Pregenerated sensors for TMEM179B (Homo sapiens)
Ensembl gene IDs: ENSG00000185475Ensembl transcript IDs: ENST00000333449.9, ENST00000526546.1, ENST00000532345.1, ENST00000532586.1, ENST00000533861.5
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGAGCTCCACTCAGGGTCACCCCTCTCCAGAGGCCGGTATGGGGTaGCTTCAGACTTCCACTGCACGACCTGGAGCACCAAGACCACAC | + |
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Preference number: 1 (lower is better) Translates to: QSSTQGHPSPEAGMG*LQTSTARPGAPRPH Trigger: GTGTGGTCTTGGTGCTCCAGGTCGTGCAGTGGAAGTCTGAAGCCACCCCATACCGGCCTCTGGAGAGGGGTGACCCTGAGTGGAGCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| 3UTR CCA 90 bp | TGTCTCAGAGCTCCACTCAGGGTCACCCCTCTCCAGAGGCCGGTATaGGGTGGCTTCAGACTTCCACTGCACGACCTGGAGCACCAAGAC | + |
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Preference number: 1 (lower is better) Translates to: CLRAPLRVTPLQRPV*GGFRLPLHDLEHQD Trigger: GTCTTGGTGCTCCAGGTCGTGCAGTGGAAGTCTGAAGCCACCCCATACCGGCCTCTGGAGAGGGGTGACCCTGAGTGGAGCTCTGAGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| 3UTR-3UTR CCA 90 bp | GGAGTCTTCGGCTGCAGGAAGCACTCCGCTTATTCTTCAGGAATGGGAAAGGCGGAGGCCGGTATGGGGTaGCTTCAGACTTCCACTGCA | + |
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Preference number: 2 (lower is better) Translates to: GVFGCRKHSAYSSGMGKAEAGMG*LQTSTA Trigger: TGCAGTGGAAGTCTGAAGCCACCCCATACCGGCCTC...CGCCTTTCCCATTCCTGAAGAATAAGCGGAGTGCTTCCTGCAGCCGAAGACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| 3UTR-3UTR GCA 90 bp | GGATTACAGGCACTTGGGCATGGAGTCTTCGGCTGCAGGAAGCACTCCGCTTATCATGGAGTCTTCGGCTaGAGGAAGCACTCCGCTTAT | + |
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Preference number: 2 (lower is better) Translates to: GLQALGHGVFGCRKHSAYHGVFG*RKHSAY Trigger: ATAAGCGGAGTGCTTCCTGCAGCCGAAGACTCCATG...ATAAGCGGAGTGCTTCCTGCAGCCGAAGACTCCATGCCCAAGTGCCTGTAATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333449.9 ENST00000533861.5 |
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| 3UTR-3UTR GCA 90 bp | GGGCATGGAGTCTTCGGCTGCAGGAAGCACTCCGCTTATTCTTCAGGAATGGGACATGGAGTCTTCGGCTaGAGGAAGCACTCCGCTTAT | + |
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Preference number: 2 (lower is better) Translates to: GHGVFGCRKHSAYSSGMGHGVFG*RKHSAY Trigger: ATAAGCGGAGTGCTTCCTGCAGCCGAAGACTCCATG...TCCCATTCCTGAAGAATAAGCGGAGTGCTTCCTGCAGCCGAAGACTCCATGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| 3UTR-3UTR GCA 90 bp | ATGGAGTCTTCGGCTGCAGGAAGCACTCCGCTTATTCTTCAGGAATGGGAAAGGGCTTCAGACTTCCACTaGACGACCTGGAGCACCAAG | + |
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Preference number: 2 (lower is better) Translates to: MESSAAGSTPLILQEWERASDFH*TTWSTK Trigger: CTTGGTGCTCCAGGTCGTGCAGTGGAAGTCTGAAGC...CCTTTCCCATTCCTGAAGAATAAGCGGAGTGCTTCCTGCAGCCGAAGACTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| 3UTR-3UTR CCA 90 bp | AGCTGCCTAACAGTACCTCTAAGTTTCAGTCCATGTCTGCTTAGCCTTCACTCCACAGGCACTTGGGCATaGAGTCTTCGGCTGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: SCLTVPLSFSPCLLSLHSTGTWA*SLRLQE Trigger: TTCCTGCAGCCGAAGACTCCATGCCCAAGTGCCTGT...GGAGTGAAGGCTAAGCAGACATGGACTGAAACTTAGAGGTACTGTTAGGCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333449.9 |
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| 3UTR-3UTR CCA 90 bp | CAAATAAAGGAGCAGTCATCCCTAGGGCAGCTGCCTAACAGTACCTCTAAGTTTGGGATTACAGGCACTTaGGCATGGAGTCTTCGGCTG | + |
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Preference number: 2 (lower is better) Translates to: QIKEQSSLGQLPNSTSKFGITGT*AWSLRL Trigger: CAGCCGAAGACTCCATGCCCAAGTGCCTGTAATCCC...AAACTTAGAGGTACTGTTAGGCAGCTGCCCTAGGGATGACTGCTCCTTTATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333449.9 |
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| 3UTR CCA 72 bp | GCTCCACTCAGGGTCACCCCTCTCCAGAGGCCGGTATaGGGTGGCTTCAGACTTCCACTGCACGACCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: APLRVTPLQRPV*GGFRLPLHDLE Trigger: CTCCAGGTCGTGCAGTGGAAGTCTGAAGCCACCCCATACCGGCCTCTGGAGAGGGGTGACCCTGAGTGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| 3UTR CCA 72 bp | ACTCAGGGTCACCCCTCTCCAGAGGCCGGTATGGGGTaGCTTCAGACTTCCACTGCACGACCTGGAGCACCA | + |
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Preference number: 3 (lower is better) Translates to: TQGHPSPEAGMG*LQTSTARPGAP Trigger: TGGTGCTCCAGGTCGTGCAGTGGAAGTCTGAAGCCACCCCATACCGGCCTCTGGAGAGGGGTGACCCTGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| 3UTR GCA 72 bp | TCCAGAGGCCGGTATGGGGTGGCTTCAGACTTCCACTaGACGACCTGGAGCACCAAGACCACACACCACAAT | + |
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Preference number: 3 (lower is better) Translates to: SRGRYGVASDFH*TTWSTKTTHHN Trigger: ATTGTGGTGTGTGGTCTTGGTGCTCCAGGTCGTGCAGTGGAAGTCTGAAGCCACCCCATACCGGCCTCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| 3UTR GCA 72 bp | GGGGGATTACAGGCACTTGGGCATGGAGTCTTCGGCTaGAGGAAGCACTCCGCTTATTCTTCAGGAATGGGA | + |
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Preference number: 3 (lower is better) Translates to: GGLQALGHGVFG*RKHSAYSSGMG Trigger: TCCCATTCCTGAAGAATAAGCGGAGTGCTTCCTGCAGCCGAAGACTCCATGCCCAAGTGCCTGTAATCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| 3UTR TCA 72 bp | AAGCACTCCGCTTATTCTTCAGGAATGGGAAAGGCGTaGCCCAACGAGAGCATCTGTCTCAGAGCTCCACTC | + |
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Preference number: 3 (lower is better) Translates to: KHSAYSSGMGKA*PNESICLRAPL Trigger: GAGTGGAGCTCTGAGACAGATGCTCTCGTTGGGTCACGCCTTTCCCATTCCTGAAGAATAAGCGGAGTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| CDS-3UTR GCA 90 bp | GGGGATTACAGGCACTTGGGCATGGAGTCTTCGGCTGCAGGAAGCACTCCGCTTGCAAGCTCGACGCGCTaGAGCCAGGACAGCGCCATG | + |
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Preference number: 4 (lower is better) Translates to: GDYRHLGMESSAAGSTPLASSTR*SQDSAM Trigger: CATGGCGCTGTCCTGGCTGCAGCGCGTCGAGCTTGC...AAGCGGAGTGCTTCCTGCAGCCGAAGACTCCATGCCCAAGTGCCTGTAATCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333449.9 ENST00000533861.5 |
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| CDS-3UTR CCA 90 bp | GGGGATTACAGGCACTTGGGCATGGAGTCTTCGGCTGCAGGAAGCACTCCGCTTGCCAGGACAGCGCCATaGCGCCCTGACCACCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: GDYRHLGMESSAAGSTPLARTAP*RPDHQE Trigger: TTCCTGGTGGTCAGGGCGCCATGGCGCTGTCCTGGC...AAGCGGAGTGCTTCCTGCAGCCGAAGACTCCATGCCCAAGTGCCTGTAATCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333449.9 |
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| CDS-3UTR CCA 90 bp | GAGCTCCACTCAGGGTCACCCCTCTCCAGAGGCCGGTATGGGGTGGCTTCAGACGAGGCCGGTATGGGGTaGCTTCAGACTTCCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: ELHSGSPLSRGRYGVASDEAGMG*LQTSTA Trigger: TGCAGTGGAAGTCTGAAGCCACCCCATACCGGCCTC...GTCTGAAGCCACCCCATACCGGCCTCTGGAGAGGGGTGACCCTGAGTGGAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| CDS-3UTR TCA 90 bp | TCAGAGCTCCACTCAGGGTCACCCCTCTCCAGAGGCCGGTATGGGGTGGCTTCAGAAGACGGCTATAGCTaGGATGGCCAGTGCAATGCG | + |
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Preference number: 4 (lower is better) Translates to: SELHSGSPLSRGRYGVASEDGYS*DGQCNA Trigger: CGCATTGCACTGGCCATCTCAGCTATAGCCGTCTTC...TGAAGCCACCCCATACCGGCCTCTGGAGAGGGGTGACCCTGAGTGGAGCTCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| CDS-3UTR CCA 90 bp | GGAGTCTTCGGCTGCAGGAAGCACTCCGCTTATTCTTCAGGAATGGGAAAGGCGCCACTGAAGGAGCCCTaGGTCCGAGTCATCGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: GVFGCRKHSAYSSGMGKAPLKEP*VRVIAA Trigger: CGCGGCGATGACTCGGACCCAGGGCTCCTTCAGTGG...CGCCTTTCCCATTCCTGAAGAATAAGCGGAGTGCTTCCTGCAGCCGAAGACTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| CDS-3UTR CCA 90 bp | TCTGTCTCAGAGCTCCACTCAGGGTCACCCCTCTCCAGAGGCCGGTATGGGGTGTTCCACTGCACGACCTaGAGCACCAAGACCACACAC | + |
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Preference number: 4 (lower is better) Translates to: SVSELHSGSPLSRGRYGVFHCTT*STKTTH Trigger: GTGTGTGGTCTTGGTGCTCCAGGTCGTGCAGTGGAA...CACCCCATACCGGCCTCTGGAGAGGGGTGACCCTGAGTGGAGCTCTGAGACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| CDS-3UTR CCA 90 bp | TCTCAGAGCTCCACTCAGGGTCACCCCTCTCCAGAGGCCGGTATGGGGTGGCTTACAGGCACTTGGGCATaGAGTCTTCGGCTGCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: SQSSTQGHPSPEAGMGWLTGTWA*SLRLQE Trigger: TTCCTGCAGCCGAAGACTCCATGCCCAAGTGCCTGT...AAGCCACCCCATACCGGCCTCTGGAGAGGGGTGACCCTGAGTGGAGCTCTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| CDS-3UTR CCA 90 bp | AGAGCTCCACTCAGGGTCACCCCTCTCCAGAGGCCGGTATGGGGTGGCTTCAGAGGGATTACAGGCACTTaGGCATGGAGTCTTCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: RAPLRVTPLQRPVWGGFRGITGT*AWSLRL Trigger: CAGCCGAAGACTCCATGCCCAAGTGCCTGTAATCCC...TCTGAAGCCACCCCATACCGGCCTCTGGAGAGGGGTGACCCTGAGTGGAGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| CDS-3UTR TCA 90 bp | CAGTCATCCCTAGGGCAGCTGCCTAACAGTACCTCTAAGTTTCAGTCCATGTCTAGCGCCATGGCGCCCTaGCCACCAGGAAGCGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: QSSLGQLPNSTSKFQSMSSAMAP*PPGSAA Trigger: AGCGGCGCTTCCTGGTGGTCAGGGCGCCATGGCGCT...AGACATGGACTGAAACTTAGAGGTACTGTTAGGCAGCTGCCCTAGGGATGACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333449.9 |
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| CDS-3UTR GCA 90 bp | TCAGGGTCACCCCTCTCCAGAGGCCGGTATGGGGTGGCTTCAGACTTCCACTGCCATGGAGTCTTCGGCTaGAGGAAGCACTCCGCTTAT | + |
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Preference number: 4 (lower is better) Translates to: SGSPLSRGRYGVASDFHCHGVFG*RKHSAY Trigger: ATAAGCGGAGTGCTTCCTGCAGCCGAAGACTCCATG...GCAGTGGAAGTCTGAAGCCACCCCATACCGGCCTCTGGAGAGGGGTGACCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| CDS-3UTR GCA 90 bp | AGAGCTCCACTCAGGGTCACCCCTCTCCAGAGGCCGGTATGGGGTGGCTTCAGATGGTACAAAAACAGCTaGAGGAAGAGGTGGAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: RAPLRVTPLQRPVWGGFRWYKNS*RKRWRG Trigger: CCCCCTCCACCTCTTCCTGCAGCTGTTTTTGTACCA...TCTGAAGCCACCCCATACCGGCCTCTGGAGAGGGGTGACCCTGAGTGGAGCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| CDS-3UTR GCA 90 bp | TCAGGGTCACCCCTCTCCAGAGGCCGGTATGGGGTGGCTTCAGACTTCCACTGCAGTCCTCGATGCAGCTaGTGTAGATCCAGAAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: SGSPLSRGRYGVASDFHCSPRCS*CRSRRA Trigger: TGCTCTTCTGGATCTACAGCAGCTGCATCGAGGACT...GCAGTGGAAGTCTGAAGCCACCCCATACCGGCCTCTGGAGAGGGGTGACCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| CDS-3UTR CCA 90 bp | GGGCATGGAGTCTTCGGCTGCAGGAAGCACTCCGCTTATTCTTCAGGAATGGGACTCCAGAGGCCGGTATaGGGTGGCTTCAGACTTCCA | + |
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Preference number: 4 (lower is better) Translates to: GHGVFGCRKHSAYSSGMGLQRPV*GGFRLP Trigger: TGGAAGTCTGAAGCCACCCCATACCGGCCTCTGGAG...TCCCATTCCTGAAGAATAAGCGGAGTGCTTCCTGCAGCCGAAGACTCCATGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| CDS-3UTR TCA 90 bp | GGATTACAGGCACTTGGGCATGGAGTCTTCGGCTGCAGGAAGCACTCCGCTTATGAAGACGGCTATAGCTaGGATGGCCAGTGCAATGCG | + |
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Preference number: 4 (lower is better) Translates to: GLQALGHGVFGCRKHSAYEDGYS*DGQCNA Trigger: CGCATTGCACTGGCCATCTCAGCTATAGCCGTCTTC...ATAAGCGGAGTGCTTCCTGCAGCCGAAGACTCCATGCCCAAGTGCCTGTAATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333449.9 ENST00000533861.5 |
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| CDS-3UTR GCA 90 bp | AGCTGCCTAACAGTACCTCTAAGTTTCAGTCCATGTCTGCTTAGCCTTCACTCCGCAAGCTCGACGCGCTaGAGCCAGGACAGCGCCATG | + |
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Preference number: 4 (lower is better) Translates to: SCLTVPLSFSPCLLSLHSASSTR*SQDSAM Trigger: CATGGCGCTGTCCTGGCTGCAGCGCGTCGAGCTTGC...GGAGTGAAGGCTAAGCAGACATGGACTGAAACTTAGAGGTACTGTTAGGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333449.9 |
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| CDS-3UTR CCA 90 bp | GAGGCCGGTATGGGGTGGCTTCAGACTTCCACTGCACGACCTGGAGCACCAAGAAGTTGCAGAGAGACCTaGTGCCAAATCGAAGGATAC | + |
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Preference number: 4 (lower is better) Translates to: EAGMGWLQTSTARPGAPRSCRET*CQIEGY Trigger: GTATCCTTCGATTTGGCACCAGGTCTCTCTGCAACT...TCTTGGTGCTCCAGGTCGTGCAGTGGAAGTCTGAAGCCACCCCATACCGGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| CDS-3UTR CCA 90 bp | ATTACAGGCACTTGGGCATGGAGTCTTCGGCTGCAGGAAGCACTCCGCTTATTCGAGGCCGGTATGGGGTaGCTTCAGACTTCCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: ITGTWAWSLRLQEALRLFEAGMG*LQTSTA Trigger: TGCAGTGGAAGTCTGAAGCCACCCCATACCGGCCTC...GAATAAGCGGAGTGCTTCCTGCAGCCGAAGACTCCATGCCCAAGTGCCTGTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333449.9 ENST00000533861.5 |
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| CDS-3UTR CCA 90 bp | CTAACAGTACCTCTAAGTTTCAGTCCATGTCTGCTTAGCCTTCACTCCTTCCTCCCACTGAAGGAGCCCTaGGTCCGAGTCATCGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: LTVPLSFSPCLLSLHSFLPLKEP*VRVIAA Trigger: CGCGGCGATGACTCGGACCCAGGGCTCCTTCAGTGG...GAGGAAGGAGTGAAGGCTAAGCAGACATGGACTGAAACTTAGAGGTACTGTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333449.9 |
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| CDS-3UTR CCA 90 bp | ATTACAGGCACTTGGGCATGGAGTCTTCGGCTGCAGGAAGCACTCCGCTTATTCCCTATAGCACCTCTGTaGGAGTCCTCGATGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: ITGTWAWSLRLQEALRLFPIAPL*ESSMQL Trigger: CAGCTGCATCGAGGACTCCCACAGAGGTGCTATAGG...GAATAAGCGGAGTGCTTCCTGCAGCCGAAGACTCCATGCCCAAGTGCCTGTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333449.9 ENST00000533861.5 |
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| CDS-3UTR CCA 90 bp | GGGGATTACAGGCACTTGGGCATGGAGTCTTCGGCTGCAGGAAGCACTCCGCTTAGTTGCAGAGAGACCTaGTGCCAAATCGAAGGATAC | + |
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Preference number: 4 (lower is better) Translates to: GDYRHLGMESSAAGSTPLSCRET*CQIEGY Trigger: GTATCCTTCGATTTGGCACCAGGTCTCTCTGCAACT...AAGCGGAGTGCTTCCTGCAGCCGAAGACTCCATGCCCAAGTGCCTGTAATCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333449.9 ENST00000533861.5 |
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| CDS-3UTR TCA 90 bp | TCACTGGTAGGCCAAGCTCACAATACACTGGTGAGCACCCACACAGCTACAGATGAAGACGGCTATAGCTaGGATGGCCAGTGCAATGCG | + |
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Preference number: 4 (lower is better) Translates to: SLVGQAHNTLVSTHTATDEDGYS*DGQCNA Trigger: CGCATTGCACTGGCCATCTCAGCTATAGCCGTCTTC...ATCTGTAGCTGTGTGGGTGCTCACCAGTGTATTGTGAGCTTGGCCTACCAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000526546.1 |
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| CDS-3UTR GCA 90 bp | CCTTCAGCTCCTCTCACTGGTAGGCCAAGCTCACAATACACTGGTGAGCACCCATGCAGAGAGACCTGGTaGCAAATCGAAGGATACAGG | + |
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Preference number: 4 (lower is better) Translates to: PSAPLTGRPSSQYTGEHPCRETW*QIEGYR Trigger: CCTGTATCCTTCGATTTGGCACCAGGTCTCTCTGCA...TGGGTGCTCACCAGTGTATTGTGAGCTTGGCCTACCAGTGAGAGGAGCTGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000526546.1 |
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| CDS-3UTR GCA 90 bp | AAGGAGCAGTCATCCCTAGGGCAGCTGCCTAACAGTACCTCTAAGTTTCAGTCCGCTTCAGACTTCCACTaGACGACCTGGAGCACCAAG | + |
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Preference number: 4 (lower is better) Translates to: KEQSSLGQLPNSTSKFQSASDFH*TTWSTK Trigger: CTTGGTGCTCCAGGTCGTGCAGTGGAAGTCTGAAGC...GGACTGAAACTTAGAGGTACTGTTAGGCAGCTGCCCTAGGGATGACTGCTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333449.9 |
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| CDS-3UTR GCA 90 bp | ACTTGGGCATGGAGTCTTCGGCTGCAGGAAGCACTCCGCTTATTCTTCAGGAATGCTTCAGACTTCCACTaGACGACCTGGAGCACCAAG | + |
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Preference number: 4 (lower is better) Translates to: TWAWSLRLQEALRLFFRNASDFH*TTWSTK Trigger: CTTGGTGCTCCAGGTCGTGCAGTGGAAGTCTGAAGC...ATTCCTGAAGAATAAGCGGAGTGCTTCCTGCAGCCGAAGACTCCATGCCCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| CDS-3UTR CCA 90 bp | ACCCCTTCAGCTCCTCTCACTGGTAGGCCAAGCTCACAATACACTGGTGAGCACTCCAGGGGGTGTCCATaGAATTTTCTGGGCTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: TPSAPLTGRPSSQYTGEHSRGCP*NFLGFR Trigger: TCTGAAGCCCAGAAAATTCCATGGACACCCCCTGGA...GTGCTCACCAGTGTATTGTGAGCTTGGCCTACCAGTGAGAGGAGCTGAAGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000526546.1 |
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| CDS-3UTR CCA 90 bp | AAGGAGCAGTCATCCCTAGGGCAGCTGCCTAACAGTACCTCTAAGTTTCAGTCCTTCCACTGCACGACCTaGAGCACCAAGACCACACAC | + |
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Preference number: 4 (lower is better) Translates to: KEQSSLGQLPNSTSKFQSFHCTT*STKTTH Trigger: GTGTGTGGTCTTGGTGCTCCAGGTCGTGCAGTGGAA...GGACTGAAACTTAGAGGTACTGTTAGGCAGCTGCCCTAGGGATGACTGCTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333449.9 |
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| CDS-3UTR CCA 90 bp | CAGTCATCCCTAGGGCAGCTGCCTAACAGTACCTCTAAGTTTCAGTCCATGTCTCTCCAGAGGCCGGTATaGGGTGGCTTCAGACTTCCA | + |
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Preference number: 4 (lower is better) Translates to: QSSLGQLPNSTSKFQSMSLQRPV*GGFRLP Trigger: TGGAAGTCTGAAGCCACCCCATACCGGCCTCTGGAG...AGACATGGACTGAAACTTAGAGGTACTGTTAGGCAGCTGCCCTAGGGATGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333449.9 |
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| CDS-3UTR CCA 90 bp | AAGGAGCAGTCATCCCTAGGGCAGCTGCCTAACAGTACCTCTAAGTTTCAGTCCGGGATTACAGGCACTTaGGCATGGAGTCTTCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KEQSSLGQLPNSTSKFQSGITGT*AWSLRL Trigger: CAGCCGAAGACTCCATGCCCAAGTGCCTGTAATCCC...GGACTGAAACTTAGAGGTACTGTTAGGCAGCTGCCCTAGGGATGACTGCTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333449.9 |
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| CDS-3UTR GCA 90 bp | AAGGAGCAGTCATCCCTAGGGCAGCTGCCTAACAGTACCTCTAAGTTTCAGTCCTGGTACAAAAACAGCTaGAGGAAGAGGTGGAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: KEQSSLGQLPNSTSKFQSWYKNS*RKRWRG Trigger: CCCCCTCCACCTCTTCCTGCAGCTGTTTTTGTACCA...GGACTGAAACTTAGAGGTACTGTTAGGCAGCTGCCCTAGGGATGACTGCTCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333449.9 |
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| CDS-3UTR GCA 90 bp | GGATTACAGGCACTTGGGCATGGAGTCTTCGGCTGCAGGAAGCACTCCGCTTATGTTTCAGTCCATGTCTaGTTAGCCTTCACTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: GLQALGHGVFGCRKHSAYVSVHV*LAFTPS Trigger: GGAAGGAGTGAAGGCTAAGCAGACATGGACTGAAAC...ATAAGCGGAGTGCTTCCTGCAGCCGAAGACTCCATGCCCAAGTGCCTGTAATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333449.9 |
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| CDS-3UTR CCA 90 bp | ACTGGTAGGCCAAGCTCACAATACACTGGTGAGCACCCACACAGCTACAGATATCCTATAGCACCTCTGTaGGAGTCCTCGATGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: TGRPSSQYTGEHPHSYRYPIAPL*ESSMQL Trigger: CAGCTGCATCGAGGACTCCCACAGAGGTGCTATAGG...ATATCTGTAGCTGTGTGGGTGCTCACCAGTGTATTGTGAGCTTGGCCTACCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000526546.1 |
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| CDS-3UTR TCA 90 bp | CTGAATTTTAAGCTGACAACCCCTTCAGCTCCTCTCACTGGTAGGCCAAGCTCACTCACAATACACTGGTaGGCACCCACACAGCTACAG | + |
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Preference number: 4 (lower is better) Translates to: LNFKLTTPSAPLTGRPSSLTIHW*APTQLQ Trigger: CTGTAGCTGTGTGGGTGCTCACCAGTGTATTGTGAG...TGAGCTTGGCCTACCAGTGAGAGGAGCTGAAGGGGTTGTCAGCTTAAAATTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000526546.1 |
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| CDS-3UTR GCA 90 bp | ACTTGGGCATGGAGTCTTCGGCTGCAGGAAGCACTCCGCTTATTCTTCAGGAATTGCAGAGAGACCTGGTaGCAAATCGAAGGATACAGG | + |
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Preference number: 4 (lower is better) Translates to: TWAWSLRLQEALRLFFRNCRETW*QIEGYR Trigger: CCTGTATCCTTCGATTTGGCACCAGGTCTCTCTGCA...ATTCCTGAAGAATAAGCGGAGTGCTTCCTGCAGCCGAAGACTCCATGCCCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| CDS-3UTR TCA 90 bp | CTAACAGTACCTCTAAGTTTCAGTCCATGTCTGCTTAGCCTTCACTCCTTCCTCGGAATGGGAAAGGCGTaGCCCAACGAGAGCATCTGT | + |
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Preference number: 4 (lower is better) Translates to: LTVPLSFSPCLLSLHSFLGMGKA*PNESIC Trigger: ACAGATGCTCTCGTTGGGTCACGCCTTTCCCATTCC...GAGGAAGGAGTGAAGGCTAAGCAGACATGGACTGAAACTTAGAGGTACTGTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333449.9 |
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| CDS-3UTR CCA 90 bp | CAGTCATCCCTAGGGCAGCTGCCTAACAGTACCTCTAAGTTTCAGTCCATGTCTTCCAGGGGGTGTCCATaGAATTTTCTGGGCTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: QSSLGQLPNSTSKFQSMSSRGCP*NFLGFR Trigger: TCTGAAGCCCAGAAAATTCCATGGACACCCCCTGGA...AGACATGGACTGAAACTTAGAGGTACTGTTAGGCAGCTGCCCTAGGGATGACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000333449.9 |
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| CDS-3UTR CCA 90 bp | TCAGCTCCTCTCACTGGTAGGCCAAGCTCACAATACACTGGTGAGCACCCACACTTTTCCTCCTATCCTTaGGTCTCACTTCAGCATTGT | + |
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Preference number: 4 (lower is better) Translates to: SAPLTGRPSSQYTGEHPHFSSYP*VSLQHC Trigger: ACAATGCTGAAGTGAGACCCAAGGATAGGAGGAAAA...GTGTGGGTGCTCACCAGTGTATTGTGAGCTTGGCCTACCAGTGAGAGGAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526546.1 |
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| CDS-3UTR GCA 90 bp | AGCTGCCTAACAGTACCTCTAAGTTTCAGTCCATGTCTGCTTAGCCTTCACTCCAGTCCTCGATGCAGCTaGTGTAGATCCAGAAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: SCLTVPLSFSPCLLSLHSSPRCS*CRSRRA Trigger: TGCTCTTCTGGATCTACAGCAGCTGCATCGAGGACT...GGAGTGAAGGCTAAGCAGACATGGACTGAAACTTAGAGGTACTGTTAGGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333449.9 |
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| CDS-3UTR GCA 90 bp | CAAATAAAGGAGCAGTCATCCCTAGGGCAGCTGCCTAACAGTACCTCTAAGTTTTGTGGGAGTCCTCGATaGAGCTGCTGTAGATCCAGA | + |
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Preference number: 4 (lower is better) Translates to: QIKEQSSLGQLPNSTSKFCGSPR*SCCRSR Trigger: TCTGGATCTACAGCAGCTGCATCGAGGACTCCCACA...AAACTTAGAGGTACTGTTAGGCAGCTGCCCTAGGGATGACTGCTCCTTTATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333449.9 |
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| CDS-3UTR GCA 90 bp | CAAATAAAGGAGCAGTCATCCCTAGGGCAGCTGCCTAACAGTACCTCTAAGTTTCATGGAGTCTTCGGCTaGAGGAAGCACTCCGCTTAT | + |
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Preference number: 4 (lower is better) Translates to: QIKEQSSLGQLPNSTSKFHGVFG*RKHSAY Trigger: ATAAGCGGAGTGCTTCCTGCAGCCGAAGACTCCATG...AAACTTAGAGGTACTGTTAGGCAGCTGCCCTAGGGATGACTGCTCCTTTATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333449.9 |
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| CDS-3UTR GCA 90 bp | CAAATAAAGGAGCAGTCATCCCTAGGGCAGCTGCCTAACAGTACCTCTAAGTTTTGCAGAGAGACCTGGTaGCAAATCGAAGGATACAGG | + |
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Preference number: 4 (lower is better) Translates to: QIKEQSSLGQLPNSTSKFCRETW*QIEGYR Trigger: CCTGTATCCTTCGATTTGGCACCAGGTCTCTCTGCA...AAACTTAGAGGTACTGTTAGGCAGCTGCCCTAGGGATGACTGCTCCTTTATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333449.9 |
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| CDS-3UTR CCA 90 bp | AATTTTAAGCTGACAACCCCTTCAGCTCCTCTCACTGGTAGGCCAAGCTCACAAAGTTGCAGAGAGACCTaGTGCCAAATCGAAGGATAC | + |
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Preference number: 4 (lower is better) Translates to: NFKLTTPSAPLTGRPSSQSCRET*CQIEGY Trigger: GTATCCTTCGATTTGGCACCAGGTCTCTCTGCAACT...TTGTGAGCTTGGCCTACCAGTGAGAGGAGCTGAAGGGGTTGTCAGCTTAAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000526546.1 |
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| CDS-3UTR CCA 90 bp | AAGGAGCAGTCATCCCTAGGGCAGCTGCCTAACAGTACCTCTAAGTTTCAGTCCGTCCATGGAATTTTCTaGGCTTCAGAACAGCTAATT | + |
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Preference number: 4 (lower is better) Translates to: KEQSSLGQLPNSTSKFQSVHGIF*ASEQLI Trigger: AATTAGCTGTTCTGAAGCCCAGAAAATTCCATGGAC...GGACTGAAACTTAGAGGTACTGTTAGGCAGCTGCCCTAGGGATGACTGCTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333449.9 |
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| CDS-3UTR CCA 90 bp | AAGCTGACAACCCCTTCAGCTCCTCTCACTGGTAGGCCAAGCTCACAATACACTGTCCATGGAATTTTCTaGGCTTCAGAACAGCTAATT | + |
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Preference number: 4 (lower is better) Translates to: KLTTPSAPLTGRPSSQYTVHGIF*ASEQLI Trigger: AATTAGCTGTTCTGAAGCCCAGAAAATTCCATGGAC...AGTGTATTGTGAGCTTGGCCTACCAGTGAGAGGAGCTGAAGGGGTTGTCAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000526546.1 |
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| CDS-3UTR CCA 90 bp | AATTTTAAGCTGACAACCCCTTCAGCTCCTCTCACTGGTAGGCCAAGCTCACAACAGCATTGTGTAGGTTaGAGTAAAACTGCAGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: NFKLTTPSAPLTGRPSSQQHCVG*SKTAEQ Trigger: CTGCTCTGCAGTTTTACTCCAACCTACACAATGCTG...TTGTGAGCTTGGCCTACCAGTGAGAGGAGCTGAAGGGGTTGTCAGCTTAAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000526546.1 |
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| CDS-3UTR CCA 90 bp | CAAATAAAGGAGCAGTCATCCCTAGGGCAGCTGCCTAACAGTACCTCTAAGTTTCAGCATTGTGTAGGTTaGAGTAAAACTGCAGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: QIKEQSSLGQLPNSTSKFQHCVG*SKTAEQ Trigger: CTGCTCTGCAGTTTTACTCCAACCTACACAATGCTG...AAACTTAGAGGTACTGTTAGGCAGCTGCCCTAGGGATGACTGCTCCTTTATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333449.9 |
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| CDS GCA 90 bp | TCACCCCTCTCCAGAGGCCGGTATGGGGTGGCTTCAGACTTCCACTaGACGACCTGGAGCACCAAGACCACACACCACAATACCAAATTC | + |
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Preference number: 5 (lower is better) Translates to: SPLSRGRYGVASDFH*TTWSTKTTHHNTKF Trigger: GAATTTGGTATTGTGGTGTGTGGTCTTGGTGCTCCAGGTCGTGCAGTGGAAGTCTGAAGCCACCCCATACCGGCCTCTGGAGAGGGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000333449.9 ENST00000532345.1 ENST00000532586.1 ENST00000533861.5 |
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| CDS TCA 90 bp | TCGAAGGATACAGGCAGACACCAAGACCAGGAAGACGGCTATAGCTaGGATGGCCAGTGCAATGCGCAGCCCTATAGCACCTCTGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: SKDTGRHQDQEDGYS*DGQCNAQPYSTSVG Trigger: TCCCACAGAGGTGCTATAGGGCTGCGCATTGCACTGGCCATCTCAGCTATAGCCGTCTTCCTGGTCTTGGTGTCTGCCTGTATCCTTCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000333449.9 ENST00000526546.1 ENST00000532586.1 ENST00000533861.5 |
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| CDS TCA 90 bp | TCGAAGGATACAGGCAGACACCAAGACCAGGAAGACGGCTATAGCTaGGATGGCCAGTGCAATGCGCAGCCCTATAGCACCTCTGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: SKDTGRHQDQEDGYS*DGQCNAQPYSTSER Trigger: CCTTTCAGAGGTGCTATAGGGCTGCGCATTGCACTGGCCATCTCAGCTATAGCCGTCTTCCTGGTCTTGGTGTCTGCCTGTATCCTTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532345.1 |
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| CDS CCA 90 bp | TCCAGAGGCCGGTATGGGGTGGCTTCAGACTTCCACTGCACGACCTaGAGCACCAAGACCACACACCACAATACCAAATTCACCCAAGAA | + |
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Preference number: 5 (lower is better) Translates to: SRGRYGVASDFHCTT*STKTTHHNTKFTQE Trigger: TTCTTGGGTGAATTTGGTATTGTGGTGTGTGGTCTTGGTGCTCCAGGTCGTGCAGTGGAAGTCTGAAGCCACCCCATACCGGCCTCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000333449.9 ENST00000532345.1 ENST00000532586.1 ENST00000533861.5 |
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| CDS CCA 90 bp | ACCCAAGAAGAGGTCTGTAGGAGACAGGGACAGGATCGTCAGGAGTaGGACCATTTCAAATCCAGTCCTTCCCACCCACACACCACTCTG | + |
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Preference number: 5 (lower is better) Translates to: TQEEVCRRQGQDRQE*DHFKSSPSHPHTTL Trigger: CAGAGTGGTGTGTGGGTGGGAAGGACTGGATTTGAAATGGTCCCACTCCTGACGATCCTGTCCCTGTCTCCTACAGACCTCTTCTTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532586.1 |
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| CDS TCA 90 bp | AATTTTCTGGGCTTCAGAACAGCTGTGAGGTCAAAGAGACAGTTGTaGGAAAGCGTGATAGTTTATATCCGAGGCACACCTGTGCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: NFLGFRTAVRSKRQL*ESVIVYIRGTPVPS Trigger: ACTGGGCACAGGTGTGCCTCGGATATAAACTATCACGCTTTCTCACAACTGTCTCTTTGACCTCACAGCTGTTCTGAAGCCCAGAAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532345.1 |
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| CDS-3UTR CAA 90 bp | GTAGGCCAAGCTCACAATACACTGGTGAGCACCCACACAGCTACAGATATTTATTTTTTCCTCCTATCCTaGGGTCTCACTTCAGCATTG | + |
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Preference number: 5 (lower is better) Translates to: VGQAHNTLVSTHTATDIYFFLLS*GLTSAL Trigger: CAATGCTGAAGTGAGACCCAAGGATAGGAGGAAAAA...ATAAATATCTGTAGCTGTGTGGGTGCTCACCAGTGTATTGTGAGCTTGGCCTAC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000526546.1 |
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| CDS CCA 72 bp | GAGGTCTGTAGGAGACAGGGACAGGATCGTCAGGAGTaGGACCATTTCAAATCCAGTCCTTCCCACCCACAC | + |
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Preference number: 6 (lower is better) Translates to: EVCRRQGQDRQE*DHFKSSPSHPH Trigger: GTGTGGGTGGGAAGGACTGGATTTGAAATGGTCCCACTCCTGACGATCCTGTCCCTGTCTCCTACAGACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532586.1 |
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| CDS CCA 72 bp | CGGTATGGGGTGGCTTCAGACTTCCACTGCACGACCTaGAGCACCAAGACCACACACCACAATACCAAATTC | + |
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Preference number: 6 (lower is better) Translates to: RYGVASDFHCTT*STKTTHHNTKF Trigger: GAATTTGGTATTGTGGTGTGTGGTCTTGGTGCTCCAGGTCGTGCAGTGGAAGTCTGAAGCCACCCCATACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000333449.9 ENST00000532345.1 ENST00000532586.1 ENST00000533861.5 |
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| CDS CCA 72 bp | TCCTATCCTTGGGTCTCACTTCAGCATTGTGTAGGTTaGAGTAAAACTGCAGAGCAGTTCCAGGGGGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SYPWVSLQHCVG*SKTAEQFQGVS Trigger: GGACACCCCCTGGAACTGCTCTGCAGTTTTACTCCAACCTACACAATGCTGAAGTGAGACCCAAGGATAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000526546.1 ENST00000532586.1 |
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| CDS CAA 90 bp | TGGGCTTCAGAACAGCTAATTGTAGTGTTCAAGGAGATGATGGAGTaGCAGAGAGACCTGGTGCCAAATCGAAGGATACAGGCAGACACC | + |
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Preference number: 6 (lower is better) Translates to: WASEQLIVVFKEMME*QRDLVPNRRIQADT Trigger: GGTGTCTGCCTGTATCCTTCGATTTGGCACCAGGTCTCTCTGCAACTCCATCATCTCCTTGAACACTACAATTAGCTGTTCTGAAGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000333449.9 ENST00000526546.1 ENST00000532586.1 |
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| CDS CAA 90 bp | TCCCTCTCCCATTACCTAATTGTAGTGTTCAAGGAGATGATGGAGTaGCAGAGAGACCTGGTGCCAAATCGAAGGATACAGGCAGACACC | + |
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Preference number: 6 (lower is better) Translates to: SLSHYLIVVFKEMME*QRDLVPNRRIQADT Trigger: GGTGTCTGCCTGTATCCTTCGATTTGGCACCAGGTCTCTCTGCAACTCCATCATCTCCTTGAACACTACAATTAGGTAATGGGAGAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532345.1 |
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| CDS CAA 90 bp | CACCCAAGAAGAGGTCTAATTGTAGTGTTCAAGGAGATGATGGAGTaGCAGAGAGACCTGGTGCCAAATCGAAGGATACAGGCAGACACC | + |
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Preference number: 6 (lower is better) Translates to: HPRRGLIVVFKEMME*QRDLVPNRRIQADT Trigger: GGTGTCTGCCTGTATCCTTCGATTTGGCACCAGGTCTCTCTGCAACTCCATCATCTCCTTGAACACTACAATTAGACCTCTTCTTGGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| CDS TCA 72 bp | GGCTTCAGAACAGCTGTGAGGTCAAAGAGACAGTTGTaGGAAAGCGTGATAGTTTATATCCGAGGCACACCT | + |
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Preference number: 6 (lower is better) Translates to: GFRTAVRSKRQL*ESVIVYIRGTP Trigger: AGGTGTGCCTCGGATATAAACTATCACGCTTTCTCACAACTGTCTCTTTGACCTCACAGCTGTTCTGAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532345.1 |
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| CDS CAA 72 bp | GAACAGCTAATTGTAGTGTTCAAGGAGATGATGGAGTaGCAGAGAGACCTGGTGCCAAATCGAAGGATACAG | + |
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Preference number: 6 (lower is better) Translates to: EQLIVVFKEMME*QRDLVPNRRIQ Trigger: CTGTATCCTTCGATTTGGCACCAGGTCTCTCTGCAACTCCATCATCTCCTTGAACACTACAATTAGCTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000333449.9 ENST00000526546.1 ENST00000532586.1 |
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| CDS CAA 72 bp | AGAGGTCTAATTGTAGTGTTCAAGGAGATGATGGAGTaGCAGAGAGACCTGGTGCCAAATCGAAGGATACAG | + |
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Preference number: 6 (lower is better) Translates to: RGLIVVFKEMME*QRDLVPNRRIQ Trigger: CTGTATCCTTCGATTTGGCACCAGGTCTCTCTGCAACTCCATCATCTCCTTGAACACTACAATTAGACCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533861.5 |
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| CDS CAA 72 bp | CATTACCTAATTGTAGTGTTCAAGGAGATGATGGAGTaGCAGAGAGACCTGGTGCCAAATCGAAGGATACAG | + |
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Preference number: 6 (lower is better) Translates to: HYLIVVFKEMME*QRDLVPNRRIQ Trigger: CTGTATCCTTCGATTTGGCACCAGGTCTCTCTGCAACTCCATCATCTCCTTGAACACTACAATTAGGTAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532345.1 |
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