RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM178B (Homo sapiens)

Ensembl gene IDs: ENSG00000261115

Ensembl transcript IDs: ENST00000563442.1, ENST00000565468.6, ENST00000610315.1

Found 1104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACACCCACACACACACATCACAGCATGACTCCAAGGCTCCAGTCTaGCCAGGGAGTGCAGGTGCGGCTGGGGACAGGGTGGCCTCTTGT +
Preference number: 1 (lower is better)
Translates to: HTHTHTSQHDSKAPV*PGSAGAAGDRVASC
Trigger: ACAAGAGGCCACCCTGTCCCCAGCCGCACCTGCACTCCCTGGGCAGACTGGAGCCTTGGAGTCATGCTGTGATGTGTGTGTGTGGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 90 bp AGGCTCCAGTCTGCCCAGGGAGTGCAGGTGCGGCTGGGGACAGGGTaGCCTCTTGTTTCACTGGGTGTAAGGCAGCTGGAAGGTAAGACT +
Preference number: 1 (lower is better)
Translates to: RLQSAQGVQVRLGTG*PLVSLGVRQLEGKT
Trigger: AGTCTTACCTTCCAGCTGCCTTACACCCAGTGAAACAAGAGGCCACCCTGTCCCCAGCCGCACCTGCACTCCCTGGGCAGACTGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 90 bp ACGTGGAGACAAGGTGAGGTAATGAGACTCCCCCAAGGCCCTGAGTaGGCCGGTGACAGGGCCACTCATGCCACCCCAGAGTCAGGTCTT +
Preference number: 1 (lower is better)
Translates to: TWRQGEVMRLPQGPE*AGDRATHATPESGL
Trigger: AAGACCTGACTCTGGGGTGGCATGAGTGGCCCTGTCACCGGCTCACTCAGGGCCTTGGGGGAGTCTCATTACCTCACCTTGTCTCCACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 90 bp TGGGTCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTaGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGAT +
Preference number: 1 (lower is better)
Translates to: WVTGQARRASPLWGS*SSQSCRETAVYAAD
Trigger: ATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 90 bp GCACTCTTGCTGCCAGGAACACAGGGTCAACTCAACGCAGACCAGTaGGGTTCTGTGGTGTACACTGCTCACATGGCCCCAGCTGCCAAC +
Preference number: 1 (lower is better)
Translates to: ALLLPGTQGQLNADQ*GSVVYTAHMAPAAN
Trigger: GTTGGCAGCTGGGGCCATGTGAGCAGTGTACACCACAGAACCGCACTGGTCTGCGTTGAGTTGACCCTGTGTTCCTGGCAGCAAGAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 90 bp CAGAGGAGAGGAAAGTTGGGATTGAAGGTGCCTCTAATCATGGGTTaGGTCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGC +
Preference number: 1 (lower is better)
Translates to: QRRGKLGLKVPLIMG*VTGQARRASPLWGS
Trigger: GCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGACCCAACCCATGATTAGAGGCACCTTCAATCCCAACTTTCCTCTCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 90 bp GCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCCTaGAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCCCTGC +
Preference number: 1 (lower is better)
Translates to: ARRASPLWGSWSSQS*RETAVYAADLPNPC
Trigger: GCAGGGATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 90 bp AGGAAAGTTGGGATTGAAGGTGCCTCTAATCATGGGTTGGGTCACTaGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTC +
Preference number: 1 (lower is better)
Translates to: RKVGIEGASNHGLGH*PSSTCLPSLGQLVF
Trigger: GAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGACCCAACCCATGATTAGAGGCACCTTCAATCCCAACTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 90 bp CGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTaGTCATCTCCTCTTACTAAGCAGGTGAAGCAGAACTTCCAGAGG +
Preference number: 1 (lower is better)
Translates to: RRHPLGADGTCSPQE*SSPLTKQVKQNFQR
Trigger: CCTCTGGAAGTTCTGCTTCACCTGCTTAGTAAGAGGAGATGACCACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 90 bp TCAAGGTCACCTGAGAAGTCCTCCCATTGGCCAGGACTTGCCGTCTaGAAGGGGCCTCTATCCTGGTCATGTGGCTGGGCGTCTTTTGCT +
Preference number: 1 (lower is better)
Translates to: SRSPEKSSHWPGLAV*KGPLSWSCGWASFA
Trigger: AGCAAAAGACGCCCAGCCACATGACCAGGATAGAGGCCCCTTTCAGACGGCAAGTCCTGGCCAATGGGAGGACTTCTCAGGTGACCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 90 bp GCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCTATGGGTaGCCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGG +
Preference number: 1 (lower is better)
Translates to: AHNTDALVQTERVYG*PGKERKSSASGRNG
Trigger: CCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAGACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 90 bp CTGCTCCCAACCCACATCTTCTGCCTACTGCCTCCACGCCACCACTaGCTCCACCATCTTCAGTCTTATTTGGTAGCAACCCTTGGCCAG +
Preference number: 1 (lower is better)
Translates to: LLPTHIFCLLPPRHH*LHHLQSYLVATLGQ
Trigger: CTGGCCAAGGGTTGCTACCAAATAAGACTGAAGATGGTGGAGGCAGTGGTGGCGTGGAGGCAGTAGGCAGAAGATGTGGGTTGGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 90 bp CCTTACCCTATCGCCCAGCACACCCACACACAGGGAACTCACACATaGGACCTTTTGCAGAAGCTGACCAGAGTCCCCGGTAAGGAAGTC +
Preference number: 1 (lower is better)
Translates to: PYPIAQHTHTQGTHT*DLLQKLTRVPGKEV
Trigger: GACTTCCTTACCGGGGACTCTGGTCAGCTTCTGCAAAAGGTCTCATGTGTGAGTTCCCTGTGTGTGGGTGTGCTGGGCGATAGGGTAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 90 bp GTGCAGAGTCCCAGAGCTGTAATGTGGAGAACCACGGGGGTCCTCTaGCCCAGTGGCTTTGTTCTTGGTTCTGCCCTCTGGAAATTTCAG +
Preference number: 1 (lower is better)
Translates to: VQSPRAVMWRTTGVL*PSGFVLGSALWKFQ
Trigger: CTGAAATTTCCAGAGGGCAGAACCAAGAACAAAGCCACTGGGCCAGAGGACCCCCGTGGTTCTCCACATTACAGCTCTGGGACTCTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 90 bp TCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCTATaGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAA +
Preference number: 1 (lower is better)
Translates to: SRSQHRRTGTDGEGL*VTRKGKEKLSQWEE
Trigger: TTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAGACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 90 bp GCTCTTCACAGGAAAGGCTTCGTCACGCTCACAACACAGACGCACTaGTACAGACGGAGAGGGTCTATGGGTGACCCGGAAAGGAAAGGA +
Preference number: 1 (lower is better)
Translates to: ALHRKGFVTLTTQTH*YRRRGSMGDPERKG
Trigger: TCCTTTCCTTTCCGGGTCACCCATAGACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTCCTGTGAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 90 bp AACTTTCCCCATCTCAGAGATGAGGCAACACAAAGTCCGGCGAGATaGAGGTGCCTGAGCCAACTCAACTCTACCTTGGCACTGGCATCG +
Preference number: 1 (lower is better)
Translates to: NFPHLRDEATQSPAR*RCLSQLNSTLALAS
Trigger: CGATGCCAGTGCCAAGGTAGAGTTGAGTTGGCTCAGGCACCTGCATCTCGCCGGACTTTGTGTTGCCTCATCTCTGAGATGGGGAAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 90 bp AGCCCACTCCAGCAGACTCCCACCCCTACAGCGTTCACAACTCTCTaGCTGACTTTGCTTGCCAGCACCTGCAGTGCTAATTTGCTCAAA +
Preference number: 1 (lower is better)
Translates to: SPLQQTPTPTAFTTL*LTLLASTCSANLLK
Trigger: TTTGAGCAAATTAGCACTGCAGGTGCTGGCAAGCAAAGTCAGCCAGAGAGTTGTGAACGCTGTAGGGGTGGGAGTCTGCTGGAGTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 90 bp AGGATATCCTACCCTCTTGTCACAGGAGAGGCAAGCATTGCTAGGTaGGACCACTCATCCCTGATGGGAAGATATGCACCTGGGCTCAGG +
Preference number: 1 (lower is better)
Translates to: RISYPLVTGEASIAR*DHSSLMGRYAPGLR
Trigger: CCTGAGCCCAGGTGCATATCTTCCCATCAGGGATGAGTGGTCCCACCTAGCAATGCTTGCCTCTCCTGTGACAAGAGGGTAGGATATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 90 bp GTCTATCCCACACCAGCTGGAAGATGGCATGGAAGGCAACCCTGCTaGTGTGCACCAGCTCTTCCTATCTGCACTGAAATCACCTCTCAC +
Preference number: 1 (lower is better)
Translates to: VYPTPAGRWHGRQPC*CAPALPICTEITSH
Trigger: GTGAGAGGTGATTTCAGTGCAGATAGGAAGAGCTGGTGCACACCAGCAGGGTTGCCTTCCATGCCATCTTCCAGCTGGTGTGGGATAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 90 bp AAAATCTGCCCCCTTAGTCTATCCCACACCAGCTGGAAGATGGCATaGAAGGCAACCCTGCTGGTGTGCACCAGCTCTTCCTATCTGCAC +
Preference number: 1 (lower is better)
Translates to: KICPLSLSHTSWKMA*KATLLVCTSSSYLH
Trigger: GTGCAGATAGGAAGAGCTGGTGCACACCAGCAGGGTTGCCTTCCATGCCATCTTCCAGCTGGTGTGGGATAGACTAAGGGGGCAGATTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 90 bp CACTCCAGCAGACTCCCACCCCTACAGCGTTCACAACTCTCTGGCTaGCTTTGCTTGCCAGCACCTGCAGTGCTAATTTGCTCAAATGAG +
Preference number: 1 (lower is better)
Translates to: HSSRLPPLQRSQLSG*LCLPAPAVLICSNE
Trigger: CTCATTTGAGCAAATTAGCACTGCAGGTGCTGGCAAGCAAAGTCAGCCAGAGAGTTGTGAACGCTGTAGGGGTGGGAGTCTGCTGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 90 bp AGTGTGCTTAAGTGCGACAGGTCCAGCCCTGTTCAGCAACAAAGATaGCCTTGCACTCTGGGTTATCCTTCAGCAGCGAGGCACAGACAC +
Preference number: 1 (lower is better)
Translates to: SVLKCDRSSPVQQQR*PCTLGYPSAARHRH
Trigger: GTGTCTGTGCCTCGCTGCTGAAGGATAACCCAGAGTGCAAGGTCATCTTTGTTGCTGAACAGGGCTGGACCTGTCGCACTTAAGCACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 90 bp AAGCTGGAATTTCAGTGTGGTCATAGACAAGCCCTCTCCCCCAAATaGATGCTTGTGAACCTGTCTGTCCCTTCCTCGGCAGAGCCCCTT +
Preference number: 1 (lower is better)
Translates to: KLEFQCGHRQALSPK*MLVNLSVPSSAEPL
Trigger: AAGGGGCTCTGCCGAGGAAGGGACAGACAGGTTCACAAGCATCCATTTGGGGGAGAGGGCTTGTCTATGACCACACTGAAATTCCAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 90 bp TTAGTCTATCCCACACCAGCTGGAAGATGGCATGGAAGGCAACCCTaGTGGTGTGCACCAGCTCTTCCTATCTGCACTGAAATCACCTCT +
Preference number: 1 (lower is better)
Translates to: LVYPTPAGRWHGRQP*WCAPALPICTEITS
Trigger: AGAGGTGATTTCAGTGCAGATAGGAAGAGCTGGTGCACACCAGCAGGGTTGCCTTCCATGCCATCTTCCAGCTGGTGTGGGATAGACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 90 bp GAGAATGAAACGGTAGATAGAAGGCTCTGGACTCTGAGTGCAAACTaGCTGCTAGCTCAAGGTCACTTTCTGAGGGGCGAAAGCAGAGGC +
Preference number: 1 (lower is better)
Translates to: ENETVDRRLWTLSAN*LLAQGHFLRGESRG
Trigger: GCCTCTGCTTTCGCCCCTCAGAAAGTGACCTTGAGCTAGCAGCCAGTTTGCACTCAGAGTCCAGAGCCTTCTATCTACCGTTTCATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 90 bp ATCTCAGAGATGAGGCAACACAAAGTCCGGCGAGATGCAGGTGCCTaGGCCAACTCAACTCTACCTTGGCACTGGCATCGTCTTGATTTA +
Preference number: 1 (lower is better)
Translates to: ISEMRQHKVRRDAGA*ANSTLPWHWHRLDL
Trigger: TAAATCAAGACGATGCCAGTGCCAAGGTAGAGTTGAGTTGGCTCAGGCACCTGCATCTCGCCGGACTTTGTGTTGCCTCATCTCTGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 90 bp TGGCTGACTTTGCTTGCCAGCACCTGCAGTGCTAATTTGCTCAAATaGGCCCGAGACACTGGGGTGGATTTATTCCACCTCTGTTTGGGT +
Preference number: 1 (lower is better)
Translates to: WLTLLASTCSANLLK*ARDTGVDLFHLCLG
Trigger: ACCCAAACAGAGGTGGAATAAATCCACCCCAGTGTCTCGGGCTCATTTGAGCAAATTAGCACTGCAGGTGCTGGCAAGCAAAGTCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 90 bp TGGAAGGCAACCCTGCTGGTGTGCACCAGCTCTTCCTATCTGCACTaGAATCACCTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGG +
Preference number: 1 (lower is better)
Translates to: WKATLLVCTSSSYLH*NHLSLRNIVFPWKG
Trigger: CCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAGGTGATTTCAGTGCAGATAGGAAGAGCTGGTGCACACCAGCAGGGTTGCCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 90 bp ACACACACACACACGCACACACACACCACTCCAGGGATCTGTAGCTaGAGAATTGGCACCCTTATAGGCCTGTCCCTCATGACAATTTCT +
Preference number: 1 (lower is better)
Translates to: THTHTHTHTTPGICS*RIGTLIGLSLMTIS
Trigger: AGAAATTGTCATGAGGGACAGGCCTATAAGGGTGCCAATTCTGCAGCTACAGATCCCTGGAGTGGTGTGTGTGTGCGTGTGTGTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 90 bp CGTCTGAAAGGGGCCTCTATCCTGGTCATGTGGCTGGGCGTCTTTTaGTTCCCAGCAGGATCAGATCCCAAAGTGTGTTCGTATTTATCT +
Preference number: 1 (lower is better)
Translates to: RLKGASILVMWLGVF*FPAGSDPKVCSYLS
Trigger: AGATAAATACGAACACACTTTGGGATCTGATCCTGCTGGGAAGCAAAAGACGCCCAGCCACATGACCAGGATAGAGGCCCCTTTCAGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 90 bp TGGCATGGAAGGCAACCCTGCTGGTGTGCACCAGCTCTTCCTATCTaGACTGAAATCACCTCTCACTCAGAAACATCGTATTTCCCTGGA +
Preference number: 1 (lower is better)
Translates to: WHGRQPCWCAPALPI*TEITSHSETSYFPG
Trigger: TCCAGGGAAATACGATGTTTCTGAGTGAGAGGTGATTTCAGTGCAGATAGGAAGAGCTGGTGCACACCAGCAGGGTTGCCTTCCATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 90 bp CCACAGGAATTGCTGCCTCCAAGGGCAGAGGCATTGTTAGAATCCTaGAGTACACACCACTCCTTGTCTGACCAATCAGAAAGCACTATG +
Preference number: 1 (lower is better)
Translates to: PQELLPPRAEALLES*STHHSLSDQSESTM
Trigger: CATAGTGCTTTCTGATTGGTCAGACAAGGAGTGGTGTGTACTGCAGGATTCTAACAATGCCTCTGCCCTTGGAGGCAGCAATTCCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 90 bp TCTCAGTTTGTTTTCTCTTCCACTCCTTGTGTGTTGCTGGTGGGCTaGGAAGGAAGTCCGAACAGGAAGAGCAGGAGAAGAAGTGATTCT +
Preference number: 1 (lower is better)
Translates to: SQFVFSSTPCVLLVG*EGSPNRKSRRRSDS
Trigger: AGAATCACTTCTTCTCCTGCTCTTCCTGTTCGGACTTCCTTCCCAGCCCACCAGCAACACACAAGGAGTGGAAGAGAAAACAAACTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 90 bp GGGTGGGAAAAGGAATCTGAGAATGAAACGGTAGATAGAAGGCTCTaGACTCTGAGTGCAAACTGGCTGCTAGCTCAAGGTCACTTTCTG +
Preference number: 1 (lower is better)
Translates to: GWEKESENETVDRRL*TLSANWLLAQGHFL
Trigger: CAGAAAGTGACCTTGAGCTAGCAGCCAGTTTGCACTCAGAGTCCAGAGCCTTCTATCTACCGTTTCATTCTCAGATTCCTTTTCCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 90 bp AAGGCTGCTGAGTGCCTGGCAAAGCTCCCAAAGCATATTTGTTTATaGAACAAGGGGATTCTCTGCTACACAGTTGACCATGGCTACACC +
Preference number: 1 (lower is better)
Translates to: KAAECLAKLPKHICL*NKGILCYTVDHGYT
Trigger: GGTGTAGCCATGGTCAACTGTGTAGCAGAGAATCCCCTTGTTTCATAAACAAATATGCTTTGGGAGCTTTGCCAGGCACTCAGCAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 90 bp AGCAACACCTGGTCCTTGGGAATGAAGTGTAGGAGTTGCATTTGCTaGGGTTGGTGTTTGCCAAAGAGATGCCAGCTTCTTCGAACTACT +
Preference number: 1 (lower is better)
Translates to: SNTWSLGMKCRSCIC*GWCLPKRCQLLRTT
Trigger: AGTAGTTCGAAGAAGCTGGCATCTCTTTGGCAAACACCAACCTCAGCAAATGCAACTCCTACACTTCATTCCCAAGGACCAGGTGTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 90 bp TCACACCATGGGTGGAAATGGGGAAGGAGTATGAGAATGAGTTCATaGAAGCTCTTCACAGGAAAGGCTTCGTCACGCTCACAACACAGA +
Preference number: 1 (lower is better)
Translates to: SHHGWKWGRSMRMSS*KLFTGKASSRSQHR
Trigger: TCTGTGTTGTGAGCGTGACGAAGCCTTTCCTGTGAAGAGCTTTCATGAACTCATTCTCATACTCCTTCCCCATTTCCACCCATGGTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 90 bp CCTACTTCCTATTACTTCAGGGTTACTGCTTTGAGGATCCTTCTCTaGTGCCTTGCTGAGGATTTTCTGGTGCTTCTGCCATCTGTCCTT +
Preference number: 1 (lower is better)
Translates to: PTSYYFRVTALRILL*CLAEDFLVLLPSVL
Trigger: AAGGACAGATGGCAGAAGCACCAGAAAATCCTCAGCAAGGCAGCAGAGAAGGATCCTCAAAGCAGTAACCCTGAAGTAATAGGAAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 90 bp GACCTCCTTATAAAACCTACAGCCACAATGAACAAGGAAGGGGGCTaGTTGGAGTCTAGGAGCCTCTCTACAGATGAATCACTTGTCTAT +
Preference number: 1 (lower is better)
Translates to: DLLIKPTATMNKEGG*LESRSLSTDESLVY
Trigger: ATAGACAAGTGATTCATCTGTAGAGAGGCTCCTAGACTCCAAGCAGCCCCCTTCCTTGTTCATTGTGGCTGTAGGTTTTATAAGGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 90 bp TCCCTCATGACAATTTCTAGGTCTCTGGGCCTCTATCTGGGGCCATaGAACCACTACAGTGATAAGAGAGACAACAGTCATAATGCAGTA +
Preference number: 1 (lower is better)
Translates to: SLMTISRSLGLYLGP*NHYSDKRDNSHNAV
Trigger: TACTGCATTATGACTGTTGTCTCTCTTATCACTGTAGTGGTTTCATGGCCCCAGATAGAGGCCCAGAGACCTAGAAATTGTCATGAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 90 bp AAGGGGAGATGTCCAGTGACAAAGGACAGCTTCTATAATGGGGAGTaGAGGTCTTGTTGGTTTATGTTCTTGTACAACAGCAACCAGAGC +
Preference number: 1 (lower is better)
Translates to: KGRCPVTKDSFYNGE*RSCWFMFLYNSNQS
Trigger: GCTCTGGTTGCTGTTGTACAAGAACATAAACCAACAAGACCTTCACTCCCCATTATAGAAGCTGTCCTTTGTCACTGGACATCTCCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 90 bp AGTAGGGAAGGAAATAAAAGTTGCAATGGGCCCCAGGCTCAAGGTTaGCTTGCATGGAGCTCAAAGCACATACATGTTCATATGCCAGTA +
Preference number: 1 (lower is better)
Translates to: SREGNKSCNGPQAQG*LAWSSKHIHVHMPV
Trigger: TACTGGCATATGAACATGTATGTGCTTTGAGCTCCATGCAAGTCAACCTTGAGCCTGGGGCCCATTGCAACTTTTATTTCCTTCCCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 90 bp GCTCCAAATATTGGTGAGATGATATTAGCAGGTGACTGGCCCAGGTaGCGAAATGTTGTAGAGATCTTTGTTCTTGACAGAGAGAAGGCC +
Preference number: 1 (lower is better)
Translates to: APNIGEMILAGDWPR*RNVVEIFVLDREKA
Trigger: GGCCTTCTCTCTGTCAAGAACAAAGATCTCTACAACATTTCGTCACCTGGGCCAGTCACCTGCTAATATCATCTCACCAATATTTGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 90 bp GTTGGTGTTTGCCAAAGAGATGCCAGCTTCTTCGAACTACTGCTGTaGAACTCTTCATGTTCAGACCCAGTTTTCTGTTTTTCACACCTG +
Preference number: 1 (lower is better)
Translates to: VGVCQRDASFFELLL*NSSCSDPVFCFSHL
Trigger: CAGGTGTGAAAAACAGAAAACTGGGTCTGAACATGAAGAGTTGCACAGCAGTAGTTCGAAGAAGCTGGCATCTCTTTGGCAAACACCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 90 bp CTGAGGTTGGTGTTTGCCAAAGAGATGCCAGCTTCTTCGAACTACTaGTGTGCAACTCTTCATGTTCAGACCCAGTTTTCTGTTTTTCAC +
Preference number: 1 (lower is better)
Translates to: LRLVFAKEMPASSNY*CATLHVQTQFSVFH
Trigger: GTGAAAAACAGAAAACTGGGTCTGAACATGAAGAGTTGCACAGCAGTAGTTCGAAGAAGCTGGCATCTCTTTGGCAAACACCAACCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 90 bp CTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTGTGGATaGATATTGAGATATAGGGCCCAGTCTCAGAGTCCTAGGATATCC +
Preference number: 1 (lower is better)
Translates to: LHTVHSFPASYHECG*ILRYRAQSQSPRIS
Trigger: GGATATCCTAGGACTCTGAGACTGGGCCCTATATCTCAATATTCATCCACACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 90 bp ATCTTGCCTCTCAGCATGTTCTCTTCCCTTCCCACCTATGAAACATaGTCCAAAAGTTTGGCAGCAAAGAGAAAACGTCCTTCTCAGTTT +
Preference number: 1 (lower is better)
Translates to: ILPLSMFSSLPTYET*SKSLAAKRKRPSQF
Trigger: AAACTGAGAAGGACGTTTTCTCTTTGCTGCCAAACTTTTGGACCATGTTTCATAGGTGGGAAGGGAAGAGAACATGCTGAGAGGCAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 90 bp CCCAGCTCCTTGAGACTTGGTCTCATCCTAAACTTGAAAGATCATTaGAACCTTTCAGAATCTGATTTGCTTCCACCCATTCCTTTTGGG +
Preference number: 1 (lower is better)
Translates to: PSSLRLGLILNLKDH*NLSESDLLPPIPFG
Trigger: CCCAAAAGGAATGGGTGGAAGCAAATCAGATTCTGAAAGGTTTCAATGATCTTTCAAGTTTAGGATGAGACCAAGTCTCAAGGAGCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 90 bp AATGAAACAGATTACACAGCAGTGGAAGAAAGGCTGCTGAGTGCCTaGCAAAGCTCCCAAAGCATATTTGTTTATGAAACAAGGGGATTC +
Preference number: 1 (lower is better)
Translates to: NETDYTAVEERLLSA*QSSQSIFVYETRGF
Trigger: GAATCCCCTTGTTTCATAAACAAATATGCTTTGGGAGCTTTGCCAGGCACTCAGCAGCCTTTCTTCCACTGCTGTGTAATCTGTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 90 bp TATATGAATTCATATGTTTTTGACGAAGCTACTGGCTTCAGCAACTaGCAAGAGAAAGAAGATCCCAGCTCCTTGAGACTTGGTCTCATC +
Preference number: 1 (lower is better)
Translates to: YMNSYVFDEATGFSN*QEKEDPSSLRLGLI
Trigger: GATGAGACCAAGTCTCAAGGAGCTGGGATCTTCTTTCTCTTGTCAGTTGCTGAAGCCAGTAGCTTCGTCAAAAACATATGAATTCATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 90 bp CTTCAGCAACTGACAAGAGAAAGAAGATCCCAGCTCCTTGAGACTTaGTCTCATCCTAAACTTGAAAGATCATTGAAACCTTTCAGAATC +
Preference number: 1 (lower is better)
Translates to: LQQLTRERRSQLLET*SHPKLERSLKPFRI
Trigger: GATTCTGAAAGGTTTCAATGATCTTTCAAGTTTAGGATGAGACCAAGTCTCAAGGAGCTGGGATCTTCTTTCTCTTGTCAGTTGCTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 90 bp CTAGAATATTTTAAATTGCATATGTGGCTTGGATCATGGTTCCATTaGATGACGCTGGTCTATACTACCTTCCTGAAGCTGGTTCCATCA +
Preference number: 1 (lower is better)
Translates to: LEYFKLHMWLGSWFH*MTLVYTTFLKLVPS
Trigger: TGATGGAACCAGCTTCAGGAAGGTAGTATAGACCAGCGTCATCCAATGGAACCATGATCCAAGCCACATATGCAATTTAAAATATTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 90 bp AACAGAAGAAGAAACCGTAACTCCCAAAATAAGGAGAAAAAGATATaGGACCTCTCTCTAGGTAGAATACCTCACTTTCCTGAATCTCAA +
Preference number: 1 (lower is better)
Translates to: NRRRNRNSQNKEKKI*DLSLGRIPHFPESQ
Trigger: TTGAGATTCAGGAAAGTGAGGTATTCTACCTAGAGAGAGGTCCCATATCTTTTTCTCCTTATTTTGGGAGTTACGGTTTCTTCTTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCCCCATCCTCGCCAGTaGTGGGGATCAAGACGCGGT +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSPHPRQ*WGSRRG
Trigger: ACCGCGTCTTGATCCCCATCACTGGCGAGGATGGGG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTCCGGTAAGGAAGTCTTaGGTAGGGCACCCACACCTG +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSPVRKS*VGHPHL
Trigger: CAGGTGTGGGTGCCCTACTCAAGACTTCCTTACCGG...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTCCTGCTCTGGGCTGGTaGGTTGAGCCCAGGTTGTTT +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSPALGW*VEPRLF
Trigger: AAACAACCTGGGCTCAACTCACCAGCCCAGAGCAGG...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTAAGGGGCCTCTATCCTaGTCATGTGGCTGGGCGTCT +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSKGPLS*SCGWAS
Trigger: AGACGCCCAGCCACATGACCAGGATAGAGGCCCCTT...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTAGCTGGAAGATGGCATaGAAGGCAACCCTGCTGGTG +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSSWKMA*KATLLV
Trigger: CACCAGCAGGGTTGCCTTCCATGCCATCTTCCAGCT...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTGGAGTTAGCAGAGTCTaGCCTACAGAGCCTCACAAG +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSGVSRV*PTEPHK
Trigger: CTTGTGAGGCTCTGTAGGTCAGACTCTGCTAACTCC...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCTCAAGGTCACTTTCTaGGGGGCGAAAGCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSLKVTF*GAKAEA
Trigger: GGCCTCTGCTTTCGCCCCTCAGAAAGTGACCTTGAG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCAAAGTCCGGCGAGATaGAGGTGCCTGAGCCAACTC +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSQSPAR*RCLSQL
Trigger: GAGTTGGCTCAGGCACCTGCATCTCGCCGGACTTTG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCCTGATGGGAAGATATaGACCTGGGCTCAGGGCGCT +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSPDGKI*TWAQGA
Trigger: AGCGCCCTGAGCCCAGGTGCATATCTTCCCATCAGG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTGCTCTGGACTCTGAGTaGAAACTGGCTGCTAGCTCA +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSALDSE*KLAASS
Trigger: TGAGCTAGCAGCCAGTTTGCACTCAGAGTCCAGAGC...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCCTCCACGCCACCACTaGCTCCACCATCTTCAGTCT +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSPPRHH*LHHLQS
Trigger: AGACTGAAGATGGTGGAGGCAGTGGTGGCGTGGAGG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTAGACGCGGTCGCAAGTaGTGGTGTTTGCTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSRRGRK*WCLLCL
Trigger: AAGACAGAGCAAACACCACCACTTGCGACCGCGTCT...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTCCTCCCCAGGGCTGCTaGGCACCAGCAGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGPPQGC*APAGSL
Trigger: CAGTGAGCCTGCTGGTGCCCAGCAGCCCTGGGGAGG...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTTCAAAGCCCCTGCTCTaGGCTGGTGAGTTGAGCCCA +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSSKPLL*AGELSP
Trigger: TGGGCTCAACTCACCAGCCCAGAGCAGGGGCTTTGA...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTGCAAGCATTGCTAGGTaGGACCACTCATCCCTGATG +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSASIAR*DHSSLM
Trigger: CATCAGGGATGAGTGGTCCCACCTAGCAATGCTTGC...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTGAGGTCATGACCATTTaGATTGGGCCCGCGGTAGAT +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSEVMTI*IGPAVD
Trigger: ATCTACCGCGGGCCCAATCCAAATGGTCATGACCTC...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCCCCCATCCTCGCCAGTaGTGGGGATCAAGACGCGGT +
Preference number: 2 (lower is better)
Translates to: ERLRHAHNTDALVQTERVPHPRQ*WGSRRG
Trigger: ACCGCGTCTTGATCCCCATCACTGGCGAGGATGGGG...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTTGCTCTCTCTGCATGTaGCCCACTTCCTTTCGTTTG +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSCSLCM*PTSFRL
Trigger: CAAACGAAAGGAAGTGGGTCACATGCAGAGAGAGCA...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTGGCTTGGAGGAGGATTaGAGCTGGAACAGGCACAGA +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSGLEED*SWNRHR
Trigger: TCTGTGCCTGTTCCAGCTTCAATCCTCCTCCAAGCC...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTGGGACCACTCATCCCTaGTGGGAAGATATGCACCTG +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSGTTHP*WEDMHL
Trigger: CAGGTGCATATCTTCCCATCAGGGATGAGTGGTCCC...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGGGGGGCTCAGGGCCCTaGACTCTTGCTGCCAGGAAC +
Preference number: 2 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGGGSGP*TLAARN
Trigger: GTTCCTGGCAGCAAGAGTGCAGGGCCCTGAGCCCCC...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
60% GC, longest homopolymer 10 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGGAGTGCAGGTGCGGCTaGGGACAGGGTGGCCTCTTG +
Preference number: 2 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGECRCG*GQGGLL
Trigger: CAAGAGGCCACCCTGTCCCCAGCCGCACCTGCACTC...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTCAATTTCTAGGTCTCTaGGCCTCTATCTGGGGCCAT +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSQFLGL*ASIWGH
Trigger: ATGGCCCCAGATAGAGGCCCAGAGACCTAGAAATTG...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTATGAGCCCGAGACACTaGGGTGGATTTATTCCACCT +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSMSPRH*GGFIPP
Trigger: AGGTGGAATAAATCCACCCCAGTGTCTCGGGCTCAT...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCTCAGGGATTCTCACCTaGCCTCCCCAGGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: ERLRHAHNTDALVQTERVSGILT*PPQGCW
Trigger: CCAGCAGCCCTGGGGAGGCCAGGTGAGAATCCCTGA...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 90 bp GCAGAGGAGAGGAAAGTTGGGATTGAAGGTGCCTCTAATCATGGGTaGGGTCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: AEERKVGIEGASNHG*GHWPSSTCLPSLGQ
Trigger: CTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGACCCAACCCATGATTAGAGGCACCTTCAATCCCAACTTTCCTCTCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTTGTTACCCTGTGATATaGCTGGTTAGGGGTGGCGTC +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSCYPVI*LVRGGV
Trigger: GACGCCACCCCTAACCAGTCATATCACAGGGTAACA...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTTCACAACTCTCTGGCTaGCTTTGCTTGCCAGCACCT +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSSQLSG*LCLPAP
Trigger: AGGTGCTGGCAAGCAAAGTCAGCCAGAGAGTTGTGA...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTAACCACACCAAAGGATaGCCAGAGTGTATCTCTTCC +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSNHTKG*PECISS
Trigger: GGAAGAGATACACTCTGGTCATCCTTTGGTGTGGTT...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTCCTGCAGTGCTAATTTaGTCAAATGAGCCCGAGACA +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSPAVLI*SNEPET
Trigger: TGTCTCGGGCTCATTTGAGCAAATTAGCACTGCAGG...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTGCACCCACACCTGTGTaGAGGTGTGTACTGACACAA +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSAPTPV*RCVLTQ
Trigger: TTGTGTCAGTACACACCTGCACACAGGTGTGGGTGC...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGGGGGCTCAGGGCCCTaGACTCTTGCTGCCAGGAAC +
Preference number: 2 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAGGSGP*TLAARN
Trigger: GTTCCTGGCAGCAAGAGTGCAGGGCCCTGAGCCCCC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTCCTCCCCAGGGCTGCTaGGCACCAGCAGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGPPQGC*APAGSL
Trigger: CAGTGAGCCTGCTGGTGCCCAGCAGCCCTGGGGAGG...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTACAACACAGACGCACTaGTACAGACGGAGAGGGTCT +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSTTQTH*YRRRGS
Trigger: AGACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGT...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTTTTGGTAGCAACCCTTaGCCAGACTCCCTGCTTCTG +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSFGSNP*PDSLLL
Trigger: CAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAA...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGGCGTCCTCTCCCGTTaGCCCAGTGGGTGGCACTTC +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGGVLSR*PSGWHF
Trigger: GAAGTGCCACCCACTGGGTCAACGGGAGAGGACGCC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTTGGGATTCATGGCCTTaGATATCAAGAGGGAAAGGA +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSWDSWP*ISRGKG
Trigger: TCCTTTCCCTCTTGATATTCAAGGCCATGAATCCCA...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCCCTGCTCTGGGCTGGTaGGTTGAGCCCAGGTTGTTT +
Preference number: 2 (lower is better)
Translates to: ERLRHAHNTDALVQTERVPALGW*VEPRLF
Trigger: AAACAACCTGGGCTCAACTCACCAGCCCAGAGCAGG...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGCCAGGACTTGCCGTCTaGAAGGGGCCTCTATCCTGG +
Preference number: 2 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGPGLAV*KGPLSW
Trigger: CCAGGATAGAGGCCCCTTTCAGACGGCAAGTCCTGG...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGCCAGGACTTGCCGTCTaGAAGGGGCCTCTATCCTGG +
Preference number: 2 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGPGLAV*KGPLSW
Trigger: CCAGGATAGAGGCCCCTTTCAGACGGCAAGTCCTGG...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCCTCACAAGGACACTTaGTCCGCTGCAAAGCAGAAA +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSPHKDT*SAAKQK
Trigger: TTTCTGCTTTGCAGCGGATCAAGTGTCCTTGTGAGG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCGCCCTGCACTCTTGCTaGCAGGAACACAGGGTCAAC +
Preference number: 2 (lower is better)
Translates to: ERLRHAHNTDALVQTERVALHSC*QEHRVN
Trigger: GTTGACCCTGTGTTCCTGGCAGCAAGAGTGCAGGGC...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGAGGGCCCTGCACTCTTaGTGCCAGGAACACAGGGTC +
Preference number: 2 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGRALHS*CQEHRV
Trigger: GACCCTGTGTTCCTGGCAGCAAGAGTGCAGGGCCCT...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTTGGCCAAGCTCGACGTaGCTCCCCTCTCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGWPSST*LPSLGQ
Trigger: CTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCA...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTTATTCCACCTCTGTTTaGGTGCTAGCCACTAAGACT +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSYSTSV*VLATKT
Trigger: AGTCTTAGTGGCTAGCACCCAAACAGAGGTGGAATA...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCTCAGGGATTCTCACCTaGCCTCCCCAGGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQASGILT*PPQGCW
Trigger: CCAGCAGCCCTGGGGAGGCCAGGTGAGAATCCCTGA...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCTCTATCTGGGGCCATaGAACCACTACAGTGATAAG +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSLYLGP*NHYSDK
Trigger: CTTATCACTGTAGTGGTTTCATGGCCCCAGATAGAG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTAATATCATACAAACTTaGGCCCATGGGAAATGGAGG +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSNIIQT*AHGKWR
Trigger: CCTCCATTTCCCATGGGCTCAAGTTTGTATGATATT...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGCCGGTAAGGAAGTCTTaGGTAGGGCACCCACACCTG +
Preference number: 2 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGPVRKS*VGHPHL
Trigger: CAGGTGTGGGTGCCCTACTCAAGACTTCCTTACCGG...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCACCTTTTGCAGAAGCTaGCCAGAGTCCCCGGTAAGG +
Preference number: 2 (lower is better)
Translates to: ERLRHAHNTDALVQTERVTFCRS*PESPVR
Trigger: CCTTACCGGGGACTCTGGTCAGCTTCTGCAAAAGGT...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGGGGATCAAGGTCACCTaGGAAGTCCTCCCATTGGCC +
Preference number: 2 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGGIKVT*EVLPLA
Trigger: GGCCAATGGGAGGACTTCTCAGGTGACCTTGATCCC...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
57% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTGGTTGGGTTCCACTTTaGTTTGGAGTTAGCAGAGTC +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSGWVPL*FGVSRV
Trigger: GACTCTGCTAACTCCAAATCAAAGTGGAACCCAACC...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTTCCGGCATCTTATCATaGGTGTGGATGAATATTGAG +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSSGILS*VWMNIE
Trigger: CTCAATATTCATCCACACTCATGATAAGATGCCGGA...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTGCAAGTGGTGGTGTTTaGTCTGTCTTCAAGAGACCA +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSASGGV*SVFKRP
Trigger: TGGTCTCTTGAAGACAGAGCAAACACCACCACTTGC...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCCAGGGATCTGTAGCTaGAGAATTGGCACCCTTATA +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSPGICS*RIGTLI
Trigger: TATAAGGGTGCCAATTCTGCAGCTACAGATCCCTGG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTTTCGAACTACTGCTGTaGAACTCTTCATGTTCAGAC +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSFELLL*NSSCSD
Trigger: GTCTGAACATGAAGAGTTGCACAGCAGTAGTTCGAA...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGACCACGGGGGTCCTCTaGCCCAGTGGCTTTGTTCTT +
Preference number: 2 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGTTGVL*PSGFVL
Trigger: AAGAACAAAGCCACTGGGCCAGAGGACCCCCGTGGT...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTGAGAGAGAAGGTAAGTaGTTAGTAGGTGAGAAAAGG +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSEREGK*LVGEKR
Trigger: CCTTTTCTCACCTACTAACCACTTACCTTCTCTCTC...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTTCCCCATCTCAGAGATaGGGCAACACAAAGTCCGGC +
Preference number: 2 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGSPSQR*GNTKSG
Trigger: GCCGGACTTTGTGTTGCCTCATCTCTGAGATGGGGA...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGTCCCCATCTCAGAGATaGGGCAACACAAAGTCCGGC +
Preference number: 2 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGSPSQR*GNTKSG
Trigger: GCCGGACTTTGTGTTGCCTCATCTCTGAGATGGGGA...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGCCCCAGGCTCAAGGTTaGCTTGCATGGAGCTCAAAG +
Preference number: 2 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGPQAQG*LAWSSK
Trigger: CTTTGAGCTCCATGCAAGTCAACCTTGAGCCTGGGG...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTCCCCAGGCTCAAGGTTaGCTTGCATGGAGCTCAAAG +
Preference number: 2 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGPQAQG*LAWSSK
Trigger: CTTTGAGCTCCATGCAAGTCAACCTTGAGCCTGGGG...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTCTTGTCTATGTTAATTaGCCAAAGTTGATGCAGGAG +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSLVYVN*PKLMQE
Trigger: CTCCTGCATCAACTTTGGTCAATTAACATAGACAAG...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCAACCTACAGCCACAATaGACAAGGAAGGGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: ERLRHAHNTDALVQTERVNLQPQ*TRKGAA
Trigger: AGCAGCCCCCTTCCTTGTTCATTGTGGCTGTAGGTT...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTGGGACCACTCATCCCTaGTGGGAAGATATGCACCTG +
Preference number: 2 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGGTTHP*WEDMHL
Trigger: CAGGTGCATATCTTCCCATCAGGGATGAGTGGTCCC...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTGTAGATGCCTCAGAGTaGCTGGATTATGAAAAATCT +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSVDASE*LDYEKS
Trigger: AGATTTTTCATAATCCAGTCACTCTGAGGCATCTAC...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTGTTCAGCAACAAAGATaGCCTTGCACTCTGGGTTAT +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSVQQQR*PCTLGY
Trigger: ATAACCCAGAGTGCAAGGTCATCTTTGTTGCTGAAC...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCAGACGCGGTCGCAAGTaGTGGTGTTTGCTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: ERLRHAHNTDALVQTERVRRGRK*WCLLCL
Trigger: AAGACAGAGCAAACACCACCACTTGCGACCGCGTCT...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTCTCCCGTTGACCCAGTaGGTGGCACTTCCTTCTCTA +
Preference number: 2 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGLPLTQ*VALPSL
Trigger: TAGAGAAGGAAGTGCCACCCACTGGGTCAACGGGAG...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTCGGCTGGGGACAGGGTaGCCTCTTGTTTCACTGGGT +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGRLGTG*PLVSLG
Trigger: ACCCAGTGAAACAAGAGGCCACCCTGTCCCCAGCCG...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCGCGTTCACAACTCTCTaGCTGACTTTGCTTGCCAGC +
Preference number: 2 (lower is better)
Translates to: ERLRHAHNTDALVQTERVAFTTL*LTLLAS
Trigger: GCTGGCAAGCAAAGTCAGCCAGAGAGTTGTGAACGC...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTCATGACCATTTGGATTaGGCCCGCGGTAGATGCCTC +
Preference number: 2 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGHDHLD*ARGRCL
Trigger: GAGGCATCTACCGCGGGCCCAATCCAAATGGTCATG...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCACCAGTGCGGTTCTGTaGTGTACACTGCTCACATGG +
Preference number: 2 (lower is better)
Translates to: ERLRHAHNTDALVQTERVTSAVL*CTLLTW
Trigger: CCATGTGAGCAGTGTACACCACAGAACCGCACTGGT...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 90 bp ATGGCTTCCCTTCCCTTGAAGGAAGTCTCACCCTCACAAGGACACTaGATCCGCTGCAAAGCAGAAAGTGTGCGGACCCTTTGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: MASLPLKEVSPSQGH*IRCKAESVRTLWEG
Trigger: CCCTTCCCAAAGGGTCCGCACACTTTCTGCTTTGCAGCGGATCAAGTGTCCTTGTGAGGGTGAGACTTCCTTCAAGGGAAGGGAAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 90 bp GCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATaGAAGGTGCCTCTAATCATGGGTTGGGTCACTGGCCAAGCTCGA +
Preference number: 2 (lower is better)
Translates to: AGSITVTQQRRGKLG*KVPLIMGWVTGQAR
Trigger: TCGAGCTTGGCCAGTGACCCAACCCATGATTAGAGGCACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTTGTTACCCTGTGATATaGCTGGTTAGGGGTGGCGTC +
Preference number: 2 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGCYPVI*LVRGGV
Trigger: GACGCCACCCCTAACCAGTCATATCACAGGGTAACA...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGGCTAATTTGCTCAAATaGGCCCGAGACACTGGGGTG +
Preference number: 2 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGANLLK*ARDTGV
Trigger: CACCCCAGTGTCTCGGGCTCATTTGAGCAAATTAGC...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGTCTCTGCTACACAGTTaGCCATGGCTACACCAGCTC +
Preference number: 2 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGSLLHS*PWLHQL
Trigger: GAGCTGGTGTAGCCATGGTCAACTGTGTAGCAGAGA...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTTGTGCAGGTGTGTACTaGCACAAACGTACACAAAAT +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSCAGVY*HKRTQN
Trigger: ATTTTGTGTACGTTTGTGTCAGTACACACCTGCACA...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCCAGGGAACTCACACATaGGACCTTTTGCAGAAGCTG +
Preference number: 2 (lower is better)
Translates to: ERLRHAHNTDALVQTERVQGTHT*DLLQKL
Trigger: CAGCTTCTGCAAAAGGTCTCATGTGTGAGTTCCCTG...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGAACCTACAGCCACAATaGACAAGGAAGGGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGNLQPQ*TRKGAA
Trigger: AGCAGCCCCCTTCCTTGTTCATTGTGGCTGTAGGTT...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCCACAGACACTTGATGTaGGAATTCCATTCCAGCGGG +
Preference number: 2 (lower is better)
Translates to: ERLRHAHNTDALVQTERVHRHLM*EFHSSG
Trigger: CCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTG...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTCCCTTCAAACATTGCTaGTTTACTTTTATTTTGGGG +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSPFKHC*FTFILG
Trigger: CCCCAAAATAAAAGTAAATCAGCAATGTTTGAAGGG...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGGCACCCACACCTGTGTaGAGGTGTGTACTGACACAA +
Preference number: 2 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGAPTPV*RCVLTQ
Trigger: TTGTGTCAGTACACACCTGCACACAGGTGTGGGTGC...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTTCACATGGCCCCAGCTaGCAACCCAGAGACAAGCAC +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGSHGPS*QPRDKH
Trigger: GTGCTTGTCTCTGGGTTGGCAGCTGGGGCCATGTGA...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTGGTTTAGCTCATATATaGTATTTGCCCCATATGGTT +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSGLAHI*YLPHMV
Trigger: AACCATATGGGGCAAATAGCATATATGAGCTAAACC...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCTTTGTCATGACCCTTaGCATGACCCTTCAAACATT +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSLCHDP*HDPSNI
Trigger: AATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGCTCTGGGCCTCTATCTaGGGCCATGAAACCACTACA +
Preference number: 2 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGLWASI*GHETTT
Trigger: TGTAGTGGTTTCATGGCCCCAGATAGAGGCCCAGAG...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTACCACGGGGGTCCTCTaGCCCAGTGGCTTTGTTCTT +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGTTGVL*PSGFVL
Trigger: AAGAACAAAGCCACTGGGCCAGAGGACCCCCGTGGT...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTAGGCTGCTGAGTGCCTaGCAAAGCTCCCAAAGCATA +
Preference number: 2 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGRLLSA*QSSQSI
Trigger: TATGCTTTGGGAGCTTTGCCAGGCACTCAGCAGCCT...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTAGAGTGGTAGGAAGATaGGTTGGAAGACGTGTAAAT +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSRVVGR*VGRRVN
Trigger: ATTTACACGTCTTCCAACCCATCTTCCTACCACTCT...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTGAGAGAGAAGGTAAGTaGTTAGTAGGTGAGAAAAGG +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSEREGK*LVGEKR
Trigger: CCTTTTCTCACCTACTAACCACTTACCTTCTCTCTC...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCATTCTAAATGCCTCTaGGTGATGTACCTGAGTTCA +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSHSKCL*VMYLSS
Trigger: TGAACTCAGGTACATCACCCAGAGGCATTTAGAATG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCAGTGTGCGGACCCTTTaGGAAGGGCGTTCTTTTCTT +
Preference number: 2 (lower is better)
Translates to: ERLRHAHNTDALVQTERVSVRTL*EGRSFL
Trigger: AAGAAAAGAACGCCCTTCCCAAAGGGTCCGCACACT...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 90 bp CCTGAAGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTaGGGATTGAAGGTGCCTCTAATCATGGGTTGGGTCACTGGCCAA +
Preference number: 2 (lower is better)
Translates to: PEAGSITVTQQRRGK*GLKVPLIMGWVTGQ
Trigger: TTGGCCAGTGACCCAACCCATGATTAGAGGCACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTCGAGATGCAGGTGCCTaGGCCAACTCAACTCTACCT +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGRDAGA*ANSTLP
Trigger: AGGTAGAGTTGAGTTGGCTCAGGCACCTGCATCTCG...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGCTAATTTGCTCAAATaGGCCCGAGACACTGGGGTG +
Preference number: 2 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAANLLK*ARDTGV
Trigger: CACCCCAGTGTCTCGGGCTCATTTGAGCAAATTAGC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGCCAAATGGATGCTTGTaGACCTGTCTGTCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGPNGCL*TCLSLP
Trigger: AGGAAGGGACAGACAGGTTCACAAGCATCCATTTGG...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTGAATTCATATGTTTTTaGCGAAGCTACTGGCTTCAG +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSEFICF*RSYWLQ
Trigger: CTGAAGCCAGTAGCTTCGTCAAAAACATATGAATTC...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCAGGAGTTGCATTTGCTaGGGTTGGTGTTTGCCAAAG +
Preference number: 2 (lower is better)
Translates to: ERLRHAHNTDALVQTERVRSCIC*GWCLPK
Trigger: CTTTGGCAAACACCAACCTCAGCAAATGCAACTCCT...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCAACAAGGGGATTCTCTaGTACACAGTTGACCATGGC +
Preference number: 2 (lower is better)
Translates to: ERLRHAHNTDALVQTERVNKGIL*YTVDHG
Trigger: GCCATGGTCAACTGTGTAGCAGAGAATCCCCTTGTT...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCAACAACTTTTCCCGTTaGACACCTTACCCTATCGCC +
Preference number: 2 (lower is better)
Translates to: ERLRHAHNTDALVQTERVNNFSR*TPYPIA
Trigger: GGCGATAGGGTAAGGTGTGCAACGGGAAAAGTTGTT...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCTGGCTGGGCGTCTTTTaGTTCCCAGCAGGATCAGAT +
Preference number: 2 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAWLGVF*FPAGSD
Trigger: ATCTGATCCTGCTGGGAAGCAAAAGACGCCCAGCCA...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTTTCTGTGGTGTACACTaGTCACATGGCCCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGFCGVH*SHGPSC
Trigger: GCAGCTGGGGCCATGTGAGCAGTGTACACCACAGAA...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGACTTTTAGGCCTCTTTaGTATCTCTGGGGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGTFRPL*YLWGLR
Trigger: CCTGAGCCCCCAGAGATAGCAAAGAGGCCTAAAAGT...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTCACAAATCATTTCAGTaGAGAGCTGTAGTGAAATTT +
Preference number: 2 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSHKSFQ*RAVVKF
Trigger: AAATTTCACTACAGCTCTGCACTGAAATGATTTGTG...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCAATACACAAGGGGACTaGGCACCCCCAGAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLINTQGD*APPEPW
Trigger: CCAGGGCTCTGGGGGTGCGCAGTCCCCTTGTGTATT...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCCGCGGTCGCAAGTGGTaGTGTTTGCTCTGTCTTCAA +
Preference number: 2 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQARGRKW*CLLCLQ
Trigger: TTGAAGACAGAGCAAACACCACCACTTGCGACCGCG...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACGTGTTGCTGGTGGGCTaGGAAGGAAGTCCGAACAGG +
Preference number: 2 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHVLLVG*EGSPNR
Trigger: CCTGTTCGGACTTCCTTCCCAGCCCACCAGCAACAC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGACGGAGAGGGTCTATaGGTGACCCGGAAAGGAAAG +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGDGEGL*VTRKGK
Trigger: CTTTCCTTTCCGGGTCACCCATAGACCCTCTCCGTC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 90 bp CCGTCTGAAAGGGGCCTCTATCCTGGTCATGTGGCTGGGCGTCTTTaGCTTCCCAGCAGGATCAGATCCCAAAGTGTGTTCGTATTTATC +
Preference number: 2 (lower is better)
Translates to: PSERGLYPGHVAGRL*LPSRIRSQSVFVFI
Trigger: GATAAATACGAACACACTTTGGGATCTGATCCTGCTGGGAAGCAAAAGACGCCCAGCCACATGACCAGGATAGAGGCCCCTTTCAGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 90 bp ACCAGCTGGGCTCTATCTACAGAGAGAGCAATGGCTTCCCTTCCCTaGAAGGAAGTCTCACCCTCACAAGGACACTTGATCCGCTGCAAA +
Preference number: 2 (lower is better)
Translates to: TSWALSTERAMASLP*KEVSPSQGHLIRCK
Trigger: TTTGCAGCGGATCAAGTGTCCTTGTGAGGGTGAGACTTCCTTCAAGGGAAGGGAAGCCATTGCTCTCTCTGTAGATAGAGCCCAGCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGGCTTTGTTACCCTGTaGTATGACTGGTTAGGGGTG +
Preference number: 2 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAGFVTL*YDWLGV
Trigger: CACCCCTAACCAGTCATATCACAGGGTAACAAAGCC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTAGGGGAGATGTCCAGTaGCAAAGGACAGCTTCTATA +
Preference number: 2 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGRGDVQ*QRTASI
Trigger: TATAGAAGCTGTCCTTTGTCACTGGACATCTCCCCT...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTTCACAACTCTCTGGCTaGCTTTGCTTGCCAGCACCT +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGSQLSG*LCLPAP
Trigger: AGGTGCTGGCAAGCAAAGTCAGCCAGAGAGTTGTGA...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGGGTTGGGTTCCACTTTaGTTTGGAGTTAGCAGAGTC +
Preference number: 2 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGGWVPL*FGVSRV
Trigger: GACTCTGCTAACTCCAAATCAAAGTGGAACCCAACC...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGAACCACACCAAAGGATaGCCAGAGTGTATCTCTTCC +
Preference number: 2 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGNHTKG*PECISS
Trigger: GGAAGAGATACACTCTGGTCATCCTTTGGTGTGGTT...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGAAGTTTTGAGGTCATaGCCATTTGGATTGGGCCCG +
Preference number: 2 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAEVLRS*PFGLGP
Trigger: CGGGCCCAATCCAAATGGTCATGACCTCAAAACTTC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTCCTGGTCCTTGGGAATaGAGTGTAGGAGTTGCATTT +
Preference number: 2 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGPGPWE*SVGVAF
Trigger: AAATGCAACTCCTACACTTCATTCCCAAGGACCAGG...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGAGAGGGTCTATGGGTaGCCCGGAAAGGAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGERVYG*PGKERK
Trigger: TTTCCTTTCCTTTCCGGGTCACCCATAGACCCTCTC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGGCAAGTGGTGGTGTTTaGTCTGTCTTCAAGAGACCA +
Preference number: 2 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGASGGV*SVFKRP
Trigger: TGGTCTCTTGAAGACAGAGCAAACACCACCACTTGC...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGAACAAGGGGATTCTCTaGTACACAGTTGACCATGGC +
Preference number: 2 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGNKGIL*YTVDHG
Trigger: GCCATGGTCAACTGTGTAGCAGAGAATCCCCTTGTT...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTATTCAACCCCATTCATaGACATCAGATGTCATATCA +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSIQPHS*TSDVIS
Trigger: TGATATGACATCTGATGTGCATGAATGGGGTTGAAT...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGCTCTGGACTCTGAGTaGAAACTGGCTGCTAGCTCA +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGALDSE*KLAASS
Trigger: TGAGCTAGCAGCCAGTTTGCACTCAGAGTCCAGAGC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTCGCGGTCGCAAGTGGTaGTGTTTGCTCTGTCTTCAA +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGRGRKW*CLLCLQ
Trigger: TTGAAGACAGAGCAAACACCACCACTTGCGACCGCG...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACCTCCCGTTGACCCAGTaGGTGGCACTTCCTTCTCTA +
Preference number: 2 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHLPLTQ*VALPSL
Trigger: TAGAGAAGGAAGTGCCACCCACTGGGTCAACGGGAG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCCAATTTCTAGGTCTCTaGGCCTCTATCTGGGGCCAT +
Preference number: 2 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAQFLGL*ASIWGH
Trigger: ATGGCCCCAGATAGAGGCCCAGAGACCTAGAAATTG...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTACAAACTTGAGCCCATaGGAAATGGAGGTGCTCTCT +
Preference number: 2 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGTNLSP*EMEVLS
Trigger: AGAGAGCACCTCCATTTCCCATGGGCTCAAGTTTGT...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTGTGTTCGTATTTATCTaGTCCTGCTATCAAAGAAGT +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSVFVFI*SCYQRS
Trigger: ACTTCTTTGATAGCAGGACCAGATAAATACGAACAC...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCAAGGGGCCTCTATCCTaGTCATGTGGCTGGGCGTCT +
Preference number: 2 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIKGPLS*SCGWAS
Trigger: AGACGCCCAGCCACATGACCAGGATAGAGGCCCCTT...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTCCAGGTGGGCATCTTTaGAGACCTAAGCAGCACATC +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGPGGHL*RPKQHI
Trigger: GATGTGCTGCTTAGGTCTCCAAAGATGCCCACCTGG...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGATGACCTTGCACTCTaGGTTATCCTTCAGCAGCGA +
Preference number: 2 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQADDLAL*VILQQR
Trigger: TCGCTGCTGAAGGATAACCCAGAGTGCAAGGTCATC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGAAAAGCTCAGCCAGTaGGAGGAATGGGGTTCTGGA +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGEKLSQ*EEWGSG
Trigger: TCCAGAACCCCATTCCTCCCACTGGCTGAGCTTTTC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTTTTGGTAGCAACCCTTaGCCAGACTCCCTGCTTCTG +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGFGSNP*PDSLLL
Trigger: CAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAA...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 90 bp AAGGTAAGACTGGGTTGTCTGAGCATCCACCGAAGCGTCCTTTCATaGATGCAGATCTTGCCTCTCAGCATGTTCTCTTCCCTTCCCACC +
Preference number: 2 (lower is better)
Translates to: KVRLGCLSIHRSVLS*MQILPLSMFSSLPT
Trigger: GGTGGGAAGGGAAGAGAACATGCTGAGAGGCAAGATCTGCATCAATGAAAGGACGCTTCGGTGGATGCTCAGACAACCCAGTCTTACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCCCAAAAGTCAAGAACTaGTGGAAGAGCCACAGGATG +
Preference number: 2 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAPKVKN*WKSHRM
Trigger: CATCCTGTGGCTCTTCCATCAGTTCTTGACTTTTGG...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGGGCGTCCTCTCCCGTTaGCCCAGTGGGTGGCACTTC +
Preference number: 2 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLGVLSR*PSGWHF
Trigger: GAAGTGCCACCCACTGGGTCAACGGGAGAGGACGCC...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCAATATCATACAAACTTaGGCCCATGGGAAATGGAGG +
Preference number: 2 (lower is better)
Translates to: ERLRHAHNTDALVQTERVNIIQT*AHGKWR
Trigger: CCTCCATTTCCCATGGGCTCAAGTTTGTATGATATT...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTCAGGGAACTCACACATaGGACCTTTTGCAGAAGCTG +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGQGTHT*DLLQKL
Trigger: CAGCTTCTGCAAAAGGTCTCATGTGTGAGTTCCCTG...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCTCTGGGCTGGTGAGTTaGGCCCAGGTTGTTTACGTC +
Preference number: 2 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLISGLVS*AQVVYV
Trigger: GACGTAAACAACCTGGGCTCAACTCACCAGCCCAGA...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCACTGGCTTCAGCAACTaGCAAGAGAAAGAAGATCCC +
Preference number: 2 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQATGFSN*QEKEDP
Trigger: GGGATCTTCTTTCTCTTGTCAGTTGCTGAAGCCAGT...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTTCTCTGCTGCCTTGCTaGGGATTTTCTGGTGCTTCT +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGSLLPC*GFSGAS
Trigger: AGAAGCACCAGAAAATCCTCAGCAAGGCAGCAGAGA...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCGCAACCCTGCTGGTGTaGACCAGCTCTTCCTATCTG +
Preference number: 2 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIATLLV*TSSSYL
Trigger: CAGATAGGAAGAGCTGGTGCACACCAGCAGGGTTGC...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCTCATATATGCTATTTaGCCCATATGGTTTACTCAT +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSLIYAI*PIWFTH
Trigger: ATGAGTAAACCATATGGGGCAAATAGCATATATGAG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCTGTTTGCCAAAGAGATaGCAGCTTCTTCGAACTACT +
Preference number: 2 (lower is better)
Translates to: ERLRHAHNTDALVQTERVCLPKR*QLLRTT
Trigger: AGTAGTTCGAAGAAGCTGGCATCTCTTTGGCAAACA...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTAACTCAACTCTACCTTaGCACTGGCATCGTCTTGAT +
Preference number: 2 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGNSTLP*HWHRLD
Trigger: ATCAAGACGATGCCAGTGCCAAGGTAGAGTTGAGTT...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGCCCACCTATGAAACATaGTCCAAAAGTTTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGPTYET*SKSLAA
Trigger: TGCTGCCAAACTTTTGGACCATGTTTCATAGGTGGG...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGGAGTGCAGGTGCGGCTaGGGACAGGGTGGCCTCTTG +
Preference number: 2 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLECRCG*GQGGLL
Trigger: CAAGAGGCCACCCTGTCCCCAGCCGCACCTGCACTC...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCACACCAGCTGGAAGATaGCATGGAAGGCAACCCTGC +
Preference number: 2 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLITPAGR*HGRQPC
Trigger: GCAGGGTTGCCTTCCATGCCATCTTCCAGCTGGTGT...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTATGCCTCAGAGTGACTaGATTATGAAAAATCTTGTA +
Preference number: 2 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSMPQSD*IMKNLV
Trigger: TACAAGATTTTTCATAATCCAGTCACTCTGAGGCAT...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 90 bp AGAAAACGTCCTTCTCAGTTTGTTTTCTCTTCCACTCCTTGTGTGTaGCTGGTGGGCTGGGAAGGAAGTCCGAACAGGAAGAGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: RKRPSQFVFSSTPCV*LVGWEGSPNRKSRR
Trigger: TCTCCTGCTCTTCCTGTTCGGACTTCCTTCCCAGCCCACCAGCAACACACAAGGAGTGGAAGAGAAAACAAACTGAGAAGGACGTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 90 bp GGTTGTCTGAGCATCCACCGAAGCGTCCTTTCATTGATGCAGATCTaGCCTCTCAGCATGTTCTCTTCCCTTCCCACCTATGAAACATGG +
Preference number: 2 (lower is better)
Translates to: GCLSIHRSVLSLMQI*PLSMFSSLPTYETW
Trigger: CCATGTTTCATAGGTGGGAAGGGAAGAGAACATGCTGAGAGGCAAGATCTGCATCAATGAAAGGACGCTTCGGTGGATGCTCAGACAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGTTCCCTTCCCACCTATaGAACATGGTCCAAAAGTTT +
Preference number: 2 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGFPSHL*NMVQKF
Trigger: AAACTTTTGGACCATGTTTCATAGGTGGGAAGGGAA...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCACACACATCACAGCATaGCTCCAAGGCTCCAGTCTG +
Preference number: 2 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLITHITA*LQGSSL
Trigger: CAGACTGGAGCCTTGGAGTCATGCTGTGATGTGTGT...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTCACCAGCAGGCTCACTaGGATGACTGTGAGCGGCTC +
Preference number: 2 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFHQQAH*DDCERL
Trigger: GAGCCGCTCACAGTCATCTCAGTGAGCCTGCTGGTG...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGATAATGATAGGTCTGTaGGCCAGCATCCTCAAACAT +
Preference number: 2 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGIMIGL*ASILKH
Trigger: ATGTTTGAGGATGCTGGCTCACAGACCTATCATTAT...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCCTTGTCTATGTTAATTaGCCAAAGTTGATGCAGGAG +
Preference number: 2 (lower is better)
Translates to: ERLRHAHNTDALVQTERVLVYVN*PKLMQE
Trigger: CTCCTGCATCAACTTTGGTCAATTAACATAGACAAG...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGTCCGGCATCTTATCATaGGTGTGGATGAATATTGAG +
Preference number: 2 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGSGILS*VWMNIE
Trigger: CTCAATATTCATCCACACTCATGATAAGATGCCGGA...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCTCCTCATTTTGTAGATaGGGAAGTTCAAGTATGGAG +
Preference number: 2 (lower is better)
Translates to: ERLRHAHNTDALVQTERVSSFCR*GSSSME
Trigger: CTCCATACTTGAACTTCCTCATCTACAAAATGAGGA...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCCCTTCTCTACATCTGTaGTGCCTCAGACCCCTTCCA +
Preference number: 2 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIPSLHL*CLRPLP
Trigger: TGGAAGGGGTCTGAGGCAGCACAGATGTAGAGAAGG...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGTCATTGACCCTAAATaGCCTCATAAGGTTGGGTTC +
Preference number: 2 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAVIDPK*PHKVGF
Trigger: GAACCCAACCTTATGAGGGCATTTAGGGTCAATGAC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGGCTCAAGGTTGACTTaGATGGAGCTCAAAGCACAT +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGGSRLT*MELKAH
Trigger: ATGTGCTTTGAGCTCCATGCAAGTCAACCTTGAGCC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGGGTTCTTAAAAATCTaGCCCCTTAGTCTATCCCAC +
Preference number: 2 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAGFLKI*PLSLSH
Trigger: GTGGGATAGACTAAGGGGGCAGATTTTTAAGAACCC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCCTCAACGCAGACCAGTaGGGTTCTGTGGTGTACACT +
Preference number: 2 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLILNADQ*GSVVYT
Trigger: AGTGTACACCACAGAACCGCACTGGTCTGCGTTGAG...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTTTAAGTGTGCTTAAGTaGGACAGGTCCAGCCCTGTT +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGLSVLK*DRSSPV
Trigger: AACAGGGCTGGACCTGTCGCACTTAAGCACACTTAA...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCGGACACTTGATCCGCTaGAAAGCAGAAAGTGTGCGG +
Preference number: 2 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIGHLIR*KAESVR
Trigger: CCGCACACTTTCTGCTTTGCAGCGGATCAAGTGTCC...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTTTCGAACTACTGCTGTaGAACTCTTCATGTTCAGAC +
Preference number: 2 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGFELLL*NSSCSD
Trigger: GTCTGAACATGAAGAGTTGCACAGCAGTAGTTCGAA...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTAGGATCCTTCTCTGCTaGCTTGCTGAGGATTTTCTG +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGRILLC*LAEDFL
Trigger: CAGAAAATCCTCAGCAAGGCAGCAGAGAAGGATCCT...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCAACTCAACTCTACCTTaGCACTGGCATCGTCTTGAT +
Preference number: 2 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQANSTLP*HWHRLD
Trigger: ATCAAGACGATGCCAGTGCCAAGGTAGAGTTGAGTT...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTAGAGTGGTAGGAAGATaGGTTGGAAGACGTGTAAAT +
Preference number: 2 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGRVVGR*VGRRVN
Trigger: ATTTACACGTCTTCCAACCCATCTTCCTACCACTCT...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGCATTCTAAATGCCTCTaGGTGATGTACCTGAGTTCA +
Preference number: 2 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGHSKCL*VMYLSS
Trigger: TGAACTCAGGTACATCACCCAGAGGCATTTAGAATG...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTATGAGTGAGTTACTCTaGCTTCCGCATTCTTACATC +
Preference number: 2 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGMSELL*LPHSYI
Trigger: GATGTAAGAATGCGGAAGCCAGAGTAACTCACTCAT...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGTAGATAGAAGGCTCTaGACTCTGAGTGCAAACTGG +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGVDRRL*TLSANW
Trigger: CCAGTTTGCACTCAGAGTCCAGAGCCTTCTATCTAC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 90 bp CAAAGCATATTTGTTTATGAAACAAGGGGATTCTCTGCTACACAGTaGACCATGGCTACACCAGCTCAGGGATTCTCACCTGGCCTCCCC +
Preference number: 2 (lower is better)
Translates to: QSIFVYETRGFSATQ*TMATPAQGFSPGLP
Trigger: GGGGAGGCCAGGTGAGAATCCCTGAGCTGGTGTAGCCATGGTCAACTGTGTAGCAGAGAATCCCCTTGTTTCATAAACAAATATGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCTGTGCAGGTGTGTACTaGCACAAACGTACACAAAAT +
Preference number: 2 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQACAGVY*HKRTQN
Trigger: ATTTTGTGTACGTTTGTGTCAGTACACACCTGCACA...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCCCAAATGGATGCTTGTaGACCTGTCTGTCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIPNGCL*TCLSLP
Trigger: AGGAAGGGACAGACAGGTTCACAAGCATCCATTTGG...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCATAATGATAGGTCTGTaGGCCAGCATCCTCAAACAT +
Preference number: 2 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAIMIGL*ASILKH
Trigger: ATGTTTGAGGATGCTGGCTCACAGACCTATCATTAT...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTGGGATCAAGGTCACCTaGGAAGTCCTCCCATTGGCC +
Preference number: 2 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFGIKVT*EVLPLA
Trigger: GGCCAATGGGAGGACTTCTCAGGTGACCTTGATCCC...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGTATCATGAGTGTGGATaGATATTGAGATATAGGGCC +
Preference number: 2 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGYHECG*ILRYRA
Trigger: GGCCCTATATCTCAATATTCATCCACACTCATGATA...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGTCCTCATTTTGTAGATaGGGAAGTTCAAGTATGGAG +
Preference number: 2 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGSSFCR*GSSSME
Trigger: CTCCATACTTGAACTTCCTCATCTACAAAATGAGGA...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTCCGGCGAGATGCAGGTaGCTGAGCCAACTCAACTCT +
Preference number: 2 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFPARCR*LSQLNS
Trigger: AGAGTTGAGTTGGCTCAGGCACCTGCATCTCGCCGG...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGGGTTCTTAAAAATCTaGCCCCTTAGTCTATCCCAC +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGGFLKI*PLSLSH
Trigger: GTGGGATAGACTAAGGGGGCAGATTTTTAAGAACCC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGCTTCTTCGAACTACTaGTGTGCAACTCTTCATGTT +
Preference number: 2 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAASSNY*CATLHV
Trigger: AACATGAAGAGTTGCACAGCAGTAGTTCGAAGAAGC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTCGGCTGGGGACAGGGTaGCCTCTTGTTTCACTGGGT +
Preference number: 2 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSRLGTG*PLVSLG
Trigger: ACCCAGTGAAACAAGAGGCCACCCTGTCCCCAGCCG...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTCCCAGAGCTGTAATGTaGAGAACCACGGGGGTCCTC +
Preference number: 2 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFPRAVM*RTTGVL
Trigger: GAGGACCCCCGTGGTTCTCCACATTACAGCTCTGGG...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTTCAAAGCCCCTGCTCTaGGCTGGTGAGTTGAGCCCA +
Preference number: 2 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFSKPLL*AGELSP
Trigger: TGGGCTCAACTCACCAGCCCAGAGCAGGGGCTTTGA...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGAGACAAGCACTCATTaGGGAAGTTTTGAGGTCATG +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGETSTH*GSFEVM
Trigger: CATGACCTCAAAACTTCCCCAATGAGTGCTTGTCTC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 90 bp GTCATTGACCCTAAATGCCCTCATAAGGTTGGGTTCCACTTTGATTaGGAGTTAGCAGAGTCTGACCTACAGAGCCTCACAAGTCAAGGC +
Preference number: 2 (lower is better)
Translates to: VIDPKCPHKVGFHFD*ELAESDLQSLTSQG
Trigger: GCCTTGACTTGTGAGGCTCTGTAGGTCAGACTCTGCTAACTCCAAATCAAAGTGGAACCCAACCTTATGAGGGCATTTAGGGTCAATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCTGGAAGACGTGTAAATaGAACAGATTACACAGCAGT +
Preference number: 2 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAWKTCK*NRLHSS
Trigger: ACTGCTGTGTAATCTGTTTCATTTACACGTCTTCCA...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTACCTTTTGCAGAAGCTaGCCAGAGTCCCCGGTAAGG +
Preference number: 2 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFTFCRS*PESPVR
Trigger: CCTTACCGGGGACTCTGGTCAGCTTCTGCAAAAGGT...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCTATCATGAGTGTGGATaGATATTGAGATATAGGGCC +
Preference number: 2 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAYHECG*ILRYRA
Trigger: GGCCCTATATCTCAATATTCATCCACACTCATGATA...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCTCATGGCAGCATCAATaGAAAGAGGGCAAACACAGC +
Preference number: 2 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLISWQHQ*KEGKHS
Trigger: GCTGTGTTTGCCCTCTTTTCATTGATGCTGCCATGA...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTTTTCTCTGGGGGACCTaGATGAAGAATAGAATCCTT +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGFLWGT*MKNRIL
Trigger: AAGGATTCTATTCTTCATTCAGGTCCCCCAGAGAAA...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTCAAACGTACACAAAATaGACCAGAGAGATACACATA +
Preference number: 2 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGQTYTK*TREIHI
Trigger: TATGTGTATCTCTCTGGTGCATTTTGTGTACGTTTG...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTCCTGATGGGAAGATATaGACCTGGGCTCAGGGCGCT +
Preference number: 2 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSPDGKI*TWAQGA
Trigger: AGCGCCCTGAGCCCAGGTGCATATCTTCCCATCAGG...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTACTCTACCTTGGCACTaGCATCGTCTTGATTTAGTT +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGTLPWH*HRLDLV
Trigger: AACTAAATCAAGACGATGCCAGTGCCAAGGTAGAGT...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGCCCAGAGCTGTAATGTaGAGAACCACGGGGGTCCTC +
Preference number: 2 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLPRAVM*RTTGVL
Trigger: GAGGACCCCCGTGGTTCTCCACATTACAGCTCTGGG...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCATGCCTCAGAGTGACTaGATTATGAAAAATCTTGTA +
Preference number: 2 (lower is better)
Translates to: ERLRHAHNTDALVQTERVMPQSD*IMKNLV
Trigger: TACAAGATTTTTCATAATCCAGTCACTCTGAGGCAT...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 90 bp CATACATGTTCATATGCCAGTAAGAAGTTTGAACTTGACCTGGGGTaGCGGCTGGTGACTTTAGTGAGGTCATTGACCCTAAATGCCCTC +
Preference number: 2 (lower is better)
Translates to: HTCSYASKKFELDLG*RLVTLVRSLTLNAL
Trigger: GAGGGCATTTAGGGTCAATGACCTCACTAAAGTCACCAGCCGCAACCCCAGGTCAAGTTCAAACTTCTTACTGGCATATGAACATGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 90 bp ATCATGGCAGCATCAATGAAAAGAGGGCAAACACAGCCCCAGACATaGAGAGCTTTGAGAGACAGACACGAGAATCACGTGTGTATGTCA +
Preference number: 2 (lower is better)
Translates to: IMAASMKRGQTQPQT*RALRDRHENHVCMS
Trigger: TGACATACACACGTGATTCTCGTGTCTGTCTCTCAAAGCTCTCAATGTCTGGGGCTGTGTTTGCCCTCTTTTCATTGATGCTGCCATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 90 bp ACAAGGACACTTGATCCGCTGCAAAGCAGAAAGTGTGCGGACCCTTaGGGAAGGGCGTTCTTTTCTTGTTTAGAACCTAGGATTCTGTTT +
Preference number: 2 (lower is better)
Translates to: TRTLDPLQSRKCADP*GRAFFSCLEPRILF
Trigger: AAACAGAATCCTAGGTTCTAAACAAGAAAAGAACGCCCTTCCCAAAGGGTCCGCACACTTTCTGCTTTGCAGCGGATCAAGTGTCCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCTGGGATTCATGGCCTTaGATATCAAGAGGGAAAGGA +
Preference number: 2 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIWDSWP*ISRGKG
Trigger: TCCTTTCCCTCTTGATATTCAAGGCCATGAATCCCA...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGTAGATGCCTCAGAGTaGCTGGATTATGAAAAATCT +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGVDASE*LDYEKS
Trigger: AGATTTTTCATAATCCAGTCACTCTGAGGCATCTAC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTCTCAACGCAGACCAGTaGGGTTCTGTGGTGTACACT +
Preference number: 2 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFLNADQ*GSVVYT
Trigger: AGTGTACACCACAGAACCGCACTGGTCTGCGTTGAG...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTGGACACTTGATCCGCTaGAAAGCAGAAAGTGTGCGG +
Preference number: 2 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFGHLIR*KAESVR
Trigger: CCGCACACTTTCTGCTTTGCAGCGGATCAAGTGTCC...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCCCCACCTATGAAACATaGTCCAAAAGTTTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIPTYET*SKSLAA
Trigger: TGCTGCCAAACTTTTGGACCATGTTTCATAGGTGGG...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTGCCCTCTCCCCCAAATaGATGCTTGTGAACCTGTCT +
Preference number: 2 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFALSPK*MLVNLS
Trigger: AGACAGGTTCACAAGCATCCATTTGGGGGAGAGGGC...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTCCAGGTGGGCATCTTTaGAGACCTAAGCAGCACATC +
Preference number: 2 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFPGGHL*RPKQHI
Trigger: GATGTGCTGCTTAGGTCTCCAAAGATGCCCACCTGG...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCTTAAGGAGCAACACCTaGTCCTTGGGAATGAAGTGT +
Preference number: 2 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLILRSNT*SLGMKC
Trigger: ACACTTCATTCCCAAGGACCAGGTGTTGCTCCTTAA...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCAACCTCCTGTGTCAATaGTATCCCTCCCTTCATATC +
Preference number: 2 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLINLLCQ*YPSLHI
Trigger: GATATGAAGGGAGGGATACCATTGACACAGGAGGTT...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGTATTTATCTGGTCCTaGTATCAAAGAAGTCACTCA +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGVFIWS*YQRSHS
Trigger: TGAGTGACTTCTTTGATAGCAGGACCAGATAAATAC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTCCATTGGCCAGGACTTaGCGTCTGAAAGGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALPLART*RLKGAS
Trigger: AGAGGCCCCTTTCAGACGGCAAGTCCTGGCCAATGG...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCGCTTCTTCGAACTACTaGTGTGCAACTCTTCATGTT +
Preference number: 2 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIASSNY*CATLHV
Trigger: AACATGAAGAGTTGCACAGCAGTAGTTCGAAGAAGC...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCACTCTACCTTGGCACTaGCATCGTCTTGATTTAGTT +
Preference number: 2 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLITLPWH*HRLDLV
Trigger: AACTAAATCAAGACGATGCCAGTGCCAAGGTAGAGT...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTGTGTTGCTGGTGGGCTaGGAAGGAAGTCCGAACAGG +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALVLLVG*EGSPNR
Trigger: CCTGTTCGGACTTCCTTCCCAGCCCACCAGCAACAC...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTGGAAGGCAACCCTGCTaGTGTGCACCAGCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALGRQPC*CAPALP
Trigger: AGGAAGAGCTGGTGCACACCAGCAGGGTTGCCTTCC...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 90 bp TATATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTaGGATGCTCTTTCTCCTACCCCAGCCCAGTGCAGCAAAGCTCAG +
Preference number: 2 (lower is better)
Translates to: YMVSHKLQSNSHIIS*DALSPTPAQCSKAQ
Trigger: CTGAGCTTTGCTGCACTGGGCTGGGGTAGGAGAAAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGGGCTTTGTTACCCTGTaGTATGACTGGTTAGGGGTG +
Preference number: 2 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLGFVTL*YDWLGV
Trigger: CACCCCTAACCAGTCATATCACAGGGTAACAAAGCC...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTGTCTCTGTGACTCCATaGTCCCTGAAGTTGAAAGGG +
Preference number: 2 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSVSVTP*SLKLKG
Trigger: CCCTTTCAACTTCAGGGATCATGGAGTCACAGAGAC...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTTCATGGCAGCATCAATaGAAAGAGGGCAAACACAGC +
Preference number: 2 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFSWQHQ*KEGKHS
Trigger: GCTGTGTTTGCCCTCTTTTCATTGATGCTGCCATGA...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCAAAATACTAAGGCATTaGCCATGTGCCTTGGTTAAC +
Preference number: 2 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIKILRH*PCALVN
Trigger: GTTAACCAAGGCACATGGTCAATGCCTTAGTATTTT...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTACTGGCTTCAGCAACTaGCAAGAGAAAGAAGATCCC +
Preference number: 2 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFTGFSN*QEKEDP
Trigger: GGGATCTTCTTTCTCTTGTCAGTTGCTGAAGCCAGT...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTCCTGGTCCTTGGGAATaGAGTGTAGGAGTTGCATTT +
Preference number: 2 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFPGPWE*SVGVAF
Trigger: AAATGCAACTCCTACACTTCATTCCCAAGGACCAGG...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCATGAGAATGAGTTCATaGAAGCTCTTCACAGGAAAG +
Preference number: 2 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIMRMSS*KLFTGK
Trigger: CTTTCCTGTGAAGAGCTTTCATGAACTCATTCTCAT...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTCCAGGGATCTGTAGCTaGAGAATTGGCACCCTTATA +
Preference number: 2 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFPGICS*RIGTLI
Trigger: TATAAGGGTGCCAATTCTGCAGCTACAGATCCCTGG...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCCCTGCAGTGCTAATTTaGTCAAATGAGCCCGAGACA +
Preference number: 2 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISPAVLI*SNEPET
Trigger: TGTCTCGGGCTCATTTGAGCAAATTAGCACTGCAGG...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTCATGGAAGGCAACCCTaGTGGTGTGCACCAGCTCTT +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALHGRQP*WCAPAL
Trigger: AAGAGCTGGTGCACACCAGCAGGGTTGCCTTCCATG...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGTTTGCAAATCACTTTaGAATTTCTTTGTCACCCTT +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGVCKSL*NFFVTL
Trigger: AAGGGTGACAAAGAAATTGCAAAGTGATTTGCAAAC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTCTCATATATGCTATTTaGCCCATATGGTTTACTCAT +
Preference number: 2 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGLIYAI*PIWFTH
Trigger: ATGAGTAAACCATATGGGGCAAATAGCATATATGAG...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTCCCGAGACACTGGGGTaGATTTATTCCACCTCTGTT +
Preference number: 2 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSPETLG*IYSTSV
Trigger: AACAGAGGTGGAATAAATCCACCCCAGTGTCTCGGG...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTTCCTGGTCATGTGGCTaGGCGTCTTTTGCTTCCCAG +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALSWSCG*ASFASQ
Trigger: CTGGGAAGCAAAAGACGCCCAGCCACATGACCAGGA...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTAGCTGGAAGATGGCATaGAAGGCAACCCTGCTGGTG +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALSWKMA*KATLLV
Trigger: CACCAGCAGGGTTGCCTTCCATGCCATCTTCCAGCT...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTAAAACAGTCACACCATaGGTGGAAATGGGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFKTVTP*VEMGKE
Trigger: CTCCTTCCCCATTTCCACCCATGGTGTGACTGTTTT...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTAGAAAGGCTGCTGAGTaGCTGGCAAAGCTCCCAAAG +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALRKAAE*LAKLPK
Trigger: CTTTGGGAGCTTTGCCAGGCACTCAGCAGCCTTTCT...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTAACAACTTTTCCCGTTaGACACCTTACCCTATCGCC +
Preference number: 2 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSNNFSR*TPYPIA
Trigger: GGCGATAGGGTAAGGTGTGCAACGGGAAAAGTTGTT...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTTGGCTGGGCGTCTTTTaGTTCCCAGCAGGATCAGAT +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALWLGVF*FPAGSD
Trigger: ATCTGATCCTGCTGGGAAGCAAAAGACGCCCAGCCA...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTGGAAGAGCCACAGGATaGAAAAACTTTCCCCATCTC +
Preference number: 2 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSGRATG*KNFPHL
Trigger: GAGATGGGGAAAGTTTTTCCATCCTGTGGCTCTTCC...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTCTCTGGGCCTCTATCTaGGGCCATGAAACCACTACA +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALLWASI*GHETTT
Trigger: TGTAGTGGTTTCATGGCCCCAGATAGAGGCCCAGAG...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTACAAACTTGAGCCCATaGGAAATGGAGGTGCTCTCT +
Preference number: 2 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSTNLSP*EMEVLS
Trigger: AGAGAGCACCTCCATTTCCCATGGGCTCAAGTTTGT...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTGCGTTCACAACTCTCTaGCTGACTTTGCTTGCCAGC +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALAFTTL*LTLLAS
Trigger: GCTGGCAAGCAAAGTCAGCCAGAGAGTTGTGAACGC...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTAGGCTGCTGAGTGCCTaGCAAAGCTCCCAAAGCATA +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALRLLSA*QSSQSI
Trigger: TATGCTTTGGGAGCTTTGCCAGGCACTCAGCAGCCT...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTGCCCTCTCCCCCAAATaGATGCTTGTGAACCTGTCT +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALALSPK*MLVNLS
Trigger: AGACAGGTTCACAAGCATCCATTTGGGGGAGAGGGC...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTGAGACAAGCACTCATTaGGGAAGTTTTGAGGTCATG +
Preference number: 2 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFETSTH*GSFEVM
Trigger: CATGACCTCAAAACTTCCCCAATGAGTGCTTGTCTC...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTACAACACAGACGCACTaGTACAGACGGAGAGGGTCT +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALTTQTH*YRRRGS
Trigger: AGACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGT...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTATGGAGAAGACACAGTaGCCAGAGTCACAAATCATT +
Preference number: 2 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFMEKTQ*PESQII
Trigger: AATGATTTGTGACTCTGGGCACTGTGTCTTCTCCAT...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTGCTGAGGTTGGTGTTTaGCAAAGAGATGCCAGCTTC +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALAEVGV*QRDASF
Trigger: GAAGCTGGCATCTCTTTGGCAAACACCAACCTCAGC...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTAACATCGTATTTCCCTaGAAAGGGCTGGCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALNIVFP*KGLAVS
Trigger: GGACACAGCCAGCCCTTTCCAGGGAAATACGATGTT...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTCCAAAAGTCAAGAACTaGTGGAAGAGCCACAGGATG +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALPKVKN*WKSHRM
Trigger: CATCCTGTGGCTCTTCCATCAGTTCTTGACTTTTGG...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTTTCCCTTCCCACCTATaGAACATGGTCCAAAAGTTT +
Preference number: 2 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSFPSHL*NMVQKF
Trigger: AAACTTTTGGACCATGTTTCATAGGTGGGAAGGGAA...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTCTCTATCTGGGGCCATaGAACCACTACAGTGATAAG +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALLYLGP*NHYSDK
Trigger: CTTATCACTGTAGTGGTTTCATGGCCCCAGATAGAG...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTAGGGGAGATGTCCAGTaGCAAAGGACAGCTTCTATA +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALRGDVQ*QRTASI
Trigger: TATAGAAGCTGTCCTTTGTCACTGGACATCTCCCCT...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTGAATTCATATGTTTTTaGCGAAGCTACTGGCTTCAG +
Preference number: 2 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFEFICF*RSYWLQ
Trigger: CTGAAGCCAGTAGCTTCGTCAAAAACATATGAATTC...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTTGGAAGACGTGTAAATaGAACAGATTACACAGCAGT +
Preference number: 2 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSWKTCK*NRLHSS
Trigger: ACTGCTGTGTAATCTGTTTCATTTACACGTCTTCCA...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTCCTAATTTACCTCCATaGAGTAAGCACGCACTAGCA +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALPNLPP*SKHALA
Trigger: TGCTAGTGCGTGCTTACTGCATGGAGGTAAATTAGG...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTTTAAGGAGCAACACCTaGTCCTTGGGAATGAAGTGT +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALLRSNT*SLGMKC
Trigger: ACACTTCATTCCCAAGGACCAGGTGTTGCTCCTTAA...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTTCATTGGGGAAGTTTTaGGGTCATGACCATTTGGAT +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALSLGKF*GHDHLD
Trigger: ATCCAAATGGTCATGACCTCAAAACTTCCCCAATGA...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTGTGTTCGTATTTATCTaGTCCTGCTATCAAAGAAGT +
Preference number: 2 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSVFVFI*SCYQRS
Trigger: ACTTCTTTGATAGCAGGACCAGATAAATACGAACAC...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTGCTATTTGCCCCATATaGTTTACTCATTCTGTCACC +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALAICPI*FTHSVT
Trigger: GGTGACAGAATGAGTAAACCATATGGGGCAAATAGC...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR TCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTTTCTATAATGGGGAGTaGAGGTCTTGTTGGTTTATG +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALFYNGE*RSCWFM
Trigger: CATAAACCAACAAGACCTTCACTCCCCATTATAGAA...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTGAAAGCTTCCGTAACTaGTTGGAGTCACATGTTTTA +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALESFRN*LESHVL
Trigger: TAAAACATGTGACTCCAACCAGTTACGGAAGCTTTC...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTATTCAACCCCATTCATaGACATCAGATGTCATATCA +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALIQPHS*TSDVIS
Trigger: TGATATGACATCTGATGTGCATGAATGGGGTTGAAT...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTATTGACCATGTGCCTTaGTTAACAGTTAACTGGTTT +
Preference number: 2 (lower is better)
Translates to: MVSHKLQSNSHIISLDALIDHVP*LTVNWF
Trigger: AAACCAGTTAACTGTTAACCAAGGCACATGGTCAAT...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTGCCCCTTCAGGACGCTaGGAAGGAAGACAAAAGGCC +
Preference number: 3 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSAPSGR*EGRQKA
Trigger: GGCCTTTTGTCTTCCTTCCAAGCGTCCTGAAGGGGC...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTGTGGCTGGGCGTCTTTaGCTTCCCAGCAGGATCAGA +
Preference number: 3 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSVAGRL*LPSRIR
Trigger: TCTGATCCTGCTGGGAAGCAAAAGACGCCCAGCCAC...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTGAACTTGACCTGGGGTaGCGGCTGGTGACTTTAGTG +
Preference number: 3 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSELDLG*RLVTLV
Trigger: CACTAAAGTCACCAGCCGCAACCCCAGGTCAAGTTC...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 72 bp CAAGGTGAGGTAATGAGACTCCCCCAAGGCCCTGAGTaGGCCGGTGACAGGGCCACTCATGCCACCCCAGAG +
Preference number: 3 (lower is better)
Translates to: QGEVMRLPQGPE*AGDRATHATPE
Trigger: CTCTGGGGTGGCATGAGTGGCCCTGTCACCGGCTCACTCAGGGCCTTGGGGGAGTCTCATTACCTCACCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp CATAAGGGACATGACTGGGGCAGCGCCGACACCCTCTaGGGGCAGATGGGACATGCAGTCCACAGGAGTGGT +
Preference number: 3 (lower is better)
Translates to: HKGHDWGSADTL*GQMGHAVHRSG
Trigger: ACCACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCAGTCATGTCCCTTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCCCGGTAAGGAAGTCTaGAGTAGGGCACCCACACCT +
Preference number: 3 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSPGKEV*SRAPTP
Trigger: AGGTGTGGGTGCCCTACTCAAGACTTCCTTACCGGG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 72 bp CCTTCCACTGTCCCTTCACCACCCCATCCTCGCCAGTaGTGGGGATCAAGACGCGGTCGCAAGTGGTGGTGT +
Preference number: 3 (lower is better)
Translates to: PSTVPSPPHPRQ*WGSRRGRKWWC
Trigger: ACACCACCACTTGCGACCGCGTCTTGATCCCCATCACTGGCGAGGATGGGGTGGTGAAGGGACAGTGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 72 bp CCTGAGAAGTCCTCCCATTGGCCAGGACTTGCCGTCTaGAAGGGGCCTCTATCCTGGTCATGTGGCTGGGCG +
Preference number: 3 (lower is better)
Translates to: PEKSSHWPGLAV*KGPLSWSCGWA
Trigger: CGCCCAGCCACATGACCAGGATAGAGGCCCCTTTCAGACGGCAAGTCCTGGCCAATGGGAGGACTTCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp GGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATaGAGTCCACAGGAGTGGTCATCTCCTCTTACTAAG +
Preference number: 3 (lower is better)
Translates to: GQRRHPLGADGT*SPQEWSSPLTK
Trigger: CTTAGTAAGAGGAGATGACCACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp TCTAATCATGGGTTGGGTCACTGGCCAAGCTCGACGTaGCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTC +
Preference number: 3 (lower is better)
Translates to: SNHGLGHWPSST*LPSLGQLVFSV
Trigger: GACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGACCCAACCCATGATTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp CACAGGGTCAACTCAACGCAGACCAGTGCGGTTCTGTaGTGTACACTGCTCACATGGCCCCAGCTGCCAACC +
Preference number: 3 (lower is better)
Translates to: HRVNSTQTSAVL*CTLLTWPQLPT
Trigger: GGTTGGCAGCTGGGGCCATGTGAGCAGTGTACACCACAGAACCGCACTGGTCTGCGTTGAGTTGACCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGCCCATTGGCCAGGACTaGCCGTCTGAAAGGGGCCTC +
Preference number: 3 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGPIGQD*PSERGL
Trigger: GAGGCCCCTTTCAGACGGCAAGTCCTGGCCAATGGG...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTCCCATTGGCCAGGACTaGCCGTCTGAAAGGGGCCTC +
Preference number: 3 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGPIGQD*PSERGL
Trigger: GAGGCCCCTTTCAGACGGCAAGTCCTGGCCAATGGG...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTGGGTTCCACTTTGATTaGGAGTTAGCAGAGTCTGAC +
Preference number: 3 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSGFHFD*ELAESD
Trigger: GTCAGACTCTGCTAACTCCAAATCAAAGTGGAACCC...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTAAGTGTGCGGACCCTTaGGGAAGGGCGTTCTTTTCT +
Preference number: 3 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSKCADP*GRAFFS
Trigger: AGAAAAGAACGCCCTTCCCAAAGGGTCCGCACACTT...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCCCTCACAAGGACACTaGATCCGCTGCAAAGCAGAA +
Preference number: 3 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSPSQGH*IRCKAE
Trigger: TTCTGCTTTGCAGCGGATCAAGTGTCCTTGTGAGGG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTTCATTGATGCAGATCTaGCCTCTCAGCATGTTCTCT +
Preference number: 3 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSSLMQI*PLSMFS
Trigger: AGAGAACATGCTGAGAGGCAAGATCTGCATCAATGA...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTAGGCTCAAGGTTGACTaGCATGGAGCTCAAAGCACA +
Preference number: 3 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSRLKVD*HGAQST
Trigger: TGTGCTTTGAGCTCCATGCAAGTCAACCTTGAGCCT...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCTAGATTTGGAGGAGTaGTCCAGTCTCTGTGACTCC +
Preference number: 3 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSLDLEE*SSLCDS
Trigger: GGAGTCACAGAGACTGGACAACTCCTCCAAATCTAG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCCAGGGCCCTGCACTCTaGCTGCCAGGAACACAGGGT +
Preference number: 3 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAQGPAL*LPGTQG
Trigger: ACCCTGTGTTCCTGGCAGCAAGAGTGCAGGGCCCTG...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTAGCAACACCTGGTCCTaGGGAATGAAGTGTAGGAGT +
Preference number: 3 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSSNTWS*GMKCRS
Trigger: ACTCCTACACTTCATTCCCAAGGACCAGGTGTTGCT...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTAGAGGAAAGTTGGGATaGAAGGTGCCTCTAATCATG +
Preference number: 3 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSRGKLG*KVPLIM
Trigger: CATGATTAGAGGCACCTTCAATCCCAACTTTCCTCT...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp CTGCCAGGAACACAGGGTCAACTCAACGCAGACCAGTaGGGTTCTGTGGTGTACACTGCTCACATGGCCCCA +
Preference number: 3 (lower is better)
Translates to: LPGTQGQLNADQ*GSVVYTAHMAP
Trigger: TGGGGCCATGTGAGCAGTGTACACCACAGAACCGCACTGGTCTGCGTTGAGTTGACCCTGTGTTCCTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp CCCCTTAGTCTATCCCACACCAGCTGGAAGATGGCATaGAAGGCAACCCTGCTGGTGTGCACCAGCTCTTCC +
Preference number: 3 (lower is better)
Translates to: PLSLSHTSWKMA*KATLLVCTSSS
Trigger: GGAAGAGCTGGTGCACACCAGCAGGGTTGCCTTCCATGCCATCTTCCAGCTGGTGTGGGATAGACTAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp TCTGCCCCCTTAGTCTATCCCACACCAGCTGGAAGATaGCATGGAAGGCAACCCTGCTGGTGTGCACCAGCT +
Preference number: 3 (lower is better)
Translates to: SAPLVYPTPAGR*HGRQPCWCAPA
Trigger: AGCTGGTGCACACCAGCAGGGTTGCCTTCCATGCCATCTTCCAGCTGGTGTGGGATAGACTAAGGGGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCTCTGGCCCAGTGGCTTaGTTCTTGGTTCTGCCCTCT +
Preference number: 3 (lower is better)
Translates to: ERLRHAHNTDALVQTERVSGPVA*FLVLPS
Trigger: AGAGGGCAGAACCAAGAACAAAGCCACTGGGCCAGA...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTAGCTTCCGTAACTGGTaGGAGTCACATGTTTTAATC +
Preference number: 3 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSSFRNW*ESHVLI
Trigger: GATTAAAACATGTGACTCCAACCAGTTACGGAAGCT...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGAAGGAAGGGGGCTGCTaGGAGTCTAGGAGCCTCTCT +
Preference number: 3 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGKEGGC*ESRSLS
Trigger: AGAGAGGCTCCTAGACTCCAAGCAGCCCCCTTCCTT...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTGCAACAAAGATGACCTaGCACTCTGGGTTATCCTTC +
Preference number: 3 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSATKMT*HSGLSF
Trigger: GAAGGATAACCCAGAGTGCAAGGTCATCTTTGTTGC...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 72 bp GTCATAGACAAGCCCTCTCCCCCAAATGGATGCTTGTaGACCTGTCTGTCCCTTCCTCGGCAGAGCCCCTTC +
Preference number: 3 (lower is better)
Translates to: VIDKPSPPNGCL*TCLSLPRQSPF
Trigger: GAAGGGGCTCTGCCGAGGAAGGGACAGACAGGTTCACAAGCATCCATTTGGGGGAGAGGGCTTGTCTATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp GGGGCCTCTATCCTGGTCATGTGGCTGGGCGTCTTTTaGTTCCCAGCAGGATCAGATCCCAAAGTGTGTTCG +
Preference number: 3 (lower is better)
Translates to: GASILVMWLGVF*FPAGSDPKVCS
Trigger: CGAACACACTTTGGGATCTGATCCTGCTGGGAAGCAAAAGACGCCCAGCCACATGACCAGGATAGAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp CCCACACCAGCTGGAAGATGGCATGGAAGGCAACCCTaGTGGTGTGCACCAGCTCTTCCTATCTGCACTGAA +
Preference number: 3 (lower is better)
Translates to: PTPAGRWHGRQP*WCAPALPICTE
Trigger: TTCAGTGCAGATAGGAAGAGCTGGTGCACACCAGCAGGGTTGCCTTCCATGCCATCTTCCAGCTGGTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp AGGAAAGGCTTCGTCACGCTCACAACACAGACGCACTaGTACAGACGGAGAGGGTCTATGGGTGACCCGGAA +
Preference number: 3 (lower is better)
Translates to: RKGFVTLTTQTH*YRRRGSMGDPE
Trigger: TTCCGGGTCACCCATAGACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp GGAAAGTTGGGATTGAAGGTGCCTCTAATCATGGGTTaGGTCACTGGCCAAGCTCGACGTGCCTCCCCTCTC +
Preference number: 3 (lower is better)
Translates to: GKLGLKVPLIMG*VTGQARRASPL
Trigger: GAGAGGGGAGGCACGTCGAGCTTGGCCAGTGACCCAACCCATGATTAGAGGCACCTTCAATCCCAACTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTTCATTGATGCAGATCTaGCCTCTCAGCATGTTCTCT +
Preference number: 3 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSSLMQI*PLSMFS
Trigger: AGAGAACATGCTGAGAGGCAAGATCTGCATCAATGA...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTACTCTCTGGCTGACTTaGCTTGCCAGCACCTGCAGT +
Preference number: 3 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGTLWLT*LASTCS
Trigger: ACTGCAGGTGCTGGCAAGCAAAGTCAGCCAGAGAGT...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGTGGCTGGGCGTCTTTaGCTTCCCAGCAGGATCAGA +
Preference number: 3 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAVAGRL*LPSRIR
Trigger: TCTGATCCTGCTGGGAAGCAAAAGACGCCCAGCCAC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCAAGGAAGGGGGCTGCTaGGAGTCTAGGAGCCTCTCT +
Preference number: 3 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAKEGGC*ESRSLS
Trigger: AGAGAGGCTCCTAGACTCCAAGCAGCCCCCTTCCTT...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGAGGCTTGGAGGAGGATaGAAGCTGGAACAGGCACAG +
Preference number: 3 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGRLGGG*KLEQAQ
Trigger: CTGTGCCTGTTCCAGCTTCAATCCTCCTCCAAGCCT...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTCAGGAGAGGCAAGCATaGCTAGGTGGGACCACTCAT +
Preference number: 3 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGQERQA*LGGTTH
Trigger: ATGAGTGGTCCCACCTAGCAATGCTTGCCTCTCCTG...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTTTGCATTTGCTGAGGTaGGTGTTTGCCAAAGAGATG +
Preference number: 3 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSLHLLR*VFAKEM
Trigger: CATCTCTTTGGCAAACACCAACCTCAGCAAATGCAA...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 72 bp TGGTCAAGCCCTTATGCTAGAGGGATCAAGGTCACCTaGGAAGTCCTCCCATTGGCCAGGACTTGCCGTCTG +
Preference number: 3 (lower is better)
Translates to: WSSPYARGIKVT*EVLPLARTCRL
Trigger: CAGACGGCAAGTCCTGGCCAATGGGAGGACTTCTCAGGTGACCTTGATCCCTCTAGCATAAGGGCTTGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp AGAGATGAGGCAACACAAAGTCCGGCGAGATGCAGGTaGCTGAGCCAACTCAACTCTACCTTGGCACTGGCA +
Preference number: 3 (lower is better)
Translates to: RDEATQSPARCR*LSQLNSTLALA
Trigger: TGCCAGTGCCAAGGTAGAGTTGAGTTGGCTCAGGCACCTGCATCTCGCCGGACTTTGTGTTGCCTCATCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp CACACGCACACACACACCACTCCAGGGATCTGTAGCTaGAGAATTGGCACCCTTATAGGCCTGTCCCTCATG +
Preference number: 3 (lower is better)
Translates to: HTHTHTTPGICS*RIGTLIGLSLM
Trigger: CATGAGGGACAGGCCTATAAGGGTGCCAATTCTGCAGCTACAGATCCCTGGAGTGGTGTGTGTGTGCGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp CGGTTCTGTGGTGTACACTGCTCACATGGCCCCAGCTaGCAACCCAGAGACAAGCACTCATTGGGGAAGTTT +
Preference number: 3 (lower is better)
Translates to: RFCGVHCSHGPS*QPRDKHSLGKF
Trigger: AAACTTCCCCAATGAGTGCTTGTCTCTGGGTTGGCAGCTGGGGCCATGTGAGCAGTGTACACCACAGAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp CAGCAGACTCCCACCCCTACAGCGTTCACAACTCTCTaGCTGACTTTGCTTGCCAGCACCTGCAGTGCTAAT +
Preference number: 3 (lower is better)
Translates to: QQTPTPTAFTTL*LTLLASTCSAN
Trigger: ATTAGCACTGCAGGTGCTGGCAAGCAAAGTCAGCCAGAGAGTTGTGAACGCTGTAGGGGTGGGAGTCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp CAACACAGACGCACTGGTACAGACGGAGAGGGTCTATaGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAG +
Preference number: 3 (lower is better)
Translates to: QHRRTGTDGEGL*VTRKGKEKLSQ
Trigger: CTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAGACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp CCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTaGTCATCTCCTCTTACTAAGCAGGTGAAGCAGAAC +
Preference number: 3 (lower is better)
Translates to: PLGADGTCSPQE*SSPLTKQVKQN
Trigger: GTTCTGCTTCACCTGCTTAGTAAGAGGAGATGACCACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTCGCAAGTGGTGGTGTTaGCTCTGTCTTCAAGAGACC +
Preference number: 3 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGRKWWC*LCLQET
Trigger: GGTCTCTTGAAGACAGAGCAAACACCACCACTTGCG...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCTGGCGTCCTCTCCCGTaGACCCAGTGGGTGGCACTT +
Preference number: 3 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIWRPLP*TQWVAL
Trigger: AAGTGCCACCCACTGGGTCAACGGGAGAGGACGCCA...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTTGGGGAGTGAAGGTCTaGTTGGTTTATGTTCTTGTA +
Preference number: 3 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSWGVKV*LVYVLV
Trigger: TACAAGAACATAAACCAACAAGACCTTCACTCCCCA...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp CATCTCAGAGATGAGGCAACACAAAGTCCGGCGAGATaGAGGTGCCTGAGCCAACTCAACTCTACCTTGGCA +
Preference number: 3 (lower is better)
Translates to: HLRDEATQSPAR*RCLSQLNSTLA
Trigger: TGCCAAGGTAGAGTTGAGTTGGCTCAGGCACCTGCATCTCGCCGGACTTTGTGTTGCCTCATCTCTGAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp ACCCACATCTTCTGCCTACTGCCTCCACGCCACCACTaGCTCCACCATCTTCAGTCTTATTTGGTAGCAACC +
Preference number: 3 (lower is better)
Translates to: THIFCLLPPRHH*LHHLQSYLVAT
Trigger: GGTTGCTACCAAATAAGACTGAAGATGGTGGAGGCAGTGGTGGCGTGGAGGCAGTAGGCAGAAGATGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp ACACCAGCTGGAAGATGGCATGGAAGGCAACCCTGCTaGTGTGCACCAGCTCTTCCTATCTGCACTGAAATC +
Preference number: 3 (lower is better)
Translates to: TPAGRWHGRQPC*CAPALPICTEI
Trigger: GATTTCAGTGCAGATAGGAAGAGCTGGTGCACACCAGCAGGGTTGCCTTCCATGCCATCTTCCAGCTGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCCGCAAGTGGTGGTGTTaGCTCTGTCTTCAAGAGACC +
Preference number: 3 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQARKWWC*LCLQET
Trigger: GGTCTCTTGAAGACAGAGCAAACACCACCACTTGCG...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACTCCACTCCTTGTGTGTaGCTGGTGGGCTGGGAAGGA +
Preference number: 3 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHSTPCV*LVGWEG
Trigger: TCCTTCCCAGCCCACCAGCAACACACAAGGAGTGGA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTGGAGTGAAGGTCTTGTaGGTTTATGTTCTTGTACAA +
Preference number: 3 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSGVKVL*VYVLVQ
Trigger: TTGTACAAGAACATAAACCAACAAGACCTTCACTCC...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGAGGCTCAAGGTTGACTaGCATGGAGCTCAAAGCACA +
Preference number: 3 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGRLKVD*HGAQST
Trigger: TGTGCTTTGAGCTCCATGCAAGTCAACCTTGAGCCT...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGGATATCCTACCCTCTaGTCACAGGAGAGGCAAGCA +
Preference number: 3 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAGYPTL*SQERQA
Trigger: TGCTTGCCTCTCCTGTGACAAGAGGGTAGGATATCC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCCTTCCCCCAGATATTaGAAAAATCACTTAACACTC +
Preference number: 3 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSPSPRY*KNHLTL
Trigger: GAGTGTTAAGTGATTTTTCAAATATCTGGGGGAAGG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCATGGCTTCCCTTCCCTaGAAGGAAGTCTCACCCTCA +
Preference number: 3 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAMASLP*KEVSPS
Trigger: TGAGGGTGAGACTTCCTTCAAGGGAAGGGAAGCCAT...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 72 bp AGCCACAGGATGGAAAAACTTTCCCCATCTCAGAGATaGGGCAACACAAAGTCCGGCGAGATGCAGGTGCCT +
Preference number: 3 (lower is better)
Translates to: SHRMEKLSPSQR*GNTKSGEMQVP
Trigger: AGGCACCTGCATCTCGCCGGACTTTGTGTTGCCTCATCTCTGAGATGGGGAAAGTTTTTCCATCCTGTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 72 bp TGCCAACCCAGAGACAAGCACTCATTGGGGAAGTTTTaGGGTCATGACCATTTGGATTGGGCCCGCGGTAGA +
Preference number: 3 (lower is better)
Translates to: CQPRDKHSLGKF*GHDHLDWARGR
Trigger: TCTACCGCGGGCCCAATCCAAATGGTCATGACCTCAAAACTTCCCCAATGAGTGCTTGTCTCTGGGTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp GTTTTCTCTTCCACTCCTTGTGTGTTGCTGGTGGGCTaGGAAGGAAGTCCGAACAGGAAGAGCAGGAGAAGA +
Preference number: 3 (lower is better)
Translates to: VFSSTPCVLLVG*EGSPNRKSRRR
Trigger: TCTTCTCCTGCTCTTCCTGTTCGGACTTCCTTCCCAGCCCACCAGCAACACACAAGGAGTGGAAGAGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp TACCCTCTTGTCACAGGAGAGGCAAGCATTGCTAGGTaGGACCACTCATCCCTGATGGGAAGATATGCACCT +
Preference number: 3 (lower is better)
Translates to: YPLVTGEASIAR*DHSSLMGRYAP
Trigger: AGGTGCATATCTTCCCATCAGGGATGAGTGGTCCCACCTAGCAATGCTTGCCTCTCCTGTGACAAGAGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp TTAAAAATCTGCCCCCTTAGTCTATCCCACACCAGCTaGAAGATGGCATGGAAGGCAACCCTGCTGGTGTGC +
Preference number: 3 (lower is better)
Translates to: LKICPLSLSHTS*KMAWKATLLVC
Trigger: GCACACCAGCAGGGTTGCCTTCCATGCCATCTTCCAGCTGGTGTGGGATAGACTAAGGGGGCAGATTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp ACGGTAGATAGAAGGCTCTGGACTCTGAGTGCAAACTaGCTGCTAGCTCAAGGTCACTTTCTGAGGGGCGAA +
Preference number: 3 (lower is better)
Translates to: TVDRRLWTLSAN*LLAQGHFLRGE
Trigger: TTCGCCCCTCAGAAAGTGACCTTGAGCTAGCAGCCAGTTTGCACTCAGAGTCCAGAGCCTTCTATCTACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGAAGGTAAGACTGGGTaGTCTGAGCATCCACCGAAG +
Preference number: 3 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGEGKTG*SEHPPK
Trigger: CTTCGGTGGATGCTCAGACAACCCAGTCTTACCTTC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCAGTCTTTGTCTAGATTaGGAGGAGTTGTCCAGTCTC +
Preference number: 3 (lower is better)
Translates to: ERLRHAHNTDALVQTERVSLCLD*EELSSL
Trigger: GAGACTGGACAACTCCTCCAAATCTAGACAAAGACT...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGAAGATCCCAGCTCCTaGAGACTTGGTCTCATCCTA +
Preference number: 3 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAEDPSS*RLGLIL
Trigger: TAGGATGAGACCAAGTCTCAAGGAGCTGGGATCTTC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTCCCTCACAAGGACACTaGATCCGCTGCAAAGCAGAA +
Preference number: 3 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGPSQGH*IRCKAE
Trigger: TTCTGCTTTGCAGCGGATCAAGTGTCCTTGTGAGGG...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTTGGCGTCCTCTCCCGTaGACCCAGTGGGTGGCACTT +
Preference number: 3 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFWRPLP*TQWVAL
Trigger: AAGTGCCACCCACTGGGTCAACGGGAGAGGACGCCA...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCTCTGGCCCAGTGGCTTaGTTCTTGGTTCTGCCCTCT +
Preference number: 3 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLISGPVA*FLVLPS
Trigger: AGAGGGCAGAACCAAGAACAAAGCCACTGGGCCAGA...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTAATGCCCTCATAAGGTaGGGTTCCACTTTGATTTGG +
Preference number: 3 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGNALIR*GSTLIW
Trigger: CCAAATCAAAGTGGAACCCAACCTTATGAGGGCATT...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 72 bp GGTTACATTCTAGGAACTGAGGGCTTTGTTACCCTGTaGTATGACTGGTTAGGGGTGGCGTCCTCTCCCGTT +
Preference number: 3 (lower is better)
Translates to: GYILGTEGFVTL*YDWLGVASSPV
Trigger: AACGGGAGAGGACGCCACCCCTAACCAGTCATATCACAGGGTAACAAAGCCCTCAGTTCCTAGAATGTAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 72 bp TTGCTTGCCAGCACCTGCAGTGCTAATTTGCTCAAATaGGCCCGAGACACTGGGGTGGATTTATTCCACCTC +
Preference number: 3 (lower is better)
Translates to: LLASTCSANLLK*ARDTGVDLFHL
Trigger: GAGGTGGAATAAATCCACCCCAGTGTCTCGGGCTCATTTGAGCAAATTAGCACTGCAGGTGCTGGCAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp TTAGAACCCCAACTGGAAGCTAACAACTTTTCCCGTTaGACACCTTACCCTATCGCCCAGCACACCCACACA +
Preference number: 3 (lower is better)
Translates to: LEPQLEANNFSR*TPYPIAQHTHT
Trigger: TGTGTGGGTGTGCTGGGCGATAGGGTAAGGTGTGCAACGGGAAAAGTTGTTAGCTTCCAGTTGGGGTTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGAACGTCCTTCTCAGTTaGTTTTCTCTTCCACTCCTT +
Preference number: 3 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGNVLLS*FSLPLL
Trigger: AAGGAGTGGAAGAGAAAACAAACTGAGAAGGACGTT...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACCGAAGCGTCCTTTCATaGATGCAGATCTTGCCTCTC +
Preference number: 3 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHRSVLS*MQILPL
Trigger: GAGAGGCAAGATCTGCATCAATGAAAGGACGCTTCG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGTGTTGGTTTATGTTCTaGTACAACAGCAACCAGAGC +
Preference number: 3 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGCWFMF*YNSNQS
Trigger: GCTCTGGTTGCTGTTGTACAAGAACATAAACCAACA...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTACTTTAGTGAGGTCATaGACCCTAAATGCCCTCATA +
Preference number: 3 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGTLVRS*TLNALI
Trigger: TATGAGGGCATTTAGGGTCAATGACCTCACTAAAGT...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTATGCCAGTAAGAAGTTaGAACTTGACCTGGGGTTGC +
Preference number: 3 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGMPVRS*NLTWGC
Trigger: GCAACCCCAGGTCAAGTTCAAACTTCTTACTGGCAT...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCCTTTCAGAATCTGATTaGCTTCCACCCATTCCTTTT +
Preference number: 3 (lower is better)
Translates to: ERLRHAHNTDALVQTERVLSESD*LPPIPF
Trigger: AAAAGGAATGGGTGGAAGCAAATCAGATTCTGAAAG...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCTTGCATTTGCTGAGGTaGGTGTTTGCCAAAGAGATG +
Preference number: 3 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQALHLLR*VFAKEM
Trigger: CATCTCTTTGGCAAACACCAACCTCAGCAAATGCAA...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 72 bp TGTCCTATACAGCAACCAGTAGTCAGGTGTGGCTATTaGACACTGGAAATAGGGCTGGGCCAGACTGAGATG +
Preference number: 3 (lower is better)
Translates to: CPIQQPVVRCGY*TLEIGLGQTEM
Trigger: CATCTCAGTCTGGCCCAGCCCTATTTCCAGTGTTCAATAGCCACACCTGACTACTGGTTGCTGTATAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp AGGCAACCCTGCTGGTGTGCACCAGCTCTTCCTATCTaGACTGAAATCACCTCTCACTCAGAAACATCGTAT +
Preference number: 3 (lower is better)
Translates to: RQPCWCAPALPI*TEITSHSETSY
Trigger: ATACGATGTTTCTGAGTGAGAGGTGATTTCAGTGCAGATAGGAAGAGCTGGTGCACACCAGCAGGGTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp TTCTCTGCTGCCTTGCTGAGGATTTTCTGGTGCTTCTaGCATCTGTCCTTCCCAAAGCTCCGTTCATCTTAC +
Preference number: 3 (lower is better)
Translates to: FSAALLRIFWCF*HLSFPKLRSSY
Trigger: GTAAGATGAACGGAGCTTTGGGAAGGACAGATGGCAGAAGCACCAGAAAATCCTCAGCAAGGCAGCAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp TTGCTGCCTCCAAGGGCAGAGGCATTGTTAGAATCCTaGAGTACACACCACTCCTTGTCTGACCAATCAGAA +
Preference number: 3 (lower is better)
Translates to: LLPPRAEALLES*STHHSLSDQSE
Trigger: TTCTGATTGGTCAGACAAGGAGTGGTGTGTACTGCAGGATTCTAACAATGCCTCTGCCCTTGGAGGCAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp CCCTCAGCTACCTCACAGCCAGAAAGCTTCCGTAACTaGTTGGAGTCACATGTTTTAATCTGTGGTCAAGCC +
Preference number: 3 (lower is better)
Translates to: PSATSQPESFRN*LESHVLICGQA
Trigger: GGCTTGACCACAGATTAAAACATGTGACTCCAACCAGTTACGGAAGCTTTCTGGCTGTGAGGTAGCTGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCCGAAGCGTCCTTTCATaGATGCAGATCTTGCCTCTC +
Preference number: 3 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIRSVLS*MQILPL
Trigger: GAGAGGCAAGATCTGCATCAATGAAAGGACGCTTCG...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGGGAGTGAAGGTCTTGTaGGTTTATGTTCTTGTACAA +
Preference number: 3 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGGVKVL*VYVLVQ
Trigger: TTGTACAAGAACATAAACCAACAAGACCTTCACTCC...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCCAATATCATACAAACTaGAGCCCATGGGAAATGGAG +
Preference number: 3 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAQYHTN*SPWEME
Trigger: CTCCATTTCCCATGGGCTCAAGTTTGTATGATATTG...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGCGCTTAAGAAAGTCTTaGTCTAGATTTGGAGGAGTT +
Preference number: 3 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGRLRKS*SRFGGV
Trigger: AACTCCTCCAAATCTAGACAAAGACTTTCTTAAGCG...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGTTCATTATTCTGAATTaGACCCAGGTGGGCATCTTT +
Preference number: 3 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGFIILN*TQVGIF
Trigger: AAAGATGCCCACCTGGGTCAAATTCAGAATAATGAA...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 72 bp GGGTGGAAATGGGGAAGGAGTATGAGAATGAGTTCATaGAAGCTCTTCACAGGAAAGGCTTCGTCACGCTCA +
Preference number: 3 (lower is better)
Translates to: GWKWGRSMRMSS*KLFTGKASSRS
Trigger: TGAGCGTGACGAAGCCTTTCCTGTGAAGAGCTTTCATGAACTCATTCTCATACTCCTTCCCCATTTCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp GCGGCTGGTGACTTTAGTGAGGTCATTGACCCTAAATaGCCTCATAAGGTTGGGTTCCACTTTGATTTGGAG +
Preference number: 3 (lower is better)
Translates to: AAGDFSEVIDPK*PHKVGFHFDLE
Trigger: CTCCAAATCAAAGTGGAACCCAACCTTATGAGGGCATTTAGGGTCAATGACCTCACTAAAGTCACCAGCCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp ATGCAGTCAGTTTCAGTGAAGTCCCCAAATGCTCTCTaGTTCCTCAGTCCTTTCAAAGTCACAGGAACCTGG +
Preference number: 3 (lower is better)
Translates to: MQSVSVKSPNAL*FLSPFKVTGTW
Trigger: CCAGGTTCCTGTGACTTTGAAAGGACTGAGGAAGCAGAGAGCATTTGGGGACTTCACTGAAACTGACTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp CCCGAGACACTGGGGTGGATTTATTCCACCTCTGTTTaGGTGCTAGCCACTAAGACTGTTATTTTGGGATTC +
Preference number: 3 (lower is better)
Translates to: PETLGWIYSTSV*VLATKTVILGF
Trigger: GAATCCCAAAATAACAGTCTTAGTGGCTAGCACCCAAACAGAGGTGGAATAAATCCACCCCAGTGTCTCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTAACGTCCTTCTCAGTTaGTTTTCTCTTCCACTCCTT +
Preference number: 3 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGNVLLS*FSLPLL
Trigger: AAGGAGTGGAAGAGAAAACAAACTGAGAAGGACGTT...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGACTAAGACTGTTATTTaGGGATTCATGGCCTTGAAT +
Preference number: 3 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGTKTVI*GFMALN
Trigger: ATTCAAGGCCATGAATCCCAAAATAACAGTCTTAGT...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCACTCTCTGGCTGACTTaGCTTGCCAGCACCTGCAGT +
Preference number: 3 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISTLWLT*LASTCS
Trigger: ACTGCAGGTGCTGGCAAGCAAAGTCAGCCAGAGAGT...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTGCCCCAGGCTCAAGGTaGACTTGCATGGAGCTCAAA +
Preference number: 3 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFAPGSR*TCMELK
Trigger: TTTGAGCTCCATGCAAGTCAACCTTGAGCCTGGGGC...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCCGCTTAAGAAAGTCTTaGTCTAGATTTGGAGGAGTT +
Preference number: 3 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQARLRKS*SRFGGV
Trigger: AACTCCTCCAAATCTAGACAAAGACTTTCTTAAGCG...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGACATCTATGATTAGATaGAGATGGCAACTGACCAAA +
Preference number: 3 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGTSMIR*RWQLTK
Trigger: TTTGGTCAGTTGCCATCTCAATCTAATCATAGATGT...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCCTTTCAGAATCTGATTaGCTTCCACCCATTCCTTTT +
Preference number: 3 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQALSESD*LPPIPF
Trigger: AAAAGGAATGGGTGGAAGCAAATCAGATTCTGAAAG...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTAGGCTTGGAGGAGGATaGAAGCTGGAACAGGCACAG +
Preference number: 3 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSRLGGG*KLEQAQ
Trigger: CTGTGCCTGTTCCAGCTTCAATCCTCCTCCAAGCCT...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 72 bp TGGTCCTTGGGAATGAAGTGTAGGAGTTGCATTTGCTaGGGTTGGTGTTTGCCAAAGAGATGCCAGCTTCTT +
Preference number: 3 (lower is better)
Translates to: WSLGMKCRSCIC*GWCLPKRCQLL
Trigger: AAGAAGCTGGCATCTCTTTGGCAAACACCAACCTCAGCAAATGCAACTCCTACACTTCATTCCCAAGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp GCTGGTGAGTTGAGCCCAGGTTGTTTACGTCTTTCCTaGGAGCTTTCTAACATTTCAGGAACTCTCAAGGTT +
Preference number: 3 (lower is better)
Translates to: AGELSPGCLRLS*ELSNISGTLKV
Trigger: AACCTTGAGAGTTCCTGAAATGTTAGAAAGCTCCCAGGAAAGACGTAAACAACCTGGGCTCAACTCACCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp AAGGAATCTGAGAATGAAACGGTAGATAGAAGGCTCTaGACTCTGAGTGCAAACTGGCTGCTAGCTCAAGGT +
Preference number: 3 (lower is better)
Translates to: KESENETVDRRL*TLSANWLLAQG
Trigger: ACCTTGAGCTAGCAGCCAGTTTGCACTCAGAGTCCAGAGCCTTCTATCTACCGTTTCATTCTCAGATTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTGAAGGTAAGACTGGGTaGTCTGAGCATCCACCGAAG +
Preference number: 3 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSEGKTG*SEHPPK
Trigger: CTTCGGTGGATGCTCAGACAACCCAGTCTTACCTTC...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCTGTTGGTTTATGTTCTaGTACAACAGCAACCAGAGC +
Preference number: 3 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLICWFMF*YNSNQS
Trigger: GCTCTGGTTGCTGTTGTACAAGAACATAAACCAACA...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTTTCTCTGCTACACAGTaGACCATGGCTACACCAGCT +
Preference number: 3 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFFSATQ*TMATPA
Trigger: AGCTGGTGTAGCCATGGTCAACTGTGTAGCAGAGAA...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTTGTTTGCAAATCACTTaGCAATTTCTTTGTCACCCT +
Preference number: 3 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGCLQIT*QFLCHP
Trigger: AGGGTGACAAAGAAATTGCAAAGTGATTTGCAAACA...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTAGCAACACCTGGTCCTaGGGAATGAAGTGTAGGAGT +
Preference number: 3 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFSNTWS*GMKCRS
Trigger: ACTCCTACACTTCATTCCCAAGGACCAGGTGTTGCT...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 72 bp ACAATTTCTAGGTCTCTGGGCCTCTATCTGGGGCCATaGAACCACTACAGTGATAAGAGAGACAACAGTCAT +
Preference number: 3 (lower is better)
Translates to: TISRSLGLYLGP*NHYSDKRDNSH
Trigger: ATGACTGTTGTCTCTCTTATCACTGTAGTGGTTTCATGGCCCCAGATAGAGGCCCAGAGACCTAGAAATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 72 bp GGAAATAAAAGTTGCAATGGGCCCCAGGCTCAAGGTTaGCTTGCATGGAGCTCAAAGCACATACATGTTCAT +
Preference number: 3 (lower is better)
Translates to: GNKSCNGPQAQG*LAWSSKHIHVH
Trigger: ATGAACATGTATGTGCTTTGAGCTCCATGCAAGTCAACCTTGAGCCTGGGGCCCATTGCAACTTTTATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 72 bp GCAATAATCTGGTGGGCCATAAACACTCCAGGCGTTTaGGAGTTTTGTCAGTTATGGTCCCTGTCTAATGAC +
Preference number: 3 (lower is better)
Translates to: AIIWWAINTPGV*EFCQLWSLSND
Trigger: GTCATTAGACAGGGACCATAACTGACAAAACTCTCAAACGCCTGGAGTGTTTATGGCCCACCAGATTATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp GTGTTTGCCAAAGAGATGCCAGCTTCTTCGAACTACTaGTGTGCAACTCTTCATGTTCAGACCCAGTTTTCT +
Preference number: 3 (lower is better)
Translates to: VFAKEMPASSNY*CATLHVQTQFS
Trigger: AGAAAACTGGGTCTGAACATGAAGAGTTGCACAGCAGTAGTTCGAAGAAGCTGGCATCTCTTTGGCAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp CATGCCACCCCAGAGTCAGGTCTTTGTCATGACCCTTaGCATGACCCTTCAAACATTGCTGATTTACTTTTA +
Preference number: 3 (lower is better)
Translates to: HATPESGLCHDP*HDPSNIADLLL
Trigger: TAAAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTGACTCTGGGGTGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp AGTAGCAGAGAGAAAACATCTCCTAATTTACCTCCATaGAGTAAGCACGCACTAGCAAGGGCTCAAAGTCTC +
Preference number: 3 (lower is better)
Translates to: SSREKTSPNLPP*SKHALARAQSL
Trigger: GAGACTTTGAGCCCTTGCTAGTGCGTGCTTACTGCATGGAGGTAAATTAGGAGATGTTTTCTCTCTGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp CTCAGCATGTTCTCTTCCCTTCCCACCTATGAAACATaGTCCAAAAGTTTGGCAGCAAAGAGAAAACGTCCT +
Preference number: 3 (lower is better)
Translates to: LSMFSSLPTYET*SKSLAAKRKRP
Trigger: AGGACGTTTTCTCTTTGCTGCCAAACTTTTGGACCATGTTTCATAGGTGGGAAGGGAAGAGAACATGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTGCCCCAGGCTCAAGGTaGACTTGCATGGAGCTCAAA +
Preference number: 3 (lower is better)
Translates to: MVSHKLQSNSHIISLDALAPGSR*TCMELK
Trigger: TTTGAGCTCCATGCAAGTCAACCTTGAGCCTGGGGC...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 72 bp GTGCATTCATTTCCGGCATCTTATCATGAGTGTGGATaGATATTGAGATATAGGGCCCAGTCTCAGAGTCCT +
Preference number: 3 (lower is better)
Translates to: VHSFPASYHECG*ILRYRAQSQSP
Trigger: AGGACTCTGAGACTGGGCCCTATATCTCAATATTCATCCACACTCATGATAAGATGCCGGAAATGAATGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp GTGTGCAGGTGTGTACTGACACAAACGTACACAAAATaGACCAGAGAGATACACATACAGAGAGATCCACAT +
Preference number: 3 (lower is better)
Translates to: VCRCVLTQTYTK*TREIHIQRDPH
Trigger: ATGTGGATCTCTCTGTATGTGTATCTCTCTGGTGCATTTTGTGTACGTTTGTGTCAGTACACACCTGCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp CACATCCTCCCACTAAATCAAGACAGCTACACACAGTaGATTCATTTCCGGCATCTTATCATGAGTGTGGAT +
Preference number: 3 (lower is better)
Translates to: HILPLNQDSYTQ*IHFRHLIMSVD
Trigger: ATCCACACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAGTGGGAGGATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp TGCCAAAGAGATGCCAGCTTCTTCGAACTACTGCTGTaGAACTCTTCATGTTCAGACCCAGTTTTCTGTTTT +
Preference number: 3 (lower is better)
Translates to: CQRDASFFELLL*NSSCSDPVFCF
Trigger: AAAACAGAAAACTGGGTCTGAACATGAAGAGTTGCACAGCAGTAGTTCGAAGAAGCTGGCATCTCTTTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp GATTACACAGCAGTGGAAGAAAGGCTGCTGAGTGCCTaGCAAAGCTCCCAAAGCATATTTGTTTATGAAACA +
Preference number: 3 (lower is better)
Translates to: DYTAVEERLLSA*QSSQSIFVYET
Trigger: TGTTTCATAAACAAATATGCTTTGGGAGCTTTGCCAGGCACTCAGCAGCCTTTCTTCCACTGCTGTGTAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp GTTCATTATTCTGAATTTGACCCAGGTGGGCATCTTTaGAGACCTAAGCAGCACATCCTCCCACTAAATCAA +
Preference number: 3 (lower is better)
Translates to: VHYSEFDPGGHL*RPKQHILPLNQ
Trigger: TTGATTTAGTGGGAGGATGTGCTGCTTAGGTCTCCAAAGATGCCCACCTGGGTCAAATTCAGAATAATGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTGTAAGAAGTTTGAACTaGACCTGGGGTTGCGGCTGG +
Preference number: 3 (lower is better)
Translates to: MVSHKLQSNSHIISLDALVRSLN*TWGCGW
Trigger: CCAGCCGCAACCCCAGGTCAAGTTCAAACTTCTTAC...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCTTTATTTTTCATATTTaGATGCCAGGGAGCCACAGA +
Preference number: 3 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIFIFHI*MPGSHR
Trigger: TCTGTGGCTCCCTGGCATCAAAATATGAAAAATAAA...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTGGATATCCTACCCTCTaGTCACAGGAGAGGCAAGCA +
Preference number: 3 (lower is better)
Translates to: MVSHKLQSNSHIISLDALGYPTL*SQERQA
Trigger: TGCTTGCCTCTCCTGTGACAAGAGGGTAGGATATCC...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCACATCTATGATTAGATaGAGATGGCAACTGACCAAA +
Preference number: 3 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLITSMIR*RWQLTK
Trigger: TTTGGTCAGTTGCCATCTCAATCTAATCATAGATGT...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCGCTACATCATTGCATTaGTTTAATCTCAATCTCCCT +
Preference number: 3 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIATSLH*FNLNLP
Trigger: AGGGAGATTGAGATTAAACAAATGCAATGATGTAGC...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 72 bp TGTCCAGTGACAAAGGACAGCTTCTATAATGGGGAGTaGAGGTCTTGTTGGTTTATGTTCTTGTACAACAGC +
Preference number: 3 (lower is better)
Translates to: CPVTKDSFYNGE*RSCWFMFLYNS
Trigger: GCTGTTGTACAAGAACATAAACCAACAAGACCTTCACTCCCCATTATAGAAGCTGTCCTTTGTCACTGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 72 bp ATTGGTGAGATGATATTAGCAGGTGACTGGCCCAGGTaGCGAAATGTTGTAGAGATCTTTGTTCTTGACAGA +
Preference number: 3 (lower is better)
Translates to: IGEMILAGDWPR*RNVVEIFVLDR
Trigger: TCTGTCAAGAACAAAGATCTCTACAACATTTCGTCACCTGGGCCAGTCACCTGCTAATATCATCTCACCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp GAGACAGCTGTTTATGCTGCAGATTTACCTAATCCCTaGTCCTCTTTCCTACTTCCTATTACTTCAGGGTTA +
Preference number: 3 (lower is better)
Translates to: ETAVYAADLPNP*SSFLLPITSGL
Trigger: TAACCCTGAAGTAATAGGAAGTAGGAAAGAGGAGCAGGGATTAGGTAAATCTGCAGCATAAACAGCTGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp TTTAAATTGCATATGTGGCTTGGATCATGGTTCCATTaGATGACGCTGGTCTATACTACCTTCCTGAAGCTG +
Preference number: 3 (lower is better)
Translates to: FKLHMWLGSWFH*MTLVYTTFLKL
Trigger: CAGCTTCAGGAAGGTAGTATAGACCAGCGTCATCCAATGGAACCATGATCCAAGCCACATATGCAATTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTTGGGGAGTGAAGGTCTaGTTGGTTTATGTTCTTGTA +
Preference number: 3 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFWGVKV*LVYVLV
Trigger: TACAAGAACATAAACCAACAAGACCTTCACTCCCCA...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTCTAGATTTGGAGGAGTaGTCCAGTCTCTGTGACTCC +
Preference number: 3 (lower is better)
Translates to: MVSHKLQSNSHIISLDALLDLEE*SSLCDS
Trigger: GGAGTCACAGAGACTGGACAACTCCTCCAAATCTAG...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTAGTCTTTGTCTAGATTaGGAGGAGTTGTCCAGTCTC +
Preference number: 3 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSSLCLD*EELSSL
Trigger: GAGACTGGACAACTCCTCCAAATCTAGACAAAGACT...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp CTGACAAGAGAAAGAAGATCCCAGCTCCTTGAGACTTaGTCTCATCCTAAACTTGAAAGATCATTGAAACCT +
Preference number: 3 (lower is better)
Translates to: LTRERRSQLLET*SHPKLERSLKP
Trigger: AGGTTTCAATGATCTTTCAAGTTTAGGATGAGACCAAGTCTCAAGGAGCTGGGATCTTCTTTCTCTTGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTGGGTTCCACTTTGATTaGGAGTTAGCAGAGTCTGAC +
Preference number: 3 (lower is better)
Translates to: MVSHKLQSNSHIISLDALGFHFD*ELAESD
Trigger: GTCAGACTCTGCTAACTCCAAATCAAAGTGGAACCC...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTATGCCAGTAAGAAGTTaGAACTTGACCTGGGGTTGC +
Preference number: 3 (lower is better)
Translates to: MVSHKLQSNSHIISLDALMPVRS*NLTWGC
Trigger: GCAACCCCAGGTCAAGTTCAAACTTCTTACTGGCAT...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTCCTTCCCCCAGATATTaGAAAAATCACTTAACACTC +
Preference number: 3 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFPSPRY*KNHLTL
Trigger: GAGTGTTAAGTGATTTTTCAAATATCTGGGGGAAGG...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 72 bp AGCCTCTCTACAGATGAATCACTTGTCTATGTTAATTaGCCAAAGTTGATGCAGGAGAAAGTAGGAGTGAGT +
Preference number: 3 (lower is better)
Translates to: SLSTDESLVYVN*PKLMQEKVGVS
Trigger: ACTCACTCCTACTTTCTCCTGCATCAACTTTGGTCAATTAACATAGACAAGTGATTCATCTGTAGAGAGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 72 bp CAATCAAACCTTGTTATACTGACCGTTGAAATGCTTTaGGAATACCCAGGGGTTGGCTCCTTGCATTTTATT +
Preference number: 3 (lower is better)
Translates to: QSNLVILTVEML*EYPGVGSLHFI
Trigger: AATAAAATGCAAGGAGCCAACCCCTGGGTATTCTCAAAGCATTTCAACGGTCAGTATAACAAGGTTTGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CCA 72 bp CTAGAATATTTTAAATTGCATATGTGGCTTGGATCATaGTTCCATTGGATGACGCTGGTCTATACTACCTTC +
Preference number: 3 (lower is better)
Translates to: LEYFKLHMWLGS*FHWMTLVYTTF
Trigger: GAAGGTAGTATAGACCAGCGTCATCCAATGGAACCATGATCCAAGCCACATATGCAATTTAAAATATTCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR TCA 72 bp TATTTTAAATCAATCAAACCTTGTTATACTGACCGTTaGAATGCTTTGAGAATACCCAGGGGTTGGCTCCTT +
Preference number: 3 (lower is better)
Translates to: YFKSIKPCYTDR*NALRIPRGWLL
Trigger: AAGGAGCCAACCCCTGGGTATTCTCAAAGCATTTCAACGGTCAGTATAACAAGGTTTGATTGATTTAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR GCA 72 bp TACACATACAGAGAGATCCACATTCAACCCCATTCATaGACATCAGATGTCATATCATATCCAGATATGAAT +
Preference number: 3 (lower is better)
Translates to: YTYREIHIQPHS*TSDVISYPDMN
Trigger: ATTCATATCTGGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTGTATGTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR-3UTR CAA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTTGTTTGCAAATCACTTaGCAATTTCTTTGTCACCCT +
Preference number: 3 (lower is better)
Translates to: MVSHKLQSNSHIISLDALCLQIT*QFLCHP
Trigger: AGGGTGACAAAGAAATTGCAAAGTGATTTGCAAACA...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTCGACCCGGCGGGTGTTaGAGGCCTTGCACCTGTCCC +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSRPGGC*RPCTCP
Trigger: GGGACAGGTGCAAGGCCTTCAACACCCGCCGGGTCG...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTCGTCCGCGGGGCTCATaGCGAACAGCTGCCGGCGAT +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSRPRGS*RTAAGD
Trigger: ATCGCCGGCAGCTGTTCGCCATGAGCCCCGCGGACG...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTGGGGGCTCAGGGCCCTaGACTCTTGCTGCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSGGSGP*TLAARN
Trigger: GTTCCTGGCAGCAAGAGTGCAGGGCCCTGAGCCCCC...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTCCACCGCCATGCCCATaGAGCCAGCCGTCATTCTGC +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSPPPCP*SQPSFC
Trigger: GCAGAATGACGGCTGGCTTCATGGGCATGGCGGTGG...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTTGGCCACGGCCAGCATaGCGAGGGCGCAGAGCGCTA +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSWPRPA*RGRRAL
Trigger: TAGCGCTCTGCGCCCTCGGCATGCTGGCCGTGGCCA...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTTCCAGCCAAAGAGGATaGTGGCCACCGCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSSSQRG*WPPPCP
Trigger: TGGGCATGGCGGTGGCCATCATCCTCTTTGGCTGGA...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCGGGCCCGGAGGAGTTTaGCCTCCCAGCGGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVGPGGV*PPSGPG
Trigger: GCCTGGACCGCTGGGAGGGCAAACTCCTCCGGGCCC...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTAGTTGTACTGCCGGCTaGACTCGTCCGCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSSCTAG*TRPRGS
Trigger: TGAGCCCCGCGGACGAGTGCAGCCGGCAGTACAACT...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTTCCAGAGGCCCATGTTaGTGGAGTTGTACTGCCGGC +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSSRGPC*WSCTAG
Trigger: GCCGGCAGTACAACTCCACCAACATGGGCCTCTGGA...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTAGTGGTCCGAGCAGATaGCCACGGCCAGCATGCCGA +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSSGPSR*PRPACR
Trigger: TCGGCATGCTGGCCGTGGCCATCTGCTCGGACCACT...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTTCAGGGATTCTCACCTaGCCTCCCCAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSSGILT*PPQGCW
Trigger: CCAGCAGCCCTGGGGAGGCCAGGTGAGAATCCCTGA...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTACCTTTTGCAGAAGCTaGCCAGAGTCCCCGGTAAGG +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSTFCRS*PESPVR
Trigger: CCTTACCGGGGACTCTGGTCAGCTTCTGCAAAAGGT...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCCAGGACTTGCCGTCTaGAAGGGGCCTCTATCCTGG +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSPGLAV*KGPLSW
Trigger: CCAGGATAGAGGCCCCTTTCAGACGGCAAGTCCTGG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCCGTCCGCGGGGCTCATaGCGAACAGCTGCCGGCGAT +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVRPRGS*RTAAGD
Trigger: ATCGCCGGCAGCTGTTCGCCATGAGCCCCGCGGACG...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTCCCATGCACAGAACATaGACCAGCCATAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSPMHRT*TSHSHG
Trigger: GCCATGGCTATGGCTGGTCCATGTTCTGTGCATGGG...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTCTCCCGTTGACCCAGTaGGTGGCACTTCCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSLPLTQ*VALPSL
Trigger: TAGAGAAGGAAGTGCCACCCACTGGGTCAACGGGAG...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCCCTCCCCAGGGCTGCTaGGCACCAGCAGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVPPQGC*APAGSL
Trigger: CAGTGAGCCTGCTGGTGCCCAGCAGCCCTGGGGAGG...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTTTTCTCCTTTCCGAATaGGGGCGGCGATCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSFLLSE*GRRSRG
Trigger: ACCCCGAGATCGCCGCCCTCATTCGGAAAGGAGAAA...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCGGCGTCCTCTCCCGTTaGCCCAGTGGGTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVGVLSR*PSGWHF
Trigger: GAAGTGCCACCCACTGGGTCAACGGGAGAGGACGCC...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTAACCTACAGCCACAATaGACAAGGAAGGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSNLQPQ*TRKGAA
Trigger: AGCAGCCCCCTTCCTTGTTCATTGTGGCTGTAGGTT...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTAGAACTTCCAGAGGCTaGGACAGCAGCCTCGACATA +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSRTSRG*DSSLDI
Trigger: TATGTCGAGGCTGCTGTCTCAGCCTCTGGAAGTTCT...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCCATTGGCCAGGACTTaGCGTCTGAAAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSPLART*RLKGAS
Trigger: AGAGGCCCCTTTCAGACGGCAAGTCCTGGCCAATGG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTGCCCTGCACTCTTGCTaGCAGGAACACAGGGTCAAC +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSALHSC*QEHRVN
Trigger: GTTGACCCTGTGTTCCTGGCAGCAAGAGTGCAGGGC...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTGGACACTTGATCCGCTaGAAAGCAGAAAGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSGHLIR*KAESVR
Trigger: CCGCACACTTTCTGCTTTGCAGCGGATCAAGTGTCC...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTGTGTTGCTGGTGGGCTaGGAAGGAAGTCCGAACAGG +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSVLLVG*EGSPNR
Trigger: CCTGTTCGGACTTCCTTCCCAGCCCACCAGCAACAC...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTACCACGGGGGTCCTCTaGCCCAGTGGCTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSTTGVL*PSGFVL
Trigger: AAGAACAAAGCCACTGGGCCAGAGGACCCCCGTGGT...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCCCAGAGCTGTAATGTaGAGAACCACGGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSPRAVM*RTTGVL
Trigger: GAGGACCCCCGTGGTTCTCCACATTACAGCTCTGGG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGCCTCCCCAGGGCTGCTaGGCACCAGCAGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGPPQGC*APAGSL
Trigger: CAGTGAGCCTGCTGGTGCCCAGCAGCCCTGGGGAGG...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTACAACACAGACGCACTaGTACAGACGGAGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSTTQTH*YRRRGS
Trigger: AGACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGT...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTAGGTGCACAGTGAAATaGTGCAGAAGGTTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSRCTVK*CRRFLP
Trigger: TGGGAGGAACCTTCTGCATCATTTCACTGTGCACCT...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTTCTGGGCTGGTGAGTTaGGCCCAGGTTGTTTACGTC +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSSGLVS*AQVVYV
Trigger: GACGTAAACAACCTGGGCTCAACTCACCAGCCCAGA...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTGATGATATTAGCAGGTaGCTGGCCCAGGTGACGAAA +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSDDISR*LAQVTK
Trigger: TTTCGTCACCTGGGCCAGTCACCTGCTAATATCATC...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCATGGAAGGCAACCCTaGTGGTGTGCACCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSHGRQP*WCAPAL
Trigger: AAGAGCTGGTGCACACCAGCAGGGTTGCCTTCCATG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTACTTTTAGGCCTCTTTaGTATCTCTGGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSTFRPL*YLWGLR
Trigger: CCTGAGCCCCCAGAGATAGCAAAGAGGCCTAAAAGT...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCCCATGCACAGAACATaGACCAGCCATAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSPMHRT*TSHSHG
Trigger: GCCATGGCTATGGCTGGTCCATGTTCTGTGCATGGG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTCCCGAGACACTGGGGTaGATTTATTCCACCTCTGTT +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSPETLG*IYSTSV
Trigger: AACAGAGGTGGAATAAATCCACCCCAGTGTCTCGGG...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTAACATCGTATTTCCCTaGAAAGGGCTGGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSNIVFP*KGLAVS
Trigger: GGACACAGCCAGCCCTTTCCAGGGAAATACGATGTT...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTGATGACCTTGCACTCTaGGTTATCCTTCAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSDDLAL*VILQQR
Trigger: TCGCTGCTGAAGGATAACCCAGAGTGCAAGGTCATC...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGCTACACCATGGGCATaGTCCGCCGCAGCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAATPWA*SAAASP
Trigger: AGGCGAGGCTGCGGCGGATCATGCCCATGGTGTAGC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTGGTTGGGTTCCACTTTaGTTTGGAGTTAGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSGWVPL*FGVSRV
Trigger: GACTCTGCTAACTCCAAATCAAAGTGGAACCCAACC...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTGAGAGGGTCTATGGGTaGCCCGGAAAGGAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSERVYG*PGKERK
Trigger: TTTCCTTTCCTTTCCGGGTCACCCATAGACCCTCTC...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTACCTTCCGGCAGCCATaGCTCCGCTTGGCGGCTACA +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGTFRQP*LRLAAT
Trigger: TGTAGCCGCCAAGCGGAGGCATGGCTGCCGGAAGGT...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTTCCCCCGTTACCAGCTaGGCTCTATCTACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSSPVTS*ALSTER
Trigger: TCTCTCTGTAGATAGAGCCCAGCTGGTAACGGGGGA...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGCGTGCCTCCCCTCTCTaGGGCAGCTGGTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGRASPL*GSWSSQ
Trigger: CTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACG...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCCATGGGTTGGGTCACTaGCCAAGCTCGACGTGCCTC +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVHGLGH*PSSTCL
Trigger: GAGGCACGTCGAGCTTGGCCAGTGACCCAACCCATG...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTAGCGCCGACACCCTCTaGGGGCAGATGGGACATGCA +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGSADTL*GQMGHA
Trigger: TGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCT...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGCTACACCATGGGCATaGTCCGCCGCAGCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGATPWA*SAAASP
Trigger: AGGCGAGGCTGCGGCGGATCATGCCCATGGTGTAGC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTTGCTCTCTCTGCATGTaGCCCACTTCCTTTCGTTTG +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSCSLCM*PTSFRL
Trigger: CAAACGAAAGGAAGTGGGTCACATGCAGAGAGAGCA...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTCCAGGACTTGCCGTCTaGAAGGGGCCTCTATCCTGG +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGPGLAV*KGPLSW
Trigger: CCAGGATAGAGGCCCCTTTCAGACGGCAAGTCCTGG...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCGGGATCAAGGTCACCTaGGAAGTCCTCCCATTGGCC +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVGIKVT*EVLPLA
Trigger: GGCCAATGGGAGGACTTCTCAGGTGACCTTGATCCC...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGAGCTATGGCAGTGAGTaGCCCACCAGGAAGGACCCC +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGSYGSE*PTRKDP
Trigger: GGGGTCCTTCCTGGTGGGTCACTCACTGCCATAGCT...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTACACCACTCCTTGTCTaGCCAATCAGAAAGCACTAT +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSTPLLV*PIRKHY
Trigger: ATAGTGCTTTCTGATTGGTCAGACAAGGAGTGGTGT...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCACCTTCCGGCAGCCATaGCTCCGCTTGGCGGCTACA +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQATFRQP*LRLAAT
Trigger: TGTAGCCGCCAAGCGGAGGCATGGCTGCCGGAAGGT...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTAGCCCTGCCACGTACTaGATAAGGCCTCGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGSPATY*IRPRSQ
Trigger: CTGGGACCGAGGCCTTATGCAGTACGTGGCAGGGCT...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCTCCAGAGGCCCATGTTaGTGGAGTTGTACTGCCGGC +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVSRGPC*WSCTAG
Trigger: GCCGGCAGTACAACTCCACCAACATGGGCCTCTGGA...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCGTGTTGCTGGTGGGCTaGGAAGGAAGTCCGAACAGG +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVVLLVG*EGSPNR
Trigger: CCTGTTCGGACTTCCTTCCCAGCCCACCAGCAACAC...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTATGAGCCCGAGACACTaGGGTGGATTTATTCCACCT +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSMSPRH*GGFIPP
Trigger: AGGTGGAATAAATCCACCCCAGTGTCTCGGGCTCAT...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCAGCGCCGACACCCTCTaGGGGCAGATGGGACATGCA +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQASADTL*GQMGHA
Trigger: TGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCT...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGCATAAGGGACATGACTaGGGCAGCGCCGACACCCTC +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGHKGHD*GSADTL
Trigger: GAGGGTGTCGGCGCTGCCCCAGTCATGTCCCTTATG...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTCATAAGGGACATGACTaGGGCAGCGCCGACACCCTC +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGHKGHD*GSADTL
Trigger: GAGGGTGTCGGCGCTGCCCCAGTCATGTCCCTTATG...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTCCCCATCCTCGCCAGTaGTGGGGATCAAGACGCGGT +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGPHPRQ*WGSRRG
Trigger: ACCGCGTCTTGATCCCCATCACTGGCGAGGATGGGG...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTAGGGGAGATGTCCAGTaGCAAAGGACAGCTTCTATA +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSRGDVQ*QRTASI
Trigger: TATAGAAGCTGTCCTTTGTCACTGGACATCTCCCCT...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCCCCCAGGCTCAAGGTTaGCTTGCATGGAGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVPQAQG*LAWSSK
Trigger: CTTTGAGCTCCATGCAAGTCAACCTTGAGCCTGGGG...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTTCATTGGGGAAGTTTTaGGGTCATGACCATTTGGAT +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSSLGKF*GHDHLD
Trigger: ATCCAAATGGTCATGACCTCAAAACTTCCCCAATGA...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTACTGGCTTCAGCAACTaGCAAGAGAAAGAAGATCCC +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSTGFSN*QEKEDP
Trigger: GGGATCTTCTTTCTCTTGTCAGTTGCTGAAGCCAGT...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTCTCAAGGTCACTTTCTaGGGGGCGAAAGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGLKVTF*GAKAEA
Trigger: GGCCTCTGCTTTCGCCCCTCAGAAAGTGACCTTGAG...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCCTCATGGCGAACAGCTaGCGGCGATTCCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLILMANS*RRFRAR
Trigger: CCGGGCCCGGAATCGCCGGCAGCTGTTCGCCATGAG...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCTGGCCACGGCCAGCATaGCGAGGGCGCAGAGCGCTA +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIWPRPA*RGRRAL
Trigger: TAGCGCTCTGCGCCCTCGGCATGCTGGCCGTGGCCA...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCAGCCAGCCGTCATTCTaGGCAGGTGTAGGGCATGCC +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQASQPSF*AGVGHA
Trigger: GGCATGCCCTACACCTGCGCAGAATGACGGCTGGCT...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565468.6
CDS-3UTR GCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCGCAACCCTGCTGGTGTaGACCAGCTCTTCCTATCTG +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVATLLV*TSSSYL
Trigger: CAGATAGGAAGAGCTGGTGCACACCAGCAGGGTTGC...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACGGGGGCTCAGGGCCCTaGACTCTTGCTGCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHGGSGP*TLAARN
Trigger: GTTCCTGGCAGCAAGAGTGCAGGGCCCTGAGCCCCC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCAATACACAAGGGGACTaGGCACCCCCAGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQANTQGD*APPEPW
Trigger: CCAGGGCTCTGGGGGTGCGCAGTCCCCTTGTGTATT...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGCCAACCCACATCTTCTaGCTACTGCCTCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGPTHIF*LLPPRH
Trigger: GTGGCGTGGAGGCAGTAGGCAGAAGATGTGGGTTGG...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTTGGTCTTCTCAGTCCTaGAGGGAGACAGCTGTTTAT +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSWSSQS*RETAVY
Trigger: ATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACCA...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTAGAGGCCCATGTTGGTaGAGTTGTACTGCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGRGPCW*SCTAGC
Trigger: GCAGCCGGCAGTACAACTCCACCAACATGGGCCTCT...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCGCTCCCGCGGGCTCCTaGGCATCCTCTGAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIAPAGS*ASSEAG
Trigger: ACCTGCCTCAGAGGATGCCCAGGAGCCCGCGGGAGC...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565468.6
CDS-3UTR CCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTGGAAGAGCCACAGGATaGAAAAACTTTCCCCATCTC +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSGRATG*KNFPHL
Trigger: GAGATGGGGAAAGTTTTTCCATCCTGTGGCTCTTCC...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCCTCCCGTTGACCCAGTaGGTGGCACTTCCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVLPLTQ*VALPSL
Trigger: TAGAGAAGGAAGTGCCACCCACTGGGTCAACGGGAG...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGCCCAGAGCTGTAATGTaGAGAACCACGGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGPRAVM*RTTGVL
Trigger: GAGGACCCCCGTGGTTCTCCACATTACAGCTCTGGG...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGTCAAAGCCCCTGCTCTaGGCTGGTGAGTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGSKPLL*AGELSP
Trigger: TGGGCTCAACTCACCAGCCCAGAGCAGGGGCTTTGA...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTCATTCTAAATGCCTCTaGGTGATGTACCTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSHSKCL*VMYLSS
Trigger: TGAACTCAGGTACATCACCCAGAGGCATTTAGAATG...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCAGCTGGAAGATGGCATaGAAGGCAACCCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVSWKMA*KATLLV
Trigger: CACCAGCAGGGTTGCCTTCCATGCCATCTTCCAGCT...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCCATGACCATTTGGATTaGGCCCGCGGTAGATGCCTC +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVHDHLD*ARGRCL
Trigger: GAGGCATCTACCGCGGGCCCAATCCAAATGGTCATG...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 72 bp CAAGGTCACCTGAGAAGTCCTCCCATTGGCCAGGACTaGCCGTCTGAAAGGGGCCTCTATCCTGGTCATGTG +
Preference number: 4 (lower is better)
Translates to: QGHLRSPPIGQD*PSERGLYPGHV
Trigger: CACATGACCAGGATAGAGGCCCCTTTCAGACGGCAAGTCCTGGCCAATGGGAGGACTTCTCAGGTGACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGTGACAGCTCAAAGTTaGTCCCGGCCACACAGGTGC +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAVTAQS*SRPHRC
Trigger: GCACCTGTGTGGCCGGGATCAACTTTGAGCTGTCAC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTAGCCATAGCCATGGCTaGTGTCATCAGGGAGTCCGT +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGSHSHG*CHQGVR
Trigger: ACGGACTCCCTGATGACATCAGCCATGGCTATGGCT...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGGTCCTCGGGACAGGTTaGACAGAAGGGGCTAAGGTA +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGVLGTG*TEGAKV
Trigger: TACCTTAGCCCCTTCTGTTCAACCTGTCCCGAGGAC...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTTGGGATTCATGGCCTTaGATATCAAGAGGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSWDSWP*ISRGKG
Trigger: TCCTTTCCCTCTTGATATTCAAGGCCATGAATCCCA...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCTCACAACTCTCTGGCTaGCTTTGCTTGCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVSQLSG*LCLPAP
Trigger: AGGTGCTGGCAAGCAAAGTCAGCCAGAGAGTTGTGA...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTTGGAAGACGTGTAAATaGAACAGATTACACAGCAGT +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSWKTCK*NRLHSS
Trigger: ACTGCTGTGTAATCTGTTTCATTTACACGTCTTCCA...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTTCTGGGCTGGTGAGTTaGGCCCAGGTTGTTTACGTC +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGSGLVS*AQVVYV
Trigger: GACGTAAACAACCTGGGCTCAACTCACCAGCCCAGA...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGGGATCAAGGTCACCTaGGAAGTCCTCCCATTGGCC +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAGIKVT*EVLPLA
Trigger: GGCCAATGGGAGGACTTCTCAGGTGACCTTGATCCC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGGGCTTGGAGGAGGATTaGAGCTGGAACAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGGLEED*SWNRHR
Trigger: TCTGTGCCTGTTCCAGCTTCAATCCTCCTCCAAGCC...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGCAAGAGCTATGGCAGTaGGTGACCCACCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGQELWQ*VTHQEG
Trigger: TCCTTCCTGGTGGGTCACTCACTGCCATAGCTCTTG...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTTTGCACCTGTCCCTGTaGTTCCTGGCGTCCGTCTCG +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGLHLSL*FLASVS
Trigger: CGAGACGGACGCCAGGAAGCACAGGGACAGGTGCAA...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACAGTTGTACTGCCGGCTaGACTCGTCCGCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHSCTAG*TRPRGS
Trigger: TGAGCCCCGCGGACGAGTGCAGCCGGCAGTACAACT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCCCTTCTCTACATCTGTaGTGCCTCAGACCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVPSLHL*CLRPLP
Trigger: TGGAAGGGGTCTGAGGCAGCACAGATGTAGAGAAGG...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTGACAGCTACACACAGTaGATTCATTTCCGGCATCTT +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSDSYTQ*IHFRHL
Trigger: AAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTC...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCTCACATGGCCCCAGCTaGCAACCCAGAGACAAGCAC +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQASHGPS*QPRDKH
Trigger: GTGCTTGTCTCTGGGTTGGCAGCTGGGGCCATGTGA...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCCTAATTTACCTCCATaGAGTAAGCACGCACTAGCA +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSPNLPP*SKHALA
Trigger: TGCTAGTGCGTGCTTACTGCATGGAGGTAAATTAGG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGCCTACCCCAGCCCAGTaGAGCAAAGCTCAGTCAGTA +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGPTPAQ*SKAQSV
Trigger: TACTGACTGAGCTTTGCTGCACTGGGCTGGGGTAGG...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCCCTCCACGCCACCACTaGCTCCACCATCTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAPPRHH*LHHLQS
Trigger: AGACTGAAGATGGTGGAGGCAGTGGTGGCGTGGAGG...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCTGGCCAAGCTCGACGTaGCTCCCCTCTCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIWPSST*LPSLGQ
Trigger: CTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCA...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCAACCACAGGAATTGCTaGCTCCAAGGGCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVNHRNC*LQGQRH
Trigger: ATGCCTCTGCCCTTGGAGGCAGCAATTCCTGTGGTT...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACAGTGGTCCGAGCAGATaGCCACGGCCAGCATGCCGA +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHSGPSR*PRPACR
Trigger: TCGGCATGCTGGCCGTGGCCATCTGCTCGGACCACT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCCGCGGTCGCAAGTGGTaGTGTTTGCTCTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVRGRKW*CLLCLQ
Trigger: TTGAAGACAGAGCAAACACCACCACTTGCGACCGCG...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTTCCTGGTCATGTGGCTaGGCGTCTTTTGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGSWSCG*ASFASQ
Trigger: CTGGGAAGCAAAAGACGCCCAGCCACATGACCAGGA...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTGAAAGCTTCCGTAACTaGTTGGAGTCACATGTTTTA +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSESFRN*LESHVL
Trigger: TAAAACATGTGACTCCAACCAGTTACGGAAGCTTTC...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGGAAGGCAACCCTGCTaGTGTGCACCAGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAGRQPC*CAPALP
Trigger: AGGAAGAGCTGGTGCACACCAGCAGGGTTGCCTTCC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGAGCTGGAAGATGGCATaGAAGGCAACCCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGSWKMA*KATLLV
Trigger: CACCAGCAGGGTTGCCTTCCATGCCATCTTCCAGCT...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGACACCAGCTGGAAGATaGCATGGAAGGCAACCCTGC +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGTPAGR*HGRQPC
Trigger: GCAGGGTTGCCTTCCATGCCATCTTCCAGCTGGTGT...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTGAGACAAGCACTCATTaGGGAAGTTTTGAGGTCATG +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSETSTH*GSFEVM
Trigger: CATGACCTCAAAACTTCCCCAATGAGTGCTTGTCTC...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 72 bp AGGGGCCTCTATCCTGGTCATGTGGCTGGGCGTCTTTaGCTTCCCAGCAGGATCAGATCCCAAAGTGTGTTC +
Preference number: 4 (lower is better)
Translates to: RGLYPGHVAGRL*LPSRIRSQSVF
Trigger: GAACACACTTTGGGATCTGATCCTGCTGGGAAGCAAAAGACGCCCAGCCACATGACCAGGATAGAGGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 72 bp CGACAGGTCCAGCCCTGTTCAGCAACAAAGATGACCTaGCACTCTGGGTTATCCTTCAGCAGCGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: RQVQPCSATKMT*HSGLSFSSEAQ
Trigger: CTGTGCCTCGCTGCTGAAGGATAACCCAGAGTGCAAGGTCATCTTTGTTGCTGAACAGGGCTGGACCTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 72 bp AGGAAAGTTGGGATTGAAGGTGCCTCTAATCATGGGTaGGGTCACTGGCCAAGCTCGACGTGCCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: RKVGIEGASNHG*GHWPSSTCLPS
Trigger: AGAGGGGAGGCACGTCGAGCTTGGCCAGTGACCCAACCCATGATTAGAGGCACCTTCAATCCCAACTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGTGTTATTGTTGTAAATaGAGCCGGGGTCGACCCGGC +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGCYCCK*SRGRPG
Trigger: GCCGGGTCGACCCCGGCTTCATTTACAACAATAACA...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCCCTGGGGATGGTTGCTaGGGAGTAGTGGTATTTGAT +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVPGDGC*GVVVFD
Trigger: ATCAAATACCACTACTCCTCAGCAACCATCCCCAGG...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGTAGCGTGGGTAGCGTaGCAGCTCAAAGTTGATCCC +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAVAWVA*QLKVDP
Trigger: GGGATCAACTTTGAGCTGTCACGCTACCCACGCTAC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGGCTAATTTGCTCAAATaGGCCCGAGACACTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGANLLK*ARDTGV
Trigger: CACCCCAGTGTCTCGGGCTCATTTGAGCAAATTAGC...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTTCACAACTCTCTGGCTaGCTTTGCTTGCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGSQLSG*LCLPAP
Trigger: AGGTGCTGGCAAGCAAAGTCAGCCAGAGAGTTGTGA...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGAACCTACAGCCACAATaGACAAGGAAGGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGNLQPQ*TRKGAA
Trigger: AGCAGCCCCCTTCCTTGTTCATTGTGGCTGTAGGTT...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGTCAGGGTTACTGCTTTaGGGATCCTTCTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGSGLLL*GSFSAA
Trigger: GGCAGCAGAGAAGGATCCTCAAAGCAGTAACCCTGA...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGGGTGACTGGCCCAGGTaGCGAAATGTTGTAGAGATC +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGGDWPR*RNVVEI
Trigger: GATCTCTACAACATTTCGTCACCTGGGCCAGTCACC...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTGGTGACTGGCCCAGGTaGCGAAATGTTGTAGAGATC +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGGDWPR*RNVVEI
Trigger: GATCTCTACAACATTTCGTCACCTGGGCCAGTCACC...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTGGGCCCGGAGGAGTTTaGCCTCCCAGCGGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFGPGGV*PPSGPG
Trigger: GCCTGGACCGCTGGGAGGGCAAACTCCTCCGGGCCC...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTCCGGCGAGATGCAGGTaGCTGAGCCAACTCAACTCT +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGPARCR*LSQLNS
Trigger: AGAGTTGAGTTGGCTCAGGCACCTGCATCTCGCCGG...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGCCTTCTCTACATCTGTaGTGCCTCAGACCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGPSLHL*CLRPLP
Trigger: TGGAAGGGGTCTGAGGCAGCACAGATGTAGAGAAGG...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGAGAAAGGCTGCTGAGTaGCTGGCAAAGCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGRKAAE*LAKLPK
Trigger: CTTTGGGAGCTTTGCCAGGCACTCAGCAGCCTTTCT...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTGCACCCACACCTGTGTaGAGGTGTGTACTGACACAA +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGAPTPV*RCVLTQ
Trigger: TTGTGTCAGTACACACCTGCACACAGGTGTGGGTGC...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGTGGCTGGGCGTCTTTTaGTTCCCAGCAGGATCAGAT +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGWLGVF*FPAGSD
Trigger: ATCTGATCCTGCTGGGAAGCAAAAGACGCCCAGCCA...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCCATGGAAGGCAACCCTaGTGGTGTGCACCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAHGRQP*WCAPAL
Trigger: AAGAGCTGGTGCACACCAGCAGGGTTGCCTTCCATG...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTACATCTTCTGCCTACTaGCTCCACGCCACCACTGCC +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGTSSAY*LHATTA
Trigger: GGCAGTGGTGGCGTGGAGGCAGTAGGCAGAAGATGT...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGAACCACAGGAATTGCTaGCTCCAAGGGCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGNHRNC*LQGQRH
Trigger: ATGCCTCTGCCCTTGGAGGCAGCAATTCCTGTGGTT...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTTGTCCCTGTGCTTCCTaGCGTCCGTCTCGTACCAGT +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGCPCAS*RPSRTS
Trigger: ACTGGTACGAGACGGACGCCAGGAAGCACAGGGACA...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGCGCGGTCGCAAGTGGTaGTGTTTGCTCTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGRGRKW*CLLCLQ
Trigger: TTGAAGACAGAGCAAACACCACCACTTGCGACCGCG...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCATGAGCCCGAGACACTaGGGTGGATTTATTCCACCT +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVMSPRH*GGFIPP
Trigger: AGGTGGAATAAATCCACCCCAGTGTCTCGGGCTCAT...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGAGGCTGCTGAGTGCCTaGCAAAGCTCCCAAAGCATA +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGRLLSA*QSSQSI
Trigger: TATGCTTTGGGAGCTTTGCCAGGCACTCAGCAGCCT...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCCATGACCATTTGGATTaGGCCCGCGGTAGATGCCTC +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAHDHLD*ARGRCL
Trigger: GAGGCATCTACCGCGGGCCCAATCCAAATGGTCATG...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGGAGGTCATGACCATTTaGATTGGGCCCGCGGTAGAT +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGEVMTI*IGPAVD
Trigger: ATCTACCGCGGGCCCAATCCAAATGGTCATGACCTC...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTATGAGTGAGTTACTCTaGCTTCCGCATTCTTACATC +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSMSELL*LPHSYI
Trigger: GATGTAAGAATGCGGAAGCCAGAGTAACTCACTCAT...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTGAAAAGCTCAGCCAGTaGGAGGAATGGGGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGEKLSQ*EEWGSG
Trigger: TCCAGAACCCCATTCCTCCCACTGGCTGAGCTTTTC...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGTTTGGTAGCAACCCTTaGCCAGACTCCCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGFGSNP*PDSLLL
Trigger: CAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAA...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGCCTCTAATCATGGGTTaGGTCACTGGCCAAGCTCGA +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGPLIMG*VTGQAR
Trigger: TCGAGCTTGGCCAGTGACCCAACCCATGATTAGAGG...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTAGAGGTAGGCAATGGTaGGTTGAGTCCCAGTCCAAG +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGRGRQW*VESQSK
Trigger: CTTGGACTGGGACTCAACCCACCATTGCCTACCTCT...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTAAGAGAGGTAGGCAATaGTGGGTTGAGTCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGKRGRQ*WVESQS
Trigger: GGACTGGGACTCAACCCACCATTGCCTACCTCTCTT...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCCGACCCGGCGGGTGTTaGAGGCCTTGCACCTGTCCC +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISRPGGC*RPCTCP
Trigger: GGGACAGGTGCAAGGCCTTCAACACCCGCCGGGTCG...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCTGTTATTGTTGTAAATaGAGCCGGGGTCGACCCGGC +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQACYCCK*SRGRPG
Trigger: GCCGGGTCGACCCCGGCTTCATTTACAACAATAACA...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGCATGCCACTCATCCTaGCGGATGGTCTTCGTGATA +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAACHSS*RMVFVI
Trigger: TATCACGAAGACCATCCGTCAGGATGAGTGGCATGC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565468.6
CDS-3UTR TCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGGGCTTTGTTACCCTGTaGTATGACTGGTTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGGFVTL*YDWLGV
Trigger: CACCCCTAACCAGTCATATCACAGGGTAACAAAGCC...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGTGCTCTCTCTGCATGTaGCCCACTTCCTTTCGTTTG +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGCSLCM*PTSFRL
Trigger: CAAACGAAAGGAAGTGGGTCACATGCAGAGAGAGCA...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCCACCAGCAGGCTCACTaGGATGACTGTGAGCGGCTC +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIHQQAH*DDCERL
Trigger: GAGCCGCTCACAGTCATCTCAGTGAGCCTGCTGGTG...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACCCGGTAAGGAAGTCTTaGGTAGGGCACCCACACCTG +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHPVRKS*VGHPHL
Trigger: CAGGTGTGGGTGCCCTACTCAAGACTTCCTTACCGG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTCCAAATGGATGCTTGTaGACCTGTCTGTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGPNGCL*TCLSLP
Trigger: AGGAAGGGACAGACAGGTTCACAAGCATCCATTTGG...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGGCTTGGAGGAGGATTaGAGCTGGAACAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGGLEED*SWNRHR
Trigger: TCTGTGCCTGTTCCAGCTTCAATCCTCCTCCAAGCC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTGTCTCTGTGACTCCATaGTCCCTGAAGTTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGVSVTP*SLKLKG
Trigger: CCCTTTCAACTTCAGGGATCATGGAGTCACAGAGAC...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTTATCATGAGTGTGGATaGATATTGAGATATAGGGCC +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSYHECG*ILRYRA
Trigger: GGCCCTATATCTCAATATTCATCCACACTCATGATA...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACCTCAAGGTCACTTTCTaGGGGGCGAAAGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHLKVTF*GAKAEA
Trigger: GGCCTCTGCTTTCGCCCCTCAGAAAGTGACCTTGAG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCTCAGGGTTACTGCTTTaGGGATCCTTCTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQASGLLL*GSFSAA
Trigger: GGCAGCAGAGAAGGATCCTCAAAGCAGTAACCCTGA...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGCTCTTACTAAGCAGGTaGAGCAGAACTTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGLLLSR*SRTSRG
Trigger: GCCTCTGGAAGTTCTGCTTCACCTGCTTAGTAAGAG...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCAAACCTTGTTATACTaGCCGTTGAAATGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSQTLLY*PLKCFE
Trigger: CTCAAAGCATTTCAACGGTCAGTATAACAAGGTTTG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCTTGGTGGAGTTGTACTaGCGGCTGCACTCGTCCGCG +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLILVELY*RLHSSA
Trigger: CGCGGACGAGTGCAGCCGGCAGTACAACTCCACCAA...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGGCTGAGGTTGGTGTTTaGCAAAGAGATGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGAEVGV*QRDASF
Trigger: GAAGCTGGCATCTCTTTGGCAAACACCAACCTCAGC...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACCCAACCCACATCTTCTaGCTACTGCCTCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHPTHIF*LLPPRH
Trigger: GTGGCGTGGAGGCAGTAGGCAGAAGATGTGGGTTGG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCCTCTGGGCCTCTATCTaGGGCCATGAAACCACTACA +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQALWASI*GHETTT
Trigger: TGTAGTGGTTTCATGGCCCCAGATAGAGGCCCAGAG...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTCAATTTCTAGGTCTCTaGGCCTCTATCTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGQFLGL*ASIWGH
Trigger: ATGGCCCCAGATAGAGGCCCAGAGACCTAGAAATTG...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTTCTATCCTGGTCATGTaGCTGGGCGTCTTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGSILVM*LGVFCF
Trigger: GAAGCAAAAGACGCCCAGCCACATGACCAGGATAGA...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTATGCCTCAGAGTGACTaGATTATGAAAAATCTTGTA +
Preference number: 4 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSMPQSD*IMKNLV
Trigger: TACAAGATTTTTCATAATCCAGTCACTCTGAGGCAT...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTGATGACCTTGCACTCTaGGTTATCCTTCAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGDDLAL*VILQQR
Trigger: TCGCTGCTGAAGGATAACCCAGAGTGCAAGGTCATC...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGAGTGTGCGGACCCTTTaGGAAGGGCGTTCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGSVRTL*EGRSFL
Trigger: AAGAAAAGAACGCCCTTCCCAAAGGGTCCGCACACT...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCTTGCTGAGGATTTTCTaGTGCTTCTGCCATCTGTCC +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVLLRIF*CFCHLS
Trigger: GGACAGATGGCAGAAGCACCAGAAAATCCTCAGCAA...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCTTGGCCTCTAGGACTTaGACAGGTCATAAGGGACAT +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVLASRT*TGHKGH
Trigger: ATGTCCCTTATGACCTGTCCAAGTCCTAGAGGCCAA...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCGAATATGACCTGCTTTaGCCTCTAGGACTTGGACAG +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVEYDLL*PLGLGQ
Trigger: CTGTCCAAGTCCTAGAGGCCAAAGCAGGTCATATTC...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCAAGAGAGGTAGGCAATaGTGGGTTGAGTCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAKRGRQ*WVESQS
Trigger: GGACTGGGACTCAACCCACCATTGCCTACCTCTCTT...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 72 bp CCCACCCCTACAGCGTTCACAACTCTCTGGCTGACTTaGCTTGCCAGCACCTGCAGTGCTAATTTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: PTPTAFTTLWLT*LASTCSANLLK
Trigger: TTTGAGCAAATTAGCACTGCAGGTGCTGGCAAGCAAAGTCAGCCAGAGAGTTGTGAACGCTGTAGGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 72 bp CTTCCCTTGAAGGAAGTCTCACCCTCACAAGGACACTaGATCCGCTGCAAAGCAGAAAGTGTGCGGACCCTT +
Preference number: 4 (lower is better)
Translates to: LPLKEVSPSQGH*IRCKAESVRTL
Trigger: AAGGGTCCGCACACTTTCTGCTTTGCAGCGGATCAAGTGTCCTTGTGAGGGTGAGACTTCCTTCAAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 72 bp ATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATaGAAGGTGCCTCTAATCATGGGTTGGGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: ITVTQQRRGKLG*KVPLIMGWVTG
Trigger: GCCAGTGACCCAACCCATGATTAGAGGCACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCCACACAGGTGCACAGTaGAATGATGCAGAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAHTGAQ*NDAEGS
Trigger: GGAACCTTCTGCATCATTTCACTGTGCACCTGTGTG...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACCGAGATGCAGGTGCCTaGGCCAACTCAACTCTACCT +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHRDAGA*ANSTLP
Trigger: AGGTAGAGTTGAGTTGGCTCAGGCACCTGCATCTCG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTGGTTGGGTTCCACTTTaGTTTGGAGTTAGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGGWVPL*FGVSRV
Trigger: GACTCTGCTAACTCCAAATCAAAGTGGAACCCAACC...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCAGTGTGGATGAATATTaGGATATAGGGCCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVSVDEY*DIGPSL
Trigger: GAGACTGGGCCCTATATCTCAATATTCATCCACACT...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCCCTTCAAACATTGCTaGTTTACTTTTATTTTGGGG +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSPFKHC*FTFILG
Trigger: CCCCAAAATAAAAGTAAATCAGCAATGTTTGAAGGG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGCATGGTTCCATTGGATaGCGCTGGTCTATACTACCT +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGHGSIG*RWSILP
Trigger: AGGTAGTATAGACCAGCGTCATCCAATGGAACCATG...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACCAAGAGCTATGGCAGTaGGTGACCCACCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHQELWQ*VTHQEG
Trigger: TCCTTCCTGGTGGGTCACTCACTGCCATAGCTCTTG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGGCAAGTGGTGGTGTTTaGTCTGTCTTCAAGAGACCA +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGASGGV*SVFKRP
Trigger: TGGTCTCTTGAAGACAGAGCAAACACCACCACTTGC...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTCCAGGGATCTGTAGCTaGAGAATTGGCACCCTTATA +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGPGICS*RIGTLI
Trigger: TATAAGGGTGCCAATTCTGCAGCTACAGATCCCTGG...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGCCTGCAGTGCTAATTTaGTCAAATGAGCCCGAGACA +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGPAVLI*SNEPET
Trigger: TGTCTCGGGCTCATTTGAGCAAATTAGCACTGCAGG...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGAACAACTTTTCCCGTTaGACACCTTACCCTATCGCC +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGNNFSR*TPYPIA
Trigger: GGCGATAGGGTAAGGTGTGCAACGGGAAAAGTTGTT...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCGCCCTGCACTCTTGCTaGCAGGAACACAGGGTCAAC +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIALHSC*QEHRVN
Trigger: GTTGACCCTGTGTTCCTGGCAGCAAGAGTGCAGGGC...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTGGTTTAGCTCATATATaGTATTTGCCCCATATGGTT +
Preference number: 4 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSGLAHI*YLPHMV
Trigger: AACCATATGGGGCAAATAGCATATATGAGCTAAACC...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCGGGGCAGATGGGACATaGAGTCCACAGGAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIGADGT*SPQEWS
Trigger: TGACCACTCCTGTGGACTGCATGTCCCATCTGCCCC...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTGGAAGAGCCACAGGATaGAAAAACTTTCCCCATCTC +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGGRATG*KNFPHL
Trigger: GAGATGGGGAAAGTTTTTCCATCCTGTGGCTCTTCC...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTAGACGCGGTCGCAAGTaGTGGTGTTTGCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGRRGRK*WCLLCL
Trigger: AAGACAGAGCAAACACCACCACTTGCGACCGCGTCT...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCGAGTGCAGGTGCGGCTaGGGACAGGGTGGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISECRCG*GQGGLL
Trigger: CAAGAGGCCACCCTGTCCCCAGCCGCACCTGCACTC...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGACAAACTTGAGCCCATaGGAAATGGAGGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGTNLSP*EMEVLS
Trigger: AGAGAGCACCTCCATTTCCCATGGGCTCAAGTTTGT...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGCCCTCTCCCCCAAATaGATGCTTGTGAACCTGTCT +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGALSPK*MLVNLS
Trigger: AGACAGGTTCACAAGCATCCATTTGGGGGAGAGGGC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCTCAAAGCCCCTGCTCTaGGCTGGTGAGTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLISKPLL*AGELSP
Trigger: TGGGCTCAACTCACCAGCCCAGAGCAGGGGCTTTGA...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACTCCTGGTCATGTGGCTaGGCGTCTTTTGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHSWSCG*ASFASQ
Trigger: CTGGGAAGCAAAAGACGCCCAGCCACATGACCAGGA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGCAAGCATTGCTAGGTaGGACCACTCATCCCTGATG +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGASIAR*DHSSLM
Trigger: CATCAGGGATGAGTGGTCCCACCTAGCAATGCTTGC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTTCCCCCGTTACCAGCTaGGCTCTATCTACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGSPVTS*ALSTER
Trigger: TCTCTCTGTAGATAGAGCCCAGCTGGTAACGGGGGA...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTCCCCCTGCAGTTGGGTaGCTCCCCCGTTACCAGCTG +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFPPAVG*LPRYQL
Trigger: CAGCTGGTAACGGGGGAGCCACCCAACTGCAGGGGG...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGAAAACAGTCACACCATaGGTGGAAATGGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGKTVTP*VEMGKE
Trigger: CTCCTTCCCCATTTCCACCCATGGTGTGACTGTTTT...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTGTAGATAGAAGGCTCTaGACTCTGAGTGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGVDRRL*TLSANW
Trigger: CCAGTTTGCACTCAGAGTCCAGAGCCTTCTATCTAC...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTCCTCTAATCATGGGTTaGGTCACTGGCCAAGCTCGA +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGPLIMG*VTGQAR
Trigger: TCGAGCTTGGCCAGTGACCCAACCCATGATTAGAGG...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTAGGTGCACAGTGAAATaGTGCAGAAGGTTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGRCTVK*CRRFLP
Trigger: TGGGAGGAACCTTCTGCATCATTTCACTGTGCACCT...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCTCCCCATCTCAGAGATaGGGCAACACAAAGTCCGGC +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLISPSQR*GNTKSG
Trigger: GCCGGACTTTGTGTTGCCTCATCTCTGAGATGGGGA...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTCCCCATCCTCGCCAGTaGTGGGGATCAAGACGCGGT +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFPHPRQ*WGSRRG
Trigger: ACCGCGTCTTGATCCCCATCACTGGCGAGGATGGGG...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACTCTCTGCTACACAGTTaGCCATGGCTACACCAGCTC +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHSLLHS*PWLHQL
Trigger: GAGCTGGTGTAGCCATGGTCAACTGTGTAGCAGAGA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACGGAGTTAGCAGAGTCTaGCCTACAGAGCCTCACAAG +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHGVSRV*PTEPHK
Trigger: CTTGTGAGGCTCTGTAGGTCAGACTCTGCTAACTCC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCCCCCAGGCTCAAGGTTaGCTTGCATGGAGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIPQAQG*LAWSSK
Trigger: CTTTGAGCTCCATGCAAGTCAACCTTGAGCCTGGGG...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCAACCACACCAAAGGATaGCCAGAGTGTATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQANHTKG*PECISS
Trigger: GGAAGAGATACACTCTGGTCATCCTTTGGTGTGGTT...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCCGAGGCACAGACACTTaGTGTGAGAATTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQARGTDT*CENSIP
Trigger: TGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCG...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGGTTCAGCAACAAAGATaGCCTTGCACTCTGGGTTAT +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGVQQQR*PCTLGY
Trigger: ATAACCCAGAGTGCAAGGTCATCTTTGTTGCTGAAC...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCTTTCTCTGGGGGACCTaGATGAAGAATAGAATCCTT +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVFLWGT*MKNRIL
Trigger: AAGGATTCTATTCTTCATTCAGGTCCCCCAGAGAAA...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTCCTCACAAGGACACTTaGTCCGCTGCAAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGPHKDT*SAAKQK
Trigger: TTTCTGCTTTGCAGCGGATCAAGTGTCCTTGTGAGG...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCAGGAGTTGCATTTGCTaGGGTTGGTGTTTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQARSCIC*GWCLPK
Trigger: CTTTGGCAAACACCAACCTCAGCAAATGCAACTCCT...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTTCTATACTACCTTCCTaGAGCTGGTTCCATCACTGT +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGSILPS*SWFHHC
Trigger: ACAGTGATGGAACCAGCTTCAGGAAGGTAGTATAGA...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACAGAACTTCCAGAGGCTaGGACAGCAGCCTCGACATA +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHRTSRG*DSSLDI
Trigger: TATGTCGAGGCTGCTGTCTCAGCCTCTGGAAGTTCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTTCGGGGTCGAAGCCCTaGCGGTGGCACTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSSGSKP*RWHFLQ
Trigger: CTGGAGGAAGTGCCACCGGCAGGGCTTCGACCCCGA...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCCCTGCAGTGCTAATTTaGTCAAATGAGCCCGAGACA +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAPAVLI*SNEPET
Trigger: TGTCTCGGGCTCATTTGAGCAAATTAGCACTGCAGG...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCAACAAGGGGATTCTCTaGTACACAGTTGACCATGGC +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQANKGIL*YTVDHG
Trigger: GCCATGGTCAACTGTGTAGCAGAGAATCCCCTTGTT...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGGCTCAAGGTTGACTTaGATGGAGCTCAAAGCACAT +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAGSRLT*MELKAH
Trigger: ATGTGCTTTGAGCTCCATGCAAGTCAACCTTGAGCC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGGACAGCTACACACAGTaGATTCATTTCCGGCATCTT +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGDSYTQ*IHFRHL
Trigger: AAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTC...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCATGGAGAAGACACAGTaGCCAGAGTCACAAATCATT +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVMEKTQ*PESQII
Trigger: AATGATTTGTGACTCTGGGCACTGTGTCTTCTCCAT...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCTTAAGTGTGCTTAAGTaGGACAGGTCCAGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQALSVLK*DRSSPV
Trigger: AACAGGGCTGGACCTGTCGCACTTAAGCACACTTAA...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCTTCGAACTACTGCTGTaGAACTCTTCATGTTCAGAC +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVFELLL*NSSCSD
Trigger: GTCTGAACATGAAGAGTTGCACAGCAGTAGTTCGAA...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCGCTTCTTCGAACTACTaGTGTGCAACTCTTCATGTT +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVASSNY*CATLHV
Trigger: AACATGAAGAGTTGCACAGCAGTAGTTCGAAGAAGC...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGCTGAGGTTGGTGTTTaGCAAAGAGATGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGAEVGV*QRDASF
Trigger: GAAGCTGGCATCTCTTTGGCAAACACCAACCTCAGC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCCCTACCCCAGCCCAGTaGAGCAAAGCTCAGTCAGTA +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIPTPAQ*SKAQSV
Trigger: TACTGACTGAGCTTTGCTGCACTGGGCTGGGGTAGG...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGCAGGGGTTGGCTCCTTaGATTTTATTCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGQGLAP*ILFCSL
Trigger: GAGAGAACAGAATAAAATGCAAGGAGCCAACCCCTG...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGTCCCCAAATGCTCTCTaGTTCCTCAGTCCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGSPNAL*FLSPFK
Trigger: TTTGAAAGGACTGAGGAAGCAGAGAGCATTTGGGGA...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCACTCTACCTTGGCACTaGCATCGTCTTGATTTAGTT +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVTLPWH*HRLDLV
Trigger: AACTAAATCAAGACGATGCCAGTGCCAAGGTAGAGT...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACAGACGCGGTCGCAAGTaGTGGTGTTTGCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHRRGRK*WCLLCL
Trigger: AAGACAGAGCAAACACCACCACTTGCGACCGCGTCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTGAGTGCAGGTGCGGCTaGGGACAGGGTGGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSECRCG*GQGGLL
Trigger: CAAGAGGCCACCCTGTCCCCAGCCGCACCTGCACTC...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTTATTCCACCTCTGTTTaGGTGCTAGCCACTAAGACT +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGYSTSV*VLATKT
Trigger: AGTCTTAGTGGCTAGCACCCAAACAGAGGTGGAATA...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGTTAAGGAGCAACACCTaGTCCTTGGGAATGAAGTGT +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGLRSNT*SLGMKC
Trigger: ACACTTCATTCCCAAGGACCAGGTGTTGCTCCTTAA...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCGACGGAGAGGGTCTATaGGTGACCCGGAAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIDGEGL*VTRKGK
Trigger: CTTTCCTTTCCGGGTCACCCATAGACCCTCTCCGTC...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTAACCTCCTGTGTCAATaGTATCCCTCCCTTCATATC +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGNLLCQ*YPSLHI
Trigger: GATATGAAGGGAGGGATACCATTGACACAGGAGGTT...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTACTCTGAGTGCAAACTaGCTGCTAGCTCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGTLSAN*LLAQGH
Trigger: GTGACCTTGAGCTAGCAGCCAGTTTGCACTCAGAGT...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCCGTGCCTCCCCTCTCTaGGGCAGCTGGTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISRASPL*GSWSSQ
Trigger: CTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACG...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 72 bp CTGGGTTGTCTGAGCATCCACCGAAGCGTCCTTTCATaGATGCAGATCTTGCCTCTCAGCATGTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LGCLSIHRSVLS*MQILPLSMFSS
Trigger: GGAAGAGAACATGCTGAGAGGCAAGATCTGCATCAATGAAAGGACGCTTCGGTGGATGCTCAGACAACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGAGGAGTAGTGGTATTTaGTGTACGTACATCGCTCAA +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGRSSGI*CTYIAQ
Trigger: TTGAGCGATGTACGTACATCAAATACCACTACTCCT...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGCCACCGCCATGCCCATaGAGCCAGCCGTCATTCTGC +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLPPPCP*SQPSFC
Trigger: GCAGAATGACGGCTGGCTTCATGGGCATGGCGGTGG...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTTCCAGCCAAAGAGGATaGTGGCCACCGCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFSSQRG*WPPPCP
Trigger: TGGGCATGGCGGTGGCCATCATCCTCTTTGGCTGGA...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTCCAAAAGTCAAGAACTaGTGGAAGAGCCACAGGATG +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGPKVKN*WKSHRM
Trigger: CATCCTGTGGCTCTTCCATCAGTTCTTGACTTTTGG...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACGGCTTTGTTACCCTGTaGTATGACTGGTTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHGFVTL*YDWLGV
Trigger: CACCCCTAACCAGTCATATCACAGGGTAACAAAGCC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGAATATCATACAAACTTaGGCCCATGGGAAATGGAGG +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGNIIQT*AHGKWR
Trigger: CCTCCATTTCCCATGGGCTCAAGTTTGTATGATATT...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGAATATCATACAAACTTaGGCCCATGGGAAATGGAGG +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGNIIQT*AHGKWR
Trigger: CCTCCATTTCCCATGGGCTCAAGTTTGTATGATATT...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACCCAAATGGATGCTTGTaGACCTGTCTGTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHPNGCL*TCLSLP
Trigger: AGGAAGGGACAGACAGGTTCACAAGCATCCATTTGG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACGAAGTTTTGAGGTCATaGCCATTTGGATTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHEVLRS*PFGLGP
Trigger: CGGGCCCAATCCAAATGGTCATGACCTCAAAACTTC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACTCTCTGCTGCCTTGCTaGGGATTTTCTGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHSLLPC*GFSGAS
Trigger: AGAAGCACCAGAAAATCCTCAGCAAGGCAGCAGAGA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACACCGTTGAAATGCTTTaGGAATACCCAGGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHTVEML*EYPGVG
Trigger: GCCAACCCCTGGGTATTCTCAAAGCATTTCAACGGT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCCAAACCTTGTTATACTaGCCGTTGAAATGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVQTLLY*PLKCFE
Trigger: CTCAAAGCATTTCAACGGTCAGTATAACAAGGTTTG...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCAGCCCTGCCACGTACTaGATAAGGCCTCGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISSPATY*IRPRSQ
Trigger: CTGGGACCGAGGCCTTATGCAGTACGTGGCAGGGCT...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGAAGGAAATAAAAGTTaGAATGGGCCCCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAEGNKS*NGPQAQ
Trigger: TTGAGCCTGGGGCCCATTGCAACTTTTATTTCCTTC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCAGGGCCCTGCACTCTTaGTGCCAGGAACACAGGGTC +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISRALHS*CQEHRV
Trigger: GACCCTGTGTTCCTGGCAGCAAGAGTGCAGGGCCCT...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGTGTTTGCCAAAGAGATaGCAGCTTCTTCGAACTACT +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGCLPKR*QLLRTT
Trigger: AGTAGTTCGAAGAAGCTGGCATCTCTTTGGCAAACA...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCGCTCTGGACTCTGAGTaGAAACTGGCTGCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIALDSE*KLAASS
Trigger: TGAGCTAGCAGCCAGTTTGCACTCAGAGTCCAGAGC...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTGATTTACCTAATCCCTaGTCCTCTTTCCTACTTCCT +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGDLPNP*SSFLLP
Trigger: AGGAAGTAGGAAAGAGGAGCAGGGATTAGGTAAATC...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGCATTGTTAGAATCCTaGAGTACACACCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAALLES*STHHSL
Trigger: CAAGGAGTGGTGTGTACTGCAGGATTCTAACAATGC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTAGCCATGCCTCCGCTTaGCGGCTACACCATGGGCAT +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFSHASA*RLHHGH
Trigger: ATGCCCATGGTGTAGCCGCCAAGCGGAGGCATGGCT...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCCCCACCTATGAAACATaGTCCAAAAGTTTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAPTYET*SKSLAA
Trigger: TGCTGCCAAACTTTTGGACCATGTTTCATAGGTGGG...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGGAGAGAGAAGGTAAGTaGTTAGTAGGTGAGAAAAGG +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGEREGK*LVGEKR
Trigger: CCTTTTCTCACCTACTAACCACTTACCTTCTCTCTC...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTGAGAGAGAAGGTAAGTaGTTAGTAGGTGAGAAAAGG +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGEREGK*LVGEKR
Trigger: CCTTTTCTCACCTACTAACCACTTACCTTCTCTCTC...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACTCTATCCTGGTCATGTaGCTGGGCGTCTTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHSILVM*LGVFCF
Trigger: GAAGCAAAAGACGCCCAGCCACATGACCAGGATAGA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCGCAAGCATTGCTAGGTaGGACCACTCATCCCTGATG +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIASIAR*DHSSLM
Trigger: CATCAGGGATGAGTGGTCCCACCTAGCAATGCTTGC...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCCCAGGTGGGCATCTTTaGAGACCTAAGCAGCACATC +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIPGGHL*RPKQHI
Trigger: GATGTGCTGCTTAGGTCTCCAAAGATGCCCACCTGG...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGAGACAAGCACTCATTaGGGAAGTTTTGAGGTCATG +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAETSTH*GSFEVM
Trigger: CATGACCTCAAAACTTCCCCAATGAGTGCTTGTCTC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCACCAGTGCGGTTCTGTaGTGTACACTGCTCACATGG +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLITSAVL*CTLLTW
Trigger: CCATGTGAGCAGTGTACACCACAGAACCGCACTGGT...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGGCTATTTGCCCCATATaGTTTACTCATTCTGTCACC +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGAICPI*FTHSVT
Trigger: GGTGACAGAATGAGTAAACCATATGGGGCAAATAGC...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGGATCGTCAAAGTGGGTaGGAAAAGGAATCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGDRQSG*EKESEN
Trigger: ATTCTCAGATTCCTTTTCCCACCCACTTTGACGATC...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTCCTCTCTGGGGCAGCTaGTCTTCTCAGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFPLWGS*SSQSCR
Trigger: CCTGCAGGACTGAGAAGACCAGCTGCCCCAGAGAGG...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCCATGGGTTGGGTCACTaGCCAAGCTCGACGTGCCTC +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISHGLGH*PSSTCL
Trigger: GAGGCACGTCGAGCTTGGCCAGTGACCCAACCCATG...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGAGAATACCCAGGGGTTaGCTCCTTGCATTTTATTCT +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGRIPRG*LLAFYS
Trigger: AGAATAAAATGCAAGGAGCCAACCCCTGGGTATTCT...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTAGAATACCCAGGGGTTaGCTCCTTGCATTTTATTCT +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGRIPRG*LLAFYS
Trigger: AGAATAAAATGCAAGGAGCCAACCCCTGGGTATTCT...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCGAGTTTTGTCAGTTATaGTCCCTGTCTAATGACCAT +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVEFCQL*SLSNDH
Trigger: ATGGTCATTAGACAGGGACCATAACTGACAAAACTC...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTAAAGTCACAGGAACCTaGCAATTTCCCTTTTCATCC +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGKVTGT*QFPFSS
Trigger: GGATGAAAAGGGAAATTGCCAGGTTCCTGTGACTTT...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 72 bp CTTGATCCGCTGCAAAGCAGAAAGTGTGCGGACCCTTaGGGAAGGGCGTTCTTTTCTTGTTTAGAACCTAGG +
Preference number: 4 (lower is better)
Translates to: LDPLQSRKCADP*GRAFFSCLEPR
Trigger: CCTAGGTTCTAAACAAGAAAAGAACGCCCTTCCCAAAGGGTCCGCACACTTTCTGCTTTGCAGCGGATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCAGGAGTAGTGGTATTTaGTGTACGTACATCGCTCAA +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQARSSGI*CTYIAQ
Trigger: TTGAGCGATGTACGTACATCAAATACCACTACTCCT...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTTTCTATAATGGGGAGTaGAGGTCTTGTTGGTTTATG +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGFYNGE*RSCWFM
Trigger: CATAAACCAACAAGACCTTCACTCCCCATTATAGAA...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTCCGGTAAGGAAGTCTTaGGTAGGGCACCCACACCTG +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFPVRKS*VGHPHL
Trigger: CAGGTGTGGGTGCCCTACTCAAGACTTCCTTACCGG...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCCAGGGAACTCACACATaGGACCTTTTGCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIQGTHT*DLLQKL
Trigger: CAGCTTCTGCAAAAGGTCTCATGTGTGAGTTCCCTG...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTAGTGTGGATGAATATTaGGATATAGGGCCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGSVDEY*DIGPSL
Trigger: GAGACTGGGCCCTATATCTCAATATTCATCCACACT...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTTATCATGAGTGTGGATaGATATTGAGATATAGGGCC +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGYHECG*ILRYRA
Trigger: GGCCCTATATCTCAATATTCATCCACACTCATGATA...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGAAAATACTAAGGCATTaGCCATGTGCCTTGGTTAAC +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGKILRH*PCALVN
Trigger: GTTAACCAAGGCACATGGTCAATGCCTTAGTATTTT...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGGAATTCATATGTTTTTaGCGAAGCTACTGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGEFICF*RSYWLQ
Trigger: CTGAAGCCAGTAGCTTCGTCAAAAACATATGAATTC...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACCCTGGTCCTTGGGAATaGAGTGTAGGAGTTGCATTT +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHPGPWE*SVGVAF
Trigger: AAATGCAACTCCTACACTTCATTCCCAAGGACCAGG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGATGAGAATGAGTTCATaGAAGCTCTTCACAGGAAAG +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGMRMSS*KLFTGK
Trigger: CTTTCCTGTGAAGAGCTTTCATGAACTCATTCTCAT...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCTCTCTGCTGCCTTGCTaGGGATTTTCTGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLISLLPC*GFSGAS
Trigger: AGAAGCACCAGAAAATCCTCAGCAAGGCAGCAGAGA...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTAGCTATGGCAGTGAGTaGCCCACCAGGAAGGACCCC +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSSYGSE*PTRKDP
Trigger: GGGGTCCTTCCTGGTGGGTCACTCACTGCCATAGCT...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCACCGTTGAAATGCTTTaGGAATACCCAGGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLITVEML*EYPGVG
Trigger: GCCAACCCCTGGGTATTCTCAAAGCATTTCAACGGT...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGTGTTATACTGACCGTTaGAATGCTTTGAGAATACCC +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGCYTDR*NALRIP
Trigger: GGGTATTCTCAAAGCATTTCAACGGTCAGTATAACA...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTAACACTCCAGGCGTTTaGGAGTTTTGTCAGTTATGG +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGNTPGV*EFCQLW
Trigger: CCATAACTGACAAAACTCTCAAACGCCTGGAGTGTT...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGTTGCACCTGTCCCTGTaGTTCCTGGCGTCCGTCTCG +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLLHLSL*FLASVS
Trigger: CGAGACGGACGCCAGGAAGCACAGGGACAGGTGCAA...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTTCGGGGTCGAAGCCCTaGCGGTGGCACTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALSGSKP*RWHFLQ
Trigger: CTGGAGGAAGTGCCACCGGCAGGGCTTCGACCCCGA...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCCCGGCGAGATGCAGGTaGCTGAGCCAACTCAACTCT +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISPARCR*LSQLNS
Trigger: AGAGTTGAGTTGGCTCAGGCACCTGCATCTCGCCGG...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGTCATTGACCCTAAATaGCCTCATAAGGTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGVIDPK*PHKVGF
Trigger: GAACCCAACCTTATGAGGGCATTTAGGGTCAATGAC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTTCACATGGCCCCAGCTaGCAACCCAGAGACAAGCAC +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFSHGPS*QPRDKH
Trigger: GTGCTTGTCTCTGGGTTGGCAGCTGGGGCCATGTGA...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGAGGGCCCTGCACTCTTaGTGCCAGGAACACAGGGTC +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLRALHS*CQEHRV
Trigger: GACCCTGTGTTCCTGGCAGCAAGAGTGCAGGGCCCT...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCATGGAGAAGACACAGTaGCCAGAGTCACAAATCATT +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAMEKTQ*PESQII
Trigger: AATGATTTGTGACTCTGGGCACTGTGTCTTCTCCAT...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTTGGCCAAGCTCGACGTaGCTCCCCTCTCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALWPSST*LPSLGQ
Trigger: CTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCA...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGAAATCAGCTCATTTTTaGTCAGTAACACAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGKSAHF*SVTQGS
Trigger: TGAGCCCTGTGTTACTGAGCAAAAATGAGCTGATTT...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCAGCCAGCCGTCATTCTaGGCAGGTACATACAGTACA +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLISQPSF*AGTYST
Trigger: TGTACTGTATGTACCTGCGCAGAATGACGGCTGGCT...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610315.1
CDS-3UTR CCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTTGTCCCTGTGCTTCCTaGCGTCCGTCTCGTACCAGT +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFCPCAS*RPSRTS
Trigger: ACTGGTACGAGACGGACGCCAGGAAGCACAGGGACA...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTAGCCATGCCTCCGCTTaGCGGCTACACCATGGGCAT +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSSHASA*RLHHGH
Trigger: ATGCCCATGGTGTAGCCGCCAAGCGGAGGCATGGCT...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTCCCACCTATGAAACATaGTCCAAAAGTTTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGPTYET*SKSLAA
Trigger: TGCTGCCAAACTTTTGGACCATGTTTCATAGGTGGG...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGCGGCTGGGGACAGGGTaGCCTCTTGTTTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLRLGTG*PLVSLG
Trigger: ACCCAGTGAAACAAGAGGCCACCCTGTCCCCAGCCG...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCAAGGGGCCTCTATCCTaGTCATGTGGCTGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISKGPLS*SCGWAS
Trigger: AGACGCCCAGCCACATGACCAGGATAGAGGCCCCTT...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTGAAAGCTTCCGTAACTaGTTGGAGTCACATGTTTTA +
Preference number: 4 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGESFRN*LESHVL
Trigger: TAAAACATGTGACTCCAACCAGTTACGGAAGCTTTC...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGCTATTTGCCCCATATaGTTTACTCATTCTGTCACC +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAAICPI*FTHSVT
Trigger: GGTGACAGAATGAGTAAACCATATGGGGCAAATAGC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCATTGACCATGTGCCTTaGTTAACAGTTAACTGGTTT +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVIDHVP*LTVNWF
Trigger: AAACCAGTTAACTGTTAACCAAGGCACATGGTCAAT...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACGAATATGACCTGCTTTaGCCTCTAGGACTTGGACAG +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHEYDLL*PLGLGQ
Trigger: CTGTCCAAGTCCTAGAGGCCAAAGCAGGTCATATTC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 72 bp CCTCTGGGTGATGTACCTGAGTTCATTATTCTGAATTaGACCCAGGTGGGCATCTTTGGAGACCTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: PLGDVPEFIILN*TQVGIFGDLSS
Trigger: GCTGCTTAGGTCTCCAAAGATGCCCACCTGGGTCAAATTCAGAATAATGAACTCAGGTACATCACCCAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 72 bp GCATCAATGAAAAGAGGGCAAACACAGCCCCAGACATaGAGAGCTTTGAGAGACAGACACGAGAATCACGTG +
Preference number: 4 (lower is better)
Translates to: ASMKRGQTQPQT*RALRDRHENHV
Trigger: CACGTGATTCTCGTGTCTGTCTCTCAAAGCTCTCAATGTCTGGGGCTGTGTTTGCCCTCTTTTCATTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTGTGACAGCTCAAAGTTaGTCCCGGCCACACAGGTGC +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSVTAQS*SRPHRC
Trigger: GCACCTGTGTGGCCGGGATCAACTTTGAGCTGTCAC...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTGTAGCGTGGGTAGCGTaGCAGCTCAAAGTTGATCCC +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFVAWVA*QLKVDP
Trigger: GGGATCAACTTTGAGCTGTCACGCTACCCACGCTAC...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTTGTGCAGGTGTGTACTaGCACAAACGTACACAAAAT +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGCAGVY*HKRTQN
Trigger: ATTTTGTGTACGTTTGTGTCAGTACACACCTGCACA...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGCCTGCTCTGGGCTGGTaGGTTGAGCCCAGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLPALGW*VEPRLF
Trigger: AAACAACCTGGGCTCAACTCACCAGCCCAGAGCAGG...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGTAGATGCCTCAGAGTaGCTGGATTATGAAAAATCT +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAVDASE*LDYEKS
Trigger: AGATTTTTCATAATCCAGTCACTCTGAGGCATCTAC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCTCCTCATTTTGTAGATaGGGAAGTTCAAGTATGGAG +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQASSFCR*GSSSME
Trigger: CTCCATACTTGAACTTCCTCATCTACAAAATGAGGA...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCCGAGGCACAGACACTTaGTGTGAGAATTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIRGTDT*CENSIP
Trigger: TGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCG...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCAGGAGTTGCATTTGCTaGGGTTGGTGTTTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIRSCIC*GWCLPK
Trigger: CTTTGGCAAACACCAACCTCAGCAAATGCAACTCCT...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCATGAGAATGAGTTCATaGAAGCTCTTCACAGGAAAG +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAMRMSS*KLFTGK
Trigger: CTTTCCTGTGAAGAGCTTTCATGAACTCATTCTCAT...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCTGCAGTCAGTTTCAGTaGAGTCCCCAAATGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLICSQFQ*SPQMLS
Trigger: AGAGAGCATTTGGGGACTTCACTGAAACTGACTGCA...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGCAAAGTCCGGCGAGATaGAGGTGCCTGAGCCAACTC +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLQSPAR*RCLSQL
Trigger: GAGTTGGCTCAGGCACCTGCATCTCGCCGGACTTTG...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGGTATTTATCTGGTCCTaGTATCAAAGAAGTCACTCA +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGVFIWS*YQRSHS
Trigger: TGAGTGACTTCTTTGATAGCAGGACCAGATAAATAC...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTCCATTGGCCAGGACTTaGCGTCTGAAAGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSPLART*RLKGAS
Trigger: AGAGGCCCCTTTCAGACGGCAAGTCCTGGCCAATGG...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACGTCATTGACCCTAAATaGCCTCATAAGGTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHVIDPK*PHKVGF
Trigger: GAACCCAACCTTATGAGGGCATTTAGGGTCAATGAC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTGCAACCCTGCTGGTGTaGACCAGCTCTTCCTATCTG +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFATLLV*TSSSYL
Trigger: CAGATAGGAAGAGCTGGTGCACACCAGCAGGGTTGC...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCTTCTGTGGTGTACACTaGTCACATGGCCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISFCGVH*SHGPSC
Trigger: GCAGCTGGGGCCATGTGAGCAGTGTACACCACAGAA...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCGTTTGCAAATCACTTTaGAATTTCTTTGTCACCCTT +
Preference number: 4 (lower is better)
Translates to: ERLRHAHNTDALVQTERVVCKSL*NFFVTL
Trigger: AAGGGTGACAAAGAAATTGCAAAGTGATTTGCAAAC...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTTTCGAACTACTGCTGTaGAACTCTTCATGTTCAGAC +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGFELLL*NSSCSD
Trigger: GTCTGAACATGAAGAGTTGCACAGCAGTAGTTCGAA...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGACATCTTCTGCCTACTaGCTCCACGCCACCACTGCC +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLTSSAY*LHATTA
Trigger: GGCAGTGGTGGCGTGGAGGCAGTAGGCAGAAGATGT...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACGCATTGTTAGAATCCTaGAGTACACACCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHALLES*STHHSL
Trigger: CAAGGAGTGGTGTGTACTGCAGGATTCTAACAATGC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCACAAACTTGAGCCCATaGGAAATGGAGGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLITNLSP*EMEVLS
Trigger: AGAGAGCACCTCCATTTCCCATGGGCTCAAGTTTGT...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTGGAAGGCAACCCTGCTaGTGTGCACCAGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSGRQPC*CAPALP
Trigger: AGGAAGAGCTGGTGCACACCAGCAGGGTTGCCTTCC...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTATGAGTGAGTTACTCTaGCTTCCGCATTCTTACATC +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGMSELL*LPHSYI
Trigger: GATGTAAGAATGCGGAAGCCAGAGTAACTCACTCAT...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACAACCTCCTGTGTCAATaGTATCCCTCCCTTCATATC +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHNLLCQ*YPSLHI
Trigger: GATATGAAGGGAGGGATACCATTGACACAGGAGGTT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCTTGGCTGAGAAGACGTaGAGACAAGGTGAGGTAATG +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLILAEKT*RQGEVM
Trigger: CATTACCTCACCTTGTCTCCACGTCTTCTCAGCCAA...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCATTGCATATGTGGCTTaGATCATGGTTCCATTGGAT +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAIAYVA*IMVPLD
Trigger: ATCCAATGGAACCATGATCCAAGCCACATATGCAAT...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCTTGGCCTCTAGGACTTaGACAGGTCATAAGGGACAT +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLILASRT*TGHKGH
Trigger: ATGTCCCTTATGACCTGTCCAAGTCCTAGAGGCCAA...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGAATAGTTTCAAGATCTaGTTTGAATCGCCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGNSFKI*FESPFL
Trigger: CAGGAAAGGCGATTCAAACCAGATCTTGAAACTATT...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTAGCCATAGCCATGGCTaGTGTCATCAGGGAGTCCGT +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSSHSHG*CHQGVR
Trigger: ACGGACTCCCTGATGACATCAGCCATGGCTATGGCT...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTGTCCTCGGGACAGGTTaGACAGAAGGGGCTAAGGTA +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSVLGTG*TEGAKV
Trigger: TACCTTAGCCCCTTCTGTTCAACCTGTCCCGAGGAC...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTCGAGATGCAGGTGCCTaGGCCAACTCAACTCTACCT +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSRDAGA*ANSTLP
Trigger: AGGTAGAGTTGAGTTGGCTCAGGCACCTGCATCTCG...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCTGTTACCCTGTGATATaGCTGGTTAGGGGTGGCGTC +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISCYPVI*LVRGGV
Trigger: GACGCCACCCCTAACCAGTCATATCACAGGGTAACA...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACATAATGATAGGTCTGTaGGCCAGCATCCTCAAACAT +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHIMIGL*ASILKH
Trigger: ATGTTTGAGGATGCTGGCTCACAGACCTATCATTAT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTGGAGTTAGCAGAGTCTaGCCTACAGAGCCTCACAAG +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFGVSRV*PTEPHK
Trigger: CTTGTGAGGCTCTGTAGGTCAGACTCTGCTAACTCC...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGGGGACCACTCATCCCTaGTGGGAAGATATGCACCTG +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLGTTHP*WEDMHL
Trigger: CAGGTGCATATCTTCCCATCAGGGATGAGTGGTCCC...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTTCCTCATTTTGTAGATaGGGAAGTTCAAGTATGGAG +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGSSFCR*GSSSME
Trigger: CTCCATACTTGAACTTCCTCATCTACAAAATGAGGA...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCCCCTTCAAACATTGCTaGTTTACTTTTATTTTGGGG +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAPFKHC*FTFILG
Trigger: CCCCAAAATAAAAGTAAATCAGCAATGTTTGAAGGG...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTTTGGTGGAGTTGTACTaGCGGCTGCACTCGTCCGCG +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALLVELY*RLHSSA
Trigger: CGCGGACGAGTGCAGCCGGCAGTACAACTCCACCAA...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTAGAAAGGCTGCTGAGTaGCTGGCAAAGCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFRKAAE*LAKLPK
Trigger: CTTTGGGAGCTTTGCCAGGCACTCAGCAGCCTTTCT...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCTGGCTGGGCGTCTTTTaGTTCCCAGCAGGATCAGAT +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISWLGVF*FPAGSD
Trigger: ATCTGATCCTGCTGGGAAGCAAAAGACGCCCAGCCA...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCGGGTTCTTAAAAATCTaGCCCCTTAGTCTATCCCAC +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIGFLKI*PLSLSH
Trigger: GTGGGATAGACTAAGGGGGCAGATTTTTAAGAACCC...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGCACAAATCATTTCAGTaGAGAGCTGTAGTGAAATTT +
Preference number: 4 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGHKSFQ*RAVVKF
Trigger: AAATTTCACTACAGCTCTGCACTGAAATGATTTGTG...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCGGACACTTGATCCGCTaGAAAGCAGAAAGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISGHLIR*KAESVR
Trigger: CCGCACACTTTCTGCTTTGCAGCGGATCAAGTGTCC...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTAATACACAAGGGGACTaGGCACCCCCAGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALNTQGD*APPEPW
Trigger: CCAGGGCTCTGGGGGTGCGCAGTCCCCTTGTGTATT...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCGCCCTCTCCCCCAAATaGATGCTTGTGAACCTGTCT +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISALSPK*MLVNLS
Trigger: AGACAGGTTCACAAGCATCCATTTGGGGGAGAGGGC...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCCTATCCCACACCAGCTaGAAGATGGCATGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISLSHTS*KMAWKA
Trigger: TGCCTTCCATGCCATCTTCCAGCTGGTGTGGGATAG...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTGAGGTCATGACCATTTaGATTGGGCCCGCGGTAGAT +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFEVMTI*IGPAVD
Trigger: ATCTACCGCGGGCCCAATCCAAATGGTCATGACCTC...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTGAAAAGCTCAGCCAGTaGGAGGAATGGGGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFEKLSQ*EEWGSG
Trigger: TCCAGAACCCCATTCCTCCCACTGGCTGAGCTTTTC...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACGATCGTCAAAGTGGGTaGGAAAAGGAATCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHDRQSG*EKESEN
Trigger: ATTCTCAGATTCCTTTTCCCACCCACTTTGACGATC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTTTTGGTAGCAACCCTTaGCCAGACTCCCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFFGSNP*PDSLLL
Trigger: CAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAA...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGAGTTTTGTCAGTTATaGTCCCTGTCTAATGACCAT +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGEFCQL*SLSNDH
Trigger: ATGGTCATTAGACAGGGACCATAACTGACAAAACTC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACAAAGTCACAGGAACCTaGCAATTTCCCTTTTCATCC +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHKVTGT*QFPFSS
Trigger: GGATGAAAAGGGAAATTGCCAGGTTCCTGTGACTTT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 72 bp TCAGCTACCTCACAGCCAGAAAGCTTCCGTAACTGGTaGGAGTCACATGTTTTAATCTGTGGTCAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SATSQPESFRNW*ESHVLICGQAL
Trigger: AAGGGCTTGACCACAGATTAAAACATGTGACTCCAACCAGTTACGGAAGCTTTCTGGCTGTGAGGTAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 72 bp CCTAAATGCCCTCATAAGGTTGGGTTCCACTTTGATTaGGAGTTAGCAGAGTCTGACCTACAGAGCCTCACA +
Preference number: 4 (lower is better)
Translates to: PKCPHKVGFHFD*ELAESDLQSLT
Trigger: TGTGAGGCTCTGTAGGTCAGACTCTGCTAACTCCAAATCAAAGTGGAACCCAACCTTATGAGGGCATTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 72 bp TCATATGCCAGTAAGAAGTTTGAACTTGACCTGGGGTaGCGGCTGGTGACTTTAGTGAGGTCATTGACCCTA +
Preference number: 4 (lower is better)
Translates to: SYASKKFELDLG*RLVTLVRSLTL
Trigger: TAGGGTCAATGACCTCACTAAAGTCACCAGCCGCAACCCCAGGTCAAGTTCAAACTTCTTACTGGCATATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 72 bp AAAAGAGGGCAAACACAGCCCCAGACATTGAGAGCTTaGAGAGACAGACACGAGAATCACGTGTGTATGTCA +
Preference number: 4 (lower is better)
Translates to: KRGQTQPQTLRA*RDRHENHVCMS
Trigger: TGACATACACACGTGATTCTCGTGTCTGTCTCTCAAAGCTCTCAATGTCTGGGGCTGTGTTTGCCCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCCCTGGGGATGGTTGCTaGGGAGTAGTGGTATTTGAT +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISPGDGC*GVVVFD
Trigger: ATCAAATACCACTACTCCTCAGCAACCATCCCCAGG...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTACACACATCACAGCATaGCTCCAAGGCTCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSTHITA*LQGSSL
Trigger: CAGACTGGAGCCTTGGAGTCATGCTGTGATGTGTGT...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTCAGGGAACTCACACATaGGACCTTTTGCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFQGTHT*DLLQKL
Trigger: CAGCTTCTGCAAAAGGTCTCATGTGTGAGTTCCCTG...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCATAATGATAGGTCTGTaGGCCAGCATCCTCAAACAT +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIIMIGL*ASILKH
Trigger: ATGTTTGAGGATGCTGGCTCACAGACCTATCATTAT...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCTCCGGCATCTTATCATaGGTGTGGATGAATATTGAG +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLISGILS*VWMNIE
Trigger: CTCAATATTCATCCACACTCATGATAAGATGCCGGA...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCCACAGACACTTGATGTaGGAATTCCATTCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISHRHLM*EFHSSG
Trigger: CCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTG...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTCAGACTCCCTGCTTCTaGCACTGCAAGCCACATTTA +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFQTPCF*HCKPHL
Trigger: TAAATGTGGCTTGCAGTGTCAGAAGCAGGGAGTCTG...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCCTCTTACTAAGCAGGTaGAGCAGAACTTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISLLLSR*SRTSRG
Trigger: GCCTCTGGAAGTTCTGCTTCACCTGCTTAGTAAGAG...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTTTTCAAGATCTGGTTTaGATCGCCTTTCCTGTAATT +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGFQDLV*IAFPVI
Trigger: AATTACAGGAAAGGCGATTCAAACCAGATCTTGAAA...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTCAAAGTCCGGCGAGATaGAGGTGCCTGAGCCAACTC +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALQSPAR*RCLSQL
Trigger: GAGTTGGCTCAGGCACCTGCATCTCGCCGGACTTTG...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTCCTGATGGGAAGATATaGACCTGGGCTCAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALPDGKI*TWAQGA
Trigger: AGCGCCCTGAGCCCAGGTGCATATCTTCCCATCAGG...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGTTTGCAAATCACTTTaGAATTTCTTTGTCACCCTT +
Preference number: 4 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAVCKSL*NFFVTL
Trigger: AAGGGTGACAAAGAAATTGCAAAGTGATTTGCAAAC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGGTTTAGCTCATATATaGTATTTGCCCCATATGGTT +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGGLAHI*YLPHMV
Trigger: AACCATATGGGGCAAATAGCATATATGAGCTAAACC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTCCTCCACGCCACCACTaGCTCCACCATCTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALPPRHH*LHHLQS
Trigger: AGACTGAAGATGGTGGAGGCAGTGGTGGCGTGGAGG...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACAAATCAGCTCATTTTTaGTCAGTAACACAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHKSAHF*SVTQGS
Trigger: TGAGCCCTGTGTTACTGAGCAAAAATGAGCTGATTT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCAGTGAAGTCCCCAAATaGTCTCTGCTTCCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISSEVPK*SLLPQS
Trigger: GGACTGAGGAAGCAGAGAGCATTTGGGGACTTCACT...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTCCCGAGACACTGGGGTaGATTTATTCCACCTCTGTT +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFPETLG*IYSTSV
Trigger: AACAGAGGTGGAATAAATCCACCCCAGTGTCTCGGG...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGGCGTTCACAACTCTCTaGCTGACTTTGCTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLAFTTL*LTLLAS
Trigger: GCTGGCAAGCAAAGTCAGCCAGAGAGTTGTGAACGC...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTGCGTTCACAACTCTCTaGCTGACTTTGCTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSAFTTL*LTLLAS
Trigger: GCTGGCAAGCAAAGTCAGCCAGAGAGTTGTGAACGC...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCAGAGTGGTAGGAAGATaGGTTGGAAGACGTGTAAAT +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIRVVGR*VGRRVN
Trigger: ATTTACACGTCTTCCAACCCATCTTCCTACCACTCT...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGTGTTCGTATTTATCTaGTCCTGCTATCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGVFVFI*SCYQRS
Trigger: ACTTCTTTGATAGCAGGACCAGATAAATACGAACAC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTAAGGGGCCTCTATCCTaGTCATGTGGCTGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALKGPLS*SCGWAS
Trigger: AGACGCCCAGCCACATGACCAGGATAGAGGCCCCTT...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCCATTCTAAATGCCTCTaGGTGATGTACCTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIHSKCL*VMYLSS
Trigger: TGAACTCAGGTACATCACCCAGAGGCATTTAGAATG...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTAACATCGTATTTCCCTaGAAAGGGCTGGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFNIVFP*KGLAVS
Trigger: GGACACAGCCAGCCCTTTCCAGGGAAATACGATGTT...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGACAACACAGACGCACTaGTACAGACGGAGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLTTQTH*YRRRGS
Trigger: AGACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGT...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACATTGCATATGTGGCTTaGATCATGGTTCCATTGGAT +
Preference number: 4 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHIAYVA*IMVPLD
Trigger: ATCCAATGGAACCATGATCCAAGCCACATATGCAAT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTAGAGGTAGGCAATGGTaGGTTGAGTCCCAGTCCAAG +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSRGRQW*VESQSK
Trigger: CTTGGACTGGGACTCAACCCACCATTGCCTACCTCT...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 72 bp TTTGTTTATGAAACAAGGGGATTCTCTGCTACACAGTaGACCATGGCTACACCAGCTCAGGGATTCTCACCT +
Preference number: 4 (lower is better)
Translates to: FVYETRGFSATQ*TMATPAQGFSP
Trigger: AGGTGAGAATCCCTGAGCTGGTGTAGCCATGGTCAACTGTGTAGCAGAGAATCCCCTTGTTTCATAAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTCTCTATCTGGGGCCATaGAACCACTACAGTGATAAG +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFLYLGP*NHYSDK
Trigger: CTTATCACTGTAGTGGTTTCATGGCCCCAGATAGAG...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCCTCTATCTGGGGCCATaGAACCACTACAGTGATAAG +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISLYLGP*NHYSDK
Trigger: CTTATCACTGTAGTGGTTTCATGGCCCCAGATAGAG...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGGTCTCTGTGACTCCATaGTCCCTGAAGTTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLVSVTP*SLKLKG
Trigger: CCCTTTCAACTTCAGGGATCATGGAGTCACAGAGAC...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCAACCACACCAAAGGATaGCCAGAGTGTATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISNHTKG*PECISS
Trigger: GGAAGAGATACACTCTGGTCATCCTTTGGTGTGGTT...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGGAAGTTTTGAGGTCATaGCCATTTGGATTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLEVLRS*PFGLGP
Trigger: CGGGCCCAATCCAAATGGTCATGACCTCAAAACTTC...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTCACAGACACTTGATGTaGGAATTCCATTCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSHRHLM*EFHSSG
Trigger: CCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTG...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTCAGACTCCCTGCTTCTaGCACTGCAAGCCACATTTA +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSQTPCF*HCKPHL
Trigger: TAAATGTGGCTTGCAGTGTCAGAAGCAGGGAGTCTG...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTGATGATATTAGCAGGTaGCTGGCCCAGGTGACGAAA +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSDDISR*LAQVTK
Trigger: TTTCGTCACCTGGGCCAGTCACCTGCTAATATCATC...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTTGCAGTCAGTTTCAGTaGAGTCCCCAAATGCTCTCT +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFCSQFQ*SPQMLS
Trigger: AGAGAGCATTTGGGGACTTCACTGAAACTGACTGCA...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTAACAACTTTTCCCGTTaGACACCTTACCCTATCGCC +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFNNFSR*TPYPIA
Trigger: GGCGATAGGGTAAGGTGTGCAACGGGAAAAGTTGTT...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTGGCTCAAGGTTGACTTaGATGGAGCTCAAAGCACAT +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFGSRLT*MELKAH
Trigger: ATGTGCTTTGAGCTCCATGCAAGTCAACCTTGAGCC...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCTGGTCTTCTCAGTCCTaGAGGGAGACAGCTGTTTAT +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISWSSQS*RETAVY
Trigger: ATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACCA...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCCACCATGGGTGGAAATaGGGAAGGAGTATGAGAATG +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISHHGWK*GRSMRM
Trigger: CATTCTCATACTCCTTCCCCATTTCCACCCATGGTG...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCAAAACAGTCACACCATaGGTGGAAATGGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISKTVTP*VEMGKE
Trigger: CTCCTTCCCCATTTCCACCCATGGTGTGACTGTTTT...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTACTCTGAGTGCAAACTaGCTGCTAGCTCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSTLSAN*LLAQGH
Trigger: GTGACCTTGAGCTAGCAGCCAGTTTGCACTCAGAGT...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTACACACATCACAGCATaGCTCCAAGGCTCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALTHITA*LQGSSL
Trigger: CAGACTGGAGCCTTGGAGTCATGCTGTGATGTGTGT...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGAGGGGAGATGTCCAGTaGCAAAGGACAGCTTCTATA +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLRGDVQ*QRTASI
Trigger: TATAGAAGCTGTCCTTTGTCACTGGACATCTCCCCT...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTTGGGATTCATGGCCTTaGATATCAAGAGGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFWDSWP*ISRGKG
Trigger: TCCTTTCCCTCTTGATATTCAAGGCCATGAATCCCA...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTTCATGGCAGCATCAATaGAAAGAGGGCAAACACAGC +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSSWQHQ*KEGKHS
Trigger: GCTGTGTTTGCCCTCTTTTCATTGATGCTGCCATGA...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTACTGGCTTCAGCAACTaGCAAGAGAAAGAAGATCCC +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSTGFSN*QEKEDP
Trigger: GGGATCTTCTTTCTCTTGTCAGTTGCTGAAGCCAGT...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTCCTGGTCCTTGGGAATaGAGTGTAGGAGTTGCATTT +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSPGPWE*SVGVAF
Trigger: AAATGCAACTCCTACACTTCATTCCCAAGGACCAGG...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTCATGGTTCCATTGGATaGCGCTGGTCTATACTACCT +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSHGSIG*RWSILP
Trigger: AGGTAGTATAGACCAGCGTCATCCAATGGAACCATG...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTACACCACTCCTTGTCTaGCCAATCAGAAAGCACTAT +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFTPLLV*PIRKHY
Trigger: ATAGTGCTTTCTGATTGGTCAGACAAGGAGTGGTGT...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTGCAAGTGGTGGTGTTTaGTCTGTCTTCAAGAGACCA +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSASGGV*SVFKRP
Trigger: TGGTCTCTTGAAGACAGAGCAAACACCACCACTTGC...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTGCTCTGGACTCTGAGTaGAAACTGGCTGCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALALDSE*KLAASS
Trigger: TGAGCTAGCAGCCAGTTTGCACTCAGAGTCCAGAGC...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGAGGATCCTTCTCTGCTaGCTTGCTGAGGATTTTCTG +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLRILLC*LAEDFL
Trigger: CAGAAAATCCTCAGCAAGGCAGCAGAGAAGGATCCT...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCCAGGGGTTGGCTCCTTaGATTTTATTCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISQGLAP*ILFCSL
Trigger: GAGAGAACAGAATAAAATGCAAGGAGCCAACCCCTG...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTCTATCCCACACCAGCTaGAAGATGGCATGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALLSHTS*KMAWKA
Trigger: TGCCTTCCATGCCATCTTCCAGCTGGTGTGGGATAG...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTACCAGTGCGGTTCTGTaGTGTACACTGCTCACATGG +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALTSAVL*CTLLTW
Trigger: CCATGTGAGCAGTGTACACCACAGAACCGCACTGGT...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTTTGGCTGAGAAGACGTaGAGACAAGGTGAGGTAATG +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSLAEKT*RQGEVM
Trigger: CATTACCTCACCTTGTCTCCACGTCTTCTCAGCCAA...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTGTAGATAGAAGGCTCTaGACTCTGAGTGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSVDRRL*TLSANW
Trigger: CCAGTTTGCACTCAGAGTCCAGAGCCTTCTATCTAC...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGTTGCTGAGGATTTTCTaGTGCTTCTGCCATCTGTCC +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLLLRIF*CFCHLS
Trigger: GGACAGATGGCAGAAGCACCAGAAAATCCTCAGCAA...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTCACACAGGTGCACAGTaGAATGATGCAGAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALHTGAQ*NDAEGS
Trigger: GGAACCTTCTGCATCATTTCACTGTGCACCTGTGTG...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTTTCCCTTCCCACCTATaGAACATGGTCCAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFFPSHL*NMVQKF
Trigger: AAACTTTTGGACCATGTTTCATAGGTGGGAAGGGAA...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCAGACTGATAGTAAAATaGGATCGTCAAAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISRLIVK*DRQSGW
Trigger: CCACCCACTTTGACGATCTCATTTTACTATCAGTCT...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTGAAGGAAATAAAAGTTaGAATGGGCCCCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSEGNKS*NGPQAQ
Trigger: TTGAGCCTGGGGCCCATTGCAACTTTTATTTCCTTC...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTACTTTTAGGCCTCTTTaGTATCTCTGGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALTFRPL*YLWGLR
Trigger: CCTGAGCCCCCAGAGATAGCAAAGAGGCCTAAAAGT...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGCCTAATTTACCTCCATaGAGTAAGCACGCACTAGCA +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLPNLPP*SKHALA
Trigger: TGCTAGTGCGTGCTTACTGCATGGAGGTAAATTAGG...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGTCCCCAAATGCTCTCTaGTTCCTCAGTCCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLSPNAL*FLSPFK
Trigger: TTTGAAAGGACTGAGGAAGCAGAGAGCATTTGGGGA...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTAGTGAAGTCCCCAAATaGTCTCTGCTTCCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALSEVPK*SLLPQS
Trigger: GGACTGAGGAAGCAGAGAGCATTTGGGGACTTCACT...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGAACTCAACTCTACCTTaGCACTGGCATCGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLNSTLP*HWHRLD
Trigger: ATCAAGACGATGCCAGTGCCAAGGTAGAGTTGAGTT...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCCAGCTCCTTGAGACTTaGTCTCATCCTAAACTTGAA +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISQLLET*SHPKLE
Trigger: TTCAAGTTTAGGATGAGACCAAGTCTCAAGGAGCTG...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTAGTGTGCGGACCCTTTaGGAAGGGCGTTCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALSVRTL*EGRSFL
Trigger: AAGAAAAGAACGCCCTTCCCAAAGGGTCCGCACACT...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGTTAAGGAGCAACACCTaGTCCTTGGGAATGAAGTGT +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLLRSNT*SLGMKC
Trigger: ACACTTCATTCCCAAGGACCAGGTGTTGCTCCTTAA...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCACCAGTAGTCAGGTGTaGCTATTGAACACTGGAAAT +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISTSSQV*LLNTGN
Trigger: ATTTCCAGTGTTCAATAGCCACACCTGACTACTGGT...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
3UTR CAA 72 bp GAGGCATTGTTAGAATCCTGCAGTACACACCACTCCTaGTCTGACCAATCAGAAAGCACTATGCAAATTAAA +
Preference number: 4 (lower is better)
Translates to: EALLESCSTHHS*SDQSESTMQIK
Trigger: TTTAATTTGCATAGTGCTTTCTGATTGGTCAGACAAGGAGTGGTGTGTACTGCAGGATTCTAACAATGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGTTCCCTTCCCACCTATaGAACATGGTCCAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLFPSHL*NMVQKF
Trigger: AAACTTTTGGACCATGTTTCATAGGTGGGAAGGGAA...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTTTCTATAATGGGGAGTaGAGGTCTTGTTGGTTTATG +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFFYNGE*RSCWFM
Trigger: CATAAACCAACAAGACCTTCACTCCCCATTATAGAA...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTTGTGCAGGTGTGTACTaGCACAAACGTACACAAAAT +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSCAGVY*HKRTQN
Trigger: ATTTTGTGTACGTTTGTGTCAGTACACACCTGCACA...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCCTTGTCTATGTTAATTaGCCAAAGTTGATGCAGGAG +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISLVYVN*PKLMQE
Trigger: CTCCTGCATCAACTTTGGTCAATTAACATAGACAAG...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTTCCGGCATCTTATCATaGGTGTGGATGAATATTGAG +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSSGILS*VWMNIE
Trigger: CTCAATATTCATCCACACTCATGATAAGATGCCGGA...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTTCATTGGGGAAGTTTTaGGGTCATGACCATTTGGAT +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSSLGKF*GHDHLD
Trigger: ATCCAAATGGTCATGACCTCAAAACTTCCCCAATGA...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTTTTCTCTGGGGGACCTaGATGAAGAATAGAATCCTT +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSFLWGT*MKNRIL
Trigger: AAGGATTCTATTCTTCATTCAGGTCCCCCAGAGAAA...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTAACAAGGGGATTCTCTaGTACACAGTTGACCATGGC +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALNKGIL*YTVDHG
Trigger: GCCATGGTCAACTGTGTAGCAGAGAATCCCCTTGTT...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTTTAAGTGTGCTTAAGTaGGACAGGTCCAGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALLSVLK*DRSSPV
Trigger: AACAGGGCTGGACCTGTCGCACTTAAGCACACTTAA...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGCTTTGTCATGACCCTTaGCATGACCCTTCAAACATT +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLLCHDP*HDPSNI
Trigger: AATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAG...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTAGGATCCTTCTCTGCTaGCTTGCTGAGGATTTTCTG +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALRILLC*LAEDFL
Trigger: CAGAAAATCCTCAGCAAGGCAGCAGAGAAGGATCCT...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTACTCTACCTTGGCACTaGCATCGTCTTGATTTAGTT +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSTLPWH*HRLDLV
Trigger: AACTAAATCAAGACGATGCCAGTGCCAAGGTAGAGT...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTCACCATGGGTGGAAATaGGGAAGGAGTATGAGAATG +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALHHGWK*GRSMRM
Trigger: CATTCTCATACTCCTTCCCCATTTCCACCCATGGTG...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGAAAATACTAAGGCATTaGCCATGTGCCTTGGTTAAC +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLKILRH*PCALVN
Trigger: GTTAACCAAGGCACATGGTCAATGCCTTAGTATTTT...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTGAATTCATATGTTTTTaGCGAAGCTACTGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSEFICF*RSYWLQ
Trigger: CTGAAGCCAGTAGCTTCGTCAAAAACATATGAATTC...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTTGTTATACTGACCGTTaGAATGCTTTGAGAATACCC +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSCYTDR*NALRIP
Trigger: GGGTATTCTCAAAGCATTTCAACGGTCAGTATAACA...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCATTCAACCCCATTCATaGACATCAGATGTCATATCA +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISIQPHS*TSDVIS
Trigger: TGATATGACATCTGATGTGCATGAATGGGGTTGAAT...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCCAAACGTACACAAAATaGACCAGAGAGATACACATA +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISQTYTK*TREIHI
Trigger: TATGTGTATCTCTCTGGTGCATTTTGTGTACGTTTG...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTGTATTTATCTGGTCCTaGTATCAAAGAAGTCACTCA +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFVFIWS*YQRSHS
Trigger: TGAGTGACTTCTTTGATAGCAGGACCAGATAAATAC...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTTATTCCACCTCTGTTTaGGTGCTAGCCACTAAGACT +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALYSTSV*VLATKT
Trigger: AGTCTTAGTGGCTAGCACCCAAACAGAGGTGGAATA...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCGTGTTCGTATTTATCTaGTCCTGCTATCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISVFVFI*SCYQRS
Trigger: ACTTCTTTGATAGCAGGACCAGATAAATACGAACAC...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR TCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTAGACTGATAGTAAAATaGGATCGTCAAAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALRLIVK*DRQSGW
Trigger: CCACCCACTTTGACGATCTCATTTTACTATCAGTCT...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTATTCAACCCCATTCATaGACATCAGATGTCATATCA +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSIQPHS*TSDVIS
Trigger: TGATATGACATCTGATGTGCATGAATGGGGTTGAAT...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCCTCATATATGCTATTTaGCCCATATGGTTTACTCAT +
Preference number: 4 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISLIYAI*PIWFTH
Trigger: ATGAGTAAACCATATGGGGCAAATAGCATATATGAG...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTCTCATATATGCTATTTaGCCCATATGGTTTACTCAT +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFLIYAI*PIWFTH
Trigger: ATGAGTAAACCATATGGGGCAAATAGCATATATGAG...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTTGTTTGCCAAAGAGATaGCAGCTTCTTCGAACTACT +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALCLPKR*QLLRTT
Trigger: AGTAGTTCGAAGAAGCTGGCATCTCTTTGGCAAACA...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTCTTTGTCATGACCCTTaGCATGACCCTTCAAACATT +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALLCHDP*HDPSNI
Trigger: AATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAG...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTGATTTACCTAATCCCTaGTCCTCTTTCCTACTTCCT +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALDLPNP*SSFLLP
Trigger: AGGAAGTAGGAAAGAGGAGCAGGGATTAGGTAAATC...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTATGCCTCAGAGTGACTaGATTATGAAAAATCTTGTA +
Preference number: 4 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFMPQSD*IMKNLV
Trigger: TACAAGATTTTTCATAATCCAGTCACTCTGAGGCAT...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTATTGACCATGTGCCTTaGTTAACAGTTAACTGGTTT +
Preference number: 4 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSIDHVP*LTVNWF
Trigger: AAACCAGTTAACTGTTAACCAAGGCACATGGTCAAT...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTACCAGTAGTCAGGTGTaGCTATTGAACACTGGAAAT +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALTSSQV*LLNTGN
Trigger: ATTTCCAGTGTTCAATAGCCACACCTGACTACTGGT...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGAATAGTTTCAAGATCTaGTTTGAATCGCCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLNSFKI*FESPFL
Trigger: CAGGAAAGGCGATTCAAACCAGATCTTGAAACTATT...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGCACAAATCATTTCAGTaGAGAGCTGTAGTGAAATTT +
Preference number: 4 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLHKSFQ*RAVVKF
Trigger: AAATTTCACTACAGCTCTGCACTGAAATGATTTGTG...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR GCA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTCAAACGTACACAAAATaGACCAGAGAGATACACATA +
Preference number: 4 (lower is better)
Translates to: MVSHKLQSNSHIISLDALQTYTK*TREIHI
Trigger: TATGTGTATCTCTCTGGTGCATTTTGTGTACGTTTG...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS GCA 90 bp GGCTCATGGCGAACAGCTGCCGGCGATTCCGGGCCCGGAGGAGTTTaGCCTCCCAGCGGTCCAGGCGCGAGCGGCTCGCCCGGAGCGGCA +
Preference number: 5 (lower is better)
Translates to: GSWRTAAGDSGPGGV*PPSGPGASGSPGAA
Trigger: TGCCGCTCCGGGCGAGCCGCTCGCGCCTGGACCGCTGGGAGGGCAAACTCCTCCGGGCCCGGAATCGCCGGCAGCTGTTCGCCATGAGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563442.1
ENST00000565468.6
ENST00000610315.1
CDS GCA 90 bp TTGTACTGCCGGCTGCACTCGTCCGCGGGGCTCATGGCGAACAGCTaGCGGCGATTCCGGGCCCGGAGGAGTTTGCCCTCCCAGCGGTCC +
Preference number: 5 (lower is better)
Translates to: LYCRLHSSAGLMANS*RRFRARRSLPSQRS
Trigger: GGACCGCTGGGAGGGCAAACTCCTCCGGGCCCGGAATCGCCGGCAGCTGTTCGCCATGAGCCCCGCGGACGAGTGCAGCCGGCAGTACAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563442.1
ENST00000565468.6
ENST00000610315.1
CDS TCA 90 bp ACCTTCCGGCAGCCATGCCTCCGCTTGGCGGCTACACCATGGGCATaGTCCGCCGCAGCCTCGCCTTCCCTCGCCGCACCCGGAACAAAG +
Preference number: 5 (lower is better)
Translates to: TFRQPCLRLAATPWA*SAAASPSLAAPGTK
Trigger: CTTTGTTCCGGGTGCGGCGAGGGAAGGCGAGGCTGCGGCGGATCATGCCCATGGTGTAGCCGCCAAGCGGAGGCATGGCTGCCGGAAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS CCA 90 bp TGTTGGTGGAGTTGTACTGCCGGCTGCACTCGTCCGCGGGGCTCATaGCGAACAGCTGCCGGCGATTCCGGGCCCGGAGGAGTTTGCCCT +
Preference number: 5 (lower is better)
Translates to: CWWSCTAGCTRPRGS*RTAAGDSGPGGVCP
Trigger: AGGGCAAACTCCTCCGGGCCCGGAATCGCCGGCAGCTGTTCGCCATGAGCCCCGCGGACGAGTGCAGCCGGCAGTACAACTCCACCAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563442.1
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGCGGGCCCGGAGGAGTTaGCCCTCCCAGCGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGRARRS*PSQRSR
Trigger: CCTGGACCGCTGGGAGGGCAAACTCCTCCGGGCCCG...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTGCCTCTAATCATGGGTaGGGTCACTGGCCAAGCTCG +
Preference number: 5 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSASNHG*GHWPSS
Trigger: CGAGCTTGGCCAGTGACCCAACCCATGATTAGAGGC...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS GCA 90 bp ATGCAGAAGGTTCCTCCCATGAGGAAGAGCAGCCCTGCCACGTACTaGATAAGGCCTCGGTCCCAGCAGCAGCCCAGCACGCCGATGATC +
Preference number: 5 (lower is better)
Translates to: MQKVPPMRKSSPATY*IRPRSQQQPSTPMI
Trigger: GATCATCGGCGTGCTGGGCTGCTGCTGGGACCGAGGCCTTATGCAGTACGTGGCAGGGCTGCTCTTCCTCATGGGAGGAACCTTCTGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCCAGCCATGCCTCCGCTaGGCGGCTACACCATGGGCA +
Preference number: 5 (lower is better)
Translates to: ERLRHAHNTDALVQTERVQPCLR*AATPWA
Trigger: TGCCCATGGTGTAGCCGCCAAGCGGAGGCATGGCTG...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTGTAGGCAATGGTGGGTaGAGTCCCAGTCCAAGTAGA +
Preference number: 5 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSVGNGG*SPSPSR
Trigger: TCTACTTGGACTGGGACTCAACCCACCATTGCCTAC...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGCAGCCATGCCTCCGCTaGGCGGCTACACCATGGGCA +
Preference number: 5 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGQPCLR*AATPWA
Trigger: TGCCCATGGTGTAGCCGCCAAGCGGAGGCATGGCTG...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTACTCTCTGGCTGACTTaGCTTGCCAGCACCTGCAGT +
Preference number: 5 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSTLWLT*LASTCS
Trigger: ACTGCAGGTGCTGGCAAGCAAAGTCAGCCAGAGAGT...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTAGGCTCAAGGTTGACTaGCATGGAGCTCAAAGCACA +
Preference number: 5 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSRLKVD*HGAQST
Trigger: TGTGCTTTGAGCTCCATGCAAGTCAACCTTGAGCCT...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTCTAGATTTGGAGGAGTaGTCCAGTCTCTGTGACTCC +
Preference number: 5 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSLDLEE*SSLCDS
Trigger: GGAGTCACAGAGACTGGACAACTCCTCCAAATCTAG...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTCAGAGGAGAGGAAAGTaGGGATTGAAGGTGCCTCTA +
Preference number: 5 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSQRRGK*GLKVPL
Trigger: TAGAGGCACCTTCAATCCCAACTTTCCTCTCCTCTG...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTGAAGGTAAGACTGGGTaGTCTGAGCATCCACCGAAG +
Preference number: 5 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSEGKTG*SEHPPK
Trigger: CTTCGGTGGATGCTCAGACAACCCAGTCTTACCTTC...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGCAGGGCCCTGCACTCTaGCTGCCAGGAACACAGGGT +
Preference number: 5 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGQGPAL*LPGTQG
Trigger: ACCCTGTGTTCCTGGCAGCAAGAGTGCAGGGCCCTG...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTCATCTTCAGTCTTATTaGGTAGCAACCCTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSHLQSY*VATLGQ
Trigger: CTGGCCAAGGGTTGCTACCAAATAAGACTGAAGATG...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTGAGAATACCCAGGGGTaGGCTCCTTGCATTTTATTC +
Preference number: 5 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSENTQG*APCILF
Trigger: GAATAAAATGCAAGGAGCCAACCCCTGGGTATTCTC...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTAGTACACACCACTCCTaGTCTGACCAATCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSSTHHS*SDQSES
Trigger: GCTTTCTGATTGGTCAGACAAGGAGTGGTGTGTACT...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGCGGGTGTTGAAGGCCTaGCACCTGTCCCTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGRVLKA*HLSLCF
Trigger: GAAGCACAGGGACAGGTGCAAGGCCTTCAACACCCG...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGCCCATGTTGGTGGAGTaGTACTGCCGGCTGCACTCG +
Preference number: 5 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGPMLVE*YCRLHS
Trigger: CGAGTGCAGCCGGCAGTACAACTCCACCAACATGGG...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTCCCATGTTGGTGGAGTaGTACTGCCGGCTGCACTCG +
Preference number: 5 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGPMLVE*YCRLHS
Trigger: CGAGTGCAGCCGGCAGTACAACTCCACCAACATGGG...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGCTCCAGAGGCCCATGTaGGTGGAGTTGTACTGCCGG +
Preference number: 5 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGLQRPM*VELYCR
Trigger: CCGGCAGTACAACTCCACCAACATGGGCCTCTGGAG...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCGAAGCGTCCTTTCATaGATGCAGATCTTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSRSVLS*MQILPL
Trigger: GAGAGGCAAGATCTGCATCAATGAAAGGACGCTTCG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCGTGGCTGGGCGTCTTTaGCTTCCCAGCAGGATCAGA +
Preference number: 5 (lower is better)
Translates to: ERLRHAHNTDALVQTERVVAGRL*LPSRIR
Trigger: TCTGATCCTGCTGGGAAGCAAAAGACGCCCAGCCAC...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCAAGGAAGGGGGCTGCTaGGAGTCTAGGAGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: ERLRHAHNTDALVQTERVKEGGC*ESRSLS
Trigger: AGAGAGGCTCCTAGACTCCAAGCAGCCCCCTTCCTT...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCAGAGGAGAGGAAAGTaGGGATTGAAGGTGCCTCTA +
Preference number: 5 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSQRRGK*GLKVPL
Trigger: TAGAGGCACCTTCAATCCCAACTTTCCTCTCCTCTG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTCGTGACAGCTCAAAGTaGATCCCGGCCACACAGGTG +
Preference number: 5 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGRDSSK*IPATQV
Trigger: CACCTGTGTGGCCGGGATCAACTTTGAGCTGTCACG...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTTGGCGTCCTCTCCCGTaGACCCAGTGGGTGGCACTT +
Preference number: 5 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGWRPLP*TQWVAL
Trigger: AAGTGCCACCCACTGGGTCAACGGGAGAGGACGCCA...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTGCCCCTTCAGGACGCTaGGAAGGAAGACAAAAGGCC +
Preference number: 5 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGAPSGR*EGRQKA
Trigger: GGCCTTTTGTCTTCCTTCCAAGCGTCCTGAAGGGGC...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTATGCCAGTAAGAAGTTaGAACTTGACCTGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSMPVRS*NLTWGC
Trigger: GCAACCCCAGGTCAAGTTCAAACTTCTTACTGGCAT...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTAAACACTCCAGGCGTTaGAGAGTTTTGTCAGTTATG +
Preference number: 5 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSKHSRR*RVLSVM
Trigger: CATAACTGACAAAACTCTCAAACGCCTGGAGTGTTT...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTCTCCAGAGGCCCATGTaGGTGGAGTTGTACTGCCGG +
Preference number: 5 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGLQRPM*VELYCR
Trigger: CCGGCAGTACAACTCCACCAACATGGGCCTCTGGAG...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACTGGCGTCCTCTCCCGTaGACCCAGTGGGTGGCACTT +
Preference number: 5 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHWRPLP*TQWVAL
Trigger: AAGTGCCACCCACTGGGTCAACGGGAGAGGACGCCA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGGAACTTGACCTGGGGTaGCGGCTGGTGACTTTAGTG +
Preference number: 5 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGELDLG*RLVTLV
Trigger: CACTAAAGTCACCAGCCGCAACCCCAGGTCAAGTTC...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTGCCCCAGGCTCAAGGTaGACTTGCATGGAGCTCAAA +
Preference number: 5 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGAPGSR*TCMELK
Trigger: TTTGAGCTCCATGCAAGTCAACCTTGAGCCTGGGGC...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTAGGCTTGGAGGAGGATaGAAGCTGGAACAGGCACAG +
Preference number: 5 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGRLGGG*KLEQAQ
Trigger: CTGTGCCTGTTCCAGCTTCAATCCTCCTCCAAGCCT...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTAGTCTTTGTCTAGATTaGGAGGAGTTGTCCAGTCTC +
Preference number: 5 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSSLCLD*EELSSL
Trigger: GAGACTGGACAACTCCTCCAAATCTAGACAAAGACT...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTCCTTCCCCCAGATATTaGAAAAATCACTTAACACTC +
Preference number: 5 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSPSPRY*KNHLTL
Trigger: GAGTGTTAAGTGATTTTTCAAATATCTGGGGGAAGG...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTCTTTCAGAATCTGATTaGCTTCCACCCATTCCTTTT +
Preference number: 5 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSLSESD*LPPIPF
Trigger: AAAAGGAATGGGTGGAAGCAAATCAGATTCTGAAAG...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCTCCTTCTCTGCTGCCTaGCTGAGGATTTTCTGGTGC +
Preference number: 5 (lower is better)
Translates to: ERLRHAHNTDALVQTERVSFSAA*LRIFWC
Trigger: GCACCAGAAAATCCTCAGCAAGGCAGCAGAGAAGGA...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTAGAGGAAAGTTGGGATaGAAGGTGCCTCTAATCATG +
Preference number: 5 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSRGKLG*KVPLIM
Trigger: CATGATTAGAGGCACCTTCAATCCCAACTTTCCTCT...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCAAATCAGCTCATTTTaGCTCAGTAACACAGGGCTC +
Preference number: 5 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSQISSF*LSNTGL
Trigger: GAGCCCTGTGTTACTGAGCAAAAATGAGCTGATTTG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCACTCTCTGGCTGACTTaGCTTGCCAGCACCTGCAGT +
Preference number: 5 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQATLWLT*LASTCS
Trigger: ACTGCAGGTGCTGGCAAGCAAAGTCAGCCAGAGAGT...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGGTAAGAAGTTTGAACTaGACCTGGGGTTGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGVRSLN*TWGCGW
Trigger: CCAGCCGCAACCCCAGGTCAAGTTCAAACTTCTTAC...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTAAGGAAGGGGGCTGCTaGGAGTCTAGGAGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGKEGGC*ESRSLS
Trigger: AGAGAGGCTCCTAGACTCCAAGCAGCCCCCTTCCTT...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCCAGGAGAGGCAAGCATaGCTAGGTGGGACCACTCAT +
Preference number: 5 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAQERQA*LGGTTH
Trigger: ATGAGTGGTCCCACCTAGCAATGCTTGCCTCTCCTG...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TGGGGCAGCGCCGACACCCTCTGGGGGCAGATGGGACATGCAGTCCACAGGAGTGCTACATCATTGCATTaGTTTAATCTCAATCTCCCT +
Preference number: 5 (lower is better)
Translates to: WGSADTLWGQMGHAVHRSATSLH*FNLNLP
Trigger: AGGGAGATTGAGATTAAACAAATGCAATGATGTAGC...ACTCCTGTGGACTGCATGTCCCATCTGCCCCCAGAGGGTGTCGGCGCTGCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGCCCCTGATCCCCATTaGGCTGAGAAGACGTGGAGA +
Preference number: 5 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGAPDPH*AEKTWR
Trigger: TCTCCACGTCTTCTCAGCCAAATGGGGATCAGGGGC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTGCCTCTAATCATGGGTaGGGTCACTGGCCAAGCTCG +
Preference number: 5 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGASNHG*GHWPSS
Trigger: CGAGCTTGGCCAGTGACCCAACCCATGATTAGAGGC...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS TCA 90 bp GCCACTGAGACTCAGGTGCACTTACGTAGGGCATGCCACTCATCCTaGCGGATGGTCTTCGTGATATTGAAAGTGAGGTTCCTGGGGATG +
Preference number: 5 (lower is better)
Translates to: ATETQVHLRRACHSS*RMVFVILKVRFLGM
Trigger: CATCCCCAGGAACCTCACTTTCAATATCACGAAGACCATCCGTCAGGATGAGTGGCATGCCCTACGTAAGTGCACCTGAGTCTCAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563442.1
CDS-3UTR CAA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCCGGGTGTTGAAGGCCTaGCACCTGTCCCTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIRVLKA*HLSLCF
Trigger: GAAGCACAGGGACAGGTGCAAGGCCTTCAACACCCG...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACGCCCCTTCAGGACGCTaGGAAGGAAGACAAAAGGCC +
Preference number: 5 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHAPSGR*EGRQKA
Trigger: GGCCTTTTGTCTTCCTTCCAAGCGTCCTGAAGGGGC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCGGGTTCCACTTTGATTaGGAGTTAGCAGAGTCTGAC +
Preference number: 5 (lower is better)
Translates to: ERLRHAHNTDALVQTERVGFHFD*ELAESD
Trigger: GTCAGACTCTGCTAACTCCAAATCAAAGTGGAACCC...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGCTAGATTTGGAGGAGTaGTCCAGTCTCTGTGACTCC +
Preference number: 5 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGLDLEE*SSLCDS
Trigger: GGAGTCACAGAGACTGGACAACTCCTCCAAATCTAG...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTCGCTTAAGAAAGTCTTaGTCTAGATTTGGAGGAGTT +
Preference number: 5 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSRLRKS*SRFGGV
Trigger: AACTCCTCCAAATCTAGACAAAGACTTTCTTAAGCG...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCGCAACAAAGATGACCTaGCACTCTGGGTTATCCTTC +
Preference number: 5 (lower is better)
Translates to: ERLRHAHNTDALVQTERVATKMT*HSGLSF
Trigger: GAAGGATAACCCAGAGTGCAAGGTCATCTTTGTTGC...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTTTCAGGGTTACTGCTTaGAGGATCCTTCTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGFRVTA*RILLCC
Trigger: GCAGCAGAGAAGGATCCTCAAAGCAGTAACCCTGAA...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCTCGACCCGGCGGGTGTaGAAGGCCTTGCACCTGTCC +
Preference number: 5 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISSTRRV*KALHLS
Trigger: GGACAGGTGCAAGGCCTTCAACACCCGCCGGGTCGA...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTCGCAAGTGGTGGTGTTaGCTCTGTCTTCAAGAGACC +
Preference number: 5 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGRKWWC*LCLQET
Trigger: GGTCTCTTGAAGACAGAGCAAACACCACCACTTGCG...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCTCCACTCCTTGTGTGTaGCTGGTGGGCTGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLISTPCV*LVGWEG
Trigger: TCCTTCCCAGCCCACCAGCAACACACAAGGAGTGGA...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCTCATTGATGCAGATCTaGCCTCTCAGCATGTTCTCT +
Preference number: 5 (lower is better)
Translates to: ERLRHAHNTDALVQTERVSLMQI*PLSMFS
Trigger: AGAGAACATGCTGAGAGGCAAGATCTGCATCAATGA...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCCGAAGCGTCCTTTCATaGATGCAGATCTTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQARSVLS*MQILPL
Trigger: GAGAGGCAAGATCTGCATCAATGAAAGGACGCTTCG...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TCACTGGCCAAGCTCGACGTGCCTCCCCTCTCTGGGGCAGCTGGTCTTCTCAGTTTTATTTTTCATATTTaGATGCCAGGGAGCCACAGA +
Preference number: 5 (lower is better)
Translates to: SLAKLDVPPLSGAAGLLSFIFHI*MPGSHR
Trigger: TCTGTGGCTCCCTGGCATCAAAATATGAAAAATAAA...ACTGAGAAGACCAGCTGCCCCAGAGAGGGGAGGCACGTCGAGCTTGGCCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTAAGTGTGCGGACCCTTaGGGAAGGGCGTTCTTTTCT +
Preference number: 5 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGKCADP*GRAFFS
Trigger: AGAAAAGAACGCCCTTCCCAAAGGGTCCGCACACTT...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTATGGCTTCCCTTCCCTaGAAGGAAGTCTCACCCTCA +
Preference number: 5 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGMASLP*KEVSPS
Trigger: TGAGGGTGAGACTTCCTTCAAGGGAAGGGAAGCCAT...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCAGCAACACCTGGTCCTaGGGAATGAAGTGTAGGAGT +
Preference number: 5 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQASNTWS*GMKCRS
Trigger: ACTCCTACACTTCATTCCCAAGGACCAGGTGTTGCT...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTAGTCAGGTGTGGCTATaGAACACTGGAAATAGGGCT +
Preference number: 5 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGSQVWL*NTGNRA
Trigger: AGCCCTATTTCCAGTGTTCAATAGCCACACCTGACT...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGAGTCAGGTGTGGCTATaGAACACTGGAAATAGGGCT +
Preference number: 5 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGSQVWL*NTGNRA
Trigger: AGCCCTATTTCCAGTGTTCAATAGCCACACCTGACT...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTTCGACCCGGCGGGTGTaGAAGGCCTTGCACCTGTCC +
Preference number: 5 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSSTRRV*KALHLS
Trigger: GGACAGGTGCAAGGCCTTCAACACCCGCCGGGTCGA...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCTGTTGGTTTATGTTCTaGTACAACAGCAACCAGAGC +
Preference number: 5 (lower is better)
Translates to: ERLRHAHNTDALVQTERVCWFMF*YNSNQS
Trigger: GCTCTGGTTGCTGTTGTACAAGAACATAAACCAACA...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGTTGCATTTGCTGAGGTaGGTGTTTGCCAAAGAGATG +
Preference number: 5 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGLHLLR*VFAKEM
Trigger: CATCTCTTTGGCAAACACCAACCTCAGCAAATGCAA...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGCAAATCAGCTCATTTTaGCTCAGTAACACAGGGCTC +
Preference number: 5 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGQISSF*LSNTGL
Trigger: GAGCCCTGTGTTACTGAGCAAAAATGAGCTGATTTG...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCAGTACACACCACTCCTaGTCTGACCAATCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQASTHHS*SDQSES
Trigger: GCTTTCTGATTGGTCAGACAAGGAGTGGTGTGTACT...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGTGGGGAGTGAAGGTCTaGTTGGTTTATGTTCTTGTA +
Preference number: 5 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGWGVKV*LVYVLV
Trigger: TACAAGAACATAAACCAACAAGACCTTCACTCCCCA...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGCCCATTGGCCAGGACTaGCCGTCTGAAAGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLPIGQD*PSERGL
Trigger: GAGGCCCCTTTCAGACGGCAAGTCCTGGCCAATGGG...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TCCTTCAGCAGCGAGGCACAGACACTTGATGTGAGAATTCCATTCCAGCGGGGGACTTTAGTGAGGTCATaGACCCTAAATGCCCTCATA +
Preference number: 5 (lower is better)
Translates to: SFSSEAQTLDVRIPFQRGTLVRS*TLNALI
Trigger: TATGAGGGCATTTAGGGTCAATGACCTCACTAAAGT...CCCCCGCTGGAATGGAATTCTCACATCAAGTGTCTGTGCCTCGCTGCTGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCGTAAGAAGTTTGAACTaGACCTGGGGTTGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIVRSLN*TWGCGW
Trigger: CCAGCCGCAACCCCAGGTCAAGTTCAAACTTCTTAC...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCGGATATCCTACCCTCTaGTCACAGGAGAGGCAAGCA +
Preference number: 5 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIGYPTL*SQERQA
Trigger: TGCTTGCCTCTCCTGTGACAAGAGGGTAGGATATCC...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCTTCATTATTCTGAATTaGACCCAGGTGGGCATCTTT +
Preference number: 5 (lower is better)
Translates to: ERLRHAHNTDALVQTERVFIILN*TQVGIF
Trigger: AAAGATGCCCACCTGGGTCAAATTCAGAATAATGAA...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACACACAGCCCCAGACATaGAGAGCTTTGAGAGACAGA +
Preference number: 5 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHTQPQT*RALRDR
Trigger: TCTGTCTCTCAAAGCTCTCAATGTCTGGGGCTGTGT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACGAAGATCCCAGCTCCTaGAGACTTGGTCTCATCCTA +
Preference number: 5 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHEDPSS*RLGLIL
Trigger: TAGGATGAGACCAAGTCTCAAGGAGCTGGGATCTTC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCCCCTCACAAGGACACTaGATCCGCTGCAAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIPSQGH*IRCKAE
Trigger: TTCTGCTTTGCAGCGGATCAAGTGTCCTTGTGAGGG...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACAGCAACACCTGGTCCTaGGGAATGAAGTGTAGGAGT +
Preference number: 5 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHSNTWS*GMKCRS
Trigger: ACTCCTACACTTCATTCCCAAGGACCAGGTGTTGCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTATGGGTGACCCGGAAAGGAAAGGAAAAGCTCAGCCAGTGGGAGGAATGGGGTATACAACGCAAAGTCTaGGTCACGTTAAAAGTGAGG +
Preference number: 5 (lower is better)
Translates to: LWVTRKGKEKLSQWEEWGIQRKV*VTLKVR
Trigger: CCTCACTTTTAACGTGACCAAGACTTTGCGTTGTAT...ACCCCATTCCTCCCACTGGCTGAGCTTTTCCTTTCCTTTCCGGGTCACCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610315.1
CDS-3UTR CAA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTTCCACTCCTTGTGTGTaGCTGGTGGGCTGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFSTPCV*LVGWEG
Trigger: TCCTTCCCAGCCCACCAGCAACACACAAGGAGTGGA...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTTCATTGATGCAGATCTaGCCTCTCAGCATGTTCTCT +
Preference number: 5 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGSLMQI*PLSMFS
Trigger: AGAGAACATGCTGAGAGGCAAGATCTGCATCAATGA...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCTGGGGAGTGAAGGTCTaGTTGGTTTATGTTCTTGTA +
Preference number: 5 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAWGVKV*LVYVLV
Trigger: TACAAGAACATAAACCAACAAGACCTTCACTCCCCA...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GAAAGGCTTCGTCACGCTCACAACACAGACGCACTGGTACAGACGGAGAGGGTCACTAAGACTGTTATTTaGGGATTCATGGCCTTGAAT +
Preference number: 5 (lower is better)
Translates to: ERLRHAHNTDALVQTERVTKTVI*GFMALN
Trigger: ATTCAAGGCCATGAATCCCAAAATAACAGTCTTAGT...GACCCTCTCCGTCTGTACCAGTGCGTCTGTGTTGTGAGCGTGACGAAGCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCCCCGGTAAGGAAGTCTaGAGTAGGGCACCCACACCT +
Preference number: 5 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISPGKEV*SRAPTP
Trigger: AGGTGTGGGTGCCCTACTCAAGACTTCCTTACCGGG...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACATGCCAGTAAGAAGTTaGAACTTGACCTGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHMPVRS*NLTWGC
Trigger: GCAACCCCAGGTCAAGTTCAAACTTCTTACTGGCAT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTAGTCTTTGTCTAGATTaGGAGGAGTTGTCCAGTCTC +
Preference number: 5 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGSLCLD*EELSSL
Trigger: GAGACTGGACAACTCCTCCAAATCTAGACAAAGACT...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp AGCTGGTTCCATCACTGTGACCCAGCAGAGGAGAGGAAAGTTGGGATTGAAGGTAGAGGAAAGTTGGGATaGAAGGTGCCTCTAATCATG +
Preference number: 5 (lower is better)
Translates to: SWFHHCDPAEERKVGIEGRGKLG*KVPLIM
Trigger: CATGATTAGAGGCACCTTCAATCCCAACTTTCCTCT...ACCTTCAATCCCAACTTTCCTCTCCTCTGCTGGGTCACAGTGATGGAACCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACGAGAATACCCAGGGGTaGGCTCCTTGCATTTTATTC +
Preference number: 5 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHENTQG*APCILF
Trigger: GAATAAAATGCAAGGAGCCAACCCCTGGGTATTCTC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCAAACACTCCAGGCGTTaGAGAGTTTTGTCAGTTATG +
Preference number: 5 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAKHSRR*RVLSVM
Trigger: CATAACTGACAAAACTCTCAAACGCCTGGAGTGTTT...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTCTCACTCAGAAACATCGTATTTCCCTGGAAAGGGCTGGCTGTGTCCCCTGGGGTTTCAAGATCTGGTTaGAATCGCCTTTCCTGTAAT +
Preference number: 5 (lower is better)
Translates to: LSLRNIVFPWKGLAVSPGVSRSG*NRLSCN
Trigger: ATTACAGGAAAGGCGATTCAAACCAGATCTTGAAAC...CCCAGGGGACACAGCCAGCCCTTTCCAGGGAAATACGATGTTTCTGAGTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTCGTGACAGCTCAAAGTaGATCCCGGCCACACAGGTG +
Preference number: 5 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSRDSSK*IPATQV
Trigger: CACCTGTGTGGCCGGGATCAACTTTGAGCTGTCACG...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCTCTGGCCCAGTGGCTTaGTTCTTGGTTCTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISSGPVA*FLVLPS
Trigger: AGAGGGCAGAACCAAGAACAAAGCCACTGGGCCAGA...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCGGAGTGAAGGTCTTGTaGGTTTATGTTCTTGTACAA +
Preference number: 5 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAGVKVL*VYVLVQ
Trigger: TTGTACAAGAACATAAACCAACAAGACCTTCACTCC...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTGTGGCTGGGCGTCTTTaGCTTCCCAGCAGGATCAGA +
Preference number: 5 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSVAGRL*LPSRIR
Trigger: TCTGATCCTGCTGGGAAGCAAAAGACGCCCAGCCAC...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTCAGGAGAGGCAAGCATaGCTAGGTGGGACCACTCAT +
Preference number: 5 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFQERQA*LGGTTH
Trigger: ATGAGTGGTCCCACCTAGCAATGCTTGCCTCTCCTG...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCTTCATTATTCTGAATTaGACCCAGGTGGGCATCTTT +
Preference number: 5 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAFIILN*TQVGIF
Trigger: AAAGATGCCCACCTGGGTCAAATTCAGAATAATGAA...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCCCTTCCCCCAGATATTaGAAAAATCACTTAACACTC +
Preference number: 5 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQAPSPRY*KNHLTL
Trigger: GAGTGTTAAGTGATTTTTCAAATATCTGGGGGAAGG...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTCAGGGCCCTGCACTCTaGCTGCCAGGAACACAGGGT +
Preference number: 5 (lower is better)
Translates to: MVSHKLQSNSHIISLDALQGPAL*LPGTQG
Trigger: ACCCTGTGTTCCTGGCAGCAAGAGTGCAGGGCCCTG...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTGCCCCTGATCCCCATTaGGCTGAGAAGACGTGGAGA +
Preference number: 5 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSAPDPH*AEKTWR
Trigger: TCTCCACGTCTTCTCAGCCAAATGGGGATCAGGGGC...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCAGGCGTTTGAGAGTTTaGTCAGTTATGGTCCCTGTC +
Preference number: 5 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIRRLRV*SVMVPV
Trigger: GACAGGGACCATAACTGACAAAACTCTCAAACGCCT...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTGGTTCCTGGGGATGGTaGCTGAGGAGTAGTGGTATT +
Preference number: 5 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFGSWGW*LRSSGI
Trigger: AATACCACTACTCCTCAGCAACCATCCCCAGGAACC...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACAACGTCCTTCTCAGTTaGTTTTCTCTTCCACTCCTT +
Preference number: 5 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHNVLLS*FSLPLL
Trigger: AAGGAGTGGAAGAGAAAACAAACTGAGAAGGACGTT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCGAAGGTAAGACTGGGTaGTCTGAGCATCCACCGAAG +
Preference number: 5 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISEGKTG*SEHPPK
Trigger: CTTCGGTGGATGCTCAGACAACCCAGTCTTACCTTC...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTTCTGGCCCAGTGGCTTaGTTCTTGGTTCTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSSGPVA*FLVLPS
Trigger: AGAGGGCAGAACCAAGAACAAAGCCACTGGGCCAGA...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GTCTTATTTGGTAGCAACCCTTGGCCAGACTCCCTGCTTCTGACACTGCAAGCCTGTTTGCAAATCACTTaGCAATTTCTTTGTCACCCT +
Preference number: 5 (lower is better)
Translates to: VLFGSNPWPDSLLLTLQACLQIT*QFLCHP
Trigger: AGGGTGACAAAGAAATTGCAAAGTGATTTGCAAACA...GGCTTGCAGTGTCAGAAGCAGGGAGTCTGGCCAAGGGTTGCTACCAAATAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTTCCTTCTCTGCTGCCTaGCTGAGGATTTTCTGGTGC +
Preference number: 5 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFSFSAA*LRIFWC
Trigger: GCACCAGAAAATCCTCAGCAAGGCAGCAGAGAAGGA...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTGTAGGCAATGGTGGGTaGAGTCCCAGTCCAAGTAGA +
Preference number: 5 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFVGNGG*SPSPSR
Trigger: TCTACTTGGACTGGGACTCAACCCACCATTGCCTAC...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS TCA 90 bp GATGGTCTTCGTGATATTGAAAGTGAGGTTCCTGGGGATGGTTGCTaGGGAGTAGTGGTATTTGATGTACGTACATCGCTCAATTTCTCC +
Preference number: 5 (lower is better)
Translates to: DGLRDIESEVPGDGC*GVVVFDVRTSLNFS
Trigger: GGAGAAATTGAGCGATGTACGTACATCAAATACCACTACTCCTCAGCAACCATCCCCAGGAACCTCACTTTCAATATCACGAAGACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563442.1
ENST00000565468.6
CDS TCA 90 bp CAAAGTCTTGGTCACGTTAAAAGTGAGGTTCCTGGGGATGGTTGCTaGGGAGTAGTGGTATTTGATGTACGTACATCGCTCAATTTCTCC +
Preference number: 5 (lower is better)
Translates to: QSLGHVKSEVPGDGC*GVVVFDVRTSLNFS
Trigger: GGAGAAATTGAGCGATGTACGTACATCAAATACCACTACTCCTCAGCAACCATCCCCAGGAACCTCACTTTTAACGTGACCAAGACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610315.1
CDS-3UTR CAA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTGGTTCCTGGGGATGGTaGCTGAGGAGTAGTGGTATT +
Preference number: 5 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSGSWGW*LRSSGI
Trigger: AATACCACTACTCCTCAGCAACCATCCCCAGGAACC...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTCCCGGTAAGGAAGTCTaGAGTAGGGCACCCACACCT +
Preference number: 5 (lower is better)
Translates to: MVSHKLQSNSHIISLDALPGKEV*SRAPTP
Trigger: AGGTGTGGGTGCCCTACTCAAGACTTCCTTACCGGG...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCAGCTTCCGTAACTGGTaGGAGTCACATGTTTTAATC +
Preference number: 5 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLISFRNW*ESHVLI
Trigger: GATTAAAACATGTGACTCCAACCAGTTACGGAAGCT...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGGGATATCCTACCCTCTaGTCACAGGAGAGGCAAGCA +
Preference number: 5 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLGYPTL*SQERQA
Trigger: TGCTTGCCTCTCCTGTGACAAGAGGGTAGGATATCC...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTACACAGCCCCAGACATaGAGAGCTTTGAGAGACAGA +
Preference number: 5 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFTQPQT*RALRDR
Trigger: TCTGTCTCTCAAAGCTCTCAATGTCTGGGGCTGTGT...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTGAAGATCCCAGCTCCTaGAGACTTGGTCTCATCCTA +
Preference number: 5 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFEDPSS*RLGLIL
Trigger: TAGGATGAGACCAAGTCTCAAGGAGCTGGGATCTTC...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGAAGTGTGCGGACCCTTaGGGAAGGGCGTTCTTTTCT +
Preference number: 5 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLKCADP*GRAFFS
Trigger: AGAAAAGAACGCCCTTCCCAAAGGGTCCGCACACTT...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGATGGCTTCCCTTCCCTaGAAGGAAGTCTCACCCTCA +
Preference number: 5 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLMASLP*KEVSPS
Trigger: TGAGGGTGAGACTTCCTTCAAGGGAAGGGAAGCCAT...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTCCAAGGGCAGAGGCATaGTTAGAATCCTGCAGTACA +
Preference number: 5 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFPRAEA*LESCST
Trigger: TGTACTGCAGGATTCTAACAATGCCTCTGCCCTTGG...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGTTCTCTGCTACACAGTaGACCATGGCTACACCAGCT +
Preference number: 5 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLFSATQ*TMATPA
Trigger: AGCTGGTGTAGCCATGGTCAACTGTGTAGCAGAGAA...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTGAACTTGACCTGGGGTaGCGGCTGGTGACTTTAGTG +
Preference number: 5 (lower is better)
Translates to: MVSHKLQSNSHIISLDALELDLG*RLVTLV
Trigger: CACTAAAGTCACCAGCCGCAACCCCAGGTCAAGTTC...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGAGGCTCAAGGTTGACTaGCATGGAGCTCAAAGCACA +
Preference number: 5 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLRLKVD*HGAQST
Trigger: TGTGCTTTGAGCTCCATGCAAGTCAACCTTGAGCCT...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GCTCAAGAAACATCCACCACACACACACACACACACACACACACACACACACACTGTTTGCAAATCACTTaGCAATTTCTTTGTCACCCT +
Preference number: 5 (lower is better)
Translates to: AQETSTTHTHTHTHTHTHCLQIT*QFLCHP
Trigger: AGGGTGACAAAGAAATTGCAAAGTGATTTGCAAACA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGATGTTTCTTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCGCAACAAAGATGACCTaGCACTCTGGGTTATCCTTC +
Preference number: 5 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISATKMT*HSGLSF
Trigger: GAAGGATAACCCAGAGTGCAAGGTCATCTTTGTTGC...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCCATCTTCAGTCTTATTaGGTAGCAACCCTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISHLQSY*VATLGQ
Trigger: CTGGCCAAGGGTTGCTACCAAATAAGACTGAAGATG...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCGTTTCAAGATCTGGTTaGAATCGCCTTTCCTGTAAT +
Preference number: 5 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLIVSRSG*NRLSCN
Trigger: ATTACAGGAAAGGCGATTCAAACCAGATCTTGAAAC...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTCGCAAGTGGTGGTGTTaGCTCTGTCTTCAAGAGACC +
Preference number: 5 (lower is better)
Translates to: MVSHKLQSNSHIISLDALRKWWC*LCLQET
Trigger: GGTCTCTTGAAGACAGAGCAAACACCACCACTTGCG...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp GGTCTTCTCAGTCCTGCAGGGAGACAGCTGTTTATGCTGCAGATTTACCTAATCACTAAGACTGTTATTTaGGGATTCATGGCCTTGAAT +
Preference number: 5 (lower is better)
Translates to: GLLSPAGRQLFMLQIYLITKTVI*GFMALN
Trigger: ATTCAAGGCCATGAATCCCAAAATAACAGTCTTAGT...GATTAGGTAAATCTGCAGCATAAACAGCTGTCTCCCTGCAGGACTGAGAAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTAGGCGTTTGAGAGTTTaGTCAGTTATGGTCCCTGTC +
Preference number: 5 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSRRLRV*SVMVPV
Trigger: GACAGGGACCATAACTGACAAAACTCTCAAACGCCT...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTAACGTCCTTCTCAGTTaGTTTTCTCTTCCACTCCTT +
Preference number: 5 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFNVLLS*FSLPLL
Trigger: AAGGAGTGGAAGAGAAAACAAACTGAGAAGGACGTT...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTCAATATCATACAAACTaGAGCCCATGGGAAATGGAG +
Preference number: 5 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFQYHTN*SPWEME
Trigger: CTCCATTTCCCATGGGCTCAAGTTTGTATGATATTG...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CAGGTCTTTGTCATGACCCTTGCCATGACCCTTCAAACATTGCTGATTTACTTTAGCTTCCGTAACTGGTaGGAGTCACATGTTTTAATC +
Preference number: 5 (lower is better)
Translates to: QVFVMTLAMTLQTLLIYFSFRNW*ESHVLI
Trigger: GATTAAAACATGTGACTCCAACCAGTTACGGAAGCT...AAAGTAAATCAGCAATGTTTGAAGGGTCATGGCAAGGGTCATGACAAAGACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTAATGCCCTCATAAGGTaGGGTTCCACTTTGATTTGG +
Preference number: 5 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSNALIR*GSTLIW
Trigger: CCAAATCAAAGTGGAACCCAACCTTATGAGGGCATT...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTTTCAGGGTTACTGCTTaGAGGATCCTTCTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: MVSHKLQSNSHIISLDALFRVTA*RILLCC
Trigger: GCAGCAGAGAAGGATCCTCAAAGCAGTAACCCTGAA...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTACTTTAGTGAGGTCATaGACCCTAAATGCCCTCATA +
Preference number: 5 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSTLVRS*TLNALI
Trigger: TATGAGGGCATTTAGGGTCAATGACCTCACTAAAGT...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCCGCTTAAGAAAGTCTTaGTCTAGATTTGGAGGAGTT +
Preference number: 5 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISRLRKS*SRFGGV
Trigger: AACTCCTCCAAATCTAGACAAAGACTTTCTTAAGCG...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CAGAGAGATCCACATTCAACCCCATTCATGCACATCAGATGTCATATCATATCCGCTCATATATGCTATTaGCCCCATATGGTTTACTCA +
Preference number: 5 (lower is better)
Translates to: QRDPHSTPFMHIRCHIISAHICY*PHMVYS
Trigger: TGAGTAAACCATATGGGGCAAATAGCATATATGAGC...GGATATGATATGACATCTGATGTGCATGAATGGGGTTGAATGTGGATCTCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTGCTCATATATGCTATTaGCCCCATATGGTTTACTCA +
Preference number: 5 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSAHICY*PHMVYS
Trigger: TGAGTAAACCATATGGGGCAAATAGCATATATGAGC...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTCTTTCAGAATCTGATTaGCTTCCACCCATTCCTTTT +
Preference number: 5 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSLSESD*LPPIPF
Trigger: AAAAGGAATGGGTGGAAGCAAATCAGATTCTGAAAG...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTTGTTGGTTTATGTTCTaGTACAACAGCAACCAGAGC +
Preference number: 5 (lower is better)
Translates to: MVSHKLQSNSHIISLDALCWFMF*YNSNQS
Trigger: GCTCTGGTTGCTGTTGTACAAGAACATAAACCAACA...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp ATGGTGAGTCATAAATTACAAAGCAATTCACACATCATCTCCTTGGATGCTCTTCAATATCATACAAACTaGAGCCCATGGGAAATGGAG +
Preference number: 5 (lower is better)
Translates to: MVSHKLQSNSHIISLDALQYHTN*SPWEME
Trigger: CTCCATTTCCCATGGGCTCAAGTTTGTATGATATTG...AAGAGCATCCAAGGAGATGATGTGTGAATTGCTTTGTAATTTATGACTCACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGTTTATTTTTCATATTTaGATGCCAGGGAGCCACAGA +
Preference number: 5 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLFIFHI*MPGSHR
Trigger: TCTGTGGCTCCCTGGCATCAAAATATGAAAAATAAA...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp TTGGTTTATGTTCTTGTACAACAGCAACCAGAGCAACATTTCTTCTCTCTCCTGACATCTATGATTAGATaGAGATGGCAACTGACCAAA +
Preference number: 5 (lower is better)
Translates to: LVYVLVQQQPEQHFFSLLTSMIR*RWQLTK
Trigger: TTTGGTCAGTTGCCATCTCAATCTAATCATAGATGT...CAGGAGAGAGAAGAAATGTTGCTCTGGTTGCTGTTGTACAAGAACATAAACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS-3UTR CAA 90 bp CTAAATCAAGACAGCTACACACAGTGCATTCATTTCCGGCATCTTATCATGAGTGCTACATCATTGCATTaGTTTAATCTCAATCTCCCT +
Preference number: 5 (lower is better)
Translates to: LNQDSYTQCIHFRHLIMSATSLH*FNLNLP
Trigger: AGGGAGATTGAGATTAAACAAATGCAATGATGTAGC...ACTCATGATAAGATGCCGGAAATGAATGCACTGTGTGTAGCTGTCTTGATTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS CAA 90 bp GGGCTCATGGCGAACAGCTGCCGGCGATTCCGGGCCCGGAGGAGTTaGCCCTCCCAGCGGTCCAGGCGCGAGCGGCTCGCCCGGAGCGGC +
Preference number: 6 (lower is better)
Translates to: GLMANSCRRFRARRS*PSQRSRRERLARSG
Trigger: GCCGCTCCGGGCGAGCCGCTCGCGCCTGGACCGCTGGGAGGGCAAACTCCTCCGGGCCCGGAATCGCCGGCAGCTGTTCGCCATGAGCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563442.1
ENST00000565468.6
ENST00000610315.1
CDS GCA 72 bp CGAACAGCTGCCGGCGATTCCGGGCCCGGAGGAGTTTaGCCTCCCAGCGGTCCAGGCGCGAGCGGCTCGCCC +
Preference number: 6 (lower is better)
Translates to: RTAAGDSGPGGV*PPSGPGASGSP
Trigger: GGGCGAGCCGCTCGCGCCTGGACCGCTGGGAGGGCAAACTCCTCCGGGCCCGGAATCGCCGGCAGCTGTTCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563442.1
ENST00000565468.6
ENST00000610315.1
CDS CAA 72 bp GCGAACAGCTGCCGGCGATTCCGGGCCCGGAGGAGTTaGCCCTCCCAGCGGTCCAGGCGCGAGCGGCTCGCC +
Preference number: 6 (lower is better)
Translates to: ANSCRRFRARRS*PSQRSRRERLA
Trigger: GGCGAGCCGCTCGCGCCTGGACCGCTGGGAGGGCAAACTCCTCCGGGCCCGGAATCGCCGGCAGCTGTTCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563442.1
ENST00000565468.6
ENST00000610315.1
CDS GCA 72 bp CGGCTGCACTCGTCCGCGGGGCTCATGGCGAACAGCTaGCGGCGATTCCGGGCCCGGAGGAGTTTGCCCTCC +
Preference number: 6 (lower is better)
Translates to: RLHSSAGLMANS*RRFRARRSLPS
Trigger: GGAGGGCAAACTCCTCCGGGCCCGGAATCGCCGGCAGCTGTTCGCCATGAGCCCCGCGGACGAGTGCAGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563442.1
ENST00000565468.6
ENST00000610315.1
CDS TCA 72 bp CAGCCATGCCTCCGCTTGGCGGCTACACCATGGGCATaGTCCGCCGCAGCCTCGCCTTCCCTCGCCGCACCC +
Preference number: 6 (lower is better)
Translates to: QPCLRLAATPWA*SAAASPSLAAP
Trigger: GGGTGCGGCGAGGGAAGGCGAGGCTGCGGCGGATCATGCCCATGGTGTAGCCGCCAAGCGGAGGCATGGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS CCA 72 bp AGTTGTACTGCCGGCTGCACTCGTCCGCGGGGCTCATaGCGAACAGCTGCCGGCGATTCCGGGCCCGGAGGA +
Preference number: 6 (lower is better)
Translates to: SCTAGCTRPRGS*RTAAGDSGPGG
Trigger: TCCTCCGGGCCCGGAATCGCCGGCAGCTGTTCGCCATGAGCCCCGCGGACGAGTGCAGCCGGCAGTACAACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563442.1
ENST00000565468.6
ENST00000610315.1
CDS GCA 72 bp TCCAGAGGCCCATGTTGGTGGAGTTGTACTGCCGGCTaGACTCGTCCGCGGGGCTCATGGCGAACAGCTGCC +
Preference number: 6 (lower is better)
Translates to: SRGPCWWSCTAG*TRPRGSWRTAA
Trigger: GGCAGCTGTTCGCCATGAGCCCCGCGGACGAGTGCAGCCGGCAGTACAACTCCACCAACATGGGCCTCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563442.1
ENST00000565468.6
ENST00000610315.1
CDS TCA 72 bp GTCATCAGGGAGTCCGTACAGGTAGCGTGGGTAGCGTaGCAGCTCAAAGTTGATCCCGGCCACACAGGTGCA +
Preference number: 6 (lower is better)
Translates to: VIRESVQVAWVA*QLKVDPGHTGA
Trigger: TGCACCTGTGTGGCCGGGATCAACTTTGAGCTGTCACGCTACCCACGCTACCTGTACGGACTCCCTGATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS TCA 72 bp CCCATGCACAGAACATGGACCAGCCATAGCCATGGCTaGTGTCATCAGGGAGTCCGTACAGGTAGCGTGGGT +
Preference number: 6 (lower is better)
Translates to: PMHRTWTSHSHG*CHQGVRTGSVG
Trigger: ACCCACGCTACCTGTACGGACTCCCTGATGACATCAGCCATGGCTATGGCTGGTCCATGTTCTGTGCATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565468.6
ENST00000610315.1
CDS TCA 72 bp GTCATTCTGCGCAGGTGTAGGGCATGCCACTCATCCTaGCGGATGGTCTTCGTGATATTGAAAGTGAGGTTC +
Preference number: 6 (lower is better)
Translates to: VILRRCRACHSS*RMVFVILKVRF
Trigger: GAACCTCACTTTCAATATCACGAAGACCATCCGTCAGGATGAGTGGCATGCCCTACACCTGCGCAGAATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565468.6
CDS TCA 72 bp ACTCAGGTGCACTTACGTAGGGCATGCCACTCATCCTaGCGGATGGTCTTCGTGATATTGAAAGTGAGGTTC +
Preference number: 6 (lower is better)
Translates to: TQVHLRRACHSS*RMVFVILKVRF
Trigger: GAACCTCACTTTCAATATCACGAAGACCATCCGTCAGGATGAGTGGCATGCCCTACGTAAGTGCACCTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563442.1
CDS TCA 72 bp GGTTCCTGGGGATGGTTGCTGAGGAGTAGTGGTATTTaGTGTACGTACATCGCTCAATTTCTCCTTTCCGAA +
Preference number: 6 (lower is better)
Translates to: GSWGWLLRSSGI*CTYIAQFLLSE
Trigger: TTCGGAAAGGAGAAATTGAGCGATGTACGTACATCAAATACCACTACTCCTCAGCAACCATCCCCAGGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563442.1
ENST00000565468.6
ENST00000610315.1