Pregenerated sensors for TMEM156 (Homo sapiens)
Ensembl gene IDs: ENSG00000121895Ensembl transcript IDs: ENST00000344606.6, ENST00000372489.2, ENST00000381938.4, ENST00000495029.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTAGTTTTCATCAACCAGTCAGCATTCCTCCTGCTTTCCAACTGTaGATCCTCAGCTGGACACAAACATTTTCCAGTCTACTCATTCAC | + |
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Preference number: 1 (lower is better) Translates to: ASFHQPVSIPPAFQL*ILSWTQTFSSLLIH Trigger: GTGAATGAGTAGACTGGAAAATGTTTGTGTCCAGCTGAGGATGCACAGTTGGAAAGCAGGAGGAATGCTGACTGGTTGATGAAAACTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| 3UTR-3UTR GCA 90 bp | ATGGCTTCTTGCAAACACTCTTGTTCCCTTGATCTCATGGAGCGAATGAATGCTCCTGCTTTCCAACTGTaGATCCTCAGCTGGACACAA | + |
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Preference number: 2 (lower is better) Translates to: MASCKHSCSLDLMERMNAPAFQL*ILSWTQ Trigger: TTGTGTCCAGCTGAGGATGCACAGTTGGAAAGCAGG...AGCATTCATTCGCTCCATGAGATCAAGGGAACAAGAGTGTTTGCAAGAAGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| 3UTR-3UTR GCA 90 bp | CCTCAGCTGGACACAAACATTTTCCAGTCTACTCATTCACAAAATAAACTTCTGGGGCTCGGTCCAACTTaGCCGGGGATATTCGTGTAT | + |
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Preference number: 2 (lower is better) Translates to: PQLDTNIFQSTHSQNKLLGLGPT*PGIFVY Trigger: ATACACGAATATCCCCGGGCAAGTTGGACCGAGCCC...CAGAAGTTTATTTTGTGAATGAGTAGACTGGAAAATGTTTGTGTCCAGCTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| 3UTR-3UTR CCA 90 bp | GGATGGTCTCGATCCCTTGACCTCATGATCCTCCCACCTCAGAATCCCAAAGTGTCAAAATTAAAAACTTaGCTCCACTCTGTGCTGTAT | + |
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Preference number: 2 (lower is better) Translates to: GWSRSLDLMILPPQNPKVSKLKT*LHSVLY Trigger: ATACAGCACAGAGTGGAGCCAAGTTTTTAATTTTGA...CACTTTGGGATTCTGAGGTGGGAGGATCATGAGGTCAAGGGATCGAGACCATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| 3UTR-3UTR CAA 90 bp | ATGGCTTCTTGCAAACACTCTTGTTCCCTTGATCTCATGGAGCGAATGAATGCTAGGGCTCGGTCCAACTaGCCCGGGGATATTCGTGTA | + |
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Preference number: 3 (lower is better) Translates to: MASCKHSCSLDLMERMNARARSN*PGDIRV Trigger: TACACGAATATCCCCGGGCAAGTTGGACCGAGCCCT...AGCATTCATTCGCTCCATGAGATCAAGGGAACAAGAGTGTTTGCAAGAAGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| 3UTR GCA 72 bp | CATCAACCAGTCAGCATTCCTCCTGCTTTCCAACTGTaGATCCTCAGCTGGACACAAACATTTTCCAGTCTA | + |
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Preference number: 3 (lower is better) Translates to: HQPVSIPPAFQL*ILSWTQTFSSL Trigger: TAGACTGGAAAATGTTTGTGTCCAGCTGAGGATGCACAGTTGGAAAGCAGGAGGAATGCTGACTGGTTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR CCA 90 bp | GGATGGTCTCGATCCCTTGACCTCATGATCCTCCCACCTCAGAATCCCAAAGTGCCATGTTGGCCAGGATaGTCTCGATCCCTTGACCTC | + |
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Preference number: 4 (lower is better) Translates to: GWSRSLDLMILPPQNPKVPCWPG*SRSLDL Trigger: GAGGTCAAGGGATCGAGACCATCCTGGCCAACATGG...CACTTTGGGATTCTGAGGTGGGAGGATCATGAGGTCAAGGGATCGAGACCATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR GCA 90 bp | GGATGGTCTCGATCCCTTGACCTCATGATCCTCCCACCTCAGAATCCCAAAGTGTCCAAAGGCAGCCTCTaGGTGGTCTCTGCTGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: GWSRSLDLMILPPQNPKVSKGSL*VVSAER Trigger: TCTTTCAGCAGAGACCACGCAGAGGCTGCCTTTGGA...CACTTTGGGATTCTGAGGTGGGAGGATCATGAGGTCAAGGGATCGAGACCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR CCA 90 bp | GGATGGTCTCGATCCCTTGACCTCATGATCCTCCCACCTCAGAATCCCAAAGTGAAGGCAGCCTCTGCGTaGTCTCTGCTGAAAGAACCT | + |
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Preference number: 4 (lower is better) Translates to: GWSRSLDLMILPPQNPKVKAASA*SLLKEP Trigger: AGGTTCTTTCAGCAGAGACCACGCAGAGGCTGCCTT...CACTTTGGGATTCTGAGGTGGGAGGATCATGAGGTCAAGGGATCGAGACCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR TCA 90 bp | GGATGGTCTCGATCCCTTGACCTCATGATCCTCCCACCTCAGAATCCCAAAGTGCTTGGCAAGTCCTGGTaGAGTTACGAAAATTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GWSRSLDLMILPPQNPKVLGKSW*SYENWR Trigger: CCTCCAATTTTCGTAACTTCACCAGGACTTGCCAAG...CACTTTGGGATTCTGAGGTGGGAGGATCATGAGGTCAAGGGATCGAGACCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR GCA 90 bp | GGATGGTCTCGATCCCTTGACCTCATGATCCTCCCACCTCAGAATCCCAAAGTGAGTCAGCATTCCTCCTaGTTTCCAACTGTGCATCCT | + |
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Preference number: 4 (lower is better) Translates to: GWSRSLDLMILPPQNPKVSQHSS*FPTVHP Trigger: AGGATGCACAGTTGGAAAGCAGGAGGAATGCTGACT...CACTTTGGGATTCTGAGGTGGGAGGATCATGAGGTCAAGGGATCGAGACCATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR GCA 90 bp | CATCAACCAGTCAGCATTCCTCCTGCTTTCCAACTGTGCATCCTCAGCTGGACAACTGCAAACTCTGCCTaGCAGGTTCAAGTGATTCTC | + |
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Preference number: 4 (lower is better) Translates to: HQPVSIPPAFQLCILSWTTANSA*QVQVIL Trigger: GAGAATCACTTGAACCTGGCAGGCAGAGTTTGCAGT...TGTCCAGCTGAGGATGCACAGTTGGAAAGCAGGAGGAATGCTGACTGGTTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR TCA 90 bp | CATCAACCAGTCAGCATTCCTCCTGCTTTCCAACTGTGCATCCTCAGCTGGACAGTAGGTTTGTCTCTATaGCTCTGCCACTTTTGCACT | + |
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Preference number: 4 (lower is better) Translates to: HQPVSIPPAFQLCILSWTVGLSL*LCHFCT Trigger: AGTGCAAAAGTGGCAGAGTCATAGAGACAAACCTAC...TGTCCAGCTGAGGATGCACAGTTGGAAAGCAGGAGGAATGCTGACTGGTTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR GCA 90 bp | ATGGCTTCTTGCAAACACTCTTGTTCCCTTGATCTCATGGAGCGAATGAATGCTGGGCTCGGTCCAACTTaGCCGGGGATATTCGTGTAT | + |
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Preference number: 4 (lower is better) Translates to: MASCKHSCSLDLMERMNAGLGPT*PGIFVY Trigger: ATACACGAATATCCCCGGGCAAGTTGGACCGAGCCC...AGCATTCATTCGCTCCATGAGATCAAGGGAACAAGAGTGTTTGCAAGAAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR CCA 90 bp | GGATGGTCTCGATCCCTTGACCTCATGATCCTCCCACCTCAGAATCCCAAAGTGTTATATTCCTCCAAGTaGTCAACCAGAGGAGCTACA | + |
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Preference number: 4 (lower is better) Translates to: GWSRSLDLMILPPQNPKVLYSSK*STRGAT Trigger: TGTAGCTCCTCTGGTTGACCACTTGGAGGAATATAA...CACTTTGGGATTCTGAGGTGGGAGGATCATGAGGTCAAGGGATCGAGACCATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR CCA 90 bp | CATCAACCAGTCAGCATTCCTCCTGCTTTCCAACTGTGCATCCTCAGCTGGACACGATTTCTCCTTGCTTaGCTCATCCTCCATGATTGT | + |
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Preference number: 4 (lower is better) Translates to: HQPVSIPPAFQLCILSWTRFLLA*LILHDC Trigger: ACAATCATGGAGGATGAGCCAAGCAAGGAGAAATCG...TGTCCAGCTGAGGATGCACAGTTGGAAAGCAGGAGGAATGCTGACTGGTTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR GCA 90 bp | GCTAGTTTTCATCAACCAGTCAGCATTCCTCCTGCTTTCCAACTGTGCATCCTCGTTCACTGCAAACTCTaGCTGCCAGGTTCAAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: ASFHQPVSIPPAFQLCILVHCKL*LPGSSD Trigger: ATCACTTGAACCTGGCAGGCAGAGTTTGCAGTGAAC...GAGGATGCACAGTTGGAAAGCAGGAGGAATGCTGACTGGTTGATGAAAACTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR TCA 90 bp | GCTAGTTTTCATCAACCAGTCAGCATTCCTCCTGCTTTCCAACTGTGCATCCTCTTGGCTCATCCTCCATaGTTGTTGATCTTCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASFHQPVSIPPAFQLCILLAHPP*LLIFQC Trigger: ACACTGGAAGATCAACAATCATGGAGGATGAGCCAA...GAGGATGCACAGTTGGAAAGCAGGAGGAATGCTGACTGGTTGATGAAAACTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR TCA 90 bp | ATGGCTTCTTGCAAACACTCTTGTTCCCTTGATCTCATGGAGCGAATGAATGCTCTGCGTGGTCTCTGCTaGAAGAACCTGCACATTCAA | + |
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Preference number: 4 (lower is better) Translates to: MASCKHSCSLDLMERMNALRGLC*KNLHIQ Trigger: TTGAATGTGCAGGTTCTTTCAGCAGAGACCACGCAG...AGCATTCATTCGCTCCATGAGATCAAGGGAACAAGAGTGTTTGCAAGAAGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR CCA 90 bp | TCTTCAAAGGGCTCGGTCCAACTTGCCCGGGGATATTCGTGTATATTGATCTCACTGTGCATCCTCAGCTaGACACAAACATTTTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: SSKGSVQLARGYSCILISLCILS*TQTFSS Trigger: ACTGGAAAATGTTTGTGTCCAGCTGAGGATGCACAG...TGAGATCAATATACACGAATATCCCCGGGCAAGTTGGACCGAGCCCTTTGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR CCA 90 bp | CATCAACCAGTCAGCATTCCTCCTGCTTTCCAACTGTGCATCCTCAGCTGGACATCAGCATCTACAATGTaGCCCAATAAAAGAAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: HQPVSIPPAFQLCILSWTSASTM*PNKRKG Trigger: ACCCTTTCTTTTATTGGGCCACATTGTAGATGCTGA...TGTCCAGCTGAGGATGCACAGTTGGAAAGCAGGAGGAATGCTGACTGGTTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR CCA 90 bp | TCTTCAAAGGGCTCGGTCCAACTTGCCCGGGGATATTCGTGTATATTGATCTCACTGAGTTTCCCTTACTaGTTGCAGAAAAGTCACAAA | + |
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Preference number: 4 (lower is better) Translates to: SSKGSVQLARGYSCILISLSFPY*LQKSHK Trigger: TTTGTGACTTTTCTGCAACCAGTAAGGGAAACTCAG...TGAGATCAATATACACGAATATCCCCGGGCAAGTTGGACCGAGCCCTTTGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR CCA 90 bp | ATGGCTTCTTGCAAACACTCTTGTTCCCTTGATCTCATGGAGCGAATGAATGCTTCACCTGTGATGTCTTaGCAAGTCCTGGTGAAGTTA | + |
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Preference number: 4 (lower is better) Translates to: MASCKHSCSLDLMERMNASPVMS*QVLVKL Trigger: TAACTTCACCAGGACTTGCCAAGACATCACAGGTGA...AGCATTCATTCGCTCCATGAGATCAAGGGAACAAGAGTGTTTGCAAGAAGCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR CCA 90 bp | CATCAACCAGTCAGCATTCCTCCTGCTTTCCAACTGTGCATCCTCAGCTGGACATCAAAATTAAAAACTTaGCTCCACTCTGTGCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: HQPVSIPPAFQLCILSWTSKLKT*LHSVLY Trigger: ATACAGCACAGAGTGGAGCCAAGTTTTTAATTTTGA...TGTCCAGCTGAGGATGCACAGTTGGAAAGCAGGAGGAATGCTGACTGGTTGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR GCA 90 bp | ATGGCTTCTTGCAAACACTCTTGTTCCCTTGATCTCATGGAGCGAATGAATGCTTCTGCTGAAAGAACCTaGACATTCAATGCTCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: MASCKHSCSLDLMERMNASAERT*TFNALS Trigger: ACTGAGAGCATTGAATGTGCAGGTTCTTTCAGCAGA...AGCATTCATTCGCTCCATGAGATCAAGGGAACAAGAGTGTTTGCAAGAAGCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR GCA 90 bp | ATGGCTTCTTGCAAACACTCTTGTTCCCTTGATCTCATGGAGCGAATGAATGCTGAGTGGGAATTCTCTTaGTGTTTCCATGGGTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: MASCKHSCSLDLMERMNAEWEFS*CFHGFH Trigger: ATGAAACCCATGGAAACAGCAAGAGAATTCCCACTC...AGCATTCATTCGCTCCATGAGATCAAGGGAACAAGAGTGTTTGCAAGAAGCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR GCA 90 bp | CCTCAGCTGGACACAAACATTTTCCAGTCTACTCATTCACAAAATAAACTTCTGGTGATCTTGGTTCACTaGAAACTCTGCCTGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: PQLDTNIFQSTHSQNKLLVILVH*KLCLPG Trigger: ACCTGGCAGGCAGAGTTTGCAGTGAACCAAGATCAC...CAGAAGTTTATTTTGTGAATGAGTAGACTGGAAAATGTTTGTGTCCAGCTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR CCA 90 bp | ATGGCTTCTTGCAAACACTCTTGTTCCCTTGATCTCATGGAGCGAATGAATGCTTTTTGCACTCTTCTCTaGCCTTCAAGTATTTTGCGG | + |
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Preference number: 4 (lower is better) Translates to: MASCKHSCSLDLMERMNAFCTLL*PSSILR Trigger: CCGCAAAATACTTGAAGGCCAGAGAAGAGTGCAAAA...AGCATTCATTCGCTCCATGAGATCAAGGGAACAAGAGTGTTTGCAAGAAGCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR GCA 90 bp | ATGGCTTCTTGCAAACACTCTTGTTCCCTTGATCTCATGGAGCGAATGAATGCTCTCATAATGGCTTCTTaGAAACACTCTTGTTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: MASCKHSCSLDLMERMNALIMAS*KHSCSL Trigger: AAGGGAACAAGAGTGTTTGCAAGAAGCCATTATGAG...AGCATTCATTCGCTCCATGAGATCAAGGGAACAAGAGTGTTTGCAAGAAGCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR CCA 90 bp | ATGGCTTCTTGCAAACACTCTTGTTCCCTTGATCTCATGGAGCGAATGAATGCTCTTGCAGTACATTCATaGTATGTTGCTTCCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: MASCKHSCSLDLMERMNALAVHS*YVASCF Trigger: AAAGCAGGAAGCAACATACCATGAATGTACTGCAAG...AGCATTCATTCGCTCCATGAGATCAAGGGAACAAGAGTGTTTGCAAGAAGCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR TCA 90 bp | ATGGCTTCTTGCAAACACTCTTGTTCCCTTGATCTCATGGAGCGAATGAATGCTCACAAAATAAACTTCTaGGTATTCTTCAAAGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: MASCKHSCSLDLMERMNAHKINF*VFFKGL Trigger: GAGCCCTTTGAAGAATACTCAGAAGTTTATTTTGTG...AGCATTCATTCGCTCCATGAGATCAAGGGAACAAGAGTGTTTGCAAGAAGCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR TCA 90 bp | CCTCAGCTGGACACAAACATTTTCCAGTCTACTCATTCACAAAATAAACTTCTGACACTCTTGTTCCCTTaGTCTCATGGAGCGAATGAA | + |
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Preference number: 4 (lower is better) Translates to: PQLDTNIFQSTHSQNKLLTLLFP*SHGANE Trigger: TTCATTCGCTCCATGAGATCAAGGGAACAAGAGTGT...CAGAAGTTTATTTTGTGAATGAGTAGACTGGAAAATGTTTGTGTCCAGCTGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR TCA 90 bp | CCTCAGCTGGACACAAACATTTTCCAGTCTACTCATTCACAAAATAAACTTCTGTCATGTCTCTTCACATaGCACAAATGTGTTCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: PQLDTNIFQSTHSQNKLLSCLFT*HKCVPL Trigger: CAAGGGAACACATTTGTGTCATGTGAAGAGACATGA...CAGAAGTTTATTTTGTGAATGAGTAGACTGGAAAATGTTTGTGTCCAGCTGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR GCA 90 bp | CCTCAGCTGGACACAAACATTTTCCAGTCTACTCATTCACAAAATAAACTTCTGAACCTGCACATTCAATaGTCTCAGTTTCTCCGAATC | + |
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Preference number: 4 (lower is better) Translates to: PQLDTNIFQSTHSQNKLLNLHIQ*SQFLRI Trigger: GATTCGGAGAAACTGAGAGCATTGAATGTGCAGGTT...CAGAAGTTTATTTTGTGAATGAGTAGACTGGAAAATGTTTGTGTCCAGCTGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR TCA 90 bp | CCTCAGCTGGACACAAACATTTTCCAGTCTACTCATTCACAAAATAAACTTCTGCATTCGGGTATTCCATaGTTCTACAAGTGTAGTTTA | + |
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Preference number: 4 (lower is better) Translates to: PQLDTNIFQSTHSQNKLLHSGIP*FYKCSL Trigger: TAAACTACACTTGTAGAATCATGGAATACCCGAATG...CAGAAGTTTATTTTGTGAATGAGTAGACTGGAAAATGTTTGTGTCCAGCTGAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR GCA 90 bp | CCTCAGCTGGACACAAACATTTTCCAGTCTACTCATTCACAAAATAAACTTCTGTGGTATGTTGCTTCCTaGTTTAAGTTTATCTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: PQLDTNIFQSTHSQNKLLWYVAS*FKFISA Trigger: TGCAGAGATAAACTTAAAGCAGGAAGCAACATACCA...CAGAAGTTTATTTTGTGAATGAGTAGACTGGAAAATGTTTGTGTCCAGCTGAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR GCA 90 bp | CCTCAGCTGGACACAAACATTTTCCAGTCTACTCATTCACAAAATAAACTTCTGACAAATGTGTTCCCTTaGAGTACATTCATGGTATGT | + |
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Preference number: 4 (lower is better) Translates to: PQLDTNIFQSTHSQNKLLTNVFP*STFMVC Trigger: ACATACCATGAATGTACTGCAAGGGAACACATTTGT...CAGAAGTTTATTTTGTGAATGAGTAGACTGGAAAATGTTTGTGTCCAGCTGAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR CAA 90 bp | CATCAACCAGTCAGCATTCCTCCTGCTTTCCAACTGTGCATCCTCAGCTGGACAAGGGCTCGGTCCAACTaGCCCGGGGATATTCGTGTA | + |
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Preference number: 5 (lower is better) Translates to: HQPVSIPPAFQLCILSWTRARSN*PGDIRV Trigger: TACACGAATATCCCCGGGCAAGTTGGACCGAGCCCT...TGTCCAGCTGAGGATGCACAGTTGGAAAGCAGGAGGAATGCTGACTGGTTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR CAA 90 bp | GGATGGTCTCGATCCCTTGACCTCATGATCCTCCCACCTCAGAATCCCAAAGTGTTCACCTGTGATGTCTaGGCAAGTCCTGGTGAAGTT | + |
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Preference number: 5 (lower is better) Translates to: GWSRSLDLMILPPQNPKVFTCDV*ASPGEV Trigger: AACTTCACCAGGACTTGCCAAGACATCACAGGTGAA...CACTTTGGGATTCTGAGGTGGGAGGATCATGAGGTCAAGGGATCGAGACCATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS TCA 90 bp | GAAGTAACTTATAGTTCTGGAATTGGGGGAAGCACTTCCTGGACTTaGTCCAAAGGCAGCCTCTGCGTGGTCTCTGCTGAAAGAACCTGC | + |
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Preference number: 5 (lower is better) Translates to: EVTYSSGIGGSTSWT*SKGSLCVVSAERTC Trigger: GCAGGTTCTTTCAGCAGAGACCACGCAGAGGCTGCCTTTGGATCAAGTCCAGGAAGTGCTTCCCCCAATTCCAGAACTATAAGTTACTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR CAA 90 bp | GCTAGTTTTCATCAACCAGTCAGCATTCCTCCTGCTTTCCAACTGTGCATCCTCATGACTCTGCCACTTTaGCACTCTTCTCTGGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: ASFHQPVSIPPAFQLCILMTLPL*HSSLAF Trigger: GAAGGCCAGAGAAGAGTGCAAAAGTGGCAGAGTCAT...GAGGATGCACAGTTGGAAAGCAGGAGGAATGCTGACTGGTTGATGAAAACTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR CAA 90 bp | CATCAACCAGTCAGCATTCCTCCTGCTTTCCAACTGTGCATCCTCAGCTGGACAAGTTTCCCTTACTGGTaGCAGAAAAGTCACAAAAGA | + |
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Preference number: 5 (lower is better) Translates to: HQPVSIPPAFQLCILSWTSFPYW*QKSHKR Trigger: TCTTTTGTGACTTTTCTGCAACCAGTAAGGGAAACT...TGTCCAGCTGAGGATGCACAGTTGGAAAGCAGGAGGAATGCTGACTGGTTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR CAA 90 bp | GCTAGTTTTCATCAACCAGTCAGCATTCCTCCTGCTTTCCAACTGTGCATCCTCCTCAAAATTAAAAACTaGGCTCCACTCTGTGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: ASFHQPVSIPPAFQLCILLKIKN*APLCAV Trigger: TACAGCACAGAGTGGAGCCAAGTTTTTAATTTTGAG...GAGGATGCACAGTTGGAAAGCAGGAGGAATGCTGACTGGTTGATGAAAACTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR CAA 90 bp | CCTCAGCTGGACACAAACATTTTCCAGTCTACTCATTCACAAAATAAACTTCTGCTTATAGTTCTGGAATaGGGGGAAGCACTTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: PQLDTNIFQSTHSQNKLLLIVLE*GEALPG Trigger: TCCAGGAAGTGCTTCCCCCAATTCCAGAACTATAAG...CAGAAGTTTATTTTGTGAATGAGTAGACTGGAAAATGTTTGTGTCCAGCTGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS TCA 90 bp | TCCTGTATTTTATTTAGTTGTTTGCCAGTCAGTTGTCCTCCCGACTaGAAACTCCTTGATCAAAGAGTTGTCTTTCCTTTTTGTAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: SCILFSCLPVSCPPD*KLLDQRVVFPFCSP Trigger: GGGGCTACAAAAAGGAAAGACAACTCTTTGATCAAGGAGTTTTCAGTCGGGAGGACAACTGACTGGCAAACAACTAAATAAAATACAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000495029.1 |
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| CDS CCA 90 bp | CAAACCAAACACGAGGAGCACATTTTAAATTCACCTGTGATGTCTTaGCAAGTCCTGGTGAAGTTACGAAAATTGGAGGGATTTAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: QTKHEEHILNSPVMS*QVLVKLRKLEGFRK Trigger: CTTTCTAAATCCCTCCAATTTTCGTAACTTCACCAGGACTTGCCAAGACATCACAGGTGAATTTAAAATGTGCTCCTCGTGTTTGGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372489.2 ENST00000381938.4 |
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| CDS CCA 90 bp | TCTTTGCAAATGGAAATACAAGGAACGTCCTCCCAAAGACTGACGTaGAAGCAATACTTATGTTTCCATTGCATCTTGTTTACATCCCTG | + |
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Preference number: 5 (lower is better) Translates to: SLQMEIQGTSSQRLT*KQYLCFHCILFTSL Trigger: CAGGGATGTAAACAAGATGCAATGGAAACATAAGTATTGCTTCCACGTCAGTCTTTGGGAGGACGTTCCTTGTATTTCCATTTGCAAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000495029.1 |
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| CDS-3UTR CAA 90 bp | CCTCAGCTGGACACAAACATTTTCCAGTCTACTCATTCACAAAATAAACTTCTGTTTATCGATTTCTCCTaGCTTGGCTCATCCTCCATG | + |
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Preference number: 5 (lower is better) Translates to: PQLDTNIFQSTHSQNKLLFIDFS*LGSSSM Trigger: CATGGAGGATGAGCCAAGCAAGGAGAAATCGATAAA...CAGAAGTTTATTTTGTGAATGAGTAGACTGGAAAATGTTTGTGTCCAGCTGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR CAA 90 bp | CCTCAGCTGGACACAAACATTTTCCAGTCTACTCATTCACAAAATAAACTTCTGTGGCCTTCAAGTATTTaGCGGATAGTGAGGATGATC | + |
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Preference number: 5 (lower is better) Translates to: PQLDTNIFQSTHSQNKLLWPSSI*RIVRMI Trigger: GATCATCCTCACTATCCGCAAAATACTTGAAGGCCA...CAGAAGTTTATTTTGTGAATGAGTAGACTGGAAAATGTTTGTGTCCAGCTGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS-3UTR CAA 90 bp | CCTCAGCTGGACACAAACATTTTCCAGTCTACTCATTCACAAAATAAACTTCTGCACAAATGTGTTCCCTaGCAGTACATTCATGGTATG | + |
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Preference number: 5 (lower is better) Translates to: PQLDTNIFQSTHSQNKLLHKCVP*QYIHGM Trigger: CATACCATGAATGTACTGCAAGGGAACACATTTGTG...CAGAAGTTTATTTTGTGAATGAGTAGACTGGAAAATGTTTGTGTCCAGCTGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS TCA 90 bp | TCTCTAGGTGCAAAGAAATGTGTATACAATCATTCGGGTATTCCATaGTTCTACAAGTGTAGTTTATCGATTTCTCCTTGCTTGGCTCAT | + |
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Preference number: 5 (lower is better) Translates to: SLGAKKCVYNHSGIP*FYKCSLSISPCLAH Trigger: ATGAGCCAAGCAAGGAGAAATCGATAAACTACACTTGTAGAATCATGGAATACCCGAATGATTGTATACACATTTCTTTGCACCTAGAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344606.6 ENST00000381938.4 |
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| CDS GCA 90 bp | ACGTCCTCCCAAAGACTGACGTGGAAGCAATACTTATGTTTCCATTaGATCTTGTTTACATCCCTGTTTCAGTTAATTCCTGTATTTTAT | + |
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Preference number: 5 (lower is better) Translates to: TSSQRLTWKQYLCFH*ILFTSLFQLIPVFY Trigger: ATAAAATACAGGAATTAACTGAAACAGGGATGTAAACAAGATGCAATGGAAACATAAGTATTGCTTCCACGTCAGTCTTTGGGAGGACGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000495029.1 |
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| CDS-3UTR CAA 90 bp | CCTCAGCTGGACACAAACATTTTCCAGTCTACTCATTCACAAAATAAACTTCTGCTTTCTTTCGGTGTCTaGAAATATTCCGGCAAAATT | + |
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Preference number: 5 (lower is better) Translates to: PQLDTNIFQSTHSQNKLLLSFGV*KYSGKI Trigger: AATTTTGCCGGAATATTTCAAGACACCGAAAGAAAG...CAGAAGTTTATTTTGTGAATGAGTAGACTGGAAAATGTTTGTGTCCAGCTGAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS TCA 72 bp | TATAGTTCTGGAATTGGGGGAAGCACTTCCTGGACTTaGTCCAAAGGCAGCCTCTGCGTGGTCTCTGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: YSSGIGGSTSWT*SKGSLCVVSAE Trigger: TTCAGCAGAGACCACGCAGAGGCTGCCTTTGGATCAAGTCCAGGAAGTGCTTCCCCCAATTCCAGAACTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381938.4 |
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| CDS TCA 72 bp | TGCAAATGGAAATACAAGGAACGTCCTCCCAAAGACTaGCGTGGAAGCAATACTTATGTTTCCATTGCATCT | + |
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Preference number: 6 (lower is better) Translates to: CKWKYKERPPKD*RGSNTYVSIAS Trigger: AGATGCAATGGAAACATAAGTATTGCTTCCACGTCAGTCTTTGGGAGGACGTTCCTTGTATTTCCATTTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000495029.1 |
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| CDS CCA 72 bp | ATGGAAATACAAGGAACGTCCTCCCAAAGACTGACGTaGAAGCAATACTTATGTTTCCATTGCATCTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: MEIQGTSSQRLT*KQYLCFHCILF Trigger: AAACAAGATGCAATGGAAACATAAGTATTGCTTCCACGTCAGTCTTTGGGAGGACGTTCCTTGTATTTCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000495029.1 |
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| CDS TCA 72 bp | TTATTTAGTTGTTTGCCAGTCAGTTGTCCTCCCGACTaGAAACTCCTTGATCAAAGAGTTGTCTTTCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: LFSCLPVSCPPD*KLLDQRVVFPF Trigger: AAAAGGAAAGACAACTCTTTGATCAAGGAGTTTTCAGTCGGGAGGACAACTGACTGGCAAACAACTAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000495029.1 |
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| CDS CAA 72 bp | CCAAAGACTGACGTGGAAGCAATACTTATGTTTCCATaGCATCTTGTTTACATCCCTGTTTCAGTTAATTCC | + |
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Preference number: 6 (lower is better) Translates to: PKTDVEAILMFP*HLVYIPVSVNS Trigger: GGAATTAACTGAAACAGGGATGTAAACAAGATGCAATGGAAACATAAGTATTGCTTCCACGTCAGTCTTTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000495029.1 |
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| CDS GCA 72 bp | CAAAGACTGACGTGGAAGCAATACTTATGTTTCCATTaGATCTTGTTTACATCCCTGTTTCAGTTAATTCCT | + |
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Preference number: 6 (lower is better) Translates to: QRLTWKQYLCFH*ILFTSLFQLIP Trigger: AGGAATTAACTGAAACAGGGATGTAAACAAGATGCAATGGAAACATAAGTATTGCTTCCACGTCAGTCTTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000495029.1 |
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| CDS TCA 72 bp | GCAAAGAAATGTGTATACAATCATTCGGGTATTCCATaGTTCTACAAGTGTAGTTTATCGATTTCTCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: AKKCVYNHSGIP*FYKCSLSISPC Trigger: GCAAGGAGAAATCGATAAACTACACTTGTAGAATCATGGAATACCCGAATGATTGTATACACATTTCTTTGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344606.6 ENST00000381938.4 |
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