RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM169 (Homo sapiens)

Ensembl gene IDs: ENSG00000163449

Ensembl transcript IDs: ENST00000295658.8, ENST00000406027.2, ENST00000433112.5, ENST00000437356.7, ENST00000454545.5, ENST00000455479.5

Found 487 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTCCATTGGGTGAACTGCTTTGGCACAATTGCTTGTCTGCTCCATaGCCTCCTGGAACCCTCAAGATGGTAAAACTGATCAGTATGGAC +
Preference number: 1 (lower is better)
Translates to: CPLGELLWHNCLSAP*PPGTLKMVKLISMD
Trigger: GTCCATACTGATCAGTTTTACCATCTTGAGGGTTCCAGGAGGGCATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR GCA 90 bp GATTTTAGGGCAGGGAATCAAAAAGAGTTTGTCCATTGGGTGAACTaGTTTGGCACAATTGCTTGTCTGCTCCATGCCCTCCTGGAACCC +
Preference number: 1 (lower is better)
Translates to: DFRAGNQKEFVHWVN*FGTIACLLHALLEP
Trigger: GGGTTCCAGGAGGGCATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTTTTGATTCCCTGCCCTAAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR GCA 90 bp AAGAAGCCTGGGACCTGGATTACTTCACAGGGTCCCAGGATGGTCTaGCTCCAGACTTCTTCTGCACAAGAAAGAAATACACTTCTATCT +
Preference number: 1 (lower is better)
Translates to: KKPGTWITSQGPRMV*LQTSSAQERNTLLS
Trigger: AGATAGAAGTGTATTTCTTTCTTGTGCAGAAGAAGTCTGGAGGCAGACCATCCTGGGACCCTGTGAAGTAATCCAGGTCCCAGGCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR GCA 90 bp GGACTTCTGGGAAGTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTaGCCTTTCCTCTATTTTATCAGAAACATGGATGTGATGGCTGAA +
Preference number: 1 (lower is better)
Translates to: GLLGSLLEQEGCVLL*PFLYFIRNMDVMAE
Trigger: TTCAGCCATCACATCCATGTTTCTGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGACTTCCCAGAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR TCA 90 bp CTCAGCACAGCAAAGATCATGTCTGTGGTTAAACTCAGAAAGGTCTaGGGGAGTAAAGCTCTGAGTGAGGTTTTGCCAAACAACAGAAGG +
Preference number: 1 (lower is better)
Translates to: LSTAKIMSVVKLRKV*GSKALSEVLPNNRR
Trigger: CCTTCTGTTGTTTGGCAAAACCTCACTCAGAGCTTTACTCCCTCAGACCTTTCTGAGTTTAACCACAGACATGATCTTTGCTGTGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR GCA 90 bp GAATCAAAAAGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTaGTTGTCTGCTCCATGCCCTCCTGGAACCCTCAAGATGGTAAAA +
Preference number: 1 (lower is better)
Translates to: ESKRVCPLGELLWHN*LSAPCPPGTLKMVK
Trigger: TTTTACCATCTTGAGGGTTCCAGGAGGGCATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTTTTGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR TCA 90 bp TCTCTGCCCTTTCCTCTATTTTATCAGAAACATGGATGTGATGGCTaGAGATGTAATCAGCACTGGGATGTTGGGGATAAGGGTGAGAAG +
Preference number: 1 (lower is better)
Translates to: SLPFPLFYQKHGCDG*RCNQHWDVGDKGEK
Trigger: CTTCTCACCCTTATCCCCAACATCCCAGTGCTGATTACATCTTCAGCCATCACATCCATGTTTCTGATAAAATAGAGGAAAGGGCAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR CCA 90 bp TCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTATCTTGGTaGATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATTTA +
Preference number: 1 (lower is better)
Translates to: SSFLNVSLHPCLLSW*IWLPRGSLFSLTHL
Trigger: TAAATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR CCA 90 bp TTCCTAAATGTCTCACTCCATCCCTGTCTATTATCTTGGTGGATTTaGTTACCCCGAGGTTCTTTATTCTCCCTGACACATTTAGTCACA +
Preference number: 1 (lower is better)
Translates to: FLNVSLHPCLLSWWI*LPRGSLFSLTHLVT
Trigger: TGTGACTAAATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGTGAGACATTTAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR TCA 90 bp CATTCTTCCTTTTTCTTGCCAATTAGCGTGAACCCAGTATTTAGCTaGGAATATAGCTACCCAGCCAAACAACTACATTTCCAGCCTCTT +
Preference number: 1 (lower is better)
Translates to: HSSFFLPISVNPVFS*EYSYPAKQLHFQPL
Trigger: AAGAGGCTGGAAATGTAGTTGTTTGGCTGGGTAGCTATATTCTCAGCTAAATACTGGGTTCACGCTAATTGGCAAGAAAAAGGAAGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR TCA 90 bp AACAAAACCCAAATAACCATTCTTCCTTTTTCTTGCCAATTAGCGTaGACCCAGTATTTAGCTGAGAATATAGCTACCCAGCCAAACAAC +
Preference number: 1 (lower is better)
Translates to: NKTQITILPFSCQLA*TQYLAENIATQPNN
Trigger: GTTGTTTGGCTGGGTAGCTATATTCTCAGCTAAATACTGGGTTCACGCTAATTGGCAAGAAAAAGGAAGAATGGTTATTTGGGTTTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR TCA 90 bp GAGAGAGTTCCTCTGAAGGTGGAGCTCAGCACCATACATCAGGCAAATGTCCTGTCTGGGAAGTCTCCTTaGACAGGAAGGGTGTGTGCT +
Preference number: 2 (lower is better)
Translates to: ERVPLKVELSTIHQANVLSGKSP*TGRVCA
Trigger: AGCACACACCCTTCCTGTTCAAGGAGACTTCCCAGA...CAGGACATTTGCCTGATGTATGGTGCTGAGCTCCACCTTCAGAGGAACTCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CCA 90 bp GAGAGAGTTCCTCTGAAGGTGGAGCTCAGCACCATACATCAGGCAAATGTCCTGAAGAAGCCTGGGACCTaGATTACTTCACAGGGTCCC +
Preference number: 2 (lower is better)
Translates to: ERVPLKVELSTIHQANVLKKPGT*ITSQGP
Trigger: GGGACCCTGTGAAGTAATCCAGGTCCCAGGCTTCTT...CAGGACATTTGCCTGATGTATGGTGCTGAGCTCCACCTTCAGAGGAACTCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR GCA 90 bp ATAAGAAGAATCGAGTGGGACTTCTGGGAAGTCTCCTTGAACAGGAAGGGTGTGTGCTTGTCTGCTCCATaGCCTCCTGGAACCCTCAAG +
Preference number: 2 (lower is better)
Translates to: IRRIEWDFWEVSLNRKGVCLSAP*PPGTLK
Trigger: CTTGAGGGTTCCAGGAGGGCATGGAGCAGACAAGCA...CACACCCTTCCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CCA 90 bp GAGAGAGTTCCTCTGAAGGTGGAGCTCAGCACCATACATCAGGCAAATGTCCTGATCGAGTGGGACTTCTaGGAAGTCTCCTTGAACAGG +
Preference number: 2 (lower is better)
Translates to: ERVPLKVELSTIHQANVLIEWDF*EVSLNR
Trigger: CCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGAT...CAGGACATTTGCCTGATGTATGGTGCTGAGCTCCACCTTCAGAGGAACTCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR TCA 90 bp GAGAGAGTTCCTCTGAAGGTGGAGCTCAGCACCATACATCAGGCAAATGTCCTGGATCAGTATGGACTCTaGTTTCCCAGAAGAACTGCG +
Preference number: 2 (lower is better)
Translates to: ERVPLKVELSTIHQANVLDQYGL*FPRRTA
Trigger: CGCAGTTCTTCTGGGAAATCAGAGTCCATACTGATC...CAGGACATTTGCCTGATGTATGGTGCTGAGCTCCACCTTCAGAGGAACTCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR TCA 90 bp CAGGCACCAGTAACACTTCCAGGCTCCCAAAACGACACACAGCAGAGTTCCATTAGTTTGTCCATTGGGTaGACTGCTTTGGCACAATTG +
Preference number: 2 (lower is better)
Translates to: QAPVTLPGSQNDTQQSSISLSIG*TALAQL
Trigger: CAATTGTGCCAAAGCAGTTCACCCAATGGACAAACT...AATGGAACTCTGCTGTGTGTCGTTTTGGGAGCCTGGAAGTGTTACTGGTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CCA 90 bp AGAAACATGGATGTGATGGCTGAAGATGTAATCAGCACTGGGATGTTGGGGATACACAGGGTCCCAGGATaGTCTGCCTCCAGACTTCTT +
Preference number: 2 (lower is better)
Translates to: RNMDVMAEDVISTGMLGIHRVPG*SASRLL
Trigger: AAGAAGTCTGGAGGCAGACCATCCTGGGACCCTGTG...TATCCCCAACATCCCAGTGCTGATTACATCTTCAGCCATCACATCCATGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR GCA 90 bp ACACAAATCTTTACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCTGCTTGTCTGCTCCATaGCCTCCTGGAACCCTCAAG +
Preference number: 2 (lower is better)
Translates to: TQIFTFCYTVVVQLPKCLCLSAP*PPGTLK
Trigger: CTTGAGGGTTCCAGGAGGGCATGGAGCAGACAAGCA...GAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGTAAAGATTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR GCA 90 bp ACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGGTCCATTGGGTGAACTaGTTTGGCACAATTGCTTGT +
Preference number: 2 (lower is better)
Translates to: TFCYTVVVQLPKCLTPSLVHWVN*FGTIAC
Trigger: ACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGAC...CAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CCA 90 bp GGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCAGAAACATGGATGTAAGAAGCCTGGGACCTaGATTACTTCACAGGGTCCC +
Preference number: 2 (lower is better)
Translates to: GRVCASLPFPLFYQKHGCKKPGT*ITSQGP
Trigger: GGGACCCTGTGAAGTAATCCAGGTCCCAGGCTTCTT...ACATCCATGTTTCTGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR CAA 90 bp TCAAAAAGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTGCTaGTCTGCTCCATGCCCTCCTGGAACCCTCAAGATGGTAAAACTG +
Preference number: 2 (lower is better)
Translates to: SKRVCPLGELLWHNC*SAPCPPGTLKMVKL
Trigger: CAGTTTTACCATCTTGAGGGTTCCAGGAGGGCATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR TCA 90 bp CAGGTAGACACAAGTTTCTCAGCACAGCAAAGATCATGTCTGTGGTTAAACTCATCTGGGAAGTCTCCTTaGACAGGAAGGGTGTGTGCT +
Preference number: 2 (lower is better)
Translates to: QVDTSFSAQQRSCLWLNSSGKSP*TGRVCA
Trigger: AGCACACACCCTTCCTGTTCAAGGAGACTTCCCAGA...TGAGTTTAACCACAGACATGATCTTTGCTGTGCTGAGAAACTTGTGTCTACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR GCA 90 bp CTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCTGCTTGTCTGCTCCATaGCCTCCTGGAACCCTCAAG +
Preference number: 2 (lower is better)
Translates to: LHHQDKELCYYYKLYSPVCLSAP*PPGTLK
Trigger: CTTGAGGGTTCCAGGAGGGCATGGAGCAGACAAGCA...GACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR CAA 90 bp GTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTATCTaGGTGGATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACA +
Preference number: 2 (lower is better)
Translates to: VVQLPKCLTPSLSII*VDLVTPRFFILPDT
Trigger: TGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR CAA 90 bp CTGAGTGAGGTTTTGCCAAACAACAGAAGGCTAAATCTGGCTTCTTaGTACTTAGGGCTACTGATCGCTGTTGGAGGAAACTTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: LSEVLPNNRRLNLAS*YLGLLIAVGGNFGR
Trigger: TCTGCCAAAGTTTCCTCCAACAGCGATCAGTAGCCCTAAGTACAAAGAAGCCAGATTTAGCCTTCTGTTGTTTGGCAAAACCTCACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR TCA 90 bp AAAGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTGCTTGTCTGCTCCATGATCAGTATGGACTCTaGTTTCCCAGAAGAACTGCG +
Preference number: 2 (lower is better)
Translates to: KEFVHWVNCFGTIACLLHDQYGL*FPRRTA
Trigger: CGCAGTTCTTCTGGGAAATCAGAGTCCATACTGATC...ATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR GCA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTAACAGGAAGGGTGTGTaGTTCTCTGCCCTTTCCTCT +
Preference number: 2 (lower is better)
Translates to: RPTSTTRTKSYATIINCTNRKGV*FSALSS
Trigger: AGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTT...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CCA 90 bp ATAAGAAGAATCGAGTGGGACTTCTGGGAAGTCTCCTTGAACAGGAAGGGTGTGTGTCTATTATCTTGGTaGATTTGGTTACCCCGAGGT +
Preference number: 2 (lower is better)
Translates to: IRRIEWDFWEVSLNRKGVCLLSW*IWLPRG
Trigger: ACCTCGGGGTAACCAAATCCACCAAGATAATAGACA...CACACCCTTCCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR GCA 90 bp ATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAAATTCTGCTTGTCTGCTCCATaGCCTCCTGGAACCCTCAAG +
Preference number: 2 (lower is better)
Translates to: MNKKRAPAILIRTQISKFCLSAP*PPGTLK
Trigger: CTTGAGGGTTCCAGGAGGGCATGGAGCAGACAAGCA...GAATTTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR GCA 90 bp TCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCCCTGCTTTGGCACAATTaGTTGTCTGCTCCATGCCCT +
Preference number: 2 (lower is better)
Translates to: STTRTKSYATIINCTLLSLLWHN*LSAPCP
Trigger: AGGGCATGGAGCAGACAAGCAATTGTGCCAAAGCAG...GGACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR GCA 90 bp GAAGTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTACAAATCTTTACCTTCTaGTACACTGTGGTAGTCCAG +
Preference number: 2 (lower is better)
Translates to: EVSLNRKGVCFSALSSILQIFTF*YTVVVQ
Trigger: CTGGACTACCACAGTGTAGCAGAAGGTAAAGATTTG...TAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CCA 90 bp AAACAAAACCCAAATAACCATTCTTCCTTTTTCTTGCCAATTAGCGTGAACCCACACAGGGTCCCAGGATaGTCTGCCTCCAGACTTCTT +
Preference number: 2 (lower is better)
Translates to: KQNPNNHSSFFLPISVNPHRVPG*SASRLL
Trigger: AAGAAGTCTGGAGGCAGACCATCCTGGGACCCTGTG...TGGGTTCACGCTAATTGGCAAGAAAAAGGAAGAATGGTTATTTGGGTTTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CCA 90 bp AGACATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAATGTAATCCCAGCTACTaGGGAGGCCAAGGCACAAGA +
Preference number: 2 (lower is better)
Translates to: RHEQEKSTSYSYKDPNLQCNPSY*GGQGTR
Trigger: TCTTGTGCCTTGGCCTCCCCAGTAGCTGGGATTACA...TTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CCA 90 bp CAGGTAGACACAAGTTTCTCAGCACAGCAAAGATCATGTCTGTGGTTAAACTCAGCTACTGATCGCTGTTaGAGGAAACTTTGGCAGATG +
Preference number: 2 (lower is better)
Translates to: QVDTSFSAQQRSCLWLNSATDRC*RKLWQM
Trigger: CATCTGCCAAAGTTTCCTCCAACAGCGATCAGTAGC...TGAGTTTAACCACAGACATGATCTTTGCTGTGCTGAGAAACTTGTGTCTACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR CAA 90 bp CTTCCTAAATGTCTCACTCCATCCCTGTCTATTATCTTGGTGGATTaGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATTTAGTCAC +
Preference number: 2 (lower is better)
Translates to: LPKCLTPSLSIILVD*VTPRFFILPDTFSH
Trigger: GTGACTAAATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGTGAGACATTTAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR TCA 90 bp TCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGCTGGAATTTTAAGATaGTATATAGGCTACTGGGGC +
Preference number: 2 (lower is better)
Translates to: SLSIILVDLVTPRFFILPAGILR*YIGYWG
Trigger: GCCCCAGTAGCCTATATATCATCTTAAAATTCCAGC...AGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR TCA 90 bp ACACAAATCTTTACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCAGTTTGTCCATTGGGTaGACTGCTTTGGCACAATTG +
Preference number: 2 (lower is better)
Translates to: TQIFTFCYTVVVQLPKCLSLSIG*TALAQL
Trigger: CAATTGTGCCAAAGCAGTTCACCCAATGGACAAACT...GAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGTAAAGATTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR TCA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTGTGAGGCAAAGATTCTaGCTTGCCTACCAAGATAAC +
Preference number: 2 (lower is better)
Translates to: RPTSTTRTKSYATIINCTVRQRF*LAYQDN
Trigger: GTTATCTTGGTAGGCAAGTCAGAATCTTTGCCTCAC...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR GCA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTGTCCATTGGGTGAACTaGTTTGGCACAATTGCTTGT +
Preference number: 2 (lower is better)
Translates to: RPTSTTRTKSYATIINCTVHWVN*FGTIAC
Trigger: ACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGAC...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CCA 90 bp AGAAACATGGATGTGATGGCTGAAGATGTAATCAGCACTGGGATGTTGGGGATAAAAGAGTTTGTCCATTaGGTGAACTGCTTTGGCACA +
Preference number: 2 (lower is better)
Translates to: RNMDVMAEDVISTGMLGIKEFVH*VNCFGT
Trigger: TGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT...TATCCCCAACATCCCAGTGCTGATTACATCTTCAGCCATCACATCCATGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CCA 90 bp ATCTTTACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCAAAAGAGTTTGTCCATTaGGTGAACTGCTTTGGCACA +
Preference number: 2 (lower is better)
Translates to: IFTFCYTVVVQLPKCLTPKEFVH*VNCFGT
Trigger: TGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT...TGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGTAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CCA 90 bp GAAGTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATTATCTTGGTGGATTTaGTTACCCCGAGGTTCTTTA +
Preference number: 2 (lower is better)
Translates to: EVSLNRKGVCFSALSSILLSWWI*LPRGSL
Trigger: TAAAGAACCTCGGGGTAACCAAATCCACCAAGATAA...TAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CCA 90 bp GGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCAGAAACATGGATGTTGTCTATTATCTTGGTaGATTTGGTTACCCCGAGGT +
Preference number: 2 (lower is better)
Translates to: GRVCASLPFPLFYQKHGCCLLSW*IWLPRG
Trigger: ACCTCGGGGTAACCAAATCCACCAAGATAATAGACA...ACATCCATGTTTCTGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CCA 90 bp AGACATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAAATCGAGTGGGACTTCTaGGAAGTCTCCTTGAACAGG +
Preference number: 2 (lower is better)
Translates to: RHEQEKSTSYSYKDPNLQIEWDF*EVSLNR
Trigger: CCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGAT...TTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR TCA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTGCTGGAATTTTAAGATaGTATATAGGCTACTGGGGC +
Preference number: 2 (lower is better)
Translates to: RPTSTTRTKSYATIINCTAGILR*YIGYWG
Trigger: GCCCCAGTAGCCTATATATCATCTTAAAATTCCAGC...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR TCA 90 bp CTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCAACCCAGTATTTAGCTaGGAATATAGCTACCCAGCC +
Preference number: 2 (lower is better)
Translates to: LHHQDKELCYYYKLYSPVNPVFS*EYSYPA
Trigger: GGCTGGGTAGCTATATTCTCAGCTAAATACTGGGTT...GACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR TCA 90 bp CTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCGTGAGGCAAAGATTCTaGCTTGCCTACCAAGATAAC +
Preference number: 2 (lower is better)
Translates to: LHHQDKELCYYYKLYSPVVRQRF*LAYQDN
Trigger: GTTATCTTGGTAGGCAAGTCAGAATCTTTGCCTCAC...GACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR GCA 90 bp CAGGTAGACACAAGTTTCTCAGCACAGCAAAGATCATGTCTGTGGTTAAACTCACAAATCTTTACCTTCTaGTACACTGTGGTAGTCCAG +
Preference number: 2 (lower is better)
Translates to: QVDTSFSAQQRSCLWLNSQIFTF*YTVVVQ
Trigger: CTGGACTACCACAGTGTAGCAGAAGGTAAAGATTTG...TGAGTTTAACCACAGACATGATCTTTGCTGTGCTGAGAAACTTGTGTCTACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CCA 90 bp CAGGTAGACACAAGTTTCTCAGCACAGCAAAGATCATGTCTGTGGTTAAACTCAAAAGAGTTTGTCCATTaGGTGAACTGCTTTGGCACA +
Preference number: 2 (lower is better)
Translates to: QVDTSFSAQQRSCLWLNSKEFVH*VNCFGT
Trigger: TGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT...TGAGTTTAACCACAGACATGATCTTTGCTGTGCTGAGAAACTTGTGTCTACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CCA 90 bp CTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCCCCTGTCTATTATCTTaGTGGATTTGGTTACCCCGA +
Preference number: 2 (lower is better)
Translates to: LHHQDKELCYYYKLYSPVPCLLS*WIWLPR
Trigger: TCGGGGTAACCAAATCCACCAAGATAATAGACAGGG...GACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CCA 90 bp AAACAAAACCCAAATAACCATTCTTCCTTTTTCTTGCCAATTAGCGTGAACCCAATCGAGTGGGACTTCTaGGAAGTCTCCTTGAACAGG +
Preference number: 2 (lower is better)
Translates to: KQNPNNHSSFFLPISVNPIEWDF*EVSLNR
Trigger: CCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGAT...TGGGTTCACGCTAATTGGCAAGAAAAAGGAAGAATGGTTATTTGGGTTTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR CAA 90 bp TCCTCTGGTTTGATTCATCGCAGCAGTTCTCTCAACAGCTTTGTTTaGAGACATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGAC +
Preference number: 2 (lower is better)
Translates to: SSGLIHRSSSLNSFV*RHEQEKSTSYSYKD
Trigger: GTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCATGTCTCAAAACAAAGCTGTTGAGAGAACTGCTGCGATGAATCAAACCAGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR TCA 90 bp CTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCGCTGGAATTTTAAGATaGTATATAGGCTACTGGGGC +
Preference number: 2 (lower is better)
Translates to: LHHQDKELCYYYKLYSPVAGILR*YIGYWG
Trigger: GCCCCAGTAGCCTATATATCATCTTAAAATTCCAGC...GACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR TCA 90 bp AGACATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAAAGTTTGTCCATTGGGTaGACTGCTTTGGCACAATTG +
Preference number: 2 (lower is better)
Translates to: RHEQEKSTSYSYKDPNLQSLSIG*TALAQL
Trigger: CAATTGTGCCAAAGCAGTTCACCCAATGGACAAACT...TTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR TCA 90 bp AGACATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAAAAACTCAGAAAGGTCTaGGGGAGTAAAGCTCTGAGT +
Preference number: 2 (lower is better)
Translates to: RHEQEKSTSYSYKDPNLQKLRKV*GSKALS
Trigger: ACTCAGAGCTTTACTCCCTCAGACCTTTCTGAGTTT...TTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCATGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR GCA 90 bp CAGGTAGACACAAGTTTCTCAGCACAGCAAAGATCATGTCTGTGGTTAAACTCACCTCCAGACTTCTTCTaGACAAGAAAGAAATACACT +
Preference number: 2 (lower is better)
Translates to: QVDTSFSAQQRSCLWLNSPPDFF*TRKKYT
Trigger: AGTGTATTTCTTTCTTGTGCAGAAGAAGTCTGGAGG...TGAGTTTAACCACAGACATGATCTTTGCTGTGCTGAGAAACTTGTGTCTACCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR GCA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCCTCCAGACTTCTTCTaGACAAGAAAGAAATACACT +
Preference number: 2 (lower is better)
Translates to: RPTSTTRTKSYATIINCTPPDFF*TRKKYT
Trigger: AGTGTATTTCTTTCTTGTGCAGAAGAAGTCTGGAGG...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR GCA 90 bp AGACATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAAGGGTGTGTGCTTCTCTaGCCTTTCCTCTATTTTATC +
Preference number: 2 (lower is better)
Translates to: RHEQEKSTSYSYKDPNLQGCVLL*PFLYFI
Trigger: GATAAAATAGAGGAAAGGGCAGAGAAGCACACACCC...TTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CCA 90 bp TCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCCTGTCTATTATCTTGGTaGATTTGGTTACCCCGAGGT +
Preference number: 2 (lower is better)
Translates to: STTRTKSYATIINCTLLSCLLSW*IWLPRG
Trigger: ACCTCGGGGTAACCAAATCCACCAAGATAATAGACA...GGACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CCA 90 bp AGACATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAATGTTGGAGGAAACTTTaGCAGATGCAATTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: RHEQEKSTSYSYKDPNLQCWRKL*QMQFLP
Trigger: AGGGAGGAATTGCATCTGCCAAAGTTTCCTCCAACA...TTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
3UTR CAA 90 bp TCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATaGTACTCTCCTGTCCACTATTCCTTTCCAAAAACAAATCACATG +
Preference number: 2 (lower is better)
Translates to: SHLHHQDKELCYYYK*YSPVHYSFPKTNHM
Trigger: CATGTGATTTGTTTTTGGAAAGGAATAGTGGACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR GCA 90 bp AAACAAAACCCAAATAACCATTCTTCCTTTTTCTTGCCAATTAGCGTGAACCCAGTCCATTGGGTGAACTaGTTTGGCACAATTGCTTGT +
Preference number: 2 (lower is better)
Translates to: KQNPNNHSSFFLPISVNPVHWVN*FGTIAC
Trigger: ACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGAC...TGGGTTCACGCTAATTGGCAAGAAAAAGGAAGAATGGTTATTTGGGTTTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CCA 90 bp AAACAAAACCCAAATAACCATTCTTCCTTTTTCTTGCCAATTAGCGTGAACCCAATAAGAAGAATCGAGTaGGACTTCTGGGAAGTCTCC +
Preference number: 2 (lower is better)
Translates to: KQNPNNHSSFFLPISVNPIRRIE*DFWEVS
Trigger: GGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT...TGGGTTCACGCTAATTGGCAAGAAAAAGGAAGAATGGTTATTTGGGTTTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR TCA 90 bp TTACAGAAGCTTAATTGCAAAGTACGTGAGGTGCTAATATCGATGTATAGCATAGTGAGGCAAAGATTCTaGCTTGCCTACCAAGATAAC +
Preference number: 2 (lower is better)
Translates to: LQKLNCKVREVLISMYSIVRQRF*LAYQDN
Trigger: GTTATCTTGGTAGGCAAGTCAGAATCTTTGCCTCAC...TATGCTATACATCGATATTAGCACCTCACGTACTTTGCAATTAAGCTTCTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR TCA 90 bp TCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCCGCAGTTTGGGGGTTCTaGATGTATTTAAATGATCAT +
Preference number: 2 (lower is better)
Translates to: STTRTKSYATIINCTLLSAVWGF*MYLNDH
Trigger: ATGATCATTTAAATACATTCAGAACCCCCAAACTGC...GGACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR GCA 90 bp TTACAGAAGCTTAATTGCAAAGTACGTGAGGTGCTAATATCGATGTATAGCATAGTCCATTGGGTGAACTaGTTTGGCACAATTGCTTGT +
Preference number: 2 (lower is better)
Translates to: LQKLNCKVREVLISMYSIVHWVN*FGTIAC
Trigger: ACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGAC...TATGCTATACATCGATATTAGCACCTCACGTACTTTGCAATTAAGCTTCTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR GCA 90 bp TCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCCTTACAGAAGCTTAATTaGAAAGTACGTGAGGTGCTA +
Preference number: 2 (lower is better)
Translates to: STTRTKSYATIINCTLLSLQKLN*KVREVL
Trigger: TAGCACCTCACGTACTTTGCAATTAAGCTTCTGTAA...GGACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CCA 90 bp ATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAAATTCAAAGAGTTTGTCCATTaGGTGAACTGCTTTGGCACA +
Preference number: 2 (lower is better)
Translates to: MNKKRAPAILIRTQISKFKEFVH*VNCFGT
Trigger: TGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT...GAATTTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CCA 90 bp ATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAAATTCGAAATAGAAGAAGCCTaGGACCTGGATTACTTCACA +
Preference number: 2 (lower is better)
Translates to: MNKKRAPAILIRTQISKFEIEEA*DLDYFT
Trigger: TGTGAAGTAATCCAGGTCCCAGGCTTCTTCTATTTC...GAATTTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CCA 90 bp TTACAGAAGCTTAATTGCAAAGTACGTGAGGTGCTAATATCGATGTATAGCATAATAAGAAGAATCGAGTaGGACTTCTGGGAAGTCTCC +
Preference number: 2 (lower is better)
Translates to: LQKLNCKVREVLISMYSIIRRIE*DFWEVS
Trigger: GGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT...TATGCTATACATCGATATTAGCACCTCACGTACTTTGCAATTAAGCTTCTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR GCA 90 bp TTACAGAAGCTTAATTGCAAAGTACGTGAGGTGCTAATATCGATGTATAGCATACCTCCAGACTTCTTCTaGACAAGAAAGAAATACACT +
Preference number: 2 (lower is better)
Translates to: LQKLNCKVREVLISMYSIPPDFF*TRKKYT
Trigger: AGTGTATTTCTTTCTTGTGCAGAAGAAGTCTGGAGG...TATGCTATACATCGATATTAGCACCTCACGTACTTTGCAATTAAGCTTCTGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CCA 90 bp ATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAAATTCCAAAGATCATGTCTGTaGTTAAACTCAGAAAGGTCT +
Preference number: 2 (lower is better)
Translates to: MNKKRAPAILIRTQISKFQRSCL*LNSERS
Trigger: AGACCTTTCTGAGTTTAACCACAGACATGATCTTTG...GAATTTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
3UTR CCA 72 bp AGGTGGAGCTCAGCACCATACATCAGGCAAATGTCCTaGGCTCTCTGTGGGGAGCATGACAAACTCCTCTGG +
Preference number: 3 (lower is better)
Translates to: RWSSAPYIRQMS*ALCGEHDKLLW
Trigger: CCAGAGGAGTTTGTCATGCTCCCCACAGAGAGCCCAGGACATTTGCCTGATGTATGGTGCTGAGCTCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
3UTR CCA 72 bp AGCCTGGGACCTGGATTACTTCACAGGGTCCCAGGATaGTCTGCCTCCAGACTTCTTCTGCACAAGAAAGAA +
Preference number: 3 (lower is better)
Translates to: SLGPGLLHRVPG*SASRLLLHKKE
Trigger: TTCTTTCTTGTGCAGAAGAAGTCTGGAGGCAGACCATCCTGGGACCCTGTGAAGTAATCCAGGTCCCAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR GCA 72 bp AGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTaGTTGTCTGCTCCATGCCCTCCTGGAACCCTCAAG +
Preference number: 3 (lower is better)
Translates to: RVCPLGELLWHN*LSAPCPPGTLK
Trigger: CTTGAGGGTTCCAGGAGGGCATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR GCA 72 bp GGTGAACTGCTTTGGCACAATTGCTTGTCTGCTCCATaGCCTCCTGGAACCCTCAAGATGGTAAAACTGATC +
Preference number: 3 (lower is better)
Translates to: GELLWHNCLSAP*PPGTLKMVKLI
Trigger: GATCAGTTTTACCATCTTGAGGGTTCCAGGAGGGCATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR GCA 72 bp GGGACCTGGATTACTTCACAGGGTCCCAGGATGGTCTaGCTCCAGACTTCTTCTGCACAAGAAAGAAATACA +
Preference number: 3 (lower is better)
Translates to: GTWITSQGPRMV*LQTSSAQERNT
Trigger: TGTATTTCTTTCTTGTGCAGAAGAAGTCTGGAGGCAGACCATCCTGGGACCCTGTGAAGTAATCCAGGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CAA 90 bp GAGAGAGTTCCTCTGAAGGTGGAGCTCAGCACCATACATCAGGCAAATGTCCTGAAAAGAGTTTGTCCATaGGGTGAACTGCTTTGGCAC +
Preference number: 3 (lower is better)
Translates to: ERVPLKVELSTIHQANVLKRVCP*GELLWH
Trigger: GTGCCAAAGCAGTTCACCCAATGGACAAACTCTTTT...CAGGACATTTGCCTGATGTATGGTGCTGAGCTCCACCTTCAGAGGAACTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
3UTR GCA 72 bp GCAGGGAATCAAAAAGAGTTTGTCCATTGGGTGAACTaGTTTGGCACAATTGCTTGTCTGCTCCATGCCCTC +
Preference number: 3 (lower is better)
Translates to: AGNQKEFVHWVN*FGTIACLLHAL
Trigger: GAGGGCATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTTTTGATTCCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR CCA 72 bp TCTGGCTTCTTTGTACTTAGGGCTACTGATCGCTGTTaGAGGAAACTTTGGCAGATGCAATTCCTCCCTTCC +
Preference number: 3 (lower is better)
Translates to: SGFFVLRATDRC*RKLWQMQFLPS
Trigger: GGAAGGGAGGAATTGCATCTGCCAAAGTTTCCTCCAACAGCGATCAGTAGCCCTAAGTACAAAGAAGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CAA 90 bp GGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCAGAAACATGGATGTCTTTGGCACAATTGCTaGTCTGCTCCATGCCCTCCT +
Preference number: 3 (lower is better)
Translates to: GRVCASLPFPLFYQKHGCLWHNC*SAPCPP
Trigger: AGGAGGGCATGGAGCAGACAAGCAATTGTGCCAAAG...ACATCCATGTTTCTGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CAA 90 bp ACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGAAAAGAGTTTGTCCATaGGGTGAACTGCTTTGGCAC +
Preference number: 3 (lower is better)
Translates to: TFCYTVVVQLPKCLTPSLKRVCP*GELLWH
Trigger: GTGCCAAAGCAGTTCACCCAATGGACAAACTCTTTT...CAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CAA 90 bp ACTCCATCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCTTTGGCACAATTGCTaGTCTGCTCCATGCCCTCCT +
Preference number: 3 (lower is better)
Translates to: TPSLSIILVDLVTPRFFILWHNC*SAPCPP
Trigger: AGGAGGGCATGGAGCAGACAAGCAATTGTGCCAAAG...AATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CAA 90 bp CAGGTAGACACAAGTTTCTCAGCACAGCAAAGATCATGTCTGTGGTTAAACTCAACTGCTTTGGCACAATaGCTTGTCTGCTCCATGCCC +
Preference number: 3 (lower is better)
Translates to: QVDTSFSAQQRSCLWLNSTALAQ*LVCSMP
Trigger: GGGCATGGAGCAGACAAGCAATTGTGCCAAAGCAGT...TGAGTTTAACCACAGACATGATCTTTGCTGTGCTGAGAAACTTGTGTCTACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CAA 90 bp GAAGTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCCCTGTCTATTATCTaGGTGGATTTGGTTACCCCG +
Preference number: 3 (lower is better)
Translates to: EVSLNRKGVCFSALSSILSLSII*VDLVTP
Trigger: CGGGGTAACCAAATCCACCAAGATAATAGACAGGGA...TAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CAA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTTTCTGGGAAGTCTCCTaGAACAGGAAGGGTGTGTGC +
Preference number: 3 (lower is better)
Translates to: RPTSTTRTKSYATIINCTFWEVS*NRKGVC
Trigger: GCACACACCCTTCCTGTTCAAGGAGACTTCCCAGAA...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR CCA 72 bp TCACATCCTACTAATGGTAGAGAAATAGAAGAAGCCTaGGACCTGGATTACTTCACAGGGTCCCAGGATGGT +
Preference number: 3 (lower is better)
Translates to: SHPTNGREIEEA*DLDYFTGSQDG
Trigger: ACCATCCTGGGACCCTGTGAAGTAATCCAGGTCCCAGGCTTCTTCTATTTCTCTACCATTAGTAGGATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CAA 90 bp ATCTTTACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTATCTaGGTGGATTTGGTTACCCCG +
Preference number: 3 (lower is better)
Translates to: IFTFCYTVVVQLPKCLTPSLSII*VDLVTP
Trigger: CGGGGTAACCAAATCCACCAAGATAATAGACAGGGA...TGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGTAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CAA 90 bp CAGGTAGACACAAGTTTCTCAGCACAGCAAAGATCATGTCTGTGGTTAAACTCACTGTTGGAGGAAACTTaGGCAGATGCAATTCCTCCC +
Preference number: 3 (lower is better)
Translates to: QVDTSFSAQQRSCLWLNSLLEET*ADAIPP
Trigger: GGGAGGAATTGCATCTGCCAAAGTTTCCTCCAACAG...TGAGTTTAACCACAGACATGATCTTTGCTGTGCTGAGAAACTTGTGTCTACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR TCA 72 bp TTAGGGCAGGGAATCAAAAAGAGTTTGTCCATTGGGTaGACTGCTTTGGCACAATTGCTTGTCTGCTCCATG +
Preference number: 3 (lower is better)
Translates to: LGQGIKKSLSIG*TALAQLLVCSM
Trigger: CATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTTTTGATTCCCTGCCCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR GCA 72 bp GGAAGTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTaGCCTTTCCTCTATTTTATCAGAAACATGGATGTG +
Preference number: 3 (lower is better)
Translates to: GSLLEQEGCVLL*PFLYFIRNMDV
Trigger: CACATCCATGTTTCTGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR GCA 72 bp GACTTCTGGGAAGTCTCCTTGAACAGGAAGGGTGTGTaGTTCTCTGCCCTTTCCTCTATTTTATCAGAAACA +
Preference number: 3 (lower is better)
Translates to: DFWEVSLNRKGV*FSALSSILSET
Trigger: TGTTTCTGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGACTTCCCAGAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR CCA 72 bp GTCTCACTCCATCCCTGTCTATTATCTTGGTGGATTTaGTTACCCCGAGGTTCTTTATTCTCCCTGACACAT +
Preference number: 3 (lower is better)
Translates to: VSLHPCLLSWWI*LPRGSLFSLTH
Trigger: ATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGTGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CAA 90 bp GAAGTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTAATTATCTTGGTGGATTaGGTTACCCCGAGGTTCTTT +
Preference number: 3 (lower is better)
Translates to: EVSLNRKGVCFSALSSILIILVD*VTPRFF
Trigger: AAAGAACCTCGGGGTAACCAAATCCACCAAGATAAT...TAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR TCA 72 bp GCAAAGATCATGTCTGTGGTTAAACTCAGAAAGGTCTaGGGGAGTAAAGCTCTGAGTGAGGTTTTGCCAAAC +
Preference number: 3 (lower is better)
Translates to: AKIMSVVKLRKV*GSKALSEVLPN
Trigger: GTTTGGCAAAACCTCACTCAGAGCTTTACTCCCTCAGACCTTTCTGAGTTTAACCACAGACATGATCTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR CCA 72 bp GATTTTAGGGCAGGGAATCAAAAAGAGTTTGTCCATTaGGTGAACTGCTTTGGCACAATTGCTTGTCTGCTC +
Preference number: 3 (lower is better)
Translates to: DFRAGNQKEFVH*VNCFGTIACLL
Trigger: GAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTTTTGATTCCCTGCCCTAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR CCA 72 bp CTAAATGTCTCACTCCATCCCTGTCTATTATCTTGGTaGATTTGGTTACCCCGAGGTTCTTTATTCTCCCTG +
Preference number: 3 (lower is better)
Translates to: LNVSLHPCLLSW*IWLPRGSLFSL
Trigger: CAGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGTGAGACATTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR CCA 72 bp GACACAAGTTTCTCAGCACAGCAAAGATCATGTCTGTaGTTAAACTCAGAAAGGTCTGAGGGAGTAAAGCTC +
Preference number: 3 (lower is better)
Translates to: DTSFSAQQRSCL*LNSERSEGVKL
Trigger: GAGCTTTACTCCCTCAGACCTTTCTGAGTTTAACCACAGACATGATCTTTGCTGTGCTGAGAAACTTGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CAA 90 bp AAACAAAACCCAAATAACCATTCTTCCTTTTTCTTGCCAATTAGCGTGAACCCACTTTGGCACAATTGCTaGTCTGCTCCATGCCCTCCT +
Preference number: 3 (lower is better)
Translates to: KQNPNNHSSFFLPISVNPLWHNC*SAPCPP
Trigger: AGGAGGGCATGGAGCAGACAAGCAATTGTGCCAAAG...TGGGTTCACGCTAATTGGCAAGAAAAAGGAAGAATGGTTATTTGGGTTTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CAA 90 bp AAACAAAACCCAAATAACCATTCTTCCTTTTTCTTGCCAATTAGCGTGAACCCAACTGCTTTGGCACAATaGCTTGTCTGCTCCATGCCC +
Preference number: 3 (lower is better)
Translates to: KQNPNNHSSFFLPISVNPTALAQ*LVCSMP
Trigger: GGGCATGGAGCAGACAAGCAATTGTGCCAAAGCAGT...TGGGTTCACGCTAATTGGCAAGAAAAAGGAAGAATGGTTATTTGGGTTTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CAA 90 bp GGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCAGAAACATGGATGTATTATCTTGGTGGATTaGGTTACCCCGAGGTTCTTT +
Preference number: 3 (lower is better)
Translates to: GRVCASLPFPLFYQKHGCIILVD*VTPRFF
Trigger: AAAGAACCTCGGGGTAACCAAATCCACCAAGATAAT...ACATCCATGTTTCTGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CAA 90 bp ATCTTTACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCAATTATCTTGGTGGATTaGGTTACCCCGAGGTTCTTT +
Preference number: 3 (lower is better)
Translates to: IFTFCYTVVVQLPKCLTPIILVD*VTPRFF
Trigger: AAAGAACCTCGGGGTAACCAAATCCACCAAGATAAT...TGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGTAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CAA 90 bp AAACAAAACCCAAATAACCATTCTTCCTTTTTCTTGCCAATTAGCGTGAACCCATTCTGGGAAGTCTCCTaGAACAGGAAGGGTGTGTGC +
Preference number: 3 (lower is better)
Translates to: KQNPNNHSSFFLPISVNPFWEVS*NRKGVC
Trigger: GCACACACCCTTCCTGTTCAAGGAGACTTCCCAGAA...TGGGTTCACGCTAATTGGCAAGAAAAAGGAAGAATGGTTATTTGGGTTTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR CCA 72 bp TTCCTAAATGTCTCACTCCATCCCTGTCTATTATCTTaGTGGATTTGGTTACCCCGAGGTTCTTTATTCTCC +
Preference number: 3 (lower is better)
Translates to: FLNVSLHPCLLS*WIWLPRGSLFS
Trigger: GGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGTGAGACATTTAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CAA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTATTATCTTGGTGGATTaGGTTACCCCGAGGTTCTTT +
Preference number: 3 (lower is better)
Translates to: RPTSTTRTKSYATIINCTIILVD*VTPRFF
Trigger: AAAGAACCTCGGGGTAACCAAATCCACCAAGATAAT...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CAA 90 bp CTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCCATGTGACTGAGGTCTaGCCAATGAGATATAAGAAG +
Preference number: 3 (lower is better)
Translates to: LHHQDKELCYYYKLYSPVHVTEV*PMRYKK
Trigger: CTTCTTATATCTCATTGGCAAGACCTCAGTCACATG...GACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CAA 90 bp ATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAAATTCAAAAGAGTTTGTCCATaGGGTGAACTGCTTTGGCAC +
Preference number: 3 (lower is better)
Translates to: MNKKRAPAILIRTQISKFKRVCP*GELLWH
Trigger: GTGCCAAAGCAGTTCACCCAATGGACAAACTCTTTT...GAATTTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CAA 90 bp AAACAAAACCCAAATAACCATTCTTCCTTTTTCTTGCCAATTAGCGTGAACCCACATTTCCAGCCTCTTTaGCTCATGACATCATGTGAC +
Preference number: 3 (lower is better)
Translates to: KQNPNNHSSFFLPISVNPHFQPL*LMTSCD
Trigger: GTCACATGATGTCATGAGCAAAAGAGGCTGGAAATG...TGGGTTCACGCTAATTGGCAAGAAAAAGGAAGAATGGTTATTTGGGTTTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR TCA 72 bp TTTCCTCTATTTTATCAGAAACATGGATGTGATGGCTaGAGATGTAATCAGCACTGGGATGTTGGGGATAAG +
Preference number: 3 (lower is better)
Translates to: FPLFYQKHGCDG*RCNQHWDVGDK
Trigger: CTTATCCCCAACATCCCAGTGCTGATTACATCTTCAGCCATCACATCCATGTTTCTGATAAAATAGAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CAA 90 bp TTACAGAAGCTTAATTGCAAAGTACGTGAGGTGCTAATATCGATGTATAGCATAAAAAGAGTTTGTCCATaGGGTGAACTGCTTTGGCAC +
Preference number: 3 (lower is better)
Translates to: LQKLNCKVREVLISMYSIKRVCP*GELLWH
Trigger: GTGCCAAAGCAGTTCACCCAATGGACAAACTCTTTT...TATGCTATACATCGATATTAGCACCTCACGTACTTTGCAATTAAGCTTCTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CAA 90 bp TTACAGAAGCTTAATTGCAAAGTACGTGAGGTGCTAATATCGATGTATAGCATACATTTCCAGCCTCTTTaGCTCATGACATCATGTGAC +
Preference number: 3 (lower is better)
Translates to: LQKLNCKVREVLISMYSIHFQPL*LMTSCD
Trigger: GTCACATGATGTCATGAGCAAAAGAGGCTGGAAATG...TATGCTATACATCGATATTAGCACCTCACGTACTTTGCAATTAAGCTTCTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CAA 90 bp TCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCCAACCATATTAGCAGTTaGGGGGTTCTGAATGTATTT +
Preference number: 3 (lower is better)
Translates to: STTRTKSYATIINCTLLSNHISS*GVLNVF
Trigger: AAATACATTCAGAACCCCCAAACTGCTAATATGGTT...GGACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR-3UTR CAA 90 bp TTACAGAAGCTTAATTGCAAAGTACGTGAGGTGCTAATATCGATGTATAGCATAGGCAAAGATTCTGACTaGCCTACCAAGATAACCATT +
Preference number: 3 (lower is better)
Translates to: LQKLNCKVREVLISMYSIGKDSD*PTKITI
Trigger: AATGGTTATCTTGGTAGGCAAGTCAGAATCTTTGCC...TATGCTATACATCGATATTAGCACCTCACGTACTTTGCAATTAAGCTTCTGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp GAGAGAGTTCCTCTGAAGGTGGAGCTCAGCACCATACATCAGGCAAATGTCCTGGGCGGGGAGCGGTTCTaGTCCGGGAGGATGCGGCTT +
Preference number: 4 (lower is better)
Translates to: ERVPLKVELSTIHQANVLGGERF*SGRMRL
Trigger: AAGCCGCATCCTCCCGGAGCAGAACCGCTCCCCGCC...CAGGACATTTGCCTGATGTATGGTGCTGAGCTCCACCTTCAGAGGAACTCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295658.8
ENST00000454545.5
CDS-3UTR GCA 90 bp ATAAGAAGAATCGAGTGGGACTTCTGGGAAGTCTCCTTGAACAGGAAGGGTGTGGACGCTGGCGGAGGTTaGGGACAGCCGGCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: IRRIEWDFWEVSLNRKGVDAGGG*GQPAGS
Trigger: GCTCCCCGCCGGCTGTCCGCAACCTCCGCCAGCGTC...CACACCCTTCCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp GTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCAGACGCTGGCGGAGGTTaGGGACAGCCGGCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: VSLNRKGVCFSALSSILSDAGGG*GQPAGS
Trigger: GCTCCCCGCCGGCTGTCCGCAACCTCCGCCAGCGTC...TGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp CAGGCACCAGTAACACTTCCAGGCTCCCAAAACGACACACAGCAGAGTTCCATTAGTCTCACCCACACCTaGCCAGGGACCGACGCTGGC +
Preference number: 4 (lower is better)
Translates to: QAPVTLPGSQNDTQQSSISLTHT*PGTDAG
Trigger: GCCAGCGTCGGTCCCTGGGCAGGTGTGGGTGAGACT...AATGGAACTCTGCTGTGTGTCGTTTTGGGAGCCTGGAAGTGTTACTGGTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406027.2
CDS-3UTR GCA 90 bp ATAAGAAGAATCGAGTGGGACTTCTGGGAAGTCTCCTTGAACAGGAAGGGTGTGTCTGCTCCGGGAGGATaGGGCTTTGCCGCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: IRRIEWDFWEVSLNRKGVSAPGG*GFAAAG
Trigger: GCCGGCCGCGGCAAAGCCGCATCCTCCCGGAGCAGA...CACACCCTTCCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454545.5
CDS-3UTR CCA 90 bp GAAGTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTACCCAGGGACCGACGCTaGCGGAGGTTGCGGACAGCC +
Preference number: 4 (lower is better)
Translates to: EVSLNRKGVCFSALSSILPRDRR*RRLRTA
Trigger: GGCTGTCCGCAACCTCCGCCAGCGTCGGTCCCTGGG...TAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp CTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATGACGCTGGCGGAGGTTaGGGACAGCCGGCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LLSWWIWLPRGSLFSLTHDAGGG*GQPAGS
Trigger: GCTCCCCGCCGGCTGTCCGCAACCTCCGCCAGCGTC...ATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp GAGAGAGTTCCTCTGAAGGTGGAGCTCAGCACCATACATCAGGCAAATGTCCTGATGTCCCGGGCAGCTTaGCACCATGCTTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: ERVPLKVELSTIHQANVLMSRAA*HHASQD
Trigger: GTCCTGGGAAGCATGGTGGCAAGCTGCCCGGGACAT...CAGGACATTTGCCTGATGTATGGTGCTGAGCTCCACCTTCAGAGGAACTCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp GGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCAGAAACATGGATGTCCCAGGGACCGACGCTaGCGGAGGTTGCGGACAGCC +
Preference number: 4 (lower is better)
Translates to: GRVCASLPFPLFYQKHGCPRDRR*RRLRTA
Trigger: GGCTGTCCGCAACCTCCGCCAGCGTCGGTCCCTGGG...ACATCCATGTTTCTGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ATAAGAAGAATCGAGTGGGACTTCTGGGAAGTCTCCTTGAACAGGAAGGGTGTGGTCCAGAGGACCACATaGGGCCCACGGTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: IRRIEWDFWEVSLNRKGVVQRTT*GPRSAP
Trigger: GGGAGCTGACCGTGGGCCCCATGTGGTCCTCTGGAC...CACACCCTTCCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATTTAGTCACATACTCCCCCAGGGACCGACGCTaGCGGAGGTTGCGGACAGCC +
Preference number: 4 (lower is better)
Translates to: IWLPRGSLFSLTHLVTYSPRDRR*RRLRTA
Trigger: GGCTGTCCGCAACCTCCGCCAGCGTCGGTCCCTGGG...GGAGTATGTGACTAAATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp TGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTGTCCAGAGGACCACATaGGGCCCACGGTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: CYTVVVQLPKCLTPSLSIVQRTT*GPRSAP
Trigger: GGGAGCTGACCGTGGGCCCCATGTGGTCCTCTGGAC...AATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp CAGGCACCAGTAACACTTCCAGGCTCCCAAAACGACACACAGCAGAGTTCCATTCTGATCTCCACCTTCTaGTTCTCCGGGCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: QAPVTLPGSQNDTQQSSILISTF*FSGLLI
Trigger: GATGAGGAGCCCGGAGAATCAGAAGGTGGAGATCAG...AATGGAACTCTGCTGTGTGTCGTTTTGGGAGCCTGGAAGTGTTACTGGTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp ATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATTTAGTCACATACTCCGGCGGGGAGCGGTTCTaGTCCGGGAGGATGCGGCTT +
Preference number: 4 (lower is better)
Translates to: IWLPRGSLFSLTHLVTYSGGERF*SGRMRL
Trigger: AAGCCGCATCCTCCCGGAGCAGAACCGCTCCCCGCC...GGAGTATGTGACTAAATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295658.8
ENST00000454545.5
CDS-3UTR GCA 90 bp ATAAGAAGAATCGAGTGGGACTTCTGGGAAGTCTCCTTGAACAGGAAGGGTGTGATGTCCCGGGCAGCTTaGCACCATGCTTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: IRRIEWDFWEVSLNRKGVMSRAA*HHASQD
Trigger: GTCCTGGGAAGCATGGTGGCAAGCTGCCCGGGACAT...CACACCCTTCCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp CAGGCACCAGTAACACTTCCAGGCTCCCAAAACGACACACAGCAGAGTTCCATTTGCTTGTCTGCTCCATaGCCTCCTGGAACCCTCAAG +
Preference number: 4 (lower is better)
Translates to: QAPVTLPGSQNDTQQSSICLSAP*PPGTLK
Trigger: CTTGAGGGTTCCAGGAGGGCATGGAGCAGACAAGCA...AATGGAACTCTGCTGTGTGTCGTTTTGGGAGCCTGGAAGTGTTACTGGTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCAGCTGCACCACACCTaGCCAGGGACCGACGCTGGC +
Preference number: 4 (lower is better)
Translates to: RPTSTTRTKSYATIINCTQLHHT*PGTDAG
Trigger: GCCAGCGTCGGTCCCTGGGCAGGTGTGGTGCAGCTG...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454545.5
CDS-3UTR CCA 90 bp ATAAGAAGAATCGAGTGGGACTTCTGGGAAGTCTCCTTGAACAGGAAGGGTGTGTTCCTGAGAGAGCCCTaGTGGGGGCTTGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: IRRIEWDFWEVSLNRKGVFLREP*WGLGSW
Trigger: CCAGCTTCCAAGCCCCCACCAGGGCTCTCTCAGGAA...CACACCCTTCCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp CAGGCACCAGTAACACTTCCAGGCTCCCAAAACGACACACAGCAGAGTTCCATTCGGTCAGCTCCCATCTaGCAGGCCATTCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: QAPVTLPGSQNDTQQSSIRSAPI*QAILPS
Trigger: TGAAGGAAGAATGGCCTGCCAGATGGGAGCTGACCG...AATGGAACTCTGCTGTGTGTCGTTTTGGGAGCCTGGAAGTGTTACTGGTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ATCTTTACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCAGTCCAGAGGACCACATaGGGCCCACGGTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: IFTFCYTVVVQLPKCLTPVQRTT*GPRSAP
Trigger: GGGAGCTGACCGTGGGCCCCATGTGGTCCTCTGGAC...TGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGTAAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp AGAAACATGGATGTGATGGCTGAAGATGTAATCAGCACTGGGATGTTGGGGATAGATGCATTCCACACCTaGCCAGGGACCGACGCTGGC +
Preference number: 4 (lower is better)
Translates to: RNMDVMAEDVISTGMLGIDAFHT*PGTDAG
Trigger: GCCAGCGTCGGTCCCTGGGCAGGTGTGGAATGCATC...TATCCCCAACATCCCAGTGCTGATTACATCTTCAGCCATCACATCCATGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295658.8
CDS-3UTR GCA 90 bp ACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTGCTTGTCTGCTCCATaGCCTCCTGGAACCCTCAAG +
Preference number: 4 (lower is better)
Translates to: TFCYTVVVQLPKCLTPSLCLSAP*PPGTLK
Trigger: CTTGAGGGTTCCAGGAGGGCATGGAGCAGACAAGCA...CAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp ATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATTTAGTCACATACTCCCATTCCACCCACACCTaGCCAGGGACCGACGCTGGC +
Preference number: 4 (lower is better)
Translates to: IWLPRGSLFSLTHLVTYSHSTHT*PGTDAG
Trigger: GCCAGCGTCGGTCCCTGGGCAGGTGTGGGTGGAATG...GGAGTATGTGACTAAATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437356.7
CDS-3UTR CCA 90 bp GTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCATTCCTGAGAGAGCCCTaGTGGGGGCTTGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: VSLNRKGVCFSALSSILSFLREP*WGLGSW
Trigger: CCAGCTTCCAAGCCCCCACCAGGGCTCTCTCAGGAA...TGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ATAAGAAGAATCGAGTGGGACTTCTGGGAAGTCTCCTTGAACAGGAAGGGTGTGTCCTGTGCCCCATTGTaGATTCCCCATCCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: IRRIEWDFWEVSLNRKGVSCAPL*IPHPAP
Trigger: TGGCGCTGGATGGGGAATCCACAATGGGGCACAGGA...CACACCCTTCCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp CAGGCACCAGTAACACTTCCAGGCTCCCAAAACGACACACAGCAGAGTTCCATTTGTAATCCCAGCTACTaGGGAGGCCAAGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: QAPVTLPGSQNDTQQSSICNPSY*GGQGTR
Trigger: TCTTGTGCCTTGGCCTCCCCAGTAGCTGGGATTACA...AATGGAACTCTGCTGTGTGTCGTTTTGGGAGCCTGGAAGTGTTACTGGTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp GAGAGAGTTCCTCTGAAGGTGGAGCTCAGCACCATACATCAGGCAAATGTCCTGATCAGGCAAATGTCCTaGGCTCTCTGTGGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: ERVPLKVELSTIHQANVLIRQMS*ALCGEH
Trigger: ATGCTCCCCACAGAGAGCCCAGGACATTTGCCTGAT...CAGGACATTTGCCTGATGTATGGTGCTGAGCTCCACCTTCAGAGGAACTCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp AAAGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTGCTTGTCTGCTCCATATGTCCCGGGCAGCTTaGCACCATGCTTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: KEFVHWVNCFGTIACLLHMSRAA*HHASQD
Trigger: GTCCTGGGAAGCATGGTGGCAAGCTGCCCGGGACAT...ATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp TCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCTCCCTTTCCTGAGAGAGCCCTaGTGGGGGCTTGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLSIILVDLVTPRFFILPFLREP*WGLGSW
Trigger: CCAGCTTCCAAGCCCCCACCAGGGCTCTCTCAGGAA...AGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp CTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCGTCCAGAGGACCACATaGGGCCCACGGTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LHHQDKELCYYYKLYSPVVQRTT*GPRSAP
Trigger: GGGAGCTGACCGTGGGCCCCATGTGGTCCTCTGGAC...GACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGATCAGGCAAATGTCCTaGGCTCTCTGTGGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: TFCYTVVVQLPKCLTPSLIRQMS*ALCGEH
Trigger: ATGCTCCCCACAGAGAGCCCAGGACATTTGCCTGAT...CAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp TGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTCTGATCTCCACCTTCTaGTTCTCCGGGCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: CYTVVVQLPKCLTPSLSILISTF*FSGLLI
Trigger: GATGAGGAGCCCGGAGAATCAGAAGGTGGAGATCAG...AATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ATAAGAAGAATCGAGTGGGACTTCTGGGAAGTCTCCTTGAACAGGAAGGGTGTGTCTGGGAAGTCTCCTTaGACAGGAAGGGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: IRRIEWDFWEVSLNRKGVSGKSP*TGRVCA
Trigger: AGCACACACCCTTCCTGTTCAAGGAGACTTCCCAGA...CACACCCTTCCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTATGTCCCGGGCAGCTTaGCACCATGCTTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RPTSTTRTKSYATIINCTMSRAA*HHASQD
Trigger: GTCCTGGGAAGCATGGTGGCAAGCTGCCCGGGACAT...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp ACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGCTGCTTTGGCACAATTaGTTGTCTGCTCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: TFCYTVVVQLPKCLTPSLLLWHN*LSAPCP
Trigger: AGGGCATGGAGCAGACAAGCAATTGTGCCAAAGCAG...CAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp TTACAGAAGCTTAATTGCAAAGTACGTGAGGTGCTAATATCGATGTATAGCATACCCAGGGACCGACGCTaGCGGAGGTTGCGGACAGCC +
Preference number: 4 (lower is better)
Translates to: LQKLNCKVREVLISMYSIPRDRR*RRLRTA
Trigger: GGCTGTCCGCAACCTCCGCCAGCGTCGGTCCCTGGG...TATGCTATACATCGATATTAGCACCTCACGTACTTTGCAATTAAGCTTCTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp GAAGTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTACTTGGAAGCTGGACCTaGCCTTCTACTGCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: EVSLNRKGVCFSALSSILLGSWT*PSTAVG
Trigger: GCCAACAGCAGTAGAAGGCCAGGTCCAGCTTCCAAG...TAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp GGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCAGAAACATGGATGTTCCTGTGCCCCATTGTaGATTCCCCATCCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: GRVCASLPFPLFYQKHGCSCAPL*IPHPAP
Trigger: TGGCGCTGGATGGGGAATCCACAATGGGGCACAGGA...ACATCCATGTTTCTGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp TCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCTCCCTCTGATCTCCACCTTCTaGTTCTCCGGGCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: SLSIILVDLVTPRFFILPLISTF*FSGLLI
Trigger: GATGAGGAGCCCGGAGAATCAGAAGGTGGAGATCAG...AGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTTGGTCCCAGTTAAGGTaGCGTAGCGGCTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: RPTSTTRTKSYATIINCTWSQLR*RSGCPE
Trigger: CTCTGGACAGCCGCTACGTCACCTTAACTGGGACCA...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp CAGGCACCAGTAACACTTCCAGGCTCCCAAAACGACACACAGCAGAGTTCCATTGTTGGAGAGAGTGCTTaGGATATTGTCGGATTCAAG +
Preference number: 4 (lower is better)
Translates to: QAPVTLPGSQNDTQQSSIVGESA*DIVGFK
Trigger: CTTGAATCCGACAATATCTCAAGCACTCTCTCCAAC...AATGGAACTCTGCTGTGTGTCGTTTTGGGAGCCTGGAAGTGTTACTGGTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGGATCAGTATGGACTCTaGTTTCCCAGAAGAACTGCG +
Preference number: 4 (lower is better)
Translates to: TFCYTVVVQLPKCLTPSLDQYGL*FPRRTA
Trigger: CGCAGTTCTTCTGGGAAATCAGAGTCCATACTGATC...CAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp CAGGCACCAGTAACACTTCCAGGCTCCCAAAACGACACACAGCAGAGTTCCATTAAACTCAGAAAGGTCTaGGGGAGTAAAGCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: QAPVTLPGSQNDTQQSSIKLRKV*GSKALS
Trigger: ACTCAGAGCTTTACTCCCTCAGACCTTTCTGAGTTT...AATGGAACTCTGCTGTGTGTCGTTTTGGGAGCCTGGAAGTGTTACTGGTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp TGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTAAGAGAGAGTTCCTCTaGAGGTGGAGCTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: CYTVVVQLPKCLTPSLSIKREFL*RWSSAP
Trigger: TGGTGCTGAGCTCCACCTTCAGAGGAACTCTCTCTT...AATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp TCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCCTTCCTGAGAGAGCCCTaGTGGGGGCTTGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: STTRTKSYATIINCTLLSFLREP*WGLGSW
Trigger: CCAGCTTCCAAGCCCCCACCAGGGCTCTCTCAGGAA...GGACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp GGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCAGAAACATGGATGTCGGTCAGCTCCCATCTaGCAGGCCATTCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: GRVCASLPFPLFYQKHGCRSAPI*QAILPS
Trigger: TGAAGGAAGAATGGCCTGCCAGATGGGAGCTGACCG...ACATCCATGTTTCTGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp TCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCTCCCTCGGTCAGCTCCCATCTaGCAGGCCATTCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: SLSIILVDLVTPRFFILPRSAPI*QAILPS
Trigger: TGAAGGAAGAATGGCCTGCCAGATGGGAGCTGACCG...AGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ATAAGAAGAATCGAGTGGGACTTCTGGGAAGTCTCCTTGAACAGGAAGGGTGTGGGCCATGATGAGCACTaGATAGAAGAGAACGAGGCA +
Preference number: 4 (lower is better)
Translates to: IRRIEWDFWEVSLNRKGVGHDEH*IEENEA
Trigger: TGCCTCGTTCTCTTCTATCCAGTGCTCATCATGGCC...CACACCCTTCCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp AAAGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTGCTTGTCTGCTCCATCACAGGGTCCCAGGATaGTCTGCCTCCAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: KEFVHWVNCFGTIACLLHHRVPG*SASRLL
Trigger: AAGAAGTCTGGAGGCAGACCATCCTGGGACCCTGTG...ATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp GTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCAAAGAAGCCTGGGACCTaGATTACTTCACAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: VSLNRKGVCFSALSSILSKKPGT*ITSQGP
Trigger: GGGACCCTGTGAAGTAATCCAGGTCCCAGGCTTCTT...TGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp CAGGCACCAGTAACACTTCCAGGCTCCCAAAACGACACACAGCAGAGTTCCATTTGTTGGAGGAAACTTTaGCAGATGCAATTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: QAPVTLPGSQNDTQQSSICWRKL*QMQFLP
Trigger: AGGGAGGAATTGCATCTGCCAAAGTTTCCTCCAACA...AATGGAACTCTGCTGTGTGTCGTTTTGGGAGCCTGGAAGTGTTACTGGTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp GAGAGAGTTCCTCTGAAGGTGGAGCTCAGCACCATACATCAGGCAAATGTCCTGTGTTGGAGGAAACTTTaGCAGATGCAATTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: ERVPLKVELSTIHQANVLCWRKL*QMQFLP
Trigger: AGGGAGGAATTGCATCTGCCAAAGTTTCCTCCAACA...CAGGACATTTGCCTGATGTATGGTGCTGAGCTCCACCTTCAGAGGAACTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGGCTACTGATCGCTGTTaGAGGAAACTTTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: TFCYTVVVQLPKCLTPSLATDRC*RKLWQM
Trigger: CATCTGCCAAAGTTTCCTCCAACAGCGATCAGTAGC...CAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp CTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATAGGATGCATTCCACCTaGAGCCACAGCATCGCCGAC +
Preference number: 4 (lower is better)
Translates to: LLSWWIWLPRGSLFSLTHRMHST*SHSIAD
Trigger: GTCGGCGATGCTGTGGCTCCAGGTGGAATGCATCCT...ATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406027.2
ENST00000454545.5
CDS-3UTR TCA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTGATCTCCACCTTCTaGTTCTCCGGGCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: RPTSTTRTKSYATIINCTLISTF*FSGLLI
Trigger: GATGAGGAGCCCGGAGAATCAGAAGGTGGAGATCAG...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp TGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTTGGATGTCCACCATCTaGCCCTTTTTCTTCCCTCGT +
Preference number: 4 (lower is better)
Translates to: CYTVVVQLPKCLTPSLSIWMSTI*PFFFPR
Trigger: ACGAGGGAAGAAAAAGGGTCAGATGGTGGACATCCA...AATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp CAGGCACCAGTAACACTTCCAGGCTCCCAAAACGACACACAGCAGAGTTCCATTGCTGGAATTTTAAGATaGTATATAGGCTACTGGGGC +
Preference number: 4 (lower is better)
Translates to: QAPVTLPGSQNDTQQSSIAGILR*YIGYWG
Trigger: GCCCCAGTAGCCTATATATCATCTTAAAATTCCAGC...AATGGAACTCTGCTGTGTGTCGTTTTGGGAGCCTGGAAGTGTTACTGGTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp GAGAGAGTTCCTCTGAAGGTGGAGCTCAGCACCATACATCAGGCAAATGTCCTGGCTGGAATTTTAAGATaGTATATAGGCTACTGGGGC +
Preference number: 4 (lower is better)
Translates to: ERVPLKVELSTIHQANVLAGILR*YIGYWG
Trigger: GCCCCAGTAGCCTATATATCATCTTAAAATTCCAGC...CAGGACATTTGCCTGATGTATGGTGCTGAGCTCCACCTTCAGAGGAACTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGAACCCAGTATTTAGCTaGGAATATAGCTACCCAGCC +
Preference number: 4 (lower is better)
Translates to: TFCYTVVVQLPKCLTPSLNPVFS*EYSYPA
Trigger: GGCTGGGTAGCTATATTCTCAGCTAAATACTGGGTT...CAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp GGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCAGAAACATGGATGTGGCACAAGAATTGCTTaGACCCAGGAGGCGAAGGTT +
Preference number: 4 (lower is better)
Translates to: GRVCASLPFPLFYQKHGCGTRIA*TQEAKV
Trigger: AACCTTCGCCTCCTGGGTTCAAGCAATTCTTGTGCC...ACATCCATGTTTCTGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp TGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTAGCCTGGGCACATGGTaGAACCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: CYTVVVQLPKCLTPSLSISLGTW*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCATGTGCCCAGGCT...AATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGAAACTCAGAAAGGTCTaGGGGAGTAAAGCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: TFCYTVVVQLPKCLTPSLKLRKV*GSKALS
Trigger: ACTCAGAGCTTTACTCCCTCAGACCTTTCTGAGTTT...CAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTTGCTTGTCTGCTCCATaGCCTCCTGGAACCCTCAAG +
Preference number: 4 (lower is better)
Translates to: RPTSTTRTKSYATIINCTCLSAP*PPGTLK
Trigger: CTTGAGGGTTCCAGGAGGGCATGGAGCAGACAAGCA...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp GTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCACTGCTTTGGCACAATTaGTTGTCTGCTCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: VSLNRKGVCFSALSSILSLLWHN*LSAPCP
Trigger: AGGGCATGGAGCAGACAAGCAATTGTGCCAAAGCAG...TGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp GAGAGAGTTCCTCTGAAGGTGGAGCTCAGCACCATACATCAGGCAAATGTCCTGCAAATCTTTACCTTCTaGTACACTGTGGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: ERVPLKVELSTIHQANVLQIFTF*YTVVVQ
Trigger: CTGGACTACCACAGTGTAGCAGAAGGTAAAGATTTG...CAGGACATTTGCCTGATGTATGGTGCTGAGCTCCACCTTCAGAGGAACTCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp GAAGTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTAAACAGGAAGGGTGTGTaGTTCTCTGCCCTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: EVSLNRKGVCFSALSSILNRKGV*FSALSS
Trigger: AGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTT...TAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp AAAGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTGCTTGTCTGCTCCATAAGATGTCCCAAGGATaGATTCCACCCACACCTGCC +
Preference number: 4 (lower is better)
Translates to: KEFVHWVNCFGTIACLLHKMSQG*IPPTPA
Trigger: GGCAGGTGTGGGTGGAATGCATCCTTGGGACATCTT...ATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437356.7
CDS-3UTR CCA 90 bp GAAGTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTAGCCTTCTACTGCTGTTaGCTCTTCCATTCCAGACCT +
Preference number: 4 (lower is better)
Translates to: EVSLNRKGVCFSALSSILAFYCC*LFHSRP
Trigger: AGGTCTGGAATGGAAGAGCCAACAGCAGTAGAAGGC...TAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATTTAGTCACATACTCCCTTGGAAGCTGGACCTaGCCTTCTACTGCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: IWLPRGSLFSLTHLVTYSLGSWT*PSTAVG
Trigger: GCCAACAGCAGTAGAAGGCCAGGTCCAGCTTCCAAG...GGAGTATGTGACTAAATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp CAGGTAGACACAAGTTTCTCAGCACAGCAAAGATCATGTCTGTGGTTAAACTCACTTGGAAGCTGGACCTaGCCTTCTACTGCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: QVDTSFSAQQRSCLWLNSLGSWT*PSTAVG
Trigger: GCCAACAGCAGTAGAAGGCCAGGTCCAGCTTCCAAG...TGAGTTTAACCACAGACATGATCTTTGCTGTGCTGAGAAACTTGTGTCTACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ACTCCATCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCGGTCAGCTCCCATCTaGCAGGCCATTCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: TPSLSIILVDLVTPRFFIRSAPI*QAILPS
Trigger: TGAAGGAAGAATGGCCTGCCAGATGGGAGCTGACCG...AATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ATAAGAAGAATCGAGTGGGACTTCTGGGAAGTCTCCTTGAACAGGAAGGGTGTGGAGGTTTCTACTTCTTaGATGGGGTCCTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: IRRIEWDFWEVSLNRKGVEVSTS*MGSLLE
Trigger: CTCCAACAAGGACCCCATCCAAGAAGTAGAAACCTC...CACACCCTTCCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp TGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTGAGGGAGTAAGTTGTTaGGAGTTTAGACCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: CYTVVVQLPKCLTPSLSIEGVSC*EFRPWR
Trigger: CCTCCACGGTCTAAACTCCCAACAACTTACTCCCTC...AATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp GAAGTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTAGAGGGAGTAAGTTGTTaGGAGTTTAGACCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: EVSLNRKGVCFSALSSILEGVSC*EFRPWR
Trigger: CCTCCACGGTCTAAACTCCCAACAACTTACTCCCTC...TAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp GAGAGAGTTCCTCTGAAGGTGGAGCTCAGCACCATACATCAGGCAAATGTCCTGTGTCTATTATCTTGGTaGATTTGGTTACCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: ERVPLKVELSTIHQANVLCLLSW*IWLPRG
Trigger: ACCTCGGGGTAACCAAATCCACCAAGATAATAGACA...CAGGACATTTGCCTGATGTATGGTGCTGAGCTCCACCTTCAGAGGAACTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp CAGGTAGACACAAGTTTCTCAGCACAGCAAAGATCATGTCTGTGGTTAAACTCACACAGGGTCCCAGGATaGTCTGCCTCCAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: QVDTSFSAQQRSCLWLNSHRVPG*SASRLL
Trigger: AAGAAGTCTGGAGGCAGACCATCCTGGGACCCTGTG...TGAGTTTAACCACAGACATGATCTTTGCTGTGCTGAGAAACTTGTGTCTACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ATGGTAAAACTGATCAGTATGGACTCTGATTTCCCAGAAGAACTGCGGAGAGTACACAGGGTCCCAGGATaGTCTGCCTCCAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: MVKLISMDSDFPEELRRVHRVPG*SASRLL
Trigger: AAGAAGTCTGGAGGCAGACCATCCTGGGACCCTGTG...TACTCTCCGCAGTTCTTCTGGGAAATCAGAGTCCATACTGATCAGTTTTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ACTCCATCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCACAGGGTCCCAGGATaGTCTGCCTCCAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: TPSLSIILVDLVTPRFFIHRVPG*SASRLL
Trigger: AAGAAGTCTGGAGGCAGACCATCCTGGGACCCTGTG...AATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp GGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCAGAAACATGGATGTTGTAATCCCAGCTACTaGGGAGGCCAAGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: GRVCASLPFPLFYQKHGCCNPSY*GGQGTR
Trigger: TCTTGTGCCTTGGCCTCCCCAGTAGCTGGGATTACA...ACATCCATGTTTCTGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTGTTTTCTCATTGTCTaGGCGGTAGATGATGATGGA +
Preference number: 4 (lower is better)
Translates to: TFCYTVVVQLPKCLTPSLCFLIV*AVDDDG
Trigger: TCCATCATCATCTACCGCTCAGACAATGAGAAAACA...CAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGGCTGGAATTTTAAGATaGTATATAGGCTACTGGGGC +
Preference number: 4 (lower is better)
Translates to: TFCYTVVVQLPKCLTPSLAGILR*YIGYWG
Trigger: GCCCCAGTAGCCTATATATCATCTTAAAATTCCAGC...CAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp CTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATTCTGGGAAGTCTCCTTaGACAGGAAGGGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: LLSWWIWLPRGSLFSLTHSGKSP*TGRVCA
Trigger: AGCACACACCCTTCCTGTTCAAGGAGACTTCCCAGA...ATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ACTCCATCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTTCTGGGAAGTCTCCTTaGACAGGAAGGGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: TPSLSIILVDLVTPRFFISGKSP*TGRVCA
Trigger: AGCACACACCCTTCCTGTTCAAGGAGACTTCCCAGA...AATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ACACAAATCTTTACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCGGCACAAGAATTGCTTaGACCCAGGAGGCGAAGGTT +
Preference number: 4 (lower is better)
Translates to: TQIFTFCYTVVVQLPKCLGTRIA*TQEAKV
Trigger: AACCTTCGCCTCCTGGGTTCAAGCAATTCTTGTGCC...GAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGTAAAGATTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp TGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTGAGGGAGTAAAGCTCTaGGTGAGGTTTTGCCAAACA +
Preference number: 4 (lower is better)
Translates to: CYTVVVQLPKCLTPSLSIEGVKL*VRFCQT
Trigger: TGTTTGGCAAAACCTCACTCAGAGCTTTACTCCCTC...AATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp GAAGTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTACAAACTCCTCTGGTTTaGTTCATCGCAGCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: EVSLNRKGVCFSALSSILQTPLV*FIAAVL
Trigger: GAGAACTGCTGCGATGAATCAAACCAGAGGAGTTTG...TAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp ATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATTTAGTCACATACTCCAAGATGTCCCAAGGATaGATTCCACACCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: IWLPRGSLFSLTHLVTYSKMSQG*IPHLPR
Trigger: CCTGGGCAGGTGTGGAATGCATCCTTGGGACATCTT...GGAGTATGTGACTAAATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295658.8
CDS-3UTR GCA 90 bp ACTCCATCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTGACCTGGCCTTCTACTaGTGTTGGCTCTTCCATTCC +
Preference number: 4 (lower is better)
Translates to: TPSLSIILVDLVTPRFFIDLAFY*CWLFHS
Trigger: GGAATGGAAGAGCCAACAGCAGTAGAAGGCCAGGTC...AATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTGACCTGGCCTTCTACTaGTGTTGGCTCTTCCATTCC +
Preference number: 4 (lower is better)
Translates to: RPTSTTRTKSYATIINCTDLAFY*CWLFHS
Trigger: GGAATGGAAGAGCCAACAGCAGTAGAAGGCCAGGTC...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp ATGGTAAAACTGATCAGTATGGACTCTGATTTCCCAGAAGAACTGCGGAGAGTAGACCTGGCCTTCTACTaGTGTTGGCTCTTCCATTCC +
Preference number: 4 (lower is better)
Translates to: MVKLISMDSDFPEELRRVDLAFY*CWLFHS
Trigger: GGAATGGAAGAGCCAACAGCAGTAGAAGGCCAGGTC...TACTCTCCGCAGTTCTTCTGGGAAATCAGAGTCCATACTGATCAGTTTTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp GGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCAGAAACATGGATGTCTGCTTTGGCACAATTaGTTGTCTGCTCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: GRVCASLPFPLFYQKHGCLLWHN*LSAPCP
Trigger: AGGGCATGGAGCAGACAAGCAATTGTGCCAAAGCAG...ACATCCATGTTTCTGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp ATAAGAAGAATCGAGTGGGACTTCTGGGAAGTCTCCTTGAACAGGAAGGGTGTGGTCCATTGGGTGAACTaGTTTGGCACAATTGCTTGT +
Preference number: 4 (lower is better)
Translates to: IRRIEWDFWEVSLNRKGVVHWVN*FGTIAC
Trigger: ACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGAC...CACACCCTTCCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp GGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCAGAAACATGGATGTAACAGGAAGGGTGTGTaGTTCTCTGCCCTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GRVCASLPFPLFYQKHGCNRKGV*FSALSS
Trigger: AGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTT...ACATCCATGTTTCTGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp AGAAACATGGATGTGATGGCTGAAGATGTAATCAGCACTGGGATGTTGGGGATAAACAGGAAGGGTGTGTaGTTCTCTGCCCTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: RNMDVMAEDVISTGMLGINRKGV*FSALSS
Trigger: AGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTT...TATCCCCAACATCCCAGTGCTGATTACATCTTCAGCCATCACATCCATGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp AAAGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTGCTTGTCTGCTCCATAAGATGTCCCAAGGATaGATTCCACCTGGAGCCACA +
Preference number: 4 (lower is better)
Translates to: KEFVHWVNCFGTIACLLHKMSQG*IPPGAT
Trigger: TGTGGCTCCAGGTGGAATGCATCCTTGGGACATCTT...ATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406027.2
ENST00000454545.5
CDS-3UTR GCA 90 bp ACACAAATCTTTACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCCTTTCTTTTTCCAGCTaGACCACACCTGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: TQIFTFCYTVVVQLPKCLLSFSS*TTPAQG
Trigger: TCCCTGGGCAGGTGTGGTGCAGCTGGAAAAAGAAAG...GAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGTAAAGATTTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454545.5
CDS-3UTR CCA 90 bp AGAAACATGGATGTGATGGCTGAAGATGTAATCAGCACTGGGATGTTGGGGATAGCCTTCTACTGCTGTTaGCTCTTCCATTCCAGACCT +
Preference number: 4 (lower is better)
Translates to: RNMDVMAEDVISTGMLGIAFYCC*LFHSRP
Trigger: AGGTCTGGAATGGAAGAGCCAACAGCAGTAGAAGGC...TATCCCCAACATCCCAGTGCTGATTACATCTTCAGCCATCACATCCATGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp AGACATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAATCCTGTGCCCCATTGTaGATTCCCCATCCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: RHEQEKSTSYSYKDPNLQSCAPL*IPHPAP
Trigger: TGGCGCTGGATGGGGAATCCACAATGGGGCACAGGA...TTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGAAAGAGTTTGTCCATTaGGTGAACTGCTTTGGCACA +
Preference number: 4 (lower is better)
Translates to: TFCYTVVVQLPKCLTPSLKEFVH*VNCFGT
Trigger: TGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT...CAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTAAGAAGCCTGGGACCTaGATTACTTCACAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: RPTSTTRTKSYATIINCTKKPGT*ITSQGP
Trigger: GGGACCCTGTGAAGTAATCCAGGTCCCAGGCTTCTT...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ATGGTAAAACTGATCAGTATGGACTCTGATTTCCCAGAAGAACTGCGGAGAGTAAAGAAGCCTGGGACCTaGATTACTTCACAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: MVKLISMDSDFPEELRRVKKPGT*ITSQGP
Trigger: GGGACCCTGTGAAGTAATCCAGGTCCCAGGCTTCTT...TACTCTCCGCAGTTCTTCTGGGAAATCAGAGTCCATACTGATCAGTTTTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGGAAATAGAAGAAGCCTaGGACCTGGATTACTTCACA +
Preference number: 4 (lower is better)
Translates to: TFCYTVVVQLPKCLTPSLEIEEA*DLDYFT
Trigger: TGTGAAGTAATCCAGGTCCCAGGCTTCTTCTATTTC...CAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ATGGTAAAACTGATCAGTATGGACTCTGATTTCCCAGAAGAACTGCGGAGAGTATGTAATCCCAGCTACTaGGGAGGCCAAGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: MVKLISMDSDFPEELRRVCNPSY*GGQGTR
Trigger: TCTTGTGCCTTGGCCTCCCCAGTAGCTGGGATTACA...TACTCTCCGCAGTTCTTCTGGGAAATCAGAGTCCATACTGATCAGTTTTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ATAAGAAGAATCGAGTGGGACTTCTGGGAAGTCTCCTTGAACAGGAAGGGTGTGTGTTTTCTCATTGTCTaGGCGGTAGATGATGATGGA +
Preference number: 4 (lower is better)
Translates to: IRRIEWDFWEVSLNRKGVCFLIV*AVDDDG
Trigger: TCCATCATCATCTACCGCTCAGACAATGAGAAAACA...CACACCCTTCCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp GGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCAGAAACATGGATGTTCCTCCTCTTTAGGCTaGTCTCCACCTTCTGATTCT +
Preference number: 4 (lower is better)
Translates to: GRVCASLPFPLFYQKHGCSSSLG*SPPSDS
Trigger: AGAATCAGAAGGTGGAGATCAGCCTAAAGAGGAGGA...ACATCCATGTTTCTGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp AAAGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTGCTTGTCTGCTCCATTCCTCCTCTTTAGGCTaGTCTCCACCTTCTGATTCT +
Preference number: 4 (lower is better)
Translates to: KEFVHWVNCFGTIACLLHSSSLG*SPPSDS
Trigger: AGAATCAGAAGGTGGAGATCAGCCTAAAGAGGAGGA...ATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp TCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCTCCCTTCCTCCTCTTTAGGCTaGTCTCCACCTTCTGATTCT +
Preference number: 4 (lower is better)
Translates to: SLSIILVDLVTPRFFILPSSSLG*SPPSDS
Trigger: AGAATCAGAAGGTGGAGATCAGCCTAAAGAGGAGGA...AGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAAATTCTGGTCCCAGTTAAGGTaGCGTAGCGGCTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: MNKKRAPAILIRTQISKFWSQLR*RSGCPE
Trigger: CTCTGGACAGCCGCTACGTCACCTTAACTGGGACCA...GAATTTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp AAACAAAACCCAAATAACCATTCTTCCTTTTTCTTGCCAATTAGCGTGAACCCATGGTCCCAGTTAAGGTaGCGTAGCGGCTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: KQNPNNHSSFFLPISVNPWSQLR*RSGCPE
Trigger: CTCTGGACAGCCGCTACGTCACCTTAACTGGGACCA...TGGGTTCACGCTAATTGGCAAGAAAAAGGAAGAATGGTTATTTGGGTTTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ACTCCATCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTTGGATGTCCACCATCTaGCCCTTTTTCTTCCCTCGT +
Preference number: 4 (lower is better)
Translates to: TPSLSIILVDLVTPRFFIWMSTI*PFFFPR
Trigger: ACGAGGGAAGAAAAAGGGTCAGATGGTGGACATCCA...AATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp TGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTCTTTCTCTGTCAATGTaGCATGGATGTCCACCATCT +
Preference number: 4 (lower is better)
Translates to: CYTVVVQLPKCLTPSLSILSLSM*HGCPPS
Trigger: AGATGGTGGACATCCATGTCACATTGACAGAGAAAG...AATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp TCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGATCAGTATGGACTCTaGTTTCCCAGAAGAACTGCG +
Preference number: 4 (lower is better)
Translates to: SLSIILVDLVTPRFFILPDQYGL*FPRRTA
Trigger: CGCAGTTCTTCTGGGAAATCAGAGTCCATACTGATC...AGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp GAAGTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTAAGTTTGTCCATTGGGTaGACTGCTTTGGCACAATTG +
Preference number: 4 (lower is better)
Translates to: EVSLNRKGVCFSALSSILSLSIG*TALAQL
Trigger: CAATTGTGCCAAAGCAGTTCACCCAATGGACAAACT...TAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp TGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTAGTTTGTCCATTGGGTaGACTGCTTTGGCACAATTG +
Preference number: 4 (lower is better)
Translates to: CYTVVVQLPKCLTPSLSISLSIG*TALAQL
Trigger: CAATTGTGCCAAAGCAGTTCACCCAATGGACAAACT...AATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ATGGTAAAACTGATCAGTATGGACTCTGATTTCCCAGAAGAACTGCGGAGAGTAAGCCTGGGCACATGGTaGAACCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: MVKLISMDSDFPEELRRVSLGTW*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCATGTGCCCAGGCT...TACTCTCCGCAGTTCTTCTGGGAAATCAGAGTCCATACTGATCAGTTTTACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATTTAGTCACATACTCCAGCCTGGGCACATGGTaGAACCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: IWLPRGSLFSLTHLVTYSSLGTW*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCATGTGCCCAGGCT...GGAGTATGTGACTAAATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp TGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTGTGAGGCAAAGATTCTaGCTTGCCTACCAAGATAAC +
Preference number: 4 (lower is better)
Translates to: CYTVVVQLPKCLTPSLSIVRQRF*LAYQDN
Trigger: GTTATCTTGGTAGGCAAGTCAGAATCTTTGCCTCAC...AATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp GGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCAGAAACATGGATGTGAGGGAGTAAAGCTCTaGGTGAGGTTTTGCCAAACA +
Preference number: 4 (lower is better)
Translates to: GRVCASLPFPLFYQKHGCEGVKL*VRFCQT
Trigger: TGTTTGGCAAAACCTCACTCAGAGCTTTACTCCCTC...ACATCCATGTTTCTGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp TGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTAAACTCAGAAAGGTCTaGGGGAGTAAAGCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: CYTVVVQLPKCLTPSLSIKLRKV*GSKALS
Trigger: ACTCAGAGCTTTACTCCCTCAGACCTTTCTGAGTTT...AATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp GGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCAGAAACATGGATGTCAAACTCCTCTGGTTTaGTTCATCGCAGCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: GRVCASLPFPLFYQKHGCQTPLV*FIAAVL
Trigger: GAGAACTGCTGCGATGAATCAAACCAGAGGAGTTTG...ACATCCATGTTTCTGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp AGACATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAATGCTTGTCTGCTCCATaGCCTCCTGGAACCCTCAAG +
Preference number: 4 (lower is better)
Translates to: RHEQEKSTSYSYKDPNLQCLSAP*PPGTLK
Trigger: CTTGAGGGTTCCAGGAGGGCATGGAGCAGACAAGCA...TTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCATGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp ATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATTTAGTCACATACTCCCTGCTTTGGCACAATTaGTTGTCTGCTCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: IWLPRGSLFSLTHLVTYSLLWHN*LSAPCP
Trigger: AGGGCATGGAGCAGACAAGCAATTGTGCCAAAGCAG...GGAGTATGTGACTAAATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp GTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCAGTCCATTGGGTGAACTaGTTTGGCACAATTGCTTGT +
Preference number: 4 (lower is better)
Translates to: VSLNRKGVCFSALSSILSVHWVN*FGTIAC
Trigger: ACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGAC...TGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp ACACAAATCTTTACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCAACAGGAAGGGTGTGTaGTTCTCTGCCCTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: TQIFTFCYTVVVQLPKCLNRKGV*FSALSS
Trigger: AGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTT...GAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGTAAAGATTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp GAGAGAGTTCCTCTGAAGGTGGAGCTCAGCACCATACATCAGGCAAATGTCCTGTTACAGAAGCTTAATTaGAAAGTACGTGAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: ERVPLKVELSTIHQANVLLQKLN*KVREVL
Trigger: TAGCACCTCACGTACTTTGCAATTAAGCTTCTGTAA...CAGGACATTTGCCTGATGTATGGTGCTGAGCTCCACCTTCAGAGGAACTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp ATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATTTAGTCACATACTCCAAGATGTCCCAAGGATaGATTCCACCTGGAGCCACA +
Preference number: 4 (lower is better)
Translates to: IWLPRGSLFSLTHLVTYSKMSQG*IPPGAT
Trigger: TGTGGCTCCAGGTGGAATGCATCCTTGGGACATCTT...GGAGTATGTGACTAAATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406027.2
ENST00000454545.5
CDS-3UTR CCA 90 bp ATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAAATTCTCCTGTGCCCCATTGTaGATTCCCCATCCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: MNKKRAPAILIRTQISKFSCAPL*IPHPAP
Trigger: TGGCGCTGGATGGGGAATCCACAATGGGGCACAGGA...GAATTTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATTTAGTCACATACTCCGGCCATGATGAGCACTaGATAGAAGAGAACGAGGCA +
Preference number: 4 (lower is better)
Translates to: IWLPRGSLFSLTHLVTYSGHDEH*IEENEA
Trigger: TGCCTCGTTCTCTTCTATCCAGTGCTCATCATGGCC...GGAGTATGTGACTAAATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ACACAAATCTTTACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCGGCCATGATGAGCACTaGATAGAAGAGAACGAGGCA +
Preference number: 4 (lower is better)
Translates to: TQIFTFCYTVVVQLPKCLGHDEH*IEENEA
Trigger: TGCCTCGTTCTCTTCTATCCAGTGCTCATCATGGCC...GAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGTAAAGATTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp TCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGAGGTTTCTACTTCTTaGATGGGGTCCTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: SLSIILVDLVTPRFFILPEVSTS*MGSLLE
Trigger: CTCCAACAAGGACCCCATCCAAGAAGTAGAAACCTC...AGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp CTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATGAGGGAGTAAGTTGTTaGGAGTTTAGACCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LLSWWIWLPRGSLFSLTHEGVSC*EFRPWR
Trigger: CCTCCACGGTCTAAACTCCCAACAACTTACTCCCTC...ATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTTATCTTGGTGGATTTaGTTACCCCGAGGTTCTTTA +
Preference number: 4 (lower is better)
Translates to: TFCYTVVVQLPKCLTPSLLSWWI*LPRGSL
Trigger: TAAAGAACCTCGGGGTAACCAAATCCACCAAGATAA...CAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp GAAGTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTACCCTGTCTATTATCTTaGTGGATTTGGTTACCCCGA +
Preference number: 4 (lower is better)
Translates to: EVSLNRKGVCFSALSSILPCLLS*WIWLPR
Trigger: TCGGGGTAACCAAATCCACCAAGATAATAGACAGGG...TAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ATAAGAAGAATCGAGTGGGACTTCTGGGAAGTCTCCTTGAACAGGAAGGGTGTGGAAATAGAAGAAGCCTaGGACCTGGATTACTTCACA +
Preference number: 4 (lower is better)
Translates to: IRRIEWDFWEVSLNRKGVEIEEA*DLDYFT
Trigger: TGTGAAGTAATCCAGGTCCCAGGCTTCTTCTATTTC...CACACCCTTCCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ACTCCATCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTATCGAGTGGGACTTCTaGGAAGTCTCCTTGAACAGG +
Preference number: 4 (lower is better)
Translates to: TPSLSIILVDLVTPRFFIIEWDF*EVSLNR
Trigger: CCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGAT...AATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp CTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATATCGAGTGGGACTTCTaGGAAGTCTCCTTGAACAGG +
Preference number: 4 (lower is better)
Translates to: LLSWWIWLPRGSLFSLTHIEWDF*EVSLNR
Trigger: CCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGAT...ATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp GTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCAATAAGAAGAATCGAGTaGGACTTCTGGGAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: VSLNRKGVCFSALSSILSIRRIE*DFWEVS
Trigger: GGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT...TGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp TGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTATAAGAAGAATCGAGTaGGACTTCTGGGAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: CYTVVVQLPKCLTPSLSIIRRIE*DFWEVS
Trigger: GGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT...AATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp AAAGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTGCTTGTCTGCTCCATGCTACTGATCGCTGTTaGAGGAAACTTTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: KEFVHWVNCFGTIACLLHATDRC*RKLWQM
Trigger: CATCTGCCAAAGTTTCCTCCAACAGCGATCAGTAGC...ATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp CTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCATCAGGCAAATGTCCTaGGCTCTCTGTGGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: LHHQDKELCYYYKLYSPVIRQMS*ALCGEH
Trigger: ATGCTCCCCACAGAGAGCCCAGGACATTTGCCTGAT...GACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
3UTR CAA 72 bp TGTCTCACTCCATCCCTGTCTATTATCTTGGTGGATTaGGTTACCCCGAGGTTCTTTATTCTCCCTGACACA +
Preference number: 4 (lower is better)
Translates to: CLTPSLSIILVD*VTPRFFILPDT
Trigger: TGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGTGAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ACACAAATCTTTACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCTCCTCCTCTTTAGGCTaGTCTCCACCTTCTGATTCT +
Preference number: 4 (lower is better)
Translates to: TQIFTFCYTVVVQLPKCLSSSLG*SPPSDS
Trigger: AGAATCAGAAGGTGGAGATCAGCCTAAAGAGGAGGA...GAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGTAAAGATTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp TCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCCTGGATGTCCACCATCTaGCCCTTTTTCTTCCCTCGT +
Preference number: 4 (lower is better)
Translates to: STTRTKSYATIINCTLLSWMSTI*PFFFPR
Trigger: ACGAGGGAAGAAAAAGGGTCAGATGGTGGACATCCA...GGACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp AGAAACATGGATGTGATGGCTGAAGATGTAATCAGCACTGGGATGTTGGGGATACTTTCTCTGTCAATGTaGCATGGATGTCCACCATCT +
Preference number: 4 (lower is better)
Translates to: RNMDVMAEDVISTGMLGILSLSM*HGCPPS
Trigger: AGATGGTGGACATCCATGTCACATTGACAGAGAAAG...TATCCCCAACATCCCAGTGCTGATTACATCTTCAGCCATCACATCCATGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp AAAGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTGCTTGTCTGCTCCATGTTGGAGAGAGTGCTTaGGATATTGTCGGATTCAAG +
Preference number: 4 (lower is better)
Translates to: KEFVHWVNCFGTIACLLHVGESA*DIVGFK
Trigger: CTTGAATCCGACAATATCTCAAGCACTCTCTCCAAC...ATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp AAAGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTGCTTGTCTGCTCCATAGTTTGTCCATTGGGTaGACTGCTTTGGCACAATTG +
Preference number: 4 (lower is better)
Translates to: KEFVHWVNCFGTIACLLHSLSIG*TALAQL
Trigger: CAATTGTGCCAAAGCAGTTCACCCAATGGACAAACT...ATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp AAAGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTGCTTGTCTGCTCCATGTGAGGCAAAGATTCTaGCTTGCCTACCAAGATAAC +
Preference number: 4 (lower is better)
Translates to: KEFVHWVNCFGTIACLLHVRQRF*LAYQDN
Trigger: GTTATCTTGGTAGGCAAGTCAGAATCTTTGCCTCAC...ATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp CTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATGAGGGAGTAAAGCTCTaGGTGAGGTTTTGCCAAACA +
Preference number: 4 (lower is better)
Translates to: LLSWWIWLPRGSLFSLTHEGVKL*VRFCQT
Trigger: TGTTTGGCAAAACCTCACTCAGAGCTTTACTCCCTC...ATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ACTCCATCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTGAGGGAGTAAAGCTCTaGGTGAGGTTTTGCCAAACA +
Preference number: 4 (lower is better)
Translates to: TPSLSIILVDLVTPRFFIEGVKL*VRFCQT
Trigger: TGTTTGGCAAAACCTCACTCAGAGCTTTACTCCCTC...AATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp AAAGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTGCTTGTCTGCTCCATCAATACGAGATCTTGTaGCAGAAGGTCCTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: KEFVHWVNCFGTIACLLHQYEIL*QKVLSS
Trigger: TGAGGAAAGGACCTTCTGGCACAAGATCTCGTATTG...ATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp AGAAACATGGATGTGATGGCTGAAGATGTAATCAGCACTGGGATGTTGGGGATACAATACGAGATCTTGTaGCAGAAGGTCCTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: RNMDVMAEDVISTGMLGIQYEIL*QKVLSS
Trigger: TGAGGAAAGGACCTTCTGGCACAAGATCTCGTATTG...TATCCCCAACATCCCAGTGCTGATTACATCTTCAGCCATCACATCCATGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp TGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTCCTTGTTGGAGAGAGTaGTTGAGATATTGTCGGATT +
Preference number: 4 (lower is better)
Translates to: CYTVVVQLPKCLTPSLSIPCWRE*LRYCRI
Trigger: AATCCGACAATATCTCAAGCACTCTCTCCAACAAGG...AATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp AGAAACATGGATGTGATGGCTGAAGATGTAATCAGCACTGGGATGTTGGGGATAGTCCATTGGGTGAACTaGTTTGGCACAATTGCTTGT +
Preference number: 4 (lower is better)
Translates to: RNMDVMAEDVISTGMLGIVHWVN*FGTIAC
Trigger: ACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGAC...TATCCCCAACATCCCAGTGCTGATTACATCTTCAGCCATCACATCCATGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp AAAGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTGCTTGTCTGCTCCATGTCCATTGGGTGAACTaGTTTGGCACAATTGCTTGT +
Preference number: 4 (lower is better)
Translates to: KEFVHWVNCFGTIACLLHVHWVN*FGTIAC
Trigger: ACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGAC...ATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp TCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGGGTGTGTGCTTCTCTaGCCTTTCCTCTATTTTATC +
Preference number: 4 (lower is better)
Translates to: SLSIILVDLVTPRFFILPGCVLL*PFLYFI
Trigger: GATAAAATAGAGGAAAGGGCAGAGAAGCACACACCC...AGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp CTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCGGCCATGATGAGCACTaGATAGAAGAGAACGAGGCA +
Preference number: 4 (lower is better)
Translates to: LHHQDKELCYYYKLYSPVGHDEH*IEENEA
Trigger: TGCCTCGTTCTCTTCTATCCAGTGCTCATCATGGCC...GACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ACTCCATCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTGGATGGGGTCCTTGTTaGAGAGAGTGCTTGAGATAT +
Preference number: 4 (lower is better)
Translates to: TPSLSIILVDLVTPRFFIGWGPC*RECLRY
Trigger: ATATCTCAAGCACTCTCTCCAACAAGGACCCCATCC...AATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp CAGGTAGACACAAGTTTCTCAGCACAGCAAAGATCATGTCTGTGGTTAAACTCAGGATGGGGTCCTTGTTaGAGAGAGTGCTTGAGATAT +
Preference number: 4 (lower is better)
Translates to: QVDTSFSAQQRSCLWLNSGWGPC*RECLRY
Trigger: ATATCTCAAGCACTCTCTCCAACAAGGACCCCATCC...TGAGTTTAACCACAGACATGATCTTTGCTGTGCTGAGAAACTTGTGTCTACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATTTAGTCACATACTCCGGATGGGGTCCTTGTTaGAGAGAGTGCTTGAGATAT +
Preference number: 4 (lower is better)
Translates to: IWLPRGSLFSLTHLVTYSGWGPC*RECLRY
Trigger: ATATCTCAAGCACTCTCTCCAACAAGGACCCCATCC...GGAGTATGTGACTAAATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTGAGGTTTCTACTTCTTaGATGGGGTCCTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: RPTSTTRTKSYATIINCTEVSTS*MGSLLE
Trigger: CTCCAACAAGGACCCCATCCAAGAAGTAGAAACCTC...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ATGGTAAAACTGATCAGTATGGACTCTGATTTCCCAGAAGAACTGCGGAGAGTAGAGGTTTCTACTTCTTaGATGGGGTCCTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: MVKLISMDSDFPEELRRVEVSTS*MGSLLE
Trigger: CTCCAACAAGGACCCCATCCAAGAAGTAGAAACCTC...TACTCTCCGCAGTTCTTCTGGGAAATCAGAGTCCATACTGATCAGTTTTACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp TCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCCGAGGGAGTAAGTTGTTaGGAGTTTAGACCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: STTRTKSYATIINCTLLSEGVSC*EFRPWR
Trigger: CCTCCACGGTCTAAACTCCCAACAACTTACTCCCTC...GGACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp CTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCATCGAGTGGGACTTCTaGGAAGTCTCCTTGAACAGG +
Preference number: 4 (lower is better)
Translates to: LHHQDKELCYYYKLYSPVIEWDF*EVSLNR
Trigger: CCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGAT...GACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp AAAGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTGCTTGTCTGCTCCATTGTTGGAGGAAACTTTaGCAGATGCAATTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: KEFVHWVNCFGTIACLLHCWRKL*QMQFLP
Trigger: AGGGAGGAATTGCATCTGCCAAAGTTTCCTCCAACA...ATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ACACAAATCTTTACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCGCTACTGATCGCTGTTaGAGGAAACTTTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: TQIFTFCYTVVVQLPKCLATDRC*RKLWQM
Trigger: CATCTGCCAAAGTTTCCTCCAACAGCGATCAGTAGC...GAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGTAAAGATTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp TTACAGAAGCTTAATTGCAAAGTACGTGAGGTGCTAATATCGATGTATAGCATAAGGATGCATTCCACCTaGAGCCACAGCATCGCCGAC +
Preference number: 4 (lower is better)
Translates to: LQKLNCKVREVLISMYSIRMHST*SHSIAD
Trigger: GTCGGCGATGCTGTGGCTCCAGGTGGAATGCATCCT...TATGCTATACATCGATATTAGCACCTCACGTACTTTGCAATTAAGCTTCTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406027.2
ENST00000454545.5
3UTR CAA 72 bp GTTTTGCCAAACAACAGAAGGCTAAATCTGGCTTCTTaGTACTTAGGGCTACTGATCGCTGTTGGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: VLPNNRRLNLAS*YLGLLIAVGGN
Trigger: GTTTCCTCCAACAGCGATCAGTAGCCCTAAGTACAAAGAAGCCAGATTTAGCCTTCTGTTGTTTGGCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp GAAGTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTAAGAGTTGGACTTGTTTaGGTAAACTCACAGTTCACA +
Preference number: 4 (lower is better)
Translates to: EVSLNRKGVCFSALSSILRVGLV*VNSQFT
Trigger: TGTGAACTGTGAGTTTACTCAAACAAGTCCAACTCT...TAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp CAGGTAGACACAAGTTTCTCAGCACAGCAAAGATCATGTCTGTGGTTAAACTCACTTCCATTCCAGACCTaGCGTCTACCTATGTCTTAT +
Preference number: 4 (lower is better)
Translates to: QVDTSFSAQQRSCLWLNSLPFQT*RLPMSY
Trigger: ATAAGACATAGGTAGACGTCAGGTCTGGAATGGAAG...TGAGTTTAACCACAGACATGATCTTTGCTGTGCTGAGAAACTTGTGTCTACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp CAGGTAGACACAAGTTTCTCAGCACAGCAAAGATCATGTCTGTGGTTAAACTCACTTTCTCTGTCAATGTaGCATGGATGTCCACCATCT +
Preference number: 4 (lower is better)
Translates to: QVDTSFSAQQRSCLWLNSLSLSM*HGCPPS
Trigger: AGATGGTGGACATCCATGTCACATTGACAGAGAAAG...TGAGTTTAACCACAGACATGATCTTTGCTGTGCTGAGAAACTTGTGTCTACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp CTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATCTTTCTCTGTCAATGTaGCATGGATGTCCACCATCT +
Preference number: 4 (lower is better)
Translates to: LLSWWIWLPRGSLFSLTHLSLSM*HGCPPS
Trigger: AGATGGTGGACATCCATGTCACATTGACAGAGAAAG...ATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp CAGGTAGACACAAGTTTCTCAGCACAGCAAAGATCATGTCTGTGGTTAAACTCAGTTGGAGAGAGTGCTTaGGATATTGTCGGATTCAAG +
Preference number: 4 (lower is better)
Translates to: QVDTSFSAQQRSCLWLNSVGESA*DIVGFK
Trigger: CTTGAATCCGACAATATCTCAAGCACTCTCTCCAAC...TGAGTTTAACCACAGACATGATCTTTGCTGTGCTGAGAAACTTGTGTCTACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp CTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCGATCAGTATGGACTCTaGTTTCCCAGAAGAACTGCG +
Preference number: 4 (lower is better)
Translates to: LHHQDKELCYYYKLYSPVDQYGL*FPRRTA
Trigger: CGCAGTTCTTCTGGGAAATCAGAGTCCATACTGATC...GACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ATGGTAAAACTGATCAGTATGGACTCTGATTTCCCAGAAGAACTGCGGAGAGTAAACCCAGTATTTAGCTaGGAATATAGCTACCCAGCC +
Preference number: 4 (lower is better)
Translates to: MVKLISMDSDFPEELRRVNPVFS*EYSYPA
Trigger: GGCTGGGTAGCTATATTCTCAGCTAAATACTGGGTT...TACTCTCCGCAGTTCTTCTGGGAAATCAGAGTCCATACTGATCAGTTTTACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAAATTCGGCACAAGAATTGCTTaGACCCAGGAGGCGAAGGTT +
Preference number: 4 (lower is better)
Translates to: MNKKRAPAILIRTQISKFGTRIA*TQEAKV
Trigger: AACCTTCGCCTCCTGGGTTCAAGCAATTCTTGTGCC...GAATTTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp AAACAAAACCCAAATAACCATTCTTCCTTTTTCTTGCCAATTAGCGTGAACCCAGGCACAAGAATTGCTTaGACCCAGGAGGCGAAGGTT +
Preference number: 4 (lower is better)
Translates to: KQNPNNHSSFFLPISVNPGTRIA*TQEAKV
Trigger: AACCTTCGCCTCCTGGGTTCAAGCAATTCTTGTGCC...TGGGTTCACGCTAATTGGCAAGAAAAAGGAAGAATGGTTATTTGGGTTTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ACTCCATCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTGTGAGGCAAAGATTCTaGCTTGCCTACCAAGATAAC +
Preference number: 4 (lower is better)
Translates to: TPSLSIILVDLVTPRFFIVRQRF*LAYQDN
Trigger: GTTATCTTGGTAGGCAAGTCAGAATCTTTGCCTCAC...AATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ACACAAATCTTTACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCAAACTCAGAAAGGTCTaGGGGAGTAAAGCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: TQIFTFCYTVVVQLPKCLKLRKV*GSKALS
Trigger: ACTCAGAGCTTTACTCCCTCAGACCTTTCTGAGTTT...GAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGTAAAGATTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp CTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCCAAACTCCTCTGGTTTaGTTCATCGCAGCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: LHHQDKELCYYYKLYSPVQTPLV*FIAAVL
Trigger: GAGAACTGCTGCGATGAATCAAACCAGAGGAGTTTG...GACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAAATTCAAGAGAGAGTTCCTCTaGAGGTGGAGCTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: MNKKRAPAILIRTQISKFKREFL*RWSSAP
Trigger: TGGTGCTGAGCTCCACCTTCAGAGGAACTCTCTCTT...GAATTTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp AAACAAAACCCAAATAACCATTCTTCCTTTTTCTTGCCAATTAGCGTGAACCCAGACCTGGCCTTCTACTaGTGTTGGCTCTTCCATTCC +
Preference number: 4 (lower is better)
Translates to: KQNPNNHSSFFLPISVNPDLAFY*CWLFHS
Trigger: GGAATGGAAGAGCCAACAGCAGTAGAAGGCCAGGTC...TGGGTTCACGCTAATTGGCAAGAAAAAGGAAGAATGGTTATTTGGGTTTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp ACTCCATCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCAATACGAGATCTTGTaGCAGAAGGTCCTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: TPSLSIILVDLVTPRFFIQYEIL*QKVLSS
Trigger: TGAGGAAAGGACCTTCTGGCACAAGATCTCGTATTG...AATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCAATACGAGATCTTGTaGCAGAAGGTCCTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: RPTSTTRTKSYATIINCTQYEIL*QKVLSS
Trigger: TGAGGAAAGGACCTTCTGGCACAAGATCTCGTATTG...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp AGAAACATGGATGTGATGGCTGAAGATGTAATCAGCACTGGGATGTTGGGGATACAAATCTTTACCTTCTaGTACACTGTGGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: RNMDVMAEDVISTGMLGIQIFTF*YTVVVQ
Trigger: CTGGACTACCACAGTGTAGCAGAAGGTAAAGATTTG...TATCCCCAACATCCCAGTGCTGATTACATCTTCAGCCATCACATCCATGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp AAAGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTGCTTGTCTGCTCCATCAAATCTTTACCTTCTaGTACACTGTGGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: KEFVHWVNCFGTIACLLHQIFTF*YTVVVQ
Trigger: CTGGACTACCACAGTGTAGCAGAAGGTAAAGATTTG...ATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp ATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATTTAGTCACATACTCCGGGTGTGTGCTTCTCTaGCCTTTCCTCTATTTTATC +
Preference number: 4 (lower is better)
Translates to: IWLPRGSLFSLTHLVTYSGCVLL*PFLYFI
Trigger: GATAAAATAGAGGAAAGGGCAGAGAAGCACACACCC...GGAGTATGTGACTAAATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp ATAAGAAGAATCGAGTGGGACTTCTGGGAAGTCTCCTTGAACAGGAAGGGTGTGTTACAGAAGCTTAATTaGAAAGTACGTGAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: IRRIEWDFWEVSLNRKGVLQKLN*KVREVL
Trigger: TAGCACCTCACGTACTTTGCAATTAAGCTTCTGTAA...CACACCCTTCCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTGAACTTCTTCCTAGATaGGGCTATGCAAAGATGTCC +
Preference number: 4 (lower is better)
Translates to: RPTSTTRTKSYATIINCTELLPR*GYAKMS
Trigger: GGACATCTTTGCATAGCCCCATCTAGGAAGAAGTTC...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATTTAGTCACATACTCCTTTCTACTTCTTGGATaGGGTCCTTGTTGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: IWLPRGSLFSLTHLVTYSFLLLG*GPCWRE
Trigger: CTCTCTCCAACAAGGACCCCATCCAAGAAGTAGAAA...GGAGTATGTGACTAAATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ATGGTAAAACTGATCAGTATGGACTCTGATTTCCCAGAAGAACTGCGGAGAGTATTTCTACTTCTTGGATaGGGTCCTTGTTGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: MVKLISMDSDFPEELRRVFLLLG*GPCWRE
Trigger: CTCTCTCCAACAAGGACCCCATCCAAGAAGTAGAAA...TACTCTCCGCAGTTCTTCTGGGAAATCAGAGTCCATACTGATCAGTTTTACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ACACAAATCTTTACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCCCCTGTCTATTATCTTaGTGGATTTGGTTACCCCGA +
Preference number: 4 (lower is better)
Translates to: TQIFTFCYTVVVQLPKCLPCLLS*WIWLPR
Trigger: TCGGGGTAACCAAATCCACCAAGATAATAGACAGGG...GAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGTAAAGATTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATTTAGTCACATACTCCCCCTGTCTATTATCTTaGTGGATTTGGTTACCCCGA +
Preference number: 4 (lower is better)
Translates to: IWLPRGSLFSLTHLVTYSPCLLS*WIWLPR
Trigger: TCGGGGTAACCAAATCCACCAAGATAATAGACAGGG...GGAGTATGTGACTAAATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp GGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCAGAAACATGGATGTAGAGTTGGACTTGTTTaGGTAAACTCACAGTTCACA +
Preference number: 4 (lower is better)
Translates to: GRVCASLPFPLFYQKHGCRVGLV*VNSQFT
Trigger: TGTGAACTGTGAGTTTACTCAAACAAGTCCAACTCT...ACATCCATGTTTCTGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ATCTTTACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCAAGAGTTGGACTTGTTTaGGTAAACTCACAGTTCACA +
Preference number: 4 (lower is better)
Translates to: IFTFCYTVVVQLPKCLTPRVGLV*VNSQFT
Trigger: TGTGAACTGTGAGTTTACTCAAACAAGTCCAACTCT...TGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGTAAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ACACAAATCTTTACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCTGTTTTCTCATTGTCTaGGCGGTAGATGATGATGGA +
Preference number: 4 (lower is better)
Translates to: TQIFTFCYTVVVQLPKCLCFLIV*AVDDDG
Trigger: TCCATCATCATCTACCGCTCAGACAATGAGAAAACA...GAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGTAAAGATTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTTGTTTTCTCATTGTCTaGGCGGTAGATGATGATGGA +
Preference number: 4 (lower is better)
Translates to: RPTSTTRTKSYATIINCTCFLIV*AVDDDG
Trigger: TCCATCATCATCTACCGCTCAGACAATGAGAAAACA...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp AAACAAAACCCAAATAACCATTCTTCCTTTTTCTTGCCAATTAGCGTGAACCCATGGATGTCCACCATCTaGCCCTTTTTCTTCCCTCGT +
Preference number: 4 (lower is better)
Translates to: KQNPNNHSSFFLPISVNPWMSTI*PFFFPR
Trigger: ACGAGGGAAGAAAAAGGGTCAGATGGTGGACATCCA...TGGGTTCACGCTAATTGGCAAGAAAAAGGAAGAATGGTTATTTGGGTTTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp TCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCCAACCCAGTATTTAGCTaGGAATATAGCTACCCAGCC +
Preference number: 4 (lower is better)
Translates to: STTRTKSYATIINCTLLSNPVFS*EYSYPA
Trigger: GGCTGGGTAGCTATATTCTCAGCTAAATACTGGGTT...GGACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp AAACAAAACCCAAATAACCATTCTTCCTTTTTCTTGCCAATTAGCGTGAACCCAAGCCTGGGCACATGGTaGAACCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: KQNPNNHSSFFLPISVNPSLGTW*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCATGTGCCCAGGCT...TGGGTTCACGCTAATTGGCAAGAAAAAGGAAGAATGGTTATTTGGGTTTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp TGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTGCAGTTTGGGGGTTCTaGATGTATTTAAATGATCAT +
Preference number: 4 (lower is better)
Translates to: CYTVVVQLPKCLTPSLSIAVWGF*MYLNDH
Trigger: ATGATCATTTAAATACATTCAGAACCCCCAAACTGC...AATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp GAAGTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTAGCAGTTTGGGGGTTCTaGATGTATTTAAATGATCAT +
Preference number: 4 (lower is better)
Translates to: EVSLNRKGVCFSALSSILAVWGF*MYLNDH
Trigger: ATGATCATTTAAATACATTCAGAACCCCCAAACTGC...TAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp TTACAGAAGCTTAATTGCAAAGTACGTGAGGTGCTAATATCGATGTATAGCATAAAGAGAGAGTTCCTCTaGAGGTGGAGCTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: LQKLNCKVREVLISMYSIKREFL*RWSSAP
Trigger: TGGTGCTGAGCTCCACCTTCAGAGGAACTCTCTCTT...TATGCTATACATCGATATTAGCACCTCACGTACTTTGCAATTAAGCTTCTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCCTTGTTGGAGAGAGTaGTTGAGATATTGTCGGATT +
Preference number: 4 (lower is better)
Translates to: RPTSTTRTKSYATIINCTPCWRE*LRYCRI
Trigger: AATCCGACAATATCTCAAGCACTCTCTCCAACAAGG...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp TCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCTCCCTCCTCCAGACTTCTTCTaGACAAGAAAGAAATACACT +
Preference number: 4 (lower is better)
Translates to: SLSIILVDLVTPRFFILPPPDFF*TRKKYT
Trigger: AGTGTATTTCTTTCTTGTGCAGAAGAAGTCTGGAGG...AGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp GGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCAGAAACATGGATGTCCTCCAGACTTCTTCTaGACAAGAAAGAAATACACT +
Preference number: 4 (lower is better)
Translates to: GRVCASLPFPLFYQKHGCPPDFF*TRKKYT
Trigger: AGTGTATTTCTTTCTTGTGCAGAAGAAGTCTGGAGG...ACATCCATGTTTCTGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp CTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCGGGTGTGTGCTTCTCTaGCCTTTCCTCTATTTTATC +
Preference number: 4 (lower is better)
Translates to: LHHQDKELCYYYKLYSPVGCVLL*PFLYFI
Trigger: GATAAAATAGAGGAAAGGGCAGAGAAGCACACACCC...GACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp AAACAAAACCCAAATAACCATTCTTCCTTTTTCTTGCCAATTAGCGTGAACCCAGCCTTCTACTGCTGTTaGCTCTTCCATTCCAGACCT +
Preference number: 4 (lower is better)
Translates to: KQNPNNHSSFFLPISVNPAFYCC*LFHSRP
Trigger: AGGTCTGGAATGGAAGAGCCAACAGCAGTAGAAGGC...TGGGTTCACGCTAATTGGCAAGAAAAAGGAAGAATGGTTATTTGGGTTTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp CTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCTTTCTACTTCTTGGATaGGGTCCTTGTTGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LHHQDKELCYYYKLYSPVFLLLG*GPCWRE
Trigger: CTCTCTCCAACAAGGACCCCATCCAAGAAGTAGAAA...GACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp TCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCCTGGGAGTTTAGACCGTaGAGGTTTCTACTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: STTRTKSYATIINCTLLSWEFRP*RFLLLG
Trigger: TCCAAGAAGTAGAAACCTCCACGGTCTAAACTCCCA...GGACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTAAAGAGTTTGTCCATTaGGTGAACTGCTTTGGCACA +
Preference number: 4 (lower is better)
Translates to: RPTSTTRTKSYATIINCTKEFVH*VNCFGT
Trigger: TGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp AAAGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTGCTTGTCTGCTCCATTTATCTTGGTGGATTTaGTTACCCCGAGGTTCTTTA +
Preference number: 4 (lower is better)
Translates to: KEFVHWVNCFGTIACLLHLSWWI*LPRGSL
Trigger: TAAAGAACCTCGGGGTAACCAAATCCACCAAGATAA...ATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ATGGTAAAACTGATCAGTATGGACTCTGATTTCCCAGAAGAACTGCGGAGAGTATGTCTATTATCTTGGTaGATTTGGTTACCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: MVKLISMDSDFPEELRRVCLLSW*IWLPRG
Trigger: ACCTCGGGGTAACCAAATCCACCAAGATAATAGACA...TACTCTCCGCAGTTCTTCTGGGAAATCAGAGTCCATACTGATCAGTTTTACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ATGGTAAAACTGATCAGTATGGACTCTGATTTCCCAGAAGAACTGCGGAGAGTAGAAATAGAAGAAGCCTaGGACCTGGATTACTTCACA +
Preference number: 4 (lower is better)
Translates to: MVKLISMDSDFPEELRRVEIEEA*DLDYFT
Trigger: TGTGAAGTAATCCAGGTCCCAGGCTTCTTCTATTTC...TACTCTCCGCAGTTCTTCTGGGAAATCAGAGTCCATACTGATCAGTTTTACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp TCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCCATAAGAAGAATCGAGTaGGACTTCTGGGAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: STTRTKSYATIINCTLLSIRRIE*DFWEVS
Trigger: GGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT...GGACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp CTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCATAAGAAGAATCGAGTaGGACTTCTGGGAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: LHHQDKELCYYYKLYSPVIRRIE*DFWEVS
Trigger: GGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT...GACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp AGACATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAAGTTGGAGAGAGTGCTTaGGATATTGTCGGATTCAAG +
Preference number: 4 (lower is better)
Translates to: RHEQEKSTSYSYKDPNLQVGESA*DIVGFK
Trigger: CTTGAATCCGACAATATCTCAAGCACTCTCTCCAAC...TTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp CTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCCCTTGTTGGAGAGAGTaGTTGAGATATTGTCGGATT +
Preference number: 4 (lower is better)
Translates to: LHHQDKELCYYYKLYSPVPCWRE*LRYCRI
Trigger: AATCCGACAATATCTCAAGCACTCTCTCCAACAAGG...GACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp ACTCCATCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCCTCCAGACTTCTTCTaGACAAGAAAGAAATACACT +
Preference number: 4 (lower is better)
Translates to: TPSLSIILVDLVTPRFFIPPDFF*TRKKYT
Trigger: AGTGTATTTCTTTCTTGTGCAGAAGAAGTCTGGAGG...AATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp TTACAGAAGCTTAATTGCAAAGTACGTGAGGTGCTAATATCGATGTATAGCATAGCCTTCTACTGCTGTTaGCTCTTCCATTCCAGACCT +
Preference number: 4 (lower is better)
Translates to: LQKLNCKVREVLISMYSIAFYCC*LFHSRP
Trigger: AGGTCTGGAATGGAAGAGCCAACAGCAGTAGAAGGC...TATGCTATACATCGATATTAGCACCTCACGTACTTTGCAATTAAGCTTCTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp CTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCAAAGAGTTTGTCCATTaGGTGAACTGCTTTGGCACA +
Preference number: 4 (lower is better)
Translates to: LHHQDKELCYYYKLYSPVKEFVH*VNCFGT
Trigger: TGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT...GACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ACTCCATCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTTTATCTTGGTGGATTTaGTTACCCCGAGGTTCTTTA +
Preference number: 4 (lower is better)
Translates to: TPSLSIILVDLVTPRFFILSWWI*LPRGSL
Trigger: TAAAGAACCTCGGGGTAACCAAATCCACCAAGATAA...AATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp TCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCCGAAATAGAAGAAGCCTaGGACCTGGATTACTTCACA +
Preference number: 4 (lower is better)
Translates to: STTRTKSYATIINCTLLSEIEEA*DLDYFT
Trigger: TGTGAAGTAATCCAGGTCCCAGGCTTCTTCTATTTC...GGACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTTTCCACCCTCCCCAATaGCATCGAAATTTAAAGAAA +
Preference number: 4 (lower is better)
Translates to: RPTSTTRTKSYATIINCTFHPPQ*HRNLKK
Trigger: TTTCTTTAAATTTCGATGCCATTGGGGAGGGTGGAA...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406027.2
CDS-3UTR TCA 90 bp AGACATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAAGCTGGAATTTTAAGATaGTATATAGGCTACTGGGGC +
Preference number: 4 (lower is better)
Translates to: RHEQEKSTSYSYKDPNLQAGILR*YIGYWG
Trigger: GCCCCAGTAGCCTATATATCATCTTAAAATTCCAGC...TTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ACTCCATCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTGCAGTTTGGGGGTTCTaGATGTATTTAAATGATCAT +
Preference number: 4 (lower is better)
Translates to: TPSLSIILVDLVTPRFFIAVWGF*MYLNDH
Trigger: ATGATCATTTAAATACATTCAGAACCCCCAAACTGC...AATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ATGGTAAAACTGATCAGTATGGACTCTGATTTCCCAGAAGAACTGCGGAGAGTAGCAGTTTGGGGGTTCTaGATGTATTTAAATGATCAT +
Preference number: 4 (lower is better)
Translates to: MVKLISMDSDFPEELRRVAVWGF*MYLNDH
Trigger: ATGATCATTTAAATACATTCAGAACCCCCAAACTGC...TACTCTCCGCAGTTCTTCTGGGAAATCAGAGTCCATACTGATCAGTTTTACCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp AAACAAAACCCAAATAACCATTCTTCCTTTTTCTTGCCAATTAGCGTGAACCCAGGGTGTGTGCTTCTCTaGCCTTTCCTCTATTTTATC +
Preference number: 4 (lower is better)
Translates to: KQNPNNHSSFFLPISVNPGCVLL*PFLYFI
Trigger: GATAAAATAGAGGAAAGGGCAGAGAAGCACACACCC...TGGGTTCACGCTAATTGGCAAGAAAAAGGAAGAATGGTTATTTGGGTTTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp ATGGTAAAACTGATCAGTATGGACTCTGATTTCCCAGAAGAACTGCGGAGAGTATTACAGAAGCTTAATTaGAAAGTACGTGAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: MVKLISMDSDFPEELRRVLQKLN*KVREVL
Trigger: TAGCACCTCACGTACTTTGCAATTAAGCTTCTGTAA...TACTCTCCGCAGTTCTTCTGGGAAATCAGAGTCCATACTGATCAGTTTTACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp AAACAAAACCCAAATAACCATTCTTCCTTTTTCTTGCCAATTAGCGTGAACCCATTTCTACTTCTTGGATaGGGTCCTTGTTGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: KQNPNNHSSFFLPISVNPFLLLG*GPCWRE
Trigger: CTCTCTCCAACAAGGACCCCATCCAAGAAGTAGAAA...TGGGTTCACGCTAATTGGCAAGAAAAAGGAAGAATGGTTATTTGGGTTTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAAATTCCCCTGTCTATTATCTTaGTGGATTTGGTTACCCCGA +
Preference number: 4 (lower is better)
Translates to: MNKKRAPAILIRTQISKFPCLLS*WIWLPR
Trigger: TCGGGGTAACCAAATCCACCAAGATAATAGACAGGG...GAATTTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp AAACAAAACCCAAATAACCATTCTTCCTTTTTCTTGCCAATTAGCGTGAACCCATGTTGGAGGAAACTTTaGCAGATGCAATTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: KQNPNNHSSFFLPISVNPCWRKL*QMQFLP
Trigger: AGGGAGGAATTGCATCTGCCAAAGTTTCCTCCAACA...TGGGTTCACGCTAATTGGCAAGAAAAAGGAAGAATGGTTATTTGGGTTTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp ATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATTTAGTCACATACTCCCAAAGATCATGTCTGTaGTTAAACTCAGAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: IWLPRGSLFSLTHLVTYSQRSCL*LNSERS
Trigger: AGACCTTTCTGAGTTTAACCACAGACATGATCTTTG...GGAGTATGTGACTAAATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
3UTR CAA 72 bp TTGATTCATCGCAGCAGTTCTCTCAACAGCTTTGTTTaGAGACATGAACAAGAAAAGAGCACCAGCTATTCT +
Preference number: 4 (lower is better)
Translates to: LIHRSSSLNSFV*RHEQEKSTSYS
Trigger: AGAATAGCTGGTGCTCTTTTCTTGTTCATGTCTCAAAACAAAGCTGTTGAGAGAACTGCTGCGATGAATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR TCA 90 bp ATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAAATTCAGAGTTGGACTTGTTTaGGTAAACTCACAGTTCACA +
Preference number: 4 (lower is better)
Translates to: MNKKRAPAILIRTQISKFRVGLV*VNSQFT
Trigger: TGTGAACTGTGAGTTTACTCAAACAAGTCCAACTCT...GAATTTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR GCA 90 bp AGACATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAATTACAGAAGCTTAATTaGAAAGTACGTGAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: RHEQEKSTSYSYKDPNLQLQKLN*KVREVL
Trigger: TAGCACCTCACGTACTTTGCAATTAAGCTTCTGTAA...TTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCATGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp AAACAAAACCCAAATAACCATTCTTCCTTTTTCTTGCCAATTAGCGTGAACCCATTATCTTGGTGGATTTaGTTACCCCGAGGTTCTTTA +
Preference number: 4 (lower is better)
Translates to: KQNPNNHSSFFLPISVNPLSWWI*LPRGSL
Trigger: TAAAGAACCTCGGGGTAACCAAATCCACCAAGATAA...TGGGTTCACGCTAATTGGCAAGAAAAAGGAAGAATGGTTATTTGGGTTTTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CCA 90 bp AAACAAAACCCAAATAACCATTCTTCCTTTTTCTTGCCAATTAGCGTGAACCCACAAAGATCATGTCTGTaGTTAAACTCAGAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: KQNPNNHSSFFLPISVNPQRSCL*LNSERS
Trigger: AGACCTTTCTGAGTTTAACCACAGACATGATCTTTG...TGGGTTCACGCTAATTGGCAAGAAAAAGGAAGAATGGTTATTTGGGTTTTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS GCA 90 bp TTCCAGCTGCACCACACCTGCCCAGGGACCGACGCTGGCGGAGGTTaGGGACAGCCGGCGGGGAGCGGTTCTGCTCCGGGAGGATGCGGC +
Preference number: 5 (lower is better)
Translates to: FQLHHTCPGTDAGGG*GQPAGSGSAPGGCG
Trigger: GCCGCATCCTCCCGGAGCAGAACCGCTCCCCGCCGGCTGTCCGCAACCTCCGCCAGCGTCGGTCCCTGGGCAGGTGTGGTGCAGCTGGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454545.5
CDS GCA 90 bp CCAAGGATGCATTCCACCTGCCCAGGGACCGACGCTGGCGGAGGTTaGGGACAGCCGGCGGGGAGCGGTTCTGCTCCGGGAGGATGCGGC +
Preference number: 5 (lower is better)
Translates to: PRMHSTCPGTDAGGG*GQPAGSGSAPGGCG
Trigger: GCCGCATCCTCCCGGAGCAGAACCGCTCCCCGCCGGCTGTCCGCAACCTCCGCCAGCGTCGGTCCCTGGGCAGGTGGAATGCATCCTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433112.5
CDS GCA 90 bp AAGGATGCATTCCACACCTGCCCAGGGACCGACGCTGGCGGAGGTTaGGGACAGCCGGCGGGGAGCGGTTCTGCTCCGGGAGGATGCGGC +
Preference number: 5 (lower is better)
Translates to: KDAFHTCPGTDAGGG*GQPAGSGSAPGGCG
Trigger: GCCGCATCCTCCCGGAGCAGAACCGCTCCCCGCCGGCTGTCCGCAACCTCCGCCAGCGTCGGTCCCTGGGCAGGTGTGGAATGCATCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295658.8
CDS CCA 90 bp GCCTTTCTTTTTCCAGCTGCACCACACCTGCCCAGGGACCGACGCTaGCGGAGGTTGCGGACAGCCGGCGGGGAGCGGTTCTGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: AFLFPAAPHLPRDRR*RRLRTAGGERFCSG
Trigger: CCCGGAGCAGAACCGCTCCCCGCCGGCTGTCCGCAACCTCCGCCAGCGTCGGTCCCTGGGCAGGTGTGGTGCAGCTGGAAAAAGAAAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454545.5
CDS GCA 90 bp CCAGCCACAGAAGCCTTTCTCCATGTCCCGGGCAGCTTGCCACCATaGTTCCCAGGACCACGAGAGCTGGACCACAGCAGCGTAGAGGCC +
Preference number: 5 (lower is better)
Translates to: PATEAFLHVPGSLPP*FPGPRELDHSSVEA
Trigger: GGCCTCTACGCTGCTGTGGTCCAGCTCTCGTGGTCCTGGGAAGCATGGTGGCAAGCTGCCCGGGACATGGAGAAAGGCTTCTGTGGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS GCA 90 bp CTGCAGAGCCAGCCACAGAAGCCTTTCTCCATGTCCCGGGCAGCTTaGCACCATGCTTCCCAGGACCACGAGAGCTGGACCACAGCAGCG +
Preference number: 5 (lower is better)
Translates to: LQSQPQKPFSMSRAA*HHASQDHESWTTAA
Trigger: CGCTGCTGTGGTCCAGCTCTCGTGGTCCTGGGAAGCATGGTGGCAAGCTGCCCGGGACATGGAGAAAGGCTTCTGTGGCTGGCTCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS GCA 90 bp TGGCATCGAAATTTAAAGAAACGAACGAGCAGTCTCACCCACACCTaGCCAGGGACCGACGCTGGCGGAGGTTGCGGACAGCCGGCGGGG +
Preference number: 5 (lower is better)
Translates to: WHRNLKKRTSSLTHT*PGTDAGGGCGQPAG
Trigger: CCCCGCCGGCTGTCCGCAACCTCCGCCAGCGTCGGTCCCTGGGCAGGTGTGGGTGAGACTGCTCGTTCGTTTCTTTAAATTTCGATGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406027.2
CDS CCA 90 bp ATCAGCGTCCAGAGGACCACATGGGGCCCACGGTCAGCTCCCATCTaGCAGGCCATTCTTCCTTCAGGCGTCGTTTCCCTTGATGACTCT +
Preference number: 5 (lower is better)
Translates to: ISVQRTTWGPRSAPI*QAILPSGVVSLDDS
Trigger: AGAGTCATCAAGGGAAACGACGCCTGAAGGAAGAATGGCCTGCCAGATGGGAGCTGACCGTGGGCCCCATGTGGTCCTCTGGACGCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS CCA 90 bp AGGATGAAAACCACAGGCAGGCAGATCAGCGTCCAGAGGACCACATaGGGCCCACGGTCAGCTCCCATCTGGCAGGCCATTCTTCCTTCA +
Preference number: 5 (lower is better)
Translates to: RMKTTGRQISVQRTT*GPRSAPIWQAILPS
Trigger: TGAAGGAAGAATGGCCTGCCAGATGGGAGCTGACCGTGGGCCCCATGTGGTCCTCTGGACGCTGATCTGCCTGCCTGTGGTTTTCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS GCA 90 bp ACTCCACAATGCTGTAGGGAGAACAGTCCTCCAGACCCAGCTTGCTaGAGAGCCAGCCACAGAAGCCTTTCTCCATGTCCCGGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: TPQCCRENSPPDPAC*RASHRSLSPCPGQL
Trigger: AAGCTGCCCGGGACATGGAGAAAGGCTTCTGTGGCTGGCTCTGCAGCAAGCTGGGTCTGGAGGACTGTTCTCCCTACAGCATTGTGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS GCA 90 bp GAGAGAGCCCTGGTGGGGGCTTGGAAGCTGGACCTGGCCTTCTACTaGTGTTGGCTCTTCCATTCCAGACCTGACGTCTACCTATGTCTT +
Preference number: 5 (lower is better)
Translates to: ERALVGAWKLDLAFY*CWLFHSRPDVYLCL
Trigger: AAGACATAGGTAGACGTCAGGTCTGGAATGGAAGAGCCAACAGCAGTAGAAGGCCAGGTCCAGCTTCCAAGCCCCCACCAGGGCTCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000433112.5
ENST00000437356.7
ENST00000454545.5
ENST00000455479.5
CDS-3UTR CAA 90 bp GAGAGAGTTCCTCTGAAGGTGGAGCTCAGCACCATACATCAGGCAAATGTCCTGCATGTCCCGGGCAGCTaGCCACCATGCTTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: ERVPLKVELSTIHQANVLHVPGS*PPCFPG
Trigger: TCCTGGGAAGCATGGTGGCAAGCTGCCCGGGACATG...CAGGACATTTGCCTGATGTATGGTGCTGAGCTCCACCTTCAGAGGAACTCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGCATGTCCCGGGCAGCTaGCCACCATGCTTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: TFCYTVVVQLPKCLTPSLHVPGS*PPCFPG
Trigger: TCCTGGGAAGCATGGTGGCAAGCTGCCCGGGACATG...CAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS GCA 90 bp ATGATGATGGATTCTGGGCGTGACTCTTTCCTCTTCTTTTTCCTGTaGCCCATTGTGGATTCCCCATCCAGCGCCAGGGCAGCAGCCACA +
Preference number: 5 (lower is better)
Translates to: MMMDSGRDSFLFFFL*PIVDSPSSARAAAT
Trigger: TGTGGCTGCTGCCCTGGCGCTGGATGGGGAATCCACAATGGGGCACAGGAAAAAGAAGAGGAAAGAGTCACGCCCAGAATCCATCATCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000433112.5
ENST00000437356.7
ENST00000454545.5
ENST00000455479.5
CDS CCA 90 bp GCCCTGGTGGGGGCTTGGAAGCTGGACCTGGCCTTCTACTGCTGTTaGCTCTTCCATTCCAGACCTGACGTCTACCTATGTCTTATAAAG +
Preference number: 5 (lower is better)
Translates to: ALVGAWKLDLAFYCC*LFHSRPDVYLCLIK
Trigger: CTTTATAAGACATAGGTAGACGTCAGGTCTGGAATGGAAGAGCCAACAGCAGTAGAAGGCCAGGTCCAGCTTCCAAGCCCCCACCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000433112.5
ENST00000437356.7
ENST00000454545.5
ENST00000455479.5
CDS CCA 90 bp CTACTGGGGCCAGAGGAGGGAGTAAGTTGTTGGGAGTTTAGACCGTaGAGGTTTCTACTTCTTGGATGGGGTCCTTGTTGGAGAGAGTGC +
Preference number: 5 (lower is better)
Translates to: LLGPEEGVSCWEFRP*RFLLLGWGPCWREC
Trigger: GCACTCTCTCCAACAAGGACCCCATCCAAGAAGTAGAAACCTCCACGGTCTAAACTCCCAACAACTTACTCCCTCCTCTGGCCCCAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS GCA 90 bp TGGAGAGAGTGCTTGAGATATTGTCGGATTCAAGCAACTCCACAATaGTGTAGGGAGAACAGTCCTCCAGACCCAGCTTGCTGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: WRECLRYCRIQATPQ*CRENSPPDPACCRA
Trigger: GGCTCTGCAGCAAGCTGGGTCTGGAGGACTGTTCTCCCTACAGCATTGTGGAGTTGCTTGAATCCGACAATATCTCAAGCACTCTCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp AGAAACATGGATGTGATGGCTGAAGATGTAATCAGCACTGGGATGTTGGGGATACATGTCCCGGGCAGCTaGCCACCATGCTTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: RNMDVMAEDVISTGMLGIHVPGS*PPCFPG
Trigger: TCCTGGGAAGCATGGTGGCAAGCTGCCCGGGACATG...TATCCCCAACATCCCAGTGCTGATTACATCTTCAGCCATCACATCCATGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp AAAGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTGCTTGTCTGCTCCATCATGTCCCGGGCAGCTaGCCACCATGCTTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: KEFVHWVNCFGTIACLLHHVPGS*PPCFPG
Trigger: TCCTGGGAAGCATGGTGGCAAGCTGCCCGGGACATG...ATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp CAGGCACCAGTAACACTTCCAGGCTCCCAAAACGACACACAGCAGAGTTCCATTACTGCTTTGGCACAATaGCTTGTCTGCTCCATGCCC +
Preference number: 5 (lower is better)
Translates to: QAPVTLPGSQNDTQQSSITALAQ*LVCSMP
Trigger: GGGCATGGAGCAGACAAGCAATTGTGCCAAAGCAGT...AATGGAACTCTGCTGTGTGTCGTTTTGGGAGCCTGGAAGTGTTACTGGTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp CAGGCACCAGTAACACTTCCAGGCTCCCAAAACGACACACAGCAGAGTTCCATTTACACGAGGAAGATGTaGTACCAGGTGATAGTGCCG +
Preference number: 5 (lower is better)
Translates to: QAPVTLPGSQNDTQQSSIYTRKM*YQVIVP
Trigger: CGGCACTATCACCTGGTACAACATCTTCCTCGTGTA...AATGGAACTCTGCTGTGTGTCGTTTTGGGAGCCTGGAAGTGTTACTGGTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGGGGCAATACGAGATCTaGTGCCAGAAGGTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: TFCYTVVVQLPKCLTPSLGQYEI*CQKVLS
Trigger: GGAAAGGACCTTCTGGCACAAGATCTCGTATTGCCC...CAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS TCA 90 bp TCCTGCAGCTCTTTCTCTGTCAATGTGACATGGATGTCCACCATCTaGCCCTTTTTCTTCCCTCGTGTGATGGTCCCAGTTAAGGTGACG +
Preference number: 5 (lower is better)
Translates to: SCSSFSVNVTWMSTI*PFFFPRVMVPVKVT
Trigger: CGTCACCTTAACTGGGACCATCACACGAGGGAAGAAAAAGGGTCAGATGGTGGACATCCATGTCACATTGACAGAGAAAGAGCTGCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp GTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCAGGCCTTCTACTGCTGTaGGCTCTTCCATTCCAGACC +
Preference number: 5 (lower is better)
Translates to: VSLNRKGVCFSALSSILSGLLLL*ALPFQT
Trigger: GGTCTGGAATGGAAGAGCCAACAGCAGTAGAAGGCC...TGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ATAAGAAGAATCGAGTGGGACTTCTGGGAAGTCTCCTTGAACAGGAAGGGTGTGGGGCAATACGAGATCTaGTGCCAGAAGGTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: IRRIEWDFWEVSLNRKGVGQYEI*CQKVLS
Trigger: GGAAAGGACCTTCTGGCACAAGATCTCGTATTGCCC...CACACCCTTCCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTGGATGGGGTCCTTGTaGGAGAGAGTGCTTGAGATA +
Preference number: 5 (lower is better)
Translates to: TFCYTVVVQLPKCLTPSLWMGSL*ERVLEI
Trigger: TATCTCAAGCACTCTCTCCAACAAGGACCCCATCCA...CAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGGGAGGTTTCTACTTCTaGGATGGGGTCCTTGTTGGA +
Preference number: 5 (lower is better)
Translates to: TFCYTVVVQLPKCLTPSLGGFYF*DGVLVG
Trigger: TCCAACAAGGACCCCATCCAAGAAGTAGAAACCTCC...CAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ATAAGAAGAATCGAGTGGGACTTCTGGGAAGTCTCCTTGAACAGGAAGGGTGTGACTGCTTTGGCACAATaGCTTGTCTGCTCCATGCCC +
Preference number: 5 (lower is better)
Translates to: IRRIEWDFWEVSLNRKGVTALAQ*LVCSMP
Trigger: GGGCATGGAGCAGACAAGCAATTGTGCCAAAGCAGT...CACACCCTTCCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp CAGGCACCAGTAACACTTCCAGGCTCCCAAAACGACACACAGCAGAGTTCCATTTCCCTGTCTATTATCTaGGTGGATTTGGTTACCCCG +
Preference number: 5 (lower is better)
Translates to: QAPVTLPGSQNDTQQSSISLSII*VDLVTP
Trigger: CGGGGTAACCAAATCCACCAAGATAATAGACAGGGA...AATGGAACTCTGCTGTGTGTCGTTTTGGGAGCCTGGAAGTGTTACTGGTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGCTGTTGGAGGAAACTTaGGCAGATGCAATTCCTCCC +
Preference number: 5 (lower is better)
Translates to: TFCYTVVVQLPKCLTPSLLLEET*ADAIPP
Trigger: GGGAGGAATTGCATCTGCCAAAGTTTCCTCCAACAG...CAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS GCA 90 bp CCGTGGAGGTTTCTACTTCTTGGATGGGGTCCTTGTTGGAGAGAGTaGTTGAGATATTGTCGGATTCAAGCAACTCCACAATGCTGTAGG +
Preference number: 5 (lower is better)
Translates to: PWRFLLLGWGPCWRE*LRYCRIQATPQCCR
Trigger: CCTACAGCATTGTGGAGTTGCTTGAATCCGACAATATCTCAAGCACTCTCTCCAACAAGGACCCCATCCAAGAAGTAGAAACCTCCACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS CCA 90 bp AAGATGATATATAGGCTACTGGGGCCAGAGGAGGGAGTAAGTTGTTaGGAGTTTAGACCGTGGAGGTTTCTACTTCTTGGATGGGGTCCT +
Preference number: 5 (lower is better)
Translates to: KMIYRLLGPEEGVSC*EFRPWRFLLLGWGP
Trigger: AGGACCCCATCCAAGAAGTAGAAACCTCCACGGTCTAAACTCCCAACAACTTACTCCCTCCTCTGGCCCCAGTAGCCTATATATCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp AAAGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTGCTTGTCTGCTCCATGGCCTTCTACTGCTGTaGGCTCTTCCATTCCAGACC +
Preference number: 5 (lower is better)
Translates to: KEFVHWVNCFGTIACLLHGLLLL*ALPFQT
Trigger: GGTCTGGAATGGAAGAGCCAACAGCAGTAGAAGGCC...ATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp CAGGCACCAGTAACACTTCCAGGCTCCCAAAACGACACACAGCAGAGTTCCATTAGAGTGCTTGAGATATaGTCGGATTCAAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: QAPVTLPGSQNDTQQSSIRVLEI*SDSSNS
Trigger: GGAGTTGCTTGAATCCGACAATATCTCAAGCACTCT...AATGGAACTCTGCTGTGTGTCGTTTTGGGAGCCTGGAAGTGTTACTGGTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCCCTGTCTATTATCTaGGTGGATTTGGTTACCCCG +
Preference number: 5 (lower is better)
Translates to: TFCYTVVVQLPKCLTPSLSLSII*VDLVTP
Trigger: CGGGGTAACCAAATCCACCAAGATAATAGACAGGGA...CAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp TGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTTTCTGGGAAGTCTCCTaGAACAGGAAGGGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: CYTVVVQLPKCLTPSLSIFWEVS*NRKGVC
Trigger: GCACACACCCTTCCTGTTCAAGGAGACTTCCCAGAA...AATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ATAAGAAGAATCGAGTGGGACTTCTGGGAAGTCTCCTTGAACAGGAAGGGTGTGCTGTTGGAGGAAACTTaGGCAGATGCAATTCCTCCC +
Preference number: 5 (lower is better)
Translates to: IRRIEWDFWEVSLNRKGVLLEET*ADAIPP
Trigger: GGGAGGAATTGCATCTGCCAAAGTTTCCTCCAACAG...CACACCCTTCCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS TCA 90 bp GGAGGTTTCTACTTCTTGGATGGGGTCCTTGTTGGAGAGAGTGCTTaGGATATTGTCGGATTCAAGCAACTCCACAATGCTGTAGGGAGA +
Preference number: 5 (lower is better)
Translates to: GGFYFLDGVLVGESA*DIVGFKQLHNAVGR
Trigger: TCTCCCTACAGCATTGTGGAGTTGCTTGAATCCGACAATATCTCAAGCACTCTCTCCAACAAGGACCCCATCCAAGAAGTAGAAACCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTGGCCTTCTACTGCTGTaGGCTCTTCCATTCCAGACC +
Preference number: 5 (lower is better)
Translates to: RPTSTTRTKSYATIINCTGLLLL*ALPFQT
Trigger: GGTCTGGAATGGAAGAGCCAACAGCAGTAGAAGGCC...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ACTCCATCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTGGCCTTCTACTGCTGTaGGCTCTTCCATTCCAGACC +
Preference number: 5 (lower is better)
Translates to: TPSLSIILVDLVTPRFFIGLLLL*ALPFQT
Trigger: GGTCTGGAATGGAAGAGCCAACAGCAGTAGAAGGCC...AATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp TGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTTACACGAGGAAGATGTaGTACCAGGTGATAGTGCCG +
Preference number: 5 (lower is better)
Translates to: CYTVVVQLPKCLTPSLSIYTRKM*YQVIVP
Trigger: CGGCACTATCACCTGGTACAACATCTTCCTCGTGTA...AATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp TGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTGGAGGTTTCTACTTCTaGGATGGGGTCCTTGTTGGA +
Preference number: 5 (lower is better)
Translates to: CYTVVVQLPKCLTPSLSIGGFYF*DGVLVG
Trigger: TCCAACAAGGACCCCATCCAAGAAGTAGAAACCTCC...AATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp TCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCTCCCTACTGCTTTGGCACAATaGCTTGTCTGCTCCATGCCC +
Preference number: 5 (lower is better)
Translates to: SLSIILVDLVTPRFFILPTALAQ*LVCSMP
Trigger: GGGCATGGAGCAGACAAGCAATTGTGCCAAAGCAGT...AGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp GAGAGAGTTCCTCTGAAGGTGGAGCTCAGCACCATACATCAGGCAAATGTCCTGATTATCTTGGTGGATTaGGTTACCCCGAGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: ERVPLKVELSTIHQANVLIILVD*VTPRFF
Trigger: AAAGAACCTCGGGGTAACCAAATCCACCAAGATAAT...CAGGACATTTGCCTGATGTATGGTGCTGAGCTCCACCTTCAGAGGAACTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ATCTTTACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATTCTGGGAAGTCTCCTaGAACAGGAAGGGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: IFTFCYTVVVQLPKCLTPFWEVS*NRKGVC
Trigger: GCACACACCCTTCCTGTTCAAGGAGACTTCCCAGAA...TGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGTAAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp AAAGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTGCTTGTCTGCTCCATTTCTGGGAAGTCTCCTaGAACAGGAAGGGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: KEFVHWVNCFGTIACLLHFWEVS*NRKGVC
Trigger: GCACACACCCTTCCTGTTCAAGGAGACTTCCCAGAA...ATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp GAGAGAGTTCCTCTGAAGGTGGAGCTCAGCACCATACATCAGGCAAATGTCCTGGGCAAAGATTCTGACTaGCCTACCAAGATAACCATT +
Preference number: 5 (lower is better)
Translates to: ERVPLKVELSTIHQANVLGKDSD*PTKITI
Trigger: AATGGTTATCTTGGTAGGCAAGTCAGAATCTTTGCC...CAGGACATTTGCCTGATGTATGGTGCTGAGCTCCACCTTCAGAGGAACTCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS CCA 90 bp GAGTTTAGACCGTGGAGGTTTCTACTTCTTGGATGGGGTCCTTGTTaGAGAGAGTGCTTGAGATATTGTCGGATTCAAGCAACTCCACAA +
Preference number: 5 (lower is better)
Translates to: EFRPWRFLLLGWGPC*RECLRYCRIQATPQ
Trigger: TTGTGGAGTTGCTTGAATCCGACAATATCTCAAGCACTCTCTCCAACAAGGACCCCATCCAAGAAGTAGAAACCTCCACGGTCTAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp AGAAACATGGATGTGATGGCTGAAGATGTAATCAGCACTGGGATGTTGGGGATATACACGAGGAAGATGTaGTACCAGGTGATAGTGCCG +
Preference number: 5 (lower is better)
Translates to: RNMDVMAEDVISTGMLGIYTRKM*YQVIVP
Trigger: CGGCACTATCACCTGGTACAACATCTTCCTCGTGTA...TATCCCCAACATCCCAGTGCTGATTACATCTTCAGCCATCACATCCATGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ACTCCATCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTGGGCAATACGAGATCTaGTGCCAGAAGGTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: TPSLSIILVDLVTPRFFIGQYEI*CQKVLS
Trigger: GGAAAGGACCTTCTGGCACAAGATCTCGTATTGCCC...AATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ATGGTAAAACTGATCAGTATGGACTCTGATTTCCCAGAAGAACTGCGGAGAGTAGGGCAATACGAGATCTaGTGCCAGAAGGTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: MVKLISMDSDFPEELRRVGQYEI*CQKVLS
Trigger: GGAAAGGACCTTCTGGCACAAGATCTCGTATTGCCC...TACTCTCCGCAGTTCTTCTGGGAAATCAGAGTCCATACTGATCAGTTTTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ATCTTTACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATGGATGGGGTCCTTGTaGGAGAGAGTGCTTGAGATA +
Preference number: 5 (lower is better)
Translates to: IFTFCYTVVVQLPKCLTPWMGSL*ERVLEI
Trigger: TATCTCAAGCACTCTCTCCAACAAGGACCCCATCCA...TGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGTAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp TCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCTCCCTTGGATGGGGTCCTTGTaGGAGAGAGTGCTTGAGATA +
Preference number: 5 (lower is better)
Translates to: SLSIILVDLVTPRFFILPWMGSL*ERVLEI
Trigger: TATCTCAAGCACTCTCTCCAACAAGGACCCCATCCA...AGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp AGAAACATGGATGTGATGGCTGAAGATGTAATCAGCACTGGGATGTTGGGGATAGGAGGTTTCTACTTCTaGGATGGGGTCCTTGTTGGA +
Preference number: 5 (lower is better)
Translates to: RNMDVMAEDVISTGMLGIGGFYF*DGVLVG
Trigger: TCCAACAAGGACCCCATCCAAGAAGTAGAAACCTCC...TATCCCCAACATCCCAGTGCTGATTACATCTTCAGCCATCACATCCATGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp CAGGTAGACACAAGTTTCTCAGCACAGCAAAGATCATGTCTGTGGTTAAACTCACTTTGGCACAATTGCTaGTCTGCTCCATGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: QVDTSFSAQQRSCLWLNSLWHNC*SAPCPP
Trigger: AGGAGGGCATGGAGCAGACAAGCAATTGTGCCAAAG...TGAGTTTAACCACAGACATGATCTTTGCTGTGCTGAGAAACTTGTGTCTACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ACACAAATCTTTACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCCTTTGGCACAATTGCTaGTCTGCTCCATGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: TQIFTFCYTVVVQLPKCLLWHNC*SAPCPP
Trigger: AGGAGGGCATGGAGCAGACAAGCAATTGTGCCAAAG...GAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGTAAAGATTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATTTAGTCACATACTCCCTTTGGCACAATTGCTaGTCTGCTCCATGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: IWLPRGSLFSLTHLVTYSLWHNC*SAPCPP
Trigger: AGGAGGGCATGGAGCAGACAAGCAATTGTGCCAAAG...GGAGTATGTGACTAAATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ATGGTAAAACTGATCAGTATGGACTCTGATTTCCCAGAAGAACTGCGGAGAGTATTCTGGGAAGTCTCCTaGAACAGGAAGGGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: MVKLISMDSDFPEELRRVFWEVS*NRKGVC
Trigger: GCACACACCCTTCCTGTTCAAGGAGACTTCCCAGAA...TACTCTCCGCAGTTCTTCTGGGAAATCAGAGTCCATACTGATCAGTTTTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGGGCAAAGATTCTGACTaGCCTACCAAGATAACCATT +
Preference number: 5 (lower is better)
Translates to: TFCYTVVVQLPKCLTPSLGKDSD*PTKITI
Trigger: AATGGTTATCTTGGTAGGCAAGTCAGAATCTTTGCC...CAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp AAAGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTGCTTGTCTGCTCCATCTGTTGGAGGAAACTTaGGCAGATGCAATTCCTCCC +
Preference number: 5 (lower is better)
Translates to: KEFVHWVNCFGTIACLLHLLEET*ADAIPP
Trigger: GGGAGGAATTGCATCTGCCAAAGTTTCCTCCAACAG...ATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGCTAAATCTGGCTTCTTaGTACTTAGGGCTACTGATC +
Preference number: 5 (lower is better)
Translates to: TFCYTVVVQLPKCLTPSLLNLAS*YLGLLI
Trigger: GATCAGTAGCCCTAAGTACAAAGAAGCCAGATTTAG...CAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp TGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTGCTCTGAGTGAGGTTTaGCCAAACAACAGAAGGCTA +
Preference number: 5 (lower is better)
Translates to: CYTVVVQLPKCLTPSLSIALSEV*PNNRRL
Trigger: TAGCCTTCTGTTGTTTGGCAAAACCTCACTCAGAGC...AATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS CCA 90 bp GTAAGTTGTTGGGAGTTTAGACCGTGGAGGTTTCTACTTCTTGGATaGGGTCCTTGTTGGAGAGAGTGCTTGAGATATTGTCGGATTCAA +
Preference number: 5 (lower is better)
Translates to: VSCWEFRPWRFLLLG*GPCWRECLRYCRIQ
Trigger: TTGAATCCGACAATATCTCAAGCACTCTCTCCAACAAGGACCCCATCCAAGAAGTAGAAACCTCCACGGTCTAAACTCCCAACAACTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp AAAGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTGCTTGTCTGCTCCATGATGACTCTTTAGGTTaGGTCAGTTCCTGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: KEFVHWVNCFGTIACLLHDDSLG*VSSCSS
Trigger: AGAGCTGCAGGAACTGACCAAACCTAAAGAGTCATC...ATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp CAGGTAGACACAAGTTTCTCAGCACAGCAAAGATCATGTCTGTGGTTAAACTCATACACGAGGAAGATGTaGTACCAGGTGATAGTGCCG +
Preference number: 5 (lower is better)
Translates to: QVDTSFSAQQRSCLWLNSYTRKM*YQVIVP
Trigger: CGGCACTATCACCTGGTACAACATCTTCCTCGTGTA...TGAGTTTAACCACAGACATGATCTTTGCTGTGCTGAGAAACTTGTGTCTACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp GTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCAAGAGTGCTTGAGATATaGTCGGATTCAAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: VSLNRKGVCFSALSSILSRVLEI*SDSSNS
Trigger: GGAGTTGCTTGAATCCGACAATATCTCAAGCACTCT...TGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp TGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTAGAGTGCTTGAGATATaGTCGGATTCAAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: CYTVVVQLPKCLTPSLSIRVLEI*SDSSNS
Trigger: GGAGTTGCTTGAATCCGACAATATCTCAAGCACTCT...AATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp TCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCCTCTTGGATGGGGTCCTaGTTGGAGAGAGTGCTTGAG +
Preference number: 5 (lower is better)
Translates to: STTRTKSYATIINCTLLSSWMGS*LERVLE
Trigger: CTCAAGCACTCTCTCCAACAAGGACCCCATCCAAGA...GGACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp TGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTAAAAGAGTTTGTCCATaGGGTGAACTGCTTTGGCAC +
Preference number: 5 (lower is better)
Translates to: CYTVVVQLPKCLTPSLSIKRVCP*GELLWH
Trigger: GTGCCAAAGCAGTTCACCCAATGGACAAACTCTTTT...AATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp GTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCACATTTCCAGCCTCTTTaGCTCATGACATCATGTGAC +
Preference number: 5 (lower is better)
Translates to: VSLNRKGVCFSALSSILSHFQPL*LMTSCD
Trigger: GTCACATGATGTCATGAGCAAAAGAGGCTGGAAATG...TGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ATAAGAAGAATCGAGTGGGACTTCTGGGAAGTCTCCTTGAACAGGAAGGGTGTGCTAAATCTGGCTTCTTaGTACTTAGGGCTACTGATC +
Preference number: 5 (lower is better)
Translates to: IRRIEWDFWEVSLNRKGVLNLAS*YLGLLI
Trigger: GATCAGTAGCCCTAAGTACAAAGAAGCCAGATTTAG...CACACCCTTCCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp AAAGAGTTTGTCCATTGGGTGAACTGCTTTGGCACAATTGCTTGTCTGCTCCATGCTCTGAGTGAGGTTTaGCCAAACAACAGAAGGCTA +
Preference number: 5 (lower is better)
Translates to: KEFVHWVNCFGTIACLLHALSEV*PNNRRL
Trigger: TAGCCTTCTGTTGTTTGGCAAAACCTCACTCAGAGC...ATGGAGCAGACAAGCAATTGTGCCAAAGCAGTTCACCCAATGGACAAACTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp AGAAACATGGATGTGATGGCTGAAGATGTAATCAGCACTGGGATGTTGGGGATAAGAGTGCTTGAGATATaGTCGGATTCAAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: RNMDVMAEDVISTGMLGIRVLEI*SDSSNS
Trigger: GGAGTTGCTTGAATCCGACAATATCTCAAGCACTCT...TATCCCCAACATCCCAGTGCTGATTACATCTTCAGCCATCACATCCATGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp GTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCATGTTGGAGAGAGTGCTaGAGATATTGTCGGATTCAA +
Preference number: 5 (lower is better)
Translates to: VSLNRKGVCFSALSSILSCWREC*RYCRIQ
Trigger: TTGAATCCGACAATATCTCAAGCACTCTCTCCAACA...TGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp TGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTTGTTGGAGAGAGTGCTaGAGATATTGTCGGATTCAA +
Preference number: 5 (lower is better)
Translates to: CYTVVVQLPKCLTPSLSICWREC*RYCRIQ
Trigger: TTGAATCCGACAATATCTCAAGCACTCTCTCCAACA...AATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ACACAAATCTTTACCTTCTGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCTCCCTGTCTATTATCTaGGTGGATTTGGTTACCCCG +
Preference number: 5 (lower is better)
Translates to: TQIFTFCYTVVVQLPKCLSLSII*VDLVTP
Trigger: CGGGGTAACCAAATCCACCAAGATAATAGACAGGGA...GAGACATTTAGGAAGCTGGACTACCACAGTGTAGCAGAAGGTAAAGATTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp GTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTATCACTAAATCTGGCTTCTTaGTACTTAGGGCTACTGATC +
Preference number: 5 (lower is better)
Translates to: VSLNRKGVCFSALSSILSLNLAS*YLGLLI
Trigger: GATCAGTAGCCCTAAGTACAAAGAAGCCAGATTTAG...TGATAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ATGGTAAAACTGATCAGTATGGACTCTGATTTCCCAGAAGAACTGCGGAGAGTAGCTCTGAGTGAGGTTTaGCCAAACAACAGAAGGCTA +
Preference number: 5 (lower is better)
Translates to: MVKLISMDSDFPEELRRVALSEV*PNNRRL
Trigger: TAGCCTTCTGTTGTTTGGCAAAACCTCACTCAGAGC...TACTCTCCGCAGTTCTTCTGGGAAATCAGAGTCCATACTGATCAGTTTTACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTGCTCTGAGTGAGGTTTaGCCAAACAACAGAAGGCTA +
Preference number: 5 (lower is better)
Translates to: RPTSTTRTKSYATIINCTALSEV*PNNRRL
Trigger: TAGCCTTCTGTTGTTTGGCAAAACCTCACTCAGAGC...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp TCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCTCCCTTGTTGGAGAGAGTGCTaGAGATATTGTCGGATTCAA +
Preference number: 5 (lower is better)
Translates to: SLSIILVDLVTPRFFILPCWREC*RYCRIQ
Trigger: TTGAATCCGACAATATCTCAAGCACTCTCTCCAACA...AGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp AAACAAAACCCAAATAACCATTCTTCCTTTTTCTTGCCAATTAGCGTGAACCCATCTTGGATGGGGTCCTaGTTGGAGAGAGTGCTTGAG +
Preference number: 5 (lower is better)
Translates to: KQNPNNHSSFFLPISVNPSWMGS*LERVLE
Trigger: CTCAAGCACTCTCTCCAACAAGGACCCCATCCAAGA...TGGGTTCACGCTAATTGGCAAGAAAAAGGAAGAATGGTTATTTGGGTTTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAAATTCACTGCTTTGGCACAATaGCTTGTCTGCTCCATGCCC +
Preference number: 5 (lower is better)
Translates to: MNKKRAPAILIRTQISKFTALAQ*LVCSMP
Trigger: GGGCATGGAGCAGACAAGCAATTGTGCCAAAGCAGT...GAATTTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ATGGTAAAACTGATCAGTATGGACTCTGATTTCCCAGAAGAACTGCGGAGAGTAAAAAGAGTTTGTCCATaGGGTGAACTGCTTTGGCAC +
Preference number: 5 (lower is better)
Translates to: MVKLISMDSDFPEELRRVKRVCP*GELLWH
Trigger: GTGCCAAAGCAGTTCACCCAATGGACAAACTCTTTT...TACTCTCCGCAGTTCTTCTGGGAAATCAGAGTCCATACTGATCAGTTTTACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATTTAGTCACATACTCCAAAAGAGTTTGTCCATaGGGTGAACTGCTTTGGCAC +
Preference number: 5 (lower is better)
Translates to: IWLPRGSLFSLTHLVTYSKRVCP*GELLWH
Trigger: GTGCCAAAGCAGTTCACCCAATGGACAAACTCTTTT...GGAGTATGTGACTAAATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp AGAAACATGGATGTGATGGCTGAAGATGTAATCAGCACTGGGATGTTGGGGATACATGTGACTGAGGTCTaGCCAATGAGATATAAGAAG +
Preference number: 5 (lower is better)
Translates to: RNMDVMAEDVISTGMLGIHVTEV*PMRYKK
Trigger: CTTCTTATATCTCATTGGCAAGACCTCAGTCACATG...TATCCCCAACATCCCAGTGCTGATTACATCTTCAGCCATCACATCCATGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCATTTCCAGCCTCTTTaGCTCATGACATCATGTGAC +
Preference number: 5 (lower is better)
Translates to: RPTSTTRTKSYATIINCTHFQPL*LMTSCD
Trigger: GTCACATGATGTCATGAGCAAAAGAGGCTGGAAATG...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp AGAAACATGGATGTGATGGCTGAAGATGTAATCAGCACTGGGATGTTGGGGATAGGCAAAGATTCTGACTaGCCTACCAAGATAACCATT +
Preference number: 5 (lower is better)
Translates to: RNMDVMAEDVISTGMLGIGKDSD*PTKITI
Trigger: AATGGTTATCTTGGTAGGCAAGTCAGAATCTTTGCC...TATCCCCAACATCCCAGTGCTGATTACATCTTCAGCCATCACATCCATGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ATAAGAAGAATCGAGTGGGACTTCTGGGAAGTCTCCTTGAACAGGAAGGGTGTGAACCATATTAGCAGTTaGGGGGTTCTGAATGTATTT +
Preference number: 5 (lower is better)
Translates to: IRRIEWDFWEVSLNRKGVNHISS*GVLNVF
Trigger: AAATACATTCAGAACCCCCAAACTGCTAATATGGTT...CACACCCTTCCTGTTCAAGGAGACTTCCCAGAAGTCCCACTCGATTCTTCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ACTCCATCCCTGTCTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTACAAACTCCTCTGGTTaGATTCATCGCAGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: TPSLSIILVDLVTPRFFITNSSG*IHRSSS
Trigger: AGAACTGCTGCGATGAATCAAACCAGAGGAGTTTGT...AATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAGACAGGGATGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTACAAACTCCTCTGGTTaGATTCATCGCAGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: RPTSTTRTKSYATIINCTTNSSG*IHRSSS
Trigger: AGAACTGCTGCGATGAATCAAACCAGAGGAGTTTGT...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp TTACAGAAGCTTAATTGCAAAGTACGTGAGGTGCTAATATCGATGTATAGCATATCTTGGATGGGGTCCTaGTTGGAGAGAGTGCTTGAG +
Preference number: 5 (lower is better)
Translates to: LQKLNCKVREVLISMYSISWMGS*LERVLE
Trigger: CTCAAGCACTCTCTCCAACAAGGACCCCATCCAAGA...TATGCTATACATCGATATTAGCACCTCACGTACTTTGCAATTAAGCTTCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAAATTCGGAGGTTTCTACTTCTaGGATGGGGTCCTTGTTGGA +
Preference number: 5 (lower is better)
Translates to: MNKKRAPAILIRTQISKFGGFYF*DGVLVG
Trigger: TCCAACAAGGACCCCATCCAAGAAGTAGAAACCTCC...GAATTTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp CAGGTAGACACAAGTTTCTCAGCACAGCAAAGATCATGTCTGTGGTTAAACTCACATGTGACTGAGGTCTaGCCAATGAGATATAAGAAG +
Preference number: 5 (lower is better)
Translates to: QVDTSFSAQQRSCLWLNSHVTEV*PMRYKK
Trigger: CTTCTTATATCTCATTGGCAAGACCTCAGTCACATG...TGAGTTTAACCACAGACATGATCTTTGCTGTGCTGAGAAACTTGTGTCTACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp TCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCCCATTTCCAGCCTCTTTaGCTCATGACATCATGTGAC +
Preference number: 5 (lower is better)
Translates to: STTRTKSYATIINCTLLSHFQPL*LMTSCD
Trigger: GTCACATGATGTCATGAGCAAAAGAGGCTGGAAATG...GGACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp CGTCCCACCTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTGGCAAAGATTCTGACTaGCCTACCAAGATAACCATT +
Preference number: 5 (lower is better)
Translates to: RPTSTTRTKSYATIINCTGKDSD*PTKITI
Trigger: AATGGTTATCTTGGTAGGCAAGTCAGAATCTTTGCC...AGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAGGTGGGACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp GAAGTCTCCTTGAACAGGAAGGGTGTGTGCTTCTCTGCCCTTTCCTCTATTTTAAACCATATTAGCAGTTaGGGGGTTCTGAATGTATTT +
Preference number: 5 (lower is better)
Translates to: EVSLNRKGVCFSALSSILNHISS*GVLNVF
Trigger: AAATACATTCAGAACCCCCAAACTGCTAATATGGTT...TAAAATAGAGGAAAGGGCAGAGAAGCACACACCCTTCCTGTTCAAGGAGACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp AAACAAAACCCAAATAACCATTCTTCCTTTTTCTTGCCAATTAGCGTGAACCCACTGTTGGAGGAAACTTaGGCAGATGCAATTCCTCCC +
Preference number: 5 (lower is better)
Translates to: KQNPNNHSSFFLPISVNPLLEET*ADAIPP
Trigger: GGGAGGAATTGCATCTGCCAAAGTTTCCTCCAACAG...TGGGTTCACGCTAATTGGCAAGAAAAAGGAAGAATGGTTATTTGGGTTTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp CAGGTAGACACAAGTTTCTCAGCACAGCAAAGATCATGTCTGTGGTTAAACTCACTAAATCTGGCTTCTTaGTACTTAGGGCTACTGATC +
Preference number: 5 (lower is better)
Translates to: QVDTSFSAQQRSCLWLNSLNLAS*YLGLLI
Trigger: GATCAGTAGCCCTAAGTACAAAGAAGCCAGATTTAG...TGAGTTTAACCACAGACATGATCTTTGCTGTGCTGAGAAACTTGTGTCTACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp TGCTACACTGTGGTAGTCCAGCTTCCTAAATGTCTCACTCCATCCCTGTCTATTCTCAACAGCTTTGTTTaGAGACATGAACAAGAAAAG +
Preference number: 5 (lower is better)
Translates to: CYTVVVQLPKCLTPSLSILNSFV*RHEQEK
Trigger: CTTTTCTTGTTCATGTCTCAAAACAAAGCTGTTGAG...AATAGACAGGGATGGAGTGAGACATTTAGGAAGCTGGACTACCACAGTGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp TCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCCACAAACTCCTCTGGTTaGATTCATCGCAGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: STTRTKSYATIINCTLLSTNSSG*IHRSSS
Trigger: AGAACTGCTGCGATGAATCAAACCAGAGGAGTTTGT...GGACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp CTCCACCACCAGGACAAAGAGTTATGCTACTATTATAAATTGTACTCTCCTGTCTGTTGGAGAGAGTGCTaGAGATATTGTCGGATTCAA +
Preference number: 5 (lower is better)
Translates to: LHHQDKELCYYYKLYSPVCWREC*RYCRIQ
Trigger: TTGAATCCGACAATATCTCAAGCACTCTCTCCAACA...GACAGGAGAGTACAATTTATAATAGTAGCATAACTCTTTGTCCTGGTGGTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp AGAAACATGGATGTGATGGCTGAAGATGTAATCAGCACTGGGATGTTGGGGATAAACCATATTAGCAGTTaGGGGGTTCTGAATGTATTT +
Preference number: 5 (lower is better)
Translates to: RNMDVMAEDVISTGMLGINHISS*GVLNVF
Trigger: AAATACATTCAGAACCCCCAAACTGCTAATATGGTT...TATCCCCAACATCCCAGTGCTGATTACATCTTCAGCCATCACATCCATGTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp AGACATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAAATTATCTTGGTGGATTaGGTTACCCCGAGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: RHEQEKSTSYSYKDPNLQIILVD*VTPRFF
Trigger: AAAGAACCTCGGGGTAACCAAATCCACCAAGATAAT...TTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp AGACATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAACATGTGACTGAGGTCTaGCCAATGAGATATAAGAAG +
Preference number: 5 (lower is better)
Translates to: RHEQEKSTSYSYKDPNLQHVTEV*PMRYKK
Trigger: CTTCTTATATCTCATTGGCAAGACCTCAGTCACATG...TTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp ATGAACAAGAAAAGAGCACCAGCTATTCTTATAAGGACCCAAATCTCCAAATTCCATTTCCAGCCTCTTTaGCTCATGACATCATGTGAC +
Preference number: 5 (lower is better)
Translates to: MNKKRAPAILIRTQISKFHFQPL*LMTSCD
Trigger: GTCACATGATGTCATGAGCAAAAGAGGCTGGAAATG...GAATTTGGAGATTTGGGTCCTTATAAGAATAGCTGGTGCTCTTTTCTTGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp CTATTATCTTGGTGGATTTGGTTACCCCGAGGTTCTTTATTCTCCCTGACACATCTCAACAGCTTTGTTTaGAGACATGAACAAGAAAAG +
Preference number: 5 (lower is better)
Translates to: LLSWWIWLPRGSLFSLTHLNSFV*RHEQEK
Trigger: CTTTTCTTGTTCATGTCTCAAAACAAAGCTGTTGAG...ATGTGTCAGGGAGAATAAAGAACCTCGGGGTAACCAAATCCACCAAGATAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295658.8
ENST00000437356.7
ENST00000454545.5
CDS-3UTR CAA 90 bp TTACAGAAGCTTAATTGCAAAGTACGTGAGGTGCTAATATCGATGTATAGCATACATGTGACTGAGGTCTaGCCAATGAGATATAAGAAG +
Preference number: 5 (lower is better)
Translates to: LQKLNCKVREVLISMYSIHVTEV*PMRYKK
Trigger: CTTCTTATATCTCATTGGCAAGACCTCAGTCACATG...TATGCTATACATCGATATTAGCACCTCACGTACTTTGCAATTAAGCTTCTGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS CAA 72 bp GCACCACACCTGCCCAGGGACCGACGCTGGCGGAGGTaGCGGACAGCCGGCGGGGAGCGGTTCTGCTCCGGG +
Preference number: 6 (lower is better)
Translates to: APHLPRDRRWRR*RTAGGERFCSG
Trigger: CCCGGAGCAGAACCGCTCCCCGCCGGCTGTCCGCAACCTCCGCCAGCGTCGGTCCCTGGGCAGGTGTGGTGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454545.5
CDS GCA 72 bp CACCACACCTGCCCAGGGACCGACGCTGGCGGAGGTTaGGGACAGCCGGCGGGGAGCGGTTCTGCTCCGGGA +
Preference number: 6 (lower is better)
Translates to: HHTCPGTDAGGG*GQPAGSGSAPG
Trigger: TCCCGGAGCAGAACCGCTCCCCGCCGGCTGTCCGCAACCTCCGCCAGCGTCGGTCCCTGGGCAGGTGTGGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454545.5
CDS GCA 72 bp TTCCACACCTGCCCAGGGACCGACGCTGGCGGAGGTTaGGGACAGCCGGCGGGGAGCGGTTCTGCTCCGGGA +
Preference number: 6 (lower is better)
Translates to: FHTCPGTDAGGG*GQPAGSGSAPG
Trigger: TCCCGGAGCAGAACCGCTCCCCGCCGGCTGTCCGCAACCTCCGCCAGCGTCGGTCCCTGGGCAGGTGTGGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295658.8
CDS CCA 72 bp GAGCAGTCTCACCCACACCTGCCCAGGGACCGACGCTaGCGGAGGTTGCGGACAGCCGGCGGGGAGCGGTTC +
Preference number: 6 (lower is better)
Translates to: EQSHPHLPRDRR*RRLRTAGGERF
Trigger: GAACCGCTCCCCGCCGGCTGTCCGCAACCTCCGCCAGCGTCGGTCCCTGGGCAGGTGTGGGTGAGACTGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406027.2
CDS CAA 72 bp ATTCCACACCTGCCCAGGGACCGACGCTGGCGGAGGTaGCGGACAGCCGGCGGGGAGCGGTTCTGCTCCGGG +
Preference number: 6 (lower is better)
Translates to: IPHLPRDRRWRR*RTAGGERFCSG
Trigger: CCCGGAGCAGAACCGCTCCCCGCCGGCTGTCCGCAACCTCCGCCAGCGTCGGTCCCTGGGCAGGTGTGGAAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295658.8
CDS CAA 90 bp CCCAAGGATGCATTCCACCTGCCCAGGGACCGACGCTGGCGGAGGTaGCGGACAGCCGGCGGGGAGCGGTTCTGCTCCGGGAGGATGCGG +
Preference number: 6 (lower is better)
Translates to: PKDAFHLPRDRRWRR*RTAGGERFCSGRMR
Trigger: CCGCATCCTCCCGGAGCAGAACCGCTCCCCGCCGGCTGTCCGCAACCTCCGCCAGCGTCGGTCCCTGGGCAGGTGGAATGCATCCTTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433112.5
CDS CAA 90 bp TTTCCAGCTGCACCACACCTGCCCAGGGACCGACGCTGGCGGAGGTaGCGGACAGCCGGCGGGGAGCGGTTCTGCTCCGGGAGGATGCGG +
Preference number: 6 (lower is better)
Translates to: FPAAPHLPRDRRWRR*RTAGGERFCSGRMR
Trigger: CCGCATCCTCCCGGAGCAGAACCGCTCCCCGCCGGCTGTCCGCAACCTCCGCCAGCGTCGGTCCCTGGGCAGGTGTGGTGCAGCTGGAAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454545.5
CDS CCA 72 bp CCCAAGGATGCATTCCACCTGCCCAGGGACCGACGCTaGCGGAGGTTGCGGACAGCCGGCGGGGAGCGGTTC +
Preference number: 6 (lower is better)
Translates to: PKDAFHLPRDRR*RRLRTAGGERF
Trigger: GAACCGCTCCCCGCCGGCTGTCCGCAACCTCCGCCAGCGTCGGTCCCTGGGCAGGTGGAATGCATCCTTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433112.5
CDS CCA 72 bp GATGCATTCCACCCACACCTGCCCAGGGACCGACGCTaGCGGAGGTTGCGGACAGCCGGCGGGGAGCGGTTC +
Preference number: 6 (lower is better)
Translates to: DAFHPHLPRDRR*RRLRTAGGERF
Trigger: GAACCGCTCCCCGCCGGCTGTCCGCAACCTCCGCCAGCGTCGGTCCCTGGGCAGGTGTGGGTGGAATGCATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437356.7
CDS CAA 90 bp CAAGGATGCATTCCACACCTGCCCAGGGACCGACGCTGGCGGAGGTaGCGGACAGCCGGCGGGGAGCGGTTCTGCTCCGGGAGGATGCGG +
Preference number: 6 (lower is better)
Translates to: QGCIPHLPRDRRWRR*RTAGGERFCSGRMR
Trigger: CCGCATCCTCCCGGAGCAGAACCGCTCCCCGCCGGCTGTCCGCAACCTCCGCCAGCGTCGGTCCCTGGGCAGGTGTGGAATGCATCCTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295658.8
CDS CCA 72 bp CAAGGATGCATTCCACACCTGCCCAGGGACCGACGCTaGCGGAGGTTGCGGACAGCCGGCGGGGAGCGGTTC +
Preference number: 6 (lower is better)
Translates to: QGCIPHLPRDRR*RRLRTAGGERF
Trigger: GAACCGCTCCCCGCCGGCTGTCCGCAACCTCCGCCAGCGTCGGTCCCTGGGCAGGTGTGGAATGCATCCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295658.8
CDS CCA 72 bp ACCACAGGCAGGCAGATCAGCGTCCAGAGGACCACATaGGGCCCACGGTCAGCTCCCATCTGGCAGGCCATT +
Preference number: 6 (lower is better)
Translates to: TTGRQISVQRTT*GPRSAPIWQAI
Trigger: AATGGCCTGCCAGATGGGAGCTGACCGTGGGCCCCATGTGGTCCTCTGGACGCTGATCTGCCTGCCTGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS CAA 90 bp GCTGCAGAGCCAGCCACAGAAGCCTTTCTCCATGTCCCGGGCAGCTaGCCACCATGCTTCCCAGGACCACGAGAGCTGGACCACAGCAGC +
Preference number: 6 (lower is better)
Translates to: AAEPATEAFLHVPGS*PPCFPGPRELDHSS
Trigger: GCTGCTGTGGTCCAGCTCTCGTGGTCCTGGGAAGCATGGTGGCAAGCTGCCCGGGACATGGAGAAAGGCTTCTGTGGCTGGCTCTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS GCA 72 bp GAAGCCTTTCTCCATGTCCCGGGCAGCTTGCCACCATaGTTCCCAGGACCACGAGAGCTGGACCACAGCAGC +
Preference number: 6 (lower is better)
Translates to: EAFLHVPGSLPP*FPGPRELDHSS
Trigger: GCTGCTGTGGTCCAGCTCTCGTGGTCCTGGGAAGCATGGTGGCAAGCTGCCCGGGACATGGAGAAAGGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS GCA 72 bp CAGCCACAGAAGCCTTTCTCCATGTCCCGGGCAGCTTaGCACCATGCTTCCCAGGACCACGAGAGCTGGACC +
Preference number: 6 (lower is better)
Translates to: QPQKPFSMSRAA*HHASQDHESWT
Trigger: GGTCCAGCTCTCGTGGTCCTGGGAAGCATGGTGGCAAGCTGCCCGGGACATGGAGAAAGGCTTCTGTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS CAA 72 bp CCAGCCACAGAAGCCTTTCTCCATGTCCCGGGCAGCTaGCCACCATGCTTCCCAGGACCACGAGAGCTGGAC +
Preference number: 6 (lower is better)
Translates to: PATEAFLHVPGS*PPCFPGPRELD
Trigger: GTCCAGCTCTCGTGGTCCTGGGAAGCATGGTGGCAAGCTGCCCGGGACATGGAGAAAGGCTTCTGTGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS CCA 72 bp CAGAGGACCACATGGGGCCCACGGTCAGCTCCCATCTaGCAGGCCATTCTTCCTTCAGGCGTCGTTTCCCTT +
Preference number: 6 (lower is better)
Translates to: QRTTWGPRSAPI*QAILPSGVVSL
Trigger: AAGGGAAACGACGCCTGAAGGAAGAATGGCCTGCCAGATGGGAGCTGACCGTGGGCCCCATGTGGTCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS GCA 72 bp CTGGTGGGGGCTTGGAAGCTGGACCTGGCCTTCTACTaGTGTTGGCTCTTCCATTCCAGACCTGACGTCTAC +
Preference number: 6 (lower is better)
Translates to: LVGAWKLDLAFY*CWLFHSRPDVY
Trigger: GTAGACGTCAGGTCTGGAATGGAAGAGCCAACAGCAGTAGAAGGCCAGGTCCAGCTTCCAAGCCCCCACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000433112.5
ENST00000437356.7
ENST00000454545.5
ENST00000455479.5
CDS GCA 72 bp AATTTAAAGAAACGAACGAGCAGTCTCACCCACACCTaGCCAGGGACCGACGCTGGCGGAGGTTGCGGACAG +
Preference number: 6 (lower is better)
Translates to: NLKKRTSSLTHT*PGTDAGGGCGQ
Trigger: CTGTCCGCAACCTCCGCCAGCGTCGGTCCCTGGGCAGGTGTGGGTGAGACTGCTCGTTCGTTTCTTTAAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406027.2
CDS CCA 72 bp CCAGAGGAGGGAGTAAGTTGTTGGGAGTTTAGACCGTaGAGGTTTCTACTTCTTGGATGGGGTCCTTGTTGG +
Preference number: 6 (lower is better)
Translates to: PEEGVSCWEFRP*RFLLLGWGPCW
Trigger: CCAACAAGGACCCCATCCAAGAAGTAGAAACCTCCACGGTCTAAACTCCCAACAACTTACTCCCTCCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS GCA 72 bp TGCTTGAGATATTGTCGGATTCAAGCAACTCCACAATaGTGTAGGGAGAACAGTCCTCCAGACCCAGCTTGC +
Preference number: 6 (lower is better)
Translates to: CLRYCRIQATPQ*CRENSPPDPAC
Trigger: GCAAGCTGGGTCTGGAGGACTGTTCTCCCTACAGCATTGTGGAGTTGCTTGAATCCGACAATATCTCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS CAA 72 bp ACCGTGGAGGTTTCTACTTCTTGGATGGGGTCCTTGTaGGAGAGAGTGCTTGAGATATTGTCGGATTCAAGC +
Preference number: 6 (lower is better)
Translates to: TVEVSTSWMGSL*ERVLEILSDSS
Trigger: GCTTGAATCCGACAATATCTCAAGCACTCTCTCCAACAAGGACCCCATCCAAGAAGTAGAAACCTCCACGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS CAA 90 bp TGGAGGTTTCTACTTCTTGGATGGGGTCCTTGTTGGAGAGAGTGCTaGAGATATTGTCGGATTCAAGCAACTCCACAATGCTGTAGGGAG +
Preference number: 6 (lower is better)
Translates to: WRFLLLGWGPCWREC*RYCRIQATPQCCRE
Trigger: CTCCCTACAGCATTGTGGAGTTGCTTGAATCCGACAATATCTCAAGCACTCTCTCCAACAAGGACCCCATCCAAGAAGTAGAAACCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS TCA 72 bp GGCCTTCTACTGCTGTTGGCTCTTCCATTCCAGACCTaGCGTCTACCTATGTCTTATAAAGAGTTGGACTTG +
Preference number: 6 (lower is better)
Translates to: GLLLLLALPFQT*RLPMSYKELDL
Trigger: CAAGTCCAACTCTTTATAAGACATAGGTAGACGTCAGGTCTGGAATGGAAGAGCCAACAGCAGTAGAAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000433112.5
ENST00000437356.7
ENST00000454545.5
ENST00000455479.5
CDS TCA 72 bp TCTTTCTCTGTCAATGTGACATGGATGTCCACCATCTaGCCCTTTTTCTTCCCTCGTGTGATGGTCCCAGTT +
Preference number: 6 (lower is better)
Translates to: SFSVNVTWMSTI*PFFFPRVMVPV
Trigger: AACTGGGACCATCACACGAGGGAAGAAAAAGGGTCAGATGGTGGACATCCATGTCACATTGACAGAGAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS CCA 72 bp TGGGAGTTTAGACCGTGGAGGTTTCTACTTCTTGGATaGGGTCCTTGTTGGAGAGAGTGCTTGAGATATTGT +
Preference number: 6 (lower is better)
Translates to: WEFRPWRFLLLG*GPCWRECLRYC
Trigger: ACAATATCTCAAGCACTCTCTCCAACAAGGACCCCATCCAAGAAGTAGAAACCTCCACGGTCTAAACTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS CAA 72 bp CTACTTCTTGGATGGGGTCCTTGTTGGAGAGAGTGCTaGAGATATTGTCGGATTCAAGCAACTCCACAATGC +
Preference number: 6 (lower is better)
Translates to: LLLGWGPCWREC*RYCRIQATPQC
Trigger: GCATTGTGGAGTTGCTTGAATCCGACAATATCTCAAGCACTCTCTCCAACAAGGACCCCATCCAAGAAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS TCA 72 bp TACTTCTTGGATGGGGTCCTTGTTGGAGAGAGTGCTTaGGATATTGTCGGATTCAAGCAACTCCACAATGCT +
Preference number: 6 (lower is better)
Translates to: YFLDGVLVGESA*DIVGFKQLHNA
Trigger: AGCATTGTGGAGTTGCTTGAATCCGACAATATCTCAAGCACTCTCTCCAACAAGGACCCCATCCAAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5
CDS GCA 72 bp TTTCTACTTCTTGGATGGGGTCCTTGTTGGAGAGAGTaGTTGAGATATTGTCGGATTCAAGCAACTCCACAA +
Preference number: 6 (lower is better)
Translates to: FLLLGWGPCWRE*LRYCRIQATPQ
Trigger: TTGTGGAGTTGCTTGAATCCGACAATATCTCAAGCACTCTCTCCAACAAGGACCCCATCCAAGAAGTAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295658.8
ENST00000406027.2
ENST00000437356.7
ENST00000454545.5