RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM177 (Homo sapiens)

Ensembl gene IDs: ENSG00000144120

Ensembl transcript IDs: ENST00000272521.7, ENST00000401466.5, ENST00000409951.1, ENST00000424086.5, ENST00000445518.1

Found 282 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGCCCTTCCGTCCTGTTCCCCCTGCTGCACTAAACATGGTAGGCTaGTTGTCCCTTTCTCTTCAGTTAGCTGGAGGGGTCTCCTCGGAA +
Preference number: 1 (lower is better)
Translates to: LPFRPVPPAALNMVG*LSLSLQLAGGVSSE
Trigger: TTCCGAGGAGACCCCTCCAGCTAACTGAAGAGAAAGGGACAACCAGCCTACCATGTTTAGTGCAGCAGGGGGAACAGGACGGAAGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409951.1
3UTR CCA 90 bp GTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCAATaGCAGGGTGGTGTCTGCACAAGCTGGAAGTGTCCTTGTGATGAG +
Preference number: 1 (lower is better)
Translates to: VSYRSKGSNRALQTQ*QGGVCTSWKCPCDE
Trigger: CTCATCACAAGGACACTTCCAGCTTGTGCAGACACCACCCTGCCATTGAGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
3UTR TCA 90 bp TCTGTTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATaGCCTTACCCAACTCTACAATCTTGCAAGGCGGTTTACATCATC +
Preference number: 1 (lower is better)
Translates to: SVYLQCTLCARPLCS*PYPTLQSCKAVYII
Trigger: GATGATGTAAACCGCCTTGCAAGATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
3UTR CAA 90 bp CCCTTCCGTCCTGTTCCCCCTGCTGCACTAAACATGGTAGGCTGGTaGTCCCTTTCTCTTCAGTTAGCTGGAGGGGTCTCCTCGGAAGTT +
Preference number: 2 (lower is better)
Translates to: PFRPVPPAALNMVGW*SLSLQLAGGVSSEV
Trigger: AACTTCCGAGGAGACCCCTCCAGCTAACTGAAGAGAAAGGGACAACCAGCCTACCATGTTTAGTGCAGCAGGGGGAACAGGACGGAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409951.1
3UTR-3UTR TCA 90 bp TTCCTCAGCTGGTGCCTCCTAGAGCTCCATGACACCCTGCCCTTCCGTCCTGTTACTTCTAACCCAGCATaGGGAAAAGGGCTATGGAGT +
Preference number: 2 (lower is better)
Translates to: FLSWCLLELHDTLPFRPVTSNPA*GKGLWS
Trigger: ACTCCATAGCCCTTTTCCTCATGCTGGGTTAGAAGT...AACAGGACGGAAGGGCAGGGTGTCATGGAGCTCTAGGAGGCACCAGCTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
3UTR-3UTR CCA 90 bp CCAAAGCCAGTGATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCAATaGCAGGGTGGTGTCTGCACA +
Preference number: 2 (lower is better)
Translates to: PKPVIFLAVSYRSKGSNRALQTQ*QGGVCT
Trigger: TGTGCAGACACCACCCTGCCATTGAGTCTGGAGGGC...CCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAATCACTGGCTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
3UTR-3UTR GCA 90 bp CCAAAGCCAGTGATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGTGGCAGGGTGGTGTCTaGACAAGCTGGAAGTGTCCT +
Preference number: 2 (lower is better)
Translates to: PKPVIFLAVSYRSKGSNRWQGGV*TSWKCP
Trigger: AGGACACTTCCAGCTTGTGCAGACACCACCCTGCCA...CCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAATCACTGGCTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
3UTR-3UTR CCA 90 bp CCAAAGCCAGTGATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGACTCAATGGCAGGGTaGTGTCTGCACAAGCTGGAA +
Preference number: 2 (lower is better)
Translates to: PKPVIFLAVSYRSKGSNRDSMAG*CLHKLE
Trigger: TTCCAGCTTGTGCAGACACCACCCTGCCATTGAGTC...CCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAATCACTGGCTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
3UTR-3UTR GCA 90 bp GGAGGGATGTCTGTTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGGCAGGGTGGTGTCTaGACAAGCTGGAAGTGTCCT +
Preference number: 2 (lower is better)
Translates to: GGMSVYLQCTLCARPLCSWQGGV*TSWKCP
Trigger: AGGACACTTCCAGCTTGTGCAGACACCACCCTGCCA...TGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGACATCCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
3UTR-3UTR GCA 90 bp GGATGTCTGTTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACTGGCAGGGTGGTGTCTaGACAAGCTGGAAGTGTCCT +
Preference number: 2 (lower is better)
Translates to: GCLFIYSAPFVPGPYVHDWQGGV*TSWKCP
Trigger: AGGACACTTCCAGCTTGTGCAGACACCACCCTGCCA...GTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
3UTR-3UTR CCA 90 bp CAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACAAAGGGCCCTCCAGACTCAATaGCAGGGTGGTGTCTGCACA +
Preference number: 2 (lower is better)
Translates to: QSCKAVYIISTLQFKKQRALQTQ*QGGVCT
Trigger: TGTGCAGACACCACCCTGCCATTGAGTCTGGAGGGC...CCTTTGTTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
3UTR-3UTR CCA 90 bp AGTTCTCTGGAAATTGCTGGTATTTGGGCAGCAACTCCAAGACCTGAACACCTTTTCTCTTCAGTTAGCTaGAGGGGTCTCCTCGGAAGT +
Preference number: 2 (lower is better)
Translates to: SSLEIAGIWAATPRPEHLFSSVS*RGLLGS
Trigger: ACTTCCGAGGAGACCCCTCCAGCTAACTGAAGAGAA...AAGGTGTTCAGGTCTTGGAGTTGCTGCCCAAATACCAGCAATTTCCAGAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409951.1
3UTR-3UTR CCA 90 bp TGTGTCCTCTGCTTTCAGCTGCTGCCAAGTACCTTCCAGAAGATGCCAACTGATTTCTCTGGAAATTGCTaGTATTTGGGCAGCAACTCC +
Preference number: 2 (lower is better)
Translates to: CVLCFQLLPSTFQKMPTDFSGNC*YLGSNS
Trigger: GGAGTTGCTGCCCAAATACCAGCAATTTCCAGAGAA...ATCAGTTGGCATCTTCTGGAAGGTACTTGGCAGCAGCTGAAAGCAGAGGACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409951.1
3UTR-3UTR CCA 90 bp TTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAAGGTGTCTGCACAAGCTaGAAGTGTCCTTGTGATGAG +
Preference number: 2 (lower is better)
Translates to: FIYSAPFVPGPYVHDLTQGVCTS*KCPCDE
Trigger: CTCATCACAAGGACACTTCCAGCTTGTGCAGACACC...TTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
3UTR-3UTR CCA 90 bp TCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACAGCCCTCCAGACTCAATaGCAGGGTGGTGTCTGCACA +
Preference number: 2 (lower is better)
Translates to: STILQGGLHHLHFTVQETALQTQ*QGGVCT
Trigger: TGTGCAGACACCACCCTGCCATTGAGTCTGGAGGGC...TGTTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
3UTR-3UTR GCA 90 bp CTCCAAGACCTGAACACCTTATGCCATTTAGGAGCACTAACATTTAGAAAATCACCTTTCCTCAGCTGGTaGCTCCTAGAGCTCCATGAC +
Preference number: 2 (lower is better)
Translates to: LQDLNTLCHLGALTFRKSPFLSW*LLELHD
Trigger: GTCATGGAGCTCTAGGAGGCACCAGCTGAGGAAAGG...TGATTTTCTAAATGTTAGTGCTCCTAAATGGCATAAGGTGTTCAGGTCTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
3UTR-3UTR GCA 90 bp CTCCAAGACCTGAACACCTTATGCCATTTAGGAGCACTAACATTTAGAAAATCATCCTGTTCCCCCTGCTaGACTAAACATGGTAGGCTG +
Preference number: 2 (lower is better)
Translates to: LQDLNTLCHLGALTFRKSSCSPC*TKHGRL
Trigger: CAGCCTACCATGTTTAGTGCAGCAGGGGGAACAGGA...TGATTTTCTAAATGTTAGTGCTCCTAAATGGCATAAGGTGTTCAGGTCTTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409951.1
3UTR-3UTR CCA 90 bp CAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACAAAGGGGTGTCTGCACAAGCTaGAAGTGTCCTTGTGATGAG +
Preference number: 2 (lower is better)
Translates to: QSCKAVYIISTLQFKKQRGVCTS*KCPCDE
Trigger: CTCATCACAAGGACACTTCCAGCTTGTGCAGACACC...CCTTTGTTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
3UTR-3UTR CCA 90 bp ACTCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAAGACTCAATGGCAGGGTaGTGTCTGCACAAGCTGGAA +
Preference number: 2 (lower is better)
Translates to: TLQSCKAVYIISTLQFKKDSMAG*CLHKLE
Trigger: TTCCAGCTTGTGCAGACACCACCCTGCCATTGAGTC...TTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
3UTR CAA 90 bp TTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATCTaGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACA +
Preference number: 2 (lower is better)
Translates to: LCQALMFMTLPNSTI*QGGLHHLHFTVQET
Trigger: TGTTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
3UTR-3UTR CCA 90 bp ACTCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAAGGTGTCTGCACAAGCTaGAAGTGTCCTTGTGATGAG +
Preference number: 2 (lower is better)
Translates to: TLQSCKAVYIISTLQFKKGVCTS*KCPCDE
Trigger: CTCATCACAAGGACACTTCCAGCTTGTGCAGACACC...TTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
3UTR CCA 72 bp AGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCAATaGCAGGGTGGTGTCTGCACAAGCTGGAAGTGTCCT +
Preference number: 3 (lower is better)
Translates to: RSKGSNRALQTQ*QGGVCTSWKCP
Trigger: AGGACACTTCCAGCTTGTGCAGACACCACCCTGCCATTGAGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
3UTR CCA 72 bp CGTCCTGTTCCCCCTGCTGCACTAAACATGGTAGGCTaGTTGTCCCTTTCTCTTCAGTTAGCTGGAGGGGTC +
Preference number: 3 (lower is better)
Translates to: RPVPPAALNMVG*LSLSLQLAGGV
Trigger: GACCCCTCCAGCTAACTGAAGAGAAAGGGACAACCAGCCTACCATGTTTAGTGCAGCAGGGGGAACAGGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409951.1
3UTR TCA 72 bp TTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATaGCCTTACCCAACTCTACAATCTTGCAAGGCGGTT +
Preference number: 3 (lower is better)
Translates to: LQCTLCARPLCS*PYPTLQSCKAV
Trigger: AACCGCCTTGCAAGATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
3UTR GCA 72 bp AGGAGGGATGTCTGTTTATTTACAGTGCACCCTTTGTaGCAGGCCCTTATGTTCATGACCTTACCCAACTCT +
Preference number: 3 (lower is better)
Translates to: RRDVCLFTVHPL*QALMFMTLPNS
Trigger: AGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGACATCCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
3UTR TCA 72 bp AATAGTGAGCCTGAAAAAGTTACTTCTAACCCAGCATaGGGAAAAGGGCTATGGAGTCCACAGTATAAGTCT +
Preference number: 3 (lower is better)
Translates to: NSEPEKVTSNPA*GKGLWSPQYKS
Trigger: AGACTTATACTGTGGACTCCATAGCCCTTTTCCTCATGCTGGGTTAGAAGTAACTTTTTCAGGCTCACTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409951.1
3UTR GCA 72 bp AAAGCCTACTATATGCCCTCACCAGGCTCCACATTTTaGAAACTTTCTTTCACTTTCATCGTCAAAACAATC +
Preference number: 3 (lower is better)
Translates to: KAYYMPSPGSTF*KLSFTFIVKTI
Trigger: GATTGTTTTGACGATGAAAGTGAAAGAAAGTTTGCAAAATGTGGAGCCTGGTGAGGGCATATAGTAGGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409951.1
3UTR GCA 72 bp GTATTTGGGCAGCAACTCCAAGACCTGAACACCTTATaGCATTTAGGAGCACTAACATTTAGAAAATCAATC +
Preference number: 3 (lower is better)
Translates to: VFGQQLQDLNTL*HLGALTFRKSI
Trigger: GATTGATTTTCTAAATGTTAGTGCTCCTAAATGGCATAAGGTGTTCAGGTCTTGGAGTTGCTGCCCAAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
3UTR TCA 72 bp GCAAACTTTCTTTCACTTTCATCGTCAAAACAATCCTaGAAGATAGATAGGAATGCACCCATTTTACAGACA +
Preference number: 3 (lower is better)
Translates to: ANFLSLSSSKQS*KIDRNAPILQT
Trigger: TGTCTGTAAAATGGGTGCATTCCTATCTATCTTTCAGGATTGTTTTGACGATGAAAGTGAAAGAAAGTTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR GCA 90 bp TTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCAACGGAACGCCTACATGTaGGCGCGGCAGGGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: FLAVSYRSKGSNRALQTQRNAYM*ARQGGR
Trigger: GCGGCCGCCCTGCCGCGCGCACATGTAGGCGTTCCG...TTGAGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp CCAGTGATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGCCGGGCGCCTGCTaGGCTCCGCCAGTCCACTGT +
Preference number: 4 (lower is better)
Translates to: PVIFLAVSYRSKGSNRALQPGAC*APPVHC
Trigger: ACAGTGGACTGGCGGAGCCCAGCAGGCGCCCGGCTG...GAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAATCACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR TCA 90 bp GCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCAATGGCAGAGGAGCGGCCCGGATTaGGCATCCCCCTCCACATCT +
Preference number: 4 (lower is better)
Translates to: AVSYRSKGSNRALQTQWQRSGPD*ASPSTS
Trigger: AGATGTGGAGGGGGATGCTCAATCCGGGCCGCTCCT...CTGCCATTGAGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp ATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTTCTCAGCCGGGCGCCTaGTGGGCTCCGCCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: IFLAVSYRSKGSNRALQTSQPGA*WAPPVH
Trigger: GTGGACTGGCGGAGCCCAGCAGGCGCCCGGCTGAGA...AGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp CCAAAGCCAGTGATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGTCTCAGCCGGGCGCCTaGTGGGCTCCGCCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: PKPVIFLAVSYRSKGSNRSQPGA*WAPPVH
Trigger: GTGGACTGGCGGAGCCCAGCAGGCGCCCGGCTGAGA...CCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAATCACTGGCTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp ATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCAGAGAGGGAGGCCGTaGGGCGGTCCAGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: IFLAVSYRSKGSNRALQTQRGRP*GGPART
Trigger: AGTCCTGGCTGGACCGCCGCACGGCCTCCCTCTCTG...AGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp CCAAAGCCAGTGATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGCAGCCGGGCGCCTGCTaGGCTCCGCCAGTCCACTGT +
Preference number: 4 (lower is better)
Translates to: PKPVIFLAVSYRSKGSNRQPGAC*APPVHC
Trigger: ACAGTGGACTGGCGGAGCCCAGCAGGCGCCCGGCTG...CCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAATCACTGGCTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR TCA 90 bp GCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCAATGGCAGCAGGACTCCACGGCATaGGTGAGAGAATCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: AVSYRSKGSNRALQTQWQQDSTA*VRESWE
Trigger: CTCCCAGGATTCTCTCACTCATGCCGTGGAGTCCTG...CTGCCATTGAGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR TCA 90 bp TTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCAAGGCTACTCCGCAGTCTaGACGCGTTACCGGGTCGCA +
Preference number: 4 (lower is better)
Translates to: FLAVSYRSKGSNRALQTQGYSAV*TRYRVA
Trigger: TGCGACCCGGTAACGCGTTCAGACTGCGGAGTAGCC...TTGAGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424086.5
CDS-3UTR GCA 90 bp GCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCAATGGCAGAAAGCCTGCCACTGCTaGCACCAAGCTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: AVSYRSKGSNRALQTQWQKACHC*HQAEGS
Trigger: GCTGCCTTCAGCTTGGTGGCAGCAGTGGCAGGCTTT...CTGCCATTGAGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp CCAAAGCCAGTGATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGCAGAGAGGGAGGCCGTaGGGCGGTCCAGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: PKPVIFLAVSYRSKGSNRQRGRP*GGPART
Trigger: AGTCCTGGCTGGACCGCCGCACGGCCTCCCTCTCTG...CCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAATCACTGGCTTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp CTCAGCTGGTGCCTCCTAGAGCTCCATGACACCCTGCCCTTCCGTCCTGTTCCCTCCTGTTCCCCCTGCTaGACTAAACATGGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: LSWCLLELHDTLPFRPVPSCSPC*TKHGRL
Trigger: CAGCCTACCATGTTTAGTGCAGCAGGGGGAACAGGA...GGGAACAGGACGGAAGGGCAGGGTGTCATGGAGCTCTAGGAGGCACCAGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR CCA 90 bp ATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTGAGGCTCTGCAGCTGTaGAGGGAGCGGAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: IFLAVSYRSKGSNRALQTEALQL*RERSWL
Trigger: CAGCCAGCTCCGCTCCCTCCACAGCTGCAGAGCCTC...AGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp GCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCAATGGCAGGGGCGTGCACGGCAGTaGTACTGCTTTCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: AVSYRSKGSNRALQTQWQGRARQ*YCFPGT
Trigger: TGTACCTGGAAAGCAGTACCACTGCCGTGCACGCCC...CTGCCATTGAGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp TTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCAAAGAAACTGGCAGGGATaGCCACCACAGCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: FLAVSYRSKGSNRALQTQRNWQG*PPQPQQ
Trigger: CTGCTGGGGCTGTGGTGGGCATCCCTGCCAGTTTCT...TTGAGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp CCAAAGCCAGTGATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGGGGCCAGCAGGGCGTaGACGGCAGTGGTACTGCTT +
Preference number: 4 (lower is better)
Translates to: PKPVIFLAVSYRSKGSNRGASRA*TAVVLL
Trigger: AAGCAGTACCACTGCCGTGCACGCCCTGCTGGCCCC...CCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAATCACTGGCTTTGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp ATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCTTTGCCCAAGAGACTaGGCAGGGCCAGGTTGCCCG +
Preference number: 4 (lower is better)
Translates to: IFLAVSYRSKGSNRALQTLCPRD*AGPGCP
Trigger: CGGGCAACCTGGCCCTGCGCAGTCTCTTGGGCAAAG...AGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp TTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCAACCCAGCAGGGAGTCTTaGGAAGCCTGCACTCACAGG +
Preference number: 4 (lower is better)
Translates to: FLAVSYRSKGSNRALQTQPSRES*EACTHR
Trigger: CCTGTGAGTGCAGGCTTCCCAAGACTCCCTGCTGGG...TTGAGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp ATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCCAGCCGGGCGCCTGCTaGGCTCCGCCAGTCCACTGT +
Preference number: 4 (lower is better)
Translates to: IYSAPFVPGPYVHDLTQLQPGAC*APPVHC
Trigger: ACAGTGGACTGGCGGAGCCCAGCAGGCGCCCGGCTG...GAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp GGATGTCTGTTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACTCTCAGCCGGGCGCCTaGTGGGCTCCGCCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: GCLFIYSAPFVPGPYVHDSQPGA*WAPPVH
Trigger: GTGGACTGGCGGAGCCCAGCAGGCGCCCGGCTGAGA...GTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGACATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp TTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCAAAAAGCCTGCCACTGCTaGCACCAAGCTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: FLAVSYRSKGSNRALQTQKACHC*HQAEGS
Trigger: GCTGCCTTCAGCTTGGTGGCAGCAGTGGCAGGCTTT...TTGAGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp TTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATCTTGCAAGGCCAGAGAGGGAGGCCGTaGGGCGGTCCAGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: LCQALMFMTLPNSTILQGQRGRP*GGPART
Trigger: AGTCCTGGCTGGACCGCCGCACGGCCTCCCTCTCTG...GCCTTGCAAGATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp CCAAAGCCAGTGATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGATCCCCCTCCACATCTaGAGCACAGAGTCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: PKPVIFLAVSYRSKGSNRIPLHI*STESRR
Trigger: CCGCCGGGACTCTGTGCTGCAGATGTGGAGGGGGAT...CCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAATCACTGGCTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp GCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCAATGGCAGGAGGTGGTACGAGATTaGAACTCCAAACAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: AVSYRSKGSNRALQTQWQEVVRD*NSKQAC
Trigger: GCAGGCCTGTTTGGAGTTCCAATCTCGTACCACCTC...CTGCCATTGAGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp TGCACTAAACATGGTAGGCTGGTTGTCCCTTTCTCTTCAGTTAGCTGGAGGGGTGAGGCTCTGCAGCTGTaGAGGGAGCGGAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CTKHGRLVVPFSSVSWRGEALQL*RERSWL
Trigger: CAGCCAGCTCCGCTCCCTCCACAGCTGCAGAGCCTC...ACCCCTCCAGCTAACTGAAGAGAAAGGGACAACCAGCCTACCATGTTTAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR CCA 90 bp CCAGTGATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCGGTCTCCCAAGAAACTaGCAGGGATGCCCACCACAG +
Preference number: 4 (lower is better)
Translates to: PVIFLAVSYRSKGSNRALGLPRN*QGCPPQ
Trigger: CTGTGGTGGGCATCCCTGCCAGTTTCTTGGGAGACC...GAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAATCACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp TTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCAAGGTCTCCCAAGAAACTaGCAGGGATGCCCACCACAG +
Preference number: 4 (lower is better)
Translates to: FLAVSYRSKGSNRALQTQGLPRN*QGCPPQ
Trigger: CTGTGGTGGGCATCCCTGCCAGTTTCTTGGGAGACC...TTGAGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp AGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATGCCCCAGGGTGTACTTaGCACCCACGCCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: SAPFVPGPYVHDLTQLYNAPGCT*HPRPVP
Trigger: GGGCACTGGGCGTGGGTGCCAAGTACACCCTGGGGC...ATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp TTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATCTTGCAAGGCGCCCCAGGGTGTACTTaGCACCCACGCCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LCQALMFMTLPNSTILQGAPGCT*HPRPVP
Trigger: GGGCACTGGGCGTGGGTGCCAAGTACACCCTGGGGC...GCCTTGCAAGATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp TTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCAACAGCCCGTAAATTCATaGGGCCTGCATGGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: FLAVSYRSKGSNRALQTQQPVNS*GLHGAP
Trigger: TGGGGCTCCATGCAGGCCCCATGAATTTACGGGCTG...TTGAGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
3UTR CAA 72 bp GTTCCAGATCGCCCTGTTAAAGTGGTAGGCCAGGATTaGAACCCACAGCTGGCTGCCCACTCTGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: VPDRPVKVVGQD*NPQLAAHSALS
Trigger: GGAGAGAGCAGAGTGGGCAGCCAGCTGTGGGTTCAAATCCTGGCCTACCACTTTAACAGGGCGATCTGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR TCA 90 bp GCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCAATGGCAGCTTGTAGCAATGGCCTaGAGGAACACCTATGTCCTG +
Preference number: 4 (lower is better)
Translates to: AVSYRSKGSNRALQTQWQLVAMA*RNTYVL
Trigger: CAGGACATAGGTGTTCCTTCAGGCCATTGCTACAAG...CTGCCATTGAGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR TCA 90 bp TTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCAACTGCTGCCACCAAGCTaGAGGCAGCCCGTAAATTCA +
Preference number: 4 (lower is better)
Translates to: FLAVSYRSKGSNRALQTQLLPPS*RQPVNS
Trigger: TGAATTTACGGGCTGCCTTCAGCTTGGTGGCAGCAG...TTGAGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp CCAAAGCCAGTGATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGTGTCTCTGCACAAATaGTGCGGTCCGCCACAGGGG +
Preference number: 4 (lower is better)
Translates to: PKPVIFLAVSYRSKGSNRVSLHK*CGPPQG
Trigger: CCCCTGTGGCGGACCGCAGCATTTGTGCAGAGACAC...CCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAATCACTGGCTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp TTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCAACGCCAGTCCACTGTATaGCCATGTATGACCACGGGA +
Preference number: 4 (lower is better)
Translates to: FLAVSYRSKGSNRALQTQRQSTV*PCMTTG
Trigger: TCCCGTGGTCATACATGGGCATACAGTGGACTGGCG...TTGAGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp ATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCGGGGCCAGCAGGGCGTaGACGGCAGTGGTACTGCTT +
Preference number: 4 (lower is better)
Translates to: IYSAPFVPGPYVHDLTQLGASRA*TAVVLL
Trigger: AAGCAGTACCACTGCCGTGCACGCCCTGCTGGCCCC...GAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp AGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATCTAGGGCCATCGCGCTaGGGGGTGGGCCTAGAACAC +
Preference number: 4 (lower is better)
Translates to: SAPFVPGPYVHDLTQLYNLGPSR*GVGLEH
Trigger: GTGTTCTAGGCCCACCCCGCAGCGCGATGGCCCTAG...ATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424086.5
CDS-3UTR CCA 90 bp AGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATGAGGCTCTGCAGCTGTaGAGGGAGCGGAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SAPFVPGPYVHDLTQLYNEALQL*RERSWL
Trigger: CAGCCAGCTCCGCTCCCTCCACAGCTGCAGAGCCTC...ATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp ATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTGGTCTCCCAAGAAACTaGCAGGGATGCCCACCACAG +
Preference number: 4 (lower is better)
Translates to: IFLAVSYRSKGSNRALQTGLPRN*QGCPPQ
Trigger: CTGTGGTGGGCATCCCTGCCAGTTTCTTGGGAGACC...AGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp ATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTGCCAAGGCGAACTTCTaGGCTTCACGGGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: IFLAVSYRSKGSNRALQTAKANF*ASRDKV
Trigger: GACCTTGTCCCGTGAAGCCCAGAAGTTCGCCTTGGC...AGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp ATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTGGGCGTGCACGGCAGTaGTACTGCTTTCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: IFLAVSYRSKGSNRALQTGRARQ*YCFPGT
Trigger: TGTACCTGGAAAGCAGTACCACTGCCGTGCACGCCC...AGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp GCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCAATGGCAGGGTGTCTGCACAAGCTaGAAGTGTCCTTGTGATGAG +
Preference number: 4 (lower is better)
Translates to: AVSYRSKGSNRALQTQWQGVCTS*KCPCDE
Trigger: CTCATCACAAGGACACTTCCAGCTTGTGCAGACACC...CTGCCATTGAGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp ATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTGCCCTCCAGACTCAATaGCAGGGTGGTGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: IFLAVSYRSKGSNRALQTALQTQ*QGGVCT
Trigger: TGTGCAGACACCACCCTGCCATTGAGTCTGGAGGGC...AGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp TTCCTCAGCTGGTGCCTCCTAGAGCTCCATGACACCCTGCCCTTCCGTCCTGTTTTCTCTTCAGTTAGCTaGAGGGGTCTCCTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: FLSWCLLELHDTLPFRPVFSSVS*RGLLGS
Trigger: ACTTCCGAGGAGACCCCTCCAGCTAACTGAAGAGAA...AACAGGACGGAAGGGCAGGGTGTCATGGAGCTCTAGGAGGCACCAGCTGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409951.1
3UTR CAA 72 bp CCTGTTCCCCCTGCTGCACTAAACATGGTAGGCTGGTaGTCCCTTTCTCTTCAGTTAGCTGGAGGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PVPPAALNMVGW*SLSLQLAGGVS
Trigger: GGAGACCCCTCCAGCTAACTGAAGAGAAAGGGACAACCAGCCTACCATGTTTAGTGCAGCAGGGGGAACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR GCA 90 bp TGTGTCCTCTGCTTTCAGCTGCTGCCAAGTACCTTCCAGAAGATGCCAACTGATTCTCTGCACAAATGCTaGGGTCCGCCACAGGGGACC +
Preference number: 4 (lower is better)
Translates to: CVLCFQLLPSTFQKMPTDSLHKC*GPPQGT
Trigger: GGTCCCCTGTGGCGGACCGCAGCATTTGTGCAGAGA...ATCAGTTGGCATCTTCTGGAAGGTACTTGGCAGCAGCTGAAAGCAGAGGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR GCA 90 bp CCAAAGCCAGTGATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGCCTGTCCTGTGTCTCTaGACAAATGCTGCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: PKPVIFLAVSYRSKGSNRPVLCL*TNAAVR
Trigger: GCGGACCGCAGCATTTGTGCAGAGACACAGGACAGG...CCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAATCACTGGCTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp CCAAAGCCAGTGATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGAAAGCCTGCCACTGCTaGCACCAAGCTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PKPVIFLAVSYRSKGSNRKACHC*HQAEGS
Trigger: GCTGCCTTCAGCTTGGTGGCAGCAGTGGCAGGCTTT...CCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAATCACTGGCTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp TTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATCTTGCAAGGCGCTACGCTTCCACTCTaGGCCCCTAGGCTACTCCGC +
Preference number: 4 (lower is better)
Translates to: LCQALMFMTLPNSTILQGATLPL*APRLLR
Trigger: GCGGAGTAGCCTAGGGGCCCAGAGTGGAAGCGTAGC...GCCTTGCAAGATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424086.5
CDS-3UTR TCA 90 bp CCAAAGCCAGTGATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGACTCCACGGCATGAGTaGGAGAATCCTGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PKPVIFLAVSYRSKGSNRTPRHE*ENPGRR
Trigger: CCTTCTCCCAGGATTCTCTCACTCATGCCGTGGAGT...CCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAATCACTGGCTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp GGAGGGATGTCTGTTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCACCGCCACAGGGGACCTaGCATGAGTGTAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: GGMSVYLQCTLCARPLCSPPQGT*HECSHC
Trigger: GCAGTGACTACACTCATGGCAGGTCCCCTGTGGCGG...TGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGACATCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp AGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATTCTCTGCACAAATGCTaGGGTCCGCCACAGGGGACC +
Preference number: 4 (lower is better)
Translates to: SAPFVPGPYVHDLTQLYNSLHKC*GPPQGT
Trigger: GGTCCCCTGTGGCGGACCGCAGCATTTGTGCAGAGA...ATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp GGAGGGATGTCTGTTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCAGTGTCTCTGCACAAATaGTGCGGTCCGCCACAGGGG +
Preference number: 4 (lower is better)
Translates to: GGMSVYLQCTLCARPLCSVSLHK*CGPPQG
Trigger: CCCCTGTGGCGGACCGCAGCATTTGTGCAGAGACAC...TGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGACATCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp ATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTAACTCCAAACAGGCCTaGACAGGAACCCACCAAGAG +
Preference number: 4 (lower is better)
Translates to: IFLAVSYRSKGSNRALQTNSKQA*TGTHQE
Trigger: CTCTTGGTGGGTTCCTGTGCAGGCCTGTTTGGAGTT...AGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp ACTCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACGGAACGCCTACATGTaGGCGCGGCAGGGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: TLQSCKAVYIISTLQFKKRNAYM*ARQGGR
Trigger: GCGGCCGCCCTGCCGCGCGCACATGTAGGCGTTCCG...TTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp ATTAGGCAGCAGCGAGTTCTCTGGAAATTGCTGGTATTTGGGCAGCAACTCCAAAGCTCCATGACACCCTaGCCTTCCGTCCTGTTCCCC +
Preference number: 4 (lower is better)
Translates to: IRQQRVLWKLLVFGQQLQSSMTP*PSVLFP
Trigger: GGGGAACAGGACGGAAGGGCAGGGTGTCATGGAGCT...TTGGAGTTGCTGCCCAAATACCAGCAATTTCCAGAGAACTCGCTGCTGCCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR CCA 90 bp TCCCTTTCTCTTCAGTTAGCTGGAGGGGTCTCCTCGGAAGTTCTGCTCAGTGACGAGGTGGTACGAGATTaGAACTCCAAACAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SLSLQLAGGVSSEVLLSDEVVRD*NSKQAC
Trigger: GCAGGCCTGTTTGGAGTTCCAATCTCGTACCACCTC...GTCACTGAGCAGAACTTCCGAGGAGACCCCTCCAGCTAACTGAAGAGAAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR CCA 90 bp ATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTTCCTGTAGCACCTCTTaGAAGAGGCTCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: IFLAVSYRSKGSNRALQTSCSTS*KRLCSC
Trigger: ACAGCTGCAGAGCCTCTTCCAAGAGGTGCTACAGGA...AGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp TTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACCCGCCACAGGGGACCTaGCATGAGTGTAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: LFTVHPLCQALMFMTLPNPPQGT*HECSHC
Trigger: GCAGTGACTACACTCATGGCAGGTCCCCTGTGGCGG...GTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp AGTTCTCTGGAAATTGCTGGTATTTGGGCAGCAACTCCAAGACCTGAACACCTTCCGCCACAGGGGACCTaGCATGAGTGTAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: SSLEIAGIWAATPRPEHLPPQGT*HECSHC
Trigger: GCAGTGACTACACTCATGGCAGGTCCCCTGTGGCGG...AAGGTGTTCAGGTCTTGGAGTTGCTGCCCAAATACCAGCAATTTCCAGAGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR GCA 90 bp GGAGGGATGTCTGTTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCACCTGTCCTGTGTCTCTaGACAAATGCTGCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: GGMSVYLQCTLCARPLCSPVLCL*TNAAVR
Trigger: GCGGACCGCAGCATTTGTGCAGAGACACAGGACAGG...TGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGACATCCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp CCAAAGCCAGTGATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGAGTCTTGGGAAGCCTaGACTCACAGGTTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: PKPVIFLAVSYRSKGSNRESWEA*THRLEG
Trigger: ACCTTCCAACCTGTGAGTGCAGGCTTCCCAAGACTC...CCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAATCACTGGCTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp TTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATCTTGCAAGGCGTAGGCCACAAAGCCTaGCACTGCTGCCACCAAGCT +
Preference number: 4 (lower is better)
Translates to: LCQALMFMTLPNSTILQGVGHKA*HCCHQA
Trigger: AGCTTGGTGGCAGCAGTGGCAGGCTTTGTGGCCTAC...GCCTTGCAAGATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp AGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATTGCGCAGGGCCAGGTTaGCCGACAGAAGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: SAPFVPGPYVHDLTQLYNCAGPG*PTEASH
Trigger: ATGAGAAGCTTCTGTCGGGCAACCTGGCCCTGCGCA...ATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp CCAGTGATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCTCTGTTTATTTACAGTaGACCCTTTGTGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PVIFLAVSYRSKGSNRALSVYLQ*TLCARP
Trigger: GGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGA...GAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAATCACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp GGAGGGATGTCTGTTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCACATGAGTGTAGTCACTaGGGACAATCTCCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GGMSVYLQCTLCARPLCSHECSH*GQSPPP
Trigger: CGGCGGCGGAGATTGTCCGCAGTGACTACACTCATG...TGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGACATCCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401466.5
CDS-3UTR CCA 90 bp CCAAAGCCAGTGATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGCCTGCACTCACAGGTTaGAAGGTGAAGGTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PKPVIFLAVSYRSKGSNRPALTG*KVKVVK
Trigger: CTTCACCACCTTCACCTTCCAACCTGTGAGTGCAGG...CCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAATCACTGGCTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp TTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATCTTGCAAGGCGCCAAGGCGAACTTCTaGGCTTCACGGGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: LCQALMFMTLPNSTILQGAKANF*ASRDKV
Trigger: GACCTTGTCCCGTGAAGCCCAGAAGTTCGCCTTGGC...GCCTTGCAAGATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp GGAGGGATGTCTGTTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCAGCCAAGGCGAACTTCTaGGCTTCACGGGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: GGMSVYLQCTLCARPLCSAKANF*ASRDKV
Trigger: GACCTTGTCCCGTGAAGCCCAGAAGTTCGCCTTGGC...TGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGACATCCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp GGAGGGATGTCTGTTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCAGGGCGTGCACGGCAGTaGTACTGCTTTCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: GGMSVYLQCTLCARPLCSGRARQ*YCFPGT
Trigger: TGTACCTGGAAAGCAGTACCACTGCCGTGCACGCCC...TGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGACATCCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp TTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATCTTGCAAGGCCAGCCCGTAAATTCATaGGGCCTGCATGGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LCQALMFMTLPNSTILQGQPVNS*GLHGAP
Trigger: TGGGGCTCCATGCAGGCCCCATGAATTTACGGGCTG...GCCTTGCAAGATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp AGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATGCCCTCCAGACTCAATaGCAGGGTGGTGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: SAPFVPGPYVHDLTQLYNALQTQ*QGGVCT
Trigger: TGTGCAGACACCACCCTGCCATTGAGTCTGGAGGGC...ATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR TCA 90 bp TTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATCTTGCAAGGCACTCCACGGCATGAGTaGGAGAATCCTGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LCQALMFMTLPNSTILQGTPRHE*ENPGRR
Trigger: CCTTCTCCCAGGATTCTCTCACTCATGCCGTGGAGT...GCCTTGCAAGATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR TCA 90 bp AAGTTACTTCTAACCCAGCATGAGGAAAAGGGCTATGGAGTCCACAGTATAAGTCCTCCTAGAGCTCCATaGCACCCTGCCCTTCCGTCC +
Preference number: 4 (lower is better)
Translates to: KLLLTQHEEKGYGVHSISPPRAP*HPALPS
Trigger: GGACGGAAGGGCAGGGTGTCATGGAGCTCTAGGAGG...ACTTATACTGTGGACTCCATAGCCCTTTTCCTCATGCTGGGTTAGAAGTAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR GCA 90 bp TTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAATCTCTGCACAAATGCTaGGGTCCGCCACAGGGGACC +
Preference number: 4 (lower is better)
Translates to: FIYSAPFVPGPYVHDLTQSLHKC*GPPQGT
Trigger: GGTCCCCTGTGGCGGACCGCAGCATTTGTGCAGAGA...TTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp AGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATCGCCAGTCCACTGTATaGCCATGTATGACCACGGGA +
Preference number: 4 (lower is better)
Translates to: SAPFVPGPYVHDLTQLYNRQSTV*PCMTTG
Trigger: TCCCGTGGTCATACATGGGCATACAGTGGACTGGCG...ATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp TTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATCTTGCAAGGCCGCCAGTCCACTGTATaGCCATGTATGACCACGGGA +
Preference number: 4 (lower is better)
Translates to: LCQALMFMTLPNSTILQGRQSTV*PCMTTG
Trigger: TCCCGTGGTCATACATGGGCATACAGTGGACTGGCG...GCCTTGCAAGATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp GGATGTCTGTTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACGTAGGCCACAAAGCCTaGCACTGCTGCCACCAAGCT +
Preference number: 4 (lower is better)
Translates to: GCLFIYSAPFVPGPYVHDVGHKA*HCCHQA
Trigger: AGCTTGGTGGCAGCAGTGGCAGGCTTTGTGGCCTAC...GTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp TTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTGCGCAGGGCCAGGTTaGCCGACAGAAGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LFTVHPLCQALMFMTLPNCAGPG*PTEASH
Trigger: ATGAGAAGCTTCTGTCGGGCAACCTGGCCCTGCGCA...GTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp TTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATCTTGCAAGGCTGGCAGGGTGGTGTCTaGACAAGCTGGAAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: LCQALMFMTLPNSTILQGWQGGV*TSWKCP
Trigger: AGGACACTTCCAGCTTGTGCAGACACCACCCTGCCA...GCCTTGCAAGATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp ATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTGGCAGGGTGGTGTCTaGACAAGCTGGAAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: IYSAPFVPGPYVHDLTQLWQGGV*TSWKCP
Trigger: AGGACACTTCCAGCTTGTGCAGACACCACCCTGCCA...GAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp TTACTTCTAACCCAGCATGAGGAAAAGGGCTATGGAGTCCACAGTATAAGTCTGGAACCCACAGCTGGCTaGCCACTCTGCTCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LLLTQHEEKGYGVHSISLEPTAG*PLCSLP
Trigger: AGGGAGAGAGCAGAGTGGGCAGCCAGCTGTGGGTTC...CAGACTTATACTGTGGACTCCATAGCCCTTTTCCTCATGCTGGGTTAGAAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR CCA 90 bp CAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACAAAGGGAGGCTCTGCAGCTGTaGAGGGAGCGGAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QSCKAVYIISTLQFKKQREALQL*RERSWL
Trigger: CAGCCAGCTCCGCTCCCTCCACAGCTGCAGAGCCTC...CCTTTGTTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp GGATGTCTGTTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACGGTACACCACTTCCCTaGCCAAGGCGAACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: GCLFIYSAPFVPGPYVHDGTPLP*PRRTSG
Trigger: CCCAGAAGTTCGCCTTGGCCAGGGAAGTGGTGTACC...GTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp TCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACAGCCCCAGGGTGTACTTaGCACCCACGCCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: STILQGGLHHLHFTVQETAPGCT*HPRPVP
Trigger: GGGCACTGGGCGTGGGTGCCAAGTACACCCTGGGGC...TGTTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp ATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCGGACGATGTTCCCGCTaGGTGTATACAGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: IYSAPFVPGPYVHDLTQLGRCSR*VYTASP
Trigger: GGGAGAAGCTGTATACACCCAGCGGGAACATCGTCC...GAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp GGAGGGATGTCTGTTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCAGGACGATGTTCCCGCTaGGTGTATACAGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GGMSVYLQCTLCARPLCSGRCSR*VYTASP
Trigger: GGGAGAAGCTGTATACACCCAGCGGGAACATCGTCC...TGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGACATCCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp GGAGGGATGTCTGTTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATTCGGAACAAGTGTCTaGGGACGATGTTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GGMSVYLQCTLCARPLCSFGTSV*GRCSRW
Trigger: CCAGCGGGAACATCGTCCCCAGACACTTGTTCCGAA...TGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGACATCCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR TCA 90 bp TTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACAGGACTCCACGGCATaGGTGAGAGAATCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: FIYSAPFVPGPYVHDLTQQDSTA*VRESWE
Trigger: CTCCCAGGATTCTCTCACTCATGCCGTGGAGTCCTG...TTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR TCA 90 bp TTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCAATGTAGGGTAAATGTTTaGTTCGGAACAAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: FLAVSYRSKGSNRALQTQCRVNV*FGTSVW
Trigger: CCAGACACTTGTTCCGAATCAAACATTTACCCTACA...TTGAGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR TCA 90 bp CAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACAAAGGAGGAGCGGCCCGGATTaGGCATCCCCCTCCACATCT +
Preference number: 4 (lower is better)
Translates to: QSCKAVYIISTLQFKKQRRSGPD*ASPSTS
Trigger: AGATGTGGAGGGGGATGCTCAATCCGGGCCGCTCCT...CCTTTGTTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR TCA 90 bp TTCCTCAGCTGGTGCCTCCTAGAGCTCCATGACACCCTGCCCTTCCGTCCTGTTTCGTCAAAACAATCCTaGAAGATAGATAGGAATGCA +
Preference number: 4 (lower is better)
Translates to: FLSWCLLELHDTLPFRPVSSKQS*KIDRNA
Trigger: TGCATTCCTATCTATCTTTCAGGATTGTTTTGACGA...AACAGGACGGAAGGGCAGGGTGTCATGGAGCTCTAGGAGGCACCAGCTGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR GCA 90 bp GGAGGGATGTCTGTTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCAAACTCCAAACAGGCCTaGACAGGAACCCACCAAGAG +
Preference number: 4 (lower is better)
Translates to: GGMSVYLQCTLCARPLCSNSKQA*TGTHQE
Trigger: CTCTTGGTGGGTTCCTGTGCAGGCCTGTTTGGAGTT...TGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGACATCCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp TTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATCTTGCAAGGCGAGTCTTGGGAAGCCTaGACTCACAGGTTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: LCQALMFMTLPNSTILQGESWEA*THRLEG
Trigger: ACCTTCCAACCTGTGAGTGCAGGCTTCCCAAGACTC...GCCTTGCAAGATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp GGAGGGATGTCTGTTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCAGCACGGCAGTGGTACTaGTTTCCAGGTACACCACTT +
Preference number: 4 (lower is better)
Translates to: GGMSVYLQCTLCARPLCSARQWY*FPGTPL
Trigger: AAGTGGTGTACCTGGAAAGCAGTACCACTGCCGTGC...TGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGACATCCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp ACTCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAAGGGGCCAGCAGGGCGTaGACGGCAGTGGTACTGCTT +
Preference number: 4 (lower is better)
Translates to: TLQSCKAVYIISTLQFKKGASRA*TAVVLL
Trigger: AAGCAGTACCACTGCCGTGCACGCCCTGCTGGCCCC...TTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp CAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACAAAGGCTTTGCCCAAGAGACTaGGCAGGGCCAGGTTGCCCG +
Preference number: 4 (lower is better)
Translates to: QSCKAVYIISTLQFKKQRLCPRD*AGPGCP
Trigger: CGGGCAACCTGGCCCTGCGCAGTCTCTTGGGCAAAG...CCTTTGTTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp AGTTCTCTGGAAATTGCTGGTATTTGGGCAGCAACTCCAAGACCTGAACACCTTCCGTCCTGTTCCCCCTaGTGCACTAAACATGGTAGG +
Preference number: 4 (lower is better)
Translates to: SSLEIAGIWAATPRPEHLPSCSP*CTKHGR
Trigger: CCTACCATGTTTAGTGCAGCAGGGGGAACAGGACGG...AAGGTGTTCAGGTCTTGGAGTTGCTGCCCAAATACCAGCAATTTCCAGAGAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR GCA 90 bp TGCACTAAACATGGTAGGCTGGTTGTCCCTTTCTCTTCAGTTAGCTGGAGGGGTTCCTCTGCTTTCAGCTaGTGCCAAGTACCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: CTKHGRLVVPFSSVSWRGSSAFS*CQVPSR
Trigger: TCTGGAAGGTACTTGGCAGCAGCTGAAAGCAGAGGA...ACCCCTCCAGCTAACTGAAGAGAAAGGGACAACCAGCCTACCATGTTTAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR CCA 90 bp TTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATCTTGCAAGGCGAGGTGGTACGAGATTaGAACTCCAAACAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LCQALMFMTLPNSTILQGEVVRD*NSKQAC
Trigger: GCAGGCCTGTTTGGAGTTCCAATCTCGTACCACCTC...GCCTTGCAAGATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp AGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATTCCTGTAGCACCTCTTaGAAGAGGCTCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SAPFVPGPYVHDLTQLYNSCSTS*KRLCSC
Trigger: ACAGCTGCAGAGCCTCTTCCAAGAGGTGCTACAGGA...ATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp GGAGGGATGTCTGTTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCACCTGCACTCACAGGTTaGAAGGTGAAGGTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GGMSVYLQCTLCARPLCSPALTG*KVKVVK
Trigger: CTTCACCACCTTCACCTTCCAACCTGTGAGTGCAGG...TGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGACATCCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp ACCCAACTCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCACCCAGCAGGGAGTCTTaGGAAGCCTGCACTCACAGG +
Preference number: 4 (lower is better)
Translates to: TQLYNLARRFTSSPLYSSPSRES*EACTHR
Trigger: CCTGTGAGTGCAGGCTTCCCAAGACTCCCTGCTGGG...TGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGTTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp TTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAAGGTACACCACTTCCCTaGCCAAGGCGAACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: FIYSAPFVPGPYVHDLTQGTPLP*PRRTSG
Trigger: CCCAGAAGTTCGCCTTGGCCAGGGAAGTGGTGTACC...TTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR TCA 90 bp ATTAGGCAGCAGCGAGTTCTCTGGAAATTGCTGGTATTTGGGCAGCAACTCCAACTTGTAGCAATGGCCTaGAGGAACACCTATGTCCTG +
Preference number: 4 (lower is better)
Translates to: IRQQRVLWKLLVFGQQLQLVAMA*RNTYVL
Trigger: CAGGACATAGGTGTTCCTTCAGGCCATTGCTACAAG...TTGGAGTTGCTGCCCAAATACCAGCAATTTCCAGAGAACTCGCTGCTGCCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR TCA 90 bp TTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAAACTCCACGGCATGAGTaGGAGAATCCTGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: FIYSAPFVPGPYVHDLTQTPRHE*ENPGRR
Trigger: CCTTCTCCCAGGATTCTCTCACTCATGCCGTGGAGT...TTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR TCA 90 bp ACTCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAAAGGAGCGGCCCGGATTaGGCATCCCCCTCCACATCT +
Preference number: 4 (lower is better)
Translates to: TLQSCKAVYIISTLQFKKRSGPD*ASPSTS
Trigger: AGATGTGGAGGGGGATGCTCAATCCGGGCCGCTCCT...TTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp ACCCAACTCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCACCTGTCCTGTGTCTCTaGACAAATGCTGCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: TQLYNLARRFTSSPLYSSPVLCL*TNAAVR
Trigger: GCGGACCGCAGCATTTGTGCAGAGACACAGGACAGG...TGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGTTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp AGTTCTCTGGAAATTGCTGGTATTTGGGCAGCAACTCCAAGACCTGAACACCTTAACTCCAAACAGGCCTaGACAGGAACCCACCAAGAG +
Preference number: 4 (lower is better)
Translates to: SSLEIAGIWAATPRPEHLNSKQA*TGTHQE
Trigger: CTCTTGGTGGGTTCCTGTGCAGGCCTGTTTGGAGTT...AAGGTGTTCAGGTCTTGGAGTTGCTGCCCAAATACCAGCAATTTCCAGAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR GCA 90 bp CAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACAAAGGAGAAACTGGCAGGGATaGCCACCACAGCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: QSCKAVYIISTLQFKKQRRNWQG*PPQPQQ
Trigger: CTGCTGGGGCTGTGGTGGGCATCCCTGCCAGTTTCT...CCTTTGTTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp TTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACGCACGGCAGTGGTACTaGTTTCCAGGTACACCACTT +
Preference number: 4 (lower is better)
Translates to: LFTVHPLCQALMFMTLPNARQWY*FPGTPL
Trigger: AAGTGGTGTACCTGGAAAGCAGTACCACTGCCGTGC...GTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp ACCCAACTCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAGTAGGCCACAAAGCCTaGCACTGCTGCCACCAAGCT +
Preference number: 4 (lower is better)
Translates to: TQLYNLARRFTSSPLYSSVGHKA*HCCHQA
Trigger: AGCTTGGTGGCAGCAGTGGCAGGCTTTGTGGCCTAC...TGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGTTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp ACTCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACTTTGCCCAAGAGACTaGGCAGGGCCAGGTTGCCCG +
Preference number: 4 (lower is better)
Translates to: TLQSCKAVYIISTLQFKKLCPRD*AGPGCP
Trigger: CGGGCAACCTGGCCCTGCGCAGTCTCTTGGGCAAAG...TTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp TCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACAATCCCCCTCCACATCTaGAGCACAGAGTCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: STILQGGLHHLHFTVQETIPLHI*STESRR
Trigger: CCGCCGGGACTCTGTGCTGCAGATGTGGAGGGGGAT...TGTTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp TTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACGAGGTGGTACGAGATTaGAACTCCAAACAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LFTVHPLCQALMFMTLPNEVVRD*NSKQAC
Trigger: GCAGGCCTGTTTGGAGTTCCAATCTCGTACCACCTC...GTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp TTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAATTCGGAACAAGTGTCTaGGGACGATGTTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: FIYSAPFVPGPYVHDLTQFGTSV*GRCSRW
Trigger: CCAGCGGGAACATCGTCCCCAGACACTTGTTCCGAA...TTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp AGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATGGTGTCTGCACAAGCTaGAAGTGTCCTTGTGATGAG +
Preference number: 4 (lower is better)
Translates to: SAPFVPGPYVHDLTQLYNGVCTS*KCPCDE
Trigger: CTCATCACAAGGACACTTCCAGCTTGTGCAGACACC...ATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp ACCCAACTCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAGCCCTCCAGACTCAATaGCAGGGTGGTGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: TQLYNLARRFTSSPLYSSALQTQ*QGGVCT
Trigger: TGTGCAGACACCACCCTGCCATTGAGTCTGGAGGGC...TGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGTTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR TCA 90 bp CAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACAAAGGCAGGACTCCACGGCATaGGTGAGAGAATCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: QSCKAVYIISTLQFKKQRQDSTA*VRESWE
Trigger: CTCCCAGGATTCTCTCACTCATGCCGTGGAGTCCTG...CCTTTGTTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp TTACTTCTAACCCAGCATGAGGAAAAGGGCTATGGAGTCCACAGTATAAGTCTGCATGAGTGTAGTCACTaGGGACAATCGGGTCGCATC +
Preference number: 4 (lower is better)
Translates to: LLLTQHEEKGYGVHSISLHECSH*GQSGRI
Trigger: GATGCGACCCGATTGTCCGCAGTGACTACACTCATG...CAGACTTATACTGTGGACTCCATAGCCCTTTTCCTCATGCTGGGTTAGAAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR GCA 90 bp ACTCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAATCTCTGCACAAATGCTaGGGTCCGCCACAGGGGACC +
Preference number: 4 (lower is better)
Translates to: TLQSCKAVYIISTLQFKKSLHKC*GPPQGT
Trigger: GGTCCCCTGTGGCGGACCGCAGCATTTGTGCAGAGA...TTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp CTCCAAGACCTGAACACCTTATGCCATTTAGGAGCACTAACATTTAGAAAATCAGTGTCTCTGCACAAATaGTGCGGTCCGCCACAGGGG +
Preference number: 4 (lower is better)
Translates to: LQDLNTLCHLGALTFRKSVSLHK*CGPPQG
Trigger: CCCCTGTGGCGGACCGCAGCATTTGTGCAGAGACAC...TGATTTTCTAAATGTTAGTGCTCCTAAATGGCATAAGGTGTTCAGGTCTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR GCA 90 bp ACTCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAAGTGTCTCTGCACAAATaGTGCGGTCCGCCACAGGGG +
Preference number: 4 (lower is better)
Translates to: TLQSCKAVYIISTLQFKKVSLHK*CGPPQG
Trigger: CCCCTGTGGCGGACCGCAGCATTTGTGCAGAGACAC...TTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp AAAAAGTTACTTCTAACCCAGCATGAGGAAAAGGGCTATGGAGTCCACAGTATACCTGTCCTGTGTCTCTaGACAAATGCTGCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: KKLLLTQHEEKGYGVHSIPVLCL*TNAAVR
Trigger: GCGGACCGCAGCATTTGTGCAGAGACACAGGACAGG...TATACTGTGGACTCCATAGCCCTTTTCCTCATGCTGGGTTAGAAGTAACTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR GCA 90 bp ACTCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAAAGAAACTGGCAGGGATaGCCACCACAGCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TLQSCKAVYIISTLQFKKRNWQG*PPQPQQ
Trigger: CTGCTGGGGCTGTGGTGGGCATCCCTGCCAGTTTCT...TTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp CAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACAAAGGTGCGCAGGGCCAGGTTaGCCGACAGAAGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: QSCKAVYIISTLQFKKQRCAGPG*PTEASH
Trigger: ATGAGAAGCTTCTGTCGGGCAACCTGGCCCTGCGCA...CCTTTGTTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp TTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATCTTGCAAGGCTCTGTTTATTTACAGTaGACCCTTTGTGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LCQALMFMTLPNSTILQGSVYLQ*TLCARP
Trigger: GGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGA...GCCTTGCAAGATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp GCTGCACTAAACATGGTAGGCTGGTTGTCCCTTTCTCTTCAGTTAGCTGGAGGGGACCTGAACACCTTATaGCATTTAGGAGCACTAACA +
Preference number: 4 (lower is better)
Translates to: AALNMVGWLSLSLQLAGGDLNTL*HLGALT
Trigger: TGTTAGTGCTCCTAAATGGCATAAGGTGTTCAGGTC...CCCTCCAGCTAACTGAAGAGAAAGGGACAACCAGCCTACCATGTTTAGTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR GCA 90 bp TGCACTAAACATGGTAGGCTGGTTGTCCCTTTCTCTTCAGTTAGCTGGAGGGGTGAGTTCTCTGGAAATTaGTGGTATTTGGGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: CTKHGRLVVPFSSVSWRGEFSGN*WYLGSN
Trigger: GTTGCTGCCCAAATACCAGCAATTTCCAGAGAACTC...ACCCCTCCAGCTAACTGAAGAGAAAGGGACAACCAGCCTACCATGTTTAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR CCA 90 bp GGATGTCTGTTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACGGTGTCTGCACAAGCTaGAAGTGTCCTTGTGATGAG +
Preference number: 4 (lower is better)
Translates to: GCLFIYSAPFVPGPYVHDGVCTS*KCPCDE
Trigger: CTCATCACAAGGACACTTCCAGCTTGTGCAGACACC...GTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGACATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp TTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAAGACTCAATGGCAGGGTaGTGTCTGCACAAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: FIYSAPFVPGPYVHDLTQDSMAG*CLHKLE
Trigger: TTCCAGCTTGTGCAGACACCACCCTGCCATTGAGTC...TTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp TGTGTCCTCTGCTTTCAGCTGCTGCCAAGTACCTTCCAGAAGATGCCAACTGATGAAATTGCTGGTATTTaGGCAGCAACTCCAAGACCT +
Preference number: 4 (lower is better)
Translates to: CVLCFQLLPSTFQKMPTDEIAGI*AATPRP
Trigger: AGGTCTTGGAGTTGCTGCCCAAATACCAGCAATTTC...ATCAGTTGGCATCTTCTGGAAGGTACTTGGCAGCAGCTGAAAGCAGAGGACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR CCA 90 bp TGCACTAAACATGGTAGGCTGGTTGTCCCTTTCTCTTCAGTTAGCTGGAGGGGTTTCTCTGGAAATTGCTaGTATTTGGGCAGCAACTCC +
Preference number: 4 (lower is better)
Translates to: CTKHGRLVVPFSSVSWRGFSGNC*YLGSNS
Trigger: GGAGTTGCTGCCCAAATACCAGCAATTTCCAGAGAA...ACCCCTCCAGCTAACTGAAGAGAAAGGGACAACCAGCCTACCATGTTTAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR CCA 90 bp TTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATCTTGCAAGGCACGCAGGGTACCGCTTaGCCTATCTTAATCAAGAAC +
Preference number: 4 (lower is better)
Translates to: LCQALMFMTLPNSTILQGTQGTA*PILIKN
Trigger: GTTCTTGATTAAGATAGGCCAAGCGGTACCCTGCGT...GCCTTGCAAGATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424086.5
CDS-3UTR TCA 90 bp TTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTTGTAGCAATGGCCTaGAGGAACACCTATGTCCTG +
Preference number: 4 (lower is better)
Translates to: FIYSAPFVPGPYVHDLTQLVAMA*RNTYVL
Trigger: CAGGACATAGGTGTTCCTTCAGGCCATTGCTACAAG...TTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp ACCCAACTCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAACTCCAAACAGGCCTaGACAGGAACCCACCAAGAG +
Preference number: 4 (lower is better)
Translates to: TQLYNLARRFTSSPLYSSNSKQA*TGTHQE
Trigger: CTCTTGGTGGGTTCCTGTGCAGGCCTGTTTGGAGTT...TGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGTTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp ACCCAACTCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAGAGTCTTGGGAAGCCTaGACTCACAGGTTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: TQLYNLARRFTSSPLYSSESWEA*THRLEG
Trigger: ACCTTCCAACCTGTGAGTGCAGGCTTCCCAAGACTC...TGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGTTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp TTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTGTTTATTTACAGTaGACCCTTTGTGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LFTVHPLCQALMFMTLPNSVYLQ*TLCARP
Trigger: GGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGA...GTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp AAAAAGTTACTTCTAACCCAGCATGAGGAAAAGGGCTATGGAGTCCACAGTATACCTTTCCTCAGCTGGTaGCTCCTAGAGCTCCATGAC +
Preference number: 4 (lower is better)
Translates to: KKLLLTQHEEKGYGVHSIPFLSW*LLELHD
Trigger: GTCATGGAGCTCTAGGAGGCACCAGCTGAGGAAAGG...TATACTGTGGACTCCATAGCCCTTTTCCTCATGCTGGGTTAGAAGTAACTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR GCA 90 bp TTACTTCTAACCCAGCATGAGGAAAAGGGCTATGGAGTCCACAGTATAAGTCTGGTACCTTCCAGAAGATaGCAACTGATAGCCACTGGG +
Preference number: 4 (lower is better)
Translates to: LLLTQHEEKGYGVHSISLVPSRR*QLIATG
Trigger: CCCAGTGGCTATCAGTTGGCATCTTCTGGAAGGTAC...CAGACTTATACTGTGGACTCCATAGCCCTTTTCCTCATGCTGGGTTAGAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR GCA 90 bp TTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACGAGCAACGAATGAGTTaGCGCAAACAAAAACGCAGG +
Preference number: 4 (lower is better)
Translates to: LFTVHPLCQALMFMTLPNEQRMS*RKQKRR
Trigger: CCTGCGTTTTTGTTTGCGGCAACTCATTCGTTGCTC...GTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424086.5
CDS-3UTR CCA 90 bp ACCCAACTCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAGGATCCGGGAAGAGGTaGTACGAGATTGGAACTCCA +
Preference number: 4 (lower is better)
Translates to: TQLYNLARRFTSSPLYSSGSGKR*YEIGTP
Trigger: TGGAGTTCCAATCTCGTACCACCTCTTCCCGGATCC...TGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGTTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp ACCCAACTCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCACCTGCACTCACAGGTTaGAAGGTGAAGGTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: TQLYNLARRFTSSPLYSSPALTG*KVKVVK
Trigger: CTTCACCACCTTCACCTTCCAACCTGTGAGTGCAGG...TGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGTTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp TTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATCTTGCAAGGCTGTATGACCACGGGATaGTTAGTGTTGATCACTAGG +
Preference number: 4 (lower is better)
Translates to: LCQALMFMTLPNSTILQGCMTTG*LVLITR
Trigger: CCTAGTGATCAACACTAACCATCCCGTGGTCATACA...GCCTTGCAAGATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp CAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACAAAGGGGACGATGTTCCCGCTaGGTGTATACAGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QSCKAVYIISTLQFKKQRGRCSR*VYTASP
Trigger: GGGAGAAGCTGTATACACCCAGCGGGAACATCGTCC...CCTTTGTTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp CAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACAAAGGTTCGGAACAAGTGTCTaGGGACGATGTTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: QSCKAVYIISTLQFKKQRFGTSV*GRCSRW
Trigger: CCAGCGGGAACATCGTCCCCAGACACTTGTTCCGAA...CCTTTGTTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp ACCCAACTCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAGACTCAATGGCAGGGTaGTGTCTGCACAAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: TQLYNLARRFTSSPLYSSDSMAG*CLHKLE
Trigger: TTCCAGCTTGTGCAGACACCACCCTGCCATTGAGTC...TGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGTTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp AAAAAGTTACTTCTAACCCAGCATGAGGAAAAGGGCTATGGAGTCCACAGTATATCCCCTTTCCTCAGCTaGTGCCTCCTAGAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: KKLLLTQHEEKGYGVHSISPFLS*CLLELH
Trigger: ATGGAGCTCTAGGAGGCACCAGCTGAGGAAAGGGGA...TATACTGTGGACTCCATAGCCCTTTTCCTCATGCTGGGTTAGAAGTAACTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR TCA 90 bp AGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATTGTAGGGTAAATGTTTaGTTCGGAACAAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SAPFVPGPYVHDLTQLYNCRVNV*FGTSVW
Trigger: CCAGACACTTGTTCCGAATCAAACATTTACCCTACA...ATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp CAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACAAAGGCATGAGTGTAGTCACTaGGGACAATCGGGTCGCATC +
Preference number: 4 (lower is better)
Translates to: QSCKAVYIISTLQFKKQRHECSH*GQSGRI
Trigger: GATGCGACCCGATTGTCCGCAGTGACTACACTCATG...CCTTTGTTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272521.7
CDS-3UTR GCA 90 bp CAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACAAAGGGCACGGCAGTGGTACTaGTTTCCAGGTACACCACTT +
Preference number: 4 (lower is better)
Translates to: QSCKAVYIISTLQFKKQRARQWY*FPGTPL
Trigger: AAGTGGTGTACCTGGAAAGCAGTACCACTGCCGTGC...CCTTTGTTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR GCA 90 bp GGAGGGATGTCTGTTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCACATGAGTGTAGTCACTaGGGACAATTGTATTCCTGT +
Preference number: 4 (lower is better)
Translates to: GGMSVYLQCTLCARPLCSHECSH*GQLYSC
Trigger: ACAGGAATACAATTGTCCGCAGTGACTACACTCATG...TGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGACATCCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424086.5
CDS-3UTR CCA 90 bp TTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAAAAGAAAGGAAAGGTCTaGACCAAAGTCCAACGTCCC +
Preference number: 4 (lower is better)
Translates to: FIYSAPFVPGPYVHDLTQKKGKV*TKVQRP
Trigger: GGGACGTTGGACTTTGGTCCAGACCTTTCCTTTCTT...TTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424086.5
CDS-3UTR TCA 90 bp CAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACAAAGGCTTGTAGCAATGGCCTaGAGGAACACCTATGTCCTG +
Preference number: 4 (lower is better)
Translates to: QSCKAVYIISTLQFKKQRLVAMA*RNTYVL
Trigger: CAGGACATAGGTGTTCCTTCAGGCCATTGCTACAAG...CCTTTGTTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR TCA 90 bp AAGTTACTTCTAACCCAGCATGAGGAAAAGGGCTATGGAGTCCACAGTATAAGTACTTCTAACCCAGCATaGGGAAAAGGGCTATGGAGT +
Preference number: 4 (lower is better)
Translates to: KLLLTQHEEKGYGVHSISTSNPA*GKGLWS
Trigger: ACTCCATAGCCCTTTTCCTCATGCTGGGTTAGAAGT...ACTTATACTGTGGACTCCATAGCCCTTTTCCTCATGCTGGGTTAGAAGTAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR GCA 90 bp TTACTTCTAACCCAGCATGAGGAAAAGGGCTATGGAGTCCACAGTATAAGTCTGTTAAAGCCTACTATATaGCCTCACCAGGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: LLLTQHEEKGYGVHSISLLKPTI*PHQAPH
Trigger: ATGTGGAGCCTGGTGAGGGCATATAGTAGGCTTTAA...CAGACTTATACTGTGGACTCCATAGCCCTTTTCCTCATGCTGGGTTAGAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR GCA 90 bp CTCCAAGACCTGAACACCTTATGCCATTTAGGAGCACTAACATTTAGAAAATCAGCCACATGTGTCCTCTaGTTTCAGCTGCTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: LQDLNTLCHLGALTFRKSATCVL*FQLLPS
Trigger: ACTTGGCAGCAGCTGAAAGCAGAGGACACATGTGGC...TGATTTTCTAAATGTTAGTGCTCCTAAATGGCATAAGGTGTTCAGGTCTTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR CCA 90 bp ACTCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAATCCTGTAGCACCTCTTaGAAGAGGCTCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: TLQSCKAVYIISTLQFKKSCSTS*KRLCSC
Trigger: ACAGCTGCAGAGCCTCTTCCAAGAGGTGCTACAGGA...TTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp CTCCAAGACCTGAACACCTTATGCCATTTAGGAGCACTAACATTTAGAAAATCATCCTGTAGCACCTCTTaGAAGAGGCTCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LQDLNTLCHLGALTFRKSSCSTS*KRLCSC
Trigger: ACAGCTGCAGAGCCTCTTCCAAGAGGTGCTACAGGA...TGATTTTCTAAATGTTAGTGCTCCTAAATGGCATAAGGTGTTCAGGTCTTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR TCA 90 bp TTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAATGTAGGGTAAATGTTTaGTTCGGAACAAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: FIYSAPFVPGPYVHDLTQCRVNV*FGTSVW
Trigger: CCAGACACTTGTTCCGAATCAAACATTTACCCTACA...TTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR TCA 90 bp TTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTTGTATTCCTGTCCGTaGAAAGTGCTTAATGAGCAA +
Preference number: 4 (lower is better)
Translates to: LFTVHPLCQALMFMTLPNLYSCP*KVLNEQ
Trigger: TTGCTCATTAAGCACTTTTCACGGACAGGAATACAA...GTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424086.5
CDS-3UTR TCA 90 bp CTCCAAGACCTGAACACCTTATGCCATTTAGGAGCACTAACATTTAGAAAATCATTCTTCACCTTTCTGTaGTGTTCCCTTTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LQDLNTLCHLGALTFRKSFFTFL*CSLSGW
Trigger: CCAACCTGAAAGGGAACATCACAGAAAGGTGAAGAA...TGATTTTCTAAATGTTAGTGCTCCTAAATGGCATAAGGTGTTCAGGTCTTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR TCA 90 bp ACCCAACTCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCATTAATGAGCAACGAATaGGTTGCCGCAAACAAAAAC +
Preference number: 4 (lower is better)
Translates to: TQLYNLARRFTSSPLYSSLMSNE*VAANKN
Trigger: GTTTTTGTTTGCGGCAACTCATTCGTTGCTCATTAA...TGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424086.5
CDS-3UTR CCA 90 bp TCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACATGTATGACCACGGGATaGTTAGTGTTGATCACTAGG +
Preference number: 4 (lower is better)
Translates to: STILQGGLHHLHFTVQETCMTTG*LVLITR
Trigger: CCTAGTGATCAACACTAACCATCCCGTGGTCATACA...TGTTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CCA 90 bp ACTCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAATGTATGACCACGGGATaGTTAGTGTTGATCACTAGG +
Preference number: 4 (lower is better)
Translates to: TLQSCKAVYIISTLQFKKCMTTG*LVLITR
Trigger: CCTAGTGATCAACACTAACCATCCCGTGGTCATACA...TTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS GCA 90 bp TACCGGGTCGCATCAGGCCGGAGAAGGGTCCCTCCCGCTCGTCCGTaGGCTCACCTCCGCCGCCGCTCGGAACGCCTACATGTGCGCGCG +
Preference number: 5 (lower is better)
Translates to: YRVASGRRRVPPARP*AHLRRRSERLHVRA
Trigger: CGCGCGCACATGTAGGCGTTCCGAGCGGCGGCGGAGGTGAGCGCACGGACGAGCGGGAGGGACCCTTCTCCGGCCTGATGCGACCCGGTA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424086.5
CDS CCA 90 bp CAGCCCGTAAATTCATGGGGCCTGCATGGAGCCCCAGGGTGTACTTaGCACCCACGCCCAGTGCCCAGGTCCCTGCCAGGCAAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: QPVNSWGLHGAPGCT*HPRPVPRSLPGKLG
Trigger: CCCCAGCTTGCCTGGCAGGGACCTGGGCACTGGGCGTGGGTGCCAAGTACACCCTGGGGCTCCATGCAGGCCCCATGAATTTACGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS TCA 90 bp TCCTCGCTACGCTTCCACTCTGGGCCCCTAGGCTACTCCGCAGTCTaGACGCGTTACCGGGTCGCATCAGGCCGGAGAAGGGTCCCTCCC +
Preference number: 5 (lower is better)
Translates to: SSLRFHSGPLGYSAV*TRYRVASGRRRVPP
Trigger: GGGAGGGACCCTTCTCCGGCCTGATGCGACCCGGTAACGCGTTCAGACTGCGGAGTAGCCTAGGGGCCCAGAGTGGAAGCGTAGCGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424086.5
ENST00000445518.1
CDS GCA 90 bp CTGGGCTTCACGGGACAAGGTCAGGGAAGCTCTCAGCCGGGCGCCTaGTGGGCTCCGCCAGTCCACTGTATGCCCATGTATGACCACGGG +
Preference number: 5 (lower is better)
Translates to: LGFTGQGQGSSQPGA*WAPPVHCMPMYDHG
Trigger: CCCGTGGTCATACATGGGCATACAGTGGACTGGCGGAGCCCAGCAGGCGCCCGGCTGAGAGCTTCCCTGACCTTGTCCCGTGAAGCCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS TCA 90 bp AGAGGGAGGCCGTGCGGCGGTCCAGCCAGGACTCCACGGCATGAGTaGGAGAATCCTGGGAGAAGGCGTAGGCCACAAAGCCTGCCACTG +
Preference number: 5 (lower is better)
Translates to: RGRPCGGPARTPRHE*ENPGRRRRPQSLPL
Trigger: CAGTGGCAGGCTTTGTGGCCTACGCCTTCTCCCAGGATTCTCTCACTCATGCCGTGGAGTCCTGGCTGGACCGCCGCACGGCCTCCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS GCA 90 bp CTGCCAGGCAAGCTGGGGCCAGCAGGGCGTGCACGGCAGTGGTACTaGTTTCCAGGTACACCACTTCCCTGGCCAAGGCGAACTTCTGGG +
Preference number: 5 (lower is better)
Translates to: LPGKLGPAGRARQWY*FPGTPLPWPRRTSG
Trigger: CCCAGAAGTTCGCCTTGGCCAGGGAAGTGGTGTACCTGGAAAGCAGTACCACTGCCGTGCACGCCCTGCTGGCCCCAGCTTGCCTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS GCA 90 bp AGGAAAGGTCTGGACCAAAGTCCAACGTCCCTAGGGCCATCGCGCTaGGGGGTGGGCCTAGAACACAGTACCATGCAGCCCGCCGGTGGC +
Preference number: 5 (lower is better)
Translates to: RKGLDQSPTSLGPSR*GVGLEHSTMQPAGG
Trigger: GCCACCGGCGGGCTGCATGGTACTGTGTTCTAGGCCCACCCCGCAGCGCGATGGCCCTAGGGACGTTGGACTTTGGTCCAGACCTTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424086.5
ENST00000445518.1
CDS CCA 90 bp GGCTTCACGGGACAAGGTCAGGGAAGCTCTCAGCCGGGCGCCTGCTaGGCTCCGCCAGTCCACTGTATGCCCATGTATGACCACGGGATG +
Preference number: 5 (lower is better)
Translates to: GFTGQGQGSSQPGAC*APPVHCMPMYDHGM
Trigger: CATCCCGTGGTCATACATGGGCATACAGTGGACTGGCGGAGCCCAGCAGGCGCCCGGCTGAGAGCTTCCCTGACCTTGTCCCGTGAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS CCA 90 bp AGGTCCCTGCCAGGCAAGCTGGGGCCAGCAGGGCGTGCACGGCAGTaGTACTGCTTTCCAGGTACACCACTTCCCTGGCCAAGGCGAACT +
Preference number: 5 (lower is better)
Translates to: RSLPGKLGPAGRARQ*YCFPGTPLPWPRRT
Trigger: AGTTCGCCTTGGCCAGGGAAGTGGTGTACCTGGAAAGCAGTACCACTGCCGTGCACGCCCTGCTGGCCCCAGCTTGCCTGGCAGGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS CCA 90 bp GCTGCCACCAAGCTGAAGGCAGCCCGTAAATTCATGGGGCCTGCATaGAGCCCCAGGGTGTACTTGGCACCCACGCCCAGTGCCCAGGTC +
Preference number: 5 (lower is better)
Translates to: AATKLKAARKFMGPA*SPRVYLAPTPSAQV
Trigger: GACCTGGGCACTGGGCGTGGGTGCCAAGTACACCCTGGGGCTCCATGCAGGCCCCATGAATTTACGGGCTGCCTTCAGCTTGGTGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS TCA 90 bp AGCTGGAAGTGTCCTTGTGATGAGCCCATCAGGAGCGGCCCGGATTaGGCATCCCCCTCCACATCTGCAGCACAGAGTCCCGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: SWKCPCDEPIRSGPD*ASPSTSAAQSPGGW
Trigger: CCACCCGCCGGGACTCTGTGCTGCAGATGTGGAGGGGGATGCTCAATCCGGGCCGCTCCTGATGGGCTCATCACAAGGACACTTCCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS GCA 90 bp TGTCCTGTGTCTCTGCACAAATGCTGCGGTCCGCCACAGGGGACCTaGCATGAGTGTAGTCACTGCGGACAATCTCCGCCGCCGCTCGGA +
Preference number: 5 (lower is better)
Translates to: CPVSLHKCCGPPQGT*HECSHCGQSPPPLG
Trigger: TCCGAGCGGCGGCGGAGATTGTCCGCAGTGACTACACTCATGGCAGGTCCCCTGTGGCGGACCGCAGCATTTGTGCAGAGACACAGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401466.5
CDS GCA 90 bp TGTCCTGTGTCTCTGCACAAATGCTGCGGTCCGCCACAGGGGACCTaGCATGAGTGTAGTCACTGCGGACAATCGGGTCGCATCAGGCCG +
Preference number: 5 (lower is better)
Translates to: CPVSLHKCCGPPQGT*HECSHCGQSGRIRP
Trigger: CGGCCTGATGCGACCCGATTGTCCGCAGTGACTACACTCATGGCAGGTCCCCTGTGGCGGACCGCAGCATTTGTGCAGAGACACAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272521.7
ENST00000409951.1
CDS GCA 90 bp GGCAGGGATGCCCACCACAGCCCCAGCAGGGAGTCTTGGGAAGCCTaGACTCACAGGTTGGAAGGTGAAGGTGGTGAAGGGCTTGTAGCA +
Preference number: 5 (lower is better)
Translates to: GRDAHHSPSRESWEA*THRLEGEGGEGLVA
Trigger: TGCTACAAGCCCTTCACCACCTTCACCTTCCAACCTGTGAGTGCAGGCTTCCCAAGACTCCCTGCTGGGGCTGTGGTGGGCATCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
ENST00000445518.1
CDS CCA 90 bp GTACTGCTTTCCAGGTACACCACTTCCCTGGCCAAGGCGAACTTCTaGGCTTCACGGGACAAGGTCAGGGAAGCTCTCAGCCGGGCGCCT +
Preference number: 5 (lower is better)
Translates to: VLLSRYTTSLAKANF*ASRDKVREALSRAP
Trigger: AGGCGCCCGGCTGAGAGCTTCCCTGACCTTGTCCCGTGAAGCCCAGAAGTTCGCCTTGGCCAGGGAAGTGGTGTACCTGGAAAGCAGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS CCA 90 bp GGGCGTGCACGGCAGTGGTACTGCTTTCCAGGTACACCACTTCCCTaGCCAAGGCGAACTTCTGGGCTTCACGGGACAAGGTCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: GRARQWYCFPGTPLP*PRRTSGLHGTRSGK
Trigger: CTTCCCTGACCTTGTCCCGTGAAGCCCAGAAGTTCGCCTTGGCCAGGGAAGTGGTGTACCTGGAAAGCAGTACCACTGCCGTGCACGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS GCA 90 bp ACAGGAACCCACCAAGAGGCCTGTCCTGTGTCTCTGCACAAATGCTaGGGTCCGCCACAGGGGACCTGCCATGAGTGTAGTCACTGCGGA +
Preference number: 5 (lower is better)
Translates to: TGTHQEACPVSLHKC*GPPQGTCHECSHCG
Trigger: TCCGCAGTGACTACACTCATGGCAGGTCCCCTGTGGCGGACCGCAGCATTTGTGCAGAGACACAGGACAGGCCTCTTGGTGGGTTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000409951.1
ENST00000424086.5
ENST00000445518.1
CDS GCA 90 bp TGCACAGGAACCCACCAAGAGGCCTGTCCTGTGTCTCTGCACAAATaGTGCGGTCCGCCACAGGGGACCTGCCATGAGTGTAGTCACTGC +
Preference number: 5 (lower is better)
Translates to: CTGTHQEACPVSLHK*CGPPQGTCHECSHC
Trigger: GCAGTGACTACACTCATGGCAGGTCCCCTGTGGCGGACCGCAGCATTTGTGCAGAGACACAGGACAGGCCTCTTGGTGGGTTCCTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000409951.1
ENST00000424086.5
ENST00000445518.1
CDS GCA 90 bp AACAGGCCTGCACAGGAACCCACCAAGAGGCCTGTCCTGTGTCTCTaGACAAATGCTGCGGTCCGCCACAGGGGACCTGCCATGAGTGTA +
Preference number: 5 (lower is better)
Translates to: NRPAQEPTKRPVLCL*TNAAVRHRGPAMSV
Trigger: TACACTCATGGCAGGTCCCCTGTGGCGGACCGCAGCATTTGTGCAGAGACACAGGACAGGCCTCTTGGTGGGTTCCTGTGCAGGCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000409951.1
ENST00000424086.5
ENST00000445518.1
CDS GCA 90 bp TGGGGACGATGTTCCCGCTGGGTGTATACAGCTTCTCCCCGTCTTTaGCCAAGAGACTGCGCAGGGCCAGGTTGCCCGACAGAAGCTTCT +
Preference number: 5 (lower is better)
Translates to: WGRCSRWVYTASPRL*PRDCAGPGCPTEAS
Trigger: AGAAGCTTCTGTCGGGCAACCTGGCCCTGCGCAGTCTCTTGGGCAAAGACGGGGAGAAGCTGTATACACCCAGCGGGAACATCGTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS CCA 90 bp CAAGAAACTGGCAGGGATGCCCACCACAGCCCCAGCAGGGAGTCTTaGGAAGCCTGCACTCACAGGTTGGAAGGTGAAGGTGGTGAAGGG +
Preference number: 5 (lower is better)
Translates to: QETGRDAHHSPSRES*EACTHRLEGEGGEG
Trigger: CCCTTCACCACCTTCACCTTCCAACCTGTGAGTGCAGGCTTCCCAAGACTCCCTGCTGGGGCTGTGGTGGGCATCCCTGCCAGTTTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
ENST00000445518.1
CDS GCA 90 bp GAAGCTCTCAGCCGGGCGCCTGCTGGGCTCCGCCAGTCCACTGTATaGCCATGTATGACCACGGGATGGTTAGTGTTGATCACTAGGTCT +
Preference number: 5 (lower is better)
Translates to: EALSRAPAGLRQSTV*PCMTTGWLVLITRS
Trigger: AGACCTAGTGATCAACACTAACCATCCCGTGGTCATACATGGGCATACAGTGGACTGGCGGAGCCCAGCAGGCGCCCGGCTGAGAGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS GCA 90 bp AAAGGCTCCAACAGGGCCCTCCAGACTCAATGGCAGGGTGGTGTCTaGACAAGCTGGAAGTGTCCTTGTGATGAGCCCATCAGGAGCGGC +
Preference number: 5 (lower is better)
Translates to: KGSNRALQTQWQGGV*TSWKCPCDEPIRSG
Trigger: GCCGCTCCTGATGGGCTCATCACAAGGACACTTCCAGCTTGTGCAGACACCACCCTGCCATTGAGTCTGGAGGGCCCTGTTGGAGCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp TTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCAACCCCAGCAGGGAGTCTaGGGAAGCCTGCACTCACAG +
Preference number: 5 (lower is better)
Translates to: FLAVSYRSKGSNRALQTQPQQGV*GSLHSQ
Trigger: CTGTGAGTGCAGGCTTCCCAAGACTCCCTGCTGGGG...TTGAGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS GCA 90 bp ACAGCTTCTCCCCGTCTTTGCCCAAGAGACTGCGCAGGGCCAGGTTaGCCGACAGAAGCTTCTCATAGAACTCCACTCCACCACAGGCAT +
Preference number: 5 (lower is better)
Translates to: TASPRLCPRDCAGPG*PTEASHRTPLHHRH
Trigger: ATGCCTGTGGTGGAGTGGAGTTCTATGAGAAGCTTCTGTCGGGCAACCTGGCCCTGCGCAGTCTCTTGGGCAAAGACGGGGAGAAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS GCA 90 bp TCCCGCTGGGTGTATACAGCTTCTCCCCGTCTTTGCCCAAGAGACTaGGCAGGGCCAGGTTGCCCGACAGAAGCTTCTCATAGAACTCCA +
Preference number: 5 (lower is better)
Translates to: SRWVYTASPRLCPRD*AGPGCPTEASHRTP
Trigger: TGGAGTTCTATGAGAAGCTTCTGTCGGGCAACCTGGCCCTGCGCAGTCTCTTGGGCAAAGACGGGGAGAAGCTGTATACACCCAGCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS GCA 90 bp GGGATCCGGGAAGAGGTGGTACGAGATTGGAACTCCAAACAGGCCTaGACAGGAACCCACCAAGAGGCCTGTCCTGTGTCTCTGCACAAA +
Preference number: 5 (lower is better)
Translates to: GIREEVVRDWNSKQA*TGTHQEACPVSLHK
Trigger: TTTGTGCAGAGACACAGGACAGGCCTCTTGGTGGGTTCCTGTGCAGGCCTGTTTGGAGTTCCAATCTCGTACCACCTCTTCCCGGATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000409951.1
ENST00000424086.5
ENST00000445518.1
CDS-3UTR CAA 90 bp ATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCAGCCCCAGGGTGTACTaGGCACCCACGCCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: IYSAPFVPGPYVHDLTQLSPRVY*APTPSA
Trigger: GGCACTGGGCGTGGGTGCCAAGTACACCCTGGGGCT...GAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp CCAAAGCCAGTGATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGCTGCGCAGGGCCAGGTaGCCCGACAGAAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: PKPVIFLAVSYRSKGSNRLRRAR*PDRSFS
Trigger: TGAGAAGCTTCTGTCGGGCAACCTGGCCCTGCGCAG...CCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAATCACTGGCTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS CCA 90 bp GCTGGGCTCCGCCAGTCCACTGTATGCCCATGTATGACCACGGGATaGTTAGTGTTGATCACTAGGTCTCCCAAGAAACTGGCAGGGATG +
Preference number: 5 (lower is better)
Translates to: AGLRQSTVCPCMTTG*LVLITRSPKKLAGM
Trigger: CATCCCTGCCAGTTTCTTGGGAGACCTAGTGATCAACACTAACCATCCCGTGGTCATACATGGGCATACAGTGGACTGGCGGAGCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp AGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATCAGGAGCGGCCCGGATaGAGCATCCCCCTCCACATC +
Preference number: 5 (lower is better)
Translates to: SAPFVPGPYVHDLTQLYNQERPG*SIPLHI
Trigger: GATGTGGAGGGGGATGCTCAATCCGGGCCGCTCCTG...ATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp ATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTGCCTGCACTCACAGGTaGGAAGGTGAAGGTGGTGAA +
Preference number: 5 (lower is better)
Translates to: IFLAVSYRSKGSNRALQTACTHR*EGEGGE
Trigger: TTCACCACCTTCACCTTCCAACCTGTGAGTGCAGGC...AGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp GGAGGGATGTCTGTTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCACCCCAGCAGGGAGTCTaGGGAAGCCTGCACTCACAG +
Preference number: 5 (lower is better)
Translates to: GGMSVYLQCTLCARPLCSPQQGV*GSLHSQ
Trigger: CTGTGAGTGCAGGCTTCCCAAGACTCCCTGCTGGGG...TGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGACATCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp ATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCCCCCAGCAGGGAGTCTaGGGAAGCCTGCACTCACAG +
Preference number: 5 (lower is better)
Translates to: IYSAPFVPGPYVHDLTQLPQQGV*GSLHSQ
Trigger: CTGTGAGTGCAGGCTTCCCAAGACTCCCTGCTGGGG...GAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp CAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACAAAGGAGCCCCAGGGTGTACTaGGCACCCACGCCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: QSCKAVYIISTLQFKKQRSPRVY*APTPSA
Trigger: GGCACTGGGCGTGGGTGCCAAGTACACCCTGGGGCT...CCTTTGTTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp TTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTGCGCAGGGCCAGGTaGCCCGACAGAAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: FIYSAPFVPGPYVHDLTQLRRAR*PDRSFS
Trigger: TGAGAAGCTTCTGTCGGGCAACCTGGCCCTGCGCAG...TTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp GGATGTCTGTTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACGTACTGGTAGAGCCATaGGACCACGGGATCCGGGAA +
Preference number: 5 (lower is better)
Translates to: GCLFIYSAPFVPGPYVHDVLVEP*DHGIRE
Trigger: TTCCCGGATCCCGTGGTCCAATGGCTCTACCAGTAC...GTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp ATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCGCCTGCACTCACAGGTaGGAAGGTGAAGGTGGTGAA +
Preference number: 5 (lower is better)
Translates to: IYSAPFVPGPYVHDLTQLACTHR*EGEGGE
Trigger: TTCACCACCTTCACCTTCCAACCTGTGAGTGCAGGC...GAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp TCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACAAGCCCCAGGGTGTACTaGGCACCCACGCCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: STILQGGLHHLHFTVQETSPRVY*APTPSA
Trigger: GGCACTGGGCGTGGGTGCCAAGTACACCCTGGGGCT...TGTTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp CAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACAAAGGCAGGAGCGGCCCGGATaGAGCATCCCCCTCCACATC +
Preference number: 5 (lower is better)
Translates to: QSCKAVYIISTLQFKKQRQERPG*SIPLHI
Trigger: GATGTGGAGGGGGATGCTCAATCCGGGCCGCTCCTG...CCTTTGTTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp TTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCAACCCAACTCTACAATCTaGCAAGGCGGTTTACATCAT +
Preference number: 5 (lower is better)
Translates to: FLAVSYRSKGSNRALQTQPNSTI*QGGLHH
Trigger: ATGATGTAAACCGCCTTGCAAGATTGTAGAGTTGGG...TTGAGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp TCCCTTTCTCTTCAGTTAGCTGGAGGGGTCTCCTCGGAAGTTCTGCTCAGTGACCGAGTTCTCTGGAAATaGCTGGTATTTGGGCAGCAA +
Preference number: 5 (lower is better)
Translates to: SLSLQLAGGVSSEVLLSDRVLWK*LVFGQQ
Trigger: TTGCTGCCCAAATACCAGCAATTTCCAGAGAACTCG...GTCACTGAGCAGAACTTCCGAGGAGACCCCTCCAGCTAACTGAAGAGAAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR CAA 90 bp ATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCAGAGGTGGTACGAGATaGGAACTCCAAACAGGCCTG +
Preference number: 5 (lower is better)
Translates to: IYSAPFVPGPYVHDLTQLRGGTR*ELQTGL
Trigger: CAGGCCTGTTTGGAGTTCCAATCTCGTACCACCTCT...GAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp GGATGTCTGTTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACGCCTGCACTCACAGGTaGGAAGGTGAAGGTGGTGAA +
Preference number: 5 (lower is better)
Translates to: GCLFIYSAPFVPGPYVHDACTHR*EGEGGE
Trigger: TTCACCACCTTCACCTTCCAACCTGTGAGTGCAGGC...GTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp ATTTTTCTGGCCGTGAGCTATAGGTCCAAAGGCTCCAACAGGGCCCTCCAGACTCCCAACTCTACAATCTaGCAAGGCGGTTTACATCAT +
Preference number: 5 (lower is better)
Translates to: IFLAVSYRSKGSNRALQTPNSTI*QGGLHH
Trigger: ATGATGTAAACCGCCTTGCAAGATTGTAGAGTTGGG...AGTCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACGGCCAGAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp AGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATACGGGATGGTTAGTGTaGATCACTAGGTCTCCCAAG +
Preference number: 5 (lower is better)
Translates to: SAPFVPGPYVHDLTQLYNTGWLV*ITRSPK
Trigger: CTTGGGAGACCTAGTGATCAACACTAACCATCCCGT...ATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp AGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATTTTACAGTGCACCCTTaGTGCCAGGCCCTTATGTTC +
Preference number: 5 (lower is better)
Translates to: SAPFVPGPYVHDLTQLYNFTVHP*CQALMF
Trigger: GAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAA...ATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp ATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTTTACAGTGCACCCTTaGTGCCAGGCCCTTATGTTC +
Preference number: 5 (lower is better)
Translates to: IYSAPFVPGPYVHDLTQLFTVHP*CQALMF
Trigger: GAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAA...GAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp GCTGCACTAAACATGGTAGGCTGGTTGTCCCTTTCTCTTCAGTTAGCTGGAGGGAACATGGTAGGCTGGTaGTCCCTTTCTCTTCAGTTA +
Preference number: 5 (lower is better)
Translates to: AALNMVGWLSLSLQLAGGNMVGW*SLSLQL
Trigger: TAACTGAAGAGAAAGGGACAACCAGCCTACCATGTT...CCCTCCAGCTAACTGAAGAGAAAGGGACAACCAGCCTACCATGTTTAGTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR CAA 90 bp GGATGTCTGTTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACTTTACAGTGCACCCTTaGTGCCAGGCCCTTATGTTC +
Preference number: 5 (lower is better)
Translates to: GCLFIYSAPFVPGPYVHDFTVHP*CQALMF
Trigger: GAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAA...GTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAACAGACATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp TGCACTAAACATGGTAGGCTGGTTGTCCCTTTCTCTTCAGTTAGCTGGAGGGGTGCCAGCTTCAAATCCTaGTTCTGCCACTTACAAAGT +
Preference number: 5 (lower is better)
Translates to: CTKHGRLVVPFSSVSWRGASFKS*FCHLQS
Trigger: ACTTTGTAAGTGGCAGAACAAGGATTTGAAGCTGGC...ACCCCTCCAGCTAACTGAAGAGAAAGGGACAACCAGCCTACCATGTTTAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR CAA 90 bp TTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAAACGGGATGGTTAGTGTaGATCACTAGGTCTCCCAAG +
Preference number: 5 (lower is better)
Translates to: FIYSAPFVPGPYVHDLTQTGWLV*ITRSPK
Trigger: CTTGGGAGACCTAGTGATCAACACTAACCATCCCGT...TTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp AGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAACTCTACAATCCCAACTCTACAATCTaGCAAGGCGGTTTACATCAT +
Preference number: 5 (lower is better)
Translates to: SAPFVPGPYVHDLTQLYNPNSTI*QGGLHH
Trigger: ATGATGTAAACCGCCTTGCAAGATTGTAGAGTTGGG...ATTGTAGAGTTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS TCA 90 bp GACAATTGTATTCCTGTCCGTGAAAAGTGCTTAATGAGCAACGAATaGGTTGCCGCAAACAAAAACGCAGGGTACCGCTTGGCCTATCTT +
Preference number: 5 (lower is better)
Translates to: DNCIPVREKCLMSNE*VAANKNAGYRLAYL
Trigger: AAGATAGGCCAAGCGGTACCCTGCGTTTTTGTTTGCGGCAACTCATTCGTTGCTCATTAAGCACTTTTCACGGACAGGAATACAATTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424086.5
ENST00000445518.1
CDS-3UTR CAA 90 bp AAAAAGTTACTTCTAACCCAGCATGAGGAAAAGGGCTATGGAGTCCACAGTATAAGAGGTGGTACGAGATaGGAACTCCAAACAGGCCTG +
Preference number: 5 (lower is better)
Translates to: KKLLLTQHEEKGYGVHSIRGGTR*ELQTGL
Trigger: CAGGCCTGTTTGGAGTTCCAATCTCGTACCACCTCT...TATACTGTGGACTCCATAGCCCTTTTCCTCATGCTGGGTTAGAAGTAACTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS-3UTR CAA 90 bp CAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAACAAAGGAGAGGTGGTACGAGATaGGAACTCCAAACAGGCCTG +
Preference number: 5 (lower is better)
Translates to: QSCKAVYIISTLQFKKQRRGGTR*ELQTGL
Trigger: CAGGCCTGTTTGGAGTTCCAATCTCGTACCACCTCT...CCTTTGTTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp ACCCAACTCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAACGGGATGGTTAGTGTaGATCACTAGGTCTCCCAAG +
Preference number: 5 (lower is better)
Translates to: TQLYNLARRFTSSPLYSSTGWLV*ITRSPK
Trigger: CTTGGGAGACCTAGTGATCAACACTAACCATCCCGT...TGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGTTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp TTTATTTACAGTGCACCCTTTGTGCCAGGCCCTTATGTTCATGACCTTACCCAAAACGCAGGGTACCGCTaGGCCTATCTTAATCAAGAA +
Preference number: 5 (lower is better)
Translates to: FIYSAPFVPGPYVHDLTQNAGYR*AYLNQE
Trigger: TTCTTGATTAAGATAGGCCAAGCGGTACCCTGCGTT...TTGGGTAAGGTCATGAACATAAGGGCCTGGCACAAAGGGTGCACTGTAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424086.5
CDS-3UTR CAA 90 bp ACTCTACAATCTTGCAAGGCGGTTTACATCATCTCCACTTTACAGTTCAAGAAAAGAGGTGGTACGAGATaGGAACTCCAAACAGGCCTG +
Preference number: 5 (lower is better)
Translates to: TLQSCKAVYIISTLQFKKRGGTR*ELQTGL
Trigger: CAGGCCTGTTTGGAGTTCCAATCTCGTACCACCTCT...TTTCTTGAACTGTAAAGTGGAGATGATGTAAACCGCCTTGCAAGATTGTAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS-3UTR CAA 90 bp CTCCAAGACCTGAACACCTTATGCCATTTAGGAGCACTAACATTTAGAAAATCAGGAAATTGCTGGTATTaGGGCAGCAACTCCAAGACC +
Preference number: 5 (lower is better)
Translates to: LQDLNTLCHLGALTFRKSGNCWY*GSNSKT
Trigger: GGTCTTGGAGTTGCTGCCCAAATACCAGCAATTTCC...TGATTTTCTAAATGTTAGTGCTCCTAAATGGCATAAGGTGTTCAGGTCTTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409951.1
CDS GCA 72 bp GCATCAGGCCGGAGAAGGGTCCCTCCCGCTCGTCCGTaGGCTCACCTCCGCCGCCGCTCGGAACGCCTACAT +
Preference number: 6 (lower is better)
Translates to: ASGRRRVPPARP*AHLRRRSERLH
Trigger: ATGTAGGCGTTCCGAGCGGCGGCGGAGGTGAGCGCACGGACGAGCGGGAGGGACCCTTCTCCGGCCTGATGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424086.5
ENST00000445518.1
CDS CAA 90 bp GCAGCCCGTAAATTCATGGGGCCTGCATGGAGCCCCAGGGTGTACTaGGCACCCACGCCCAGTGCCCAGGTCCCTGCCAGGCAAGCTGGG +
Preference number: 6 (lower is better)
Translates to: AARKFMGPAWSPRVY*APTPSAQVPARQAG
Trigger: CCCAGCTTGCCTGGCAGGGACCTGGGCACTGGGCGTGGGTGCCAAGTACACCCTGGGGCTCCATGCAGGCCCCATGAATTTACGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS TCA 72 bp CGCTTCCACTCTGGGCCCCTAGGCTACTCCGCAGTCTaGACGCGTTACCGGGTCGCATCAGGCCGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: RFHSGPLGYSAV*TRYRVASGRRR
Trigger: CCTTCTCCGGCCTGATGCGACCCGGTAACGCGTTCAGACTGCGGAGTAGCCTAGGGGCCCAGAGTGGAAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424086.5
ENST00000445518.1
CDS GCA 72 bp ACGGGACAAGGTCAGGGAAGCTCTCAGCCGGGCGCCTaGTGGGCTCCGCCAGTCCACTGTATGCCCATGTAT +
Preference number: 6 (lower is better)
Translates to: TGQGQGSSQPGA*WAPPVHCMPMY
Trigger: ATACATGGGCATACAGTGGACTGGCGGAGCCCAGCAGGCGCCCGGCTGAGAGCTTCCCTGACCTTGTCCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS GCA 72 bp AAGCTGGGGCCAGCAGGGCGTGCACGGCAGTGGTACTaGTTTCCAGGTACACCACTTCCCTGGCCAAGGCGA +
Preference number: 6 (lower is better)
Translates to: KLGPAGRARQWY*FPGTPLPWPRR
Trigger: TCGCCTTGGCCAGGGAAGTGGTGTACCTGGAAAGCAGTACCACTGCCGTGCACGCCCTGCTGGCCCCAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS GCA 72 bp CTGGACCAAAGTCCAACGTCCCTAGGGCCATCGCGCTaGGGGGTGGGCCTAGAACACAGTACCATGCAGCCC +
Preference number: 6 (lower is better)
Translates to: LDQSPTSLGPSR*GVGLEHSTMQP
Trigger: GGGCTGCATGGTACTGTGTTCTAGGCCCACCCCGCAGCGCGATGGCCCTAGGGACGTTGGACTTTGGTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424086.5
ENST00000445518.1
CDS CCA 72 bp GGACAAGGTCAGGGAAGCTCTCAGCCGGGCGCCTGCTaGGCTCCGCCAGTCCACTGTATGCCCATGTATGAC +
Preference number: 6 (lower is better)
Translates to: GQGQGSSQPGAC*APPVHCMPMYD
Trigger: GTCATACATGGGCATACAGTGGACTGGCGGAGCCCAGCAGGCGCCCGGCTGAGAGCTTCCCTGACCTTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS CAA 90 bp AGGGAGCGGAGCTGGCTGGCCCTGAGGCCAGTACTGGTAGAGCCATaGGACCACGGGATCCGGGAAGAGGTGGTACGAGATTGGAACTCC +
Preference number: 6 (lower is better)
Translates to: RERSWLALRPVLVEP*DHGIREEVVRDWNS
Trigger: GGAGTTCCAATCTCGTACCACCTCTTCCCGGATCCCGTGGTCCAATGGCTCTACCAGTACTGGCCTCAGGGCCAGCCAGCTCCGCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000409951.1
ENST00000424086.5
ENST00000445518.1
CDS GCA 72 bp GCCCACCACAGCCCCAGCAGGGAGTCTTGGGAAGCCTaGACTCACAGGTTGGAAGGTGAAGGTGGTGAAGGG +
Preference number: 6 (lower is better)
Translates to: AHHSPSRESWEA*THRLEGEGGEG
Trigger: CCCTTCACCACCTTCACCTTCCAACCTGTGAGTGCAGGCTTCCCAAGACTCCCTGCTGGGGCTGTGGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
ENST00000445518.1
CDS CCA 72 bp GGCAGGGATGCCCACCACAGCCCCAGCAGGGAGTCTTaGGAAGCCTGCACTCACAGGTTGGAAGGTGAAGGT +
Preference number: 6 (lower is better)
Translates to: GRDAHHSPSRES*EACTHRLEGEG
Trigger: ACCTTCACCTTCCAACCTGTGAGTGCAGGCTTCCCAAGACTCCCTGCTGGGGCTGTGGTGGGCATCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
ENST00000445518.1
CDS TCA 72 bp TGTCCTTGTGATGAGCCCATCAGGAGCGGCCCGGATTaGGCATCCCCCTCCACATCTGCAGCACAGAGTCCC +
Preference number: 6 (lower is better)
Translates to: CPCDEPIRSGPD*ASPSTSAAQSP
Trigger: GGGACTCTGTGCTGCAGATGTGGAGGGGGATGCTCAATCCGGGCCGCTCCTGATGGGCTCATCACAAGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS GCA 72 bp TCTCTGCACAAATGCTGCGGTCCGCCACAGGGGACCTaGCATGAGTGTAGTCACTGCGGACAATCGGGTCGC +
Preference number: 6 (lower is better)
Translates to: SLHKCCGPPQGT*HECSHCGQSGR
Trigger: GCGACCCGATTGTCCGCAGTGACTACACTCATGGCAGGTCCCCTGTGGCGGACCGCAGCATTTGTGCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272521.7
ENST00000409951.1
CDS GCA 72 bp AGCCGGGCGCCTGCTGGGCTCCGCCAGTCCACTGTATaGCCATGTATGACCACGGGATGGTTAGTGTTGATC +
Preference number: 6 (lower is better)
Translates to: SRAPAGLRQSTV*PCMTTGWLVLI
Trigger: GATCAACACTAACCATCCCGTGGTCATACATGGGCATACAGTGGACTGGCGGAGCCCAGCAGGCGCCCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS GCA 72 bp TCTCTGCACAAATGCTGCGGTCCGCCACAGGGGACCTaGCATGAGTGTAGTCACTGCGGACAATCTCCGCCG +
Preference number: 6 (lower is better)
Translates to: SLHKCCGPPQGT*HECSHCGQSPP
Trigger: CGGCGGAGATTGTCCGCAGTGACTACACTCATGGCAGGTCCCCTGTGGCGGACCGCAGCATTTGTGCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401466.5
CDS CAA 72 bp AGCTGGCTGGCCCTGAGGCCAGTACTGGTAGAGCCATaGGACCACGGGATCCGGGAAGAGGTGGTACGAGAT +
Preference number: 6 (lower is better)
Translates to: SWLALRPVLVEP*DHGIREEVVRD
Trigger: ATCTCGTACCACCTCTTCCCGGATCCCGTGGTCCAATGGCTCTACCAGTACTGGCCTCAGGGCCAGCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000409951.1
ENST00000424086.5
ENST00000445518.1
CDS GCA 72 bp CCCCGTCTTTGCCCAAGAGACTGCGCAGGGCCAGGTTaGCCGACAGAAGCTTCTCATAGAACTCCACTCCAC +
Preference number: 6 (lower is better)
Translates to: PRLCPRDCAGPG*PTEASHRTPLH
Trigger: GTGGAGTGGAGTTCTATGAGAAGCTTCTGTCGGGCAACCTGGCCCTGCGCAGTCTCTTGGGCAAAGACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS CCA 72 bp CGGCAGTGGTACTGCTTTCCAGGTACACCACTTCCCTaGCCAAGGCGAACTTCTGGGCTTCACGGGACAAGG +
Preference number: 6 (lower is better)
Translates to: RQWYCFPGTPLP*PRRTSGLHGTR
Trigger: CCTTGTCCCGTGAAGCCCAGAAGTTCGCCTTGGCCAGGGAAGTGGTGTACCTGGAAAGCAGTACCACTGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS TCA 72 bp GCACAGAGTCCCGGCGGGTGGTGTAGGGTAAATGTTTaGTTCGGAACAAGTGTCTGGGGACGATGTTCCCGC +
Preference number: 6 (lower is better)
Translates to: AQSPGGWCRVNV*FGTSVWGRCSR
Trigger: GCGGGAACATCGTCCCCAGACACTTGTTCCGAATCAAACATTTACCCTACACCACCCGCCGGGACTCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS GCA 72 bp AACAGGGCCCTCCAGACTCAATGGCAGGGTGGTGTCTaGACAAGCTGGAAGTGTCCTTGTGATGAGCCCATC +
Preference number: 6 (lower is better)
Translates to: NRALQTQWQGGV*TSWKCPCDEPI
Trigger: GATGGGCTCATCACAAGGACACTTCCAGCTTGTGCAGACACCACCCTGCCATTGAGTCTGGAGGGCCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS CCA 72 bp TTGGACCACGGGATCCGGGAAGAGGTGGTACGAGATTaGAACTCCAAACAGGCCTGCACAGGAACCCACCAA +
Preference number: 6 (lower is better)
Translates to: LDHGIREEVVRD*NSKQACTGTHQ
Trigger: TTGGTGGGTTCCTGTGCAGGCCTGTTTGGAGTTCCAATCTCGTACCACCTCTTCCCGGATCCCGTGGTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000409951.1
ENST00000424086.5
ENST00000445518.1
CDS CAA 72 bp ATTGGACCACGGGATCCGGGAAGAGGTGGTACGAGATaGGAACTCCAAACAGGCCTGCACAGGAACCCACCA +
Preference number: 6 (lower is better)
Translates to: IGPRDPGRGGTR*ELQTGLHRNPP
Trigger: TGGTGGGTTCCTGTGCAGGCCTGTTTGGAGTTCCAATCTCGTACCACCTCTTCCCGGATCCCGTGGTCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000409951.1
ENST00000424086.5
ENST00000445518.1
CDS GCA 72 bp GAAGAGGTGGTACGAGATTGGAACTCCAAACAGGCCTaGACAGGAACCCACCAAGAGGCCTGTCCTGTGTCT +
Preference number: 6 (lower is better)
Translates to: EEVVRDWNSKQA*TGTHQEACPVS
Trigger: AGACACAGGACAGGCCTCTTGGTGGGTTCCTGTGCAGGCCTGTTTGGAGTTCCAATCTCGTACCACCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000409951.1
ENST00000424086.5
ENST00000445518.1
CDS GCA 72 bp TCTCTGCACAAATGCTGCGGTCCGCCACAGGGGACCTaGCATGAGTGTAGTCACTGCGGACAATTGTATTCC +
Preference number: 6 (lower is better)
Translates to: SLHKCCGPPQGT*HECSHCGQLYS
Trigger: GGAATACAATTGTCCGCAGTGACTACACTCATGGCAGGTCCCCTGTGGCGGACCGCAGCATTTGTGCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424086.5
ENST00000445518.1
CDS CAA 90 bp CGCCAGTCCACTGTATGCCCATGTATGACCACGGGATGGTTAGTGTaGATCACTAGGTCTCCCAAGAAACTGGCAGGGATGCCCACCACA +
Preference number: 6 (lower is better)
Translates to: RQSTVCPCMTTGWLV*ITRSPKKLAGMPTT
Trigger: TGTGGTGGGCATCCCTGCCAGTTTCTTGGGAGACCTAGTGATCAACACTAACCATCCCGTGGTCATACATGGGCATACAGTGGACTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS CCA 72 bp CGCCAGTCCACTGTATGCCCATGTATGACCACGGGATaGTTAGTGTTGATCACTAGGTCTCCCAAGAAACTG +
Preference number: 6 (lower is better)
Translates to: RQSTVCPCMTTG*LVLITRSPKKL
Trigger: CAGTTTCTTGGGAGACCTAGTGATCAACACTAACCATCCCGTGGTCATACATGGGCATACAGTGGACTGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS CAA 72 bp ACTGTATGCCCATGTATGACCACGGGATGGTTAGTGTaGATCACTAGGTCTCCCAAGAAACTGGCAGGGATG +
Preference number: 6 (lower is better)
Translates to: TVCPCMTTGWLV*ITRSPKKLAGM
Trigger: CATCCCTGCCAGTTTCTTGGGAGACCTAGTGATCAACACTAACCATCCCGTGGTCATACATGGGCATACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272521.7
ENST00000401466.5
ENST00000424086.5
CDS TCA 72 bp GAGTGTAGTCACTGCGGACAATTGTATTCCTGTCCGTaGAAAGTGCTTAATGAGCAACGAATGAGTTGCCGC +
Preference number: 6 (lower is better)
Translates to: ECSHCGQLYSCP*KVLNEQRMSCR
Trigger: GCGGCAACTCATTCGTTGCTCATTAAGCACTTTTCACGGACAGGAATACAATTGTCCGCAGTGACTACACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424086.5
ENST00000445518.1
CDS CCA 72 bp AATGAGTTGCCGCAAACAAAAACGCAGGGTACCGCTTaGCCTATCTTAATCAAGAACTCCTATAAGAATCAT +
Preference number: 6 (lower is better)
Translates to: NELPQTKTQGTA*PILIKNSYKNH
Trigger: ATGATTCTTATAGGAGTTCTTGATTAAGATAGGCCAAGCGGTACCCTGCGTTTTTGTTTGCGGCAACTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424086.5
ENST00000445518.1