Pregenerated sensors for TMEM171 (Homo sapiens)

Ensembl gene IDs: ENSG00000157111

Ensembl transcript IDs: ENST00000287773.5, ENST00000454765.7

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	ATCCGGGGCTCTGAGTCGCCAGTGTCTGTCTCGTTTAGCGGTTCCTaGGCCCAGTTGGAGCCACATCCAGGGACCCAAATGCCCAGGACG	+
Preference number: 5 (lower is better) Translates to: IRGSESPVSVSFSGS*AQLEPHPGTQMPRT Trigger: CGTCCTGGGCATTTGGGTCCCTGGATGTGGCTCCAACTGGGCGCAGGAACCGCTAAACGAGACAGACACTGGCGACTCAGAGCCCCGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287773.5 ENST00000454765.7
CDS CCA 90 bp	CCCGCCACCTTGAGCACCATGGGGCAGTCTGGGAGGGGCTTATATTaGCATGCCTGGAACCCAAAGATGGAGAGCAGGACTCCCACACAC	+
Preference number: 5 (lower is better) Translates to: PATLSTMGQSGRGLY*HAWNPKMESRTPTH Trigger: GTGTGTGGGAGTCCTGCTCTCCATCTTTGGGTTCCAGGCATGCCAATATAAGCCCCTCCCAGACTGCCCCATGGTGCTCAAGGTGGCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287773.5 ENST00000454765.7
CDS CCA 90 bp	GGCAGTCTGGGAGGGGCTTATATTGGCATGCCTGGAACCCAAAGATaGAGAGCAGGACTCCCACACACAACAAGACGGCGCCGAAGACAA	+
Preference number: 5 (lower is better) Translates to: GSLGGAYIGMPGTQR*RAGLPHTTRRRRRQ Trigger: TTGTCTTCGGCGCCGTCTTGTTGTGTGTGGGAGTCCTGCTCTCCATCTTTGGGTTCCAGGCATGCCAATATAAGCCCCTCCCAGACTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287773.5 ENST00000454765.7
CDS CCA 90 bp	CCGCTTGTCAAGAACAGAAACCCAAAGATAAGGCACTGGGCAAACTaGCGGCTCTCTCCACAGATGAAGGCTCGGTCGGGGTCCATCTGC	+
Preference number: 5 (lower is better) Translates to: PLVKNRNPKIRHWAN*RLSPQMKARSGSIC Trigger: GCAGATGGACCCCGACCGAGCCTTCATCTGTGGAGAGAGCCGCCAGTTTGCCCAGTGCCTTATCTTTGGGTTTCTGTTCTTGACAAGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287773.5 ENST00000454765.7
CDS GCA 90 bp	CACCTTGAGCACCATGGGGCAGTCTGGGAGGGGCTTATATTGGCATaGCTGGAACCCAAAGATGGAGAGCAGGACTCCCACACACAACAA	+
Preference number: 5 (lower is better) Translates to: HLEHHGAVWEGLILA*LEPKDGEQDSHTQQ Trigger: TTGTTGTGTGTGGGAGTCCTGCTCTCCATCTTTGGGTTCCAGGCATGCCAATATAAGCCCCTCCCAGACTGCCCCATGGTGCTCAAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287773.5 ENST00000454765.7
CDS CCA 90 bp	ATGAGCATGCCGCTTGTCAAGAACAGAAACCCAAAGATAAGGCACTaGGCAAACTGGCGGCTCTCTCCACAGATGAAGGCTCGGTCGGGG	+
Preference number: 5 (lower is better) Translates to: MSMPLVKNRNPKIRH*ANWRLSPQMKARSG Trigger: CCCCGACCGAGCCTTCATCTGTGGAGAGAGCCGCCAGTTTGCCCAGTGCCTTATCTTTGGGTTTCTGTTCTTGACAAGCGGCATGCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287773.5 ENST00000454765.7
CDS GCA 72 bp	TCGGTCGGGGTCCATCTGCTGACCTCTCTGCAGCCCTaGACGGAGCTGAAGTTGCGCCCGGGAGCGGGCCAG	+
Preference number: 6 (lower is better) Translates to: SVGVHLLTSLQP*TELKLRPGAGQ Trigger: CTGGCCCGCTCCCGGGCGCAACTTCAGCTCCGTGCAGGGCTGCAGAGAGGTCAGCAGATGGACCCCGACCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287773.5 ENST00000454765.7
CDS CAA 72 bp	CCAGTGTCTGTCTCGTTTAGCGGTTCCTGCGCCCAGTaGGAGCCACATCCAGGGACCCAAATGCCCAGGACG	+
Preference number: 6 (lower is better) Translates to: PVSVSFSGSCAQ*EPHPGTQMPRT Trigger: CGTCCTGGGCATTTGGGTCCCTGGATGTGGCTCCAACTGGGCGCAGGAACCGCTAAACGAGACAGACACTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287773.5 ENST00000454765.7
CDS CAA 90 bp	TCTGAGTCGCCAGTGTCTGTCTCGTTTAGCGGTTCCTGCGCCCAGTaGGAGCCACATCCAGGGACCCAAATGCCCAGGACGCTGATGAGC	+
Preference number: 6 (lower is better) Translates to: SESPVSVSFSGSCAQ*EPHPGTQMPRTLMS Trigger: GCTCATCAGCGTCCTGGGCATTTGGGTCCCTGGATGTGGCTCCAACTGGGCGCAGGAACCGCTAAACGAGACAGACACTGGCGACTCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287773.5 ENST00000454765.7
CDS GCA 72 bp	CACCATGGGGCAGTCTGGGAGGGGCTTATATTGGCATaGCTGGAACCCAAAGATGGAGAGCAGGACTCCCAC	+
Preference number: 6 (lower is better) Translates to: HHGAVWEGLILA*LEPKDGEQDSH Trigger: GTGGGAGTCCTGCTCTCCATCTTTGGGTTCCAGGCATGCCAATATAAGCCCCTCCCAGACTGCCCCATGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287773.5 ENST00000454765.7
CDS GCA 72 bp	TCTGAGTCGCCAGTGTCTGTCTCGTTTAGCGGTTCCTaGGCCCAGTTGGAGCCACATCCAGGGACCCAAATG	+
Preference number: 6 (lower is better) Translates to: SESPVSVSFSGS*AQLEPHPGTQM Trigger: CATTTGGGTCCCTGGATGTGGCTCCAACTGGGCGCAGGAACCGCTAAACGAGACAGACACTGGCGACTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287773.5 ENST00000454765.7
CDS CCA 72 bp	GGAGGGGCTTATATTGGCATGCCTGGAACCCAAAGATaGAGAGCAGGACTCCCACACACAACAAGACGGCGC	+
Preference number: 6 (lower is better) Translates to: GGAYIGMPGTQR*RAGLPHTTRRR Trigger: GCGCCGTCTTGTTGTGTGTGGGAGTCCTGCTCTCCATCTTTGGGTTCCAGGCATGCCAATATAAGCCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287773.5 ENST00000454765.7
CDS CCA 72 bp	ATGGGGCAGTCTGGGAGGGGCTTATATTGGCATGCCTaGAACCCAAAGATGGAGAGCAGGACTCCCACACAC	+
Preference number: 6 (lower is better) Translates to: MGQSGRGLYWHA*NPKMESRTPTH Trigger: GTGTGTGGGAGTCCTGCTCTCCATCTTTGGGTTCCAGGCATGCCAATATAAGCCCCTCCCAGACTGCCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287773.5 ENST00000454765.7
CDS CAA 72 bp	CTTGAGCACCATGGGGCAGTCTGGGAGGGGCTTATATaGGCATGCCTGGAACCCAAAGATGGAGAGCAGGAC	+
Preference number: 6 (lower is better) Translates to: LEHHGAVWEGLI*ACLEPKDGEQD Trigger: GTCCTGCTCTCCATCTTTGGGTTCCAGGCATGCCAATATAAGCCCCTCCCAGACTGCCCCATGGTGCTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287773.5 ENST00000454765.7
CDS CCA 72 bp	TTGAGCACCATGGGGCAGTCTGGGAGGGGCTTATATTaGCATGCCTGGAACCCAAAGATGGAGAGCAGGACT	+
Preference number: 6 (lower is better) Translates to: LSTMGQSGRGLY*HAWNPKMESRT Trigger: AGTCCTGCTCTCCATCTTTGGGTTCCAGGCATGCCAATATAAGCCCCTCCCAGACTGCCCCATGGTGCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287773.5 ENST00000454765.7
CDS CAA 72 bp	AAGACGGCGCCGAAGACAAAGAAGCAGAAGATGAGTTaGCTGACGTGTCTGTCCTGCTGGTCCCCATCTGGC	+
Preference number: 6 (lower is better) Translates to: KTAPKTKKQKMS*LTCLSCWSPSG Trigger: GCCAGATGGGGACCAGCAGGACAGACACGTCAGCAAACTCATCTTCTGCTTCTTTGTCTTCGGCGCCGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287773.5 ENST00000454765.7
CDS CAA 90 bp	ACACACAACAAGACGGCGCCGAAGACAAAGAAGCAGAAGATGAGTTaGCTGACGTGTCTGTCCTGCTGGTCCCCATCTGGCTCAGCAGCA	+
Preference number: 6 (lower is better) Translates to: THNKTAPKTKKQKMS*LTCLSCWSPSGSAA Trigger: TGCTGCTGAGCCAGATGGGGACCAGCAGGACAGACACGTCAGCAAACTCATCTTCTGCTTCTTTGTCTTCGGCGCCGTCTTGTTGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287773.5 ENST00000454765.7
CDS TCA 72 bp	ACTGTTAGTTCCAGGACTCTCAGCGACCGCAGAAGCTaGAGATTCAGGAAAGTAAGGTGGTGGAGGGGGTGG	+
Preference number: 6 (lower is better) Translates to: TVSSRTLSDRRS*RFRKVRWWRGW Trigger: CCACCCCCTCCACCACCTTACTTTCCTGAATCTTCAGCTTCTGCGGTCGCTGAGAGTCCTGGAACTAACAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000287773.5 ENST00000454765.7
CDS CCA 72 bp	CCGCTTGTCAAGAACAGAAACCCAAAGATAAGGCACTaGGCAAACTGGCGGCTCTCTCCACAGATGAAGGCT	+
Preference number: 6 (lower is better) Translates to: PLVKNRNPKIRH*ANWRLSPQMKA Trigger: AGCCTTCATCTGTGGAGAGAGCCGCCAGTTTGCCCAGTGCCTTATCTTTGGGTTTCTGTTCTTGACAAGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287773.5 ENST00000454765.7
CDS CCA 72 bp	ATCTGGATCTGTCCCTCTTCTCTCTCAGAGGCATCCTaGCCAGCATTCAGCGTGTTTCTCTTCTTAACATGG	+
Preference number: 6 (lower is better) Translates to: IWICPSSLSEAS*PAFSVFLFLTW Trigger: CCATGTTAAGAAGAGAAACACGCTGAATGCTGGCCAGGATGCCTCTGAGAGAGAAGAGGGACAGATCCAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287773.5 ENST00000454765.7

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