RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM170A (Homo sapiens)

Ensembl gene IDs: ENSG00000166822

Ensembl transcript IDs: ENST00000357613.8, ENST00000561878.2, ENST00000566980.1, ENST00000567796.1, ENST00000568559.1, ENST00000569276.1, ENST00000569540.5

Found 284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AATATGCGACATCTCACAGAATACTGTAAATTTCAGTGCAAAGGATaGCACCCCAGAGACACTGTTGACTTGGCTTGGGTAAAGGTACAC +
Preference number: 1 (lower is better)
Translates to: NMRHLTEYCKFQCKG*HPRDTVDLAWVKVH
Trigger: GTGTACCTTTACCCAAGCCAAGTCAACAGTGTCTCTGGGGTGGCATCCTTTGCACTGAAATTTACAGTATTCTGTGAGATGTCGCATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
3UTR TCA 90 bp GGCACCGATGCTTCACATTCCAGGAAATGGTTACTTAGGGAAGGTTaGTATGTGCTGCAGCATAATAGGAACTTAATTCAAACCAGAGCA +
Preference number: 1 (lower is better)
Translates to: GTDASHSRKWLLREG*YVLQHNRNLIQTRA
Trigger: TGCTCTGGTTTGAATTAAGTTCCTATTATGCTGCAGCACATATCAACCTTCCCTAAGTAACCATTTCCTGGAATGTGAAGCATCGGTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
3UTR GCA 90 bp TTTCTTCAAAATATGCGACATCTCACAGAATACTGTAAATTTCAGTaGAAAGGATGCCACCCCAGAGACACTGTTGACTTGGCTTGGGTA +
Preference number: 1 (lower is better)
Translates to: FLQNMRHLTEYCKFQ*KGCHPRDTVDLAWV
Trigger: TACCCAAGCCAAGTCAACAGTGTCTCTGGGGTGGCATCCTTTGCACTGAAATTTACAGTATTCTGTGAGATGTCGCATATTTTGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
3UTR CCA 90 bp TCCTGGCTATTTTTAATCAGAAGCCAGAGTGTGTATTGCTTTAAATaGAATAGATACGTTCATGTGTATATGACCTCATGGGCTGTTAAG +
Preference number: 1 (lower is better)
Translates to: SWLFLIRSQSVYCFK*NRYVHVYMTSWAVK
Trigger: CTTAACAGCCCATGAGGTCATATACACATGAACGTATCTATTCCATTTAAAGCAATACACACTCTGGCTTCTGATTAAAAATAGCCAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000569540.5
3UTR TCA 90 bp AGAGTGTGTATTGCTTTAAATGGAATAGATACGTTCATGTGTATATaGCCTCATGGGCTGTTAAGCCTTAATCTCACAATGAAAACTTTC +
Preference number: 1 (lower is better)
Translates to: RVCIALNGIDTFMCI*PHGLLSLNLTMKTF
Trigger: GAAAGTTTTCATTGTGAGATTAAGGCTTAACAGCCCATGAGGTCATATACACATGAACGTATCTATTCCATTTAAAGCAATACACACTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000569540.5
3UTR GCA 90 bp GAAAGATTTGAGCTTCTTGTTAGGGAATTTGTAAGAATATTTGGCTaGATTACAACTCTACTTATAAGTTTCTGCCCGTGTATATGTCAC +
Preference number: 1 (lower is better)
Translates to: ERFELLVREFVRIFG*ITTLLISFCPCICH
Trigger: GTGACATATACACGGGCAGAAACTTATAAGTAGAGTTGTAATGCAGCCAAATATTCTTACAAATTCCCTAACAAGAAGCTCAAATCTTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
3UTR CCA 90 bp GAATGCCTAAAGTATCTTATGTGTGCCTCAATGTCCAAACAAATCTaGCTTAAAATTTCCAACTCAAGCCATTTAATAGGGTATGTATGT +
Preference number: 1 (lower is better)
Translates to: ECLKYLMCASMSKQI*LKISNSSHLIGYVC
Trigger: ACATACATACCCTATTAAATGGCTTGAGTTGGAAATTTTAAGCCAGATTTGTTTGGACATTGAGGCACACATAAGATACTTTAGGCATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
3UTR-3UTR TCA 90 bp TCTGCATATGGTCTGCTAATGGCACCGATGCTTCACATTCCAGGAAATGGTTACAGCCTCTTGGGTAGCTaGGGCCACGCCCAGCTAATT +
Preference number: 2 (lower is better)
Translates to: SAYGLLMAPMLHIPGNGYSLLGS*GHAQLI
Trigger: AATTAGCTGGGCGTGGCCTCAGCTACCCAAGAGGCT...GTAACCATTTCCTGGAATGTGAAGCATCGGTGCCATTAGCAGACCATATGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
3UTR-3UTR TCA 90 bp GACATTTCTGCATATGGTCTGCTAATGGCACCGATGCTTCACATTCCAGGAAATCCTCCCAGGCACAAGTaGTCCTCCCACTTTAGCCTC +
Preference number: 2 (lower is better)
Translates to: DISAYGLLMAPMLHIPGNPPRHK*SSHFSL
Trigger: GAGGCTAAAGTGGGAGGATCACTTGTGCCTGGGAGG...ATTTCCTGGAATGTGAAGCATCGGTGCCATTAGCAGACCATATGCAGAAATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
3UTR-3UTR TCA 90 bp TCTGCATATGGTCTGCTAATGGCACCGATGCTTCACATTCCAGGAAATGGTTACGGCAGGACAATCACTTaGACCCAGGAAACGGAGGCT +
Preference number: 2 (lower is better)
Translates to: SAYGLLMAPMLHIPGNGYGRTIT*TQETEA
Trigger: AGCCTCCGTTTCCTGGGTTCAAGTGATTGTCCTGCC...GTAACCATTTCCTGGAATGTGAAGCATCGGTGCCATTAGCAGACCATATGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
3UTR-3UTR CCA 90 bp GACATTTCTGCATATGGTCTGCTAATGGCACCGATGCTTCACATTCCAGGAAATCAGCACTTTGGGAGGTaGAGGCGGGTCAGGAGATTG +
Preference number: 2 (lower is better)
Translates to: DISAYGLLMAPMLHIPGNQHFGR*RRVRRL
Trigger: CAATCTCCTGACCCGCCTCCACCTCCCAAAGTGCTG...ATTTCCTGGAATGTGAAGCATCGGTGCCATTAGCAGACCATATGCAGAAATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
3UTR-3UTR TCA 90 bp GACATTTCTGCATATGGTCTGCTAATGGCACCGATGCTTCACATTCCAGGAAATCCCCAGAGACACTGTTaGCTTGGCTTGGGTAAAGGT +
Preference number: 2 (lower is better)
Translates to: DISAYGLLMAPMLHIPGNPQRHC*LGLGKG
Trigger: ACCTTTACCCAAGCCAAGTCAACAGTGTCTCTGGGG...ATTTCCTGGAATGTGAAGCATCGGTGCCATTAGCAGACCATATGCAGAAATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
3UTR-3UTR CCA 90 bp GACATTTCTGCATATGGTCTGCTAATGGCACCGATGCTTCACATTCCAGGAAATAATACAAAAATTAGCTaGGCCTTGTGGCGGGTGCCA +
Preference number: 2 (lower is better)
Translates to: DISAYGLLMAPMLHIPGNNTKIS*ALWRVP
Trigger: TGGCACCCGCCACAAGGCCCAGCTAATTTTTGTATT...ATTTCCTGGAATGTGAAGCATCGGTGCCATTAGCAGACCATATGCAGAAATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
3UTR-3UTR TCA 90 bp TCTGCATATGGTCTGCTAATGGCACCGATGCTTCACATTCCAGGAAATGGTTACGAGTGGGTACATATCTaGACATTAAACTTTAGGCAC +
Preference number: 2 (lower is better)
Translates to: SAYGLLMAPMLHIPGNGYEWVHI*TLNFRH
Trigger: GTGCCTAAAGTTTAATGTTCAGATATGTACCCACTC...GTAACCATTTCCTGGAATGTGAAGCATCGGTGCCATTAGCAGACCATATGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
3UTR-3UTR TCA 90 bp TCTGCATATGGTCTGCTAATGGCACCGATGCTTCACATTCCAGGAAATGGTTACCAAATAGTCTTTCCCTaGAAACATTTCAAGCTACAC +
Preference number: 2 (lower is better)
Translates to: SAYGLLMAPMLHIPGNGYQIVFP*KHFKLH
Trigger: GTGTAGCTTGAAATGTTTTCAGGGAAAGACTATTTG...GTAACCATTTCCTGGAATGTGAAGCATCGGTGCCATTAGCAGACCATATGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
3UTR-3UTR TCA 90 bp GACATTTCTGCATATGGTCTGCTAATGGCACCGATGCTTCACATTCCAGGAAATCAAGTTGCTTCCCTTTaGAGAACTAAGAAAACACTA +
Preference number: 2 (lower is better)
Translates to: DISAYGLLMAPMLHIPGNQVASL*RTKKTL
Trigger: TAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTG...ATTTCCTGGAATGTGAAGCATCGGTGCCATTAGCAGACCATATGCAGAAATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
3UTR-3UTR TCA 90 bp GACATTTCTGCATATGGTCTGCTAATGGCACCGATGCTTCACATTCCAGGAAATCATACTCTGCTCATTTaGAATAAACCAGTATCTTCC +
Preference number: 2 (lower is better)
Translates to: DISAYGLLMAPMLHIPGNHTLLI*NKPVSS
Trigger: GGAAGATACTGGTTTATTTCAAATGAGCAGAGTATG...ATTTCCTGGAATGTGAAGCATCGGTGCCATTAGCAGACCATATGCAGAAATGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
3UTR-3UTR GCA 90 bp TCTGCATATGGTCTGCTAATGGCACCGATGCTTCACATTCCAGGAAATGGTTACAGCCAGAGTGTGTATTaGTTTAAATGGAATAGATAC +
Preference number: 2 (lower is better)
Translates to: SAYGLLMAPMLHIPGNGYSQSVY*FKWNRY
Trigger: GTATCTATTCCATTTAAAGCAATACACACTCTGGCT...GTAACCATTTCCTGGAATGTGAAGCATCGGTGCCATTAGCAGACCATATGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357613.8
ENST00000561878.2
3UTR-3UTR TCA 90 bp CAGATAACCACCACCACTACCACCACACTGATTGTATTCCATACAAAACAGTTTCATACTCTGCTCATTTaGAATAAACCAGTATCTTCC +
Preference number: 2 (lower is better)
Translates to: QITTTTTTTLIVFHTKQFHTLLI*NKPVSS
Trigger: GGAAGATACTGGTTTATTTCAAATGAGCAGAGTATG...AAACTGTTTTGTATGGAATACAATCAGTGTGGTGGTAGTGGTGGTGGTTATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
3UTR-3UTR TCA 90 bp TTTAAATGGAATAGATACGTTCATGTGTATATGACCTCATGGGCTGTTAAGCCTCAAGTTGCTTCCCTTTaGAGAACTAAGAAAACACTA +
Preference number: 2 (lower is better)
Translates to: FKWNRYVHVYMTSWAVKPQVASL*RTKKTL
Trigger: TAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTG...AGGCTTAACAGCCCATGAGGTCATATACACATGAACGTATCTATTCCATTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000569540.5
3UTR-3UTR TCA 90 bp GCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCAAGTTGCTTCCCTTTaGAGAACTAAGAAAACACTA +
Preference number: 2 (lower is better)
Translates to: AKRLVLVENNRSPHKSSIQVASL*RTKKTL
Trigger: TAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTG...AATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
3UTR-3UTR TCA 90 bp AGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGACAAGTTGCTTCCCTTTaGAGAACTAAGAAAACACTA +
Preference number: 2 (lower is better)
Translates to: RLVLVENNRSPHKSSILGQVASL*RTKKTL
Trigger: TAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTG...TCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
3UTR-3UTR TCA 90 bp AAAGCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCACAAGTTGCTTCCCTTTaGAGAACTAAGAAAACACTA +
Preference number: 2 (lower is better)
Translates to: KAKRLVLVENNRSPHKSSQVASL*RTKKTL
Trigger: TAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTG...TGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
3UTR-3UTR CAA 90 bp GACATTTCTGCATATGGTCTGCTAATGGCACCGATGCTTCACATTCCAGGAAATCAAGGTCTCACTATGTaGCCCAGGCCAGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: DISAYGLLMAPMLHIPGNQGLTM*PRPVLN
Trigger: GTTCAAGACTGGCCTGGGCAACATAGTGAGACCTTG...ATTTCCTGGAATGTGAAGCATCGGTGCCATTAGCAGACCATATGCAGAAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
3UTR-3UTR CAA 90 bp GGATGCCACCCCAGAGACACTGTTGACTTGGCTTGGGTAAAGGTACACATGAAAAAAGACTTGTTTTGGTaGAGAACAATAGGAGTCCAC +
Preference number: 3 (lower is better)
Translates to: GCHPRDTVDLAWVKVHMKKDLFW*RTIGVH
Trigger: GTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTT...TTTCATGTGTACCTTTACCCAAGCCAAGTCAACAGTGTCTCTGGGGTGGCATCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
3UTR GCA 72 bp AATATGCGACATCTCACAGAATACTGTAAATTTCAGTaGAAAGGATGCCACCCCAGAGACACTGTTGACTTG +
Preference number: 3 (lower is better)
Translates to: NMRHLTEYCKFQ*KGCHPRDTVDL
Trigger: CAAGTCAACAGTGTCTCTGGGGTGGCATCCTTTGCACTGAAATTTACAGTATTCTGTGAGATGTCGCATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
3UTR TCA 72 bp GCTTCACATTCCAGGAAATGGTTACTTAGGGAAGGTTaGTATGTGCTGCAGCATAATAGGAACTTAATTCAA +
Preference number: 3 (lower is better)
Translates to: ASHSRKWLLREG*YVLQHNRNLIQ
Trigger: TTGAATTAAGTTCCTATTATGCTGCAGCACATATCAACCTTCCCTAAGTAACCATTTCCTGGAATGTGAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
3UTR-3UTR CAA 90 bp CTTCAAAATATGCGACATCTCACAGAATACTGTAAATTTCAGTGCAAAGGATGCAAAGACTTGTTTTGGTaGAGAACAATAGGAGTCCAC +
Preference number: 3 (lower is better)
Translates to: LQNMRHLTEYCKFQCKGCKDLFW*RTIGVH
Trigger: GTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTT...GCATCCTTTGCACTGAAATTTACAGTATTCTGTGAGATGTCGCATATTTTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
3UTR GCA 72 bp GAGCTTCTTGTTAGGGAATTTGTAAGAATATTTGGCTaGATTACAACTCTACTTATAAGTTTCTGCCCGTGT +
Preference number: 3 (lower is better)
Translates to: ELLVREFVRIFG*ITTLLISFCPC
Trigger: ACACGGGCAGAAACTTATAAGTAGAGTTGTAATGCAGCCAAATATTCTTACAAATTCCCTAACAAGAAGCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
3UTR CCA 72 bp AAGTATCTTATGTGTGCCTCAATGTCCAAACAAATCTaGCTTAAAATTTCCAACTCAAGCCATTTAATAGGG +
Preference number: 3 (lower is better)
Translates to: KYLMCASMSKQI*LKISNSSHLIG
Trigger: CCCTATTAAATGGCTTGAGTTGGAAATTTTAAGCCAGATTTGTTTGGACATTGAGGCACACATAAGATACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR GCA 90 bp CTTGGTGACATAGGGAGACCCTGTCTGGACTTGCAGTTAAAAGGCACTCTTTCCGACGAGCGCCCGAAGTaGGGTAGCGGCCGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: LGDIGRPCLDLQLKGTLSDERPK*GSGRRR
Trigger: TCGGCGCCGGCCGCTACCGCACTTCGGGCGCTCGTC...GGAAAGAGTGCCTTTTAACTGCAAGTCCAGACAGGGTCTCCCTATGTCACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569276.1
CDS-3UTR TCA 90 bp CACTCCGGCCTTGGTGACATAGGGAGACCCTGTCTGGACTTGCAGTTAAAAGGCGCACTCCGGCCTTGGTaGCATAGGGAGACCCTGTCT +
Preference number: 4 (lower is better)
Translates to: HSGLGDIGRPCLDLQLKGALRPW*HRETLS
Trigger: AGACAGGGTCTCCCTATGTCACCAAGGCCGGAGTGC...GCCTTTTAACTGCAAGTCCAGACAGGGTCTCCCTATGTCACCAAGGCCGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569276.1
CDS-3UTR TCA 90 bp GGATGCCACCCCAGAGACACTGTTGACTTGGCTTGGGTAAAGGTACACATGAAACGGCTCACAGCAGCCTaGACCTCCCAGGCACAAGTG +
Preference number: 4 (lower is better)
Translates to: GCHPRDTVDLAWVKVHMKRLTAA*TSQAQV
Trigger: CACTTGTGCCTGGGAGGTTCAGGCTGCTGTGAGCCG...TTTCATGTGTACCTTTACCCAAGCCAAGTCAACAGTGTCTCTGGGGTGGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp AGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACGACGAGCGCCCGAAGTaGGGTAGCGGCCGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: RCVVLHVPVHPSCFPLKNDERPK*GSGRRR
Trigger: TCGGCGCCGGCCGCTACCGCACTTCGGGCGCTCGTC...GTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp TCTGCATATGGTCTGCTAATGGCACCGATGCTTCACATTCCAGGAAATGGTTACGGCACAGGGTCCCGTTaGCCACCCGCGGCACAACCT +
Preference number: 4 (lower is better)
Translates to: SAYGLLMAPMLHIPGNGYGTGSR*PPAAQP
Trigger: AGGTTGTGCCGCGGGTGGGCAACGGGACCCTGTGCC...GTAACCATTTCCTGGAATGTGAAGCATCGGTGCCATTAGCAGACCATATGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp CAAAATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGGACGAGCGCCCGAAGTaGGGTAGCGGCCGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: QNEEKAEMCCPSCSCSSKDERPK*GSGRRR
Trigger: TCGGCGCCGGCCGCTACCGCACTTCGGGCGCTCGTC...CTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp GACATAGGGAGACCCTGTCTGGACTTGCAGTTAAAAGGCACTCTTTCCTTCATCTTCAGGCTCAGGATCTaGTGCAGGAGCCCGGCCGAC +
Preference number: 4 (lower is better)
Translates to: DIGRPCLDLQLKGTLSFIFRLRI*CRSPAD
Trigger: GTCGGCCGGGCTCCTGCAGCAGATCCTGAGCCTGAA...GATGAAGGAAAGAGTGCCTTTTAACTGCAAGTCCAGACAGGGTCTCCCTATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569276.1
CDS-3UTR GCA 90 bp AGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACGGCACAGGGTCCCGTTaGCCACCCGCGGCACAACCT +
Preference number: 4 (lower is better)
Translates to: RCVVLHVPVHPSCFPLKNGTGSR*PPAAQP
Trigger: AGGTTGTGCCGCGGGTGGGCAACGGGACCCTGTGCC...GTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp CTGTCTGGACTTGCAGTTAAAAGGCACTCTTTCCTTCATCCTACTCAGATATGTGGCACAGGGTCCCGTTaGCCACCCGCGGCACAACCT +
Preference number: 4 (lower is better)
Translates to: LSGLAVKRHSFLHPTQICGTGSR*PPAAQP
Trigger: AGGTTGTGCCGCGGGTGGGCAACGGGACCCTGTGCC...ACATATCTGAGTAGGATGAAGGAAAGAGTGCCTTTTAACTGCAAGTCCAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569276.1
CDS-3UTR CCA 90 bp GGATGCCACCCCAGAGACACTGTTGACTTGGCTTGGGTAAAGGTACACATGAAACAGCACTTTGGGAGGTaGAGGCGGGTCAGGAGATTG +
Preference number: 4 (lower is better)
Translates to: GCHPRDTVDLAWVKVHMKQHFGR*RRVRRL
Trigger: CAATCTCCTGACCCGCCTCCACCTCCCAAAGTGCTG...TTTCATGTGTACCTTTACCCAAGCCAAGTCAACAGTGTCTCTGGGGTGGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp AGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGGAGGCTGCAGTGAGCTaGGACCATGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: RLRCVVLHVPVHPSCFPLEAAVS*DHATAL
Trigger: GAGTGCAGTGGCATGGTCTCAGCTCACTGCAGCCTC...CAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp AAAGCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAGACGAGCGCCCGAAGTaGGGTAGCGGCCGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: KAKRLVLVENNRSPHKSSDERPK*GSGRRR
Trigger: TCGGCGCCGGCCGCTACCGCACTTCGGGCGCTCGTC...TGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp TCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACTACACTCCAAGGCTCAGGATCTGCTaGAGGAGCCCGGCCGACCCG +
Preference number: 4 (lower is better)
Translates to: SCSSKLLPFEELRKHYTPRLRIC*RSPADP
Trigger: CGGGTCGGCCGGGCTCCTGCAGCAGATCCTGAGCCT...TGGAGTGTAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp GGATGCCACCCCAGAGACACTGTTGACTTGGCTTGGGTAAAGGTACACATGAAAAGTGAGCTGAGACCATaGCACTGCACTCCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: GCHPRDTVDLAWVKVHMKSELRP*HCTPAL
Trigger: CAAGGCTGGAGTGCAGTGGCATGGTCTCAGCTCACT...TTTCATGTGTACCTTTACCCAAGCCAAGTCAACAGTGTCTCTGGGGTGGCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp AGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGCCCACTTTAGCCTCTTaGGTAGCTGAGGCCACGCCC +
Preference number: 4 (lower is better)
Translates to: RLRCVVLHVPVHPSCFPLPTLAS*VAEATP
Trigger: GGGCGTGGCCTCAGCTACCCAAGAGGCTAAAGTGGG...CAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp GGATGCCACCCCAGAGACACTGTTGACTTGGCTTGGGTAAAGGTACACATGAAAGTCCAGTGCCCAGTGTaGGGGCTTCAAATGGTATCA +
Preference number: 4 (lower is better)
Translates to: GCHPRDTVDLAWVKVHMKVQCPV*GLQMVS
Trigger: TGATACCATTTGAAGCCCTCACACTGGGCACTGGAC...TTTCATGTGTACCTTTACCCAAGCCAAGTCAACAGTGTCTCTGGGGTGGCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp CACTCCGGCCTTGGTGACATAGGGAGACCCTGTCTGGACTTGCAGTTAAAAGGCAACCTACCATATTTGTaGTGTCTGAGGGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: HSGLGDIGRPCLDLQLKGNLPYL*CLRVKR
Trigger: CCTCTTCACCCTCAGACATCACAAATATGGTAGGTT...GCCTTTTAACTGCAAGTCCAGACAGGGTCTCCCTATGTCACCAAGGCCGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569276.1
CDS-3UTR GCA 90 bp AGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTTCAGGCTCAGGATCTaGTGCAGGAGCCCGGCCGAC +
Preference number: 4 (lower is better)
Translates to: RCVVLHVPVHPSCFPLKNFRLRI*CRSPAD
Trigger: GTCGGCCGGGCTCCTGCAGCAGATCCTGAGCCTGAA...GTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp AGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGCCAGGAAACGGAGGCTaGAGTGAGCTGAGACCATGC +
Preference number: 4 (lower is better)
Translates to: RLRCVVLHVPVHPSCFPLPGNGG*SELRPC
Trigger: GCATGGTCTCAGCTCACTGCAGCCTCCGTTTCCTGG...CAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp GACATAGGGAGACCCTGTCTGGACTTGCAGTTAAAAGGCACTCTTTCCTTCATCGCAGTGAGCCAATATTaGAACCACTGCACTCCGGCC +
Preference number: 4 (lower is better)
Translates to: DIGRPCLDLQLKGTLSFIAVSQY*NHCTPA
Trigger: GGCCGGAGTGCAGTGGTTGCAATATTGGCTCACTGC...GATGAAGGAAAGAGTGCCTTTTAACTGCAAGTCCAGACAGGGTCTCCCTATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569276.1
CDS-3UTR CCA 90 bp AAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTATAGTCCCATCACGTTaGGAGGCCGAGGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: KRLRCVVLHVPVHPSCFPIVPSR*EAEAGG
Trigger: TCCACCCGCCTCGGCCTCCCAACGTGATGGGACTAT...AGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp AGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGTTCACCACAGAGAAATaGGGGACGAGCGCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: RLRCVVLHVPVHPSCFPLFTTEK*GTSARS
Trigger: ACTTCGGGCGCTCGTCCCTCATTTCTCTGTGGTGAA...CAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp TCTGCATATGGTCTGCTAATGGCACCGATGCTTCACATTCCAGGAAATGGTTACTGCCCAGGCCAGTCTTaGACTCTTGGGCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: SAYGLLMAPMLHIPGNGYCPGQS*TLGLKQ
Trigger: TTGCTTGAGCCCAAGAGTTCAAGACTGGCCTGGGCA...GTAACCATTTCCTGGAATGTGAAGCATCGGTGCCATTAGCAGACCATATGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp AAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTAGCCTCTTGGGTAGCTaGGGCCACGCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: KRLRCVVLHVPVHPSCFPSLLGS*GHAQLI
Trigger: AATTAGCTGGGCGTGGCCTCAGCTACCCAAGAGGCT...AGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp CAGATAACCACCACCACTACCACCACACTGATTGTATTCCATACAAAACAGTTTCGGCTCACAGCAGCCTaGACCTCCCAGGCACAAGTG +
Preference number: 4 (lower is better)
Translates to: QITTTTTTTLIVFHTKQFRLTAA*TSQAQV
Trigger: CACTTGTGCCTGGGAGGTTCAGGCTGCTGTGAGCCG...AAACTGTTTTGTATGGAATACAATCAGTGTGGTGGTAGTGGTGGTGGTTATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp CCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACTTCAGGCTCAGGATCTaGTGCAGGAGCCCGGCCGAC +
Preference number: 4 (lower is better)
Translates to: PSCSCSSKLLPFEELRKHFRLRI*CRSPAD
Trigger: GTCGGCCGGGCTCCTGCAGCAGATCCTGAGCCTGAA...GTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp AAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTCCGGGTGGCAGAGGTTaGAGTGAGCTGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: KRLRCVVLHVPVHPSCFPPGGRG*SELRLH
Trigger: GTGCAATCTCAGCTCACTCCAACCTCTGCCACCCGG...AGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CCA 90 bp AGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACCCCACTTTAGCCTCTTaGGTAGCTGAGGCCACGCCC +
Preference number: 4 (lower is better)
Translates to: RCVVLHVPVHPSCFPLKNPTLAS*VAEATP
Trigger: GGGCGTGGCCTCAGCTACCCAAGAGGCTAAAGTGGG...GTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp AGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACATAGTCCCATCACGTTaGGAGGCCGAGGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RCVVLHVPVHPSCFPLKNIVPSR*EAEAGG
Trigger: TCCACCCGCCTCGGCCTCCCAACGTGATGGGACTAT...GTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp TCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACTACACTCCAGAGGCTGCAGTGAGCTaGGACCATGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: SCSSKLLPFEELRKHYTPEAAVS*DHATAL
Trigger: GAGTGCAGTGGCATGGTCTCAGCTCACTGCAGCCTC...TGGAGTGTAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp AAAGCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAGGACCGCCGAAGAAGTaGTGGGGAAAGGGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: KAKRLVLVENNRSPHKSSGPPKK*WGKGLR
Trigger: CCGGAGCCCCTTTCCCCATCACTTCTTCGGCGGTCC...TGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000569540.5
CDS-3UTR GCA 90 bp AGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACCCAGGAAACGGAGGCTaGAGTGAGCTGAGACCATGC +
Preference number: 4 (lower is better)
Translates to: RCVVLHVPVHPSCFPLKNPGNGG*SELRPC
Trigger: GCATGGTCTCAGCTCACTGCAGCCTCCGTTTCCTGG...GTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp TCTGCATATGGTCTGCTAATGGCACCGATGCTTCACATTCCAGGAAATGGTTACAAGATGTCAGATTTATaGCCAGGCGCGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: SAYGLLMAPMLHIPGNGYKMSDL*PGAVAH
Trigger: GTGAGCCACCGCGCCTGGCCATAAATCTGACATCTT...GTAACCATTTCCTGGAATGTGAAGCATCGGTGCCATTAGCAGACCATATGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357613.8
ENST00000561878.2
CDS-3UTR CCA 90 bp AGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGATGTCAGATTTATaGCCAGGCGCGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: RLRCVVLHVPVHPSCFPLKMSDL*PGAVAH
Trigger: GTGAGCCACCGCGCCTGGCCATAAATCTGACATCTT...CAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000569540.5
CDS-3UTR CCA 90 bp AATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCCCACTTTAGCCTCTTaGGTAGCTGAGGCCACGCCC +
Preference number: 4 (lower is better)
Translates to: NEEKAEMCCPSCSCSSKLPTLAS*VAEATP
Trigger: GGGCGTGGCCTCAGCTACCCAAGAGGCTAAAGTGGG...CAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp GGATGCCACCCCAGAGACACTGTTGACTTGGCTTGGGTAAAGGTACACATGAAAAGAAATCAGCTTTTATaGTCAGGAGGCTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: GCHPRDTVDLAWVKVHMKRNQLL*SGGCLP
Trigger: AGGGAGGCAGCCTCCTGACCATAAAAGCTGATTTCT...TTTCATGTGTACCTTTACCCAAGCCAAGTCAACAGTGTCTCTGGGGTGGCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp GGATGCCACCCCAGAGACACTGTTGACTTGGCTTGGGTAAAGGTACACATGAAAGATTCCAGCAGTAATTaGTCCCACGATGCCCATCAA +
Preference number: 4 (lower is better)
Translates to: GCHPRDTVDLAWVKVHMKDSSSN*SHDAHQ
Trigger: TTGATGGGCATCGTGGGACCAATTACTGCTGGAATC...TTTCATGTGTACCTTTACCCAAGCCAAGTCAACAGTGTCTCTGGGGTGGCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561878.2
ENST00000567796.1
ENST00000569540.5
CDS-3UTR TCA 90 bp CTGTCTGGACTTGCAGTTAAAAGGCACTCTTTCCTTCATCCTACTCAGATATGTTTCACCACAGAGAAATaGGGGACGAGCGCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: LSGLAVKRHSFLHPTQICFTTEK*GTSARS
Trigger: ACTTCGGGCGCTCGTCCCTCATTTCTCTGTGGTGAA...ACATATCTGAGTAGGATGAAGGAAAGAGTGCCTTTTAACTGCAAGTCCAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569276.1
CDS-3UTR TCA 90 bp AGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTGGCAGAGGTTGGAGTaGGCTGAGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: RCVVLHVPVHPSCFPLKNWQRLE*AEIAPL
Trigger: CAGTGGTGCAATCTCAGCTCACTCCAACCTCTGCCA...GTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp GGATGCCACCCCAGAGACACTGTTGACTTGGCTTGGGTAAAGGTACACATGAAAACGTTCATGTGTATATaGCCTCATGGGCTGTTAAGC +
Preference number: 4 (lower is better)
Translates to: GCHPRDTVDLAWVKVHMKTFMCI*PHGLLS
Trigger: GCTTAACAGCCCATGAGGTCATATACACATGAACGT...TTTCATGTGTACCTTTACCCAAGCCAAGTCAACAGTGTCTCTGGGGTGGCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000569540.5
CDS-3UTR TCA 90 bp AATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGAGCCTCTTGGGTAGCTaGGGCCACGCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: NEEKAEMCCPSCSCSSKLSLLGS*GHAQLI
Trigger: AATTAGCTGGGCGTGGCCTCAGCTACCCAAGAGGCT...CAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp TCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACTACACTCCACCTCCCAGGCACAAGTaGTCCTCCCACTTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: SCSSKLLPFEELRKHYTPPPRHK*SSHFSL
Trigger: GAGGCTAAAGTGGGAGGATCACTTGTGCCTGGGAGG...TGGAGTGTAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp CTTCAAAATATGCGACATCTCACAGAATACTGTAAATTTCAGTGCAAAGGATGCCGGCTCACAGCAGCCTaGACCTCCCAGGCACAAGTG +
Preference number: 4 (lower is better)
Translates to: LQNMRHLTEYCKFQCKGCRLTAA*TSQAQV
Trigger: CACTTGTGCCTGGGAGGTTCAGGCTGCTGTGAGCCG...GCATCCTTTGCACTGAAATTTACAGTATTCTGTGAGATGTCGCATATTTTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp GGATGCCACCCCAGAGACACTGTTGACTTGGCTTGGGTAAAGGTACACATGAAAAACCTACCATATTTGTaGTGTCTGAGGGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GCHPRDTVDLAWVKVHMKNLPYL*CLRVKR
Trigger: CCTCTTCACCCTCAGACATCACAAATATGGTAGGTT...TTTCATGTGTACCTTTACCCAAGCCAAGTCAACAGTGTCTCTGGGGTGGCATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000561878.2
ENST00000567796.1
ENST00000569540.5
CDS-3UTR GCA 90 bp AAAGCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCATTCAGGCTCAGGATCTaGTGCAGGAGCCCGGCCGAC +
Preference number: 4 (lower is better)
Translates to: KAKRLVLVENNRSPHKSSFRLRI*CRSPAD
Trigger: GTCGGCCGGGCTCCTGCAGCAGATCCTGAGCCTGAA...TGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp AGACCCTGTCTGGACTTGCAGTTAAAAGGCACTCTTTCCTTCATCCTACTCAGACCAAGAGGTGGAGGCTaGAGTGAGCCAATATTGCAA +
Preference number: 4 (lower is better)
Translates to: RPCLDLQLKGTLSFILLRPRGGG*SEPILQ
Trigger: TTGCAATATTGGCTCACTGCAGCCTCCACCTCTTGG...TCTGAGTAGGATGAAGGAAAGAGTGCCTTTTAACTGCAAGTCCAGACAGGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569276.1
CDS-3UTR CCA 90 bp TCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACTACACTCCACCGGGTGGCAGAGGTTaGAGTGAGCTGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: SCSSKLLPFEELRKHYTPPGGRG*SELRLH
Trigger: GTGCAATCTCAGCTCACTCCAACCTCTGCCACCCGG...TGGAGTGTAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CCA 90 bp CCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACCCGGGTGGCAGAGGTTaGAGTGAGCTGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: PSCSCSSKLLPFEELRKHPGGRG*SELRLH
Trigger: GTGCAATCTCAGCTCACTCCAACCTCTGCCACCCGG...GTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CCA 90 bp AAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTAAGATGTCAGATTTATaGCCAGGCGCGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: KRLRCVVLHVPVHPSCFPKMSDL*PGAVAH
Trigger: GTGAGCCACCGCGCCTGGCCATAAATCTGACATCTT...AGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000569540.5
CDS-3UTR TCA 90 bp TCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACTACACTCCATTCACCACAGAGAAATaGGGGACGAGCGCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: SCSSKLLPFEELRKHYTPFTTEK*GTSARS
Trigger: ACTTCGGGCGCTCGTCCCTCATTTCTCTGTGGTGAA...TGGAGTGTAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp AAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTGCTGCACCATATTTGTaGTGTCTGAGGGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KRLRCVVLHVPVHPSCFPAAPYL*CLRVKR
Trigger: CCTCTTCACCCTCAGACATCACAAATATGGTGCAGC...AGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000566980.1
ENST00000568559.1
CDS-3UTR TCA 90 bp AGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACCCCCAGAGACACTGTTaGCTTGGCTTGGGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: RCVVLHVPVHPSCFPLKNPQRHC*LGLGKG
Trigger: ACCTTTACCCAAGCCAAGTCAACAGTGTCTCTGGGG...GTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp CAAAATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTGGCAGAGGTTGGAGTaGGCTGAGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: QNEEKAEMCCPSCSCSSKWQRLE*AEIAPL
Trigger: CAGTGGTGCAATCTCAGCTCACTCCAACCTCTGCCA...CTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp CAGATAACCACCACCACTACCACCACACTGATTGTATTCCATACAAAACAGTTTTGGCAGAGGTTGGAGTaGGCTGAGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: QITTTTTTTLIVFHTKQFWQRLE*AEIAPL
Trigger: CAGTGGTGCAATCTCAGCTCACTCCAACCTCTGCCA...AAACTGTTTTGTATGGAATACAATCAGTGTGGTGGTAGTGGTGGTGGTTATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp AATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGTGGCAGAGGTTGGAGTaGGCTGAGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: NEEKAEMCCPSCSCSSKLWQRLE*AEIAPL
Trigger: CAGTGGTGCAATCTCAGCTCACTCCAACCTCTGCCA...CAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp TCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACTACACTCCATGCCCAGGCCAGTCTTaGACTCTTGGGCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: SCSSKLLPFEELRKHYTPCPGQS*TLGLKQ
Trigger: TTGCTTGAGCCCAAGAGTTCAAGACTGGCCTGGGCA...TGGAGTGTAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp CTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGCTAGCCTCTTGGGTAGCTaGGGCCACGCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: LVLVENNRSPHKSSILGASLLGS*GHAQLI
Trigger: AATTAGCTGGGCGTGGCCTCAGCTACCCAAGAGGCT...AGCTCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp GCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTGAGGCTGCAGTGAGCTaGGACCATGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: AKRLVLVENNRSPHKSSIEAAVS*DHATAL
Trigger: GAGTGCAGTGGCATGGTCTCAGCTCACTGCAGCCTC...AATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp CCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACGGCAGGACAATCACTTaGACCCAGGAAACGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PSCSCSSKLLPFEELRKHGRTIT*TQETEA
Trigger: AGCCTCCGTTTCCTGGGTTCAAGTGATTGTCCTGCC...GTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp TCTGCATATGGTCTGCTAATGGCACCGATGCTTCACATTCCAGGAAATGGTTACTTGAAGTCAGGAGTTTaGGACCAGCCTGTCCAACAT +
Preference number: 4 (lower is better)
Translates to: SAYGLLMAPMLHIPGNGYLKSGV*DQPVQH
Trigger: ATGTTGGACAGGCTGGTCTCAAACTCCTGACTTCAA...GTAACCATTTCCTGGAATGTGAAGCATCGGTGCCATTAGCAGACCATATGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp AGACCCTGTCTGGACTTGCAGTTAAAAGGCACTCTTTCCTTCATCCTACTCAGAGAGAGAAGACACCAGTaGCCACAGGAATACACCATA +
Preference number: 4 (lower is better)
Translates to: RPCLDLQLKGTLSFILLRERRHQ*PQEYTI
Trigger: TATGGTGTATTCCTGTGGGCACTGGTGTCTTCTCTC...TCTGAGTAGGATGAAGGAAAGAGTGCCTTTTAACTGCAAGTCCAGACAGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569276.1
CDS-3UTR TCA 90 bp CTTATGTGTGCCTCAATGTCCAAACAAATCTGGCTTAAAATTTCCAACTCAAGCTTCACCACAGAGAAATaGGGGACGAGCGCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: LMCASMSKQIWLKISNSSFTTEK*GTSARS
Trigger: ACTTCGGGCGCTCGTCCCTCATTTCTCTGTGGTGAA...GCTTGAGTTGGAAATTTTAAGCCAGATTTGTTTGGACATTGAGGCACACATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp TCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACTACACTCCAGTCCAGTGCCCAGTGTaGGGGCTTCAAATGGTATCA +
Preference number: 4 (lower is better)
Translates to: SCSSKLLPFEELRKHYTPVQCPV*GLQMVS
Trigger: TGATACCATTTGAAGCCCTCACACTGGGCACTGGAC...TGGAGTGTAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp TCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACTACACTCCACCCCAGAGACACTGTTaGCTTGGCTTGGGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: SCSSKLLPFEELRKHYTPPQRHC*LGLGKG
Trigger: ACCTTTACCCAAGCCAAGTCAACAGTGTCTCTGGGG...TGGAGTGTAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp CTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGCTTGCCCAGGCCAGTCTTaGACTCTTGGGCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: LVLVENNRSPHKSSILGACPGQS*TLGLKQ
Trigger: TTGCTTGAGCCCAAGAGTTCAAGACTGGCCTGGGCA...AGCTCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp TTTAAATGGAATAGATACGTTCATGTGTATATGACCTCATGGGCTGTTAAGCCTCCTCCCAGGCACAAGTaGTCCTCCCACTTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: FKWNRYVHVYMTSWAVKPPPRHK*SSHFSL
Trigger: GAGGCTAAAGTGGGAGGATCACTTGTGCCTGGGAGG...AGGCTTAACAGCCCATGAGGTCATATACACATGAACGTATCTATTCCATTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357613.8
ENST00000561878.2
CDS-3UTR TCA 90 bp CTTATGTGTGCCTCAATGTCCAAACAAATCTGGCTTAAAATTTCCAACTCAAGCGGCAGGACAATCACTTaGACCCAGGAAACGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LMCASMSKQIWLKISNSSGRTIT*TQETEA
Trigger: AGCCTCCGTTTCCTGGGTTCAAGTGATTGTCCTGCC...GCTTGAGTTGGAAATTTTAAGCCAGATTTGTTTGGACATTGAGGCACACATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp AAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTGAGAGAAGACACCAGTaGCCACAGGAATACACCATA +
Preference number: 4 (lower is better)
Translates to: KRLRCVVLHVPVHPSCFPERRHQ*PQEYTI
Trigger: TATGGTGTATTCCTGTGGGCACTGGTGTCTTCTCTC...AGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR GCA 90 bp GCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAGAGAAGACACCAGTaGCCACAGGAATACACCATA +
Preference number: 4 (lower is better)
Translates to: AEMCCPSCSCSSKLLPFEERRHQ*PQEYTI
Trigger: TATGGTGTATTCCTGTGGGCACTGGTGTCTTCTCTC...TTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR GCA 90 bp GCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAATATCATTTCCTTCCCTaGTGCTCGGTAAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: AEMCCPSCSCSSKLLPFEYHFLP*CSVNSS
Trigger: GCTGGAGTTTACCGAGCAGCAGGGAAGGAAATGATA...TTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR GCA 90 bp TTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGCTTCAAAACCAGGAAACGGAGGCTaGAGTGAGCTGAGACCATGC +
Preference number: 4 (lower is better)
Translates to: LVENNRSPHKSSILGASKPGNGG*SELRPC
Trigger: GCATGGTCTCAGCTCACTGCAGCCTCCGTTTCCTGG...TTTTGAAGCTCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp GGATGCCACCCCAGAGACACTGTTGACTTGGCTTGGGTAAAGGTACACATGAAAACTTTAGGCACTTTCTaGGAGTTGATACCCAATACT +
Preference number: 4 (lower is better)
Translates to: GCHPRDTVDLAWVKVHMKTLGTF*ELIPNT
Trigger: AGTATTGGGTATCAACTCCCAGAAAGTGCCTAAAGT...TTTCATGTGTACCTTTACCCAAGCCAAGTCAACAGTGTCTCTGGGGTGGCATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CCA 90 bp TTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGCTTCAAAACCGGGTGGCAGAGGTTaGAGTGAGCTGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: LVENNRSPHKSSILGASKPGGRG*SELRLH
Trigger: GTGCAATCTCAGCTCACTCCAACCTCTGCCACCCGG...TTTTGAAGCTCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CCA 90 bp CTTCAAAATATGCGACATCTCACAGAATACTGTAAATTTCAGTGCAAAGGATGCCAGCACTTTGGGAGGTaGAGGCGGGTCAGGAGATTG +
Preference number: 4 (lower is better)
Translates to: LQNMRHLTEYCKFQCKGCQHFGR*RRVRRL
Trigger: CAATCTCCTGACCCGCCTCCACCTCCCAAAGTGCTG...GCATCCTTTGCACTGAAATTTACAGTATTCTGTGAGATGTCGCATATTTTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp GCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCAGCACTTTGGGAGGTaGAGGCGGGTCAGGAGATTG +
Preference number: 4 (lower is better)
Translates to: AKRLVLVENNRSPHKSSIQHFGR*RRVRRL
Trigger: CAATCTCCTGACCCGCCTCCACCTCCCAAAGTGCTG...AATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp AAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTGATTCCAGCAGTAATTaGTCCCACGATGCCCATCAA +
Preference number: 4 (lower is better)
Translates to: KRLRCVVLHVPVHPSCFPDSSSN*SHDAHQ
Trigger: TTGATGGGCATCGTGGGACCAATTACTGCTGGAATC...AGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561878.2
ENST00000567796.1
ENST00000569540.5
CDS-3UTR CCA 90 bp CAAAATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGACAATCCGCCCAACTTaGCCTCCTCCCTTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: QNEEKAEMCCPSCSCSSKTIRPT*PPPFRK
Trigger: CTTTCTGAAGGGAGGAGGCCAAGTTGGGCGGATTGT...CTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567796.1
CDS-3UTR TCA 90 bp CTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGCTCCCCAGAGACACTGTTaGCTTGGCTTGGGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: LVLVENNRSPHKSSILGAPQRHC*LGLGKG
Trigger: ACCTTTACCCAAGCCAAGTCAACAGTGTCTCTGGGG...AGCTCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp AAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTACGTTCATGTGTATATaGCCTCATGGGCTGTTAAGC +
Preference number: 4 (lower is better)
Translates to: KRLRCVVLHVPVHPSCFPTFMCI*PHGLLS
Trigger: GCTTAACAGCCCATGAGGTCATATACACATGAACGT...AGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000569540.5
CDS-3UTR TCA 90 bp CTTCAAAATATGCGACATCTCACAGAATACTGTAAATTTCAGTGCAAAGGATGCGGCAGGACAATCACTTaGACCCAGGAAACGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LQNMRHLTEYCKFQCKGCGRTIT*TQETEA
Trigger: AGCCTCCGTTTCCTGGGTTCAAGTGATTGTCCTGCC...GCATCCTTTGCACTGAAATTTACAGTATTCTGTGAGATGTCGCATATTTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp GCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAAACCTACCATATTTGTaGTGTCTGAGGGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: AEMCCPSCSCSSKLLPFENLPYL*CLRVKR
Trigger: CCTCTTCACCCTCAGACATCACAAATATGGTAGGTT...TTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561878.2
ENST00000567796.1
ENST00000569540.5
CDS-3UTR TCA 90 bp AGGGAGACCCTGTCTGGACTTGCAGTTAAAAGGCACTCTTTCCTTCATCCTACTGGATGCTTACAGACATaGACCTACCATATTTGTGAT +
Preference number: 4 (lower is better)
Translates to: RETLSGLAVKRHSFLHPTGCLQT*TYHICD
Trigger: ATCACAAATATGGTAGGTTCATGTCTGTAAGCATCC...AGTAGGATGAAGGAAAGAGTGCCTTTTAACTGCAAGTCCAGACAGGGTCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569276.1
CDS-3UTR GCA 90 bp AGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTATCATTTCCTTCCCTaGTGCTCGGTAAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: RCVVLHVPVHPSCFPLKNYHFLP*CSVNSS
Trigger: GCTGGAGTTTACCGAGCAGCAGGGAAGGAAATGATA...GTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR GCA 90 bp AGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGTACTGTAAATTTCAGTaGAAAGGATGCCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: RLRCVVLHVPVHPSCFPLYCKFQ*KGCHPR
Trigger: TCTGGGGTGGCATCCTTTGCACTGAAATTTACAGTA...CAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR GCA 90 bp AGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAAGTGAGCTGAGACCATaGCACTGCACTCCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: RLVLVENNRSPHKSSILGSELRP*HCTPAL
Trigger: CAAGGCTGGAGTGCAGTGGCATGGTCTCAGCTCACT...TCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp AGAAAGCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTAGTGAGCTGAGACCATaGCACTGCACTCCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: RKPKDLFWLRTIGVHISLSELRP*HCTPAL
Trigger: CAAGGCTGGAGTGCAGTGGCATGGTCTCAGCTCACT...AAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp TTTAAATGGAATAGATACGTTCATGTGTATATGACCTCATGGGCTGTTAAGCCTACCATACCACATCTCTaGGGCCGCTCTCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: FKWNRYVHVYMTSWAVKPTIPHL*GRSLHL
Trigger: GAGATGCAGAGAGCGGCCGCAGAGATGTGGTATGGT...AGGCTTAACAGCCCATGAGGTCATATACACATGAACGTATCTATTCCATTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569540.5
CDS-3UTR CCA 90 bp AAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTGTGAGGGCTTCAAATaGTATCATTTCCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: KRLRCVVLHVPVHPSCFPCEGFK*YHFLPC
Trigger: GCAGGGAAGGAAATGATACCATTTGAAGCCCTCACA...AGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CCA 90 bp TCTGCATATGGTCTGCTAATGGCACCGATGCTTCACATTCCAGGAAATGGTTACCAGAGACTCTCCTCCTaGCTATTTTTAATCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SAYGLLMAPMLHIPGNGYQRLSS*LFLIRS
Trigger: GCTTCTGATTAAAAATAGCCAGGAGGAGAGTCTCTG...GTAACCATTTCCTGGAATGTGAAGCATCGGTGCCATTAGCAGACCATATGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357613.8
ENST00000561878.2
CDS-3UTR CCA 90 bp AGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGCAGAGACTCTCCTCCTaGCTATTTTTAATCAGAAGC +
Preference number: 4 (lower is better)
Translates to: RLRCVVLHVPVHPSCFPLQRLSS*LFLIRS
Trigger: GCTTCTGATTAAAAATAGCCAGGAGGAGAGTCTCTG...CAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000569540.5
CDS-3UTR CCA 90 bp GCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAATTCTATGAGTTTCCCTaGCAAATTGGTCCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: AEMCCPSCSCSSKLLPFEFYEFP*QIGPPD
Trigger: GTCAGGAGGACCAATTTGCCAGGGAAACTCATAGAA...TTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357613.8
ENST00000561878.2
CDS-3UTR CCA 90 bp CTGTCTGGACTTGCAGTTAAAAGGCACTCTTTCCTTCATCCTACTCAGATATGTGATTCCAGCAGTAATTaGTCCCACGATGCCCATCAA +
Preference number: 4 (lower is better)
Translates to: LSGLAVKRHSFLHPTQICDSSSN*SHDAHQ
Trigger: TTGATGGGCATCGTGGGACCAATTACTGCTGGAATC...ACATATCTGAGTAGGATGAAGGAAAGAGTGCCTTTTAACTGCAAGTCCAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569276.1
CDS-3UTR TCA 90 bp AAAGCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAGTCCAGTGCCCAGTGTaGGGGCTTCAAATGGTATCA +
Preference number: 4 (lower is better)
Translates to: KAKRLVLVENNRSPHKSSVQCPV*GLQMVS
Trigger: TGATACCATTTGAAGCCCTCACACTGGGCACTGGAC...TGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp GCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTGTCCAGTGCCCAGTGTaGGGGCTTCAAATGGTATCA +
Preference number: 4 (lower is better)
Translates to: AKRLVLVENNRSPHKSSIVQCPV*GLQMVS
Trigger: TGATACCATTTGAAGCCCTCACACTGGGCACTGGAC...AATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp TTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGCTTCAAAACCCCAGAGACACTGTTaGCTTGGCTTGGGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: LVENNRSPHKSSILGASKPQRHC*LGLGKG
Trigger: ACCTTTACCCAAGCCAAGTCAACAGTGTCTCTGGGG...TTTTGAAGCTCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp CTTCAAAATATGCGACATCTCACAGAATACTGTAAATTTCAGTGCAAAGGATGCCCCCAGAGACACTGTTaGCTTGGCTTGGGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: LQNMRHLTEYCKFQCKGCPQRHC*LGLGKG
Trigger: ACCTTTACCCAAGCCAAGTCAACAGTGTCTCTGGGG...GCATCCTTTGCACTGAAATTTACAGTATTCTGTGAGATGTCGCATATTTTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp AAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTCCACTACCACCACACTaGTTGTATTCCATACAAAAC +
Preference number: 4 (lower is better)
Translates to: KRLRCVVLHVPVHPSCFPPLPPH*LYSIQN
Trigger: GTTTTGTATGGAATACAATCAGTGTGGTGGTAGTGG...AGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp AGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGTTACTTAGGGAAGGTTaGTATGTGCTGCAGCATAAT +
Preference number: 4 (lower is better)
Translates to: RLRCVVLHVPVHPSCFPLLLREG*YVLQHN
Trigger: ATTATGCTGCAGCACATATCAACCTTCCCTAAGTAA...CAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp TCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACTACACTCCAGAGAGAAGACACCAGTaGCCACAGGAATACACCATA +
Preference number: 4 (lower is better)
Translates to: SCSSKLLPFEELRKHYTPERRHQ*PQEYTI
Trigger: TATGGTGTATTCCTGTGGGCACTGGTGTCTTCTCTC...TGGAGTGTAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR GCA 90 bp GCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAATACTGTAAATTTCAGTaGAAAGGATGCCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: AEMCCPSCSCSSKLLPFEYCKFQ*KGCHPR
Trigger: TCTGGGGTGGCATCCTTTGCACTGAAATTTACAGTA...TTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR GCA 90 bp GGATGCCACCCCAGAGACACTGTTGACTTGGCTTGGGTAAAGGTACACATGAAAAGCCAGAGTGTGTATTaGTTTAAATGGAATAGATAC +
Preference number: 4 (lower is better)
Translates to: GCHPRDTVDLAWVKVHMKSQSVY*FKWNRY
Trigger: GTATCTATTCCATTTAAAGCAATACACACTCTGGCT...TTTCATGTGTACCTTTACCCAAGCCAAGTCAACAGTGTCTCTGGGGTGGCATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000569540.5
CDS-3UTR GCA 90 bp CAAAATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGATCGACCTCCCAAAGTaGTGGGATTATAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: QNEEKAEMCCPSCSCSSKIDLPK*WDYRCE
Trigger: CTCACACCTATAATCCCAGCACTTTGGGAGGTCGAT...CTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357613.8
ENST00000561878.2
CDS-3UTR GCA 90 bp AAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTAGTACACGACATTTCTaGATATGGTCTGCTAATGGC +
Preference number: 4 (lower is better)
Translates to: KRLRCVVLHVPVHPSCFPSTRHF*IWSANG
Trigger: GCCATTAGCAGACCATATGCAGAAATGTCGTGTACT...AGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp GCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAAAACCAAAGCACAGCTaGGGGAGGATATTTCTAAGA +
Preference number: 4 (lower is better)
Translates to: AEMCCPSCSCSSKLLPFEKPKHS*GRIFLR
Trigger: TCTTAGAAATATCCTCCCCCAGCTGTGCTTTGGTTT...TTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp GACATTTCTGCATATGGTCTGCTAATGGCACCGATGCTTCACATTCCAGGAAATAAACCAAAGCACAGCTaGGGGAGGATATTTCTAAGA +
Preference number: 4 (lower is better)
Translates to: DISAYGLLMAPMLHIPGNKPKHS*GRIFLR
Trigger: TCTTAGAAATATCCTCCCCCAGCTGTGCTTTGGTTT...ATTTCCTGGAATGTGAAGCATCGGTGCCATTAGCAGACCATATGCAGAAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp TCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACTACACTCCAAGAAATCAGCTTTTATaGTCAGGAGGCTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SCSSKLLPFEELRKHYTPRNQLL*SGGCLP
Trigger: AGGGAGGCAGCCTCCTGACCATAAAAGCTGATTTCT...TGGAGTGTAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp CAAAATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGAATACAAAAATTAGCTaGGCCTTGTGGCGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: QNEEKAEMCCPSCSCSSKNTKIS*ALWRVP
Trigger: TGGCACCCGCCACAAGGCCCAGCTAATTTTTGTATT...CTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp GCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAGTGGGTACATATCTaGACATTAAACTTTAGGCAC +
Preference number: 4 (lower is better)
Translates to: AEMCCPSCSCSSKLLPFEEWVHI*TLNFRH
Trigger: GTGCCTAAAGTTTAATGTTCAGATATGTACCCACTC...TTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp AGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACCCACTACCACCACACTaGTTGTATTCCATACAAAAC +
Preference number: 4 (lower is better)
Translates to: RCVVLHVPVHPSCFPLKNPLPPH*LYSIQN
Trigger: GTTTTGTATGGAATACAATCAGTGTGGTGGTAGTGG...GTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp AATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGACGTTCATGTGTATATaGCCTCATGGGCTGTTAAGC +
Preference number: 4 (lower is better)
Translates to: NEEKAEMCCPSCSCSSKLTFMCI*PHGLLS
Trigger: GCTTAACAGCCCATGAGGTCATATACACATGAACGT...CAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000569540.5
CDS-3UTR TCA 90 bp GCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAATTACTTAGGGAAGGTTaGTATGTGCTGCAGCATAAT +
Preference number: 4 (lower is better)
Translates to: AEMCCPSCSCSSKLLPFELLREG*YVLQHN
Trigger: ATTATGCTGCAGCACATATCAACCTTCCCTAAGTAA...TTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp AAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTGGATGCTTACAGACATaGACCTACCATATTTGTGAT +
Preference number: 4 (lower is better)
Translates to: KRLRCVVLHVPVHPSCFPGCLQT*TYHICD
Trigger: ATCACAAATATGGTAGGTTCATGTCTGTAAGCATCC...AGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561878.2
ENST00000567796.1
ENST00000569540.5
CDS-3UTR GCA 90 bp AGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTACTGTAAATTTCAGTaGAAAGGATGCCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: RCVVLHVPVHPSCFPLKNYCKFQ*KGCHPR
Trigger: TCTGGGGTGGCATCCTTTGCACTGAAATTTACAGTA...GTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR GCA 90 bp CTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGCTATCGACCTCCCAAAGTaGTGGGATTATAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: LVLVENNRSPHKSSILGAIDLPK*WDYRCE
Trigger: CTCACACCTATAATCCCAGCACTTTGGGAGGTCGAT...AGCTCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357613.8
ENST00000561878.2
CDS-3UTR GCA 90 bp AGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACGGGAAGGTTGATATGTaGTGCAGCATAATAGGAACT +
Preference number: 4 (lower is better)
Translates to: RCVVLHVPVHPSCFPLKNGKVDM*CSIIGT
Trigger: AGTTCCTATTATGCTGCAGCACATATCAACCTTCCC...GTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp CAAAATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTGTGAGGGCTTCAAATaGTATCATTTCCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: QNEEKAEMCCPSCSCSSKCEGFK*YHFLPC
Trigger: GCAGGGAAGGAAATGATACCATTTGAAGCCCTCACA...CTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CCA 90 bp AATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGTGTGAGGGCTTCAAATaGTATCATTTCCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: NEEKAEMCCPSCSCSSKLCEGFK*YHFLPC
Trigger: GCAGGGAAGGAAATGATACCATTTGAAGCCCTCACA...CAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CCA 90 bp GCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAACTTTAGGCACTTTCTaGGAGTTGATACCCAATACT +
Preference number: 4 (lower is better)
Translates to: AEMCCPSCSCSSKLLPFETLGTF*ELIPNT
Trigger: AGTATTGGGTATCAACTCCCAGAAAGTGCCTAAAGT...TTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CCA 90 bp AAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTACTTTAGGCACTTTCTaGGAGTTGATACCCAATACT +
Preference number: 4 (lower is better)
Translates to: KRLRCVVLHVPVHPSCFPTLGTF*ELIPNT
Trigger: AGTATTGGGTATCAACTCCCAGAAAGTGCCTAAAGT...AGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CCA 90 bp CAGATAACCACCACCACTACCACCACACTGATTGTATTCCATACAAAACAGTTTTTCTATGAGTTTCCCTaGCAAATTGGTCCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: QITTTTTTTLIVFHTKQFFYEFP*QIGPPD
Trigger: GTCAGGAGGACCAATTTGCCAGGGAAACTCATAGAA...AAACTGTTTTGTATGGAATACAATCAGTGTGGTGGTAGTGGTGGTGGTTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357613.8
ENST00000561878.2
CDS-3UTR CCA 90 bp AAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTGGGCCCACTAACTACTaGTCTATATGTTTAGTGTAT +
Preference number: 4 (lower is better)
Translates to: KRLRCVVLHVPVHPSCFPGPTNY*SICLVY
Trigger: ATACACTAAACATATAGACCAGTAGTTAGTGGGCCC...AGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp CCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACCGACATTTCTGCATATaGTCTGCTAATGGCACCGAT +
Preference number: 4 (lower is better)
Translates to: PSCSCSSKLLPFEELRKHRHFCI*SANGTD
Trigger: ATCGGTGCCATTAGCAGACCATATGCAGAAATGTCG...GTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp GCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAACATACTCTGCTCATTTaGAATAAACCAGTATCTTCC +
Preference number: 4 (lower is better)
Translates to: AEMCCPSCSCSSKLLPFEHTLLI*NKPVSS
Trigger: GGAAGATACTGGTTTATTTCAAATGAGCAGAGTATG...TTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp AGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACGAGTGGGTACATATCTaGACATTAAACTTTAGGCAC +
Preference number: 4 (lower is better)
Translates to: RCVVLHVPVHPSCFPLKNEWVHI*TLNFRH
Trigger: GTGCCTAAAGTTTAATGTTCAGATATGTACCCACTC...GTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp CCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACCCACTACCACCACACTaGTTGTATTCCATACAAAAC +
Preference number: 4 (lower is better)
Translates to: PSCSCSSKLLPFEELRKHPLPPH*LYSIQN
Trigger: GTTTTGTATGGAATACAATCAGTGTGGTGGTAGTGG...GTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp GCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAATGTAATTCTTTTCTATaGGTTTCCCTGGCAAATTGG +
Preference number: 4 (lower is better)
Translates to: AEMCCPSCSCSSKLLPFECNSFL*VSLANW
Trigger: CCAATTTGCCAGGGAAACTCATAGAAAAGAATTACA...TTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357613.8
ENST00000561878.2
CDS-3UTR TCA 90 bp CCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACATTCTTCCATCTGAGTaGCCACCCCCAAATAATTCT +
Preference number: 4 (lower is better)
Translates to: PSCSCSSKLLPFEELRKHILPSE*PPPNNS
Trigger: AGAATTATTTGGGGGTGGTCACTCAGATGGAAGAAT...GTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp TTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGCTTCAAAATTGAAGTCAGGAGTTTaGGACCAGCCTGTCCAACAT +
Preference number: 4 (lower is better)
Translates to: LVENNRSPHKSSILGASKLKSGV*DQPVQH
Trigger: ATGTTGGACAGGCTGGTCTCAAACTCCTGACTTCAA...TTTTGAAGCTCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp CTTCAAAATATGCGACATCTCACAGAATACTGTAAATTTCAGTGCAAAGGATGCTTGAAGTCAGGAGTTTaGGACCAGCCTGTCCAACAT +
Preference number: 4 (lower is better)
Translates to: LQNMRHLTEYCKFQCKGCLKSGV*DQPVQH
Trigger: ATGTTGGACAGGCTGGTCTCAAACTCCTGACTTCAA...GCATCCTTTGCACTGAAATTTACAGTATTCTGTGAGATGTCGCATATTTTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp CTTATGTGTGCCTCAATGTCCAAACAAATCTGGCTTAAAATTTCCAACTCAAGCAACCTACCATATTTGTaGTGTCTGAGGGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LMCASMSKQIWLKISNSSNLPYL*CLRVKR
Trigger: CCTCTTCACCCTCAGACATCACAAATATGGTAGGTT...GCTTGAGTTGGAAATTTTAAGCCAGATTTGTTTGGACATTGAGGCACACATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561878.2
ENST00000569540.5
CDS-3UTR GCA 90 bp TTTAAATGGAATAGATACGTTCATGTGTATATGACCTCATGGGCTGTTAAGCCTGAGAGAAGACACCAGTaGCCACAGGAATACACCATA +
Preference number: 4 (lower is better)
Translates to: FKWNRYVHVYMTSWAVKPERRHQ*PQEYTI
Trigger: TATGGTGTATTCCTGTGGGCACTGGTGTCTTCTCTC...AGGCTTAACAGCCCATGAGGTCATATACACATGAACGTATCTATTCCATTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000569540.5
CDS-3UTR GCA 90 bp GCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTGAGAGAAGACACCAGTaGCCACAGGAATACACCATA +
Preference number: 4 (lower is better)
Translates to: AKRLVLVENNRSPHKSSIERRHQ*PQEYTI
Trigger: TATGGTGTATTCCTGTGGGCACTGGTGTCTTCTCTC...AATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR GCA 90 bp AGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGATATCATTTCCTTCCCTaGTGCTCGGTAAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: RLVLVENNRSPHKSSILGYHFLP*CSVNSS
Trigger: GCTGGAGTTTACCGAGCAGCAGGGAAGGAAATGATA...TCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR GCA 90 bp AGAAAGCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTTATCATTTCCTTCCCTaGTGCTCGGTAAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: RKPKDLFWLRTIGVHISLYHFLP*CSVNSS
Trigger: GCTGGAGTTTACCGAGCAGCAGGGAAGGAAATGATA...AAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR GCA 90 bp AGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGCAGCATAAGGATGTATaGTATAGAGTAGCTAAAATC +
Preference number: 4 (lower is better)
Translates to: RLRCVVLHVPVHPSCFPLQHKDV*YRVAKI
Trigger: GATTTTAGCTACTCTATAGCATACATCCTTATGCTG...CAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR GCA 90 bp CAAAATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTACTGTAAATTTCAGTaGAAAGGATGCCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: QNEEKAEMCCPSCSCSSKYCKFQ*KGCHPR
Trigger: TCTGGGGTGGCATCCTTTGCACTGAAATTTACAGTA...CTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR GCA 90 bp AGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGCTACTTATAAGTTTCTaGCCGTGTATATGTCACTAT +
Preference number: 4 (lower is better)
Translates to: RLRCVVLHVPVHPSCFPLLLISF*PCICHY
Trigger: ATAGTGACATATACACGGGCAGAAACTTATAAGTAG...CAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp CAGATAACCACCACCACTACCACCACACTGATTGTATTCCATACAAAACAGTTTGGGAAGGTTGATATGTaGTGCAGCATAATAGGAACT +
Preference number: 4 (lower is better)
Translates to: QITTTTTTTLIVFHTKQFGKVDM*CSIIGT
Trigger: AGTTCCTATTATGCTGCAGCACATATCAACCTTCCC...AAACTGTTTTGTATGGAATACAATCAGTGTGGTGGTAGTGGTGGTGGTTATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp CCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACAGTACACGACATTTCTaGATATGGTCTGCTAATGGC +
Preference number: 4 (lower is better)
Translates to: PSCSCSSKLLPFEELRKHSTRHF*IWSANG
Trigger: GCCATTAGCAGACCATATGCAGAAATGTCGTGTACT...GTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp CAAAATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGAGTACACGACATTTCTaGATATGGTCTGCTAATGGC +
Preference number: 4 (lower is better)
Translates to: QNEEKAEMCCPSCSCSSKSTRHF*IWSANG
Trigger: GCCATTAGCAGACCATATGCAGAAATGTCGTGTACT...CTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp AATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGAAACCAAAGCACAGCTaGGGGAGGATATTTCTAAGA +
Preference number: 4 (lower is better)
Translates to: NEEKAEMCCPSCSCSSKLKPKHS*GRIFLR
Trigger: TCTTAGAAATATCCTCCCCCAGCTGTGCTTTGGTTT...CAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp TTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGCTTCAAAAAATACAAAAATTAGCTaGGCCTTGTGGCGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LVENNRSPHKSSILGASKNTKIS*ALWRVP
Trigger: TGGCACCCGCCACAAGGCCCAGCTAATTTTTGTATT...TTTTGAAGCTCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp AGAAAGCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTAATACAAAAATTAGCTaGGCCTTGTGGCGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: RKPKDLFWLRTIGVHISLNTKIS*ALWRVP
Trigger: TGGCACCCGCCACAAGGCCCAGCTAATTTTTGTATT...AAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGCTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp CTTATGTGTGCCTCAATGTCCAAACAAATCTGGCTTAAAATTTCCAACTCAAGCCGACATTTCTGCATATaGTCTGCTAATGGCACCGAT +
Preference number: 4 (lower is better)
Translates to: LMCASMSKQIWLKISNSSRHFCI*SANGTD
Trigger: ATCGGTGCCATTAGCAGACCATATGCAGAAATGTCG...GCTTGAGTTGGAAATTTTAAGCCAGATTTGTTTGGACATTGAGGCACACATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp AGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGATTCCAGCAGTAATTaGTCCCACGATGCCCATCAA +
Preference number: 4 (lower is better)
Translates to: RLVLVENNRSPHKSSILGDSSSN*SHDAHQ
Trigger: TTGATGGGCATCGTGGGACCAATTACTGCTGGAATC...TCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561878.2
ENST00000567796.1
ENST00000569540.5
CDS-3UTR TCA 90 bp AGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACCAAGTTGCTTCCCTTTaGAGAACTAAGAAAACACTA +
Preference number: 4 (lower is better)
Translates to: RCVVLHVPVHPSCFPLKNQVASL*RTKKTL
Trigger: TAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTG...GTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp CCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACGAGTGGGTACATATCTaGACATTAAACTTTAGGCAC +
Preference number: 4 (lower is better)
Translates to: PSCSCSSKLLPFEELRKHEWVHI*TLNFRH
Trigger: GTGCCTAAAGTTTAATGTTCAGATATGTACCCACTC...GTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp CTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGCTATTCTTCCATCTGAGTaGCCACCCCCAAATAATTCT +
Preference number: 4 (lower is better)
Translates to: LVLVENNRSPHKSSILGAILPSE*PPPNNS
Trigger: AGAATTATTTGGGGGTGGTCACTCAGATGGAAGAAT...AGCTCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp CAAAATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGAAAGTTAAGCTGATCTaGGTCACAACCAGCCTTATA +
Preference number: 4 (lower is better)
Translates to: QNEEKAEMCCPSCSCSSKKVKLI*VTTSLI
Trigger: TATAAGGCTGGTTGTGACTCAGATCAGCTTAACTTT...CTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp AAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTATTACATCCAAAGAATaGTTTAGGCAAGAACTCCTT +
Preference number: 4 (lower is better)
Translates to: KRLRCVVLHVPVHPSCFPITSKE*FRQELL
Trigger: AAGGAGTTCTTGCCTAAAGCATTCTTTGGATGTAAT...AGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp TTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGCTTCAAAAAACTCCAGCAATAGCTaGACTTGTCAAGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: LVENNRSPHKSSILGASKNSSNS*TCQDSS
Trigger: GCTGGAATCTTGACAAGTGCAGCTATTGCTGGAGTT...TTTTGAAGCTCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000561878.2
ENST00000567796.1
ENST00000569540.5
CDS-3UTR GCA 90 bp CTTCAAAATATGCGACATCTCACAGAATACTGTAAATTTCAGTGCAAAGGATGCAACTCCAGCAATAGCTaGACTTGTCAAGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: LQNMRHLTEYCKFQCKGCNSSNS*TCQDSS
Trigger: GCTGGAATCTTGACAAGTGCAGCTATTGCTGGAGTT...GCATCCTTTGCACTGAAATTTACAGTATTCTGTGAGATGTCGCATATTTTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561878.2
ENST00000567796.1
ENST00000569540.5
CDS-3UTR GCA 90 bp TTTAAATGGAATAGATACGTTCATGTGTATATGACCTCATGGGCTGTTAAGCCTAACTCCAGCAATAGCTaGACTTGTCAAGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: FKWNRYVHVYMTSWAVKPNSSNS*TCQDSS
Trigger: GCTGGAATCTTGACAAGTGCAGCTATTGCTGGAGTT...AGGCTTAACAGCCCATGAGGTCATATACACATGAACGTATCTATTCCATTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561878.2
ENST00000569540.5
CDS-3UTR CCA 90 bp TTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGCTTCAAAATGTGAGGGCTTCAAATaGTATCATTTCCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LVENNRSPHKSSILGASKCEGFK*YHFLPC
Trigger: GCAGGGAAGGAAATGATACCATTTGAAGCCCTCACA...TTTTGAAGCTCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CCA 90 bp AGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGATGTGAGGGCTTCAAATaGTATCATTTCCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: RLVLVENNRSPHKSSILGCEGFK*YHFLPC
Trigger: GCAGGGAAGGAAATGATACCATTTGAAGCCCTCACA...TCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CCA 90 bp TCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACTACACTCCACTTCACCTACTGGGATaGATGAAACACTCAGTAATT +
Preference number: 4 (lower is better)
Translates to: SCSSKLLPFEELRKHYTPLHLLG*MKHSVI
Trigger: AATTACTGAGTGTTTCATCCATCCCAGTAGGTGAAG...TGGAGTGTAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp CAAAATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGCTTCACCTACTGGGATaGATGAAACACTCAGTAATT +
Preference number: 4 (lower is better)
Translates to: QNEEKAEMCCPSCSCSSKLHLLG*MKHSVI
Trigger: AATTACTGAGTGTTTCATCCATCCCAGTAGGTGAAG...CTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp TTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGCTTCAAAACGACATTTCTGCATATaGTCTGCTAATGGCACCGAT +
Preference number: 4 (lower is better)
Translates to: LVENNRSPHKSSILGASKRHFCI*SANGTD
Trigger: ATCGGTGCCATTAGCAGACCATATGCAGAAATGTCG...TTTTGAAGCTCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp CCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACCAAGTTGCTTCCCTTTaGAGAACTAAGAAAACACTA +
Preference number: 4 (lower is better)
Translates to: PSCSCSSKLLPFEELRKHQVASL*RTKKTL
Trigger: TAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTG...GTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp CAAAATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGCAAGTTGCTTCCCTTTaGAGAACTAAGAAAACACTA +
Preference number: 4 (lower is better)
Translates to: QNEEKAEMCCPSCSCSSKQVASL*RTKKTL
Trigger: TAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTG...CTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp TCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACTACACTCCACATACTCTGCTCATTTaGAATAAACCAGTATCTTCC +
Preference number: 4 (lower is better)
Translates to: SCSSKLLPFEELRKHYTPHTLLI*NKPVSS
Trigger: GGAAGATACTGGTTTATTTCAAATGAGCAGAGTATG...TGGAGTGTAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp CAAAATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGCATACTCTGCTCATTTaGAATAAACCAGTATCTTCC +
Preference number: 4 (lower is better)
Translates to: QNEEKAEMCCPSCSCSSKHTLLI*NKPVSS
Trigger: GGAAGATACTGGTTTATTTCAAATGAGCAGAGTATG...CTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp CTTATGTGTGCCTCAATGTCCAAACAAATCTGGCTTAAAATTTCCAACTCAAGCGAGTGGGTACATATCTaGACATTAAACTTTAGGCAC +
Preference number: 4 (lower is better)
Translates to: LMCASMSKQIWLKISNSSEWVHI*TLNFRH
Trigger: GTGCCTAAAGTTTAATGTTCAGATATGTACCCACTC...GCTTGAGTTGGAAATTTTAAGCCAGATTTGTTTGGACATTGAGGCACACATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp AAAGCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCACCACTACCACCACACTaGTTGTATTCCATACAAAAC +
Preference number: 4 (lower is better)
Translates to: KAKRLVLVENNRSPHKSSPLPPH*LYSIQN
Trigger: GTTTTGTATGGAATACAATCAGTGTGGTGGTAGTGG...TGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp CAAAATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGCAAATAGTCTTTCCCTaGAAACATTTCAAGCTACAC +
Preference number: 4 (lower is better)
Translates to: QNEEKAEMCCPSCSCSSKQIVFP*KHFKLH
Trigger: GTGTAGCTTGAAATGTTTTCAGGGAAAGACTATTTG...CTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp AATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCAAATAGTCTTTCCCTaGAAACATTTCAAGCTACAC +
Preference number: 4 (lower is better)
Translates to: NEEKAEMCCPSCSCSSKLQIVFP*KHFKLH
Trigger: GTGTAGCTTGAAATGTTTTCAGGGAAAGACTATTTG...CAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp AGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAATTCTTCCATCTGAGTaGCCACCCCCAAATAATTCT +
Preference number: 4 (lower is better)
Translates to: RLVLVENNRSPHKSSILGILPSE*PPPNNS
Trigger: AGAATTATTTGGGGGTGGTCACTCAGATGGAAGAAT...TCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp CTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGCTTTACTTAGGGAAGGTTaGTATGTGCTGCAGCATAAT +
Preference number: 4 (lower is better)
Translates to: LVLVENNRSPHKSSILGALLREG*YVLQHN
Trigger: ATTATGCTGCAGCACATATCAACCTTCCCTAAGTAA...AGCTCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp CTTATGTGTGCCTCAATGTCCAAACAAATCTGGCTTAAAATTTCCAACTCAAGCGGATGCTTACAGACATaGACCTACCATATTTGTGAT +
Preference number: 4 (lower is better)
Translates to: LMCASMSKQIWLKISNSSGCLQT*TYHICD
Trigger: ATCACAAATATGGTAGGTTCATGTCTGTAAGCATCC...GCTTGAGTTGGAAATTTTAAGCCAGATTTGTTTGGACATTGAGGCACACATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561878.2
ENST00000569540.5
CDS-3UTR GCA 90 bp AGAAAGCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTTACTGTAAATTTCAGTaGAAAGGATGCCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: RKPKDLFWLRTIGVHISLYCKFQ*KGCHPR
Trigger: TCTGGGGTGGCATCCTTTGCACTGAAATTTACAGTA...AAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CCA 90 bp TTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGCTTCAAAACAGAGACTCTCCTCCTaGCTATTTTTAATCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LVENNRSPHKSSILGASKQRLSS*LFLIRS
Trigger: GCTTCTGATTAAAAATAGCCAGGAGGAGAGTCTCTG...TTTTGAAGCTCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000569540.5
CDS-3UTR CCA 90 bp CTTATGTGTGCCTCAATGTCCAAACAAATCTGGCTTAAAATTTCCAACTCAAGCGGGCCCACTAACTACTaGTCTATATGTTTAGTGTAT +
Preference number: 4 (lower is better)
Translates to: LMCASMSKQIWLKISNSSGPTNY*SICLVY
Trigger: ATACACTAAACATATAGACCAGTAGTTAGTGGGCCC...GCTTGAGTTGGAAATTTTAAGCCAGATTTGTTTGGACATTGAGGCACACATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp AGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAAAAGTTAAGCTGATCTaGGTCACAACCAGCCTTATA +
Preference number: 4 (lower is better)
Translates to: RLVLVENNRSPHKSSILGKVKLI*VTTSLI
Trigger: TATAAGGCTGGTTGTGACTCAGATCAGCTTAACTTT...TCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp CTTCAAAATATGCGACATCTCACAGAATACTGTAAATTTCAGTGCAAAGGATGCAAAGTTAAGCTGATCTaGGTCACAACCAGCCTTATA +
Preference number: 4 (lower is better)
Translates to: LQNMRHLTEYCKFQCKGCKVKLI*VTTSLI
Trigger: TATAAGGCTGGTTGTGACTCAGATCAGCTTAACTTT...GCATCCTTTGCACTGAAATTTACAGTATTCTGTGAGATGTCGCATATTTTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp AAAGCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAGGATGCTTACAGACATaGACCTACCATATTTGTGAT +
Preference number: 4 (lower is better)
Translates to: KAKRLVLVENNRSPHKSSGCLQT*TYHICD
Trigger: ATCACAAATATGGTAGGTTCATGTCTGTAAGCATCC...TGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000561878.2
ENST00000567796.1
ENST00000569540.5
CDS-3UTR GCA 90 bp TTTAAATGGAATAGATACGTTCATGTGTATATGACCTCATGGGCTGTTAAGCCTAACTCCAGCAATAGCTaGACCATATTTGTGATGTCT +
Preference number: 4 (lower is better)
Translates to: FKWNRYVHVYMTSWAVKPNSSNS*TIFVMS
Trigger: AGACATCACAAATATGGTGCAGCTATTGCTGGAGTT...AGGCTTAACAGCCCATGAGGTCATATACACATGAACGTATCTATTCCATTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357613.8
CDS-3UTR GCA 90 bp TTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGCTTCAAAAAACTCCAGCAATAGCTaGACCATATTTGTGATGTCT +
Preference number: 4 (lower is better)
Translates to: LVENNRSPHKSSILGASKNSSNS*TIFVMS
Trigger: AGACATCACAAATATGGTGCAGCTATTGCTGGAGTT...TTTTGAAGCTCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000566980.1
ENST00000568559.1
CDS-3UTR GCA 90 bp CTTCAAAATATGCGACATCTCACAGAATACTGTAAATTTCAGTGCAAAGGATGCAACTCCAGCAATAGCTaGACCATATTTGTGATGTCT +
Preference number: 4 (lower is better)
Translates to: LQNMRHLTEYCKFQCKGCNSSNS*TIFVMS
Trigger: AGACATCACAAATATGGTGCAGCTATTGCTGGAGTT...GCATCCTTTGCACTGAAATTTACAGTATTCTGTGAGATGTCGCATATTTTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357613.8
ENST00000568559.1
CDS-3UTR GCA 90 bp CCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACCAGCATAAGGATGTATaGTATAGAGTAGCTAAAATC +
Preference number: 4 (lower is better)
Translates to: PSCSCSSKLLPFEELRKHQHKDV*YRVAKI
Trigger: GATTTTAGCTACTCTATAGCATACATCCTTATGCTG...GTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR GCA 90 bp CAAAATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGAGCCAGAGTGTGTATTaGTTTAAATGGAATAGATAC +
Preference number: 4 (lower is better)
Translates to: QNEEKAEMCCPSCSCSSKSQSVY*FKWNRY
Trigger: GTATCTATTCCATTTAAAGCAATACACACTCTGGCT...CTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000569540.5
CDS-3UTR GCA 90 bp AATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTACTTATAAGTTTCTaGCCGTGTATATGTCACTAT +
Preference number: 4 (lower is better)
Translates to: NEEKAEMCCPSCSCSSKLLLISF*PCICHY
Trigger: ATAGTGACATATACACGGGCAGAAACTTATAAGTAG...CAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp AGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGGGCCCACTAACTACTaGTCTATATGTTTAGTGTAT +
Preference number: 4 (lower is better)
Translates to: RLVLVENNRSPHKSSILGGPTNY*SICLVY
Trigger: ATACACTAAACATATAGACCAGTAGTTAGTGGGCCC...TCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CCA 90 bp CTTCAAAATATGCGACATCTCACAGAATACTGTAAATTTCAGTGCAAAGGATGCCTTCACCTACTGGGATaGATGAAACACTCAGTAATT +
Preference number: 4 (lower is better)
Translates to: LQNMRHLTEYCKFQCKGCLHLLG*MKHSVI
Trigger: AATTACTGAGTGTTTCATCCATCCCAGTAGGTGAAG...GCATCCTTTGCACTGAAATTTACAGTATTCTGTGAGATGTCGCATATTTTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR TCA 90 bp AGAAAGCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAAGTTGCTTCCCTTTaGAGAACTAAGAAAACACTA +
Preference number: 4 (lower is better)
Translates to: RKPKDLFWLRTIGVHISLQVASL*RTKKTL
Trigger: TAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTG...AAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGCTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp TTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGCTTCAAAACAAGTTGCTTCCCTTTaGAGAACTAAGAAAACACTA +
Preference number: 4 (lower is better)
Translates to: LVENNRSPHKSSILGASKQVASL*RTKKTL
Trigger: TAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTG...TTTTGAAGCTCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp AGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGACATACTCTGCTCATTTaGAATAAACCAGTATCTTCC +
Preference number: 4 (lower is better)
Translates to: RLVLVENNRSPHKSSILGHTLLI*NKPVSS
Trigger: GGAAGATACTGGTTTATTTCAAATGAGCAGAGTATG...TCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR TCA 90 bp CTTCAAAATATGCGACATCTCACAGAATACTGTAAATTTCAGTGCAAAGGATGCTGTAATTCTTTTCTATaGGTTTCCCTGGCAAATTGG +
Preference number: 4 (lower is better)
Translates to: LQNMRHLTEYCKFQCKGCCNSFL*VSLANW
Trigger: CCAATTTGCCAGGGAAACTCATAGAAAAGAATTACA...GCATCCTTTGCACTGAAATTTACAGTATTCTGTGAGATGTCGCATATTTTGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357613.8
ENST00000561878.2
CDS-3UTR TCA 90 bp GCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCAAATAGTCTTTCCCTaGAAACATTTCAAGCTACAC +
Preference number: 4 (lower is better)
Translates to: AKRLVLVENNRSPHKSSIQIVFP*KHFKLH
Trigger: GTGTAGCTTGAAATGTTTTCAGGGAAAGACTATTTG...AATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp CTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGCTCAGCATAAGGATGTATaGTATAGAGTAGCTAAAATC +
Preference number: 4 (lower is better)
Translates to: LVLVENNRSPHKSSILGAQHKDV*YRVAKI
Trigger: GATTTTAGCTACTCTATAGCATACATCCTTATGCTG...AGCTCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR GCA 90 bp CTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGCTATTACATCCAAAGAATaGTTTAGGCAAGAACTCCTT +
Preference number: 4 (lower is better)
Translates to: LVLVENNRSPHKSSILGAITSKE*FRQELL
Trigger: AAGGAGTTCTTGCCTAAAGCATTCTTTGGATGTAAT...AGCTCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp AAAGCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCACAGCATAAGGATGTATaGTATAGAGTAGCTAAAATC +
Preference number: 4 (lower is better)
Translates to: KAKRLVLVENNRSPHKSSQHKDV*YRVAKI
Trigger: GATTTTAGCTACTCTATAGCATACATCCTTATGCTG...TGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR GCA 90 bp AAAGCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAAGCCAGAGTGTGTATTaGTTTAAATGGAATAGATAC +
Preference number: 4 (lower is better)
Translates to: KAKRLVLVENNRSPHKSSSQSVY*FKWNRY
Trigger: GTATCTATTCCATTTAAAGCAATACACACTCTGGCT...TGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000569540.5
CDS-3UTR GCA 90 bp AAAGCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCACTACTTATAAGTTTCTaGCCGTGTATATGTCACTAT +
Preference number: 4 (lower is better)
Translates to: KAKRLVLVENNRSPHKSSLLISF*PCICHY
Trigger: ATAGTGACATATACACGGGCAGAAACTTATAAGTAG...TGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR GCA 90 bp CTTCAAAATATGCGACATCTCACAGAATACTGTAAATTTCAGTGCAAAGGATGCATTACATCCAAAGAATaGTTTAGGCAAGAACTCCTT +
Preference number: 4 (lower is better)
Translates to: LQNMRHLTEYCKFQCKGCITSKE*FRQELL
Trigger: AAGGAGTTCTTGCCTAAAGCATTCTTTGGATGTAAT...GCATCCTTTGCACTGAAATTTACAGTATTCTGTGAGATGTCGCATATTTTGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp AGACCCTGTCTGGACTTGCAGTTAAAAGGCACTCTTTCCTTCATCCTACTCAGAGGGCACAGGGTCCCGTaGCCCACCCGCGGCACAACC +
Preference number: 5 (lower is better)
Translates to: RPCLDLQLKGTLSFILLRGHRVP*PTRGTT
Trigger: GGTTGTGCCGCGGGTGGGCAACGGGACCCTGTGCCC...TCTGAGTAGGATGAAGGAAAGAGTGCCTTTTAACTGCAAGTCCAGACAGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569276.1
CDS GCA 90 bp CAGGAATACACCATACCACATCGTGTTGCCCAGGCTGGTCTTGAATaGCTCGGCTCAAACAATCCGCCCAACTTGGCCTCCTCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: QEYTIPHRVAQAGLE*LGSNNPPNLASSLQ
Trigger: CTGAAGGGAGGAGGCCAAGTTGGGCGGATTGTTTGAGCCGAGGCATTCAAGACCAGCCTGGGCAACACGATGTGGTATGGTGTATTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567796.1
CDS-3UTR CAA 90 bp CACTCCGGCCTTGGTGACATAGGGAGACCCTGTCTGGACTTGCAGTTAAAAGGCATGGAGGAGGATTACTaGAGCCCAAGAGGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: HSGLGDIGRPCLDLQLKGMEEDY*SPRGGG
Trigger: GCCTCCACCTCTTGGGCTCAAGTAATCCTCCTCCAT...GCCTTTTAACTGCAAGTCCAGACAGGGTCTCCCTATGTCACCAAGGCCGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569276.1
CDS-3UTR CAA 90 bp AATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGGGGCACAGGGTCCCGTaGCCCACCCGCGGCACAACC +
Preference number: 5 (lower is better)
Translates to: NEEKAEMCCPSCSCSSKLGHRVP*PTRGTT
Trigger: GGTTGTGCCGCGGGTGGGCAACGGGACCCTGTGCCC...CAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp CAAAATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGGGGCACAGGGTCCCGTaGCCCACCCGCGGCACAACC +
Preference number: 5 (lower is better)
Translates to: QNEEKAEMCCPSCSCSSKGHRVP*PTRGTT
Trigger: GGTTGTGCCGCGGGTGGGCAACGGGACCCTGTGCCC...CTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp AGAAAGCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTGGGCACAGGGTCCCGTaGCCCACCCGCGGCACAACC +
Preference number: 5 (lower is better)
Translates to: RKPKDLFWLRTIGVHISLGHRVP*PTRGTT
Trigger: GGTTGTGCCGCGGGTGGGCAACGGGACCCTGTGCCC...AAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp TCTGCATATGGTCTGCTAATGGCACCGATGCTTCACATTCCAGGAAATGGTTACCAGAGGGAAGTAGAGTaGGGGCACAGGGTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: SAYGLLMAPMLHIPGNGYQREVE*GHRVPL
Trigger: CAACGGGACCCTGTGCCCCAACTCTACTTCCCTCTG...GTAACCATTTCCTGGAATGTGAAGCATCGGTGCCATTAGCAGACCATATGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp TCTGCATATGGTCTGCTAATGGCACCGATGCTTCACATTCCAGGAAATGGTTACAGGCAGGAGAATCGCTaGAACCCGGGTGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: SAYGLLMAPMLHIPGNGYRQENR*NPGGRG
Trigger: ACCTCTGCCACCCGGGTTCAAGCGATTCTCCTGCCT...GTAACCATTTCCTGGAATGTGAAGCATCGGTGCCATTAGCAGACCATATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp GGATGCCACCCCAGAGACACTGTTGACTTGGCTTGGGTAAAGGTACACATGAAAAGGCAGGACAATCACTaGAACCCAGGAAACGGAGGC +
Preference number: 5 (lower is better)
Translates to: GCHPRDTVDLAWVKVHMKRQDNH*NPGNGG
Trigger: GCCTCCGTTTCCTGGGTTCAAGTGATTGTCCTGCCT...TTTCATGTGTACCTTTACCCAAGCCAAGTCAACAGTGTCTCTGGGGTGGCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS GCA 90 bp AGTGCCCAGTGTGAGGGCTTCAAATGGTATCATTTCCTTCCCTGCTaGTCGGTAAACTCCAGCAATAGCTGCACTTGTCAAGATTCCAGC +
Preference number: 5 (lower is better)
Translates to: SAQCEGFKWYHFLPC*SVNSSNSCTCQDSS
Trigger: GCTGGAATCTTGACAAGTGCAGCTATTGCTGGAGTTTACCGAGCAGCAGGGAAGGAAATGATACCATTTGAAGCCCTCACACTGGGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561878.2
ENST00000567796.1
ENST00000569540.5
CDS GCA 90 bp TCCAGTGCCCAGTGTGAGGGCTTCAAATGGTATCATTTCCTTCCCTaGTGCTCGGTAAACTCCAGCAATAGCTGCACTTGTCAAGATTCC +
Preference number: 5 (lower is better)
Translates to: SSAQCEGFKWYHFLP*CSVNSSNSCTCQDS
Trigger: GGAATCTTGACAAGTGCAGCTATTGCTGGAGTTTACCGAGCAGCAGGGAAGGAAATGATACCATTTGAAGCCCTCACACTGGGCACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561878.2
ENST00000567796.1
ENST00000569540.5
CDS CCA 90 bp CAAGACGCAAAATGTCTGTCCAGTGCCCAGTGTGAGGGCTTCAAATaGTATCATTTCCTTCCCTGCTGCTCGGTAAACTCCAGCAATAGC +
Preference number: 5 (lower is better)
Translates to: QDAKCLSSAQCEGFK*YHFLPCCSVNSSNS
Trigger: GCTATTGCTGGAGTTTACCGAGCAGCAGGGAAGGAAATGATACCATTTGAAGCCCTCACACTGGGCACTGGACAGACATTTTGCGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CAA 90 bp TCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACTACACTCCATATAGTCCCATCACGTaGGGAGGCCGAGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: SCSSKLLPFEELRKHYTPYSPIT*GGRGGW
Trigger: CCACCCGCCTCGGCCTCCCAACGTGATGGGACTATA...TGGAGTGTAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp CCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACTATAGTCCCATCACGTaGGGAGGCCGAGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: PSCSCSSKLLPFEELRKHYSPIT*GGRGGW
Trigger: CCACCCGCCTCGGCCTCCCAACGTGATGGGACTATA...GTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp AGACCCTGTCTGGACTTGCAGTTAAAAGGCACTCTTTCCTTCATCCTACTCAGATGCAGTGAGCCAATATaGCAACCACTGCACTCCGGC +
Preference number: 5 (lower is better)
Translates to: RPCLDLQLKGTLSFILLRCSEPI*QPLHSG
Trigger: GCCGGAGTGCAGTGGTTGCAATATTGGCTCACTGCA...TCTGAGTAGGATGAAGGAAAGAGTGCCTTTTAACTGCAAGTCCAGACAGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569276.1
CDS GCA 90 bp TCCAGTGCCCAGTGTGAGGGCTTCAAATGGTATCATTTCCTTCCCTaGTGCTCGGTAAACTCCAGCAATAGCTGCACCATATTTGTGATG +
Preference number: 5 (lower is better)
Translates to: SSAQCEGFKWYHFLP*CSVNSSNSCTIFVM
Trigger: CATCACAAATATGGTGCAGCTATTGCTGGAGTTTACCGAGCAGCAGGGAAGGAAATGATACCATTTGAAGCCCTCACACTGGGCACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000566980.1
ENST00000568559.1
CDS-3UTR CAA 90 bp AAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGCCCAGGCCAGTCTaGAACTCTTGGGCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: KRLRCVVLHVPVHPSCFPLPRPV*NSWAQA
Trigger: TGCTTGAGCCCAAGAGTTCAAGACTGGCCTGGGCAA...AGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp GCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAAGGCGGGTCAGGAGATaGAGACCATCCTGGCTAACA +
Preference number: 5 (lower is better)
Translates to: AEMCCPSCSCSSKLLPFERRVRR*RPSWLT
Trigger: TGTTAGCCAGGATGGTCTCAATCTCCTGACCCGCCT...TTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp AAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTAGGCGGGTCAGGAGATaGAGACCATCCTGGCTAACA +
Preference number: 5 (lower is better)
Translates to: KRLRCVVLHVPVHPSCFPRRVRR*RPSWLT
Trigger: TGTTAGCCAGGATGGTCTCAATCTCCTGACCCGCCT...AGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp TCTGCATATGGTCTGCTAATGGCACCGATGCTTCACATTCCAGGAAATGGTTACAAAATTAGCTGGGCCTaGTGGCGGGTGCCAGTAATC +
Preference number: 5 (lower is better)
Translates to: SAYGLLMAPMLHIPGNGYKISWA*WRVPVI
Trigger: GATTACTGGCACCCGCCACAAGGCCCAGCTAATTTT...GTAACCATTTCCTGGAATGTGAAGCATCGGTGCCATTAGCAGACCATATGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS GCA 90 bp AGTGCCCAGTGTGAGGGCTTCAAATGGTATCATTTCCTTCCCTGCTaGTCGGTAAACTCCAGCAATAGCTGCACCATATTTGTGATGTCT +
Preference number: 5 (lower is better)
Translates to: SAQCEGFKWYHFLPC*SVNSSNSCTIFVMS
Trigger: AGACATCACAAATATGGTGCAGCTATTGCTGGAGTTTACCGAGCAGCAGGGAAGGAAATGATACCATTTGAAGCCCTCACACTGGGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000566980.1
ENST00000568559.1
CDS-3UTR CAA 90 bp CTTATGTGTGCCTCAATGTCCAAACAAATCTGGCTTAAAATTTCCAACTCAAGCAGGCAGGAGAATCGCTaGAACCCGGGTGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: LMCASMSKQIWLKISNSSRQENR*NPGGRG
Trigger: ACCTCTGCCACCCGGGTTCAAGCGATTCTCCTGCCT...GCTTGAGTTGGAAATTTTAAGCCAGATTTGTTTGGACATTGAGGCACACATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CAA 90 bp GCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAACAAGGTCTCACTATGTaGCCCAGGCCAGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: AEMCCPSCSCSSKLLPFEQGLTM*PRPVLN
Trigger: GTTCAAGACTGGCCTGGGCAACATAGTGAGACCTTG...TTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp TTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGCTTCAAAATATAGTCCCATCACGTaGGGAGGCCGAGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: LVENNRSPHKSSILGASKYSPIT*GGRGGW
Trigger: CCACCCGCCTCGGCCTCCCAACGTGATGGGACTATA...TTTTGAAGCTCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp GACATAGGGAGACCCTGTCTGGACTTGCAGTTAAAAGGCACTCTTTCCTTCATCAGACCCTGTCTGGACTaGCAGTTAAAAGGCACTCTT +
Preference number: 5 (lower is better)
Translates to: DIGRPCLDLQLKGTLSFIRPCLD*QLKGTL
Trigger: AAGAGTGCCTTTTAACTGCAAGTCCAGACAGGGTCT...GATGAAGGAAAGAGTGCCTTTTAACTGCAAGTCCAGACAGGGTCTCCCTATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569276.1
CDS-3UTR CAA 90 bp AAAGCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAAGGCAGGAGAATCGCTaGAACCCGGGTGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: KAKRLVLVENNRSPHKSSRQENR*NPGGRG
Trigger: ACCTCTGCCACCCGGGTTCAAGCGATTCTCCTGCCT...TGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CAA 90 bp AGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACCAAGGTCTCACTATGTaGCCCAGGCCAGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: RCVVLHVPVHPSCFPLKNQGLTM*PRPVLN
Trigger: GTTCAAGACTGGCCTGGGCAACATAGTGAGACCTTG...GTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp CAAAATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGAGGCGGGTCAGGAGATaGAGACCATCCTGGCTAACA +
Preference number: 5 (lower is better)
Translates to: QNEEKAEMCCPSCSCSSKRRVRR*RPSWLT
Trigger: TGTTAGCCAGGATGGTCTCAATCTCCTGACCCGCCT...CTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp AATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGAGGCAGGACAATCACTaGAACCCAGGAAACGGAGGC +
Preference number: 5 (lower is better)
Translates to: NEEKAEMCCPSCSCSSKLRQDNH*NPGNGG
Trigger: GCCTCCGTTTCCTGGGTTCAAGTGATTGTCCTGCCT...CAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp TCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACTACACTCCAAAAATTAGCTGGGCCTaGTGGCGGGTGCCAGTAATC +
Preference number: 5 (lower is better)
Translates to: SCSSKLLPFEELRKHYTPKISWA*WRVPVI
Trigger: GATTACTGGCACCCGCCACAAGGCCCAGCTAATTTT...TGGAGTGTAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp AGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGTCACCAGAAACTATTTaGCAGATAACCACCACCACT +
Preference number: 5 (lower is better)
Translates to: RLRCVVLHVPVHPSCFPLSPETI*QITTTT
Trigger: AGTGGTGGTGGTTATCTGCAAAATAGTTTCTGGTGA...CAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CAA 90 bp GCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTTTGCCCAGGCCAGTCTaGAACTCTTGGGCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: AKRLVLVENNRSPHKSSILPRPV*NSWAQA
Trigger: TGCTTGAGCCCAAGAGTTCAAGACTGGCCTGGGCAA...AATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp AGAAAGCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTTTGCCCAGGCCAGTCTaGAACTCTTGGGCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: RKPKDLFWLRTIGVHISLLPRPV*NSWAQA
Trigger: TGCTTGAGCCCAAGAGTTCAAGACTGGCCTGGGCAA...AAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp TCTGCATATGGTCTGCTAATGGCACCGATGCTTCACATTCCAGGAAATGGTTACAAAGACTTGTTTTGGTaGAGAACAATAGGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: SAYGLLMAPMLHIPGNGYKDLFW*RTIGVH
Trigger: GTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTT...GTAACCATTTCCTGGAATGTGAAGCATCGGTGCCATTAGCAGACCATATGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp GCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGGCACTTTCTGGGAGTaGATACCCAATACTGTAAAA +
Preference number: 5 (lower is better)
Translates to: AEMCCPSCSCSSKLLPFEGTFWE*IPNTVK
Trigger: TTTTACAGTATTGGGTATCAACTCCCAGAAAGTGCC...TTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CAA 90 bp CTTCAAAATATGCGACATCTCACAGAATACTGTAAATTTCAGTGCAAAGGATGCCAAGGTCTCACTATGTaGCCCAGGCCAGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: LQNMRHLTEYCKFQCKGCQGLTM*PRPVLN
Trigger: GTTCAAGACTGGCCTGGGCAACATAGTGAGACCTTG...GCATCCTTTGCACTGAAATTTACAGTATTCTGTGAGATGTCGCATATTTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp AGAAAGCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTAAAATTAGCTGGGCCTaGTGGCGGGTGCCAGTAATC +
Preference number: 5 (lower is better)
Translates to: RKPKDLFWLRTIGVHISLKISWA*WRVPVI
Trigger: GATTACTGGCACCCGCCACAAGGCCCAGCTAATTTT...AAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp GCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCCATACCACATCGTGTaGCCCAGGCTGGTCTTGAAT +
Preference number: 5 (lower is better)
Translates to: AKRLVLVENNRSPHKSSIPYHIV*PRLVLN
Trigger: ATTCAAGACCAGCCTGGGCAACACGATGTGGTATGG...AATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567796.1
CDS-3UTR CAA 90 bp GCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAAAAGACTTGTTTTGGTaGAGAACAATAGGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: AEMCCPSCSCSSKLLPFEKDLFW*RTIGVH
Trigger: GTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTT...TTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CAA 90 bp AGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACGGCACTTTCTGGGAGTaGATACCCAATACTGTAAAA +
Preference number: 5 (lower is better)
Translates to: RCVVLHVPVHPSCFPLKNGTFWE*IPNTVK
Trigger: TTTTACAGTATTGGGTATCAACTCCCAGAAAGTGCC...GTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CAA 90 bp AGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACAAAGACTTGTTTTGGTaGAGAACAATAGGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: RCVVLHVPVHPSCFPLKNKDLFW*RTIGVH
Trigger: GTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTT...GTTCTTCAAAGGGAAGCAACTTGGATGAACAGGAACATGAAGGACAACACATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CAA 90 bp AATGAAGAAAAGGCTGAGATGTGTTGTCCTTCATGTTCCTGTTCATCCAAGTTGTCACCAGAAACTATTTaGCAGATAACCACCACCACT +
Preference number: 5 (lower is better)
Translates to: NEEKAEMCCPSCSCSSKLSPETI*QITTTT
Trigger: AGTGGTGGTGGTTATCTGCAAAATAGTTTCTGGTGA...CAACTTGGATGAACAGGAACATGAAGGACAACACATCTCAGCCTTTTCTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CAA 90 bp TCCTGTTCATCCAAGTTGCTTCCCTTTGAAGAACTAAGAAAACACTACACTCCAGCCTGTGAGAAAGATTaGAGCTTCTTGTTAGGGAAT +
Preference number: 5 (lower is better)
Translates to: SCSSKLLPFEELRKHYTPACEKD*SFLLGN
Trigger: ATTCCCTAACAAGAAGCTCAAATCTTTCTCACAGGC...TGGAGTGTAGTGTTTTCTTAGTTCTTCAAAGGGAAGCAACTTGGATGAACAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp CTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGCTGCCTGTGAGAAAGATTaGAGCTTCTTGTTAGGGAAT +
Preference number: 5 (lower is better)
Translates to: LVLVENNRSPHKSSILGAACEKD*SFLLGN
Trigger: ATTCCCTAACAAGAAGCTCAAATCTTTCTCACAGGC...AGCTCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS-3UTR CAA 90 bp CTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGCTAAAGACTTGTTTTGGTaGAGAACAATAGGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: LVLVENNRSPHKSSILGAKDLFW*RTIGVH
Trigger: GTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTT...AGCTCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CAA 90 bp AGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTCTAGGAGGCACTTTCTGGGAGTaGATACCCAATACTGTAAAA +
Preference number: 5 (lower is better)
Translates to: RLVLVENNRSPHKSSILGGTFWE*IPNTVK
Trigger: TTTTACAGTATTGGGTATCAACTCCCAGAAAGTGCC...TCCTAGAATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CAA 90 bp TTTAAATGGAATAGATACGTTCATGTGTATATGACCTCATGGGCTGTTAAGCCTTCACCAGAAACTATTTaGCAGATAACCACCACCACT +
Preference number: 5 (lower is better)
Translates to: FKWNRYVHVYMTSWAVKPSPETI*QITTTT
Trigger: AGTGGTGGTGGTTATCTGCAAAATAGTTTCTGGTGA...AGGCTTAACAGCCCATGAGGTCATATACACATGAACGTATCTATTCCATTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000569540.5
CDS-3UTR CAA 90 bp CTTCAAAATATGCGACATCTCACAGAATACTGTAAATTTCAGTGCAAAGGATGCTCACCAGAAACTATTTaGCAGATAACCACCACCACT +
Preference number: 5 (lower is better)
Translates to: LQNMRHLTEYCKFQCKGCSPETI*QITTTT
Trigger: AGTGGTGGTGGTTATCTGCAAAATAGTTTCTGGTGA...GCATCCTTTGCACTGAAATTTACAGTATTCTGTGAGATGTCGCATATTTTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569540.5
CDS-3UTR CAA 90 bp TTTAAATGGAATAGATACGTTCATGTGTATATGACCTCATGGGCTGTTAAGCCTGCCTGTGAGAAAGATTaGAGCTTCTTGTTAGGGAAT +
Preference number: 5 (lower is better)
Translates to: FKWNRYVHVYMTSWAVKPACEKD*SFLLGN
Trigger: ATTCCCTAACAAGAAGCTCAAATCTTTCTCACAGGC...AGGCTTAACAGCCCATGAGGTCATATACACATGAACGTATCTATTCCATTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357613.8
ENST00000561878.2
CDS-3UTR CAA 90 bp GCCAAAAGACTTGTTTTGGTTGAGAACAATAGGAGTCCACATAAGTCTTCAATTAAAGACTTGTTTTGGTaGAGAACAATAGGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: AKRLVLVENNRSPHKSSIKDLFW*RTIGVH
Trigger: GTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTT...AATTGAAGACTTATGTGGACTCCTATTGTTCTCAACCAAAACAAGTCTTTTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS GCA 72 bp CCCACCCGCGGCACAACCTTCAGGCTCAGGATCTGCTaGAGGAGCCCGGCCGACCCGCCGCTGCCGCCGCTC +
Preference number: 6 (lower is better)
Translates to: PTRGTTFRLRIC*RSPADPPLPPL
Trigger: GAGCGGCGGCAGCGGCGGGTCGGCCGGGCTCCTGCAGCAGATCCTGAGCCTGAAGGTTGTGCCGCGGGTGGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569276.1
CDS GCA 72 bp ATTCACCACAGAGAAATGAGGGACGAGCGCCCGAAGTaGGGTAGCGGCCGGCGCCGACTCACCCTCGCCGCC +
Preference number: 6 (lower is better)
Translates to: IHHREMRDERPK*GSGRRRLTLAA
Trigger: GGCGGCGAGGGTGAGTCGGCGCCGGCCGCTACCGCACTTCGGGCGCTCGTCCCTCATTTCTCTGTGGTGAAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
CDS CAA 72 bp GAGCAGAGGGAAGTAGAGTTGGGGCACAGGGTCCCGTaGCCCACCCGCGGCACAACCTTCAGGCTCAGGATC +
Preference number: 6 (lower is better)
Translates to: EQREVELGHRVP*PTRGTTFRLRI
Trigger: GATCCTGAGCCTGAAGGTTGTGCCGCGGGTGGGCAACGGGACCCTGTGCCCCAACTCTACTTCCCTCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000568559.1
ENST00000569276.1
CDS GCA 72 bp ACCATACCACATCGTGTTGCCCAGGCTGGTCTTGAATaGCTCGGCTCAAACAATCCGCCCAACTTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: TIPHRVAQAGLE*LGSNNPPNLAS
Trigger: GGAGGCCAAGTTGGGCGGATTGTTTGAGCCGAGGCATTCAAGACCAGCCTGGGCAACACGATGTGGTATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567796.1
CDS CAA 90 bp AGAGAAGACACCAGTGCCCACAGGAATACACCATACCACATCGTGTaGCCCAGGCTGGTCTTGAATGCCTCGGCTCAAACAATCCGCCCA +
Preference number: 6 (lower is better)
Translates to: REDTSAHRNTPYHIV*PRLVLNASAQTIRP
Trigger: TGGGCGGATTGTTTGAGCCGAGGCATTCAAGACCAGCCTGGGCAACACGATGTGGTATGGTGTATTCCTGTGGGCACTGGTGTCTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567796.1
CDS CAA 72 bp ACCAGTGCCCACAGGAATACACCATACCACATCGTGTaGCCCAGGCTGGTCTTGAATGCCTCGGCTCAAACA +
Preference number: 6 (lower is better)
Translates to: TSAHRNTPYHIV*PRLVLNASAQT
Trigger: TGTTTGAGCCGAGGCATTCAAGACCAGCCTGGGCAACACGATGTGGTATGGTGTATTCCTGTGGGCACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567796.1
CDS CCA 72 bp AAATGTCTGTCCAGTGCCCAGTGTGAGGGCTTCAAATaGTATCATTTCCTTCCCTGCTGCTCGGTAAACTCC +
Preference number: 6 (lower is better)
Translates to: KCLSSAQCEGFK*YHFLPCCSVNS
Trigger: GGAGTTTACCGAGCAGCAGGGAAGGAAATGATACCATTTGAAGCCCTCACACTGGGCACTGGACAGACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357613.8
ENST00000561878.2
ENST00000566980.1
ENST00000567796.1
ENST00000568559.1
ENST00000569540.5
CDS GCA 72 bp CAGTGTGAGGGCTTCAAATGGTATCATTTCCTTCCCTaGTGCTCGGTAAACTCCAGCAATAGCTGCACCATA +
Preference number: 6 (lower is better)
Translates to: QCEGFKWYHFLP*CSVNSSNSCTI
Trigger: TATGGTGCAGCTATTGCTGGAGTTTACCGAGCAGCAGGGAAGGAAATGATACCATTTGAAGCCCTCACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357613.8
ENST00000566980.1
ENST00000568559.1
CDS GCA 72 bp CAGTGTGAGGGCTTCAAATGGTATCATTTCCTTCCCTaGTGCTCGGTAAACTCCAGCAATAGCTGCACTTGT +
Preference number: 6 (lower is better)
Translates to: QCEGFKWYHFLP*CSVNSSNSCTC
Trigger: ACAAGTGCAGCTATTGCTGGAGTTTACCGAGCAGCAGGGAAGGAAATGATACCATTTGAAGCCCTCACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561878.2
ENST00000567796.1
ENST00000569540.5
CDS CCA 72 bp AGCAATAGCTGCACTTGTCAAGATTCCAGCAGTAATTaGTCCCACGATGCCCATCAACAGGATGCTTACAGA +
Preference number: 6 (lower is better)
Translates to: SNSCTCQDSSSN*SHDAHQQDAYR
Trigger: TCTGTAAGCATCCTGTTGATGGGCATCGTGGGACCAATTACTGCTGGAATCTTGACAAGTGCAGCTATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561878.2
ENST00000567796.1
ENST00000569540.5