RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM158 (Homo sapiens)

Ensembl gene IDs: ENSG00000249992

Ensembl transcript IDs: ENST00000503771.2

Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTTCGGAACTGGAAGCGCAGCACAAACCTTGCTTTTCAAAGGCGCTaGGGTCTCTCGGCGGCCCCATCTCGGGAAGAGGAACTAACGATA +
Preference number: 1 (lower is better)
Translates to: FRNWKRSTNLAFQRR*GLSAAPSREEELTI
Trigger: TATCGTTAGTTCCTCTTCCCGAGATGGGGCCGCCGAGAGACCCCAGCGCCTTTGAAAAGCAAGGTTTGTGCTGCGCTTCCAGTTCCGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503771.2
3UTR GCA 90 bp TCTTCGGAGCTGCGATCCCACCCTCAGTCCAAGGGCTTAAACATCTaGTTTTCGGAACTGGAAGCGCAGCACAAACCTTGCTTTTCAAAG +
Preference number: 1 (lower is better)
Translates to: SSELRSHPQSKGLNI*FSELEAQHKPCFSK
Trigger: CTTTGAAAAGCAAGGTTTGTGCTGCGCTTCCAGTTCCGAAAAGCAGATGTTTAAGCCCTTGGACTGAGGGTGGGATCGCAGCTCCGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503771.2
3UTR CCA 72 bp TGGAAGCGCAGCACAAACCTTGCTTTTCAAAGGCGCTaGGGTCTCTCGGCGGCCCCATCTCGGGAAGAGGAA +
Preference number: 3 (lower is better)
Translates to: WKRSTNLAFQRR*GLSAAPSREEE
Trigger: TTCCTCTTCCCGAGATGGGGCCGCCGAGAGACCCCAGCGCCTTTGAAAAGCAAGGTTTGTGCTGCGCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503771.2
3UTR GCA 72 bp CTGCGATCCCACCCTCAGTCCAAGGGCTTAAACATCTaGTTTTCGGAACTGGAAGCGCAGCACAAACCTTGC +
Preference number: 3 (lower is better)
Translates to: LRSHPQSKGLNI*FSELEAQHKPC
Trigger: GCAAGGTTTGTGCTGCGCTTCCAGTTCCGAAAAGCAGATGTTTAAGCCCTTGGACTGAGGGTGGGATCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR GCA 90 bp CACCGGCCGAGTCTCCGGCGGGAAAGGCACCCGCGCGCGCGGACACAGGACGGAAAGAAAGCGCGGCCGTaGGCGTTGGTGGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: HRPSLRRERHPRARTQDGKKARP*ALVEKS
Trigger: GCTCTTCTCCACCAACGCGCACGGCCGCGCTTTCTT...TCCGTCCTGTGTCCGCGCGCGCGGGTGCCTTTCCCGCCGGAGACTCGGCCGGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR GCA 90 bp CAAAGGCGCTGGGGTCTCTCGGCGGCCCCATCTCGGGAAGAGGAACTAACGATATGCGGCGGGGGTGGCTaGGGTGGTGCTGGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: QRRWGLSAAPSREEELTICGGGG*GGAGGG
Trigger: ACCACCGCCAGCACCACCGCAGCCACCCCCGCCGCA...TATCGTTAGTTCCTCTTCCCGAGATGGGGCCGCCGAGAGACCCCAGCGCCTTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CCA 90 bp AAGGGCCCCATTTCCCTCCTCTCCGTCTTCGGAGCTGCGATCCCACCCTCAGTCAGCAGTAGGTCGCACTaGAAGCCCCGCGGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: KGPISLLSVFGAAIPPSVSSRSH*KPRGRP
Trigger: GGGCCGCCCGCGGGGCTTCCAGTGCGACCTACTGCT...GACTGAGGGTGGGATCGCAGCTCCGAAGACGGAGAGGAGGGAAATGGGGCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR TCA 90 bp CAAAGGCGCTGGGGTCTCTCGGCGGCCCCATCTCGGGAAGAGGAACTAACGATATGGGCACCGGCCAGATaGGGGCGGCCACGCTCCACA +
Preference number: 4 (lower is better)
Translates to: QRRWGLSAAPSREEELTIWAPAR*GRPRST
Trigger: TGTGGAGCGTGGCCGCCCTCATCTGGCCGGTGCCCA...TATCGTTAGTTCCTCTTCCCGAGATGGGGCCGCCGAGAGACCCCAGCGCCTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR TCA 90 bp TGGTCATTTTCTGCCATGAATCTAGGGCACGTGGGTGCGGGGAAGGAGTCGGGCTCTGCCGCTGCACGCTaGTGTTGCACGGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: WSFSAMNLGHVGAGKESGSAAAR*CCTAPP
Trigger: CGGCGGCGCCGTGCAACATCAGCGTGCAGCGGCAGA...GCCCGACTCCTTCCCCGCACCCACGTGCCCTAGATTCATGGCAGAAAATGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR GCA 90 bp AACTGGAAGCGCAGCACAAACCTTGCTTTTCAAAGGCGCTGGGGTCTCTCGGCGGGGTGGCTGCGGTGGTaGTGGCGGTGGTCCGGCGCT +
Preference number: 4 (lower is better)
Translates to: NWKRSTNLAFQRRWGLSAGWLRW*WRWSGA
Trigger: AGCGCCGGACCACCGCCAGCACCACCGCAGCCACCC...CGCCGAGAGACCCCAGCGCCTTTGAAAAGCAAGGTTTGTGCTGCGCTTCCAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CCA 90 bp GGGTCTCTCGGCGGCCCCATCTCGGGAAGAGGAACTAACGATAACTACAGCACGAGACCCGGTTGCGTTTaGGGTTCCCCGCCGCCCCCG +
Preference number: 4 (lower is better)
Translates to: GSLGGPISGRGTNDNYSTRPGCV*GSPPPP
Trigger: CGGGGGCGGCGGGGAACCCCAAACGCAACCGGGTCT...CGTGCTGTAGTTATCGTTAGTTCCTCTTCCCGAGATGGGGCCGCCGAGAGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR TCA 90 bp TCCCACCCTCAGTCCAAGGGCTTAAACATCTGCTTTTCGGAACTGGAAGCGCAGGCCCCAGGTGCTCGATaGGCAGCGGCGGCCCGACGC +
Preference number: 4 (lower is better)
Translates to: SHPQSKGLNICFSELEAQAPGAR*AAAARR
Trigger: GCGTCGGGCCGCCGCTGCTCATCGAGCACCTGGGGC...CTGCGCTTCCAGTTCCGAAAAGCAGATGTTTAAGCCCTTGGACTGAGGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR GCA 90 bp CAAAGGCGCTGGGGTCTCTCGGCGGCCCCATCTCGGGAAGAGGAACTAACGATATCTAGGGCACGTGGGTaGGGGGAAGGAGTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: QRRWGLSAAPSREEELTISRARG*GEGVGQ
Trigger: CTGCCCGACTCCTTCCCCGCACCCACGTGCCCTAGA...TATCGTTAGTTCCTCTTCCCGAGATGGGGCCGCCGAGAGACCCCAGCGCCTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR GCA 90 bp AACTGGAAGCGCAGCACAAACCTTGCTTTTCAAAGGCGCTGGGGTCTCTCGGCGCCCTCCAGACCCGGTTaGGTTTGGGGTTCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: NWKRSTNLAFQRRWGLSAPSRPG*VWGSPP
Trigger: CGGCGGGGAACCCCAAACGCAACCGGGTCTGGAGGG...CGCCGAGAGACCCCAGCGCCTTTGAAAAGCAAGGTTTGTGCTGCGCTTCCAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR GCA 90 bp ACAGCACGAAGCACACCGGCCGAGTCTCCGGCGGGAAAGGCACCCGCGCGCGCGAAGGGCTTAAACATCTaGTTTTCGGAACTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: TARSTPAESPAGKAPARAKGLNI*FSELEA
Trigger: CGCTTCCAGTTCCGAAAAGCAGATGTTTAAGCCCTT...CGCGCGCGCGGGTGCCTTTCCCGCCGGAGACTCGGCCGGTGTGCTTCGTGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CCA 90 bp TCCCACCCTCAGTCCAAGGGCTTAAACATCTGCTTTTCGGAACTGGAAGCGCAGCGAGCAGGGGCAGCATaGCCTGCGGCGGGCGCCTAC +
Preference number: 4 (lower is better)
Translates to: SHPQSKGLNICFSELEAQRAGAA*PAAGAY
Trigger: GTAGGCGCCCGCCGCAGGCCATGCTGCCCCTGCTCG...CTGCGCTTCCAGTTCCGAAAAGCAGATGTTTAAGCCCTTGGACTGAGGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CCA 90 bp CCATCTCGGGAAGAGGAACTAACGATAACTACAGCACGAAGCACACCGGCCGAGGGCGGCCCGACGCGGTaGAAGGCGGCGGCGAAGAAA +
Preference number: 4 (lower is better)
Translates to: PSREEELTITTARSTPAEGGPTR*KAAAKK
Trigger: TTTCTTCGCCGCCGCCTTCCACCGCGTCGGGCCGCC...CTCGGCCGGTGTGCTTCGTGCTGTAGTTATCGTTAGTTCCTCTTCCCGAGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CCA 90 bp GGGAAAGGGCCCCATTTCCCTCCTCTCCGTCTTCGGAGCTGCGATCCCACCCTCAGCAGGCCACCAGCGTaGACTCAATGGGCTTACGGT +
Preference number: 4 (lower is better)
Translates to: GKGPHFPPLRLRSCDPTLSRPPA*TQWAYG
Trigger: ACCGTAAGCCCATTGAGTCCACGCTGGTGGCCTGCT...GAGGGTGGGATCGCAGCTCCGAAGACGGAGAGGAGGGAAATGGGGCCCTTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CCA 90 bp CGGGAAGAGGAACTAACGATAACTACAGCACGAAGCACACCGGCCGAGTCTCCGTGGCTGCGGTGGTGCTaGCGGTGGTCCGGCGCTGTT +
Preference number: 4 (lower is better)
Translates to: REEELTITTARSTPAESPWLRWC*RWSGAV
Trigger: AACAGCGCCGGACCACCGCCAGCACCACCGCAGCCA...CGGAGACTCGGCCGGTGTGCTTCGTGCTGTAGTTATCGTTAGTTCCTCTTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CCA 90 bp CGAGTCTCCGGCGGGAAAGGCACCCGCGCGCGCGGACACAGGACGGACACAGGGACCAGGCCACGTCACTaGATAGATCAACTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: RVSGGKGTRARGHRTDTGTRPRH*IDQLGK
Trigger: TTTTCCAAGTTGATCTATCCAGTGACGTGGCCTGGT...CCCTGTGTCCGTCCTGTGTCCGCGCGCGCGGGTGCCTTTCCCGCCGGAGACTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CCA 90 bp TGGTCATTTTCTGCCATGAATCTAGGGCACGTGGGTGCGGGGAAGGAGTCGGGCCGCGGCCGTGCGCGTTaGTGGAGAAGAGCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: WSFSAMNLGHVGAGKESGRGRAR*WRRAVG
Trigger: ACCTACTGCTCTTCTCCACCAACGCGCACGGCCGCG...GCCCGACTCCTTCCCCGCACCCACGTGCCCTAGATTCATGGCAGAAAATGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR GCA 90 bp TTTCCCTCCTCTCCGTCTTCGGAGCTGCGATCCCACCCTCAGTCCAAGGGCTTAAGTCGGGCAGGGGGATaGAATAGAGGGGAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: FPSSPSSELRSHPQSKGLSRAGG*NRGERA
Trigger: GGCCCTTTCCCCTCTATTGCATCCCCCTGCCCGACT...TAAGCCCTTGGACTGAGGGTGGGATCGCAGCTCCGAAGACGGAGAGGAGGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CCA 90 bp CGGGAAGAGGAACTAACGATAACTACAGCACGAAGCACACCGGCCGAGTCTCCGGGCCGTGCGCGTTGGTaGAGAAGAGCAGTAGGTCGC +
Preference number: 4 (lower is better)
Translates to: REEELTITTARSTPAESPGRARW*RRAVGR
Trigger: GCGACCTACTGCTCTTCTCCACCAACGCGCACGGCC...CGGAGACTCGGCCGGTGTGCTTCGTGCTGTAGTTATCGTTAGTTCCTCTTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CCA 90 bp GCAATAGAGGGGAAAGGGCCCCATTTCCCTCCTCTCCGTCTTCGGAGCTGCGATCCAGCGTGGACTCAATaGGCTTACGGTTCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: AIEGKGPHFPPLRLRSCDPAWTQ*AYGSAA
Trigger: GGCGGCTGAACCGTAAGCCCATTGAGTCCACGCTGG...ATCGCAGCTCCGAAGACGGAGAGGAGGGAAATGGGGCCCTTTCCCCTCTATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CCA 90 bp ATCTCGGGAAGAGGAACTAACGATAACTACAGCACGAAGCACACCGGCCGAGTCCGGTGGTGCTGGCGGTaGTCCGGCGCTGTTCCATGC +
Preference number: 4 (lower is better)
Translates to: ISGRGTNDNYSTKHTGRVRWCWR*SGAVPC
Trigger: GCATGGAACAGCGCCGGACCACCGCCAGCACCACCG...GACTCGGCCGGTGTGCTTCGTGCTGTAGTTATCGTTAGTTCCTCTTCCCGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CCA 90 bp GGCGGCCCCATCTCGGGAAGAGGAACTAACGATAACTACAGCACGAAGCACACCGCTTTTCAAAGGCGCTaGGGTCTCTCGGCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GGPISGRGTNDNYSTKHTAFQRR*GLSAAP
Trigger: TGGGGCCGCCGAGAGACCCCAGCGCCTTTGAAAAGC...GGTGTGCTTCGTGCTGTAGTTATCGTTAGTTCCTCTTCCCGAGATGGGGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR GCA 90 bp ATCTCGGGAAGAGGAACTAACGATAACTACAGCACGAAGCACACCGGCCGAGTCTCCGGCGCTGTTCCATaGCGTTGGGCAGGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: ISGRGTNDNYSTKHTGRVSGAVP*RWAGSR
Trigger: CCGGCTTCCTGCCCAACGGCATGGAACAGCGCCGGA...GACTCGGCCGGTGTGCTTCGTGCTGTAGTTATCGTTAGTTCCTCTTCCCGAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR GCA 90 bp CCATCTCGGGAAGAGGAACTAACGATAACTACAGCACGAAGCACACCGGCCGAGCTCAGCATCTGCCGCTaGACGCTGATGTTGCACGGC +
Preference number: 4 (lower is better)
Translates to: PSREEELTITTARSTPAELSICR*TLMLHG
Trigger: GCCGTGCAACATCAGCGTGCAGCGGCAGATGCTGAG...CTCGGCCGGTGTGCTTCGTGCTGTAGTTATCGTTAGTTCCTCTTCCCGAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR GCA 90 bp CGGGAAGAGGAACTAACGATAACTACAGCACGAAGCACACCGGCCGAGTCTCCGAGCGAGCTCAGCATCTaGCGCTGCACGCTGATGTTG +
Preference number: 4 (lower is better)
Translates to: REEELTITTARSTPAESPSELSI*RCTLML
Trigger: CAACATCAGCGTGCAGCGGCAGATGCTGAGCTCGCT...CGGAGACTCGGCCGGTGTGCTTCGTGCTGTAGTTATCGTTAGTTCCTCTTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR GCA 90 bp CCATCTCGGGAAGAGGAACTAACGATAACTACAGCACGAAGCACACCGGCCGAGCTCCGTCTTCGGAGCTaGGATCCCACCCTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: PSREEELTITTARSTPAELRLRS*DPTLSP
Trigger: TGGACTGAGGGTGGGATCGCAGCTCCGAAGACGGAG...CTCGGCCGGTGTGCTTCGTGCTGTAGTTATCGTTAGTTCCTCTTCCCGAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR TCA 90 bp CCCTCAGTCCAAGGGCTTAAACATCTGCTTTTCGGAACTGGAAGCGCAGCACAAGGAGGACGCGTTGACTaGAGCATTGGAGGGCACCCC +
Preference number: 4 (lower is better)
Translates to: PSVQGLKHLLFGTGSAAQGGRVD*SIGGHP
Trigger: GGGGTGCCCTCCAATGCTTCAGTCAACGCGTCCTCC...TTGTGCTGCGCTTCCAGTTCCGAAAAGCAGATGTTTAAGCCCTTGGACTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR TCA 90 bp CCCTCAGTCCAAGGGCTTAAACATCTGCTTTTCGGAACTGGAAGCGCAGCACAACCGCGGAGGACGCGTTaGCTGAAGCATTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PSVQGLKHLLFGTGSAAQPRRTR*LKHWRA
Trigger: TGCCCTCCAATGCTTCAGTCAACGCGTCCTCCGCGG...TTGTGCTGCGCTTCCAGTTCCGAAAAGCAGATGTTTAAGCCCTTGGACTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR GCA 90 bp CCATCTCGGGAAGAGGAACTAACGATAACTACAGCACGAAGCACACCGGCCGAGGCGCAGCACAAACCTTaGTTTTCAAAGGCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PSREEELTITTARSTPAEAQHKP*FSKALG
Trigger: CCCCAGCGCCTTTGAAAAGCAAGGTTTGTGCTGCGC...CTCGGCCGGTGTGCTTCGTGCTGTAGTTATCGTTAGTTCCTCTTCCCGAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CCA 90 bp TTTCCCTCCTCTCCGTCTTCGGAGCTGCGATCCCACCCTCAGTCCAAGGGCTTATCTGCTTTTCGGAACTaGAAGCGCAGCACAAACCTT +
Preference number: 4 (lower is better)
Translates to: FPSSPSSELRSHPQSKGLSAFRN*KRSTNL
Trigger: AAGGTTTGTGCTGCGCTTCCAGTTCCGAAAAGCAGA...TAAGCCCTTGGACTGAGGGTGGGATCGCAGCTCCGAAGACGGAGAGGAGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR GCA 90 bp CAAGAAGAAACGCCCACCAGGCCACGTCACTGGATAGATCAACTTGGAAAAGGTGATTTGGTCATTTTCTaGCATGAATCTAGGGCACGT +
Preference number: 4 (lower is better)
Translates to: QEETPTRPRHWIDQLGKGDLVIF*HESRAR
Trigger: ACGTGCCCTAGATTCATGGCAGAAAATGACCAAATC...ACCTTTTCCAAGTTGATCTATCCAGTGACGTGGCCTGGTGGGCGTTTCTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CCA 90 bp AGTACAAGAAGAAACGCCCACCAGGCCACGTCACTGGATAGATCAACTTGGAAACAAATACACAGGATTTaGTCATTTTCTGCCATGAAT +
Preference number: 4 (lower is better)
Translates to: STRRNAHQATSLDRSTWKQIHRI*SFSAMN
Trigger: ATTCATGGCAGAAAATGACCAAATCCTGTGTATTTG...TTTCCAAGTTGATCTATCCAGTGACGTGGCCTGGTGGGCGTTTCTTCTTGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS TCA 90 bp ACACAGGGAGGAGCGGAGCGGGTCACTTGGTCGCCACCCCCGAAGTaGCGGCCGCGGCGGCGGCGGCAGCGGCGGCGGCGGCGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: TQGGAERVTWSPPPK*RPRRRRQRRRRRRL
Trigger: CAGCCGCCGCCGCCGCCGCCGCTGCCGCCGCCGCCGCGGCCGTCACTTCGGGGGTGGCGACCAAGTGACCCGCTCCGCTCCTCCCTGTGT
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS GCA 90 bp CAGAGGCGCAGGTCCTGCTGCGCGCCGCCCGCCGCCAGCCCCAGGTaGTCGATGAGCAGCGGCGGCCCGACGCGGTGGAAGGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: QRRRSCCAPPAASPR*SMSSGGPTRWKAAA
Trigger: CGCCGCCGCCTTCCACCGCGTCGGGCCGCCGCTGCTCATCGAGCACCTGGGGCTGGCGGCGGGCGGCGCGCAGCAGGACCTGCGCCTCTG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS GCA 90 bp CGACCGCGCACCCAGCCGCAGCCCACGCAGAGGCGCAGGTCCTGCTaGGCGCCGCCCGCCGCCAGCCCCAGGTGCTCGATGAGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: RPRTQPQPTQRRRSC*APPAASPRCSMSSG
Trigger: GCCGCTGCTCATCGAGCACCTGGGGCTGGCGGCGGGCGGCGCGCAGCAGGACCTGCGCCTCTGCGTGGGCTGCGGCTGGGTGCGCGGTCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS GCA 90 bp CGGCGACCGCGCACCCAGCCGCAGCCCACGCAGAGGCGCAGGTCCTaGTGCGCGCCGCCCGCCGCCAGCCCCAGGTGCTCGATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: RRPRTQPQPTQRRRS*CAPPAASPRCSMSS
Trigger: GCTGCTCATCGAGCACCTGGGGCTGGCGGCGGGCGGCGCGCAGCAGGACCTGCGCCTCTGCGTGGGCTGCGGCTGGGTGCGCGGTCGCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS CCA 90 bp CGGCGGCGGCGGCTGCGGTGGTCCCTGCGGGCACTGCGGCGGGGGTaGCTGCGGTGGTGCTGGCGGTGGTCCGGCGCTGTTCCATGCCGT +
Preference number: 5 (lower is better)
Translates to: RRRRLRWSLRALRRG*LRWCWRWSGAVPCR
Trigger: ACGGCATGGAACAGCGCCGGACCACCGCCAGCACCACCGCAGCCACCCCCGCCGCAGTGCCCGCAGGGACCACCGCAGCCGCCGCCGCCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS GCA 90 bp CGCGGGCGGCCCCAGCGCACGAGCAGCGAGCTCAGCATCTGCCGCTaGACGCTGATGTTGCACGGCGCCGCCGCCGCCGCCGCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RGRPQRTSSELSICR*TLMLHGAAAAAASS
Trigger: GGAGGAGGCGGCGGCGGCGGCGGCGCCGTGCAACATCAGCGTGCAGCGGCAGATGCTGAGCTCGCTGCTCGTGCGCTGGGGCCGCCCGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS TCA 90 bp CAGCAGCCGCGGGGCGATGGGCTCGTCCGCGGAGGACGCGTTGACTaGAGCATTGGAGGGCACCCCGAGGAGGCCGGGCGCGTCCGCGGC +
Preference number: 5 (lower is better)
Translates to: QQPRGDGLVRGGRVD*SIGGHPEEAGRVRG
Trigger: GCCGCGGACGCGCCCGGCCTCCTCGGGGTGCCCTCCAATGCTTCAGTCAACGCGTCCTCCGCGGACGAGCCCATCGCCCCGCGGCTGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS CCA 90 bp GCCGCCAGCCCCAGGTGCTCGATGAGCAGCGGCGGCCCGACGCGGTaGAAGGCGGCGGCGAAGAAAGCGCGGCCGTGCGCGTTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: AASPRCSMSSGGPTR*KAAAKKARPCALVE
Trigger: CTCCACCAACGCGCACGGCCGCGCTTTCTTCGCCGCCGCCTTCCACCGCGTCGGGCCGCCGCTGCTCATCGAGCACCTGGGGCTGGCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS TCA 90 bp AGGCCAGCAGCCGCGGGGCGATGGGCTCGTCCGCGGAGGACGCGTTaGCTGAAGCATTGGAGGGCACCCCGAGGAGGCCGGGCGCGTCCG +
Preference number: 5 (lower is better)
Translates to: RPAAAGRWARPRRTR*LKHWRAPRGGRARP
Trigger: CGGACGCGCCCGGCCTCCTCGGGGTGCCCTCCAATGCTTCAGTCAACGCGTCCTCCGCGGACGAGCCCATCGCCCCGCGGCTGCTGGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS CCA 90 bp CGCGGTGGAAGGCGGCGGCGAAGAAAGCGCGGCCGTGCGCGTTGGTaGAGAAGAGCAGTAGGTCGCACTGGAAGCCCCGCGGGCGGCCCC +
Preference number: 5 (lower is better)
Translates to: RGGRRRRRKRGRARW*RRAVGRTGSPAGGP
Trigger: GGGGCCGCCCGCGGGGCTTCCAGTGCGACCTACTGCTCTTCTCCACCAACGCGCACGGCCGCGCTTTCTTCGCCGCCGCCTTCCACCGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS GCA 90 bp GGCGGCCCGACGCGGTGGAAGGCGGCGGCGAAGAAAGCGCGGCCGTaGGCGTTGGTGGAGAAGAGCAGTAGGTCGCACTGGAAGCCCCGC +
Preference number: 5 (lower is better)
Translates to: GGPTRWKAAAKKARP*ALVEKSSRSHWKPR
Trigger: GCGGGGCTTCCAGTGCGACCTACTGCTCTTCTCCACCAACGCGCACGGCCGCGCTTTCTTCGCCGCCGCCTTCCACCGCGTCGGGCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS CCA 90 bp CGACGCGGTGGAAGGCGGCGGCGAAGAAAGCGCGGCCGTGCGCGTTaGTGGAGAAGAGCAGTAGGTCGCACTGGAAGCCCCGCGGGCGGC +
Preference number: 5 (lower is better)
Translates to: RRGGRRRRRKRGRAR*WRRAVGRTGSPAGG
Trigger: GCCGCCCGCGGGGCTTCCAGTGCGACCTACTGCTCTTCTCCACCAACGCGCACGGCCGCGCTTTCTTCGCCGCCGCCTTCCACCGCGTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS CCA 90 bp AAAGCGCGGCCGTGCGCGTTGGTGGAGAAGAGCAGTAGGTCGCACTaGAAGCCCCGCGGGCGGCCCCAGCGCACGAGCAGCGAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: KARPCALVEKSSRSH*KPRGRPQRTSSELS
Trigger: GCTGAGCTCGCTGCTCGTGCGCTGGGGCCGCCCGCGGGGCTTCCAGTGCGACCTACTGCTCTTCTCCACCAACGCGCACGGCCGCGCTTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CAA 90 bp GAGTCTCCGGCGGGAAAGGCACCCGCGCGCGCGGACACAGGACGGACACAGGGATCCCTCCAGACCCGGTaGCGTTTGGGGTTCCCCGCC +
Preference number: 5 (lower is better)
Translates to: ESPAGKAPARADTGRTQGSLQTR*RLGFPA
Trigger: GGCGGGGAACCCCAAACGCAACCGGGTCTGGAGGGA...TCCCTGTGTCCGTCCTGTGTCCGCGCGCGCGGGTGCCTTTCCCGCCGGAGACTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CAA 90 bp ATAACTACAGCACGAAGCACACCGGCCGAGTCTCCGGCGGGAAAGGCACCCGCGCGCTGCACGCTGATGTaGCACGGCGCCGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: ITTARSTPAESPAGKAPARCTLM*HGAAAA
Trigger: GGCGGCGGCGGCGCCGTGCAACATCAGCGTGCAGCG...CGCGGGTGCCTTTCCCGCCGGAGACTCGGCCGGTGTGCTTCGTGCTGTAGTTAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CAA 90 bp CACCGGCCGAGTCTCCGGCGGGAAAGGCACCCGCGCGCGCGGACACAGGACGGAAGCGCAGCACAAACCTaGCTTTTCAAAGGCGCTGGG +
Preference number: 5 (lower is better)
Translates to: HRPSLRRERHPRARTQDGSAAQT*LFKGAG
Trigger: CCCAGCGCCTTTGAAAAGCAAGGTTTGTGCTGCGCT...TCCGTCCTGTGTCCGCGCGCGCGGGTGCCTTTCCCGCCGGAGACTCGGCCGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CAA 90 bp ATAACTACAGCACGAAGCACACCGGCCGAGTCTCCGGCGGGAAAGGCACCCGCGGCGCGGCCGTGCGCGTaGGTGGAGAAGAGCAGTAGG +
Preference number: 5 (lower is better)
Translates to: ITTARSTPAESPAGKAPAARPCA*VEKSSR
Trigger: CCTACTGCTCTTCTCCACCAACGCGCACGGCCGCGC...CGCGGGTGCCTTTCCCGCCGGAGACTCGGCCGGTGTGCTTCGTGCTGTAGTTAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CAA 90 bp ATAACTACAGCACGAAGCACACCGGCCGAGTCTCCGGCGGGAAAGGCACCCGCGTCCGCGGAGGACGCGTaGACTGAAGCATTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: ITTARSTPAESPAGKAPASAEDA*TEALEG
Trigger: GCCCTCCAATGCTTCAGTCAACGCGTCCTCCGCGGA...CGCGGGTGCCTTTCCCGCCGGAGACTCGGCCGGTGTGCTTCGTGCTGTAGTTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CAA 90 bp TGGTCATTTTCTGCCATGAATCTAGGGCACGTGGGTGCGGGGAAGGAGTCGGGCAGCGGAGCGGGTCACTaGGTCGCCACCCCCGAAGTG +
Preference number: 5 (lower is better)
Translates to: WSFSAMNLGHVGAGKESGSGAGH*VATPEV
Trigger: CACTTCGGGGGTGGCGACCAAGTGACCCGCTCCGCT...GCCCGACTCCTTCCCCGCACCCACGTGCCCTAGATTCATGGCAGAAAATGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CAA 90 bp ATCTCGGGAAGAGGAACTAACGATAACTACAGCACGAAGCACACCGGCCGAGTCCAGACCCGGTTGCGTTaGGGGTTCCCCGCCGCCCCC +
Preference number: 5 (lower is better)
Translates to: ISGRGTNDNYSTKHTGRVQTRLR*GFPAAP
Trigger: GGGGGCGGCGGGGAACCCCAAACGCAACCGGGTCTG...GACTCGGCCGGTGTGCTTCGTGCTGTAGTTATCGTTAGTTCCTCTTCCCGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CAA 90 bp CAAAGGCGCTGGGGTCTCTCGGCGGCCCCATCTCGGGAAGAGGAACTAACGATAGCGTTGACTGAAGCATaGGAGGGCACCCCGAGGAGG +
Preference number: 5 (lower is better)
Translates to: QRRWGLSAAPSREEELTIALTEA*EGTPRR
Trigger: CCTCCTCGGGGTGCCCTCCAATGCTTCAGTCAACGC...TATCGTTAGTTCCTCTTCCCGAGATGGGGCCGCCGAGAGACCCCAGCGCCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CAA 90 bp AAACATCTGCTTTTCGGAACTGGAAGCGCAGCACAAACCTTGCTTTTCAAAGGCCGCTGTTCCATGCCGTaGGGCAGGAAGCCGGCGATG +
Preference number: 5 (lower is better)
Translates to: KHLLFGTGSAAQTLLFKGRCSMP*GRKPAM
Trigger: CATCGCCGGCTTCCTGCCCAACGGCATGGAACAGCG...GCCTTTGAAAAGCAAGGTTTGTGCTGCGCTTCCAGTTCCGAAAAGCAGATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS-3UTR CAA 90 bp ATAACTACAGCACGAAGCACACCGGCCGAGTCTCCGGCGGGAAAGGCACCCGCGACAAATACACAGGATTaGGTCATTTTCTGCCATGAA +
Preference number: 5 (lower is better)
Translates to: ITTARSTPAESPAGKAPATNTQD*VIFCHE
Trigger: TTCATGGCAGAAAATGACCAAATCCTGTGTATTTGT...CGCGGGTGCCTTTCCCGCCGGAGACTCGGCCGGTGTGCTTCGTGCTGTAGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS CAA 90 bp AGCATGGCCTGCGGCGGGCGCCTACGCGCGCGAGGCCGGCGGCGGTaGCATGGCGAGCGGGCGACGGGCCGGCGAGCTCACGGTGGGACC +
Preference number: 6 (lower is better)
Translates to: SMACGGRLRARGRRR*HGERATGRRAHGGT
Trigger: GGTCCCACCGTGAGCTCGCCGGCCCGTCGCCCGCTCGCCATGCAACCGCCGCCGGCCTCGCGCGCGTAGGCGCCCGCCGCAGGCCATGCT
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS CCA 72 bp CCCAGGTGCTCGATGAGCAGCGGCGGCCCGACGCGGTaGAAGGCGGCGGCGAAGAAAGCGCGGCCGTGCGCG +
Preference number: 6 (lower is better)
Translates to: PRCSMSSGGPTR*KAAAKKARPCA
Trigger: CGCGCACGGCCGCGCTTTCTTCGCCGCCGCCTTCCACCGCGTCGGGCCGCCGCTGCTCATCGAGCACCTGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS CCA 72 bp CTGCGGGCACTGCGGCGGGGGTGGCTGCGGTGGTGCTaGCGGTGGTCCGGCGCTGTTCCATGCCGTTGGGCA +
Preference number: 6 (lower is better)
Translates to: LRALRRGWLRWC*RWSGAVPCRWA
Trigger: TGCCCAACGGCATGGAACAGCGCCGGACCACCGCCAGCACCACCGCAGCCACCCCCGCCGCAGTGCCCGCAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS CAA 72 bp AGCAGCGAGCTCAGCATCTGCCGCTGCACGCTGATGTaGCACGGCGCCGCCGCCGCCGCCGCCTCCTCCGGG +
Preference number: 6 (lower is better)
Translates to: SSELSICRCTLM*HGAAAAAASSG
Trigger: CCCGGAGGAGGCGGCGGCGGCGGCGGCGCCGTGCAACATCAGCGTGCAGCGGCAGATGCTGAGCTCGCTGCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS CAA 90 bp GAGGCCAGCAGCCGCGGGGCGATGGGCTCGTCCGCGGAGGACGCGTaGACTGAAGCATTGGAGGGCACCCCGAGGAGGCCGGGCGCGTCC +
Preference number: 6 (lower is better)
Translates to: EASSRGAMGSSAEDA*TEALEGTPRRPGAS
Trigger: GGACGCGCCCGGCCTCCTCGGGGTGCCCTCCAATGCTTCAGTCAACGCGTCCTCCGCGGACGAGCCCATCGCCCCGCGGCTGCTGGCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS TCA 72 bp CGGGGCGATGGGCTCGTCCGCGGAGGACGCGTTGACTaGAGCATTGGAGGGCACCCCGAGGAGGCCGGGCGC +
Preference number: 6 (lower is better)
Translates to: RGDGLVRGGRVD*SIGGHPEEAGR
Trigger: GCGCCCGGCCTCCTCGGGGTGCCCTCCAATGCTTCAGTCAACGCGTCCTCCGCGGACGAGCCCATCGCCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS TCA 72 bp GCCGCGGGGCGATGGGCTCGTCCGCGGAGGACGCGTTaGCTGAAGCATTGGAGGGCACCCCGAGGAGGCCGG +
Preference number: 6 (lower is better)
Translates to: AAGRWARPRRTR*LKHWRAPRGGR
Trigger: CCGGCCTCCTCGGGGTGCCCTCCAATGCTTCAGTCAACGCGTCCTCCGCGGACGAGCCCATCGCCCCGCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS TCA 72 bp GCACGAGCAGCGAGCTCAGCATCTGCCGCTGCACGCTaGTGTTGCACGGCGCCGCCGCCGCCGCCGCCTCCT +
Preference number: 6 (lower is better)
Translates to: ARAASSASAAAR*CCTAPPPPPPP
Trigger: AGGAGGCGGCGGCGGCGGCGGCGCCGTGCAACATCAGCGTGCAGCGGCAGATGCTGAGCTCGCTGCTCGTGC
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS GCA 72 bp CTGAAGTCTAGGCAGCAGAAATGCAGCGGCTCGCCCTaGAGCCACAGCGGCCCGGGCGGCTCGGCCGCGGGG +
Preference number: 6 (lower is better)
Translates to: LKSRQQKCSGSP*SHSGPGGSAAG
Trigger: CCCCGCGGCCGAGCCGCCCGGGCCGCTGTGGCTGCAGGGCGAGCCGCTGCATTTCTGCTGCCTAGACTTCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS CAA 90 bp CCGACGCGGTGGAAGGCGGCGGCGAAGAAAGCGCGGCCGTGCGCGTaGGTGGAGAAGAGCAGTAGGTCGCACTGGAAGCCCCGCGGGCGG +
Preference number: 6 (lower is better)
Translates to: PTRWKAAAKKARPCA*VEKSSRSHWKPRGR
Trigger: CCGCCCGCGGGGCTTCCAGTGCGACCTACTGCTCTTCTCCACCAACGCGCACGGCCGCGCTTTCTTCGCCGCCGCCTTCCACCGCGTCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS CCA 72 bp CCGTGCGCGTTGGTGGAGAAGAGCAGTAGGTCGCACTaGAAGCCCCGCGGGCGGCCCCAGCGCACGAGCAGC +
Preference number: 6 (lower is better)
Translates to: PCALVEKSSRSH*KPRGRPQRTSS
Trigger: GCTGCTCGTGCGCTGGGGCCGCCCGCGGGGCTTCCAGTGCGACCTACTGCTCTTCTCCACCAACGCGCACGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS CAA 72 bp ATGGGCTCGTCCGCGGAGGACGCGTTGACTGAAGCATaGGAGGGCACCCCGAGGAGGCCGGGCGCGTCCGCG +
Preference number: 6 (lower is better)
Translates to: MGSSAEDALTEA*EGTPRRPGASA
Trigger: CGCGGACGCGCCCGGCCTCCTCGGGGTGCCCTCCAATGCTTCAGTCAACGCGTCCTCCGCGGACGAGCCCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS CAA 72 bp AGCCGCGGGGCGATGGGCTCGTCCGCGGAGGACGCGTaGACTGAAGCATTGGAGGGCACCCCGAGGAGGCCG +
Preference number: 6 (lower is better)
Translates to: SRGAMGSSAEDA*TEALEGTPRRP
Trigger: CGGCCTCCTCGGGGTGCCCTCCAATGCTTCAGTCAACGCGTCCTCCGCGGACGAGCCCATCGCCCCGCGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS CAA 90 bp GTGGCTGCGGTGGTGCTGGCGGTGGTCCGGCGCTGTTCCATGCCGTaGGGCAGGAAGCCGGCGATGATGGGCACCGGCCAGATGAGGGCG +
Preference number: 6 (lower is better)
Translates to: VAAVVLAVVRRCSMP*GRKPAMMGTGQMRA
Trigger: CGCCCTCATCTGGCCGGTGCCCATCATCGCCGGCTTCCTGCCCAACGGCATGGAACAGCGCCGGACCACCGCCAGCACCACCGCAGCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS CAA 72 bp GTGGTGCTGGCGGTGGTCCGGCGCTGTTCCATGCCGTaGGGCAGGAAGCCGGCGATGATGGGCACCGGCCAG +
Preference number: 6 (lower is better)
Translates to: VVLAVVRRCSMP*GRKPAMMGTGQ
Trigger: CTGGCCGGTGCCCATCATCGCCGGCTTCCTGCCCAACGGCATGGAACAGCGCCGGACCACCGCCAGCACCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS CCA 72 bp AGGCGGCGGCGAAGAAAGCGCGGCCGTGCGCGTTGGTaGAGAAGAGCAGTAGGTCGCACTGGAAGCCCCGCG +
Preference number: 6 (lower is better)
Translates to: RRRRRKRGRARW*RRAVGRTGSPA
Trigger: CGCGGGGCTTCCAGTGCGACCTACTGCTCTTCTCCACCAACGCGCACGGCCGCGCTTTCTTCGCCGCCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS GCA 72 bp ACGCGGTGGAAGGCGGCGGCGAAGAAAGCGCGGCCGTaGGCGTTGGTGGAGAAGAGCAGTAGGTCGCACTGG +
Preference number: 6 (lower is better)
Translates to: TRWKAAAKKARP*ALVEKSSRSHW
Trigger: CCAGTGCGACCTACTGCTCTTCTCCACCAACGCGCACGGCCGCGCTTTCTTCGCCGCCGCCTTCCACCGCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS CCA 72 bp GGAAGGCGGCGGCGAAGAAAGCGCGGCCGTGCGCGTTaGTGGAGAAGAGCAGTAGGTCGCACTGGAAGCCCC +
Preference number: 6 (lower is better)
Translates to: GRRRRRKRGRAR*WRRAVGRTGSP
Trigger: GGGGCTTCCAGTGCGACCTACTGCTCTTCTCCACCAACGCGCACGGCCGCGCTTTCTTCGCCGCCGCCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503771.2
CDS CAA 72 bp TGGAAGGCGGCGGCGAAGAAAGCGCGGCCGTGCGCGTaGGTGGAGAAGAGCAGTAGGTCGCACTGGAAGCCC +
Preference number: 6 (lower is better)
Translates to: WKAAAKKARPCA*VEKSSRSHWKP
Trigger: GGGCTTCCAGTGCGACCTACTGCTCTTCTCCACCAACGCGCACGGCCGCGCTTTCTTCGCCGCCGCCTTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503771.2