +
Preference number: 2 (lower is better)
Translates to: MEGQAVSELGLGIHKPRDLYCEL*HALENT
Trigger: TGTGTTTTCTAGTGCATGCCACAGTTCGCAGTAGAG...ATCTCTGGGTTTATGGATCCCTAAGCCCAACTCACTCACAGCTTGGCCCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR-3UTR CCA 90 bp GGTCTCTCTGCCCCAGCACAGCTGACATTTCATGTCAAGTCATTGTCTGTGATGCTTTGCCCCATGTCTTaGAAGGTGAAAACACCCTCT +
Preference number: 2 (lower is better)
Translates to: GLSAPAQLTFHVKSLSVMLCPMS*KVKTPS
Trigger: AGAGGGTGTTTTCACCTTCCAAGACATGGGGCAAAG...CATCACAGACAATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAGAGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CCA 90 bp CTCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCACCTTCTTCACAAGGAAGGAACCAGGAGGATaGAAACAGGATTCTCCCCTC +
Preference number: 2 (lower is better)
Translates to: LGKLTIMAEGETSTFFTRKEPGG*KQDSPL
Trigger: GAGGGGAGAATCCTGTTTCCATCCTCCTGGTTCCTT...CCTTGTGAAGAAGGTGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432667.5
3UTR-3UTR TCA 90 bp GTCTTGGAAGGTGAAAACACCCTCTACTGCGAACTGTGGCATGCACTAGAAAACACATTCAGTGCTGGCTaGAAAGCCAACTTCAGTGTG +
Preference number: 2 (lower is better)
Translates to: VLEGENTLYCELWHALENTFSAG*KANFSV
Trigger: CACACTGAAGTTGGCTTTTCAGCCAGCACTGAATGT...GTTTTCTAGTGCATGCCACAGTTCGCAGTAGAGGGTGTTTTCACCTTCCAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR GCA 90 bp GCATGCTATCCAGATACAATGCACAATCAGTATTCCCTTATTGAACACCTATTTTGCAGCACTGGGAGCTaGACTGGGTGGACGGGAAGG +
Preference number: 2 (lower is better)
Translates to: ACYPDTMHNQYSLIEHLFCSTGS*TGWTGR
Trigger: CCTTCCCGTCCACCCAGTGCAGCTCCCAGTGCTGCA...AAATAGGTGTTCAATAAGGGAATACTGATTGTGCATTGTATCTGGATAGCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR GCA 90 bp AACTATAATTCATGGAATTCAAAGTTCAAGCACACAGAACTGAAGGCATCTCTGTGCAGCACTGGGAGCTaGACTGGGTGGACGGGAAGG +
Preference number: 2 (lower is better)
Translates to: NYNSWNSKFKHTELKASLCSTGS*TGWTGR
Trigger: CCTTCCCGTCCACCCAGTGCAGCTCCCAGTGCTGCA...CAGAGATGCCTTCAGTTCTGTGTGCTTGAACTTTGAATTCCATGAATTATAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432667.5
3UTR-3UTR GCA 90 bp GTCTTGGAAGGTGAAAACACCCTCTACTGCGAACTGTGGCATGCACTAGAAAACGATTGCTCAAAGAGATaGACTTGGCTCAGCCCCAAA +
Preference number: 2 (lower is better)
Translates to: VLEGENTLYCELWHALENDCSKR*TWLSPK
Trigger: TTTGGGGCTGAGCCAAGTGCATCTCTTTGAGCAATC...GTTTTCTAGTGCATGCCACAGTTCGCAGTAGAGGGTGTTTTCACCTTCCAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432667.5
3UTR-3UTR CCA 90 bp GGTGAAAACACCCTCTACTGCGAACTGTGGCATGCACTAGAAAACACAGCACGAGGATACATTCAGTGCTaGCTGAAAAGCCAACTTCAG +
Preference number: 2 (lower is better)
Translates to: GENTLYCELWHALENTARGYIQC*LKSQLQ
Trigger: CTGAAGTTGGCTTTTCAGCCAGCACTGAATGTATCC...TCGTGCTGTGTTTTCTAGTGCATGCCACAGTTCGCAGTAGAGGGTGTTTTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CCA 90 bp AGGTCTCTCTGCCCCAGCACAGCTGACATTTCATGTCAAGTCATTGTCTGTGATCTTTGCCCCATGTCTTaGAAGGTGAAAACACCCTCT +
Preference number: 2 (lower is better)
Translates to: RSLCPSTADISCQVIVCDLCPMS*KVKTPS
Trigger: AGAGGGTGTTTTCACCTTCCAAGACATGGGGCAAAG...ATCACAGACAATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAGAGAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CCA 90 bp CATGGCCGGGGAGGCCTCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCCTGGAGTCGAAATACTaGTATTTCGAAAATAATCTC +
Preference number: 2 (lower is better)
Translates to: HGRGGLGKLTIMAEGETSLESKY*YFENNL
Trigger: GAGATTATTTTCGAAATACCAGTATTTCGACTCCAG...GCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGAGGCCTCCCCGGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432667.5
3UTR-3UTR GCA 90 bp CACCAGGACATTAGGAAAGACACGCTTCTCCATGGAGTGTTGACTTCAGGGCTTGATGGATACATTCAGTaGTGGCTGAAAAGCCAACTT +
Preference number: 2 (lower is better)
Translates to: HQDIRKDTLLHGVLTSGLDGYIQ*WLKSQL
Trigger: AAGTTGGCTTTTCAGCCAGCACTGAATGTATCCATC...AAGCCCTGAAGTCAACACTCCATGGAGAAGCGTGTCTTTCCTAATGTCCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CCA 90 bp TGTGGATATTTAAATAAAACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGACGCACACTGCAGCACTaGGAGCTGCACTGGGTGGAC +
Preference number: 2 (lower is better)
Translates to: CGYLNKTTVFQTMSQLEGRTLQH*ELHWVD
Trigger: GTCCACCCAGTGCAGCTCCCAGTGCTGCAGTGTGCG...TCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGTTTTATTTAAATATCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
3UTR-3UTR CCA 90 bp TCATGTCAAGTCATTGTCTGTGATGCGGCTGACCCAGGCACACAGGATTTTATGTCAAAGAGATGCACTTaGCTCAGCCCCAAAGGTAAA +
Preference number: 2 (lower is better)
Translates to: SCQVIVCDAADPGTQDFMSKRCT*LSPKGK
Trigger: TTTACCTTTGGGGCTGAGCCAAGTGCATCTCTTTGA...CATAAAATCCTGTGTGCCTGGGTCAGCCGCATCACAGACAATGACTTGACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432667.5
3UTR-3UTR GCA 90 bp CAAGGCAGCAGGAGAGAGACAGTGACAGCAGGGGAAACTGCTGTCTTTAAAACCGGTAACTTTCAGAAATaGACAATTAGGCATGCTATC +
Preference number: 2 (lower is better)
Translates to: QGSRRETVTAGETAVFKTGNFQK*TIRHAI
Trigger: GATAGCATGCCTAATTGTGCATTTCTGAAAGTTACC...GGTTTTAAAGACAGCAGTTTCCCCTGCTGTCACTGTCTCTCTCCTGCTGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR CAA 90 bp TCTGTGCAAGTAGACTTTCTTCTACTGGCAAGGACACAATTGCATTaGTTTGTTAAAACTCAGCACCAGATGCTGCAGCAAAGGGACCTG +
Preference number: 2 (lower is better)
Translates to: SVQVDFLLLARTQLH*FVKTQHQMLQQRDL
Trigger: CAGGTCCCTTTGCTGCAGCATCTGGTGCTGAGTTTTAACAAACAAATGCAATTGTGTCCTTGCCAGTAGAAGAAAGTCTACTTGCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR-3UTR GCA 90 bp TCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCACCTTCTTCACAAGGCGATTACAATTTGAGATaGAATTTGGGTGGGGACACA +
Preference number: 2 (lower is better)
Translates to: SGNLQSWQREKQAPSSQGDYNLR*NLGGDT
Trigger: TGTGTCCCCACCCAAATTGCATCTCAAATTGTAATC...GCCTTGTGAAGAAGGTGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR GCA 90 bp AATTCAAAGTTCAAGCACACAGAACTGAAGGCATCTCTGATGTGCTCCTTTCGTGATTGCTCAAAGAGATaGACTTGGCTCAGCCCCAAA +
Preference number: 2 (lower is better)
Translates to: NSKFKHTELKASLMCSFRDCSKR*TWLSPK
Trigger: TTTGGGGCTGAGCCAAGTGCATCTCTTTGAGCAATC...ACGAAAGGAGCACATCAGAGATGCCTTCAGTTCTGTGTGCTTGAACTTTGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
3UTR CAA 90 bp AAAGCAGCCCATAACTTTGCTAGAGAGGGCCTAGCCTCTTGTGAATaGGTTCATCAAACTGAGATACAACGTATTTTCCAAGAGCTTCCT +
Preference number: 2 (lower is better)
Translates to: KAAHNFAREGLASCE*VHQTEIQRIFQELP
Trigger: AGGAAGCTCTTGGAAAATACGTTGTATCTCAGTTTGATGAACCAATTCACAAGAGGCTAGGCCCTCTCTAGCAAAGTTATGGGCTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR CAA 90 bp ATATTGCAAAGTAACAGTATGCCTGTCCTAACAGAACTGGGAGCATaGTGTTCCCAAGCACCTAAATCAACAGAACACCAGGACATTAGG +
Preference number: 2 (lower is better)
Translates to: ILQSNSMPVLTELGA*CSQAPKSTEHQDIR
Trigger: CCTAATGTCCTGGTGTTCTGTTGATTTAGGTGCTTGGGAACACAATGCTCCCAGTTCTGTTAGGACAGGCATACTGTTACTTTGCAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CCA 90 bp ATGATGCTGCCTGGGTATTTCACAGGCATTTGTATAATAAATGAAATGAACTTGTCTACACAACGGCCCTaGACAATGCTACAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: MMLPGYFTGICIINEMNLSTQRP*TMLQGG
Trigger: TCCTCCCTGTAGCATTGTCCAGGGCCGTTGTGTAGA...CAAGTTCATTTCATTTATTATACAAATGCCTGTGAAATACCCAGGCAGCATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR-3UTR CCA 90 bp ATGATGCTGCCTGGGTATTTCACAGGCATTTGTATAATAAATGAAATGAACTTGAGTCAGCGCCTCCCCTaGCATAGGTCTTGTGCAATT +
Preference number: 2 (lower is better)
Translates to: MMLPGYFTGICIINEMNLSQRLP*HRSCAI
Trigger: AATTGCACAAGACCTATGCCAGGGGAGGCGCTGACT...CAAGTTCATTTCATTTATTATACAAATGCCTGTGAAATACCCAGGCAGCATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR CAA 90 bp CCCTCAGTCTTCTTTCCTTCTCCTTTTCTTTTCCTTTCTTCTCTCTaGTGCATTCTTCAGGTCAGTCATCACATTCAAAGTCTTCCATAC +
Preference number: 2 (lower is better)
Translates to: PSVFFPSPFLFLSSL*CILQVSHHIQSLPY
Trigger: GTATGGAAGACTTTGAATGTGATGACTGACCTGAAGAATGCACAAGAGAGAAGAAAGGAAAAGAAAAGGAGAAGGAAAGAAGACTGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432667.5
3UTR-3UTR TCA 90 bp GTAACTTTCAGAAATGCACAATTAGGCATGCTATCCAGATACAATGCACAATCATCAAATTCCCAGTTATaGAGCTCTGCAGAGACCGTT +
Preference number: 2 (lower is better)
Translates to: VTFRNAQLGMLSRYNAQSSNSQL*SSAETV
Trigger: AACGGTCTCTGCAGAGCTTCATAACTGGGAATTTGA...TGATTGTGCATTGTATCTGGATAGCATGCCTAATTGTGCATTTCTGAAAGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CCA 90 bp GCATGCTATCCAGATACAATGCACAATCAGTATTCCCTTATTGAACACCTATTTGGATACATTCAGTGCTaGCTGAAAAGCCAACTTCAG +
Preference number: 2 (lower is better)
Translates to: ACYPDTMHNQYSLIEHLFGYIQC*LKSQLQ
Trigger: CTGAAGTTGGCTTTTCAGCCAGCACTGAATGTATCC...AAATAGGTGTTCAATAAGGGAATACTGATTGTGCATTGTATCTGGATAGCATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CCA 90 bp GTAACTTTCAGAAATGCACAATTAGGCATGCTATCCAGATACAATGCACAATCACTCTACTGCGAACTGTaGCATGCACTAGAAAACACA +
Preference number: 2 (lower is better)
Translates to: VTFRNAQLGMLSRYNAQSLYCEL*HALENT
Trigger: TGTGTTTTCTAGTGCATGCCACAGTTCGCAGTAGAG...TGATTGTGCATTGTATCTGGATAGCATGCCTAATTGTGCATTTCTGAAAGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CCA 90 bp AACTATAATTCATGGAATTCAAAGTTCAAGCACACAGAACTGAAGGCATCTCTGTCAAAGAGATGCACTTaGCTCAGCCCCAAAGGTAAA +
Preference number: 2 (lower is better)
Translates to: NYNSWNSKFKHTELKASLSKRCT*LSPKGK
Trigger: TTTACCTTTGGGGCTGAGCCAAGTGCATCTCTTTGA...CAGAGATGCCTTCAGTTCTGTGTGCTTGAACTTTGAATTCCATGAATTATAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
3UTR-3UTR GCA 90 bp AACTATAATTCATGGAATTCAAAGTTCAAGCACACAGAACTGAAGGCATCTCTGGATGGATACATTCAGTaGTGGCTGAAAAGCCAACTT +
Preference number: 2 (lower is better)
Translates to: NYNSWNSKFKHTELKASLDGYIQ*WLKSQL
Trigger: AAGTTGGCTTTTCAGCCAGCACTGAATGTATCCATC...CAGAGATGCCTTCAGTTCTGTGTGCTTGAACTTTGAATTCCATGAATTATAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432667.5
3UTR-3UTR CCA 90 bp GCATGCTATCCAGATACAATGCACAATCAGTATTCCCTTATTGAACACCTATTTGTGCCCATGTACAGGTaGCACTGTTTATTATTGAGT +
Preference number: 2 (lower is better)
Translates to: ACYPDTMHNQYSLIEHLFVPMYR*HCLLLS
Trigger: ACTCAATAATAAACAGTGCCACCTGTACATGGGCAC...AAATAGGTGTTCAATAAGGGAATACTGATTGTGCATTGTATCTGGATAGCATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR TCA 90 bp ATGATGCTGCCTGGGTATTTCACAGGCATTTGTATAATAAATGAAATGAACTTGGAACTAAGTAACAGGTaGAATCATAAGGATGGCACA +
Preference number: 2 (lower is better)
Translates to: MMLPGYFTGICIINEMNLELSNR*NHKDGT
Trigger: TGTGCCATCCTTATGATTTCACCTGTTACTTAGTTC...CAAGTTCATTTCATTTATTATACAAATGCCTGTGAAATACCCAGGCAGCATCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR GCA 72 bp GCACCCACAGCCTGCGTGGGCCTCGCCGCCCCATCCTaGCTTCCCTGTGCAGCAACCAGGGCTTGGAGACAT +
Preference number: 3 (lower is better)
Translates to: APTACVGLAAPS*LPCAATRAWRH
Trigger: ATGTCTCCAAGCCCTGGTTGCTGCACAGGGAAGGCAGGATGGGGCGGCGAGGCCCACGCAGGCTGTGGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR GCA 72 bp GGAACAAGCTGCCACCAACGCATGGCACCCACAGCCTaGGTGGGCCTCGCCGCCCCATCCTGCCTTCCCTGT +
Preference number: 3 (lower is better)
Translates to: GTSCHQRMAPTA*VGLAAPSCLPC
Trigger: ACAGGGAAGGCAGGATGGGGCGGCGAGGCCCACGCAGGCTGTGGGTGCCATGCGTTGGTGGCAGCTTGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR CCA 72 bp TTCCAGCCCCACTCGGAACAAGCTGCCACCAACGCATaGCACCCACAGCCTGCGTGGGCCTCGCCGCCCCAT +
Preference number: 3 (lower is better)
Translates to: FQPHSEQAATNA*HPQPAWASPPH
Trigger: ATGGGGCGGCGAGGCCCACGCAGGCTGTGGGTGCCATGCGTTGGTGGCAGCTTGTTCCGAGTGGGGCTGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR TCA 72 bp GGAGCACGCAGAGCGCGTGGAAGGTGGCCAGCCCCATaGGCCAGGGCTCAGTCCAGTCCGTCTGCAAGTATC +
Preference number: 3 (lower is better)
Translates to: GARRARGRWPAP*ARAQSSPSASI
Trigger: GATACTTGCAGACGGACTGGACTGAGCCCTGGCTCATGGGGCTGGCCACCTTCCACGCGCTCTGCGTGCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
3UTR GCA 72 bp GGATGCCCACGCCACGCACACTGCAGCACTGGGAGCTaGACTGGGTGGACGGGAAGGACGCAAACTCCAAGC +
Preference number: 3 (lower is better)
Translates to: GCPRHAHCSTGS*TGWTGRTQTPS
Trigger: GCTTGGAGTTTGCGTCCTTCCCGTCCACCCAGTGCAGCTCCCAGTGCTGCAGTGTGCGTGGCGTGGGCATCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
3UTR GCA 72 bp CTGCGTGGGCCTCGCCGCCCCATCCTGCCTTCCCTGTaGAGCAACCAGGGCTTGGAGACATCTTCGCACCAT +
Preference number: 3 (lower is better)
Translates to: LRGPRRPILPSL*SNQGLETSSHH
Trigger: ATGGTGCGAAGATGTCTCCAAGCCCTGGTTGCTGCACAGGGAAGGCAGGATGGGGCGGCGAGGCCCACGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR CCA 72 bp CCCACGCCACGCACACTGCAGCACTGGGAGCTGCACTaGGTGGACGGGAAGGACGCAAACTCCAAGCAGCTG +
Preference number: 3 (lower is better)
Translates to: PTPRTLQHWELH*VDGKDANSKQL
Trigger: CAGCTGCTTGGAGTTTGCGTCCTTCCCGTCCACCCAGTGCAGCTCCCAGTGCTGCAGTGTGCGTGGCGTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
3UTR CCA 72 bp CAGCAACCAGGGCTTGGAGACATCTTCGCACCATCCTaGGACTGGGCAGCGCCACCCCCTGGGTGCTCTTCT +
Preference number: 3 (lower is better)
Translates to: QQPGLGDIFAPS*DWAAPPPGCSS
Trigger: AGAAGAGCACCCAGGGGGTGGCGCTGCCCAGTCCCAGGATGGTGCGAAGATGTCTCCAAGCCCTGGTTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR TCA 72 bp CGATCTGTAGTCTGTAGCTTCGGGAGGACAAGCAGGTaGGGAGCACGCAGAGCGCGTGGAAGGTGGCCAGCC +
Preference number: 3 (lower is better)
Translates to: RSVVCSFGRTSR*GARRARGRWPA
Trigger: GGCTGGCCACCTTCCACGCGCTCTGCGTGCTCCTCACCTGCTTGTCCTCCCGAAGCTACAGACTACAGATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432667.5
3UTR GCA 72 bp TCTGTGATGCGGCTGACCCAGGCACACAGGATTTTATaGATCACCCCGGGCTCCACAGGAGAAGCCAGGAGC +
Preference number: 3 (lower is better)
Translates to: SVMRLTQAHRIL*ITPGSTGEARS
Trigger: GCTCCTGGCTTCTCCTGTGGAGCCCGGGGTGATGCATAAAATCCTGTGTGCCTGGGTCAGCCGCATCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CAA 90 bp ACCCCGGGCTCCACAGGAGAAGCCAGGAGCACCACCCCCTCCAGTGACAACCAGTTTCATGTCAAGTCATaGTCTGTGATGCGGCTGACC +
Preference number: 3 (lower is better)
Translates to: TPGSTGEARSTTPSSDNQFHVKS*SVMRLT
Trigger: GGTCAGCCGCATCACAGACAATGACTTGACATGAAA...CTGGTTGTCACTGGAGGGGGTGGTGCTCCTGGCTTCTCCTGTGGAGCCCGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR TCA 72 bp CTCCACAGGAGAAGCCAGGAGCACCACCCCCTCCAGTaGCAACCAGGTGTCTCCAAACTTTGCCCCATGTCT +
Preference number: 3 (lower is better)
Translates to: LHRRSQEHHPLQ*QPGVSKLCPMS
Trigger: AGACATGGGGCAAAGTTTGGAGACACCTGGTTGTCACTGGAGGGGGTGGTGCTCCTGGCTTCTCCTGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR TCA 72 bp GCCACAAAGGCCCGAGAGGGGCATGAACTTGGCTGGTaGGCTCTGCACCTCAACATTCTCTTCCCAGGCTTG +
Preference number: 3 (lower is better)
Translates to: ATKAREGHELGW*ALHLNILFPGL
Trigger: CAAGCCTGGGAAGAGAATGTTGAGGTGCAGAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCCTTTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CAA 90 bp CCCACTTCTCAGCCACAAAGGCCCGAGAGGGGCATGAACTTGGCTGGTGAGCTCACTTTGCCCCATGTCTaGGAAGGTGAAAACACCCTC +
Preference number: 3 (lower is better)
Translates to: PTSQPQRPERGMNLAGELTLPHV*EGENTL
Trigger: GAGGGTGTTTTCACCTTCCAAGACATGGGGCAAAGT...GAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCCTTTGTGGCTGAGAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR TCA 72 bp GTCCCACTTCTCAGCCACAAAGGCCCGAGAGGGGCATaGACTTGGCTGGTGAGCTCTGCACCTCAACATTCT +
Preference number: 3 (lower is better)
Translates to: VPLLSHKGPRGA*TWLVSSAPQHS
Trigger: AGAATGTTGAGGTGCAGAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCCTTTGTGGCTGAGAAGTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR TCA 72 bp TCGGAGGAAGAGGAGCTAGAAAGCTTACCAGGCCGATaGGGATGCTTGCTGTCAACTGTTCCAGCCCCACTC +
Preference number: 3 (lower is better)
Translates to: SEEEELESLPGR*GCLLSTVPAPL
Trigger: GAGTGGGGCTGGAACAGTTGACAGCAAGCATCCTCATCGGCCTGGTAAGCTTTCTAGCTCCTCTTCCTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR GCA 72 bp AGGCCCGAGAGGGGCATGAACTTGGCTGGTGAGCTCTaGACCTCAACATTCTCTTCCCAGGCTTGTCTAATC +
Preference number: 3 (lower is better)
Translates to: RPERGMNLAGEL*TSTFSSQACLI
Trigger: GATTAGACAAGCCTGGGAAGAGAATGTTGAGGTGCAGAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR CCA 72 bp GTTCCTTTCAGGGCCTGTGCCAGTCAGCGCCTCCCCTaGCATAGGTCTTGTGCAATTTCTAATGACAGCATG +
Preference number: 3 (lower is better)
Translates to: VPFRACASQRLP*HRSCAISNDSM
Trigger: CATGCTGTCATTAGAAATTGCACAAGACCTATGCCAGGGGAGGCGCTGACTGGCACAGGCCCTGAAAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR CCA 72 bp TTTTCACGGTTCTTCTCCGAGGGTCACTTGTCAGCTTaGGAGGAGGTGGAACCTCAGCTCTTCACAGTTCCT +
Preference number: 3 (lower is better)
Translates to: FSRFFSEGHLSA*EEVEPQLFTVP
Trigger: AGGAACTGTGAAGAGCTGAGGTTCCACCTCCTCCCAAGCTGACAAGTGACCCTCGGAGAAGAACCGTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR TCA 72 bp CAGGTGTCTCCAAACTTTGCCCCATGTCTTGGAAGGTaGAAACACCCTCTACTGCGAACTGTGGCATGCACT +
Preference number: 3 (lower is better)
Translates to: QVSPNFAPCLGR*KHPLLRTVACT
Trigger: AGTGCATGCCACAGTTCGCAGTAGAGGGTGTTTTCACCTTCCAAGACATGGGGCAAAGTTTGGAGACACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR GCA 72 bp GCACCTGAAGACGCATGTCCTGATGGATACATTCAGTaGTGGCTGAAAAGCCAACTTCAGTGTGTGCCCTAC +
Preference number: 3 (lower is better)
Translates to: APEDACPDGYIQ*WLKSQLQCVPY
Trigger: GTAGGGCACACACTGAAGTTGGCTTTTCAGCCAGCACTGAATGTATCCATCAGGACATGCGTCTTCAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR CCA 72 bp CCTGAAGACGCATGTCCTGATGGATACATTCAGTGCTaGCTGAAAAGCCAACTTCAGTGTGTGCCCTACCAC +
Preference number: 3 (lower is better)
Translates to: PEDACPDGYIQC*LKSQLQCVPYH
Trigger: GTGGTAGGGCACACACTGAAGTTGGCTTTTCAGCCAGCACTGAATGTATCCATCAGGACATGCGTCTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CAA 90 bp TCTAACTGTACAGGCCGCTGTGAAACTGGAACATCGGAGGAAGAGGAGCTAGAAACTTTGCCCCATGTCTaGGAAGGTGAAAACACCCTC +
Preference number: 3 (lower is better)
Translates to: SNCTGRCETGTSEEEELETLPHV*EGENTL
Trigger: GAGGGTGTTTTCACCTTCCAAGACATGGGGCAAAGT...TTCTAGCTCCTCTTCCTCCGATGTTCCAGTTTCACAGCGGCCTGTACAGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR-3UTR CAA 90 bp CCAGGTGTCTCCAAACTTTGCCCCATGTCTTGGAAGGTGAAAACACCCTCTACTAGGTGTCTCCAAACTTaGCCCCATGTCTTGGAAGGT +
Preference number: 3 (lower is better)
Translates to: PGVSKLCPMSWKVKTPSTRCLQT*PHVLEG
Trigger: ACCTTCCAAGACATGGGGCAAAGTTTGGAGACACCT...AGTAGAGGGTGTTTTCACCTTCCAAGACATGGGGCAAAGTTTGGAGACACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CAA 90 bp ACGTATTTTCCAAGAGCTTCCTTCCAAGGTCTCTCTGCCCCAGCACAGCTGACATTTCATGTCAAGTCATaGTCTGTGATGCGGCTGACC +
Preference number: 3 (lower is better)
Translates to: TYFPRASFQGLSAPAQLTFHVKS*SVMRLT
Trigger: GGTCAGCCGCATCACAGACAATGACTTGACATGAAA...TGTCAGCTGTGCTGGGGCAGAGAGACCTTGGAAGGAAGCTCTTGGAAAATACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CAA 90 bp AGCCCCATGAGCCAGGGCTCAGTCCAGTCCGTCTGCAAGTATCCAGAGAGCATTAGGAAATTAAGACGATaGCTCAAAGAGATGCACTTG +
Preference number: 3 (lower is better)
Translates to: SPMSQGSVQSVCKYPESIRKLRR*LKEMHL
Trigger: CAAGTGCATCTCTTTGAGCAATCGTCTTAATTTCCT...AATGCTCTCTGGATACTTGCAGACGGACTGGACTGAGCCCTGGCTCATGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
3UTR TCA 72 bp AAGACGCATGTCCTGATGGATACATTCAGTGCTGGCTaGAAAGCCAACTTCAGTGTGTGCCCTACCACTGTG +
Preference number: 3 (lower is better)
Translates to: KTHVLMDTFSAG*KANFSVCPTTV
Trigger: CACAGTGGTAGGGCACACACTGAAGTTGGCTTTTCAGCCAGCACTGAATGTATCCATCAGGACATGCGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CAA 90 bp TCATGTCAAGTCATTGTCTGTGATGCGGCTGACCCAGGCACACAGGATTTTATGACTACAGGTCCACATTaGACAGGAACCAAGAGCCAC +
Preference number: 3 (lower is better)
Translates to: SCQVIVCDAADPGTQDFMTTGPH*TGTKSH
Trigger: GTGGCTCTTGGTTCCTGTCAAATGTGGACCTGTAGT...CATAAAATCCTGTGTGCCTGGGTCAGCCGCATCACAGACAATGACTTGACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CAA 90 bp CTCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCACCTTCTTCACAAGGCATGGGGATTACAATTaGAGATGCAATTTGGGTGGG +
Preference number: 3 (lower is better)
Translates to: LGKLTIMAEGETSTFFTRHGDYN*RCNLGG
Trigger: CCCACCCAAATTGCATCTCAAATTGTAATCCCCATG...CCTTGTGAAGAAGGTGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR-3UTR CAA 90 bp AAACACCCTCTACTGCGAACTGTGGCATGCACTAGAAAACACAGCACGAGGAGGAGGAAATTAAGACGATaGCTCAAAGAGATGCACTTG +
Preference number: 3 (lower is better)
Translates to: KHPLLRTVACTRKHSTRRRKLRR*LKEMHL
Trigger: CAAGTGCATCTCTTTGAGCAATCGTCTTAATTTCCT...CCTCCTCGTGCTGTGTTTTCTAGTGCATGCCACAGTTCGCAGTAGAGGGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432667.5
3UTR-3UTR CAA 90 bp CACCAGGACATTAGGAAAGACACGCTTCTCCATGGAGTGTTGACTTCAGGGCTTTTCCTTTCTTCTCTCTaGTGCATTCTTCAGGTCAGT +
Preference number: 3 (lower is better)
Translates to: HQDIRKDTLLHGVLTSGLFLSSL*CILQVS
Trigger: ACTGACCTGAAGAATGCACAAGAGAGAAGAAAGGAA...AAGCCCTGAAGTCAACACTCCATGGAGAAGCGTGTCTTTCCTAATGTCCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432667.5
3UTR GCA 72 bp GTGCTCTGTGCAACCCCCAGTGCTTTAAAGTGGGATTaGACCTGTGCTTTCGTAAATTACTCAACTGCTGAT +
Preference number: 3 (lower is better)
Translates to: VLCATPSALKWD*TCAFVNYSTAD
Trigger: ATCAGCAGTTGAGTAATTTACGAAAGCACAGGTGCAATCCCACTTTAAAGCACTGGGGGTTGCACAGAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR CCA 72 bp ACCAGTGTGCTCTGTGCAACCCCCAGTGCTTTAAAGTaGGATTGCACCTGTGCTTTCGTAAATTACTCAACT +
Preference number: 3 (lower is better)
Translates to: TSVLCATPSALK*DCTCAFVNYST
Trigger: AGTTGAGTAATTTACGAAAGCACAGGTGCAATCCCACTTTAAAGCACTGGGGGTTGCACAGAGCACACTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR TCA 72 bp AACCACAATGATCATGGCATTCACCAGCAGTGGGGCTaGAAATACTATAGAAATGAACATCCCCCTGGAGTC +
Preference number: 3 (lower is better)
Translates to: NHNDHGIHQQWG*KYYRNEHPPGV
Trigger: GACTCCAGGGGGATGTTCATTTCTATAGTATTTTCAGCCCCACTGCTGGTGAATGCCATGATCATTGTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432667.5
3UTR GCA 72 bp GGACTTCTTCAAATCAAATTCCCAGTTATGAAGCTCTaGAGAGACCGTTCCCACAGCCTGACTACAAAGATC +
Preference number: 3 (lower is better)
Translates to: GLLQIKFPVMKL*RDRSHSLTTKI
Trigger: GATCTTTGTAGTCAGGCTGTGGGAACGGTCTCTGCAGAGCTTCATAACTGGGAATTTGATTTGAAGAAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR TCA 72 bp GAAGGCTGCACTGAAAACATGTTCTGGTTAACTTGGTaGAAGAAGAAGGGTGCTCCACTGAAATCCAGACAA +
Preference number: 3 (lower is better)
Translates to: EGCTENMFWLTW*KKKGAPLKSRQ
Trigger: TTGTCTGGATTTCAGTGGAGCACCCTTCTTCTTTCACCAAGTTAACCAGAACATGTTTTCAGTGCAGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR TCA 72 bp CCTGGCATAGGTCTTGTGCAATTTCTAATGACAGCATaGTTCGGAGACTATAATAGCTACACCTTCCCCCAA +
Preference number: 3 (lower is better)
Translates to: PGIGLVQFLMTA*FGDYNSYTFPQ
Trigger: TTGGGGGAAGGTGTAGCTATTATAGTCTCCGAATCATGCTGTCATTAGAAATTGCACAAGACCTATGCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR TCA 72 bp ACACCAGCCACCCATCAGTGTGAACTAAGTAACAGGTaGAATCATAAGGATGGCACAATGTGTTTGTCGTTG +
Preference number: 3 (lower is better)
Translates to: TPATHQCELSNR*NHKDGTMCLSL
Trigger: CAACGACAAACACATTGTGCCATCCTTATGATTTCACCTGTTACTTAGTTCACACTGATGGGTGGCTGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR GCA 72 bp AAACATGTTCTGGTTAACTTGGTGAAAGAAGAAGGGTaGTCCACTGAAATCCAGACAAGGAAGCCTGAAGTT +
Preference number: 3 (lower is better)
Translates to: KHVLVNLVKEEG*STEIQTRKPEV
Trigger: AACTTCAGGCTTCCTTGTCTGGATTTCAGTGGAGCACCCTTCTTCTTTCACCAAGTTAACCAGAACATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR TCA 72 bp TGTCGTTGTAACTTGTTTAAACTAACTTCACTGTTGTaGGGTTTTCACGGTTCTTCTCCGAGGGTCACTTGT +
Preference number: 3 (lower is better)
Translates to: CRCNLFKLTSLL*GFHGSSPRVTC
Trigger: ACAAGTGACCCTCGGAGAAGAACCGTGAAAACCTCACAACAGTGAAGTTAGTTTAAACAAGTTACAACGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR CCA 72 bp ACTATAGAAATGAACATCCCCCTGGAGTCGAAATACTaGTATTTCGAAAATAATCTCCAGTTCATCGCAGCC +
Preference number: 3 (lower is better)
Translates to: TIEMNIPLESKY*YFENNLQFIAA
Trigger: GGCTGCGATGAACTGGAGATTATTTTCGAAATACCAGTATTTCGACTCCAGGGGGATGTTCATTTCTATAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432667.5
3UTR-3UTR CAA 90 bp TTACGTAAATTCAGCCTATACCCCTACAATGTGTTTACTATGCAGGCATTGAAAACAGAACTGGGAGCATaGTGTTCCCAAGCACCTAAA +
Preference number: 3 (lower is better)
Translates to: LRKFSLYPYNVFTMQALKTELGA*CSQAPK
Trigger: TTTAGGTGCTTGGGAACACAATGCTCCCAGTTCTGT...TTTCAATGCCTGCATAGTAAACACATTGTAGGGGTATAGGCTGAATTTACGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR CCA 72 bp CACACATGCAGAATGAAAATCAAAGACCACACGTCATaGTTTCACACTGACATGTCATCAGCATCAAATTCA +
Preference number: 3 (lower is better)
Translates to: HTCRMKIKDHTS*FHTDMSSASNS
Trigger: TGAATTTGATGCTGATGACATGTCAGTGTGAAACCATGACGTGTGGTCTTTGATTTTCATTCTGCATGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR GCA 72 bp TTTCCTTCTCCTTTTCTTTTCCTTTCTTCTCTCTTGTaGATTCTTCAGGTCAGTCATCACATTCAAAGTCTT +
Preference number: 3 (lower is better)
Translates to: FPSPFLFLSSLL*ILQVSHHIQSL
Trigger: AAGACTTTGAATGTGATGACTGACCTGAAGAATGCACAAGAGAGAAGAAAGGAAAAGAAAAGGAGAAGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432667.5
3UTR GCA 72 bp CAGAAATGCACAATTAGGCATGCTATCCAGATACAATaGACAATCAGTATTCCCTTATTGAACACCTATTTT +
Preference number: 3 (lower is better)
Translates to: QKCTIRHAIQIQ*TISIPLLNTYF
Trigger: AAAATAGGTGTTCAATAAGGGAATACTGATTGTGCATTGTATCTGGATAGCATGCCTAATTGTGCATTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR CCA 72 bp CAATTAGAAAAACTCTGCATCTCTAATATCAGTAACTaGTTACGTAAATTCAGCCTATACCCCTACAATGTG +
Preference number: 3 (lower is better)
Translates to: QLEKLCISNISN*LRKFSLYPYNV
Trigger: CACATTGTAGGGGTATAGGCTGAATTTACGTAACCAGTTACTGATATTAGAGATGCAGAGTTTTTCTAATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CCA 90 bp ACTGTTCCAGCCCCACTCGGAACAAGCTGCCACCAACGCATGGCACCCACAGCCGGCAGCGCCACCCCCTaGGTGCTCTTCTCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: TVPAPLGTSCHQRMAPTAGSATP*VLFSAL
Trigger: CAGGGCAGAGAAGAGCACCCAGGGGGTGGCGCTGCC...GGCTGTGGGTGCCATGCGTTGGTGGCAGCTTGTTCCGAGTGGGGCTGGAACAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR TCA 90 bp CAGCCACAAAGGCCCGAGAGGGGCATGAACTTGGCTGGTGAGCTCTGCACCTCAAGGTGGCCAGCCCCATaGGCCAGGGCTCAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: QPQRPERGMNLAGELCTSRWPAP*ARAQSS
Trigger: ACTGGACTGAGCCCTGGCTCATGGGGCTGGCCACCT...TGAGGTGCAGAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCCTTTGTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp CCCACTTCTCAGCCACAAAGGCCCGAGAGGGGCATGAACTTGGCTGGTGAGCTCGGGAGGACAAGCAGGTaGGGAGCACGCAGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: PTSQPQRPERGMNLAGELGRTSR*GARRAR
Trigger: ACGCGCTCTGCGTGCTCCTCACCTGCTTGTCCTCCC...GAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCCTTTGTGGCTGAGAAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp GAAGCCAGGAGCACCACCCCCTCCAGTGACAACCAGGTGTCTCCAAACTTTGCCGCGCCACCCCCTGGGTaGTCTTCTCTGCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: EARSTTPSSDNQVSPNFAAPPPG*SSLPWL
Trigger: GAGCCAGGGCAGAGAAGAGCACCCAGGGGGTGGCGC...GGCAAAGTTTGGAGACACCTGGTTGTCACTGGAGGGGGTGGTGCTCCTGGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR GCA 90 bp GGTGGCCAGCCCCATGAGCCAGGGCTCAGTCCAGTCCGTCTGCAAGTATCCAGAGAACTCTCCAGACAGTaGCGCACTCCGCCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GGQPHEPGLSPVRLQVSRELSRQ*RTPPPP
Trigger: AGGAGGCGGCGGAGTGCGGCACTGTCTGGAGAGTTC...TCTGGATACTTGCAGACGGACTGGACTGAGCCCTGGCTCATGGGGCTGGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
CDS-3UTR TCA 90 bp TCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCACTGGGGGAGGACAAGCAGGTaGGGAGCACGCAGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: SNHESAGRMPTPRTLQHWGRTSR*GARRAR
Trigger: ACGCGCTCTGCGTGCTCCTCACCTGCTTGTCCTCCC...CCAGTGCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
CDS-3UTR GCA 90 bp CGGCTGACCCAGGCACACAGGATTTTATGCATCACCCCGGGCTCCACAGGAGAACTCGCCGCCCCATCCTaGCTTCCCTGTGCAGCAACC +
Preference number: 4 (lower is better)
Translates to: RLTQAHRILCITPGSTGELAAPS*LPCAAT
Trigger: GGTTGCTGCACAGGGAAGGCAGGATGGGGCGGCGAG...TTCTCCTGTGGAGCCCGGGGTGATGCATAAAATCCTGTGTGCCTGGGTCAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CCA 90 bp CCCACTTCTCAGCCACAAAGGCCCGAGAGGGGCATGAACTTGGCTGGTGAGCTCCACTGGGAGCTGCACTaGGTGGACGGGAAGGACGCA +
Preference number: 4 (lower is better)
Translates to: PTSQPQRPERGMNLAGELHWELH*VDGKDA
Trigger: TGCGTCCTTCCCGTCCACCCAGTGCAGCTCCCAGTG...GAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCCTTTGTGGCTGAGAAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp CTGTGCAGCAACCAGGGCTTGGAGACATCTTCGCACCATCCTGGGACTGGGCAGAGGGCCCATGGAGGCTaGCATCCAGCTCGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: LCSNQGLETSSHHPGTGQRAHGG*HPARSD
Trigger: ATCTGAGCGAGCTGGATGTCAGCCTCCATGGGCCCT...CTGCCCAGTCCCAGGATGGTGCGAAGATGTCTCCAAGCCCTGGTTGCTGCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR TCA 90 bp GGTGGCCAGCCCCATGAGCCAGGGCTCAGTCCAGTCCGTCTGCAAGTATCCAGAGACCTCAGGGAATCTTaGGCCATCGCCACGTGCAAG +
Preference number: 4 (lower is better)
Translates to: GGQPHEPGLSPVRLQVSRDLRES*AIATCK
Trigger: CTTGCACGTGGCGATGGCTCAAGATTCCCTGAGGTC...TCTGGATACTTGCAGACGGACTGGACTGAGCCCTGGCTCATGGGGCTGGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
CDS-3UTR GCA 90 bp ACCCCGGGCTCCACAGGAGAAGCCAGGAGCACCACCCCCTCCAGTGACAACCAGCCAGTTATGAAGCTCTaGAGAGACCGTTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: TPGSTGEARSTTPSSDNQPVMKL*RDRSHS
Trigger: GCTGTGGGAACGGTCTCTGCAGAGCTTCATAACTGG...CTGGTTGTCACTGGAGGGGGTGGTGCTCCTGGCTTCTCCTGTGGAGCCCGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp CCGTCTGCAAGTATCCAGAGAGCATTGCCAGGCCTCAGAGAAACATGGGGACAGAGGTGGCCAGCCCCATaGGCCAGGGCTCAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: PSASIQRALPGLRETWGQRWPAP*ARAQSS
Trigger: ACTGGACTGAGCCCTGGCTCATGGGGCTGGCCACCT...CTGTCCCCATGTTTCTCTGAGGCCTGGCAATGCTCTCTGGATACTTGCAGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
CDS-3UTR TCA 90 bp ACCCCGGGCTCCACAGGAGAAGCCAGGAGCACCACCCCCTCCAGTGACAACCAGCTACAGGTCCACATTTaGCAGGAACCAAGAGCCACT +
Preference number: 4 (lower is better)
Translates to: TPGSTGEARSTTPSSDNQLQVHI*QEPRAT
Trigger: AGTGGCTCTTGGTTCCTGTCAAATGTGGACCTGTAG...CTGGTTGTCACTGGAGGGGGTGGTGCTCCTGGCTTCTCCTGTGGAGCCCGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp GCCGGGGAGGCCTCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCACCTCTCTGCTTGGCTGCCTaGAGGCTGCAGGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: AGEASGNLQSWQREKQAPLCLAA*RLQGAP
Trigger: AGGAGCTCCCTGCAGCCTTCAGGCAGCCAAGCAGAG...AGGTGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGAGGCCTCCCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR GCA 90 bp CCAGGAGCACCACCCCCTCCAGTGACAACCAGGTGTCTCCAAACTTTGCCCCATAGTCAGCTGGAAGGATaGCCACGCCACGCACACTGC +
Preference number: 4 (lower is better)
Translates to: PGAPPPPVTTRCLQTLPHSQLEG*PRHAHC
Trigger: GCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACT...ATGGGGCAAAGTTTGGAGACACCTGGTTGTCACTGGAGGGGGTGGTGCTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp CCGGGCTCCACAGGAGAAGCCAGGAGCACCACCCCCTCCAGTGACAACCAGGTGCTGCGAACTGTGGCATaGACTAGAAAACACAGCACG +
Preference number: 4 (lower is better)
Translates to: PGSTGEARSTTPSSDNQVLRTVA*TRKHST
Trigger: CGTGCTGTGTTTTCTAGTGCATGCCACAGTTCGCAG...CACCTGGTTGTCACTGGAGGGGGTGGTGCTCCTGGCTTCTCCTGTGGAGCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp ACCCCGGGCTCCACAGGAGAAGCCAGGAGCACCACCCCCTCCAGTGACAACCAGCTGTGCAACCCCCAGTaGTTTAAAGTGGGATTGCAC +
Preference number: 4 (lower is better)
Translates to: TPGSTGEARSTTPSSDNQLCNPQ*FKVGLH
Trigger: GTGCAATCCCACTTTAAAGCACTGGGGGTTGCACAG...CTGGTTGTCACTGGAGGGGGTGGTGCTCCTGGCTTCTCCTGTGGAGCCCGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR GCA 90 bp GAAGCCAGGAGCACCACCCCCTCCAGTGACAACCAGGTGTCTCCAAACTTTGCCGGCTCGCTCCCTTCCTaGCTCCGAGAACTCTGCATG +
Preference number: 4 (lower is better)
Translates to: EARSTTPSSDNQVSPNFAGSLPS*LRELCM
Trigger: CATGCAGAGTTCTCGGAGGCAGGAAGGGAGCGAGCC...GGCAAAGTTTGGAGACACCTGGTTGTCACTGGAGGGGGTGGTGCTCCTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR GCA 90 bp CCCACTTCTCAGCCACAAAGGCCCGAGAGGGGCATGAACTTGGCTGGTGAGCTCATCCTGCCTTCCCTGTaGAGCAACCAGGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: PTSQPQRPERGMNLAGELILPSL*SNQGLE
Trigger: CTCCAAGCCCTGGTTGCTGCACAGGGAAGGCAGGAT...GAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCCTTTGTGGCTGAGAAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR GCA 90 bp ATGGAGGGCCAAGCTGTGAGTGAGTTGGGCTTAGGGATCCATAAACCCAGAGATATGGCACCCACAGCCTaGGTGGGCCTCGCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: MEGQAVSELGLGIHKPRDMAPTA*VGLAAP
Trigger: TGGGGCGGCGAGGCCCACGCAGGCTGTGGGTGCCAT...ATCTCTGGGTTTATGGATCCCTAAGCCCAACTCACTCACAGCTTGGCCCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR GCA 90 bp CATCCCACTCAACTTCGCGCCACTGAAGCTCCTTACCCTGAATTCCACCCCCAGAGGCCTCTGCTTGGCTaGCTGAAGGCTGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: HPTQLRATEAPYPEFHPQRPLLG*LKAAGS
Trigger: GCTCCCTGCAGCCTTCAGGCAGCCAAGCAGAGGCCT...CTGGGGGTGGAATTCAGGGTAAGGAGCTTCAGTGGCGCGAAGTTGAGTGGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CCA 90 bp TCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCACTGGGGGAGCTGCACTGGGTaGACGGGAAGGACGCAAACT +
Preference number: 4 (lower is better)
Translates to: SNHESAGRMPTPRTLQHWGSCTG*TGRTQT
Trigger: AGTTTGCGTCCTTCCCGTCCACCCAGTGCAGCTCCC...CCAGTGCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
CDS-3UTR CCA 90 bp CATGGCCGGGGAGGCCTCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCCACTGGGAGCTGCACTaGGTGGACGGGAAGGACGCA +
Preference number: 4 (lower is better)
Translates to: HGRGGLGKLTIMAEGETSHWELH*VDGKDA
Trigger: TGCGTCCTTCCCGTCCACCCAGTGCAGCTCCCAGTG...GCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGAGGCCTCCCCGGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp GAAGCCAGGAGCACCACCCCCTCCAGTGACAACCAGGTGTCTCCAAACTTTGCCACGAGGAGGAGGGCATaGTGCCCATGTACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: EARSTTPSSDNQVSPNFATRRRA*CPCTGG
Trigger: GCCACCTGTACATGGGCACCATGCCCTCCTCCTCGT...GGCAAAGTTTGGAGACACCTGGTTGTCACTGGAGGGGGTGGTGCTCCTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp CCAGGAGCACCACCCCCTCCAGTGACAACCAGGTGTCTCCAAACTTTGCCCCATACGAGGAGGAGGGCATaGTGCCCATGTACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PGAPPPPVTTRCLQTLPHTRRRA*CPCTGG
Trigger: GCCACCTGTACATGGGCACCATGCCCTCCTCCTCGT...ATGGGGCAAAGTTTGGAGACACCTGGTTGTCACTGGAGGGGGTGGTGCTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp AACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACGGCCACGTGGGGCGTaGGCTCCCCTGGGATCTGTC +
Preference number: 4 (lower is better)
Translates to: NNGFSNHESAGRMPTPRTRPRGA*APLGSV
Trigger: GACAGATCCCAGGGGAGCCCACGCCCCACGTGGCCG...TGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000405941.3
CDS-3UTR CCA 90 bp AACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACAGCCCATGTCACCCCTTaGCGGCCACGTGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: NNGFSNHESAGRMPTPRTAHVTP*RPRGAW
Trigger: CCACGCCCCACGTGGCCGCCAAGGGGTGACATGGGC...TGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000405941.3
CDS-3UTR TCA 90 bp ACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACAGGTGGCCAGCCCCATaGGCCAGGGCTCAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: TTVFQTMSQLEGCPRHAHRWPAP*ARAQSS
Trigger: ACTGGACTGAGCCCTGGCTCATGGGGCTGGCCACCT...GTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
CDS-3UTR GCA 90 bp GGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCCACGCCACGCACACTaGAGCACTGGGAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: GFSNHESAGRMPTPRTLQPRHAH*STGSCT
Trigger: AGTGCAGCTCCCAGTGCTGCAGTGTGCGTGGCGTGG...CTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
CDS-3UTR GCA 90 bp ACCCCGGGCTCCACAGGAGAAGCCAGGAGCACCACCCCCTCCAGTGACAACCAGGAGCTAAGTTCCAGGTaGTCCTGTTTCCAGTTACAG +
Preference number: 4 (lower is better)
Translates to: TPGSTGEARSTTPSSDNQELSSR*SCFQLQ
Trigger: CTGTAACTGGAAACAGGAGCACCTGGAACTTAGCTC...CTGGTTGTCACTGGAGGGGGTGGTGCTCCTGGCTTCTCCTGTGGAGCCCGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR GCA 90 bp ACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCCTGGGTGCTCTTCTCTaGCCTGGCTCGCTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: TVFQTMSQLEGCPRHAHCLGALL*PGSLPS
Trigger: GGAAGGGAGCGAGCCAGGGCAGAGAAGAGCACCCAG...GCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR GCA 90 bp TTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCACTCCAGACCCCATCGAGTaGCCATGTCACCCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: FQTMSQLEGCPRHAHCSTPDPIE*PCHPLA
Trigger: CGCCAAGGGGTGACATGGGCACTCGATGGGGTCTGG...AGTGCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405941.3
CDS-3UTR GCA 90 bp CGTCTGCAAGTATCCAGAGAGCATTGCCAGGCCTCAGAGAAACATGGGGACAGGGAACTCTCCAGACAGTaGCGCACTCCGCCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RLQVSREHCQASEKHGDRELSRQ*RTPPPP
Trigger: AGGAGGCGGCGGAGTGCGGCACTGTCTGGAGAGTTC...CCTGTCCCCATGTTTCTCTGAGGCCTGGCAATGCTCTCTGGATACTTGCAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
CDS-3UTR GCA 90 bp ACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACGACTCCCCGGGACCCTaGTGTACCGTGAGCACGGCT +
Preference number: 4 (lower is better)
Translates to: TTVFQTMSQLEGCPRHAHDSPGP*CTVSTA
Trigger: AGCCGTGCTCACGGTACAGCAGGGTCCCGGGGAGTC...GTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR CCA 90 bp ACCCCGGGCTCCACAGGAGAAGCCAGGAGCACCACCCCCTCCAGTGACAACCAGCCCAGTGCTTTAAAGTaGGATTGCACCTGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: TPGSTGEARSTTPSSDNQPSALK*DCTCAF
Trigger: GAAAGCACAGGTGCAATCCCACTTTAAAGCACTGGG...CTGGTTGTCACTGGAGGGGGTGGTGCTCCTGGCTTCTCCTGTGGAGCCCGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CCA 90 bp CCTGACCGGTATATCTCTGACGGCAATTCTCGTCTGTCTTTAAGCATCCCACTCCACCCACAGCCTGCGTaGGCCTCGCCGCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: PDRYISDGNSRLSLSIPLHPQPA*ASPPHP
Trigger: AGGATGGGGCGGCGAGGCCCACGCAGGCTGTGGGTG...GAGTGGGATGCTTAAAGACAGACGAGAATTGCCGTCAGAGATATACCGGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR TCA 90 bp ACTGTTCCAGCCCCACTCGGAACAAGCTGCCACCAACGCATGGCACCCACAGCCTCGCAGCCGCCTCATTaGTGTATTCAGCACAGTAGA +
Preference number: 4 (lower is better)
Translates to: TVPAPLGTSCHQRMAPTASQPPH*CIQHSR
Trigger: TCTACTGTGCTGAATACATCAATGAGGCGGCTGCGA...GGCTGTGGGTGCCATGCGTTGGTGGCAGCTTGTTCCGAGTGGGGCTGGAACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR TCA 90 bp CGGCTGACCCAGGCACACAGGATTTTATGCATCACCCCGGGCTCCACAGGAGAACTGTACAGGCCGCTGTaGAACTGGAACATCGGAGGA +
Preference number: 4 (lower is better)
Translates to: RLTQAHRILCITPGSTGELYRPL*NWNIGG
Trigger: TCCTCCGATGTTCCAGTTTCACAGCGGCCTGTACAG...TTCTCCTGTGGAGCCCGGGGTGATGCATAAAATCCTGTGTGCCTGGGTCAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR TCA 90 bp ACCCCGGGCTCCACAGGAGAAGCCAGGAGCACCACCCCCTCCAGTGACAACCAGGGAAATGTAGGCATGTaGGGTTGGAGATTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: TPGSTGEARSTTPSSDNQGNVGM*GWRFLC
Trigger: ACACAGAAATCTCCAACCTCACATGCCTACATTTCC...CTGGTTGTCACTGGAGGGGGTGGTGCTCCTGGCTTCTCCTGTGGAGCCCGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR GCA 90 bp GGTGGCCAGCCCCATGAGCCAGGGCTCAGTCCAGTCCGTCTGCAAGTATCCAGACAAACTCCAAGCAGCTaGTGCCCCTCAGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GGQPHEPGLSPVRLQVSRQTPSS*CPSVFF
Trigger: AAAGAAGACTGAGGGGCAGCAGCTGCTTGGAGTTTG...TCTGGATACTTGCAGACGGACTGGACTGAGCCCTGGCTCATGGGGCTGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR GCA 90 bp CATCCCACTCAACTTCGCGCCACTGAAGCTCCTTACCCTGAATTCCACCCCCAGTGGCTGCCTGAAGGCTaGAGGGAGCTCCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: HPTQLRATEAPYPEFHPQWLPEG*RELLLC
Trigger: ACAGAGAAGGAGCTCCCTGCAGCCTTCAGGCAGCCA...CTGGGGGTGGAATTCAGGGTAAGGAGCTTCAGTGGCGCGAAGTTGAGTGGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CCA 90 bp TCCAGTCCGTCTGCAAGTATCCAGAGAGCATTGCCAGGCCTCAGAGAAACATGGCGGACGGCATGGTGTTaGGAAGCCCGCTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: SSPSASIQRALPGLRETWRTAWC*EARSHS
Trigger: GCTGTGAGAGCGGGCTTCCCAACACCATGCCGTCCG...CCATGTTTCTCTGAGGCCTGGCAATGCTCTCTGGATACTTGCAGACGGACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR CCA 90 bp TTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCACTACGAGGAGGAGGGCATaGTGCCCATGTACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: FQTMSQLEGCPRHAHCSTTRRRA*CPCTGG
Trigger: GCCACCTGTACATGGGCACCATGCCCTCCTCCTCGT...AGTGCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp ATACATTCAGTGCTGGCTGAAAAGCCAACTTCAGTGTGTGCCCTACCACTGTGGAGGTGGCCAGCCCCATaGGCCAGGGCTCAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: IHSVLAEKPTSVCALPLWRWPAP*ARAQSS
Trigger: ACTGGACTGAGCCCTGGCTCATGGGGCTGGCCACCT...CCACAGTGGTAGGGCACACACTGAAGTTGGCTTTTCAGCCAGCACTGAATGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp TCTCTCTGCCCCAGCACAGCTGACATTTCATGTCAAGTCATTGTCTGTGATGCGAGGTGGCCAGCCCCATaGGCCAGGGCTCAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SLCPSTADISCQVIVCDARWPAP*ARAQSS
Trigger: ACTGGACTGAGCCCTGGCTCATGGGGCTGGCCACCT...CGCATCACAGACAATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp TCTCTCTGCCCCAGCACAGCTGACATTTCATGTCAAGTCATTGTCTGTGATGCGGGGAGGACAAGCAGGTaGGGAGCACGCAGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: SLCPSTADISCQVIVCDAGRTSR*GARRAR
Trigger: ACGCGCTCTGCGTGCTCCTCACCTGCTTGTCCTCCC...CGCATCACAGACAATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp CCAGGTGTCTCCAAACTTTGCCCCATGTCTTGGAAGGTGAAAACACCCTCTACTGGGAGGACAAGCAGGTaGGGAGCACGCAGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: PGVSKLCPMSWKVKTPSTGRTSR*GARRAR
Trigger: ACGCGCTCTGCGTGCTCCTCACCTGCTTGTCCTCCC...AGTAGAGGGTGTTTTCACCTTCCAAGACATGGGGCAAAGTTTGGAGACACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp AACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACCACGCCACGCACACTaGAGCACTGGGAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: NNGFSNHESAGRMPTPRTPRHAH*STGSCT
Trigger: AGTGCAGCTCCCAGTGCTGCAGTGTGCGTGGCGTGG...TGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
CDS-3UTR GCA 90 bp CCGGGCTCCACAGGAGAAGCCAGGAGCACCACCCCCTCCAGTGACAACCAGGTGGATGGATACATTCAGTaGTGGCTGAAAAGCCAACTT +
Preference number: 4 (lower is better)
Translates to: PGSTGEARSTTPSSDNQVDGYIQ*WLKSQL
Trigger: AAGTTGGCTTTTCAGCCAGCACTGAATGTATCCATC...CACCTGGTTGTCACTGGAGGGGGTGGTGCTCCTGGCTTCTCCTGTGGAGCCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp ACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGGAGGAGGGCATGGTaGCCATGTACAGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: TVFQTMSQLEGCPRHAHCRRRAW*PCTGGT
Trigger: AGTGCCACCTGTACATGGGCACCATGCCCTCCTCCT...GCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp CAGCCACAAAGGCCCGAGAGGGGCATGAACTTGGCTGGTGAGCTCTGCACCTCACTGCGAACTGTGGCATaGACTAGAAAACACAGCACG +
Preference number: 4 (lower is better)
Translates to: QPQRPERGMNLAGELCTSLRTVA*TRKHST
Trigger: CGTGCTGTGTTTTCTAGTGCATGCCACAGTTCGCAG...TGAGGTGCAGAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCCTTTGTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp CAGCCACAAAGGCCCGAGAGGGGCATGAACTTGGCTGGTGAGCTCTGCACCTCAGGTGTCTCCAAACTTTaGCCCATGTCTTGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: QPQRPERGMNLAGELCTSGVSKL*PMSWKV
Trigger: CACCTTCCAAGACATGGGGCAAAGTTTGGAGACACC...TGAGGTGCAGAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCCTTTGTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp CCCACTTCTCAGCCACAAAGGCCCGAGAGGGGCATGAACTTGGCTGGTGAGCTCAACGGCCCTGGACAATaGTACAGGGAGGACACATTA +
Preference number: 4 (lower is better)
Translates to: PTSQPQRPERGMNLAGELNGPGQ*YREDTL
Trigger: TAATGTGTCCTCCCTGTAGCATTGTCCAGGGCCGTT...GAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCCTTTGTGGCTGAGAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp TCCAGTCCGTCTGCAAGTATCCAGAGAGCATTGCCAGGCCTCAGAGAAACATGGGACTCCCCGGGACCCTaGTGTACCAGAAGACCAGAG +
Preference number: 4 (lower is better)
Translates to: SSPSASIQRALPGLRETWDSPGP*CTRRPE
Trigger: CTCTGGTCTTCTGGTACAGCAGGGTCCCGGGGAGTC...CCATGTTTCTCTGAGGCCTGGCAATGCTCTCTGGATACTTGCAGACGGACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418447.1
CDS-3UTR CCA 90 bp ACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACGGGAGCTGCACTGGGTaGACGGGAAGGACGCAAACT +
Preference number: 4 (lower is better)
Translates to: TTVFQTMSQLEGCPRHAHGSCTG*TGRTQT
Trigger: AGTTTGCGTCCTTCCCGTCCACCCAGTGCAGCTCCC...GTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
CDS-3UTR TCA 90 bp CCAGGAGCACCACCCCCTCCAGTGACAACCAGGTGTCTCCAAACTTTGCCCCATCGGTTTTTCAAACCATaGGTCAGCTGGAAGGATGCC +
Preference number: 4 (lower is better)
Translates to: PGAPPPPVTTRCLQTLPHRFFKP*VSWKDA
Trigger: GGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCG...ATGGGGCAAAGTTTGGAGACACCTGGTTGTCACTGGAGGGGGTGGTGCTCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp TTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCACTACCGTTCCCACAGCCTaGCTACAAAGATCAGGCACC +
Preference number: 4 (lower is better)
Translates to: FQTMSQLEGCPRHAHCSTTVPTA*LQRSGT
Trigger: GGTGCCTGATCTTTGTAGTCAGGCTGTGGGAACGGT...AGTGCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp GCTGACCCAGGCACACAGGATTTTATGCATCACCCCGGGCTCCACAGGAGAAGCCTACAGGTCCACATTTaGCAGGAACCAAGAGCCACT +
Preference number: 4 (lower is better)
Translates to: ADPGTQDFMHHPGLHRRSLQVHI*QEPRAT
Trigger: AGTGGCTCTTGGTTCCTGTCAAATGTGGACCTGTAG...GCTTCTCCTGTGGAGCCCGGGGTGATGCATAAAATCCTGTGTGCCTGGGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp CTGTGCAGCAACCAGGGCTTGGAGACATCTTCGCACCATCCTGGGACTGGGCAGAGGGGAAGGCTGCACTaGAAACATGTTCTGGTTAAC +
Preference number: 4 (lower is better)
Translates to: LCSNQGLETSSHHPGTGQRGRLH*KHVLVN
Trigger: GTTAACCAGAACATGTTTTCAGTGCAGCCTTCCCCT...CTGCCCAGTCCCAGGATGGTGCGAAGATGTCTCCAAGCCCTGGTTGCTGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR TCA 90 bp AGCCCCATGAGCCAGGGCTCAGTCCAGTCCGTCTGCAAGTATCCAGAGAGCATTCTCTCTGCAATACACTaGACTCTCCAGACAGTGCCG +
Preference number: 4 (lower is better)
Translates to: SPMSQGSVQSVCKYPESILSAIH*TLQTVP
Trigger: CGGCACTGTCTGGAGAGTTCAGTGTATTGCAGAGAG...AATGCTCTCTGGATACTTGCAGACGGACTGGACTGAGCCCTGGCTCATGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
CDS-3UTR GCA 90 bp CACCAGGACATTAGGAAAGACACGCTTCTCCATGGAGTGTTGACTTCAGGGCTTCCACGCCACGCACACTaGAGCACTGGGAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: HQDIRKDTLLHGVLTSGLPRHAH*STGSCT
Trigger: AGTGCAGCTCCCAGTGCTGCAGTGTGCGTGGCGTGG...AAGCCCTGAAGTCAACACTCCATGGAGAAGCGTGTCTTTCCTAATGTCCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp AAACACCCTCTACTGCGAACTGTGGCATGCACTAGAAAACACAGCACGAGGAGGAGTCAGCTGGAAGGATaGCCACGCCACGCACACTGC +
Preference number: 4 (lower is better)
Translates to: KHPLLRTVACTRKHSTRRSQLEG*PRHAHC
Trigger: GCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACT...CCTCCTCGTGCTGTGTTTTCTAGTGCATGCCACAGTTCGCAGTAGAGGGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp CCAGGAGCACCACCCCCTCCAGTGACAACCAGGTGTCTCCAAACTTTGCCCCATAACGGCCCTGGACAATaGTACAGGGAGGACACATTA +
Preference number: 4 (lower is better)
Translates to: PGAPPPPVTTRCLQTLPHNGPGQ*YREDTL
Trigger: TAATGTGTCCTCCCTGTAGCATTGTCCAGGGCCGTT...ATGGGGCAAAGTTTGGAGACACCTGGTTGTCACTGGAGGGGGTGGTGCTCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp TTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCACTGACCCTATGGCCACATaGTTGGACTTAGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: FQTMSQLEGCPRHAHCSTDPMAT*LDLGLC
Trigger: GCAGAGGCCTAAGTCCAAGCATGTGGCCATAGGGTC...AGTGCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR GCA 90 bp AAAACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCAGGGAGCACGGCTTTCTaGCCAGACCCCATCGAGTGC +
Preference number: 4 (lower is better)
Translates to: KTTVFQTMSQLEGCPRHAGSTAF*PDPIEC
Trigger: GCACTCGATGGGGTCTGGGCAGAAAGCCGTGCTCCC...TGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000405941.3
CDS-3UTR CCA 90 bp GGTGAAAACACCCTCTACTGCGAACTGTGGCATGCACTAGAAAACACAGCACGACGCACACTGCAGCACTaGGAGCTGCACTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: GENTLYCELWHALENTARRTLQH*ELHWVD
Trigger: GTCCACCCAGTGCAGCTCCCAGTGCTGCAGTGTGCG...TCGTGCTGTGTTTTCTAGTGCATGCCACAGTTCGCAGTAGAGGGTGTTTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp CACCAGGACATTAGGAAAGACACGCTTCTCCATGGAGTGTTGACTTCAGGGCTTCGCACACTGCAGCACTaGGAGCTGCACTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: HQDIRKDTLLHGVLTSGLRTLQH*ELHWVD
Trigger: GTCCACCCAGTGCAGCTCCCAGTGCTGCAGTGTGCG...AAGCCCTGAAGTCAACACTCCATGGAGAAGCGTGTCTTTCCTAATGTCCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp GGTGAAAACACCCTCTACTGCGAACTGTGGCATGCACTAGAAAACACAGCACGAATCTTCGCACCATCCTaGGACTGGGCAGCGCCACCC +
Preference number: 4 (lower is better)
Translates to: GENTLYCELWHALENTARIFAPS*DWAAPP
Trigger: GGGTGGCGCTGCCCAGTCCCAGGATGGTGCGAAGAT...TCGTGCTGTGTTTTCTAGTGCATGCCACAGTTCGCAGTAGAGGGTGTTTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR CAA 72 bp ACTTCTCAGCCACAAAGGCCCGAGAGGGGCATGAACTaGGCTGGTGAGCTCTGCACCTCAACATTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TSQPQRPERGMN*AGELCTSTFSS
Trigger: GGAAGAGAATGTTGAGGTGCAGAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCCTTTGTGGCTGAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp GCTGACCCAGGCACACAGGATTTTATGCATCACCCCGGGCTCCACAGGAGAAGCACATTCAGTGCTGGCTaGAAAGCCAACTTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: ADPGTQDFMHHPGLHRRSTFSAG*KANFSV
Trigger: CACACTGAAGTTGGCTTTTCAGCCAGCACTGAATGT...GCTTCTCCTGTGGAGCCCGGGGTGATGCATAAAATCCTGTGTGCCTGGGTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp TCATGTCAAGTCATTGTCTGTGATGCGGCTGACCCAGGCACACAGGATTTTATGGGCCCGAGAGGGGCATaGACTTGGCTGGTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SCQVIVCDAADPGTQDFMGPRGA*TWLVSS
Trigger: AGAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCC...CATAAAATCCTGTGTGCCTGGGTCAGCCGCATCACAGACAATGACTTGACATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp TCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCACCTTCTTCACAAGGCGGCCCGAGAGGGGCATaGACTTGGCTGGTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SGNLQSWQREKQAPSSQGGPRGA*TWLVSS
Trigger: AGAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCC...GCCTTGTGAAGAAGGTGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp GGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGAGAAGGGTGCTCCACTaGAATCCAGACAAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GFSNHESAGRMPTPRTLQRRVLH*NPDKEA
Trigger: GGCTTCCTTGTCTGGATTTCAGTGGAGCACCCTTCT...CTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR GCA 90 bp GGTGACGACAAGGAAATTAAGACGATTGCTCAAAGAGATGCACTTGGCTCAGCCCCACGCCACGCACACTaGAGCACTGGGAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: GDDKEIKTIAQRDALGSAPRHAH*STGSCT
Trigger: AGTGCAGCTCCCAGTGCTGCAGTGTGCGTGGCGTGG...GGCTGAGCCAAGTGCATCTCTTTGAGCAATCGTCTTAATTTCCTTGTCGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR GCA 90 bp ACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCCCAGTTATGAAGCTCTaGAGAGACCGTTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: TVFQTMSQLEGCPRHAHCPVMKL*RDRSHS
Trigger: GCTGTGGGAACGGTCTCTGCAGAGCTTCATAACTGG...GCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp GCCGGGGAGGCCTCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCACCTGGTGTCTCCAAACTTTaGCCCATGTCTTGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: AGEASGNLQSWQREKQAPGVSKL*PMSWKV
Trigger: CACCTTCCAAGACATGGGGCAAAGTTTGGAGACACC...AGGTGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGAGGCCTCCCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp ACCCCGGGCTCCACAGGAGAAGCCAGGAGCACCACCCCCTCCAGTGACAACCAGGGTAACTTTCAGAAATaGACAATTAGGCATGCTATC +
Preference number: 4 (lower is better)
Translates to: TPGSTGEARSTTPSSDNQGNFQK*TIRHAI
Trigger: GATAGCATGCCTAATTGTGCATTTCTGAAAGTTACC...CTGGTTGTCACTGGAGGGGGTGGTGCTCCTGGCTTCTCCTGTGGAGCCCGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp ACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACAGCCTGAAACCAGTGTaGTCTGTGCAACCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: TTVFQTMSQLEGCPRHAHSLKPV*SVQPPV
Trigger: CACTGGGGGTTGCACAGAGCACACTGGTTTCAGGCT...GTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR GCA 90 bp CGGCTGACCCAGGCACACAGGATTTTATGCATCACCCCGGGCTCCACAGGAGAAGATTGCTCAAAGAGATaGACTTGGCTCAGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: RLTQAHRILCITPGSTGEDCSKR*TWLSPK
Trigger: TTTGGGGCTGAGCCAAGTGCATCTCTTTGAGCAATC...TTCTCCTGTGGAGCCCGGGGTGATGCATAAAATCCTGTGTGCCTGGGTCAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp CGGCTGACCCAGGCACACAGGATTTTATGCATCACCCCGGGCTCCACAGGAGAAGTATCCAGAGAGCATTaGCAGGCCTCAGAGAAACAT +
Preference number: 4 (lower is better)
Translates to: RLTQAHRILCITPGSTGEVSREH*QASEKH
Trigger: ATGTTTCTCTGAGGCCTGGCAATGCTCTCTGGATAC...TTCTCCTGTGGAGCCCGGGGTGATGCATAAAATCCTGTGTGCCTGGGTCAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp GAAGCCAGGAGCACCACCCCCTCCAGTGACAACCAGGTGTCTCCAAACTTTGCCGTATCCAGAGAGCATTaGCAGGCCTCAGAGAAACAT +
Preference number: 4 (lower is better)
Translates to: EARSTTPSSDNQVSPNFAVSREH*QASEKH
Trigger: ATGTTTCTCTGAGGCCTGGCAATGCTCTCTGGATAC...GGCAAAGTTTGGAGACACCTGGTTGTCACTGGAGGGGGTGGTGCTCCTGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp GTGGCCAGCCCCATGAGCCAGGGCTCAGTCCAGTCCGTCTGCAAGTATCCAGAGTTTCTCCAACCTCTCTaGAATACACTGAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: VASPMSQGSVQSVCKYPEFLQPL*NTLNSP
Trigger: TGGAGAGTTCAGTGTATTGCAGAGAGGTTGGAGAAA...CTCTGGATACTTGCAGACGGACTGGACTGAGCCCTGGCTCATGGGGCTGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
CDS-3UTR CCA 90 bp AGGTCTCTCTGCCCCAGCACAGCTGACATTTCATGTCAAGTCATTGTCTGTGATCGGACGGCATGGTGTTaGGAAGCCCGCTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: RSLCPSTADISCQVIVCDRTAWC*EARSHS
Trigger: GCTGTGAGAGCGGGCTTCCCAACACCATGCCGTCCG...ATCACAGACAATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAGAGAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281017.8
ENST00000432667.5
CDS-3UTR CCA 90 bp AAAACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACTGCGTGAGCACGGCTaGGATGCTGACGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: KTTVFQTMSQLEGCPRHALREHG*DADGER
Trigger: TCTTTCCCCGTCAGCATCCCAGCCGTGCTCACGCAG...TGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CCA 90 bp CGGCTGACCCAGGCACACAGGATTTTATGCATCACCCCGGGCTCCACAGGAGAACTTTGCCCCATGTCTTaGAAGGTGAAAACACCCTCT +
Preference number: 4 (lower is better)
Translates to: RLTQAHRILCITPGSTGELCPMS*KVKTPS
Trigger: AGAGGGTGTTTTCACCTTCCAAGACATGGGGCAAAG...TTCTCCTGTGGAGCCCGGGGTGATGCATAAAATCCTGTGTGCCTGGGTCAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp GGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGTCTACACAACGGCCCTaGACAATGCTACAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GFSNHESAGRMPTPRTLQSTQRP*TMLQGG
Trigger: TCCTCCCTGTAGCATTGTCCAGGGCCGTTGTGTAGA...CTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR CAA 72 bp GTTTTCACGGTTCTTCTCCGAGGGTCACTTGTCAGCTaGGGAGGAGGTGGAACCTCAGCTCTTCACAGTTCC +
Preference number: 4 (lower is better)
Translates to: VFTVLLRGSLVS*GGGGTSALHSS
Trigger: GGAACTGTGAAGAGCTGAGGTTCCACCTCCTCCCAAGCTGACAAGTGACCCTCGGAGAAGAACCGTGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR CAA 72 bp GTTGTGAGGTTTTCACGGTTCTTCTCCGAGGGTCACTaGTCAGCTTGGGAGGAGGTGGAACCTCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: VVRFSRFFSEGH*SAWEEVEPQLF
Trigger: GAAGAGCTGAGGTTCCACCTCCTCCCAAGCTGACAAGTGACCCTCGGAGAAGAACCGTGAAAACCTCACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR TCA 90 bp ACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCTCGCAGCCGCCTCATTaGTGTATTCAGCACAGTAGA +
Preference number: 4 (lower is better)
Translates to: TVFQTMSQLEGCPRHAHCSQPPH*CIQHSR
Trigger: TCTACTGTGCTGAATACATCAATGAGGCGGCTGCGA...GCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
CDS-3UTR TCA 90 bp GTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCCGGTTTTTCAAACCATaGGTCAGCTGGAAGGATGCC +
Preference number: 4 (lower is better)
Translates to: VFQTMSQLEGCPRHAHCSRFFKP*VSWKDA
Trigger: GGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCG...GCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
CDS-3UTR TCA 90 bp GGTGAAAACACCCTCTACTGCGAACTGTGGCATGCACTAGAAAACACAGCACGAGGGCCAAGCTGTGAGTaGGTTGGGCTTAGGGATCCA +
Preference number: 4 (lower is better)
Translates to: GENTLYCELWHALENTARGPSCE*VGLRDP
Trigger: TGGATCCCTAAGCCCAACTCACTCACAGCTTGGCCC...TCGTGCTGTGTTTTCTAGTGCATGCCACAGTTCGCAGTAGAGGGTGTTTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR TCA 90 bp GTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCCTCCTTAGTCAGCACTaGAGACCTCAGGGAATCTTG +
Preference number: 4 (lower is better)
Translates to: VFQTMSQLEGCPRHAHCSLLSQH*RPQGIL
Trigger: CAAGATTCCCTGAGGTCTTCAGTGCTGACTAAGGAG...GCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp GTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCCAAACTCCAAGCAGCTaGTGCCCCTCAGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VFQTMSQLEGCPRHAHCSQTPSS*CPSVFF
Trigger: AAAGAAGACTGAGGGGCAGCAGCTGCTTGGAGTTTG...GCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
CDS-3UTR GCA 90 bp TCATGTCAAGTCATTGTCTGTGATGCGGCTGACCCAGGCACACAGGATTTTATGAGTCAGCTGGAAGGATaGCCACGCCACGCACACTGC +
Preference number: 4 (lower is better)
Translates to: SCQVIVCDAADPGTQDFMSQLEG*PRHAHC
Trigger: GCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACT...CATAAAATCCTGTGTGCCTGGGTCAGCCGCATCACAGACAATGACTTGACATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp AAACACCCTCTACTGCGAACTGTGGCATGCACTAGAAAACACAGCACGAGGAGGTGCAGCAAAGGGACCTaGCAGCCAAAGGTGGAGCTA +
Preference number: 4 (lower is better)
Translates to: KHPLLRTVACTRKHSTRRCSKGT*QPKVEL
Trigger: TAGCTCCACCTTTGGCTGGCAGGTCCCTTTGCTGCA...CCTCCTCGTGCTGTGTTTTCTAGTGCATGCCACAGTTCGCAGTAGAGGGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR GCA 90 bp GGTCTCTCTGCCCCAGCACAGCTGACATTTCATGTCAAGTCATTGTCTGTGATGCTCAGCACCAGATGCTaGAGCAAAGGGACCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GLSAPAQLTFHVKSLSVMLSTRC*SKGTCQ
Trigger: CTGGCAGGTCCCTTTGCTGCAGCATCTGGTGCTGAG...CATCACAGACAATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAGAGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR GCA 90 bp CATCCCACTCAACTTCGCGCCACTGAAGCTCCTTACCCTGAATTCCACCCCCAGTTTCCAGGGAAAAGATaGTTGGGCCTGACCGGTATA +
Preference number: 4 (lower is better)
Translates to: HPTQLRATEAPYPEFHPQFPGKR*LGLTGI
Trigger: TATACCGGTCAGGCCCAAGCATCTTTTCCCTGGAAA...CTGGGGGTGGAATTCAGGGTAAGGAGCTTCAGTGGCGCGAAGTTGAGTGGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CCA 90 bp GGTGACGACAAGGAAATTAAGACGATTGCTCAAAGAGATGCACTTGGCTCAGCCGGGAGCTGCACTGGGTaGACGGGAAGGACGCAAACT +
Preference number: 4 (lower is better)
Translates to: GDDKEIKTIAQRDALGSAGSCTG*TGRTQT
Trigger: AGTTTGCGTCCTTCCCGTCCACCCAGTGCAGCTCCC...GGCTGAGCCAAGTGCATCTCTTTGAGCAATCGTCTTAATTTCCTTGTCGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR CCA 90 bp GCTGACCCAGGCACACAGGATTTTATGCATCACCCCGGGCTCCACAGGAGAAGCGGATACATTCAGTGCTaGCTGAAAAGCCAACTTCAG +
Preference number: 4 (lower is better)
Translates to: ADPGTQDFMHHPGLHRRSGYIQC*LKSQLQ
Trigger: CTGAAGTTGGCTTTTCAGCCAGCACTGAATGTATCC...GCTTCTCCTGTGGAGCCCGGGGTGATGCATAAAATCCTGTGTGCCTGGGTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp CTGTGCAGCAACCAGGGCTTGGAGACATCTTCGCACCATCCTGGGACTGGGCAGGGAAACTTACAATCATaGCAGAGGGAGAAACAAGCA +
Preference number: 4 (lower is better)
Translates to: LCSNQGLETSSHHPGTGQGNLQS*QREKQA
Trigger: TGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCC...CTGCCCAGTCCCAGGATGGTGCGAAGATGTCTCCAAGCCCTGGTTGCTGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CCA 90 bp CACGAGGAGGAGGGCATGGTGCCCATGTACAGGTGGCACTGTTTATTATTGAGTCCAGGACCGACTTGCTaGTGTAGTCGACCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: HEEEGMVPMYRWHCLLLSPGPTC*CSRPAR
Trigger: TCTTGCTGGTCGACTACACCAGCAAGTCGGTCCTGG...ACTCAATAATAAACAGTGCCACCTGTACATGGGCACCATGCCCTCCTCCTCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR CAA 72 bp TCTGCCCCAGCACAGCTGACATTTCATGTCAAGTCATaGTCTGTGATGCGGCTGACCCAGGCACACAGGATT +
Preference number: 4 (lower is better)
Translates to: SAPAQLTFHVKS*SVMRLTQAHRI
Trigger: AATCCTGTGTGCCTGGGTCAGCCGCATCACAGACAATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR CAA 72 bp AAAGACCAGCACATGGAGGGCCAAGCTGTGAGTGAGTaGGGCTTAGGGATCCATAAACCCAGAGATGCAGAC +
Preference number: 4 (lower is better)
Translates to: KDQHMEGQAVSE*GLGIHKPRDAD
Trigger: GTCTGCATCTCTGGGTTTATGGATCCCTAAGCCCAACTCACTCACAGCTTGGCCCTCCATGTGCTGGTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR TCA 90 bp AGACCGTTCCCACAGCCTGACTACAAAGATCAGGCACCTGAAGACGCATGTCCTTCGCAGCCGCCTCATTaGTGTATTCAGCACAGTAGA +
Preference number: 4 (lower is better)
Translates to: RPFPQPDYKDQAPEDACPSQPPH*CIQHSR
Trigger: TCTACTGTGCTGAATACATCAATGAGGCGGCTGCGA...AGGACATGCGTCTTCAGGTGCCTGATCTTTGTAGTCAGGCTGTGGGAACGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp TCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCACTGGCACCAGCAGTGGGGCTaGAAATACTATAGAAATGAA +
Preference number: 4 (lower is better)
Translates to: SNHESAGRMPTPRTLQHWHQQWG*KYYRNE
Trigger: TTCATTTCTATAGTATTTTCAGCCCCACTGCTGGTG...CCAGTGCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
CDS-3UTR TCA 90 bp TTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCACTACATTCAGTGCTGGCTaGAAAGCCAACTTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: FQTMSQLEGCPRHAHCSTTFSAG*KANFSV
Trigger: CACACTGAAGTTGGCTTTTCAGCCAGCACTGAATGT...AGTGCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp GGGGAGGCCTCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCACCTTCTCTGCCCCAGCACAGCTaGCATTTCATGTCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: GEASGNLQSWQREKQAPSLPQHS*HFMSSH
Trigger: ATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAG...AGAAGGTGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGAGGCCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp ACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACCATGAACTTGGCTGGTaGGCTCTGCACCTCAACATT +
Preference number: 4 (lower is better)
Translates to: TTVFQTMSQLEGCPRHAHHELGW*ALHLNI
Trigger: AATGTTGAGGTGCAGAGCTCACCAGCCAAGTTCATG...GTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp AGACCGTTCCCACAGCCTGACTACAAAGATCAGGCACCTGAAGACGCATGTCCTCATGAACTTGGCTGGTaGGCTCTGCACCTCAACATT +
Preference number: 4 (lower is better)
Translates to: RPFPQPDYKDQAPEDACPHELGW*ALHLNI
Trigger: AATGTTGAGGTGCAGAGCTCACCAGCCAAGTTCATG...AGGACATGCGTCTTCAGGTGCCTGATCTTTGTAGTCAGGCTGTGGGAACGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp ACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCATCAGGTCCCTCCCTTaGCACATGGGGATTACAATT +
Preference number: 4 (lower is better)
Translates to: TVFQTMSQLEGCPRHAHCIRSLP*HMGITI
Trigger: AATTGTAATCCCCATGTGTCAAGGGAGGGACCTGAT...GCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp TCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCACTGGAACAAGAAGTTTAATTaGCTCAGTTCCACATGGCCG +
Preference number: 4 (lower is better)
Translates to: SNHESAGRMPTPRTLQHWNKKFN*LSSTWP
Trigger: CGGCCATGTGGAACTGAGTCAATTAAACTTCTTGTT...CCAGTGCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp CCAGGAGCACCACCCCCTCCAGTGACAACCAGGTGTCTCCAAACTTTGCCCCATAACAAGAAGTTTAATTaGCTCAGTTCCACATGGCCG +
Preference number: 4 (lower is better)
Translates to: PGAPPPPVTTRCLQTLPHNKKFN*LSSTWP
Trigger: CGGCCATGTGGAACTGAGTCAATTAAACTTCTTGTT...ATGGGGCAAAGTTTGGAGACACCTGGTTGTCACTGGAGGGGGTGGTGCTCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp CTGTGCAGCAACCAGGGCTTGGAGACATCTTCGCACCATCCTGGGACTGGGCAGTTTTACCTGGATGCTTaGGCAAAAGGATATTCGGTT +
Preference number: 4 (lower is better)
Translates to: LCSNQGLETSSHHPGTGQFYLDA*AKGYSV
Trigger: AACCGAATATCCTTTTGCTCAAGCATCCAGGTAAAA...CTGCCCAGTCCCAGGATGGTGCGAAGATGTCTCCAAGCCCTGGTTGCTGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR TCA 90 bp TCCAGTCCGTCTGCAAGTATCCAGAGAGCATTGCCAGGCCTCAGAGAAACATGGGCCACGTGCAAGACTTaGTTTTCTCCAACCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SSPSASIQRALPGLRETWATCKT*FSPTSL
Trigger: CAGAGAGGTTGGAGAAAATCAAGTCTTGCACGTGGC...CCATGTTTCTCTGAGGCCTGGCAATGCTCTCTGGATACTTGCAGACGGACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
CDS-3UTR GCA 90 bp GGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGGCCAACTTCAGTGTGTaGCCTACCACTGTGGATATT +
Preference number: 4 (lower is better)
Translates to: GFSNHESAGRMPTPRTLQANFSV*PTTVDI
Trigger: AATATCCACAGTGGTAGGGCACACACTGAAGTTGGC...CTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp CCAGGAGCACCACCCCCTCCAGTGACAACCAGGTGTCTCCAAACTTTGCCCCATGATGGATACATTCAGTaGTGGCTGAAAAGCCAACTT +
Preference number: 4 (lower is better)
Translates to: PGAPPPPVTTRCLQTLPHDGYIQ*WLKSQL
Trigger: AAGTTGGCTTTTCAGCCAGCACTGAATGTATCCATC...ATGGGGCAAAGTTTGGAGACACCTGGTTGTCACTGGAGGGGGTGGTGCTCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp AGACCGTTCCCACAGCCTGACTACAAAGATCAGGCACCTGAAGACGCATGTCCTTTGGCTGGTGAGCTCTaGACCTCAACATTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RPFPQPDYKDQAPEDACPLAGEL*TSTFSS
Trigger: GGAAGAGAATGTTGAGGTGCAGAGCTCACCAGCCAA...AGGACATGCGTCTTCAGGTGCCTGATCTTTGTAGTCAGGCTGTGGGAACGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp TCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCACTGGGTGCCCATGTACAGGTaGCACTGTTTATTATTGAGT +
Preference number: 4 (lower is better)
Translates to: SNHESAGRMPTPRTLQHWVPMYR*HCLLLS
Trigger: ACTCAATAATAAACAGTGCCACCTGTACATGGGCAC...CCAGTGCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp CCAGGAGCACCACCCCCTCCAGTGACAACCAGGTGTCTCCAAACTTTGCCCCATGTGCCCATGTACAGGTaGCACTGTTTATTATTGAGT +
Preference number: 4 (lower is better)
Translates to: PGAPPPPVTTRCLQTLPHVPMYR*HCLLLS
Trigger: ACTCAATAATAAACAGTGCCACCTGTACATGGGCAC...ATGGGGCAAAGTTTGGAGACACCTGGTTGTCACTGGAGGGGGTGGTGCTCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp AGACCGTTCCCACAGCCTGACTACAAAGATCAGGCACCTGAAGACGCATGTCCTAGACACGCTTCTCCATaGAGTGTTGACTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RPFPQPDYKDQAPEDACPRHASP*SVDFRA
Trigger: AGCCCTGAAGTCAACACTCCATGGAGAAGCGTGTCT...AGGACATGCGTCTTCAGGTGCCTGATCTTTGTAGTCAGGCTGTGGGAACGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp AAAACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCAGCAGCAACCAGGGCTTaGAGACATCTTCGCACCATC +
Preference number: 4 (lower is better)
Translates to: KTTVFQTMSQLEGCPRHAAATRA*RHLRTI
Trigger: GATGGTGCGAAGATGTCTCCAAGCCCTGGTTGCTGC...TGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CCA 90 bp CTGTGCAGCAACCAGGGCTTGGAGACATCTTCGCACCATCCTGGGACTGGGCAGAGGTGTCACAGTTCTTaGCAAGTAAATCCATTCCTA +
Preference number: 4 (lower is better)
Translates to: LCSNQGLETSSHHPGTGQRCHSS*QVNPFL
Trigger: TAGGAATGGATTTACTTGCCAAGAACTGTGACACCT...CTGCCCAGTCCCAGGATGGTGCGAAGATGTCTCCAAGCCCTGGTTGCTGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR TCA 90 bp GACAAGGAAATTAAGACGATTGCTCAAAGAGATGCACTTGGCTCAGCCCCAAAGGACCTCAGGGAATCTTaGGCCATCGCCACGTGCAAG +
Preference number: 4 (lower is better)
Translates to: DKEIKTIAQRDALGSAPKDLRES*AIATCK
Trigger: CTTGCACGTGGCGATGGCTCAAGATTCCCTGAGGTC...CTTTGGGGCTGAGCCAAGTGCATCTCTTTGAGCAATCGTCTTAATTTCCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
CDS-3UTR GCA 90 bp ACGACAAGGAAATTAAGACGATTGCTCAAAGAGATGCACTTGGCTCAGCCCCAAAGGAGGAGGGCATGGTaGCCATGTACAGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: TTRKLRRLLKEMHLAQPQRRRAW*PCTGGT
Trigger: AGTGCCACCTGTACATGGGCACCATGCCCTCCTCCT...TTGGGGCTGAGCCAAGTGCATCTCTTTGAGCAATCGTCTTAATTTCCTTGTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR GCA 90 bp TTAAATAAAACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCTGCCTCCGAGAACTCTaGATGTGGAGCCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: LNKTTVFQTMSQLEGCPRCLREL*MWSPAP
Trigger: CGGGGCTGGGCTCCACATGCAGAGTTCTCGGAGGCA...GCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGTTTTATTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR GCA 90 bp GAACTGAAGGCATCTCTGATGTGCTCCTTTCGTTTGTGGAACAGAATCATGTTTGGGAGCACGGCTTTCTaGCCAGACCCCATCGAGTGC +
Preference number: 4 (lower is better)
Translates to: ELKASLMCSFRLWNRIMFGSTAF*PDPIEC
Trigger: GCACTCGATGGGGTCTGGGCAGAAAGCCGTGCTCCC...AAACATGATTCTGTTCCACAAACGAAAGGAGCACATCAGAGATGCCTTCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418447.1
CDS-3UTR CCA 90 bp TTAAATAAAACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACTGGGAGCTGCACTaGGTGGACGGGAAGGACGCA +
Preference number: 4 (lower is better)
Translates to: LNKTTVFQTMSQLEGCPRHWELH*VDGKDA
Trigger: TGCGTCCTTCCCGTCCACCCAGTGCAGCTCCCAGTG...GCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGTTTTATTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
CDS-3UTR CCA 90 bp AGAGATGCACTTGGCTCAGCCCCAAAGGTAAAACATGAATCATCATTTCAGACTCACTGGGAGCTGCACTaGGTGGACGGGAAGGACGCA +
Preference number: 4 (lower is better)
Translates to: RDALGSAPKVKHESSFQTHWELH*VDGKDA
Trigger: TGCGTCCTTCCCGTCCACCCAGTGCAGCTCCCAGTG...AGTCTGAAATGATGATTCATGTTTTACCTTTGGGGCTGAGCCAAGTGCATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR CCA 90 bp GGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCTCTACTGCGAACTGTaGCATGCACTAGAAAACACA +
Preference number: 4 (lower is better)
Translates to: GFSNHESAGRMPTPRTLQLYCEL*HALENT
Trigger: TGTGTTTTCTAGTGCATGCCACAGTTCGCAGTAGAG...CTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp GTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCCTCTACTGCGAACTGTaGCATGCACTAGAAAACACA +
Preference number: 4 (lower is better)
Translates to: VFQTMSQLEGCPRHAHCSLYCEL*HALENT
Trigger: TGTGTTTTCTAGTGCATGCCACAGTTCGCAGTAGAG...GCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp ATGGAGGGCCAAGCTGTGAGTGAGTTGGGCTTAGGGATCCATAAACCCAGAGATAGACACGCTTCTCCATaGAGTGTTGACTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: MEGQAVSELGLGIHKPRDRHASP*SVDFRA
Trigger: AGCCCTGAAGTCAACACTCCATGGAGAAGCGTGTCT...ATCTCTGGGTTTATGGATCCCTAAGCCCAACTCACTCACAGCTTGGCCCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CCA 90 bp CACGAGGAGGAGGGCATGGTGCCCATGTACAGGTGGCACTGTTTATTATTGAGTAGACACGCTTCTCCATaGAGTGTTGACTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: HEEEGMVPMYRWHCLLLSRHASP*SVDFRA
Trigger: AGCCCTGAAGTCAACACTCCATGGAGAAGCGTGTCT...ACTCAATAATAAACAGTGCCACCTGTACATGGGCACCATGCCCTCCTCCTCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp GCCGGGGAGGCCTCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCACCTGGAAACTTACAATCATaGCAGAGGGAGAAACAAGCA +
Preference number: 4 (lower is better)
Translates to: AGEASGNLQSWQREKQAPGNLQS*QREKQA
Trigger: TGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCC...AGGTGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGAGGCCTCCCCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp GGTGAAAACACCCTCTACTGCGAACTGTGGCATGCACTAGAAAACACAGCACGAAGTCAGCGCCTCCCCTaGCATAGGTCTTGTGCAATT +
Preference number: 4 (lower is better)
Translates to: GENTLYCELWHALENTARSQRLP*HRSCAI
Trigger: AATTGCACAAGACCTATGCCAGGGGAGGCGCTGACT...TCGTGCTGTGTTTTCTAGTGCATGCCACAGTTCGCAGTAGAGGGTGTTTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CCA 90 bp TCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCACTGGAGAAATAACCAAACATaGGTAAGGCAGAGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: SNHESAGRMPTPRTLQHWRNNQT*VRQRKD
Trigger: GTCTTTCCTCTGCCTTACCCATGTTTGGTTATTTCT...CCAGTGCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CCA 90 bp CAAGGCAGCAGGAGAGAGACAGTGACAGCAGGGGAAACTGCTGTCTTTAAAACCAAGGAACCAGGAGGATaGAAACAGGATTCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: QGSRRETVTAGETAVFKTKEPGG*KQDSPL
Trigger: GAGGGGAGAATCCTGTTTCCATCCTCCTGGTTCCTT...GGTTTTAAAGACAGCAGTTTCCCCTGCTGTCACTGTCTCTCTCCTGCTGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355654.6
ENST00000432667.5
3UTR CAA 72 bp GTGACAACCAGGTGTCTCCAAACTTTGCCCCATGTCTaGGAAGGTGAAAACACCCTCTACTGCGAACTGTGG +
Preference number: 4 (lower is better)
Translates to: VTTRCLQTLPHV*EGENTLYCELW
Trigger: CCACAGTTCGCAGTAGAGGGTGTTTTCACCTTCCAAGACATGGGGCAAAGTTTGGAGACACCTGGTTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp TCTCTCTGCCCCAGCACAGCTGACATTTCATGTCAAGTCATTGTCTGTGATGCGCGGTTTTTCAAACCATaGGTCAGCTGGAAGGATGCC +
Preference number: 4 (lower is better)
Translates to: SLCPSTADISCQVIVCDARFFKP*VSWKDA
Trigger: GGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCG...CGCATCACAGACAATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp CAAGGCAGCAGGAGAGAGACAGTGACAGCAGGGGAAACTGCTGTCTTTAAAACCACATTCAGTGCTGGCTaGAAAGCCAACTTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: QGSRRETVTAGETAVFKTTFSAG*KANFSV
Trigger: CACACTGAAGTTGGCTTTTCAGCCAGCACTGAATGT...GGTTTTAAAGACAGCAGTTTCCCCTGCTGTCACTGTCTCTCTCCTGCTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp GGGGAGGCCTCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCACCTTCTTCAAATTCCCAGTTATaGAGCTCTGCAGAGACCGTT +
Preference number: 4 (lower is better)
Translates to: GEASGNLQSWQREKQAPSSNSQL*SSAETV
Trigger: AACGGTCTCTGCAGAGCTTCATAACTGGGAATTTGA...AGAAGGTGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGAGGCCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp GTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCGTCATGGTTTCACACTaGCATGTCATCAGCATCAAA +
Preference number: 4 (lower is better)
Translates to: VFQTMSQLEGCPRHAHCSVMVSH*HVISIK
Trigger: TTTGATGCTGATGACATGTCAGTGTGAAACCATGAC...GCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR TCA 90 bp CAAGGCAGCAGGAGAGAGACAGTGACAGCAGGGGAAACTGCTGTCTTTAAAACCCCAGACAAGGAAGCCTaGAGTTCTTTTCCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: QGSRRETVTAGETAVFKTPDKEA*SSFPGK
Trigger: TTTCCCTGGAAAAGAACTTCAGGCTTCCTTGTCTGG...GGTTTTAAAGACAGCAGTTTCCCCTGCTGTCACTGTCTCTCTCCTGCTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR TCA 90 bp CTCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCACCTTCTTCACAAGGAGCTTACCAGGCCGATaGGGATGCTTGCTGTCAACT +
Preference number: 4 (lower is better)
Translates to: LGKLTIMAEGETSTFFTRSLPGR*GCLLST
Trigger: AGTTGACAGCAAGCATCCTCATCGGCCTGGTAAGCT...CCTTGTGAAGAAGGTGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR GCA 90 bp TTAAATAAAACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCAGTCAGCTGGAAGGATaGCCACGCCACGCACACTGC +
Preference number: 4 (lower is better)
Translates to: LNKTTVFQTMSQLEGCPRSQLEG*PRHAHC
Trigger: GCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACT...GCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGTTTTATTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
CDS-3UTR GCA 90 bp TCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCACCTTCTTCACAAGGCCCAGTTATGAAGCTCTaGAGAGACCGTTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: SGNLQSWQREKQAPSSQGPVMKL*RDRSHS
Trigger: GCTGTGGGAACGGTCTCTGCAGAGCTTCATAACTGG...GCCTTGTGAAGAAGGTGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp AAAACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACTGCGAACTGTGGCATaGACTAGAAAACACAGCACG +
Preference number: 4 (lower is better)
Translates to: KTTVFQTMSQLEGCPRHALRTVA*TRKHST
Trigger: CGTGCTGTGTTTTCTAGTGCATGCCACAGTTCGCAG...TGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp GTCTTGGAAGGTGAAAACACCCTCTACTGCGAACTGTGGCATGCACTAGAAAACCTTCCAAGGTCTCTCTaGCCCAGCACAGCTGACATT +
Preference number: 4 (lower is better)
Translates to: VLEGENTLYCELWHALENLPRSL*PSTADI
Trigger: AATGTCAGCTGTGCTGGGGCAGAGAGACCTTGGAAG...GTTTTCTAGTGCATGCCACAGTTCGCAGTAGAGGGTGTTTTCACCTTCCAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp ATACATTCAGTGCTGGCTGAAAAGCCAACTTCAGTGTGTGCCCTACCACTGTGGTTGGCTGGTGAGCTCTaGACCTCAACATTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: IHSVLAEKPTSVCALPLWLAGEL*TSTFSS
Trigger: GGAAGAGAATGTTGAGGTGCAGAGCTCACCAGCCAA...CCACAGTGGTAGGGCACACACTGAAGTTGGCTTTTCAGCCAGCACTGAATGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp ATACATTCAGTGCTGGCTGAAAAGCCAACTTCAGTGTGTGCCCTACCACTGTGGAACGGCCCTGGACAATaGTACAGGGAGGACACATTA +
Preference number: 4 (lower is better)
Translates to: IHSVLAEKPTSVCALPLWNGPGQ*YREDTL
Trigger: TAATGTGTCCTCCCTGTAGCATTGTCCAGGGCCGTT...CCACAGTGGTAGGGCACACACTGAAGTTGGCTTTTCAGCCAGCACTGAATGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp TTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCACTGTGGGATTGCACCTGTaGTTTCGTAAATTACTCAAC +
Preference number: 4 (lower is better)
Translates to: FQTMSQLEGCPRHAHCSTVGLHL*FRKLLN
Trigger: GTTGAGTAATTTACGAAAGCACAGGTGCAATCCCAC...AGTGCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR GCA 90 bp ACGTATTTTCCAAGAGCTTCCTTCCAAGGTCTCTCTGCCCCAGCACAGCTGACAGATTGCTCAAAGAGATaGACTTGGCTCAGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: TYFPRASFQGLSAPAQLTDCSKR*TWLSPK
Trigger: TTTGGGGCTGAGCCAAGTGCATCTCTTTGAGCAATC...TGTCAGCTGTGCTGGGGCAGAGAGACCTTGGAAGGAAGCTCTTGGAAAATACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp AGACCGTTCCCACAGCCTGACTACAAAGATCAGGCACCTGAAGACGCATGTCCTAAGGCATCTCTGATGTaGTCCTTTCGTTTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: RPFPQPDYKDQAPEDACPKASLM*SFRLWN
Trigger: GTTCCACAAACGAAAGGAGCACATCAGAGATGCCTT...AGGACATGCGTCTTCAGGTGCCTGATCTTTGTAGTCAGGCTGTGGGAACGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp TTCAAAGTTCAAGCACACAGAACTGAAGGCATCTCTGATGTGCTCCTTTCGTTTAGAAGGCGGACGGCATaGTGTTGGGAAGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: FKVQAHRTEGISDVLLSFRRRTA*CWEARS
Trigger: AGAGCGGGCTTCCCAACACCATGCCGTCCGCCTTCT...AAACGAAAGGAGCACATCAGAGATGCCTTCAGTTCTGTGTGCTTGAACTTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR CCA 90 bp AGACCGTTCCCACAGCCTGACTACAAAGATCAGGCACCTGAAGACGCATGTCCTCCCTCCCTTGACACATaGGGATTACAATTTGAGATG +
Preference number: 4 (lower is better)
Translates to: RPFPQPDYKDQAPEDACPPSLDT*GLQFEM
Trigger: CATCTCAAATTGTAATCCCCATGTGTCAAGGGAGGG...AGGACATGCGTCTTCAGGTGCCTGATCTTTGTAGTCAGGCTGTGGGAACGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp GCCGGGGAGGCCTCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCACCTTTCCTAGGTAAACCATaGCTTCTGGCTTCAAATTCA +
Preference number: 4 (lower is better)
Translates to: AGEASGNLQSWQREKQAPFLGKP*LLASNS
Trigger: TGAATTTGAAGCCAGAAGCCATGGTTTACCTAGGAA...AGGTGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGAGGCCTCCCCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR TCA 90 bp AGGTCTCTCTGCCCCAGCACAGCTGACATTTCATGTCAAGTCATTGTCTGTGATTCGCAGCCGCCTCATTaGTGTATTCAGCACAGTAGA +
Preference number: 4 (lower is better)
Translates to: RSLCPSTADISCQVIVCDSQPPH*CIQHSR
Trigger: TCTACTGTGCTGAATACATCAATGAGGCGGCTGCGA...ATCACAGACAATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAGAGAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp ACGTATTTTCCAAGAGCTTCCTTCCAAGGTCTCTCTGCCCCAGCACAGCTGACATCAAATTCCCAGTTATaGAGCTCTGCAGAGACCGTT +
Preference number: 4 (lower is better)
Translates to: TYFPRASFQGLSAPAQLTSNSQL*SSAETV
Trigger: AACGGTCTCTGCAGAGCTTCATAACTGGGAATTTGA...TGTCAGCTGTGCTGGGGCAGAGAGACCTTGGAAGGAAGCTCTTGGAAAATACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp TCTCTCTGCCCCAGCACAGCTGACATTTCATGTCAAGTCATTGTCTGTGATGCGTTATCACAGGCAAACTaGGATTCAATCACACGGCCC +
Preference number: 4 (lower is better)
Translates to: SLCPSTADISCQVIVCDALSQAN*DSITRP
Trigger: GGGCCGTGTGATTGAATCTCAGTTTGCCTGTGATAA...CGCATCACAGACAATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR TCA 90 bp AGACCGTTCCCACAGCCTGACTACAAAGATCAGGCACCTGAAGACGCATGTCCTCACACACATGCAGAATaGAAATCAAAGACCACACGT +
Preference number: 4 (lower is better)
Translates to: RPFPQPDYKDQAPEDACPHTHAE*KSKTTR
Trigger: ACGTGTGGTCTTTGATTTTCATTCTGCATGTGTGTG...AGGACATGCGTCTTCAGGTGCCTGATCTTTGTAGTCAGGCTGTGGGAACGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR GCA 90 bp CACCAGGACATTAGGAAAGACACGCTTCTCCATGGAGTGTTGACTTCAGGGCTTGCCAACTTCAGTGTGTaGCCTACCACTGTGGATATT +
Preference number: 4 (lower is better)
Translates to: HQDIRKDTLLHGVLTSGLANFSV*PTTVDI
Trigger: AATATCCACAGTGGTAGGGCACACACTGAAGTTGGC...AAGCCCTGAAGTCAACACTCCATGGAGAAGCGTGTCTTTCCTAATGTCCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp AGACCGTTCCCACAGCCTGACTACAAAGATCAGGCACCTGAAGACGCATGTCCTGATGGATACATTCAGTaGTGGCTGAAAAGCCAACTT +
Preference number: 4 (lower is better)
Translates to: RPFPQPDYKDQAPEDACPDGYIQ*WLKSQL
Trigger: AAGTTGGCTTTTCAGCCAGCACTGAATGTATCCATC...AGGACATGCGTCTTCAGGTGCCTGATCTTTGTAGTCAGGCTGTGGGAACGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp AGGTCTCTCTGCCCCAGCACAGCTGACATTTCATGTCAAGTCATTGTCTGTGATTTGGCTGGTGAGCTCTaGACCTCAACATTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RSLCPSTADISCQVIVCDLAGEL*TSTFSS
Trigger: GGAAGAGAATGTTGAGGTGCAGAGCTCACCAGCCAA...ATCACAGACAATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAGAGAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp GAAGCTCTGCAGAGACCGTTCCCACAGCCTGACTACAAAGATCAGGCACCTGAAGTGCCCATGTACAGGTaGCACTGTTTATTATTGAGT +
Preference number: 4 (lower is better)
Translates to: EALQRPFPQPDYKDQAPEVPMYR*HCLLLS
Trigger: ACTCAATAATAAACAGTGCCACCTGTACATGGGCAC...TTCAGGTGCCTGATCTTTGTAGTCAGGCTGTGGGAACGGTCTCTGCAGAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp CCAGGTGTCTCCAAACTTTGCCCCATGTCTTGGAAGGTGAAAACACCCTCTACTCTTTGCCCCATGTCTTaGAAGGTGAAAACACCCTCT +
Preference number: 4 (lower is better)
Translates to: PGVSKLCPMSWKVKTPSTLCPMS*KVKTPS
Trigger: AGAGGGTGTTTTCACCTTCCAAGACATGGGGCAAAG...AGTAGAGGGTGTTTTCACCTTCCAAGACATGGGGCAAAGTTTGGAGACACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp ATACATTCAGTGCTGGCTGAAAAGCCAACTTCAGTGTGTGCCCTACCACTGTGGCTTTGCCCCATGTCTTaGAAGGTGAAAACACCCTCT +
Preference number: 4 (lower is better)
Translates to: IHSVLAEKPTSVCALPLWLCPMS*KVKTPS
Trigger: AGAGGGTGTTTTCACCTTCCAAGACATGGGGCAAAG...CCACAGTGGTAGGGCACACACTGAAGTTGGCTTTTCAGCCAGCACTGAATGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp CTTCAGTGTGTGCCCTACCACTGTGGATATTTAAATAAAACAACGGTTTTTCAAGGGCGTGGGCTCCCCTaGGATCTGTCAGACGAACCC +
Preference number: 4 (lower is better)
Translates to: LQCVPYHCGYLNKTTVFQGRGLP*DLSDEP
Trigger: GGGTTCGTCTGACAGATCCCAGGGGAGCCCACGCCC...TTGAAAAACCGTTGTTTTATTTAAATATCCACAGTGGTAGGGCACACACTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000405941.3
CDS-3UTR TCA 90 bp CACGAGGAGGAGGGCATGGTGCCCATGTACAGGTGGCACTGTTTATTATTGAGTCACCAGCAGTGGGGCTaGAAATACTATAGAAATGAA +
Preference number: 4 (lower is better)
Translates to: HEEEGMVPMYRWHCLLLSHQQWG*KYYRNE
Trigger: TTCATTTCTATAGTATTTTCAGCCCCACTGCTGGTG...ACTCAATAATAAACAGTGCCACCTGTACATGGGCACCATGCCCTCCTCCTCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp CTCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCACCTTCTTCACAAGGATCAGGTCCCTCCCTTaGCACATGGGGATTACAATT +
Preference number: 4 (lower is better)
Translates to: LGKLTIMAEGETSTFFTRIRSLP*HMGITI
Trigger: AATTGTAATCCCCATGTGTCAAGGGAGGGACCTGAT...CCTTGTGAAGAAGGTGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp AACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACAAACAAGAAGTTTAATTaGCTCAGTTCCACATGGCCG +
Preference number: 4 (lower is better)
Translates to: NNGFSNHESAGRMPTPRTNKKFN*LSSTWP
Trigger: CGGCCATGTGGAACTGAGTCAATTAAACTTCTTGTT...TGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp GTAACTTTCAGAAATGCACAATTAGGCATGCTATCCAGATACAATGCACAATCATGCAGCACTGGGAGCTaGACTGGGTGGACGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VTFRNAQLGMLSRYNAQSCSTGS*TGWTGR
Trigger: CCTTCCCGTCCACCCAGTGCAGCTCCCAGTGCTGCA...TGATTGTGCATTGTATCTGGATAGCATGCCTAATTGTGCATTTCTGAAAGTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp GAATTCAAAGTTCAAGCACACAGAACTGAAGGCATCTCTGATGTGCTCCTTTCGCTTCCAAGGTCTCTCTaGCCCAGCACAGCTGACATT +
Preference number: 4 (lower is better)
Translates to: EFKVQAHRTEGISDVLLSLPRSL*PSTADI
Trigger: AATGTCAGCTGTGCTGGGGCAGAGAGACCTTGGAAG...CGAAAGGAGCACATCAGAGATGCCTTCAGTTCTGTGTGCTTGAACTTTGAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR GCA 90 bp ACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCGCTATCCAGATACAATaGACAATCAGTATTCCCTTA +
Preference number: 4 (lower is better)
Translates to: TVFQTMSQLEGCPRHAHCAIQIQ*TISIPL
Trigger: TAAGGGAATACTGATTGTGCATTGTATCTGGATAGC...GCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp GTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCGGTAACTTTCAGAAATaGACAATTAGGCATGCTATC +
Preference number: 4 (lower is better)
Translates to: VFQTMSQLEGCPRHAHCSGNFQK*TIRHAI
Trigger: GATAGCATGCCTAATTGTGCATTTCTGAAAGTTACC...GCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp AGACCGTTCCCACAGCCTGACTACAAAGATCAGGCACCTGAAGACGCATGTCCTGATTACAATTTGAGATaGAATTTGGGTGGGGACACA +
Preference number: 4 (lower is better)
Translates to: RPFPQPDYKDQAPEDACPDYNLR*NLGGDT
Trigger: TGTGTCCCCACCCAAATTGCATCTCAAATTGTAATC...AGGACATGCGTCTTCAGGTGCCTGATCTTTGTAGTCAGGCTGTGGGAACGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp TCTCTCTGCCCCAGCACAGCTGACATTTCATGTCAAGTCATTGTCTGTGATGCGGTGAAAGAAGAAGGGTaGTCCACTGAAATCCAGACA +
Preference number: 4 (lower is better)
Translates to: SLCPSTADISCQVIVCDAVKEEG*STEIQT
Trigger: TGTCTGGATTTCAGTGGAGCACCCTTCTTCTTTCAC...CGCATCACAGACAATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CCA 90 bp TCTCTCTGCCCCAGCACAGCTGACATTTCATGTCAAGTCATTGTCTGTGATGCGGGATACATTCAGTGCTaGCTGAAAAGCCAACTTCAG +
Preference number: 4 (lower is better)
Translates to: SLCPSTADISCQVIVCDAGYIQC*LKSQLQ
Trigger: CTGAAGTTGGCTTTTCAGCCAGCACTGAATGTATCC...CGCATCACAGACAATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp GACAAGGAAATTAAGACGATTGCTCAAAGAGATGCACTTGGCTCAGCCCCAAAGAAGGAACCAGGAGGATaGAAACAGGATTCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: DKEIKTIAQRDALGSAPKKEPGG*KQDSPL
Trigger: GAGGGGAGAATCCTGTTTCCATCCTCCTGGTTCCTT...CTTTGGGGCTGAGCCAAGTGCATCTCTTTGAGCAATCGTCTTAATTTCCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
CDS-3UTR TCA 90 bp GAATTCAAAGTTCAAGCACACAGAACTGAAGGCATCTCTGATGTGCTCCTTTCGCGGTTTTTCAAACCATaGGTCAGCTGGAAGGATGCC +
Preference number: 4 (lower is better)
Translates to: EFKVQAHRTEGISDVLLSRFFKP*VSWKDA
Trigger: GGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCG...CGAAAGGAGCACATCAGAGATGCCTTCAGTTCTGTGTGCTTGAACTTTGAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR TCA 90 bp TCATGTCAAGTCATTGTCTGTGATGCGGCTGACCCAGGCACACAGGATTTTATGTTCTGGTTAACTTGGTaGAAGAAGAAGGGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SCQVIVCDAADPGTQDFMFWLTW*KKKGAP
Trigger: TGGAGCACCCTTCTTCTTTCACCAAGTTAACCAGAA...CATAAAATCCTGTGTGCCTGGGTCAGCCGCATCACAGACAATGACTTGACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR TCA 90 bp ATACATTCAGTGCTGGCTGAAAAGCCAACTTCAGTGTGTGCCCTACCACTGTGGCTAACTTCACTGTTGTaGGGTTTTCACGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: IHSVLAEKPTSVCALPLWLTSLL*GFHGSS
Trigger: AGAAGAACCGTGAAAACCTCACAACAGTGAAGTTAG...CCACAGTGGTAGGGCACACACTGAAGTTGGCTTTTCAGCCAGCACTGAATGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR TCA 90 bp TTCAAAGTTCAAGCACACAGAACTGAAGGCATCTCTGATGTGCTCCTTTCGTTTCTCTCTGCAATACACTaGACTCTCCAGACAGTGCCG +
Preference number: 4 (lower is better)
Translates to: FKVQAHRTEGISDVLLSFLSAIH*TLQTVP
Trigger: CGGCACTGTCTGGAGAGTTCAGTGTATTGCAGAGAG...AAACGAAAGGAGCACATCAGAGATGCCTTCAGTTCTGTGTGCTTGAACTTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
CDS-3UTR GCA 90 bp GCATGCTATCCAGATACAATGCACAATCAGTATTCCCTTATTGAACACCTATTTCCACTCGGAACAAGCTaGCACCAACGCATGGCACCC +
Preference number: 4 (lower is better)
Translates to: ACYPDTMHNQYSLIEHLFPLGTS*HQRMAP
Trigger: GGGTGCCATGCGTTGGTGGCAGCTTGTTCCGAGTGG...AAATAGGTGTTCAATAAGGGAATACTGATTGTGCATTGTATCTGGATAGCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CCA 90 bp GTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCCTGGAGTCGAAATACTaGTATTTCGAAAATAATCTC +
Preference number: 4 (lower is better)
Translates to: VFQTMSQLEGCPRHAHCSLESKY*YFENNL
Trigger: GAGATTATTTTCGAAATACCAGTATTTCGACTCCAG...GCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
CDS-3UTR CCA 90 bp TTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCACTCTGGAGTCGAAATACTaGTATTTCGAAAATAATCTC +
Preference number: 4 (lower is better)
Translates to: FQTMSQLEGCPRHAHCSTLESKY*YFENNL
Trigger: GAGATTATTTTCGAAATACCAGTATTTCGACTCCAG...AGTGCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
CDS-3UTR CCA 90 bp GTAACTTTCAGAAATGCACAATTAGGCATGCTATCCAGATACAATGCACAATCAGGGAGCTGCACTGGGTaGACGGGAAGGACGCAAACT +
Preference number: 4 (lower is better)
Translates to: VTFRNAQLGMLSRYNAQSGSCTG*TGRTQT
Trigger: AGTTTGCGTCCTTCCCGTCCACCCAGTGCAGCTCCC...TGATTGTGCATTGTATCTGGATAGCATGCCTAATTGTGCATTTCTGAAAGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp TACCACTGTGGATATTTAAATAAAACAACGGTTTTTCAAACCATGAGTCAGCTGCGCACACTGCAGCACTaGGAGCTGCACTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: YHCGYLNKTTVFQTMSQLRTLQH*ELHWVD
Trigger: GTCCACCCAGTGCAGCTCCCAGTGCTGCAGTGTGCG...CAGCTGACTCATGGTTTGAAAAACCGTTGTTTTATTTAAATATCCACAGTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
CDS-3UTR CCA 90 bp TCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCACCTTCTTCACAAGGCAGTCATCCACATTTATaGAGCCTGAAACCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: SGNLQSWQREKQAPSSQGSHPHL*SLKPVC
Trigger: GCACACTGGTTTCAGGCTCCATAAATGTGGATGACT...GCCTTGTGAAGAAGGTGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CCA 90 bp ATGATGCTGCCTGGGTATTTCACAGGCATTTGTATAATAAATGAAATGAACTTGCGAGAACTCTGCATGTaGAGCCCAGCCCCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: MMLPGYFTGICIINEMNLRELCM*SPAPSS
Trigger: GGAGGACGGGGCTGGGCTCCACATGCAGAGTTCTCG...CAAGTTCATTTCATTTATTATACAAATGCCTGTGAAATACCCAGGCAGCATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CCA 90 bp AGGTCTCTCTGCCCCAGCACAGCTGACATTTCATGTCAAGTCATTGTCTGTGATAGCAATGATGCTGCCTaGGTATTTCACAGGCATTTG +
Preference number: 4 (lower is better)
Translates to: RSLCPSTADISCQVIVCDSNDAA*VFHRHL
Trigger: CAAATGCCTGTGAAATACCCAGGCAGCATCATTGCT...ATCACAGACAATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAGAGAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CCA 90 bp AGGTCTCTCTGCCCCAGCACAGCTGACATTTCATGTCAAGTCATTGTCTGTGATTCAAAGAGATGCACTTaGCTCAGCCCCAAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: RSLCPSTADISCQVIVCDSKRCT*LSPKGK
Trigger: TTTACCTTTGGGGCTGAGCCAAGTGCATCTCTTTGA...ATCACAGACAATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAGAGAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp CAGTGTGTGCCCTACCACTGTGGATATTTAAATAAAACAACGGTTTTTCAAACCACCGTTCCCACAGCCTaGCTACAAAGATCAGGCACC +
Preference number: 4 (lower is better)
Translates to: QCVPYHCGYLNKTTVFQTTVPTA*LQRSGT
Trigger: GGTGCCTGATCTTTGTAGTCAGGCTGTGGGAACGGT...GGTTTGAAAAACCGTTGTTTTATTTAAATATCCACAGTGGTAGGGCACACACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp AGAGATGCACTTGGCTCAGCCCCAAAGGTAAAACATGAATCATCATTTCAGACTCTACAGGTCCACATTTaGCAGGAACCAAGAGCCACT +
Preference number: 4 (lower is better)
Translates to: RDALGSAPKVKHESSFQTLQVHI*QEPRAT
Trigger: AGTGGCTCTTGGTTCCTGTCAAATGTGGACCTGTAG...AGTCTGAAATGATGATTCATGTTTTACCTTTGGGGCTGAGCCAAGTGCATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR TCA 90 bp TGTGGATATTTAAATAAAACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGGAGCAGGAGCTGCTaGAGGGTGTTTTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: CGYLNKTTVFQTMSQLEGWSRSC*RVFWPR
Trigger: CCTGGGCCAAAACACCCTTCAGCAGCTCCTGCTCCA...TCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGTTTTATTTAAATATCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR TCA 90 bp GAACTGAAGGCATCTCTGATGTGCTCCTTTCGTTTGTGGAACAGAATCATGTTTCTCCTTAGTCAGCACTaGAGACCTCAGGGAATCTTG +
Preference number: 4 (lower is better)
Translates to: ELKASLMCSFRLWNRIMFLLSQH*RPQGIL
Trigger: CAAGATTCCCTGAGGTCTTCAGTGCTGACTAAGGAG...AAACATGATTCTGTTCCACAAACGAAAGGAGCACATCAGAGATGCCTTCAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
CDS-3UTR GCA 90 bp CTTCAGTGTGTGCCCTACCACTGTGGATATTTAAATAAAACAACGGTTTTTCAAAGGAGGAGGGCATGGTaGCCATGTACAGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: LQCVPYHCGYLNKTTVFQRRRAW*PCTGGT
Trigger: AGTGCCACCTGTACATGGGCACCATGCCCTCCTCCT...TTGAAAAACCGTTGTTTTATTTAAATATCCACAGTGGTAGGGCACACACTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp AACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACAGCTATCCAGATACAATaGACAATCAGTATTCCCTTA +
Preference number: 4 (lower is better)
Translates to: NNGFSNHESAGRMPTPRTAIQIQ*TISIPL
Trigger: TAAGGGAATACTGATTGTGCATTGTATCTGGATAGC...TGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp CCAGGTGTCTCCAAACTTTGCCCCATGTCTTGGAAGGTGAAAACACCCTCTACTGATTACAATTTGAGATaGAATTTGGGTGGGGACACA +
Preference number: 4 (lower is better)
Translates to: PGVSKLCPMSWKVKTPSTDYNLR*NLGGDT
Trigger: TGTGTCCCCACCCAAATTGCATCTCAAATTGTAATC...AGTAGAGGGTGTTTTCACCTTCCAAGACATGGGGCAAAGTTTGGAGACACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp ATGATGCTGCCTGGGTATTTCACAGGCATTTGTATAATAAATGAAATGAACTTGAGAAGGCGGACGGCATaGTGTTGGGAAGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: MMLPGYFTGICIINEMNLRRRTA*CWEARS
Trigger: AGAGCGGGCTTCCCAACACCATGCCGTCCGCCTTCT...CAAGTTCATTTCATTTATTATACAAATGCCTGTGAAATACCCAGGCAGCATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CCA 90 bp GGGGAGGCCTCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCACCTTCTCTGGAGTCGAAATACTaGTATTTCGAAAATAATCTC +
Preference number: 4 (lower is better)
Translates to: GEASGNLQSWQREKQAPSLESKY*YFENNL
Trigger: GAGATTATTTTCGAAATACCAGTATTTCGACTCCAG...AGAAGGTGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGAGGCCTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp TCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCACCTTCTTCACAAGGCAAAGACCACACGTCATaGTTTCACACTGACATGTCA +
Preference number: 4 (lower is better)
Translates to: SGNLQSWQREKQAPSSQGKDHTS*FHTDMS
Trigger: TGACATGTCAGTGTGAAACCATGACGTGTGGTCTTT...GCCTTGTGAAGAAGGTGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR CAA 72 bp AGTAACAGTATGCCTGTCCTAACAGAACTGGGAGCATaGTGTTCCCAAGCACCTAAATCAACAGAACACCAG +
Preference number: 4 (lower is better)
Translates to: SNSMPVLTELGA*CSQAPKSTEHQ
Trigger: CTGGTGTTCTGTTGATTTAGGTGCTTGGGAACACAATGCTCCCAGTTCTGTTAGGACAGGCATACTGTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp ATACATTCAGTGCTGGCTGAAAAGCCAACTTCAGTGTGTGCCCTACCACTGTGGTTTCTAATGACAGCATaGTTCGGAGACTATAATAGC +
Preference number: 4 (lower is better)
Translates to: IHSVLAEKPTSVCALPLWFLMTA*FGDYNS
Trigger: GCTATTATAGTCTCCGAATCATGCTGTCATTAGAAA...CCACAGTGGTAGGGCACACACTGAAGTTGGCTTTTCAGCCAGCACTGAATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR TCA 90 bp TCAACATTCTCTTCCCAGGCTTGTCTAATCAAAGATAACTGTTCCAATTACATTGACCTCAGGGAATCTTaGGCCATCGCCACGTGCAAG +
Preference number: 4 (lower is better)
Translates to: STFSSQACLIKDNCSNYIDLRES*AIATCK
Trigger: CTTGCACGTGGCGATGGCTCAAGATTCCCTGAGGTC...AATGTAATTGGAACAGTTATCTTTGATTAGACAAGCCTGGGAAGAGAATGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp ATACATTCAGTGCTGGCTGAAAAGCCAACTTCAGTGTGTGCCCTACCACTGTGGGGTAACTTTCAGAAATaGACAATTAGGCATGCTATC +
Preference number: 4 (lower is better)
Translates to: IHSVLAEKPTSVCALPLWGNFQK*TIRHAI
Trigger: GATAGCATGCCTAATTGTGCATTTCTGAAAGTTACC...CCACAGTGGTAGGGCACACACTGAAGTTGGCTTTTCAGCCAGCACTGAATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp GTGACGACAAGGAAATTAAGACGATTGCTCAAAGAGATGCACTTGGCTCAGCCCGATTACAATTTGAGATaGAATTTGGGTGGGGACACA +
Preference number: 4 (lower is better)
Translates to: VTTRKLRRLLKEMHLAQPDYNLR*NLGGDT
Trigger: TGTGTCCCCACCCAAATTGCATCTCAAATTGTAATC...GGGCTGAGCCAAGTGCATCTCTTTGAGCAATCGTCTTAATTTCCTTGTCGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR GCA 90 bp AAACACCCTCTACTGCGAACTGTGGCATGCACTAGAAAACACAGCACGAGGAGGTCAGCATCAAATTCATaGAAAGCTAGCAATACTGTT +
Preference number: 4 (lower is better)
Translates to: KHPLLRTVACTRKHSTRRSASNS*KASNTV
Trigger: AACAGTATTGCTAGCTTTGCATGAATTTGATGCTGA...CCTCCTCGTGCTGTGTTTTCTAGTGCATGCCACAGTTCGCAGTAGAGGGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR GCA 90 bp TGTGGATATTTAAATAAAACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATCCCCAGGACCGACTTaGTGGTGTAGTCGACCAGCA +
Preference number: 4 (lower is better)
Translates to: CGYLNKTTVFQTMSQLEGSPGPT*WCSRPA
Trigger: TGCTGGTCGACTACACCAGCAAGTCGGTCCTGGGGA...TCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGTTTTATTTAAATATCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR GCA 90 bp GAACTGAAGGCATCTCTGATGTGCTCCTTTCGTTTGTGGAACAGAATCATGTTTGATTGCTCAAAGAGATaGACTTGGCTCAGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: ELKASLMCSFRLWNRIMFDCSKR*TWLSPK
Trigger: TTTGGGGCTGAGCCAAGTGCATCTCTTTGAGCAATC...AAACATGATTCTGTTCCACAAACGAAAGGAGCACATCAGAGATGCCTTCAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
CDS-3UTR GCA 90 bp AGAGATGCACTTGGCTCAGCCCCAAAGGTAAAACATGAATCATCATTTCAGACTGTATCCAGAGAGCATTaGCAGGCCTCAGAGAAACAT +
Preference number: 4 (lower is better)
Translates to: RDALGSAPKVKHESSFQTVSREH*QASEKH
Trigger: ATGTTTCTCTGAGGCCTGGCAATGCTCTCTGGATAC...AGTCTGAAATGATGATTCATGTTTTACCTTTGGGGCTGAGCCAAGTGCATCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
CDS-3UTR CCA 90 bp TACCACTGTGGATATTTAAATAAAACAACGGTTTTTCAAACCATGAGTCAGCTGTACCGTGAGCACGGCTaGGATGCTGACGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: YHCGYLNKTTVFQTMSQLYREHG*DADGER
Trigger: TCTTTCCCCGTCAGCATCCCAGCCGTGCTCACGGTA...CAGCTGACTCATGGTTTGAAAAACCGTTGTTTTATTTAAATATCCACAGTGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR TCA 90 bp TCAACATTCTCTTCCCAGGCTTGTCTAATCAAAGATAACTGTTCCAATTACATTACCGTTCCCACAGCCTaGCTACAAAGATCAGGCACC +
Preference number: 4 (lower is better)
Translates to: STFSSQACLIKDNCSNYITVPTA*LQRSGT
Trigger: GGTGCCTGATCTTTGTAGTCAGGCTGTGGGAACGGT...AATGTAATTGGAACAGTTATCTTTGATTAGACAAGCCTGGGAAGAGAATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp CAGTGTGTGCCCTACCACTGTGGATATTTAAATAAAACAACGGTTTTTCAAACCGCCACGTGCAAGACTTaGTTTTCTCCAACCTCTCTG +
Preference number: 4 (lower is better)
Translates to: QCVPYHCGYLNKTTVFQTATCKT*FSPTSL
Trigger: CAGAGAGGTTGGAGAAAATCAAGTCTTGCACGTGGC...GGTTTGAAAAACCGTTGTTTTATTTAAATATCCACAGTGGTAGGGCACACACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR GCA 90 bp CTTCAGTGTGTGCCCTACCACTGTGGATATTTAAATAAAACAACGGTTTTTCAACTTCCAAGGTCTCTCTaGCCCAGCACAGCTGACATT +
Preference number: 4 (lower is better)
Translates to: LQCVPYHCGYLNKTTVFQLPRSL*PSTADI
Trigger: AATGTCAGCTGTGCTGGGGCAGAGAGACCTTGGAAG...TTGAAAAACCGTTGTTTTATTTAAATATCCACAGTGGTAGGGCACACACTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp TCAACATTCTCTTCCCAGGCTTGTCTAATCAAAGATAACTGTTCCAATTACATTGCCGATGAGGATGCTTaGTGTCAACTGTTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: STFSSQACLIKDNCSNYIADEDA*CQLFQP
Trigger: GGGCTGGAACAGTTGACAGCAAGCATCCTCATCGGC...AATGTAATTGGAACAGTTATCTTTGATTAGACAAGCCTGGGAAGAGAATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR GCA 90 bp GAACTGAAGGCATCTCTGATGTGCTCCTTTCGTTTGTGGAACAGAATCATGTTTAAGGCATCTCTGATGTaGTCCTTTCGTTTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: ELKASLMCSFRLWNRIMFKASLM*SFRLWN
Trigger: GTTCCACAAACGAAAGGAGCACATCAGAGATGCCTT...AAACATGATTCTGTTCCACAAACGAAAGGAGCACATCAGAGATGCCTTCAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
CDS-3UTR GCA 90 bp AATTCAAAGTTCAAGCACACAGAACTGAAGGCATCTCTGATGTGCTCCTTTCGTAAGGCATCTCTGATGTaGTCCTTTCGTTTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: NSKFKHTELKASLMCSFRKASLM*SFRLWN
Trigger: GTTCCACAAACGAAAGGAGCACATCAGAGATGCCTT...ACGAAAGGAGCACATCAGAGATGCCTTCAGTTCTGTGTGCTTGAACTTTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
CDS-3UTR CCA 90 bp AATTCAAAGTTCAAGCACACAGAACTGAAGGCATCTCTGATGTGCTCCTTTCGTCTCTACTGCGAACTGTaGCATGCACTAGAAAACACA +
Preference number: 4 (lower is better)
Translates to: NSKFKHTELKASLMCSFRLYCEL*HALENT
Trigger: TGTGTTTTCTAGTGCATGCCACAGTTCGCAGTAGAG...ACGAAAGGAGCACATCAGAGATGCCTTCAGTTCTGTGTGCTTGAACTTTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR CCA 90 bp GTAACTTTCAGAAATGCACAATTAGGCATGCTATCCAGATACAATGCACAATCATCTACACAACGGCCCTaGACAATGCTACAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: VTFRNAQLGMLSRYNAQSSTQRP*TMLQGG
Trigger: TCCTCCCTGTAGCATTGTCCAGGGCCGTTGTGTAGA...TGATTGTGCATTGTATCTGGATAGCATGCCTAATTGTGCATTTCTGAAAGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp GAACTGAAGGCATCTCTGATGTGCTCCTTTCGTTTGTGGAACAGAATCATGTTTTCAAAGAGATGCACTTaGCTCAGCCCCAAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: ELKASLMCSFRLWNRIMFSKRCT*LSPKGK
Trigger: TTTACCTTTGGGGCTGAGCCAAGTGCATCTCTTTGA...AAACATGATTCTGTTCCACAAACGAAAGGAGCACATCAGAGATGCCTTCAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
CDS-3UTR TCA 90 bp GTAACTTTCAGAAATGCACAATTAGGCATGCTATCCAGATACAATGCACAATCACTGCCCCAGCACAGCTaGCATTTCATGTCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: VTFRNAQLGMLSRYNAQSLPQHS*HFMSSH
Trigger: ATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAG...TGATTGTGCATTGTATCTGGATAGCATGCCTAATTGTGCATTTCTGAAAGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp CAGTGTGTGCCCTACCACTGTGGATATTTAAATAAAACAACGGTTTTTCAAACCATCAGGTCCCTCCCTTaGCACATGGGGATTACAATT +
Preference number: 4 (lower is better)
Translates to: QCVPYHCGYLNKTTVFQTIRSLP*HMGITI
Trigger: AATTGTAATCCCCATGTGTCAAGGGAGGGACCTGAT...GGTTTGAAAAACCGTTGTTTTATTTAAATATCCACAGTGGTAGGGCACACACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp GCATGCTATCCAGATACAATGCACAATCAGTATTCCCTTATTGAACACCTATTTCAAACTCCAAGCAGCTaGTGCCCCTCAGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: ACYPDTMHNQYSLIEHLFQTPSS*CPSVFF
Trigger: AAAGAAGACTGAGGGGCAGCAGCTGCTTGGAGTTTG...AAATAGGTGTTCAATAAGGGAATACTGATTGTGCATTGTATCTGGATAGCATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp GCATGCTATCCAGATACAATGCACAATCAGTATTCCCTTATTGAACACCTATTTGGTGTCTCCAAACTTTaGCCCATGTCTTGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: ACYPDTMHNQYSLIEHLFGVSKL*PMSWKV
Trigger: CACCTTCCAAGACATGGGGCAAAGTTTGGAGACACC...AAATAGGTGTTCAATAAGGGAATACTGATTGTGCATTGTATCTGGATAGCATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp CTTCAGTGTGTGCCCTACCACTGTGGATATTTAAATAAAACAACGGTTTTTCAAAAGGAACCAGGAGGATaGAAACAGGATTCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: LQCVPYHCGYLNKTTVFQKEPGG*KQDSPL
Trigger: GAGGGGAGAATCCTGTTTCCATCCTCCTGGTTCCTT...TTGAAAAACCGTTGTTTTATTTAAATATCCACAGTGGTAGGGCACACACTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355654.6
ENST00000432667.5
3UTR CAA 72 bp GTAGACTTTCTTCTACTGGCAAGGACACAATTGCATTaGTTTGTTAAAACTCAGCACCAGATGCTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: VDFLLLARTQLH*FVKTQHQMLQQ
Trigger: TTGCTGCAGCATCTGGTGCTGAGTTTTAACAAACAAATGCAATTGTGTCCTTGCCAGTAGAAGAAAGTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR TCA 90 bp TGTGGATATTTAAATAAAACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGACTGCCCCAGCACAGCTaGCATTTCATGTCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: CGYLNKTTVFQTMSQLEGLPQHS*HFMSSH
Trigger: ATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAG...TCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGTTTTATTTAAATATCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp TGTGGATATTTAAATAAAACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGACATGAACTTGGCTGGTaGGCTCTGCACCTCAACATT +
Preference number: 4 (lower is better)
Translates to: CGYLNKTTVFQTMSQLEGHELGW*ALHLNI
Trigger: AATGTTGAGGTGCAGAGCTCACCAGCCAAGTTCATG...TCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGTTTTATTTAAATATCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp TCAACATTCTCTTCCCAGGCTTGTCTAATCAAAGATAACTGTTCCAATTACATTCTCCTTAGTCAGCACTaGAGACCTCAGGGAATCTTG +
Preference number: 4 (lower is better)
Translates to: STFSSQACLIKDNCSNYILLSQH*RPQGIL
Trigger: CAAGATTCCCTGAGGTCTTCAGTGCTGACTAAGGAG...AATGTAATTGGAACAGTTATCTTTGATTAGACAAGCCTGGGAAGAGAATGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp TGTGGATATTTAAATAAAACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGACAAACTCCAAGCAGCTaGTGCCCCTCAGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: CGYLNKTTVFQTMSQLEGQTPSS*CPSVFF
Trigger: AAAGAAGACTGAGGGGCAGCAGCTGCTTGGAGTTTG...TCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGTTTTATTTAAATATCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
CDS-3UTR TCA 90 bp TGCAACTATAATTCATGGAATTCAAAGTTCAAGCACACAGAACTGAAGGCATCTTCAAATTCCCAGTTATaGAGCTCTGCAGAGACCGTT +
Preference number: 4 (lower is better)
Translates to: CNYNSWNSKFKHTELKASSNSQL*SSAETV
Trigger: AACGGTCTCTGCAGAGCTTCATAACTGGGAATTTGA...AGATGCCTTCAGTTCTGTGTGCTTGAACTTTGAATTCCATGAATTATAGTTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR CCA 90 bp GTAACTTTCAGAAATGCACAATTAGGCATGCTATCCAGATACAATGCACAATCAGGATACATTCAGTGCTaGCTGAAAAGCCAACTTCAG +
Preference number: 4 (lower is better)
Translates to: VTFRNAQLGMLSRYNAQSGYIQC*LKSQLQ
Trigger: CTGAAGTTGGCTTTTCAGCCAGCACTGAATGTATCC...TGATTGTGCATTGTATCTGGATAGCATGCCTAATTGTGCATTTCTGAAAGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp GTAACTTTCAGAAATGCACAATTAGGCATGCTATCCAGATACAATGCACAATCACCCTCCCTTGACACATaGGGATTACAATTTGAGATG +
Preference number: 4 (lower is better)
Translates to: VTFRNAQLGMLSRYNAQSPSLDT*GLQFEM
Trigger: CATCTCAAATTGTAATCCCCATGTGTCAAGGGAGGG...TGATTGTGCATTGTATCTGGATAGCATGCCTAATTGTGCATTTCTGAAAGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
3UTR CAA 72 bp CATAACTTTGCTAGAGAGGGCCTAGCCTCTTGTGAATaGGTTCATCAAACTGAGATACAACGTATTTTCCAA +
Preference number: 4 (lower is better)
Translates to: HNFAREGLASCE*VHQTEIQRIFQ
Trigger: TTGGAAAATACGTTGTATCTCAGTTTGATGAACCAATTCACAAGAGGCTAGGCCCTCTCTAGCAAAGTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp GTAACTTTCAGAAATGCACAATTAGGCATGCTATCCAGATACAATGCACAATCACACCAGCAGTGGGGCTaGAAATACTATAGAAATGAA +
Preference number: 4 (lower is better)
Translates to: VTFRNAQLGMLSRYNAQSHQQWG*KYYRNE
Trigger: TTCATTTCTATAGTATTTTCAGCCCCACTGCTGGTG...TGATTGTGCATTGTATCTGGATAGCATGCCTAATTGTGCATTTCTGAAAGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR GCA 90 bp TGCAACTATAATTCATGGAATTCAAAGTTCAAGCACACAGAACTGAAGGCATCTTTTCTCCAACCTCTCTaGAATACACTGAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: CNYNSWNSKFKHTELKASFLQPL*NTLNSP
Trigger: TGGAGAGTTCAGTGTATTGCAGAGAGGTTGGAGAAA...AGATGCCTTCAGTTCTGTGTGCTTGAACTTTGAATTCCATGAATTATAGTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
CDS-3UTR CCA 90 bp TGTGGATATTTAAATAAAACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGACCCTCCCTTGACACATaGGGATTACAATTTGAGATG +
Preference number: 4 (lower is better)
Translates to: CGYLNKTTVFQTMSQLEGPSLDT*GLQFEM
Trigger: CATCTCAAATTGTAATCCCCATGTGTCAAGGGAGGG...TCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGTTTTATTTAAATATCCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp AACTATAATTCATGGAATTCAAAGTTCAAGCACACAGAACTGAAGGCATCTCTGGGAAACTTACAATCATaGCAGAGGGAGAAACAAGCA +
Preference number: 4 (lower is better)
Translates to: NYNSWNSKFKHTELKASLGNLQS*QREKQA
Trigger: TGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCC...CAGAGATGCCTTCAGTTCTGTGTGCTTGAACTTTGAATTCCATGAATTATAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR CCA 90 bp TACCACTGTGGATATTTAAATAAAACAACGGTTTTTCAAACCATGAGTCAGCTGTCAAAGAGATGCACTTaGCTCAGCCCCAAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: YHCGYLNKTTVFQTMSQLSKRCT*LSPKGK
Trigger: TTTACCTTTGGGGCTGAGCCAAGTGCATCTCTTTGA...CAGCTGACTCATGGTTTGAAAAACCGTTGTTTTATTTAAATATCCACAGTGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355654.6
ENST00000432667.5
CDS-3UTR TCA 90 bp TGTGGATATTTAAATAAAACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGACACCAGCAGTGGGGCTaGAAATACTATAGAAATGAA +
Preference number: 4 (lower is better)
Translates to: CGYLNKTTVFQTMSQLEGHQQWG*KYYRNE
Trigger: TTCATTTCTATAGTATTTTCAGCCCCACTGCTGGTG...TCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGTTTTATTTAAATATCCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
CDS-3UTR TCA 90 bp TTACGTAAATTCAGCCTATACCCCTACAATGTGTTTACTATGCAGGCATTGAAATTCTACTTAAACAGATaGAGCTCTCCAGTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: LRKFSLYPYNVFTMQALKFYLNR*SSPVSH
Trigger: ATGACTCACTGGAGAGCTTCATCTGTTTAAGTAGAA...TTTCAATGCCTGCATAGTAAACACATTGTAGGGGTATAGGCTGAATTTACGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR TCA 90 bp CTTCAGTGTGTGCCCTACCACTGTGGATATTTAAATAAAACAACGGTTTTTCAAGAACTAAGTAACAGGTaGAATCATAAGGATGGCACA +
Preference number: 4 (lower is better)
Translates to: LQCVPYHCGYLNKTTVFQELSNR*NHKDGT
Trigger: TGTGCCATCCTTATGATTTCACCTGTTACTTAGTTC...TTGAAAAACCGTTGTTTTATTTAAATATCCACAGTGGTAGGGCACACACTGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR GCA 90 bp GTAACTTTCAGAAATGCACAATTAGGCATGCTATCCAGATACAATGCACAATCAGCTTTAAAGTGGGATTaGACCTGTGCTTTCGTAAAT +
Preference number: 4 (lower is better)
Translates to: VTFRNAQLGMLSRYNAQSALKWD*TCAFVN
Trigger: ATTTACGAAAGCACAGGTGCAATCCCACTTTAAAGC...TGATTGTGCATTGTATCTGGATAGCATGCCTAATTGTGCATTTCTGAAAGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CCA 90 bp GTAACTTTCAGAAATGCACAATTAGGCATGCTATCCAGATACAATGCACAATCAGTAAACCATGGCTTCTaGCTTCAAATTCACAATTCC +
Preference number: 4 (lower is better)
Translates to: VTFRNAQLGMLSRYNAQSVNHGF*LQIHNS
Trigger: GGAATTGTGAATTTGAAGCCAGAAGCCATGGTTTAC...TGATTGTGCATTGTATCTGGATAGCATGCCTAATTGTGCATTTCTGAAAGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
3UTR CAA 72 bp TTATTTTGTAAAGGGCAAGAACATGTTAACATTTCCTaGCCACTTTACTTCTCACAGAAGCTAGCCATTCAG +
Preference number: 4 (lower is better)
Translates to: LFCKGQEHVNIS*PLYFSQKLAIQ
Trigger: CTGAATGGCTAGCTTCTGTGAGAAGTAAAGTGGCAAGGAAATGTTAACATGTTCTTGCCCTTTACAAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR GCA 90 bp CTTCAGTGTGTGCCCTACCACTGTGGATATTTAAATAAAACAACGGTTTTTCAAGCTATCCAGATACAATaGACAATCAGTATTCCCTTA +
Preference number: 4 (lower is better)
Translates to: LQCVPYHCGYLNKTTVFQAIQIQ*TISIPL
Trigger: TAAGGGAATACTGATTGTGCATTGTATCTGGATAGC...TTGAAAAACCGTTGTTTTATTTAAATATCCACAGTGGTAGGGCACACACTGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CCA 90 bp TCAACATTCTCTTCCCAGGCTTGTCTAATCAAAGATAACTGTTCCAATTACATTCTGGAGTCGAAATACTaGTATTTCGAAAATAATCTC +
Preference number: 4 (lower is better)
Translates to: STFSSQACLIKDNCSNYILESKY*YFENNL
Trigger: GAGATTATTTTCGAAATACCAGTATTTCGACTCCAG...AATGTAATTGGAACAGTTATCTTTGATTAGACAAGCCTGGGAAGAGAATGTTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS GCA 90 bp CTCCTTGAGCGCCCTCCTGCAGAAGACAAGCCCTGCCCTCCAAGCTaGAGCCCCGCCCTGCCCTCCAAGCTGCAGCCCCGCCCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: LLERPPAEDKPCPPS*SPALPSKLQPRPAL
Trigger: GAGGGCAGGGCGGGGCTGCAGCTTGGAGGGCAGGGCGGGGCTGCAGCTTGGAGGGCAGGGCTTGTCTTCTGCAGGAGGGCGCTCAAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477202.1
CDS CCA 90 bp GGGATCTGTCAGACGAACCCGGCACGGCGCACGCCCCGCCCACACTaGGCAGCGTTCCTCCGTGCCACCCCACACGATCAGGCTCCACCA +
Preference number: 5 (lower is better)
Translates to: GICQTNPARRTPRPH*AAFLRATPHDQAPP
Trigger: TGGTGGAGCCTGATCGTGTGGGGTGGCACGGAGGAACGCTGCCCAGTGTGGGCGGGGCGTGCGCCGTGCCGGGTTCGTCTGACAGATCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461640.1
CDS GCA 90 bp GGATGCCCAAGAGGCTGGGCAGTCGGGGGACGGCTTAGGGACCGCTaGATGTCAGCAGCGGGTCGGCGAGGGTGGGGTGAAGGGCATGGA +
Preference number: 5 (lower is better)
Translates to: GCPRGWAVGGRLRDR*MSAAGRRGWGEGHG
Trigger: TCCATGCCCTTCACCCCACCCTCGCCGACCCGCTGCTGACATGCAGCGGTCCCTAAGCCGTCCCCCGACTGCCCAGCCTCTTGGGCATCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS CCA 90 bp GCCTCGTGGAGTCGTAGGCACAGCCATGAACGGCTGGGACAGAGCTaGCAGGAGGCCGCAGGGCATCACTGCAGGACTCCGCGTTTACTC +
Preference number: 5 (lower is better)
Translates to: ASWSRRHSHERLGQS*QEAAGHHCRTPRLL
Trigger: GAGTAAACGCGGAGTCCTGCAGTGATGCCCTGCGGCCTCCTGCCAGCTCTGTCCCAGCCGTTCATGGCTGTGCCTACGACTCCACGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS CCA 90 bp CTGCTACAGAGAAATGTGAAGCCTGTCGGGGGTGAGGGGGCCTCGTaGAGTCGTAGGCACAGCCATGAACGGCTGGGACAGAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: LLQRNVKPVGGEGAS*SRRHSHERLGQSWQ
Trigger: CTGCCAGCTCTGTCCCAGCCGTTCATGGCTGTGCCTACGACTCCACGAGGCCCCCTCACCCCCGACAGGCTTCACATTTCTCTGTAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS-3UTR CAA 90 bp ACCCCGGGCTCCACAGGAGAAGCCAGGAGCACCACCCCCTCCAGTGACAACCAGAGACCTCAGGGAATCTaGAGCCATCGCCACGTGCAA +
Preference number: 5 (lower is better)
Translates to: TPGSTGEARSTTPSSDNQRPQGI*SHRHVQ
Trigger: TTGCACGTGGCGATGGCTCAAGATTCCCTGAGGTCT...CTGGTTGTCACTGGAGGGGGTGGTGCTCCTGGCTTCTCCTGTGGAGCCCGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355654.6
ENST00000432667.5
CDS GCA 90 bp CACAGGAAAGACCCCGAGGCCTCCCCCAGCAGAGAGACGTCACCCTaGAAGCCCTCTGGGTCATCAGCAGCACATCTGACCTTAGCTGGA +
Preference number: 5 (lower is better)
Translates to: HRKDPEASPSRETSP*KPSGSSAAHLTLAG
Trigger: TCCAGCTAAGGTCAGATGTGCTGCTGATGACCCAGAGGGCTTGCAGGGTGACGTCTCTCTGCTGGGGGAGGCCTCGGGGTCTTTCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS TCA 90 bp CTACTCTCTGCTGGGGACCGCAGCGGCTTCTCCAGAGCCGCGCCATaGCATAAGGACACAAGCGCATCTACTCCCATCAATGCACCCACC +
Preference number: 5 (lower is better)
Translates to: LLSAGDRSGFSRAAP*HKDTSASTPINAPT
Trigger: GGTGGGTGCATTGATGGGAGTAGATGCGCTTGTGTCCTTATGTCATGGCGCGGCTCTGGAGAAGCCGCTGCGGTCCCCAGCAGAGAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477202.1
CDS GCA 90 bp TGGAAGGTGGCCAGCCCCATGAGCCAGGGCTCAGTCCAGTCCGTCTaGTGTAGGAACACACCAGCAGACACTCACTGTCCTGCCACTCAA +
Preference number: 5 (lower is better)
Translates to: WKVASPMSQGSVQSV*CRNTPADTHCPATQ
Trigger: TTGAGTGGCAGGACAGTGAGTGTCTGCTGGTGTGTTCCTACAGCAGACGGACTGGACTGAGCCCTGGCTCATGGGGCTGGCCACCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477202.1
CDS-3UTR CAA 90 bp GGGGAGGCCTCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCACCTTCTGCGGACGGCATGGTGTaGGGAAGCCCGCTCTCACAG +
Preference number: 5 (lower is better)
Translates to: GEASGNLQSWQREKQAPSADGMV*GSPLSQ
Trigger: CTGTGAGAGCGGGCTTCCCAACACCATGCCGTCCGC...AGAAGGTGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGAGGCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281017.8
ENST00000432667.5
CDS TCA 90 bp CGCCACGTGCAAGACTTGATTTTCTCCAACCTCTCTGCAATACACTaGACTCTCCAGACAGTGCCGCACTCCGCCGCCTCCTGGACTCCC +
Preference number: 5 (lower is better)
Translates to: RHVQDLIFSNLSAIH*TLQTVPHSAASWTP
Trigger: GGGAGTCCAGGAGGCGGCGGAGTGCGGCACTGTCTGGAGAGTTCAGTGTATTGCAGAGAGGTTGGAGAAAATCAAGTCTTGCACGTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418447.1
ENST00000432667.5
ENST00000461640.1
ENST00000477202.1
CDS CCA 90 bp GTAAATGACAAAGGGACAGCAGCTGCGTCTGCTCCACAGCTGCACTaGGAAGGAGTGGTGCCGGGCCCTTCCATCCCTTTGGTTCTCATA +
Preference number: 5 (lower is better)
Translates to: VNDKGTAAASAPQLH*EGVVPGPSIPLVLI
Trigger: TATGAGAACCAAAGGGATGGAAGGGCCCGGCACCACTCCTTCCCAGTGCAGCTGTGGAGCAGACGCAGCTGCTGTCCCTTTGTCATTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS-3UTR CAA 90 bp GGTGGCCAGCCCCATGAGCCAGGGCTCAGTCCAGTCCGTCTGCAAGTATCCAGATTTCATGTCAAGTCATaGTCTGTGATGCGGCTGACC +
Preference number: 5 (lower is better)
Translates to: GGQPHEPGLSPVRLQVSRFHVKS*SVMRLT
Trigger: GGTCAGCCGCATCACAGACAATGACTTGACATGAAA...TCTGGATACTTGCAGACGGACTGGACTGAGCCCTGGCTCATGGGGCTGGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR CAA 90 bp ACTGTTCCAGCCCCACTCGGAACAAGCTGCCACCAACGCATGGCACCCACAGCCCAAGCTGTGAGTGAGTaGGGCTTAGGGATCCATAAA +
Preference number: 5 (lower is better)
Translates to: TVPAPLGTSCHQRMAPTAQAVSE*GLGIHK
Trigger: TTTATGGATCCCTAAGCCCAACTCACTCACAGCTTG...GGCTGTGGGTGCCATGCGTTGGTGGCAGCTTGTTCCGAGTGGGGCTGGAACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS TCA 90 bp AGGTCCTCTTGCTGTCAGTGCCAGTGCCTCTTTAGCAGAAGAGACTaGGGAAGGCGGAAGATCTCCACCTGCACAAAGGTACAGCGCCAG +
Preference number: 5 (lower is better)
Translates to: RSSCCQCQCLFSRRD*GRRKISTCTKVQRQ
Trigger: CTGGCGCTGTACCTTTGTGCAGGTGGAGATCTTCCGCCTTCCTCAGTCTCTTCTGCTAAAGAGGCACTGGCACTGACAGCAAGAGGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS TCA 90 bp GACACCGTCTATTTAGATAAGACTTTGGAGAGAGCTGATGTGGACTaGGGTGGGAGCAACACCCTCACTGGGCCCACCCTTGGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: DTVYLDKTLERADVD*GGSNTLTGPTLGSS
Trigger: GCTGCTCCCAAGGGTGGGCCCAGTGAGGGTGTTGCTCCCACCTCAGTCCACATCAGCTCTCTCCAAAGTCTTATCTAAATAGACGGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS-3UTR CAA 90 bp CCAGGAGCACCACCCCCTCCAGTGACAACCAGGTGTCTCCAAACTTTGCCCCATCTTCTCCATGGAGTGTaGACTTCAGGGCTTCCATTC +
Preference number: 5 (lower is better)
Translates to: PGAPPPPVTTRCLQTLPHLLHGV*TSGLPF
Trigger: GAATGGAAGCCCTGAAGTCAACACTCCATGGAGAAG...ATGGGGCAAAGTTTGGAGACACCTGGTTGTCACTGGAGGGGGTGGTGCTCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp CCGGGCTCCACAGGAGAAGCCAGGAGCACCACCCCCTCCAGTGACAACCAGGTGAGGAAATTAAGACGATaGCTCAAAGAGATGCACTTG +
Preference number: 5 (lower is better)
Translates to: PGSTGEARSTTPSSDNQVRKLRR*LKEMHL
Trigger: CAAGTGCATCTCTTTGAGCAATCGTCTTAATTTCCT...CACCTGGTTGTCACTGGAGGGGGTGGTGCTCCTGGCTTCTCCTGTGGAGCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp CTGGAGTCGAAATACTGGTATTTCGAAAATAATCTCCAGTTCATCGCAGCCGCCGCGGACGGCATGGTGTaGGGAAGCCCGCTCTCACAG +
Preference number: 5 (lower is better)
Translates to: LESKYWYFENNLQFIAAAADGMV*GSPLSQ
Trigger: CTGTGAGAGCGGGCTTCCCAACACCATGCCGTCCGC...GGCGGCTGCGATGAACTGGAGATTATTTTCGAAATACCAGTATTTCGACTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR CAA 90 bp CCAGGAGCACCACCCCCTCCAGTGACAACCAGGTGTCTCCAAACTTTGCCCCATTTTCATGTCAAGTCATaGTCTGTGATGCGGCTGACC +
Preference number: 5 (lower is better)
Translates to: PGAPPPPVTTRCLQTLPHFHVKS*SVMRLT
Trigger: GGTCAGCCGCATCACAGACAATGACTTGACATGAAA...ATGGGGCAAAGTTTGGAGACACCTGGTTGTCACTGGAGGGGGTGGTGCTCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp CACCAGGACATTAGGAAAGACACGCTTCTCCATGGAGTGTTGACTTCAGGGCTTGAGAGGGGCATGAACTaGGCTGGTGAGCTCTGCACC +
Preference number: 5 (lower is better)
Translates to: HQDIRKDTLLHGVLTSGLERGMN*AGELCT
Trigger: GGTGCAGAGCTCACCAGCCAAGTTCATGCCCCTCTC...AAGCCCTGAAGTCAACACTCCATGGAGAAGCGTGTCTTTCCTAATGTCCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp ACCCCGGGCTCCACAGGAGAAGCCAGGAGCACCACCCCCTCCAGTGACAACCAGAGGACACAATTGCATTaGTTTGTTAAAACTCAGCAC +
Preference number: 5 (lower is better)
Translates to: TPGSTGEARSTTPSSDNQRTQLH*FVKTQH
Trigger: GTGCTGAGTTTTAACAAACAAATGCAATTGTGTCCT...CTGGTTGTCACTGGAGGGGGTGGTGCTCCTGGCTTCTCCTGTGGAGCCCGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CAA 90 bp ACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACCCTATGGCCACATGCTaGGACTTAGGCCTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: TTVFQTMSQLEGCPRHAHPMATC*DLGLCL
Trigger: CAAGCAGAGGCCTAAGTCCAAGCATGTGGCCATAGG...GTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CAA 90 bp ACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGGTGTCTCCAAACTTaGCCCCATGTCTTGGAAGGT +
Preference number: 5 (lower is better)
Translates to: TVFQTMSQLEGCPRHAHCRCLQT*PHVLEG
Trigger: ACCTTCCAAGACATGGGGCAAAGTTTGGAGACACCT...GCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp CATGGCCGGGGAGGCCTCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCTTTCATGTCAAGTCATaGTCTGTGATGCGGCTGACC +
Preference number: 5 (lower is better)
Translates to: HGRGGLGKLTIMAEGETSFHVKS*SVMRLT
Trigger: GGTCAGCCGCATCACAGACAATGACTTGACATGAAA...GCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGAGGCCTCCCCGGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp CAGTCCGTCTGCAAGTATCCAGAGAGCATTGCCAGGCCTCAGAGAAACATGGGGACTACAGGTCCACATTaGACAGGAACCAAGAGCCAC +
Preference number: 5 (lower is better)
Translates to: QSVCKYPESIARPQRNMGTTGPH*TGTKSH
Trigger: GTGGCTCTTGGTTCCTGTCAAATGTGGACCTGTAGT...CCCCATGTTTCTCTGAGGCCTGGCAATGCTCTCTGGATACTTGCAGACGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR CAA 90 bp TCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCACTGGAATTTGAGATGCAATTaGGGTGGGGACACAAAGCCA +
Preference number: 5 (lower is better)
Translates to: SNHESAGRMPTPRTLQHWNLRCN*GGDTKP
Trigger: TGGCTTTGTGTCCCCACCCAAATTGCATCTCAAATT...CCAGTGCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp CAGCCACAAAGGCCCGAGAGGGGCATGAACTTGGCTGGTGAGCTCTGCACCTCAAAGGTGTCACAGTTCTaGGCAAGTAAATCCATTCCT +
Preference number: 5 (lower is better)
Translates to: QPQRPERGMNLAGELCTSKVSQF*ASKSIP
Trigger: AGGAATGGATTTACTTGCCAAGAACTGTGACACCTT...TGAGGTGCAGAGCTCACCAGCCAAGTTCATGCCCCTCTCGGGCCTTTGTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CAA 90 bp TCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCACTGGTTCCTTTCTTCTCTCTaGTGCATTCTTCAGGTCAGT +
Preference number: 5 (lower is better)
Translates to: SNHESAGRMPTPRTLQHWFLSSL*CILQVS
Trigger: ACTGACCTGAAGAATGCACAAGAGAGAAGAAAGGAA...CCAGTGCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
CDS-3UTR CAA 90 bp AGACCGTTCCCACAGCCTGACTACAAAGATCAGGCACCTGAAGACGCATGTCCTAGGTGTCTCCAAACTTaGCCCCATGTCTTGGAAGGT +
Preference number: 5 (lower is better)
Translates to: RPFPQPDYKDQAPEDACPRCLQT*PHVLEG
Trigger: ACCTTCCAAGACATGGGGCAAAGTTTGGAGACACCT...AGGACATGCGTCTTCAGGTGCCTGATCTTTGTAGTCAGGCTGTGGGAACGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp ACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACACTACAGGTCCACATTaGACAGGAACCAAGAGCCAC +
Preference number: 5 (lower is better)
Translates to: TTVFQTMSQLEGCPRHAHTTGPH*TGTKSH
Trigger: GTGGCTCTTGGTTCCTGTCAAATGTGGACCTGTAGT...GTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp CTGGAGTCGAAATACTGGTATTTCGAAAATAATCTCCAGTTCATCGCAGCCGCCGAGAGGGGCATGAACTaGGCTGGTGAGCTCTGCACC +
Preference number: 5 (lower is better)
Translates to: LESKYWYFENNLQFIAAAERGMN*AGELCT
Trigger: GGTGCAGAGCTCACCAGCCAAGTTCATGCCCCTCTC...GGCGGCTGCGATGAACTGGAGATTATTTTCGAAATACCAGTATTTCGACTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR CAA 90 bp CCAGGTGTCTCCAAACTTTGCCCCATGTCTTGGAAGGTGAAAACACCCTCTACTAGACCTCAGGGAATCTaGAGCCATCGCCACGTGCAA +
Preference number: 5 (lower is better)
Translates to: PGVSKLCPMSWKVKTPSTRPQGI*SHRHVQ
Trigger: TTGCACGTGGCGATGGCTCAAGATTCCCTGAGGTCT...AGTAGAGGGTGTTTTCACCTTCCAAGACATGGGGCAAAGTTTGGAGACACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp ATGGAGGGCCAAGCTGTGAGTGAGTTGGGCTTAGGGATCCATAAACCCAGAGATACTTTGCCCCATGTCTaGGAAGGTGAAAACACCCTC +
Preference number: 5 (lower is better)
Translates to: MEGQAVSELGLGIHKPRDTLPHV*EGENTL
Trigger: GAGGGTGTTTTCACCTTCCAAGACATGGGGCAAAGT...ATCTCTGGGTTTATGGATCCCTAAGCCCAACTCACTCACAGCTTGGCCCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CAA 90 bp GTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCAATTTGAGATGCAATTaGGGTGGGGACACAAAGCCA +
Preference number: 5 (lower is better)
Translates to: VFQTMSQLEGCPRHAHCSNLRCN*GGDTKP
Trigger: TGGCTTTGTGTCCCCACCCAAATTGCATCTCAAATT...GCTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp GGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAGCATGGGGATTACAATTaGAGATGCAATTTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: GFSNHESAGRMPTPRTLQHGDYN*RCNLGG
Trigger: CCCACCCAAATTGCATCTCAAATTGTAATCCCCATG...CTGCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp CATCCCACTCAACTTCGCGCCACTGAAGCTCCTTACCCTGAATTCCACCCCCAGCAACTGCTGATCATTTaGGCTTCTATGACTTTCCCT +
Preference number: 5 (lower is better)
Translates to: HPTQLRATEAPYPEFHPQQLLII*ASMTFP
Trigger: AGGGAAAGTCATAGAAGCCAAAATGATCAGCAGTTG...CTGGGGGTGGAATTCAGGGTAAGGAGCTTCAGTGGCGCGAAGTTGAGTGGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CAA 90 bp CTTCAGTGTGTGCCCTACCACTGTGGATATTTAAATAAAACAACGGTTTTTCAATGCCCATGTCACCCCTaGGCGGCCACGTGGGGCGTG +
Preference number: 5 (lower is better)
Translates to: LQCVPYHCGYLNKTTVFQCPCHP*AATWGV
Trigger: CACGCCCCACGTGGCCGCCAAGGGGTGACATGGGCA...TTGAAAAACCGTTGTTTTATTTAAATATCCACAGTGGTAGGGCACACACTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000405941.3
CDS-3UTR CAA 90 bp CCAGGTGTCTCCAAACTTTGCCCCATGTCTTGGAAGGTGAAAACACCCTCTACTCTTCTCCATGGAGTGTaGACTTCAGGGCTTCCATTC +
Preference number: 5 (lower is better)
Translates to: PGVSKLCPMSWKVKTPSTLLHGV*TSGLPF
Trigger: GAATGGAAGCCCTGAAGTCAACACTCCATGGAGAAG...AGTAGAGGGTGTTTTCACCTTCCAAGACATGGGGCAAAGTTTGGAGACACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp AAACACCCTCTACTGCGAACTGTGGCATGCACTAGAAAACACAGCACGAGGAGGACAGAACTGGGAGCATaGTGTTCCCAAGCACCTAAA +
Preference number: 5 (lower is better)
Translates to: KHPLLRTVACTRKHSTRRTELGA*CSQAPK
Trigger: TTTAGGTGCTTGGGAACACAATGCTCCCAGTTCTGT...CCTCCTCGTGCTGTGTTTTCTAGTGCATGCCACAGTTCGCAGTAGAGGGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp TCATGTCAAGTCATTGTCTGTGATGCGGCTGACCCAGGCACACAGGATTTTATGCCAGGGAAAAGATGCTaGGGCCTGACCGGTATATCT +
Preference number: 5 (lower is better)
Translates to: SCQVIVCDAADPGTQDFMPGKRC*GLTGIS
Trigger: AGATATACCGGTCAGGCCCAAGCATCTTTTCCCTGG...CATAAAATCCTGTGTGCCTGGGTCAGCCGCATCACAGACAATGACTTGACATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CAA 90 bp CACGAGGAGGAGGGCATGGTGCCCATGTACAGGTGGCACTGTTTATTATTGAGTTGTAGGCATGTGAGGTaGGAGATTTCTGTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: HEEEGMVPMYRWHCLLLSCRHVR*EISVLL
Trigger: CAGCAACACAGAAATCTCCAACCTCACATGCCTACA...ACTCAATAATAAACAGTGCCACCTGTACATGGGCACCATGCCCTCCTCCTCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CAA 90 bp GACAAGGAAATTAAGACGATTGCTCAAAGAGATGCACTTGGCTCAGCCCCAAAGAGACCTCAGGGAATCTaGAGCCATCGCCACGTGCAA +
Preference number: 5 (lower is better)
Translates to: DKEIKTIAQRDALGSAPKRPQGI*SHRHVQ
Trigger: TTGCACGTGGCGATGGCTCAAGATTCCCTGAGGTCT...CTTTGGGGCTGAGCCAAGTGCATCTCTTTGAGCAATCGTCTTAATTTCCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
CDS-3UTR CAA 90 bp TCGGGAAACTTACAATCATGGCAGAGGGAGAAACAAGCACCTTCTTCACAAGGCAGGTGTCTCCAAACTTaGCCCCATGTCTTGGAAGGT +
Preference number: 5 (lower is better)
Translates to: SGNLQSWQREKQAPSSQGRCLQT*PHVLEG
Trigger: ACCTTCCAAGACATGGGGCAAAGTTTGGAGACACCT...GCCTTGTGAAGAAGGTGCTTGTTTCTCCCTCTGCCATGATTGTAAGTTTCCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp GAAGCTCTGCAGAGACCGTTCCCACAGCCTGACTACAAAGATCAGGCACCTGAATGCTTTAAAGTGGGATaGCACCTGTGCTTTCGTAAA +
Preference number: 5 (lower is better)
Translates to: EALQRPFPQPDYKDQAPECFKVG*HLCFRK
Trigger: TTTACGAAAGCACAGGTGCAATCCCACTTTAAAGCA...TTCAGGTGCCTGATCTTTGTAGTCAGGCTGTGGGAACGGTCTCTGCAGAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CAA 90 bp GGTGAAAACACCCTCTACTGCGAACTGTGGCATGCACTAGAAAACACAGCACGAAATTTGAGATGCAATTaGGGTGGGGACACAAAGCCA +
Preference number: 5 (lower is better)
Translates to: GENTLYCELWHALENTARNLRCN*GGDTKP
Trigger: TGGCTTTGTGTCCCCACCCAAATTGCATCTCAAATT...TCGTGCTGTGTTTTCTAGTGCATGCCACAGTTCGCAGTAGAGGGTGTTTTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp TCTCTCTGCCCCAGCACAGCTGACATTTCATGTCAAGTCATTGTCTGTGATGCGCATGGGGATTACAATTaGAGATGCAATTTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: SLCPSTADISCQVIVCDAHGDYN*RCNLGG
Trigger: CCCACCCAAATTGCATCTCAAATTGTAATCCCCATG...CGCATCACAGACAATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp GAAGCTCTGCAGAGACCGTTCCCACAGCCTGACTACAAAGATCAGGCACCTGAACATGTTAACATTTCCTaGCCACTTTACTTCTCACAG +
Preference number: 5 (lower is better)
Translates to: EALQRPFPQPDYKDQAPEHVNIS*PLYFSQ
Trigger: CTGTGAGAAGTAAAGTGGCAAGGAAATGTTAACATG...TTCAGGTGCCTGATCTTTGTAGTCAGGCTGTGGGAACGGTCTCTGCAGAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CAA 90 bp ACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCCACGCACACTGCAACACCAACAATCATTaGAAAAGCGTTAAACCTCAC +
Preference number: 5 (lower is better)
Translates to: TVFQTMSQLEGCPRHAHCNTNNH*KSVKPH
Trigger: GTGAGGTTTAACGCTTTTCAAATGATTGTTGGTGTT...GCAGTGTGCGTGGCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CAA 90 bp GAATTCAAAGTTCAAGCACACAGAACTGAAGGCATCTCTGATGTGCTCCTTTCGCTTCTCCATGGAGTGTaGACTTCAGGGCTTCCATTC +
Preference number: 5 (lower is better)
Translates to: EFKVQAHRTEGISDVLLSLLHGV*TSGLPF
Trigger: GAATGGAAGCCCTGAAGTCAACACTCCATGGAGAAG...CGAAAGGAGCACATCAGAGATGCCTTCAGTTCTGTGTGCTTGAACTTTGAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR CAA 90 bp GAGGAGGGCATGGTGCCCATGTACAGGTGGCACTGTTTATTATTGAGTTTCATAACAGAACTGGGAGCATaGTGTTCCCAAGCACCTAAA +
Preference number: 5 (lower is better)
Translates to: EEGMVPMYRWHCLLLSFITELGA*CSQAPK
Trigger: TTTAGGTGCTTGGGAACACAATGCTCCCAGTTCTGT...TATGAAACTCAATAATAAACAGTGCCACCTGTACATGGGCACCATGCCCTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp ACGTATTTTCCAAGAGCTTCCTTCCAAGGTCTCTCTGCCCCAGCACAGCTGACATTTTTACCTGGATGCTaGAGCAAAAGGATATTCGGT +
Preference number: 5 (lower is better)
Translates to: TYFPRASFQGLSAPAQLTFLPGC*SKRIFG
Trigger: ACCGAATATCCTTTTGCTCAAGCATCCAGGTAAAAA...TGTCAGCTGTGCTGGGGCAGAGAGACCTTGGAAGGAAGCTCTTGGAAAATACGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS TCA 90 bp GATTGCTCAAAGAGATGCACTTGGCTCAGCCCCAAAGGTAAAACATaGATCATCATTTCAGACTCCTTAGTCAGCACTGAAGACCTCAGG +
Preference number: 5 (lower is better)
Translates to: DCSKRCTWLSPKGKT*IIISDSLVSTEDLR
Trigger: CCTGAGGTCTTCAGTGCTGACTAAGGAGTCTGAAATGATGATTCATGTTTTACCTTTGGGGCTGAGCCAAGTGCATCTCTTTGAGCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355654.6
ENST00000418447.1
ENST00000432667.5
ENST00000461640.1
ENST00000477202.1
CDS-3UTR CAA 90 bp AGGTCTCTCTGCCCCAGCACAGCTGACATTTCATGTCAAGTCATTGTCTGTGATTTCCTTTCTTCTCTCTaGTGCATTCTTCAGGTCAGT +
Preference number: 5 (lower is better)
Translates to: RSLCPSTADISCQVIVCDFLSSL*CILQVS
Trigger: ACTGACCTGAAGAATGCACAAGAGAGAAGAAAGGAA...ATCACAGACAATGACTTGACATGAAATGTCAGCTGTGCTGGGGCAGAGAGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp TCAACATTCTCTTCCCAGGCTTGTCTAATCAAAGATAACTGTTCCAATTACATTGAGAGGGGCATGAACTaGGCTGGTGAGCTCTGCACC +
Preference number: 5 (lower is better)
Translates to: STFSSQACLIKDNCSNYIERGMN*AGELCT
Trigger: GGTGCAGAGCTCACCAGCCAAGTTCATGCCCCTCTC...AATGTAATTGGAACAGTTATCTTTGATTAGACAAGCCTGGGAAGAGAATGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp GACAAGGAAATTAAGACGATTGCTCAAAGAGATGCACTTGGCTCAGCCCCAAAGCATGGGGATTACAATTaGAGATGCAATTTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: DKEIKTIAQRDALGSAPKHGDYN*RCNLGG
Trigger: CCCACCCAAATTGCATCTCAAATTGTAATCCCCATG...CTTTGGGGCTGAGCCAAGTGCATCTCTTTGAGCAATCGTCTTAATTTCCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR CAA 90 bp AATTCAAAGTTCAAGCACACAGAACTGAAGGCATCTCTGATGTGCTCCTTTCGTCGCCACGTGCAAGACTaGATTTTCTCCAACCTCTCT +
Preference number: 5 (lower is better)
Translates to: NSKFKHTELKASLMCSFRRHVQD*IFSNLS
Trigger: AGAGAGGTTGGAGAAAATCAAGTCTTGCACGTGGCG...ACGAAAGGAGCACATCAGAGATGCCTTCAGTTCTGTGTGCTTGAACTTTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
CDS-3UTR CAA 90 bp TTAAATAAAACAACGGTTTTTCAAACCATGAGTCAGCTGGAAGGATGCCCACGCACAGAACTGGGAGCATaGTGTTCCCAAGCACCTAAA +
Preference number: 5 (lower is better)
Translates to: LNKTTVFQTMSQLEGCPRTELGA*CSQAPK
Trigger: TTTAGGTGCTTGGGAACACAATGCTCCCAGTTCTGT...GCGTGGGCATCCTTCCAGCTGACTCATGGTTTGAAAAACCGTTGTTTTATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp GTAACTTTCAGAAATGCACAATTAGGCATGCTATCCAGATACAATGCACAATCATGCAGCAACCAGGGCTaGGAGACATCTTCGCACCAT +
Preference number: 5 (lower is better)
Translates to: VTFRNAQLGMLSRYNAQSCSNQG*ETSSHH
Trigger: ATGGTGCGAAGATGTCTCCAAGCCCTGGTTGCTGCA...TGATTGTGCATTGTATCTGGATAGCATGCCTAATTGTGCATTTCTGAAAGTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CAA 90 bp ATGATGCTGCCTGGGTATTTCACAGGCATTTGTATAATAAATGAAATGAACTTGGGGTCACTTGTCAGCTaGGGAGGAGGTGGAACCTCA +
Preference number: 5 (lower is better)
Translates to: MMLPGYFTGICIINEMNLGSLVS*GGGGTS
Trigger: TGAGGTTCCACCTCCTCCCAAGCTGACAAGTGACCC...CAAGTTCATTTCATTTATTATACAAATGCCTGTGAAATACCCAGGCAGCATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CAA 90 bp CAGTGTGTGCCCTACCACTGTGGATATTTAAATAAAACAACGGTTTTTCAAACCACTTTGCCCCATGTCTaGGAAGGTGAAAACACCCTC +
Preference number: 5 (lower is better)
Translates to: QCVPYHCGYLNKTTVFQTTLPHV*EGENTL
Trigger: GAGGGTGTTTTCACCTTCCAAGACATGGGGCAAAGT...GGTTTGAAAAACCGTTGTTTTATTTAAATATCCACAGTGGTAGGGCACACACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp GTCTTGGAAGGTGAAAACACCCTCTACTGCGAACTGTGGCATGCACTAGAAAACTTGGAGATTTCTGTGTaGCTGTTGTCAGTAAAACAA +
Preference number: 5 (lower is better)
Translates to: VLEGENTLYCELWHALENLEISV*LLSVKQ
Trigger: TTGTTTTACTGACAACAGCAACACAGAAATCTCCAA...GTTTTCTAGTGCATGCCACAGTTCGCAGTAGAGGGTGTTTTCACCTTCCAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000281017.8
CDS-3UTR CAA 90 bp CTTCAGTGTGTGCCCTACCACTGTGGATATTTAAATAAAACAACGGTTTTTCAAACTACAGGTCCACATTaGACAGGAACCAAGAGCCAC +
Preference number: 5 (lower is better)
Translates to: LQCVPYHCGYLNKTTVFQTTGPH*TGTKSH
Trigger: GTGGCTCTTGGTTCCTGTCAAATGTGGACCTGTAGT...TTGAAAAACCGTTGTTTTATTTAAATATCCACAGTGGTAGGGCACACACTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp GCATGCTATCCAGATACAATGCACAATCAGTATTCCCTTATTGAACACCTATTTCGCCACGTGCAAGACTaGATTTTCTCCAACCTCTCT +
Preference number: 5 (lower is better)
Translates to: ACYPDTMHNQYSLIEHLFRHVQD*IFSNLS
Trigger: AGAGAGGTTGGAGAAAATCAAGTCTTGCACGTGGCG...AAATAGGTGTTCAATAAGGGAATACTGATTGTGCATTGTATCTGGATAGCATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432667.5
CDS-3UTR CAA 90 bp TACCACTGTGGATATTTAAATAAAACAACGGTTTTTCAAACCATGAGTCAGCTGACTTTGCCCCATGTCTaGGAAGGTGAAAACACCCTC +
Preference number: 5 (lower is better)
Translates to: YHCGYLNKTTVFQTMSQLTLPHV*EGENTL
Trigger: GAGGGTGTTTTCACCTTCCAAGACATGGGGCAAAGT...CAGCTGACTCATGGTTTGAAAAACCGTTGTTTTATTTAAATATCCACAGTGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000432667.5
CDS-3UTR CAA 90 bp TACCACTGTGGATATTTAAATAAAACAACGGTTTTTCAAACCATGAGTCAGCTGTTCCTTTCTTCTCTCTaGTGCATTCTTCAGGTCAGT +
Preference number: 5 (lower is better)
Translates to: YHCGYLNKTTVFQTMSQLFLSSL*CILQVS
Trigger: ACTGACCTGAAGAATGCACAAGAGAGAAGAAAGGAA...CAGCTGACTCATGGTTTGAAAAACCGTTGTTTTATTTAAATATCCACAGTGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281017.8
ENST00000355654.6
ENST00000405941.3
ENST00000432667.5
CDS-3UTR CAA 90 bp TGCAACTATAATTCATGGAATTCAAAGTTCAAGCACACAGAACTGAAGGCATCTAGGAAATTAAGACGATaGCTCAAAGAGATGCACTTG +
Preference number: 5 (lower is better)
Translates to: CNYNSWNSKFKHTELKASRKLRR*LKEMHL
Trigger: CAAGTGCATCTCTTTGAGCAATCGTCTTAATTTCCT...AGATGCCTTCAGTTCTGTGTGCTTGAACTTTGAATTCCATGAATTATAGTTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418447.1
ENST00000432667.5
CDS-3UTR CAA 90 bp TACCACTGTGGATATTTAAATAAAACAACGGTTTTTCAAACCATGAGTCAGCTGAGGAAATTAAGACGATaGCTCAAAGAGATGCACTTG +
Preference number: 5 (lower is better)
Translates to: YHCGYLNKTTVFQTMSQLRKLRR*LKEMHL
Trigger: CAAGTGCATCTCTTTGAGCAATCGTCTTAATTTCCT...CAGCTGACTCATGGTTTGAAAAACCGTTGTTTTATTTAAATATCCACAGTGGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355654.6
ENST00000432667.5
CDS GCA 72 bp GCGCACGCCCCGCCCACACTGGGCAGCGTTCCTCCGTaGCACCCCACACGATCAGGCTCCACCACGCACGCC +
Preference number: 6 (lower is better)
Translates to: AHAPPTLGSVPP*HPTRSGSTTHA
Trigger: GGCGTGCGTGGTGGAGCCTGATCGTGTGGGGTGGCACGGAGGAACGCTGCCCAGTGTGGGCGGGGCGTGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461640.1
CDS CCA 72 bp CAGACGAACCCGGCACGGCGCACGCCCCGCCCACACTaGGCAGCGTTCCTCCGTGCCACCCCACACGATCAG +
Preference number: 6 (lower is better)
Translates to: QTNPARRTPRPH*AAFLRATPHDQ
Trigger: CTGATCGTGTGGGGTGGCACGGAGGAACGCTGCCCAGTGTGGGCGGGGCGTGCGCCGTGCCGGGTTCGTCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461640.1
CDS GCA 72 bp AGAGGCTGGGCAGTCGGGGGACGGCTTAGGGACCGCTaGATGTCAGCAGCGGGTCGGCGAGGGTGGGGTGAA +
Preference number: 6 (lower is better)
Translates to: RGWAVGGRLRDR*MSAAGRRGWGE
Trigger: TTCACCCCACCCTCGCCGACCCGCTGCTGACATGCAGCGGTCCCTAAGCCGTCCCCCGACTGCCCAGCCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS GCA 72 bp GCAGTGCTTGGCTCTGAGGCCCACGCTTCCCCAGGATaGCCAAGAGGCTGGGCAGTCGGGGGACGGCTTAGG +
Preference number: 6 (lower is better)
Translates to: AVLGSEAHASPG*PRGWAVGGRLR
Trigger: CCTAAGCCGTCCCCCGACTGCCCAGCCTCTTGGGCATCCTGGGGAAGCGTGGGCCTCAGAGCCAAGCACTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS CCA 72 bp CCCATCGAGTGCCCATGTCACCCCTTGGCGGCCACGTaGGGCGTGGGCTCCCCTGGGATCTGTCAGACGAAC +
Preference number: 6 (lower is better)
Translates to: PIECPCHPLAAT*GVGSPGICQTN
Trigger: GTTCGTCTGACAGATCCCAGGGGAGCCCACGCCCCACGTGGCCGCCAAGGGGTGACATGGGCACTCGATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405941.3
ENST00000461640.1
CDS TCA 72 bp GGAGCACGCAGAGCGCGTGGAAGGTGGCCAGCCCCATaGGCCAGGGCTCAGTCCAGTCCGTCTGCAGAAGAC +
Preference number: 6 (lower is better)
Translates to: GARRARGRWPAP*ARAQSSPSAED
Trigger: GTCTTCTGCAGACGGACTGGACTGAGCCCTGGCTCATGGGGCTGGCCACCTTCCACGCGCTCTGCGTGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405941.3
CDS TCA 72 bp GGAGCACGCAGAGCGCGTGGAAGGTGGCCAGCCCCATaGGCCAGGGCTCAGTCCAGTCCGTCTGCTGTAGGA +
Preference number: 6 (lower is better)
Translates to: GARRARGRWPAP*ARAQSSPSAVG
Trigger: TCCTACAGCAGACGGACTGGACTGAGCCCTGGCTCATGGGGCTGGCCACCTTCCACGCGCTCTGCGTGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477202.1
CDS GCA 72 bp GACCCCGAGGCCTCCCCCAGCAGAGAGACGTCACCCTaGAAGCCCTCTGGGTCATCAGCAGCACATCTGACC +
Preference number: 6 (lower is better)
Translates to: DPEASPSRETSP*KPSGSSAAHLT
Trigger: GGTCAGATGTGCTGCTGATGACCCAGAGGGCTTGCAGGGTGACGTCTCTCTGCTGGGGGAGGCCTCGGGGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS CCA 72 bp AGTCGTAGGCACAGCCATGAACGGCTGGGACAGAGCTaGCAGGAGGCCGCAGGGCATCACTGCAGGACTCCG +
Preference number: 6 (lower is better)
Translates to: SRRHSHERLGQS*QEAAGHHCRTP
Trigger: CGGAGTCCTGCAGTGATGCCCTGCGGCCTCCTGCCAGCTCTGTCCCAGCCGTTCATGGCTGTGCCTACGACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS CAA 90 bp ATGCTGACGGGGAAAGAGCTGACAGAGAAGGCGGACGGCATGGTGTaGGGAAGCCCGCTCTCACAGCAACCGCCGAACCCGGCCTGGCCA +
Preference number: 6 (lower is better)
Translates to: MLTGKELTEKADGMV*GSPLSQQPPNPAWP
Trigger: TGGCCAGGCCGGGTTCGGCGGTTGCTGTGAGAGCGGGCTTCCCAACACCATGCCGTCCGCCTTCTCTGTCAGCTCTTTCCCCGTCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281017.8
ENST00000432667.5
CDS CAA 72 bp GGGAAAGAGCTGACAGAGAAGGCGGACGGCATGGTGTaGGGAAGCCCGCTCTCACAGCAACCGCCGAACCCG +
Preference number: 6 (lower is better)
Translates to: GKELTEKADGMV*GSPLSQQPPNP
Trigger: CGGGTTCGGCGGTTGCTGTGAGAGCGGGCTTCCCAACACCATGCCGTCCGCCTTCTCTGTCAGCTCTTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281017.8
ENST00000432667.5
CDS TCA 72 bp ACACTCTGGAACGTTCTGAGGGGCAGTGCTTGGCTCTaGGGCCCACGCTTCCCCAGGATGCCCAAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: TLWNVLRGSAWL*GPRFPRMPKRL
Trigger: CAGCCTCTTGGGCATCCTGGGGAAGCGTGGGCCTCAGAGCCAAGCACTGCCCCTCAGAACGTTCCAGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS CCA 72 bp AGAAATGTGAAGCCTGTCGGGGGTGAGGGGGCCTCGTaGAGTCGTAGGCACAGCCATGAACGGCTGGGACAG +
Preference number: 6 (lower is better)
Translates to: RNVKPVGGEGAS*SRRHSHERLGQ
Trigger: CTGTCCCAGCCGTTCATGGCTGTGCCTACGACTCCACGAGGCCCCCTCACCCCCGACAGGCTTCACATTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS CCA 72 bp AAAGGGACAGCAGCTGCGTCTGCTCCACAGCTGCACTaGGAAGGAGTGGTGCCGGGCCCTTCCATCCCTTTG +
Preference number: 6 (lower is better)
Translates to: KGTAAASAPQLH*EGVVPGPSIPL
Trigger: CAAAGGGATGGAAGGGCCCGGCACCACTCCTTCCCAGTGCAGCTGTGGAGCAGACGCAGCTGCTGTCCCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS TCA 72 bp GTCCAAGCATGTGGCGAGTGCTGCTACAGAGAAATGTaGAGCCTGTCGGGGGTGAGGGGGCCTCGTGGAGTC +
Preference number: 6 (lower is better)
Translates to: VQACGECCYREM*SLSGVRGPRGV
Trigger: GACTCCACGAGGCCCCCTCACCCCCGACAGGCTTCACATTTCTCTGTAGCAGCACTCGCCACATGCTTGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS GCA 72 bp GCCAGCCCCATGAGCCAGGGCTCAGTCCAGTCCGTCTaGTGTAGGAACACACCAGCAGACACTCACTGTCCT +
Preference number: 6 (lower is better)
Translates to: ASPMSQGSVQSV*CRNTPADTHCP
Trigger: AGGACAGTGAGTGTCTGCTGGTGTGTTCCTACAGCAGACGGACTGGACTGAGCCCTGGCTCATGGGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477202.1
CDS CAA 90 bp CCACAGCTGCACTGGGAAGGAGTGGTGCCGGGCCCTTCCATCCCTTaGGTTCTCATAGCAGGTCCTCTTGCTGTCAGTGCCAGTGCCTCT +
Preference number: 6 (lower is better)
Translates to: PQLHWEGVVPGPSIP*VLIAGPLAVSASAS
Trigger: AGAGGCACTGGCACTGACAGCAAGAGGACCTGCTATGAGAACCAAAGGGATGGAAGGGCCCGGCACCACTCCTTCCCAGTGCAGCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS TCA 72 bp GCTGGGGACCGCAGCGGCTTCTCCAGAGCCGCGCCATaGCATAAGGACACAAGCGCATCTACTCCCATCAAT +
Preference number: 6 (lower is better)
Translates to: AGDRSGFSRAAP*HKDTSASTPIN
Trigger: ATTGATGGGAGTAGATGCGCTTGTGTCCTTATGTCATGGCGCGGCTCTGGAGAAGCCGCTGCGGTCCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477202.1
CDS TCA 72 bp CTGCTGTACCTGGGGACAGTGTCTGGCTCAGGGACCTaGAGTAGCCAGGCTCAGATCCACTGCTGCTCAGTC +
Preference number: 6 (lower is better)
Translates to: LLYLGTVSGSGT*SSQAQIHCCSV
Trigger: GACTGAGCAGCAGTGGATCTGAGCCTGGCTACTTCAGGTCCCTGAGCCAGACACTGTCCCCAGGTACAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477202.1
CDS CAA 72 bp CAGCGCCAGGGAGGGCAGAGGATCTGCACGTGGGTGTaGATGATTCTCTCAGCAGCCAGCACAGGAAATGCC +
Preference number: 6 (lower is better)
Translates to: QRQGGQRICTWV*MILSAASTGNA
Trigger: GGCATTTCCTGTGCTGGCTGCTGAGAGAATCATCAACACCCACGTGCAGATCCTCTGCCCTCCCTGGCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS CAA 72 bp CACTGGGAAGGAGTGGTGCCGGGCCCTTCCATCCCTTaGGTTCTCATAGCAGGTCCTCTTGCTGTCAGTGCC +
Preference number: 6 (lower is better)
Translates to: HWEGVVPGPSIP*VLIAGPLAVSA
Trigger: GGCACTGACAGCAAGAGGACCTGCTATGAGAACCAAAGGGATGGAAGGGCCCGGCACCACTCCTTCCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS CAA 72 bp ACTGAGGTGGGAGCAACACCCTCACTGGGCCCACCCTaGGGAGCAGCGGTAATCTCCACTGTACTGTCCCAA +
Preference number: 6 (lower is better)
Translates to: TEVGATPSLGPP*GAAVISTVLSQ
Trigger: TTGGGACAGTACAGTGGAGATTACCGCTGCTCCCAAGGGTGGGCCCAGTGAGGGTGTTGCTCCCACCTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS GCA 72 bp TGCACAAAGGTACAGCGCCAGGGAGGGCAGAGGATCTaGACGTGGGTGTTGATGATTCTCTCAGCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: CTKVQRQGGQRI*TWVLMILSAAS
Trigger: GCTGGCTGCTGAGAGAATCATCAACACCCACGTGCAGATCCTCTGCCCTCCCTGGCGCTGTACCTTTGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS TCA 72 bp CAAGACTTGATTTTCTCCAACCTCTCTGCAATACACTaGACTCTCCAGACAGTGCCGCACTCCGCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: QDLIFSNLSAIH*TLQTVPHSAAS
Trigger: GGAGGCGGCGGAGTGCGGCACTGTCTGGAGAGTTCAGTGTATTGCAGAGAGGTTGGAGAAAATCAAGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418447.1
ENST00000432667.5
ENST00000461640.1
ENST00000477202.1
CDS CAA 90 bp ACAAAGGTACAGCGCCAGGGAGGGCAGAGGATCTGCACGTGGGTGTaGATGATTCTCTCAGCAGCCAGCACAGGAAATGCCATCAACAAA +
Preference number: 6 (lower is better)
Translates to: TKVQRQGGQRICTWV*MILSAASTGNAINK
Trigger: TTTGTTGATGGCATTTCCTGTGCTGGCTGCTGAGAGAATCATCAACACCCACGTGCAGATCCTCTGCCCTCCCTGGCGCTGTACCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS TCA 72 bp TGCTGTCAGTGCCAGTGCCTCTTTAGCAGAAGAGACTaGGGAAGGCGGAAGATCTCCACCTGCACAAAGGTA +
Preference number: 6 (lower is better)
Translates to: CCQCQCLFSRRD*GRRKISTCTKV
Trigger: TACCTTTGTGCAGGTGGAGATCTTCCGCCTTCCTCAGTCTCTTCTGCTAAAGAGGCACTGGCACTGACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS GCA 72 bp CCCTTCCATCCCTTTGGTTCTCATAGCAGGTCCTCTTaGTGTCAGTGCCAGTGCCTCTTTAGCAGAAGAGAC +
Preference number: 6 (lower is better)
Translates to: PFHPFGSHSRSS*CQCQCLFSRRD
Trigger: GTCTCTTCTGCTAAAGAGGCACTGGCACTGACAGCAAGAGGACCTGCTATGAGAACCAAAGGGATGGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS TCA 72 bp TATTTAGATAAGACTTTGGAGAGAGCTGATGTGGACTaGGGTGGGAGCAACACCCTCACTGGGCCCACCCTT +
Preference number: 6 (lower is better)
Translates to: YLDKTLERADVD*GGSNTLTGPTL
Trigger: AAGGGTGGGCCCAGTGAGGGTGTTGCTCCCACCTCAGTCCACATCAGCTCTCTCCAAAGTCTTATCTAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497508.1
CDS TCA 72 bp CCACTGTACTGTCCCAAATGCAATGAATGCTCATTATaGAGAAAACACACTGGGTCACAGGACAGGGAGACA +
Preference number: 6 (lower is better)
Translates to: PLYCPKCNECSL*RKHTGSQDRET
Trigger: TGTCTCCCTGTCCTGTGACCCAGTGTGTTTTCTTCATAATGAGCATTCATTGCATTTGGGACAGTACAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497508.1