RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM154 (Homo sapiens)

Ensembl gene IDs: ENSG00000170006

Ensembl transcript IDs: ENST00000304385.8, ENST00000504064.1, ENST00000510252.1

Found 435 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGAGCCACCTACATCAAGGTGGATCCAGGCTGTGGTCTTGCATTaGGTAACAAAGCCCTTCCCAGAGGGAGGAGTCACACCATTGGGT +
Preference number: 1 (lower is better)
Translates to: QEPPTSRWIQAVVLH*VTKPFPEGGVTPLG
Trigger: ACCCAATGGTGTGACTCCTCCCTCTGGGAAGGGCTTTGTTACCCAATGCAAGACCACAGCCTGGATCCACCTTGATGTAGGTGGCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 90 bp CATGCTAGGGTCTACAAGTTACCAAACGCCACCTCATCAGGACTGTaGACCCCTCTCACTGTGTCTTCTTGGCAGGCAGAGCTTACTGAC +
Preference number: 1 (lower is better)
Translates to: HARVYKLPNATSSGL*TPLTVSSWQAELTD
Trigger: GTCAGTAAGCTCTGCCTGCCAAGAAGACACAGTGAGAGGGGTCCACAGTCCTGATGAGGTGGCGTTTGGTAACTTGTAGACCCTAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 90 bp AAGTGGGACCCCCAGATCCAGTTGAACTGCCCAGCCAATGCCGTGTaGGAGAGAGTTGAACCATTTGCACTGAGCCTCATGCAAATTGCA +
Preference number: 1 (lower is better)
Translates to: KWDPQIQLNCPANAV*ERVEPFALSLMQIA
Trigger: TGCAATTTGCATGAGGCTCAGTGCAAATGGTTCAACTCTCTCCCACACGGCATTGGCTGGGCAGTTCAACTGGATCTGGGGGTCCCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 90 bp GAGGCTTATCCCAGCTTGGCGGGAGAGAATGCTAAGCATGATGAGTaGGATCTGCCACAGGCACGGATATTTCCTGCTCCTCTTCTGTTT +
Preference number: 1 (lower is better)
Translates to: EAYPSLAGENAKHDE*DLPQARIFPAPLLF
Trigger: AAACAGAAGAGGAGCAGGAAATATCCGTGCCTGTGGCAGATCTCACTCATCATGCTTAGCATTCTCTCCCGCCAAGCTGGGATAAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 90 bp TCCAGGGGTGGGCCACTTGAGCTCAGGCTGAATCCCAAGCAATGCTaGTTTTGCTGTTCTCCACACTCCTATATACATTCTAGGCTGGAG +
Preference number: 1 (lower is better)
Translates to: SRGGPLELRLNPKQC*FCCSPHSYIHSRLE
Trigger: CTCCAGCCTAGAATGTATATAGGAGTGTGGAGAACAGCAAAATCAGCATTGCTTGGGATTCAGCCTGAGCTCAAGTGGCCCACCCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR GCA 90 bp CCTAGGGTCCTGCCTTCACTGCCTCTGTTCCTTCTTATCTCAGCCTaGAGCCTCTGTTACTTCTTATCTCAGGCTATGCTCACCTTAAGG +
Preference number: 1 (lower is better)
Translates to: PRVLPSLPLFLLISA*SLCYFLSQAMLTLR
Trigger: CCTTAAGGTGAGCATAGCCTGAGATAAGAAGTAACAGAGGCTGCAGGCTGAGATAAGAAGGAACAGAGGCAGTGAAGGCAGGACCCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR GCA 90 bp CTACTTTGCTCTCTTGGGACACTTGCTCTTGGAACTCAGCTGCCATaGTGTGAAGAAGCCCAAGGAGTCTATGGAGAGGCCCACATCATA +
Preference number: 1 (lower is better)
Translates to: LLCSLGTLALGTQLP*CEEAQGVYGEAHII
Trigger: TATGATGTGGGCCTCTCCATAGACTCCTTGGGCTTCTTCACAGCATGGCAGCTGAGTTCCAAGAGCAAGTGTCCCAAGAGAGCAAAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 90 bp CCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTaGGACTGCATGCTCTTTGGGTCCATGCTGTCTCCAGTCTGGCTA +
Preference number: 1 (lower is better)
Translates to: PHDECWSRCILSLTL*DCMLFGSMLSPVWL
Trigger: TAGCCAGACTGGAGACAGCATGGACCCAAAGAGCATGCAGTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 90 bp ACCATAGAGATGACTGTTCCCTGCTGCCTTGCAGAGATTGGCCAATaGGATGTAAGCAGAGTTGCTTCACTGGGCTGGCAGGAAAGCTAT +
Preference number: 1 (lower is better)
Translates to: TIEMTVPCCLAEIGQ*DVSRVASLGWQESY
Trigger: ATAGCTTTCCTGCCAGCCCAGTGAAGCAACTCTGCTTACATCTCATTGGCCAATCTCTGCAAGGCAGCAGGGAACAGTCATCTCTATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR GCA 90 bp ATATCCATTTCCATTGCTAGAGCTGCGGTGATCAGCAGAAGCATCTaGCTGGCTGTCAATATCAAGGTGGATCCAGGCTGTTGGAACTGG +
Preference number: 1 (lower is better)
Translates to: ISISIARAAVISRSI*LAVNIKVDPGCWNW
Trigger: CCAGTTCCAACAGCCTGGATCCACCTTGATATTGACAGCCAGGCAGATGCTTCTGCTGATCACCGCAGCTCTAGCAATGGAAATGGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR GCA 90 bp GATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACTaGATGCTCTTTGGGTCCATGCTGTCTCCAGTCTGGCTAAGTTCT +
Preference number: 1 (lower is better)
Translates to: DECWSRCILSLTLWD*MLFGSMLSPVWLSS
Trigger: AGAACTTAGCCAGACTGGAGACAGCATGGACCCAAAGAGCATGCAGTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 90 bp TGCCTGGCTGTCAATATCAAGGTGGATCCAGGCTGTTGGAACTGGTaGATCCAGGGGTTGGAACGGAGGAATACTAAAAATGAGACTTGG +
Preference number: 1 (lower is better)
Translates to: CLAVNIKVDPGCWNW*IQGLERRNTKNETW
Trigger: CCAAGTCTCATTTTTAGTATTCCTCCGTTCCAACCCCTGGATCCACCAGTTCCAACAGCCTGGATCCACCTTGATATTGACAGCCAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 90 bp CTTGGGAGGCTCACCCTTGTGCTGGTTCCCTCTCTTTCCTTCTTGTaGATATCATGCTGGAGTTACAACCACCATTTTGGATCATGTGGC +
Preference number: 1 (lower is better)
Translates to: LGRLTLVLVPSLSFL*ISCWSYNHHFGSCG
Trigger: GCCACATGATCCAAAATGGTGGTTGTAACTCCAGCATGATATTCACAAGAAGGAAAGAGAGGGAACCAGCACAAGGGTGAGCCTCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR GCA 90 bp GGCAGCGATGGATGGCAGCCAGGCCTTTTCCTAGTACTTCTCAATTaGACATTCTTCCAAGTGCAAGTGATGCCATCATTAGGAAGAGTG +
Preference number: 1 (lower is better)
Translates to: GSDGWQPGLFLVLLN*TFFQVQVMPSLGRV
Trigger: CACTCTTCCTAATGATGGCATCACTTGCACTTGGAAGAATGTGCAATTGAGAAGTACTAGGAAAAGGCCTGGCTGCCATCCATCGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR GCA 90 bp ATCCCAGCTTGGCGGGAGAGAATGCTAAGCATGATGAGTGAGATCTaGCACAGGCACGGATATTTCCTGCTCCTCTTCTGTTTGTTTCAA +
Preference number: 1 (lower is better)
Translates to: IPAWRERMLSMMSEI*HRHGYFLLLFCLFQ
Trigger: TTGAAACAAACAGAAGAGGAGCAGGAAATATCCGTGCCTGTGGCAGATCTCACTCATCATGCTTAGCATTCTCTCCCGCCAAGCTGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 90 bp ATATCAAGGTGGATCCAGGCTGTTGGAACTGGTGGATCCAGGGGTTaGAACGGAGGAATACTAAAAATGAGACTTGGAACTTGGAAGGCC +
Preference number: 1 (lower is better)
Translates to: ISRWIQAVGTGGSRG*NGGILKMRLGTWKA
Trigger: GGCCTTCCAAGTTCCAAGTCTCATTTTTAGTATTCCTCCGTTCCAACCCCTGGATCCACCAGTTCCAACAGCCTGGATCCACCTTGATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 90 bp ATCTGCCTGGCTGTCAATATCAAGGTGGATCCAGGCTGTTGGAACTaGTGGATCCAGGGGTTGGAACGGAGGAATACTAAAAATGAGACT +
Preference number: 1 (lower is better)
Translates to: ICLAVNIKVDPGCWN*WIQGLERRNTKNET
Trigger: AGTCTCATTTTTAGTATTCCTCCGTTCCAACCCCTGGATCCACCAGTTCCAACAGCCTGGATCCACCTTGATATTGACAGCCAGGCAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 90 bp AGAAGCATCTGCCTGGCTGTCAATATCAAGGTGGATCCAGGCTGTTaGAACTGGTGGATCCAGGGGTTGGAACGGAGGAATACTAAAAAT +
Preference number: 1 (lower is better)
Translates to: RSICLAVNIKVDPGC*NWWIQGLERRNTKN
Trigger: ATTTTTAGTATTCCTCCGTTCCAACCCCTGGATCCACCAGTTCCAACAGCCTGGATCCACCTTGATATTGACAGCCAGGCAGATGCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 90 bp AATGCTGATTTTGCTGTTCTCCACACTCCTATATACATTCTAGGCTaGAGTATCCTGCAAGCCAGCACGACTATGGCTGTGAAGAGGCAA +
Preference number: 1 (lower is better)
Translates to: NADFAVLHTPIYILG*SILQASTTMAVKRQ
Trigger: TTGCCTCTTCACAGCCATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGGAGAACAGCAAAATCAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR GCA 90 bp TTGCATGAAGACACACCAATTTGGGCAGATCACATTTTCCAACGGTaGCTGCAACAAATCCCTTATCCCACTTGCTCTTCTCATAATGTG +
Preference number: 1 (lower is better)
Translates to: LHEDTPIWADHIFQR*LQQIPYPTCSSHNV
Trigger: CACATTATGAGAAGAGCAAGTGGGATAAGGGATTTGTTGCAGGCACCGTTGGAAAATGTGATCTGCCCAAATTGGTGTGTCTTCATGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 90 bp TTTCCCAAGACCAGTTTTACTCATCTTTATCACATTTGTTTGATGTaGGTTATCCAGGAGCCACCTACATCAAGGTGGATCCAGGCTGTG +
Preference number: 1 (lower is better)
Translates to: FPKTSFTHLYHICLM*VIQEPPTSRWIQAV
Trigger: CACAGCCTGGATCCACCTTGATGTAGGTGGCTCCTGGATAACCCACATCAAACAAATGTGATAAAGATGAGTAAAACTGGTCTTGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 90 bp ACAAGTATTTTCTTAACATATCCATTTCCATTGCTAGAGCTGCGGTaGTCAGCAGAAGCATCTGCCTGGCTGTCAATATCAAGGTGGATC +
Preference number: 1 (lower is better)
Translates to: TSIFLTYPFPLLELR*SAEASAWLSISRWI
Trigger: GATCCACCTTGATATTGACAGCCAGGCAGATGCTTCTGCTGATCACCGCAGCTCTAGCAATGGAAATGGATATGTTAAGAAAATACTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 90 bp AGGAAACCATCGATAAAACAGCTTCCTGATTTAGGCCCTAAGGAATaGAGCAGAAAGGTGACGAACATTTATCATGACCAGAGTGAGTTC +
Preference number: 1 (lower is better)
Translates to: RKPSIKQLPDLGPKE*SRKVTNIYHDQSEF
Trigger: GAACTCACTCTGGTCATGATAAATGTTCGTCACCTTTCTGCTTCATTCCTTAGGGCCTAAATCAGGAAGCTGTTTTATCGATGGTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 90 bp ATACATTTCTATGTGTCTGATCCACCTACAACCCATTCAGTCCCATaGCTCATGACTCATGTAGTTGGTAAAACTAGTTCTACCACCTAC +
Preference number: 1 (lower is better)
Translates to: IHFYVSDPPTTHSVP*LMTHVVGKTSSTTY
Trigger: GTAGGTGGTAGAACTAGTTTTACCAACTACATGAGTCATGAGCCATGGGACTGAATGGGTTGTAGGTGGATCAGACACATAGAAATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 90 bp ATTATTTTCCCAAGACCAGTTTTACTCATCTTTATCACATTTGTTTaGTGTGGGTTATCCAGGAGCCACCTACATCAAGGTGGATCCAGG +
Preference number: 1 (lower is better)
Translates to: IIFPRPVLLIFITFV*CGLSRSHLHQGGSR
Trigger: CCTGGATCCACCTTGATGTAGGTGGCTCCTGGATAACCCACATCAAACAAATGTGATAAAGATGAGTAAAACTGGTCTTGGGAAAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 90 bp GAGGTGTTTCACCGACATCAGAGTAATACATTGCTTACTCTCCACTaGTTTGTACACTGGAAAAATGTTGTTTGCTGCAGTGTAGTAGCT +
Preference number: 1 (lower is better)
Translates to: EVFHRHQSNTLLTLH*FVHWKNVVCCSVVA
Trigger: AGCTACTACACTGCAGCAAACAACATTTTTCCAGTGTACAAATCAGTGGAGAGTAAGCAATGTATTACTCTGATGTCGGTGAAACACCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 90 bp ATTTTAACCTCATGCTTTGAGAGTAGTCATACATTTCTATGTGTCTaGTCCACCTACAACCCATTCAGTCCCATGGCTCATGACTCATGT +
Preference number: 1 (lower is better)
Translates to: ILTSCFESSHTFLCV*STYNPFSPMAHDSC
Trigger: ACATGAGTCATGAGCCATGGGACTGAATGGGTTGTAGGTGGATCAGACACATAGAAATGTATGACTACTCTCAAAGCATGAGGTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 90 bp TGGGGCCACTTTCTCTCCACCTCCACTTGCTTGTTAGTTCAATTATaGTCGTTCTCTGCTTCCTTCCATATTGGATTTAATGTAGCTAAA +
Preference number: 1 (lower is better)
Translates to: WGHFLSTSTCLLVQL*SFSASFHIGFNVAK
Trigger: TTTAGCTACATTAAATCCAATATGGAAGGAAGCAGAGAACGATCATAATTGAACTAACAAGCAAGTGGAGGTGGAGAGAAAGTGGCCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 90 bp TTTTGTTATGCATTAGGGCAGACTTTCAAGCACAAGACACAAAATTaGGCAGCAAATGTTTGGGTAGTCCCATCTCCCTTCGGTTTATAT +
Preference number: 1 (lower is better)
Translates to: FCYALGQTFKHKTQN*AANVWVVPSPFGLY
Trigger: ATATAAACCGAAGGGAGATGGGACTACCCAAACATTTGCTGCTCAATTTTGTGTCTTGTGCTTGAAAGTCTGCCCTAATGCATAACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 90 bp AATGCAATTAAACCAGGAAACTTGGGAGAAAATGGTGATGGAAGATaGACAATACCATATTTGAGTTCTGCACTCACTGATGATAAAGAC +
Preference number: 1 (lower is better)
Translates to: NAIKPGNLGENGDGR*TIPYLSSALTDDKD
Trigger: GTCTTTATCATCAGTGAGTGCAGAACTCAAATATGGTATTGTTCATCTTCCATCACCATTTTCTCCCAAGTTTCCTGGTTTAATTGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 90 bp AGTAATAAAAAGACACAAGGTACAAGAATTGAGGCTTGGCTGTTCTaGCTGTATACTAACTTCATATACCCTGACAGAATAAACTATCTT +
Preference number: 1 (lower is better)
Translates to: SNKKTQGTRIEAWLF*LYTNFIYPDRINYL
Trigger: AAGATAGTTTATTCTGTCAGGGTATATGAAGTTAGTATACAGCCAGAACAGCCAAGCCTCAATTCTTGTACCTTGTGTCTTTTTATTACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 90 bp CCAGGAGCCACCTACATCAAGGTGGATCCAGGCTGTGGTCTTGCATaGGGTAACAAAGCCCTTCCCAGAGGGAGGAGTCACACCATTGGG +
Preference number: 2 (lower is better)
Translates to: PGATYIKVDPGCGLA*GNKALPRGRSHTIG
Trigger: CCCAATGGTGTGACTCCTCCCTCTGGGAAGGGCTTTGTTACCCAATGCAAGACCACAGCCTGGATCCACCTTGATGTAGGTGGCTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp GATCCTCTCCTCTGTGCATTCGATAGTGGGGTTGTCTGGTGGAGGCTAGGGGAGGCCCGCTGTTTTCCCTaGAGCTCTTTCAGAGAGACC +
Preference number: 2 (lower is better)
Translates to: DPLLCAFDSGVVWWRLGEARCFP*SSFRET
Trigger: GGTCTCTCTGAAAGAGCTGCAGGGAAAACAGCGGGC...CTCCCCTAGCCTCCACCAGACAACCCCACTATCGAATGCACAGAGGAGAGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504064.1
3UTR CAA 90 bp GTTATCCAGGAGCCACCTACATCAAGGTGGATCCAGGCTGTGGTCTaGCATTGGGTAACAAAGCCCTTCCCAGAGGGAGGAGTCACACCA +
Preference number: 2 (lower is better)
Translates to: VIQEPPTSRWIQAVV*HWVTKPFPEGGVTP
Trigger: TGGTGTGACTCCTCCCTCTGGGAAGGGCTTTGTTACCCAATGCAAGACCACAGCCTGGATCCACCTTGATGTAGGTGGCTCCTGGATAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGCAGGGGTGGGCCACTTaGGCTCAGGCTGAATCCCAA +
Preference number: 2 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMQGWAT*AQAESQ
Trigger: TTGGGATTCAGCCTGAGCTCAAGTGGCCCACCCCTG...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTCTCTTCATCCTCTGTTaGCAGCCTCAGCAGACTCCC +
Preference number: 2 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLLFILC*QPQQTP
Trigger: GGGAGTCTGCTGAGGCTGCCAACAGAGGATGAAGAG...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTCCAGGCTGTTGGAACTaGTGGATCCAGGGGTTGGAA +
Preference number: 2 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLPGCWN*WIQGLE
Trigger: TTCCAACCCCTGGATCCACCAGTTCCAACAGCCTGG...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACGTGGATCCAGGCTGTTaGAACTGGTGGATCCAGGGG +
Preference number: 2 (lower is better)
Translates to: DPHDECWSRCILSLTLWDVDPGC*NWWIQG
Trigger: CCCCTGGATCCACCAGTTCCAACAGCCTGGATCCAC...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATGCAGTGGCTCAGTCTTaGCACTCACTGCAAACCCCG +
Preference number: 2 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYAVAQS*HSLQTP
Trigger: CGGGGTTTGCAGTGAGTGCCAAGACTGAGCCACTGC...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGGCAGGCAGAGCTTACTaGCCCCCTGGGATGGTGTAT +
Preference number: 2 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMAGRAY*PPGMVY
Trigger: ATACACCATCCCAGGGGGTCAGTAAGCTCTGCCTGC...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACGCTAAGCATGATGAGTaGGATCTGCCACAGGCACGG +
Preference number: 2 (lower is better)
Translates to: DPHDECWSRCILSLTLWDAKHDE*DLPQAR
Trigger: CCGTGCCTGTGGCAGATCTCACTCATCATGCTTAGC...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGCTGGGAGGTGGAGGCTaGAGTGAGCCAAGATCATGC +
Preference number: 2 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMLGGGG*SEPRSC
Trigger: GCATGATCTTGGCTCACTGCAGCCTCCACCTCCCAG...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACACAATCTTGGCTCACTaGAACTGCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: DPHDECWSRCILSLTLWDTILAH*NCRLLG
Trigger: ACCCAGGAGGCGGCAGTTGCAGTGAGCCAAGATTGT...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTCTCTGTGGGACTGCATaGTCTTTGGGTCCATGCTGT +
Preference number: 2 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLLCGTA*SLGPCC
Trigger: ACAGCATGGACCCAAAGAGCATGCAGTCCCACAGAG...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp TTGGGAAGTAAGCCACTGTGCCTGGCTGGGACCACTTCTAATATGAGGCTTACAACCTCATCAGGACTGTaGACCCCTCTCACTGTGTCT +
Preference number: 2 (lower is better)
Translates to: LGSKPLCLAGTTSNMRLTTSSGL*TPLTVS
Trigger: AGACACAGTGAGAGGGGTCCACAGTCCTGATGAGGT...TGTAAGCCTCATATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp CTCCCACCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGTCCAAAGCTGGTTACTaGCCCAAAAGGAAACCATCG +
Preference number: 2 (lower is better)
Translates to: LPPAHTSYLHVTSKGGMVSKAGY*PKRKPS
Trigger: CGATGGTTTCCTTTTGGGTCAGTAACCAGCTTTGGA...CACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGGTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGGACAGGAGGACTGCTTaGGCCCAGGAGTTTGAAACC +
Preference number: 2 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMDRRTA*AQEFET
Trigger: GGTTTCAAACTCCTGGGCTCAAGCAGTCCTCCTGTC...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATCACGAGGGCCAATTCTaGCATAAGCCCTATTGCCCA +
Preference number: 2 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYHEGQF*HKPYCP
Trigger: TGGGCAATAGGGCTTATGGCAGAATTGGCCCTCGTG...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTTGGCTCACTGCAACTaGCGCCTCCTGGGTTCAAGT +
Preference number: 2 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMLAHCN*RLLGSS
Trigger: ACTTGAACCCAGGAGGCGGCAGTTGCAGTGAGCCAA...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTAGATGTAAGCAGAGTTaGTTCACTGGGCTGGCAGGA +
Preference number: 2 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLRCKQS*FTGLAG
Trigger: TCCTGCCAGCCCAGTGAAGCAACTCTGCTTACATCT...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTTGTTCCCTGCTGCCTTaGAGAGATTGGCCAATGAGA +
Preference number: 2 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLCSLLP*RDWPMR
Trigger: TCTCATTGGCCAATCTCTGCAAGGCAGCAGGGAACA...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTCTGTGGGCCATGAGTTaGAAAGGAACATGCAAGAGA +
Preference number: 2 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLLWAMS*KGTCKR
Trigger: TCTCTTGCATGTTCCTTTTCAACTCATGGCCCACAG...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTAAGTTGAGGCTGCAGTaGGCCATAATCACACCATTG +
Preference number: 2 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLKLRLQ*AIITPL
Trigger: CAATGGTGTGATTATGGCTCACTGCAGCCTCAACTT...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATGGAAGTAAGCCACTGTaGCTGGCTGGGACCACTTCT +
Preference number: 2 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDGSKPL*LAGTTS
Trigger: AGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCC...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATATGACTGTTCCCTGCTaGCTTGCAGAGATTGGCCAA +
Preference number: 2 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYMTVPC*LAEIGQ
Trigger: TTGGCCAATCTCTGCAAGGCAGCAGGGAACAGTCAT...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp TTGGGAAGTAAGCCACTGTGCCTGGCTGGGACCACTTCTAATATGAGGCTTACAATGGAAAGACCTCTCTaGTCTGGAACTCTGCCTTTG +
Preference number: 2 (lower is better)
Translates to: LGSKPLCLAGTTSNMRLTMERPL*SGTLPL
Trigger: CAAAGGCAGAGTTCCAGACCAGAGAGGTCTTTCCAT...TGTAAGCCTCATATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp TTGGGAAGTAAGCCACTGTGCCTGGCTGGGACCACTTCTAATATGAGGCTTACAGAGGAGTCACACCATTaGGTCAAGAGTCATGAATGG +
Preference number: 2 (lower is better)
Translates to: LGSKPLCLAGTTSNMRLTEESHH*VKSHEW
Trigger: CCATTCATGACTCTTGACCCAATGGTGTGACTCCTC...TGTAAGCCTCATATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGGTGAAAGTCAGTGTGTaGCCAGACACAGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMVKVSV*PDTVAH
Trigger: GTGAGCCACTGTGTCTGGCCACACACTGACTTTCAC...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATATGAGACTTGGAACTTaGAAGGCCTACACCACGAGG +
Preference number: 2 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYMRLGT*KAYTTR
Trigger: CCTCGTGGTGTAGGCCTTCCAAGTTCCAAGTCTCAT...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTGGTGGATCCAGGGGTTaGAACGGAGGAATACTAAAA +
Preference number: 2 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLGGSRG*NGGILK
Trigger: TTTTAGTATTCCTCCGTTCCAACCCCTGGATCCACC...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATAGCCTCCCGAATAGCTaGGATTACAGGCGACAGCCA +
Preference number: 2 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDSLPNS*DYRRQP
Trigger: TGGCTGTCGCCTGTAATCCCAGCTATTCGGGAGGCT...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGGGCTCACCCTTGTGCTaGTTCCCTCTCTTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKGSPLC*FPLFPS
Trigger: AGAAGGAAAGAGAGGGAACCAGCACAAGGGTGAGCC...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 90 bp AGGCAGCGATGGATGGCAGCCAGGCCTTTTCCTAGTACTTCTCAATaGCACATTCTTCCAAGTGCAAGTGATGCCATCATTAGGAAGAGT +
Preference number: 2 (lower is better)
Translates to: RQRWMAARPFPSTSQ*HILPSASDAIIRKS
Trigger: ACTCTTCCTAATGATGGCATCACTTGCACTTGGAAGAATGTGCAATTGAGAAGTACTAGGAAAAGGCCTGGCTGCCATCCATCGCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 90 bp AATATCAAGGTGGATCCAGGCTGTTGGAACTGGTGGATCCAGGGGTaGGAACGGAGGAATACTAAAAATGAGACTTGGAACTTGGAAGGC +
Preference number: 2 (lower is better)
Translates to: NIKVDPGCWNWWIQG*ERRNTKNETWNLEG
Trigger: GCCTTCCAAGTTCCAAGTCTCATTTTTAGTATTCCTCCGTTCCAACCCCTGGATCCACCAGTTCCAACAGCCTGGATCCACCTTGATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 90 bp CTGCAACAAATCCCTTATCCCACTTGCTCTTCTCATAATGTGGCTTaGACACGCCTCCAAGGACAAGTGGGGTTTATGTCCTTTCCACCT +
Preference number: 2 (lower is better)
Translates to: LQQIPYPTCSSHNVA*TRLQGQVGFMSFPP
Trigger: AGGTGGAAAGGACATAAACCCCACTTGTCCTTGGAGGCGTGTCAAAGCCACATTATGAGAAGAGCAAGTGGGATAAGGGATTTGTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAAGAGCTAGAAGTTGGCTaGGAGGAGGCAACACATGTT +
Preference number: 2 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQELEVG*EEATHV
Trigger: AACATGTGTTGCCTCCTCTCAGCCAACTTCTAGCTC...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGCCAAGGGAGGTATGGTaGAACAAGTGTGAGCTTTGC +
Preference number: 2 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKPREVW*NKCELC
Trigger: GCAAAGCTCACACTTGTTTCACCATACCTCCCTTGG...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATCTATTTAAAAGTGGCTaGCCTACTTGGGAGGCTCAC +
Preference number: 2 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYLFKSG*PTWEAH
Trigger: GTGAGCCTCCCAAGTAGGTCAGCCACTTTTAAATAG...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGCACTTGAGCTCAGGCTaGATCCCAAGCAATGCTGAT +
Preference number: 2 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKHLSSG*IPSNAD
Trigger: ATCAGCATTGCTTGGGATTCAGCCTGAGCTCAAGTG...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATTCAGCTGCCATGCTGTaGAGAAGCCCAAGGAGTCTA +
Preference number: 2 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDSAAML*RSPRSL
Trigger: TAGACTCCTTGGGCTTCTTCACAGCATGGCAGCTGA...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATCAGATGACTCCCACCTaGACATACTTCCTACCTACA +
Preference number: 2 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYQMTPT*TYFLPT
Trigger: TGTAGGTAGGAAGTATGTGCAGGTGGGAGTCATCTG...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGCTAACTCTGTGGGACTaGATGCTCTTTGGGTCCATG +
Preference number: 2 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMLTLWD*MLFGSM
Trigger: CATGGACCCAAAGAGCATGCAGTCCCACAGAGTTAG...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGGGGTCCTGCCTTCACTaGCTCTGTTCCTTCTTATCT +
Preference number: 2 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKGSCLH*LCSFLS
Trigger: AGATAAGAAGGAACAGAGGCAGTGAAGGCAGGACCC...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGGCAGAAGCATCTGCCTaGCTGTCAATATCAAGGTGG +
Preference number: 2 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMAEASA*LSISRW
Trigger: CCACCTTGATATTGACAGCCAGGCAGATGCTTCTGC...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACGTAGTCCCAGCTACTTaGGAGGCTGAGGTAATAGAA +
Preference number: 2 (lower is better)
Translates to: DPHDECWSRCILSLTLWDVVPAT*EAEVIE
Trigger: TTCTATTACCTCAGCCTCCCAAGTAGCTGGGACTAC...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGGACTTTTGGAGGCTGTaGTGGGAGGATTGCTTGAAC +
Preference number: 2 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKDFWRL*WEDCLN
Trigger: GTTCAAGCAATCCTCCCACCACAGCCTCCAAAAGTC...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATGTGTTTAGCACCTTCTaGCCAGGGTGGCTACCTCTT +
Preference number: 2 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDVFSTF*PGWLPL
Trigger: AAGAGGTAGCCACCCTGGCCAGAAGGTGCTAAACAC...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGGCCTCCAAGGACAAGTaGGGTTTATGTCCTTTCCAC +
Preference number: 2 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMASKDK*GLCPFH
Trigger: GTGGAAAGGACATAAACCCCACTTGTCCTTGGAGGC...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATTCATCTCTGATGGACTaGCAGAGACCTCCTGTTGTG +
Preference number: 2 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDSSLMD*QRPPVV
Trigger: CACAACAGGAGGTCTCTGTCAGTCCATCAGAGATGA...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATTTTGGCATAAATATCTaGGAGTCACTGTGGGCCATG +
Preference number: 2 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYFGINI*ESLWAM
Trigger: CATGGCCCACAGTGACTCTCAGATATTTATGCCAAA...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp CTTACAAAGCTCCATCTCAAACCCCTATTCCATTTTCCCTCCAACAATCCTTCCTTCCACGCTGAGCAGTaGGCAAGAGAAAGAGTCTCT +
Preference number: 2 (lower is better)
Translates to: LTKLHLKPLFHFPSNNPSFHAEQ*ARERVS
Trigger: AGAGACTCTTTCTCTTGCTCACTGCTCAGCGTGGAA...GGAAGGATTGTTGGAGGGAAAATGGAATAGGGGTTTGAGATGGAGCTTTGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504064.1
3UTR-3UTR GCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACAGGCGACAGCCACCATaGCTGGCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: DPHDECWSRCILSLTLWDRRQPP*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATGGTGGCTGTCGCCT...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp TTGGGAAGTAAGCCACTGTGCCTGGCTGGGACCACTTCTAATATGAGGCTTACAGAGGCTTGGCTGTTCTaGCTGTATACTAACTTCATA +
Preference number: 2 (lower is better)
Translates to: LGSKPLCLAGTTSNMRLTEAWLF*LYTNFI
Trigger: TATGAAGTTAGTATACAGCCAGAACAGCCAAGCCTC...TGTAAGCCTCATATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACTTGGTGTCTTTTCCATaGCATAACACTCCTCGAGAA +
Preference number: 2 (lower is better)
Translates to: DPHDECWSRCILSLTLWDLVSFP*HNTPRE
Trigger: TTCTCGAGGAGTGTTATGTCATGGAAAAGACACCAA...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGGCTTTGCAGAAATGCTaGCAAGCAAGGGAATTTCAG +
Preference number: 2 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKALQKC*QAREFQ
Trigger: CTGAAATTCCCTTGCTTGTCAGCATTTCTGCAAAGC...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGAGGCCAATGATAAGGTaGTATGAACTGAGGAGTACC +
Preference number: 2 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMRPMIR*YELRST
Trigger: GGTACTCCTCAGTTCATATCACCTTATCATTGGCCT...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATTCTTCCACCACTTTGTaGGACAGAATCCCTTATTGT +
Preference number: 2 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYSSTTL*DRIPYC
Trigger: ACAATAAGGGATTCTGTCTCACAAAGTGGTGGAAGA...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGGGGATTACAGGTACATaGCACTATGCCTGGCTAATT +
Preference number: 2 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKGITGT*HYAWLI
Trigger: AATTAGCCAGGCATAGTGGCATGTACCTGTAATCCC...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACACAAGAATTGAGGCTTaGCTGTTCTGGCTGTATACT +
Preference number: 2 (lower is better)
Translates to: DPHDECWSRCILSLTLWDTRIEA*LFWLYT
Trigger: AGTATACAGCCAGAACAGCCAAGCCTCAATTCTTGT...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 90 bp AAAAATACTATGCATTTCTACTTTGCTCTCTTGGGACACTTGCTCTaGGAACTCAGCTGCCATGCTGTGAAGAAGCCCAAGGAGTCTATG +
Preference number: 2 (lower is better)
Translates to: KNTMHFYFALLGHLL*ELSCHAVKKPKESM
Trigger: CATAGACTCCTTGGGCTTCTTCACAGCATGGCAGCTGAGTTCCAAGAGCAAGTGTCCCAAGAGAGCAAAGTAGAAATGCATAGTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACAATGAAGCAGAAAGGTaGCGAACATTTATCATGACC +
Preference number: 2 (lower is better)
Translates to: DPHDECWSRCILSLTLWDNEAER*RTFIMT
Trigger: GGTCATGATAAATGTTCGTCACCTTTCTGCTTCATT...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATAGTCAGATTTTGTTCTaGTTGCCCTATCCAATTAGG +
Preference number: 2 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYSQILF*LPYPIR
Trigger: CCTAATTGGATAGGGCAATCAGAACAAAATCTGACT...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATTTTATCACATTTGTTTaGTGTGGGTTATCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYFITFV*CGLSRS
Trigger: GCTCCTGGATAACCCACATCAAACAAATGTGATAAA...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTTTGCTTACTCTCCACTaGTTTGTACACTGGAAAAAT +
Preference number: 2 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLLLTLH*FVHWKN
Trigger: ATTTTTCCAGTGTACAAATCAGTGGAGAGTAAGCAA...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACGGACCACTTCTAATATaGGGCTTACAAGGTAGAATT +
Preference number: 2 (lower is better)
Translates to: DPHDECWSRCILSLTLWDGPLLI*GLQGRI
Trigger: AATTCTACCTTGTAAGCCTCATATTAGAAGTGGTCC...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATTGGAGTACAATGGTGTaGTCTCATCTCACTGTAACC +
Preference number: 2 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDWSTMV*SHLTVT
Trigger: GGTTACAGTGAGATGAGATCACACCATTGTACTCCA...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp TTGGGAAGTAAGCCACTGTGCCTGGCTGGGACCACTTCTAATATGAGGCTTACAAGATTTTGTTCTGATTaGCCTATCCAATTAGGGCAA +
Preference number: 2 (lower is better)
Translates to: LGSKPLCLAGTTSNMRLTRFCSD*PIQLGQ
Trigger: TTGCCCTAATTGGATAGGGCAATCAGAACAAAATCT...TGTAAGCCTCATATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATATCAGCAGAAGCATCTaGCTGGCTGTCAATATCAAG +
Preference number: 2 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDISRSI*LAVNIK
Trigger: CTTGATATTGACAGCCAGGCAGATGCTTCTGCTGAT...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTTGGAAAAATGTTGTTTaGTGCAGTGTAGTAGCTACA +
Preference number: 2 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLWKNVV*CSVVAT
Trigger: TGTAGCTACTACACTGCAGCAAACAACATTTTTCCA...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGGATCCACATGATGAATaGTGGTCAAGATGCATCCTT +
Preference number: 2 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMDPHDE*WSRCIL
Trigger: AAGGATGCATCTTGACCAGCATTCATCATGTGGATC...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGGGCAACATGCCAGTCTaGTTGAATGTCTTTCCAATT +
Preference number: 2 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKGNMPV*LNVFPI
Trigger: AATTGGAAAGACATTCAAGCAGACTGGCATGTTGCC...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGAAGACCTCTCTGGTCTaGAACTCTGCCTTTGAAATT +
Preference number: 2 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMKTSLV*NSAFEI
Trigger: AATTTCAAAGGCAGAGTTCCAGACCAGAGAGGTCTT...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATCCACATGATGAATGCTaGTCAAGATGCATCCTTTCC +
Preference number: 2 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDPHDEC*SRCILS
Trigger: GGAAAGGATGCATCTTGACCAGCATTCATCATGTGG...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAAACCTGTCCCACGACTTaGATAATCAGAGGAAATTAT +
Preference number: 2 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQTCPTT*IIRGNY
Trigger: ATAATTTCCTCTGATTATTCAAGTCGTGGGACAGGT...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATCCCCAGATGCCTCTCTaGGAAGTTCATTATTTGATA +
Preference number: 2 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDPQMPL*EVHYLI
Trigger: TATCAAATAATGAACTTCTCAGAGAGGCATCTGGGG...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCTCTTTCCTTCTTGTaGATATCATGCTGGAGTTAC +
Preference number: 2 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMSLSFL*ISCWSY
Trigger: GTAACTCCAGCATGATATTCACAAGAAGGAAAGAGA...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATAGGTACATGCCACTATaGCTGGCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYRYMPL*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATAGTGGCATGTACCT...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATAATAATTCAGGCAATTaGTTGTCTGGGTTCTGCAAT +
Preference number: 2 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYNNSGN*LSGFCN
Trigger: ATTGCAGAACCCAGACAACCAATTGCCTGAATTATT...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 90 bp CTCTTTCCTTCTTGTGAATATCATGCTGGAGTTACAACCACCATTTaGGATCATGTGGCAACACAGGAAAGAAGCCCTGTACTAATGAAG +
Preference number: 2 (lower is better)
Translates to: LFPSCEYHAGVTTTI*DHVATQERSPVLMK
Trigger: CTTCATTAGTACAGGGCTTCTTTCCTGTGTTGCCACATGATCCAAAATGGTGGTTGTAACTCCAGCATGATATTCACAAGAAGGAAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGGTTATCTACAACTTATaGATCTGCCTTTCAGCCTTA +
Preference number: 2 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMVIYNL*ICLSAL
Trigger: TAAGGCTGAAAGGCAGATTCATAAGTTGTAGATAAC...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATGTGATTAAAAACTTGTaGTTTGGAGTTGGAAAGACA +
Preference number: 2 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYVIKNL*FGVGKT
Trigger: TGTCTTTCCAACTCCAAAGCACAAGTTTTTAATCAC...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAAGAAATTATCCAAAGCTaGTTACTGACCCAAAAGGAA +
Preference number: 2 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQEIIQS*LLTQKE
Trigger: TTCCTTTTGGGTCAGTAACCAGCTTTGGATAATTTC...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR TCA 90 bp AGAATTGAGGCTTGGCTGTTCTGGCTGTATACTAACTTCATATACCCTGACAGACACAAGACACAAAATTaGGCAGCAAATGTTTGGGTA +
Preference number: 2 (lower is better)
Translates to: RIEAWLFWLYTNFIYPDRHKTQN*AANVWV
Trigger: TACCCAAACATTTGCTGCTCAATTTTGTGTCTTGTG...TCTGTCAGGGTATATGAAGTTAGTATACAGCCAGAACAGCCAAGCCTCAATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGCTCAATTTGCTAGATTaGTTTAAAGGGGTCAGATTT +
Preference number: 2 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKLNLLD*FKGVRF
Trigger: AAATCTGACCCCTTTAAAGCAATCTAGCAAATTGAG...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATAGGCAATTGGTTGTCTaGGTTCTGCAATTTGAAATA +
Preference number: 2 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDRQLVV*VLQFEI
Trigger: TATTTCAAATTGCAGAACCCAGACAACCAATTGCCT...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 90 bp CTTCCCAGCATGAAACCATGTCTTATCACTCCACCAGATTCAGAATaGGTACTAATTCTGACAGAAGCTGAAACTAAAGCCTATGTTTTC +
Preference number: 2 (lower is better)
Translates to: LPSMKPCLITPPDSE*VLILTEAETKAYVF
Trigger: GAAAACATAGGCTTTAGTTTCAGCTTCTGTCAGAATTAGTACCAATTCTGAATCTGGTGGAGTGATAAGACATGGTTTCATGCTGGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATATCAGAGTAATACATTaGTTACTCTCCACTGATTTG +
Preference number: 2 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDIRVIH*LLSTDL
Trigger: CAAATCAGTGGAGAGTAAGCAATGTATTACTCTGAT...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATAAGGAAATAAAACTTTaGTGCCAGACAAGACAGTAT +
Preference number: 2 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDKEIKL*CQTRQY
Trigger: ATACTGTCTTGTCTGGCACCAAAGTTTTATTTCCTT...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 90 bp TCATTCAGATGTGCTGGTGAGAATATGACAGAAAATCTGTTGAAGTaGTGTACCATGAAGTCTGTCTTTTGTCAAAGTTCTATGCAGTCC +
Preference number: 2 (lower is better)
Translates to: SFRCAGENMTENLLK*CTMKSVFCQSSMQS
Trigger: GGACTGCATAGAACTTTGACAAAAGACAGACTTCATGGTACACAACTTCAACAGATTTTCTGTCATATTCTCACCAGCACATCTGAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR GCA 90 bp AGAATTGAGGCTTGGCTGTTCTGGCTGTATACTAACTTCATATACCCTGACAGAAAGTGCTTTGTACACTaGACAATTATAGCTTTACCA +
Preference number: 2 (lower is better)
Translates to: RIEAWLFWLYTNFIYPDRKCFVH*TIIALP
Trigger: TGGTAAAGCTATAATTGTGCAGTGTACAAAGCACTT...TCTGTCAGGGTATATGAAGTTAGTATACAGCCAGAACAGCCAAGCCTCAATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 90 bp AAAGCCTCATTCAGATGTGCTGGTGAGAATATGACAGAAAATCTGTaGAAGTTGTGTACCATGAAGTCTGTCTTTTGTCAAAGTTCTATG +
Preference number: 2 (lower is better)
Translates to: KASFRCAGENMTENL*KLCTMKSVFCQSSM
Trigger: CATAGAACTTTGACAAAAGACAGACTTCATGGTACACAACTTCAACAGATTTTCTGTCATATTCTCACCAGCACATCTGAATGAGGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 90 bp TACATTGCTTACTCTCCACTGATTTGTACACTGGAAAAATGTTGTTaGCTGCAGTGTAGTAGCTACATATCATTCTTTAGTCCTTTACAT +
Preference number: 2 (lower is better)
Translates to: YIAYSPLICTLEKCC*LQCSSYISFFSPLH
Trigger: ATGTAAAGGACTAAAGAATGATATGTAGCTACTACACTGCAGCAAACAACATTTTTCCAGTGTACAAATCAGTGGAGAGTAAGCAATGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 90 bp ATTAAACATGTGGAGTTTTCACATGTTCCTGGCATTATTTATAATTaGAGGTGTTTCACCGACATCAGAGTAATACATTGCTTACTCTCC +
Preference number: 2 (lower is better)
Translates to: IKHVEFSHVPGIIYN*RCFTDIRVIHCLLS
Trigger: GGAGAGTAAGCAATGTATTACTCTGATGTCGGTGAAACACCTCAAATTATAAATAATGCCAGGAACATGTGAAAACTCCACATGTTTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR GCA 72 bp CTTGGCTGGGCTCCTATCCGACAGCCAGAACAAACTTaGCAGCCATGTGAGTCATCTGAAAGTGGGACCCCC +
Preference number: 3 (lower is better)
Translates to: LGWAPIRQPEQT*QPCESSESGTP
Trigger: GGGGGTCCCACTTTCAGATGACTCACATGGCTGGCAAGTTTGTTCTGGCTGTCGGATAGGAGCCCAGCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 72 bp TGTGAGTCATCTGAAAGTGGGACCCCCAGATCCAGTTaGACTGCCCAGCCAATGCCGTGTGGGAGAGAGTTG +
Preference number: 3 (lower is better)
Translates to: CESSESGTPRSS*TAQPMPCGREL
Trigger: CAACTCTCTCCCACACGGCATTGGCTGGGCAGTTCAACTGGATCTGGGGGTCCCACTTTCAGATGACTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 72 bp CCCCAGATCCAGTTGAACTGCCCAGCCAATGCCGTGTaGGAGAGAGTTGAACCATTTGCACTGAGCCTCATG +
Preference number: 3 (lower is better)
Translates to: PQIQLNCPANAV*ERVEPFALSLM
Trigger: CATGAGGCTCAGTGCAAATGGTTCAACTCTCTCCCACACGGCATTGGCTGGGCAGTTCAACTGGATCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 72 bp CCCAGCTTGGCGGGAGAGAATGCTAAGCATGATGAGTaGGATCTGCCACAGGCACGGATATTTCCTGCTCCT +
Preference number: 3 (lower is better)
Translates to: PSLAGENAKHDE*DLPQARIFPAP
Trigger: AGGAGCAGGAAATATCCGTGCCTGTGGCAGATCTCACTCATCATGCTTAGCATTCTCTCCCGCCAAGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 72 bp ACACCCATCCAATCAGGTTTTCTCTCTTGGGAAGTGTaGACACTGGATGCCTCCAGGGGTGGGCCACTTGAG +
Preference number: 3 (lower is better)
Translates to: TPIQSGFLSWEV*TLDASRGGPLE
Trigger: CTCAAGTGGCCCACCCCTGGAGGCATCCAGTGTTCACACTTCCCAAGAGAGAAAACCTGATTGGATGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 72 bp TGGGACACTTGCTCTTGGAACTCAGCTGCCATGCTGTaGAGAAGCCCAAGGAGTCTATGGAGAGGCCCACAT +
Preference number: 3 (lower is better)
Translates to: WDTCSWNSAAML*RSPRSLWRGPH
Trigger: ATGTGGGCCTCTCCATAGACTCCTTGGGCTTCTTCACAGCATGGCAGCTGAGTTCCAAGAGCAAGTGTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 72 bp GTCTACAAGTTACCAAACGCCACCTCATCAGGACTGTaGACCCCTCTCACTGTGTCTTCTTGGCAGGCAGAG +
Preference number: 3 (lower is better)
Translates to: VYKLPNATSSGL*TPLTVSSWQAE
Trigger: CTCTGCCTGCCAAGAAGACACAGTGAGAGGGGTCCACAGTCCTGATGAGGTGGCGTTTGGTAACTTGTAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 72 bp CCTACATCAAGGTGGATCCAGGCTGTGGTCTTGCATTaGGTAACAAAGCCCTTCCCAGAGGGAGGAGTCACA +
Preference number: 3 (lower is better)
Translates to: PTSRWIQAVVLH*VTKPFPEGGVT
Trigger: TGTGACTCCTCCCTCTGGGAAGGGCTTTGTTACCCAATGCAAGACCACAGCCTGGATCCACCTTGATGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 72 bp TGCCTGGCTGTCAATATCAAGGTGGATCCAGGCTGTTaGAACTGGTGGATCCAGGGGTTGGAACGGAGGAAT +
Preference number: 3 (lower is better)
Translates to: CLAVNIKVDPGC*NWWIQGLERRN
Trigger: ATTCCTCCGTTCCAACCCCTGGATCCACCAGTTCCAACAGCCTGGATCCACCTTGATATTGACAGCCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 72 bp TTCACTGGGCTGGCAGGAAAGCTATTTAAAAGTGGCTaGCCTACTTGGGAGGCTCACCCTTGTGCTGGTTCC +
Preference number: 3 (lower is better)
Translates to: FTGLAGKLFKSG*PTWEAHPCAGS
Trigger: GGAACCAGCACAAGGGTGAGCCTCCCAAGTAGGTCAGCCACTTTTAAATAGCTTTCCTGCCAGCCCAGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR GCA 72 bp TCCATTGCTAGAGCTGCGGTGATCAGCAGAAGCATCTaGCTGGCTGTCAATATCAAGGTGGATCCAGGCTGT +
Preference number: 3 (lower is better)
Translates to: SIARAAVISRSI*LAVNIKVDPGC
Trigger: ACAGCCTGGATCCACCTTGATATTGACAGCCAGGCAGATGCTTCTGCTGATCACCGCAGCTCTAGCAATGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR GCA 72 bp TGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACTaGATGCTCTTTGGGTCCATGCTGTCTCCAGTCTGG +
Preference number: 3 (lower is better)
Translates to: WSRCILSLTLWD*MLFGSMLSPVW
Trigger: CCAGACTGGAGACAGCATGGACCCAAAGAGCATGCAGTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGGGTGGATCCAGGCTGTaGGAACTGGTGGATCCAGGG +
Preference number: 3 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMGGSRL*ELVDPG
Trigger: CCCTGGATCCACCAGTTCCAACAGCCTGGATCCACC...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATGGCTGTGGTCTTGCATaGGGTAACAAAGCCCTTCCC +
Preference number: 3 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYGCGLA*GNKALP
Trigger: GGGAAGGGCTTTGTTACCCAATGCAAGACCACAGCC...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTGCAGTGGCTCAGTCTaGGCACTCACTGCAAACCCC +
Preference number: 3 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMCSGSV*ALTANP
Trigger: GGGGTTTGCAGTGAGTGCCAAGACTGAGCCACTGCA...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 72 bp GTTGAACTGCCCAGCCAATGCCGTGTGGGAGAGAGTTaGACCATTTGCACTGAGCCTCATGCAAATTGCAGA +
Preference number: 3 (lower is better)
Translates to: VELPSQCRVGES*TICTEPHANCR
Trigger: TCTGCAATTTGCATGAGGCTCAGTGCAAATGGTTCAACTCTCTCCCACACGGCATTGGCTGGGCAGTTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR GCA 72 bp TGGCGGGAGAGAATGCTAAGCATGATGAGTGAGATCTaGCACAGGCACGGATATTTCCTGCTCCTCTTCTGT +
Preference number: 3 (lower is better)
Translates to: WRERMLSMMSEI*HRHGYFLLLFC
Trigger: ACAGAAGAGGAGCAGGAAATATCCGTGCCTGTGGCAGATCTCACTCATCATGCTTAGCATTCTCTCCCGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGCTGTTCCCTGCTGCCTaGCAGAGATTGGCCAATGAG +
Preference number: 3 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMLFPAA*QRLANE
Trigger: CTCATTGGCCAATCTCTGCAAGGCAGCAGGGAACAG...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 72 bp GCTGTCAATATCAAGGTGGATCCAGGCTGTTGGAACTaGTGGATCCAGGGGTTGGAACGGAGGAATACTAAA +
Preference number: 3 (lower is better)
Translates to: AVNIKVDPGCWN*WIQGLERRNTK
Trigger: TTTAGTATTCCTCCGTTCCAACCCCTGGATCCACCAGTTCCAACAGCCTGGATCCACCTTGATATTGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGATCCAGGCTGTGGTCTaGCATTGGGTAACAAAGCCC +
Preference number: 3 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKIQAVV*HWVTKP
Trigger: GGGCTTTGTTACCCAATGCAAGACCACAGCCTGGAT...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACAATGAGACTTGGAACTaGGAAGGCCTACACCACGAG +
Preference number: 3 (lower is better)
Translates to: DPHDECWSRCILSLTLWDNETWN*EGLHHE
Trigger: CTCGTGGTGTAGGCCTTCCAAGTTCCAAGTCTCATT...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 72 bp CCCTCTCACTGTGTCTTCTTGGCAGGCAGAGCTTACTaGCCCCCTGGGATGGTGTATTCATTAAAATACTTG +
Preference number: 3 (lower is better)
Translates to: PSHCVFLAGRAY*PPGMVYSLKYL
Trigger: CAAGTATTTTAATGAATACACCATCCCAGGGGGTCAGTAAGCTCTGCCTGCCAAGAAGACACAGTGAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 72 bp TCCCTTATCCCACTTGCTCTTCTCATAATGTGGCTTTaGCACGCCTCCAAGGACAAGTGGGGTTTATGTCCT +
Preference number: 3 (lower is better)
Translates to: SLIPLALLIMWL*HASKDKWGLCP
Trigger: AGGACATAAACCCCACTTGTCCTTGGAGGCGTGTCAAAGCCACATTATGAGAAGAGCAAGTGGGATAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 72 bp TGGATCCAGGCTGTTGGAACTGGTGGATCCAGGGGTTaGAACGGAGGAATACTAAAAATGAGACTTGGAACT +
Preference number: 3 (lower is better)
Translates to: WIQAVGTGGSRG*NGGILKMRLGT
Trigger: AGTTCCAAGTCTCATTTTTAGTATTCCTCCGTTCCAACCCCTGGATCCACCAGTTCCAACAGCCTGGATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 72 bp TTTGCTGTTCTCCACACTCCTATATACATTCTAGGCTaGAGTATCCTGCAAGCCAGCACGACTATGGCTGTG +
Preference number: 3 (lower is better)
Translates to: FAVLHTPIYILG*SILQASTTMAV
Trigger: CACAGCCATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGGAGAACAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 72 bp AGGGGTCTATGTCCAAGCCAAAGAGCACATAGGCACTaGGATTCAGGGAGGTCAAATATCCACAATGTTCCT +
Preference number: 3 (lower is better)
Translates to: RGLCPSQRAHRH*DSGRSNIHNVP
Trigger: AGGAACATTGTGGATATTTGACCTCCCTGAATCCCAGTGCCTATGTGCTCTTTGGCTTGGACATAGACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACAGGAGGCAACACATGTaGATCAGAAGTGAGCACATC +
Preference number: 3 (lower is better)
Translates to: DPHDECWSRCILSLTLWDRRQHM*IRSEHI
Trigger: GATGTGCTCACTTCTGATCAACATGTGTTGCCTCCT...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGGCTGTGGTGGGAGGATaGCTTGAACCTAGAAGTTCA +
Preference number: 3 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKAVVGG*LEPRSS
Trigger: TGAACTTCTAGGTTCAAGCAATCCTCCCACCACAGC...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp AGAATTGAGGCTTGGCTGTTCTGGCTGTATACTAACTTCATATACCCTGACAGACAGGGGCTGCTTCTCTaGGAAAACATGAGCGCCATT +
Preference number: 3 (lower is better)
Translates to: RIEAWLFWLYTNFIYPDRQGLLL*ENMSAI
Trigger: AATGGCGCTCATGTTTTCCAAGAGAAGCAGCCCCTG...TCTGTCAGGGTATATGAAGTTAGTATACAGCCAGAACAGCCAAGCCTCAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTCTGCTATATGTGAAGTaGTTCTGGACTGCCTGTTAT +
Preference number: 3 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLLLYVK*FWTACY
Trigger: ATAACAGGCAGTCCAGAACAACTTCACATATAGCAG...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTCTGGAAAAATGTTGTTaGCTGCAGTGTAGTAGCTAC +
Preference number: 3 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLLEKCC*LQCSSY
Trigger: GTAGCTACTACACTGCAGCAAACAACATTTTTCCAG...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATACTTGTGCTTTGGAGTaGGAAAGACATGGAACAAGG +
Preference number: 3 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYTCALE*ERHGTR
Trigger: CCTTGTTCCATGTCTTTCCAACTCCAAAGCACAAGT...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR GCA 72 bp TTCCTAACTGATCCACATGATGAATGCTGGTCAAGATaGATCCTTTCCCTAACTCTGTGGGACTGCATGCTC +
Preference number: 3 (lower is better)
Translates to: FLTDPHDECWSR*ILSLTLWDCML
Trigger: GAGCATGCAGTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATCAGTTAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 72 bp GTCAATATCAAGGTGGATCCAGGCTGTTGGAACTGGTaGATCCAGGGGTTGGAACGGAGGAATACTAAAAAT +
Preference number: 3 (lower is better)
Translates to: VNIKVDPGCWNW*IQGLERRNTKN
Trigger: ATTTTTAGTATTCCTCCGTTCCAACCCCTGGATCCACCAGTTCCAACAGCCTGGATCCACCTTGATATTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp TTGGGAAGTAAGCCACTGTGCCTGGCTGGGACCACTTCTAATATGAGGCTTACACTGAGGATTCTCAATTaGCTAGATTGCTTTAAAGGG +
Preference number: 3 (lower is better)
Translates to: LGSKPLCLAGTTSNMRLTLRILN*LDCFKG
Trigger: CCCTTTAAAGCAATCTAGCAAATTGAGAATCCTCAG...TGTAAGCCTCATATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp TTGGGAAGTAAGCCACTGTGCCTGGCTGGGACCACTTCTAATATGAGGCTTACATCAGAAGGCAAATACTaGTTAAAGGGATCCCAAAAG +
Preference number: 3 (lower is better)
Translates to: LGSKPLCLAGTTSNMRLTSEGKY*LKGSQK
Trigger: CTTTTGGGATCCCTTTAACAAGTATTTGCCTTCTGA...TGTAAGCCTCATATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTGAACTCTTTTGGTCATaGTCACATAGCAGAAATGCT +
Preference number: 3 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLELFWS*SHSRNA
Trigger: AGCATTTCTGCTATGTGACAATGACCAAAAGAGTTC...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTAAAGCAGGCCCCTTTTaGAATTGGTATTGTTTCGTT +
Preference number: 3 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLKAGPF*NWYCFV
Trigger: AACGAAACAATACCAATTCAAAAAGGGGCCTGCTTT...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGCTATGCATTTCTACTTaGCTCTCTTGGGACACTTGC +
Preference number: 3 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMLCIST*LSWDTC
Trigger: GCAAGTGTCCCAAGAGAGCAAAGTAGAAATGCATAG...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 72 bp GCATTAGGGCAGACTTTCAAGCACAAGACACAAAATTaGGCAGCAAATGTTTGGGTAGTCCCATCTCCCTTC +
Preference number: 3 (lower is better)
Translates to: ALGQTFKHKTQN*AANVWVVPSPF
Trigger: GAAGGGAGATGGGACTACCCAAACATTTGCTGCTCAATTTTGTGTCTTGTGCTTGAAAGTCTGCCCTAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 72 bp CCTCTGGCTTCCTTTTCTTGTTTCCACGCTGAGCAGTaGGCAAGAGAAAGAGTCTCTTTCCAGAAGATTTAC +
Preference number: 3 (lower is better)
Translates to: PLASFSCFHAEQ*ARERVSFQKIY
Trigger: GTAAATCTTCTGGAAAGAGACTCTTTCTCTTGCTCACTGCTCAGCGTGGAAACAAGAAAAGGAAGCCAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504064.1
3UTR CCA 72 bp GATGTATGTTTAGTGTTTAGCACCTTCTGGCCAGGGTaGCTACCTCTTCAGATACCCAATATTCTTCCACCA +
Preference number: 3 (lower is better)
Translates to: DVCLVFSTFWPG*LPLQIPNILPP
Trigger: TGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGTGCTAAACACTAAACATACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 72 bp TTGGTAAAACTAGTTCTACCACCTACTACAGACTACTaGACCAGGGGTCTATGTCCAAGCCAAAGAGCACAT +
Preference number: 3 (lower is better)
Translates to: LVKLVLPPTTDY*TRGLCPSQRAH
Trigger: ATGTGCTCTTTGGCTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGCCATATGAGCTCACCTaGAATCAGGAACTTAATTCC +
Preference number: 3 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMPYELT*NQELNS
Trigger: GGAATTAAGTTCCTGATTCAAGGTGAGCTCATATGG...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 72 bp CCAATGCCGTGTGGGAGAGAGTTGAACCATTTGCACTaGGCCTCATGCAAATTGCAGATTTGTGTGAAAAAT +
Preference number: 3 (lower is better)
Translates to: PMPCGRELNHLH*ASCKLQICVKN
Trigger: ATTTTTCACACAAATCTGCAATTTGCATGAGGCTCAGTGCAAATGGTTCAACTCTCTCCCACACGGCATTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGCTTTATCACATTTGTTaGATGTGGGTTATCCAGGAG +
Preference number: 3 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKLYHIC*MWVIQE
Trigger: CTCCTGGATAACCCACATCAAACAAATGTGATAAAG...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATCTTCCTGCCTGTTGTTaGTCAATAATACTGACTGGT +
Preference number: 3 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDLPACC*SIILTG
Trigger: ACCAGTCAGTATTATTGACAAACAACAGGCAGGAAG...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACAAATCTTCCTGCCTGTaGTTTGTCAATAATACTGAC +
Preference number: 3 (lower is better)
Translates to: DPHDECWSRCILSLTLWDKSSCL*FVNNTD
Trigger: GTCAGTATTATTGACAAACAACAGGCAGGAAGATTT...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 72 bp CATCAACATGAAGTTCCAGGACCCCAGATGCCTCTCTaGGAAGTTCATTATTTGATAGGGTTGGATCAAATG +
Preference number: 3 (lower is better)
Translates to: HQHEVPGPQMPL*EVHYLIGLDQM
Trigger: CATTTGATCCAACCCTATCAAATAATGAACTTCTCAGAGAGGCATCTGGGGTCCTGGAACTTCATGTTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 72 bp TATGTGTCTGATCCACCTACAACCCATTCAGTCCCATaGCTCATGACTCATGTAGTTGGTAAAACTAGTTCT +
Preference number: 3 (lower is better)
Translates to: YVSDPPTTHSVP*LMTHVVGKTSS
Trigger: AGAACTAGTTTTACCAACTACATGAGTCATGAGCCATGGGACTGAATGGGTTGTAGGTGGATCAGACACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp AGAATTGAGGCTTGGCTGTTCTGGCTGTATACTAACTTCATATACCCTGACAGACCTAGTACTTCTCAATaGCACATTCTTCCAAGTGCA +
Preference number: 3 (lower is better)
Translates to: RIEAWLFWLYTNFIYPDRPSTSQ*HILPSA
Trigger: TGCACTTGGAAGAATGTGCAATTGAGAAGTACTAGG...TCTGTCAGGGTATATGAAGTTAGTATACAGCCAGAACAGCCAAGCCTCAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATCATGAAGTCTGTCTTTaGTCAAAGTTCTATGCAGTC +
Preference number: 3 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDHEVCL*SKFYAV
Trigger: GACTGCATAGAACTTTGACAAAAGACAGACTTCATG...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGTATCCACAATGTTCCTaGACACGAAACTACCTAATA +
Preference number: 3 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKYPQCS*TRNYLI
Trigger: TATTAGGTAGTTTCGTGTCAAGGAACATTGTGGATA...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 72 bp CAAGGATGTCAAAAATATCACATAGAATGTCATCTCTaGTGGACTGACAGAGACCTCCTGTTGTGCTGTGTT +
Preference number: 3 (lower is better)
Translates to: QGCQKYHIECHL*WTDRDLLLCCV
Trigger: AACACAGCACAACAGGAGGTCTCTGTCAGTCCATCAGAGATGACATTCTATGTGATATTTTTGACATCCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 72 bp TATATTTCCTCGATATTGCATGAAGACACACCAATTTaGGCAGATCACATTTTCCAACGGTGCCTGCAACAA +
Preference number: 3 (lower is better)
Translates to: YISSILHEDTPI*ADHIFQRCLQQ
Trigger: TTGTTGCAGGCACCGTTGGAAAATGTGATCTGCCCAAATTGGTGTGTCTTCATGCAATATCGAGGAAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR-3UTR CAA 90 bp AGAATTGAGGCTTGGCTGTTCTGGCTGTATACTAACTTCATATACCCTGACAGATACCTGTCCCACGACTaGAATAATCAGAGGAAATTA +
Preference number: 3 (lower is better)
Translates to: RIEAWLFWLYTNFIYPDRYLSHD*NNQRKL
Trigger: TAATTTCCTCTGATTATTCAAGTCGTGGGACAGGTA...TCTGTCAGGGTATATGAAGTTAGTATACAGCCAGAACAGCCAAGCCTCAATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 72 bp CACCGACATCAGAGTAATACATTGCTTACTCTCCACTaGTTTGTACACTGGAAAAATGTTGTTTGCTGCAGT +
Preference number: 3 (lower is better)
Translates to: HRHQSNTLLTLH*FVHWKNVVCCS
Trigger: ACTGCAGCAAACAACATTTTTCCAGTGTACAAATCAGTGGAGAGTAAGCAATGTATTACTCTGATGTCGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 72 bp TTGAATAATCAGAGGAAATTATCCAAAGCTGGTTACTaGCCCAAAAGGAAACCATCGATAAAACAGCTTCCT +
Preference number: 3 (lower is better)
Translates to: LNNQRKLSKAGY*PKRKPSIKQLP
Trigger: AGGAAGCTGTTTTATCGATGGTTTCCTTTTGGGTCAGTAACCAGCTTTGGATAATTTCCTCTGATTATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 72 bp ACACGAAACTACCTAATATATTTCCTCGATATTGCATaGAGACACACCAATTTGGGCAGATCACATTTTCCA +
Preference number: 3 (lower is better)
Translates to: TRNYLIYFLDIA*RHTNLGRSHFP
Trigger: TGGAAAATGTGATCTGCCCAAATTGGTGTGTCTTCATGCAATATCGAGGAAATATATTAGGTAGTTTCGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR TCA 72 bp TTTCTCTCCACCTCCACTTGCTTGTTAGTTCAATTATaGTCGTTCTCTGCTTCCTTCCATATTGGATTTAAT +
Preference number: 3 (lower is better)
Translates to: FLSTSTCLLVQL*SFSASFHIGFN
Trigger: ATTAAATCCAATATGGAAGGAAGCAGAGAACGATCATAATTGAACTAACAAGCAAGTGGAGGTGGAGAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR GCA 72 bp AATTTGAGGTGTTTCACCGACATCAGAGTAATACATTaGTTACTCTCCACTGATTTGTACACTGGAAAAATG +
Preference number: 3 (lower is better)
Translates to: NLRCFTDIRVIH*LLSTDLYTGKM
Trigger: CATTTTTCCAGTGTACAAATCAGTGGAGAGTAAGCAATGTATTACTCTGATGTCGGTGAAACACCTCAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR GCA 72 bp CTTGACACGAAACTACCTAATATATTTCCTCGATATTaGATGAAGACACACCAATTTGGGCAGATCACATTT +
Preference number: 3 (lower is better)
Translates to: LDTKLPNIFPRY*MKTHQFGQITF
Trigger: AAATGTGATCTGCCCAAATTGGTGTGTCTTCATGCAATATCGAGGAAATATATTAGGTAGTTTCGTGTCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CCA 72 bp AGTAATAAAAAGACACAAGGTACAAGAATTGAGGCTTaGCTGTTCTGGCTGTATACTAACTTCATATACCCT +
Preference number: 3 (lower is better)
Translates to: SNKKTQGTRIEA*LFWLYTNFIYP
Trigger: AGGGTATATGAAGTTAGTATACAGCCAGAACAGCCAAGCCTCAATTCTTGTACCTTGTGTCTTTTTATTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp ACCCTCAGAGGCAGCGATGGATGGCAGCCAGGCCTTTTCCTAGTACTTCTCAATGCGCGCTCAGGATGCTaGGCCGGGCTGCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: TLRGSDGWQPGLFLVLLNARSGC*AGLQPL
Trigger: GAGAGGCTGCAGCCCGGCGCAGCATCCTGAGCGCGC...ATTGAGAAGTACTAGGAAAAGGCCTGGCTGCCATCCATCGCTGCCTCTGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp AGGGGTAGTTTATCGCCCGCTGTTTTCCCTGCAGCTCTTTCAGAGAGACCTCACGCGCGCTCAGGATGCTaGGCCGGGCTGCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: RGSLSPAVFPAALSERPHARSGC*AGLQPL
Trigger: GAGAGGCTGCAGCCCGGCGCAGCATCCTGAGCGCGC...GTGAGGTCTCTCTGAAAGAGCTGCAGGGAAAACAGCGGGCGATAAACTACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504064.1
CDS-3UTR GCA 90 bp ACCCTCAGAGGCAGCGATGGATGGCAGCCAGGCCTTTTCCTAGTACTTCTCAATGAGGCGCGCTCAGGATaGTGCGCCGGGCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TLRGSDGWQPGLFLVLLNEARSG*CAGLQP
Trigger: AGGCTGCAGCCCGGCGCAGCATCCTGAGCGCGCCTC...ATTGAGAAGTACTAGGAAAAGGCCTGGCTGCCATCCATCGCTGCCTCTGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGGCTGCGCGGGGAGCCTaGATGTCCGCTCGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMAARGA*MSARLG
Trigger: GCCGAGGCGAGCGGACATGCAGGCTCCCCGCGCAGC...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp CTCCCACCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGCAGGGGTGGGCCACTTaGGCTCAGGCTGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: LPPAHTSYLHVTSKGGMVQGWAT*AQAESQ
Trigger: TTGGGATTCAGCCTGAGCTCAAGTGGCCCACCCCTG...CACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGGTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp TGCAGCTCTTACAAAGCTCCATCTCAAACCCCTATTCCATTTTCCCTCCAACAAGAGGCGCGCTCAGGATaGTGCGCCGGGCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: CSSYKAPSQTPIPFSLQQEARSG*CAGLQP
Trigger: AGGCTGCAGCCCGGCGCAGCATCCTGAGCGCGCCTC...TTGTTGGAGGGAAAATGGAATAGGGGTTTGAGATGGAGCTTTGTAAGAGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504064.1
3UTR CAA 72 bp CTGCCTGGCTGTCAATATCAAGGTGGATCCAGGCTGTaGGAACTGGTGGATCCAGGGGTTGGAACGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LPGCQYQGGSRL*ELVDPGVGTEE
Trigger: TTCCTCCGTTCCAACCCCTGGATCCACCAGTTCCAACAGCCTGGATCCACCTTGATATTGACAGCCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp ACCCTCAGAGGCAGCGATGGATGGCAGCCAGGCCTTTTCCTAGTACTTCTCAATCCAAGATCATGCCACTaGACTCCAGCCAGGGCAACA +
Preference number: 4 (lower is better)
Translates to: TLRGSDGWQPGLFLVLLNPRSCH*TPARAT
Trigger: TGTTGCCCTGGCTGGAGTGCAGTGGCATGATCTTGG...ATTGAGAAGTACTAGGAAAAGGCCTGGCTGCCATCCATCGCTGCCTCTGAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp ACCCTCAGAGGCAGCGATGGATGGCAGCCAGGCCTTTTCCTAGTACTTCTCAATACAATCTTGGCTCACTaGAACTGCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: TLRGSDGWQPGLFLVLLNTILAH*NCRLLG
Trigger: ACCCAGGAGGCGGCAGTTGCAGTGAGCCAAGATTGT...ATTGAGAAGTACTAGGAAAAGGCCTGGCTGCCATCCATCGCTGCCTCTGAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp ACCCTCAGAGGCAGCGATGGATGGCAGCCAGGCCTTTTCCTAGTACTTCTCAATCATGTTGATCAGAAGTaGGCACATCACCCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TLRGSDGWQPGLFLVLLNHVDQK*AHHPPP
Trigger: AGGAGGCGGGTGATGTGCTCACTTCTGATCAACATG...ATTGAGAAGTACTAGGAAAAGGCCTGGCTGCCATCCATCGCTGCCTCTGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTGCAGGCAGAGCTTACTaGCCCCCTGGGATGGTGTAT +
Preference number: 4 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLAGRAY*PPGMVY
Trigger: ATACACCATCCCAGGGGGTCAGTAAGCTCTGCCTGC...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp CTCCCACCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGGGCAAGAGAATTGCTTaGACCTGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LPPAHTSYLHVTSKGGMVGKRIA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGCAATTCTCTTGCC...CACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGGTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTAGGTGGAGGCTGCAGTaGGCCAAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLRWRLQ*AKIMPL
Trigger: CAGTGGCATGATCTTGGCTCACTGCAGCCTCCACCT...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp CTCCCACCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGCCAGGCTGTTGGAACTaGTGGATCCAGGGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: LPPAHTSYLHVTSKGGMVPGCWN*WIQGLE
Trigger: TTCCAACCCCTGGATCCACCAGTTCCAACAGCCTGG...CACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGGTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp TTGGGAAGTAAGCCACTGTGCCTGGCTGGGACCACTTCTAATATGAGGCTTACAGCAGTGGCTCAGTCTTaGCACTCACTGCAAACCCCG +
Preference number: 4 (lower is better)
Translates to: LGSKPLCLAGTTSNMRLTAVAQS*HSLQTP
Trigger: CGGGGTTTGCAGTGAGTGCCAAGACTGAGCCACTGC...TGTAAGCCTCATATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp TTGGGAAGTAAGCCACTGTGCCTGGCTGGGACCACTTCTAATATGAGGCTTACACAGCCTGCAGTGCAGTaGCTCAGTCTTGGCACTCAC +
Preference number: 4 (lower is better)
Translates to: LGSKPLCLAGTTSNMRLTQPAVQ*LSLGTH
Trigger: GTGAGTGCCAAGACTGAGCCACTGCACTGCAGGCTG...TGTAAGCCTCATATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACGGGAAGTGTGAACACTaGATGCCTCCAGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: DPHDECWSRCILSLTLWDGKCEH*MPPGVG
Trigger: GCCCACCCCTGGAGGCATCCAGTGTTCACACTTCCC...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTGGAAGTAAGCCACTGTaGCTGGCTGGGACCACTTCT +
Preference number: 4 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLGSKPL*LAGTTS
Trigger: AGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCC...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp TTGGGAAGTAAGCCACTGTGCCTGGCTGGGACCACTTCTAATATGAGGCTTACATTGGCTCACTGCAACTaGCGCCTCCTGGGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: LGSKPLCLAGTTSNMRLTLAHCN*RLLGSS
Trigger: ACTTGAACCCAGGAGGCGGCAGTTGCAGTGAGCCAA...TGTAAGCCTCATATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATAGTCTTGGCACTCACTaGAAACCCCGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYSLGTH*KPRLPG
Trigger: ACCTGGGAGGCGGGGTTTGCAGTGAGTGCCAAGACT...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTGGAGGCTCACCCTTGTaGTGGTTCCCTCTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLGGSPL*WFPLFP
Trigger: AGGAAAGAGAGGGAACCAGCACAAGGGTGAGCCTCC...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATAGTGTGAACACTGGATaGCTCCAGGGGTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYSVNTG*LQGWAT
Trigger: AGTGGCCCACCCCTGGAGGCATCCAGTGTTCACACT...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATGTGGATCCAGGCTGTTaGAACTGGTGGATCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYVDPGC*NWWIQG
Trigger: CCCCTGGATCCACCAGTTCCAACAGCCTGGATCCAC...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp CTCCCACCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGGGCTCACCCTTGTGCTaGTTCCCTCTCTTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LPPAHTSYLHVTSKGGMVGSPLC*FPLFPS
Trigger: AGAAGGAAAGAGAGGGAACCAGCACAAGGGTGAGCC...CACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGGTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp ACCCTCAGAGGCAGCGATGGATGGCAGCCAGGCCTTTTCCTAGTACTTCTCAATGCAGAGTTGCTTCACTaGGCTGGCAGGAAAGCTATT +
Preference number: 4 (lower is better)
Translates to: TLRGSDGWQPGLFLVLLNAELLH*AGRKAI
Trigger: AATAGCTTTCCTGCCAGCCCAGTGAAGCAACTCTGC...ATTGAGAAGTACTAGGAAAAGGCCTGGCTGCCATCCATCGCTGCCTCTGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAAGACCACAGGCTTGGCTaGGCTCCTATCCGACAGCCA +
Preference number: 4 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQDHRLG*APIRQP
Trigger: TGGCTGTCGGATAGGAGCCCAGCCAAGCCTGTGGTC...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp ACCCTCAGAGGCAGCGATGGATGGCAGCCAGGCCTTTTCCTAGTACTTCTCAATAAGTTGAGGCTGCAGTaGGCCATAATCACACCATTG +
Preference number: 4 (lower is better)
Translates to: TLRGSDGWQPGLFLVLLNKLRLQ*AIITPL
Trigger: CAATGGTGTGATTATGGCTCACTGCAGCCTCAACTT...ATTGAGAAGTACTAGGAAAAGGCCTGGCTGCCATCCATCGCTGCCTCTGAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACCTCTCTTGGGAAGTGTaGACACTGGATGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: DPHDECWSRCILSLTLWDLSWEV*TLDASR
Trigger: CCTGGAGGCATCCAGTGTTCACACTTCCCAAGAGAG...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp ACCCTCAGAGGCAGCGATGGATGGCAGCCAGGCCTTTTCCTAGTACTTCTCAATCAGATGACTCCCACCTaGACATACTTCCTACCTACA +
Preference number: 4 (lower is better)
Translates to: TLRGSDGWQPGLFLVLLNQMTPT*TYFLPT
Trigger: TGTAGGTAGGAAGTATGTGCAGGTGGGAGTCATCTG...ATTGAGAAGTACTAGGAAAAGGCCTGGCTGCCATCCATCGCTGCCTCTGAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAACTGGGAGGTGGAGGCTaGAGTGAGCCAAGATCATGC +
Preference number: 4 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQLGGGG*SEPRSC
Trigger: GCATGATCTTGGCTCACTGCAGCCTCCACCTCCCAG...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp CTCCCACCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAGATGTAAGCAGAGTTaGTTCACTGGGCTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LPPAHTSYLHVTSKGGMVRCKQS*FTGLAG
Trigger: TCCTGCCAGCCCAGTGAAGCAACTCTGCTTACATCT...CACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGGTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp CTCCCACCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGGGGTCCTGCCTTCACTaGCTCTGTTCCTTCTTATCT +
Preference number: 4 (lower is better)
Translates to: LPPAHTSYLHVTSKGGMVGSCLH*LCSFLS
Trigger: AGATAAGAAGGAACAGAGGCAGTGAAGGCAGGACCC...CACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGGTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATCTCTTCATCCTCTGTTaGCAGCCTCAGCAGACTCCC +
Preference number: 4 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYLFILC*QPQQTP
Trigger: GGGAGTCTGCTGAGGCTGCCAACAGAGGATGAAGAG...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACAGAGGCAGCGATGGATaGCAGCCAGGCCTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: DPHDECWSRCILSLTLWDRGSDG*QPGLFL
Trigger: TAGGAAAAGGCCTGGCTGCCATCCATCGCTGCCTCT...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp ACCCTCAGAGGCAGCGATGGATGGCAGCCAGGCCTTTTCCTAGTACTTCTCAATATGGAAAGACCTCTCTaGTCTGGAACTCTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: TLRGSDGWQPGLFLVLLNMERPL*SGTLPL
Trigger: CAAAGGCAGAGTTCCAGACCAGAGAGGTCTTTCCAT...ATTGAGAAGTACTAGGAAAAGGCCTGGCTGCCATCCATCGCTGCCTCTGAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp ACCCTCAGAGGCAGCGATGGATGGCAGCCAGGCCTTTTCCTAGTACTTCTCAATTTTTGGAGGCTGTGGTaGGAGGATTGCTTGAACCTA +
Preference number: 4 (lower is better)
Translates to: TLRGSDGWQPGLFLVLLNFWRLW*EDCLNL
Trigger: TAGGTTCAAGCAATCCTCCCACCACAGCCTCCAAAA...ATTGAGAAGTACTAGGAAAAGGCCTGGCTGCCATCCATCGCTGCCTCTGAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp CTCCCACCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGCTTTCCCTAACTCTGTaGGACTGCATGCTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LPPAHTSYLHVTSKGGMVLSLTL*DCMLFG
Trigger: CCCAAAGAGCATGCAGTCCCACAGAGTTAGGGAAAG...CACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGGTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp GCAGCTCTTACAAAGCTCCATCTCAAACCCCTATTCCATTTTCCCTCCAACAATGATAGTGGGGTTGTCTaGTGGAGGCTAGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: AALTKLHLKPLFHFPSNNDSGVV*WRLGEG
Trigger: GCCCTCCCCTAGCCTCCACCAGACAACCCCACTATC...ATTGTTGGAGGGAAAATGGAATAGGGGTTTGAGATGGAGCTTTGTAAGAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000504064.1
CDS-3UTR TCA 90 bp TTGGGAAGTAAGCCACTGTGCCTGGCTGGGACCACTTCTAATATGAGGCTTACACCAAGGGAGGTATGGTaGAACAAGTGTGAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: LGSKPLCLAGTTSNMRLTPREVW*NKCELC
Trigger: GCAAAGCTCACACTTGTTTCACCATACCTCCCTTGG...TGTAAGCCTCATATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAAGCTAAGCATGATGAGTaGGATCTGCCACAGGCACGG +
Preference number: 4 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQAKHDE*DLPQAR
Trigger: CCGTGCCTGTGGCAGATCTCACTCATCATGCTTAGC...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAATTGCTAGAGCTGCGGTaGTCAGCAGAAGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQLLELR*SAEASA
Trigger: GGCAGATGCTTCTGCTGATCACCGCAGCTCTAGCAA...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACCACCTGTCTCTAACTTaGGAGTCCCTGGACATGCCT +
Preference number: 4 (lower is better)
Translates to: DPHDECWSRCILSLTLWDHLSLT*ESLDMP
Trigger: AGGCATGTCCAGGGACTCTCAAGTTAGAGACAGGTG...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACCACGAGGGCCAATTCTaGCATAAGCCCTATTGCCCA +
Preference number: 4 (lower is better)
Translates to: DPHDECWSRCILSLTLWDHEGQF*HKPYCP
Trigger: TGGGCAATAGGGCTTATGGCAGAATTGGCCCTCGTG...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp ACCCTCAGAGGCAGCGATGGATGGCAGCCAGGCCTTTTCCTAGTACTTCTCAATCTGTGGTGGGAGGATTaGTTGAACCTAGAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: TLRGSDGWQPGLFLVLLNLWWED*LNLEVQ
Trigger: TTGAACTTCTAGGTTCAAGCAATCCTCCCACCACAG...ATTGAGAAGTACTAGGAAAAGGCCTGGCTGCCATCCATCGCTGCCTCTGAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp TTGGGAAGTAAGCCACTGTGCCTGGCTGGGACCACTTCTAATATGAGGCTTACATGTTCCCTGCTGCCTTaGAGAGATTGGCCAATGAGA +
Preference number: 4 (lower is better)
Translates to: LGSKPLCLAGTTSNMRLTCSLLP*RDWPMR
Trigger: TCTCATTGGCCAATCTCTGCAAGGCAGCAGGGAACA...TGTAAGCCTCATATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTATGACTGTTCCCTGCTaGCTTGCAGAGATTGGCCAA +
Preference number: 4 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLMTVPC*LAEIGQ
Trigger: TTGGCCAATCTCTGCAAGGCAGCAGGGAACAGTCAT...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp ACCCTCAGAGGCAGCGATGGATGGCAGCCAGGCCTTTTCCTAGTACTTCTCAATGGGATTACAGGTACATaGCACTATGCCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: TLRGSDGWQPGLFLVLLNGITGT*HYAWLI
Trigger: AATTAGCCAGGCATAGTGGCATGTACCTGTAATCCC...ATTGAGAAGTACTAGGAAAAGGCCTGGCTGCCATCCATCGCTGCCTCTGAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp TTTGCAACCAGGAGGCAAATGCAGCTCTTACAAAGCTCCATCTCAAACCCCTATGCCCGCTGTTTTCCCTaGAGCTCTTTCAGAGAGACC +
Preference number: 4 (lower is better)
Translates to: FATRRQMQLLQSSISNPYARCFP*SSFRET
Trigger: GGTCTCTCTGAAAGAGCTGCAGGGAAAACAGCGGGC...ATAGGGGTTTGAGATGGAGCTTTGTAAGAGCTGCATTTGCCTCCTGGTTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504064.1
CDS-3UTR CCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACACCTCATCAGGACTGTaGACCCCTCTCACTGTGTCT +
Preference number: 4 (lower is better)
Translates to: DPHDECWSRCILSLTLWDTSSGL*TPLTVS
Trigger: AGACACAGTGAGAGGGGTCCACAGTCCTGATGAGGT...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAAGCAACTGCCGCCTCCTaGGTTCAAGTGATTCTTGGG +
Preference number: 4 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQATAAS*VQVILG
Trigger: CCCAAGAATCACTTGAACCCAGGAGGCGGCAGTTGC...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACCCTACGGCTAGTTATTaGGGATGCAGTGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: DPHDECWSRCILSLTLWDPTASY*GCSAVQ
Trigger: CTGCACTGCACTGCATCCCCAATAACTAGCCGTAGG...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 72 bp GTGGATCCAGGCTGTTGGAACTGGTGGATCCAGGGGTaGGAACGGAGGAATACTAAAAATGAGACTTGGAAC +
Preference number: 4 (lower is better)
Translates to: VDPGCWNWWIQG*ERRNTKNETWN
Trigger: GTTCCAAGTCTCATTTTTAGTATTCCTCCGTTCCAACCCCTGGATCCACCAGTTCCAACAGCCTGGATCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACGAGCTAGAAGTTGGCTaGGAGGAGGCAACACATGTT +
Preference number: 4 (lower is better)
Translates to: DPHDECWSRCILSLTLWDELEVG*EEATHV
Trigger: AACATGTGTTGCCTCCTCTCAGCCAACTTCTAGCTC...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp CTCCCACCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGATGACTTCATCAACATaGAGTTCCAGGACCCCAGAT +
Preference number: 4 (lower is better)
Translates to: LPPAHTSYLHVTSKGGMVMTSST*SSRTPD
Trigger: ATCTGGGGTCCTGGAACTTCATGTTGATGAAGTCAT...CACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGGTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp AGAATTGAGGCTTGGCTGTTCTGGCTGTATACTAACTTCATATACCCTGACAGACTGGTCTCGAACTCCTaGCCTCAGGTGATCCACGTG +
Preference number: 4 (lower is better)
Translates to: RIEAWLFWLYTNFIYPDRLVSNS*PQVIHV
Trigger: CACGTGGATCACCTGAGGTCAGGAGTTCGAGACCAG...TCTGTCAGGGTATATGAAGTTAGTATACAGCCAGAACAGCCAAGCCTCAATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGCGTGTGGGAGAGAGTTaGACCATTTGCACTGAGCCT +
Preference number: 4 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMRVGES*TICTEP
Trigger: AGGCTCAGTGCAAATGGTTCAACTCTCTCCCACACG...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp AGCCAGGCATCATGTAGCCACAGCCTGTTTAAAGGGGTAGTTTATCGCCCGCTGTTCCAGAAGATTTACTaGGTAAGCCAGGCATCATGT +
Preference number: 4 (lower is better)
Translates to: SQASCSHSLFKGVVYRPLFQKIY*VSQASC
Trigger: ACATGATGCCTGGCTTACTCAGTAAATCTTCTGGAA...CAGCGGGCGATAAACTACCCCTTTAAACAGGCTGTGGCTACATGATGCCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504064.1
CDS-3UTR GCA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAACTCTGTGGGACTGCATaGTCTTTGGGTCCATGCTGT +
Preference number: 4 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQLCGTA*SLGPCC
Trigger: ACAGCATGGACCCAAAGAGCATGCAGTCCCACAGAG...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAAGAGATGACTGTTCCCTaGTGCCTTGCAGAGATTGGC +
Preference number: 4 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQEMTVP*CLAEIG
Trigger: GCCAATCTCTGCAAGGCAGCAGGGAACAGTCATCTC...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACGCTGTGGTCTTGCATTaGGTAACAAAGCCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: DPHDECWSRCILSLTLWDAVVLH*VTKPFP
Trigger: TGGGAAGGGCTTTGTTACCCAATGCAAGACCACAGC...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp CTCCCACCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGCACATTTGTTTGATGTaGGTTATCCAGGAGCCACCT +
Preference number: 4 (lower is better)
Translates to: LPPAHTSYLHVTSKGGMVHICLM*VIQEPP
Trigger: AGGTGGCTCCTGGATAACCCACATCAAACAAATGTG...CACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGGTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACGCAGAAGCATCTGCCTaGCTGTCAATATCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: DPHDECWSRCILSLTLWDAEASA*LSISRW
Trigger: CCACCTTGATATTGACAGCCAGGCAGATGCTTCTGC...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp TTGGGAAGTAAGCCACTGTGCCTGGCTGGGACCACTTCTAATATGAGGCTTACAGTAGTCCCAGCTACTTaGGAGGCTGAGGTAATAGAA +
Preference number: 4 (lower is better)
Translates to: LGSKPLCLAGTTSNMRLTVVPAT*EAEVIE
Trigger: TTCTATTACCTCAGCCTCCCAAGTAGCTGGGACTAC...TGTAAGCCTCATATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACGACTTTTGGAGGCTGTaGTGGGAGGATTGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: DPHDECWSRCILSLTLWDDFWRL*WEDCLN
Trigger: GTTCAAGCAATCCTCCCACCACAGCCTCCAAAAGTC...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGGGACTGCATGCTCTTTaGGTCCATGCTGTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKGLHAL*VHAVSS
Trigger: ACTGGAGACAGCATGGACCCAAAGAGCATGCAGTCC...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATACCTTCTGGCCAGGGTaGCTACCTCTTCAGATACCC +
Preference number: 4 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDTFWPG*LPLQIP
Trigger: GGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGGTGTTTAGCACCTTCTaGCCAGGGTGGCTACCTCTT +
Preference number: 4 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMVFSTF*PGWLPL
Trigger: AAGAGGTAGCCACCCTGGCCAGAAGGTGCTAAACAC...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp CTCCCACCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGTCTACTTTGCTCTCTTaGGACACTTGCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: LPPAHTSYLHVTSKGGMVSTLLS*DTCSWN
Trigger: GTTCCAAGAGCAAGTGTCCCAAGAGAGCAAAGTAGA...CACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGGTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp TTGGGAAGTAAGCCACTGTGCCTGGCTGGGACCACTTCTAATATGAGGCTTACAAGAGCACATAGGCACTaGGATTCAGGGAGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: LGSKPLCLAGTTSNMRLTRAHRH*DSGRSN
Trigger: ATTTGACCTCCCTGAATCCCAGTGCCTATGTGCTCT...TGTAAGCCTCATATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp CTCCCACCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGACCCATTCAGTCCCATaGCTCATGACTCATGTAGTT +
Preference number: 4 (lower is better)
Translates to: LPPAHTSYLHVTSKGGMVTHSVP*LMTHVV
Trigger: AACTACATGAGTCATGAGCCATGGGACTGAATGGGT...CACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGGTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 72 bp ATGCATTTCTACTTTGCTCTCTTGGGACACTTGCTCTaGGAACTCAGCTGCCATGCTGTGAAGAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: MHFYFALLGHLL*ELSCHAVKKPK
Trigger: CTTGGGCTTCTTCACAGCATGGCAGCTGAGTTCCAAGAGCAAGTGTCCCAAGAGAGCAAAGTAGAAATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 72 bp ATCCCTTATCCCACTTGCTCTTCTCATAATGTGGCTTaGACACGCCTCCAAGGACAAGTGGGGTTTATGTCC +
Preference number: 4 (lower is better)
Translates to: IPYPTCSSHNVA*TRLQGQVGFMS
Trigger: GGACATAAACCCCACTTGTCCTTGGAGGCGTGTCAAAGCCACATTATGAGAAGAGCAAGTGGGATAAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATGGAGGCAACACATGTTaGTCAGAAGTGAGCACATCA +
Preference number: 4 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYGGNTC*SEVSTS
Trigger: TGATGTGCTCACTTCTGATCAACATGTGTTGCCTCC...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp ACCCTCAGAGGCAGCGATGGATGGCAGCCAGGCCTTTTCCTAGTACTTCTCAATCATATGAGCTCACCTTaGATCAGGAACTTAATTCCT +
Preference number: 4 (lower is better)
Translates to: TLRGSDGWQPGLFLVLLNHMSSP*IRNLIP
Trigger: AGGAATTAAGTTCCTGATTCAAGGTGAGCTCATATG...ATTGAGAAGTACTAGGAAAAGGCCTGGCTGCCATCCATCGCTGCCTCTGAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTTCAAGCAATTCTCCTaGCTCAGCCTCCCGAATAGC +
Preference number: 4 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMFKQFS*LSLPNS
Trigger: GCTATTCGGGAGGCTGAGGCAGGAGAATTGCTTGAA...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATGAGAGTCCCTGGACATaGCTCTCCACTGCAACCTTA +
Preference number: 4 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDESPWT*LSTATL
Trigger: TAAGGTTGCAGTGGAGAGGCATGTCCAGGGACTCTC...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATCAGCCAGAACAAACTTaGCAGCCATGTGAGTCATCT +
Preference number: 4 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYQPEQT*QPCESS
Trigger: AGATGACTCACATGGCTGGCAAGTTTGTTCTGGCTG...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATGTGAAAGTCAGTGTGTaGCCAGACACAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDVKVSV*PDTVAH
Trigger: GTGAGCCACTGTGTCTGGCCACACACTGACTTTCAC...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATGGACTCCCAAAGTGTTaGGAAGTAAGCCACTGTGCC +
Preference number: 4 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDGLPKC*EVSHCA
Trigger: GGCACAGTGGCTTACTTCCCAACACTTTGGGAGTCC...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGGCCTCCAAGGACAAGTaGGGTTTATGTCCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKASKDK*GLCPFH
Trigger: GTGGAAAGGACATAAACCCCACTTGTCCTTGGAGGC...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGCCTACTACAGACTACTaGACCAGGGGTCTATGTCCA +
Preference number: 4 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKPTTDY*TRGLCP
Trigger: TGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGG...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp AGGGGTAGTTTATCGCCCGCTGTTTTCCCTGCAGCTCTTTCAGAGAGACCTCACCATTTAATGTTTCTTTaGTGGTCACTGCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: RGSLSPAVFPAALSERPHHLMFL*WSLQQM
Trigger: CATTTGCTGCAGTGACCATCAAAGAAACATTAAATG...GTGAGGTCTCTCTGAAAGAGCTGCAGGGAAAACAGCGGGCGATAAACTACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504064.1
CDS-3UTR TCA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAATCCAAAGCTGGTTACTaGCCCAAAAGGAAACCATCG +
Preference number: 4 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQSKAGY*PKRKPS
Trigger: CGATGGTTTCCTTTTGGGTCAGTAACCAGCTTTGGA...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACGCTTTGCAGAAATGCTaGCAAGCAAGGGAATTTCAG +
Preference number: 4 (lower is better)
Translates to: DPHDECWSRCILSLTLWDALQKC*QAREFQ
Trigger: CTGAAATTCCCTTGCTTGTCAGCATTTCTGCAAAGC...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACTTTGGCATAAATATCTaGGAGTCACTGTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: DPHDECWSRCILSLTLWDFGINI*ESLWAM
Trigger: CATGGCCCACAGTGACTCTCAGATATTTATGCCAAA...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACATCCAGATATTACAGTaGAAGTCAGTGTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: DPHDECWSRCILSLTLWDIQILQ*KSVCGQ
Trigger: CTGGCCACACACTGACTTTCACTGTAATATCTGGAT...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATAGGCCAATGATAAGGTaGTATGAACTGAGGAGTACC +
Preference number: 4 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYRPMIR*YELRST
Trigger: GGTACTCCTCAGTTCATATCACCTTATCATTGGCCT...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp CTCCCACCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGGGACCACTTCTAATATaGGGCTTACAAGGTAGAATT +
Preference number: 4 (lower is better)
Translates to: LPPAHTSYLHVTSKGGMVGPLLI*GLQGRI
Trigger: AATTCTACCTTGTAAGCCTCATATTAGAAGTGGTCC...CACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGGTGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATTGGAGTACAATGGTGTaGTCTCATCTCACTGTAACC +
Preference number: 4 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYWSTMV*SHLTVT
Trigger: GGTTACAGTGAGATGAGATCACACCATTGTACTCCA...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATCACTTGAGCTCAGGCTaGATCCCAAGCAATGCTGAT +
Preference number: 4 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDHLSSG*IPSNAD
Trigger: ATCAGCATTGCTTGGGATTCAGCCTGAGCTCAAGTG...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp ATGCAGCTCTTACAAAGCTCCATCTCAAACCCCTATTCCATTTTCCCTCCAACATTCCACGCTGAGCAGTaGGCAAGAGAAAGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: MQLLQSSISNPYSIFPPTFHAEQ*ARERVS
Trigger: AGAGACTCTTTCTCTTGCTCACTGCTCAGCGTGGAA...TGTTGGAGGGAAAATGGAATAGGGGTTTGAGATGGAGCTTTGTAAGAGCTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504064.1
CDS-3UTR GCA 90 bp CTCCCACCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGTGGGTTGGAAAGAGCTaGTTCGAGCATTTTAATGAT +
Preference number: 4 (lower is better)
Translates to: LPPAHTSYLHVTSKGGMVWVGKS*FEHFND
Trigger: ATCATTAAAATGCTCGAAGCAGCTCTTTCCAACCCA...CACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGGTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp ACCCTCAGAGGCAGCGATGGATGGCAGCCAGGCCTTTTCCTAGTACTTCTCAATGAAATTATCCAAAGCTaGTTACTGACCCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: TLRGSDGWQPGLFLVLLNEIIQS*LLTQKE
Trigger: TTCCTTTTGGGTCAGTAACCAGCTTTGGATAATTTC...ATTGAGAAGTACTAGGAAAAGGCCTGGCTGCCATCCATCGCTGCCTCTGAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATCTCACTGTGTCTTCTTaGCAGGCAGAGCTTACTGAC +
Preference number: 4 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDLTVSS*QAELTD
Trigger: GTCAGTAAGCTCTGCCTGCCAAGAAGACACAGTGAG...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAAGAGGAGTCACACCATTaGGTCAAGAGTCATGAATGG +
Preference number: 4 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQEESHH*VKSHEW
Trigger: CCATTCATGACTCTTGACCCAATGGTGTGACTCCTC...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATATGAGACTTGGAACTTaGAAGGCCTACACCACGAGG +
Preference number: 4 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDMRLGT*KAYTTR
Trigger: CCTCGTGGTGTAGGCCTTCCAAGTTCCAAGTCTCAT...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATGTAAGCCACTGTGCCTaGCTGGGACCACTTCTAATA +
Preference number: 4 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDVSHCA*LGPLLI
Trigger: TATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTAC...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp AGAATTGAGGCTTGGCTGTTCTGGCTGTATACTAACTTCATATACCCTGACAGATGGGACACTTGCTCTTaGAACTCAGCTGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: RIEAWLFWLYTNFIYPDRWDTCS*NSAAML
Trigger: CAGCATGGCAGCTGAGTTCCAAGAGCAAGTGTCCCA...TCTGTCAGGGTATATGAAGTTAGTATACAGCCAGAACAGCCAAGCCTCAATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 72 bp TTTCCAATTCTAGCACTAAACACACCTGTCTCTAACTaGAGAGTCCCTGGACATGCCTCTCCACTGCAACCT +
Preference number: 4 (lower is better)
Translates to: FPILALNTPVSN*RVPGHASPLQP
Trigger: AGGTTGCAGTGGAGAGGCATGTCCAGGGACTCTCAAGTTAGAGACAGGTGTGTTTAGTGCTAGAATTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATGTCTGTAAAGCACTCTaGGATCCTTGGCTAGAAGGT +
Preference number: 4 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDVCKAL*DPWLEG
Trigger: ACCTTCTAGCCAAGGATCTCAGAGTGCTTTACAGAC...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp AGAATTGAGGCTTGGCTGTTCTGGCTGTATACTAACTTCATATACCCTGACAGATCATCTCTGATGGACTaGCAGAGACCTCCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: RIEAWLFWLYTNFIYPDRSSLMD*QRPPVV
Trigger: CACAACAGGAGGTCTCTGTCAGTCCATCAGAGATGA...TCTGTCAGGGTATATGAAGTTAGTATACAGCCAGAACAGCCAAGCCTCAATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGATAGAATGTCATCTCTaGTGGACTGACAGAGACCTC +
Preference number: 4 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMIECHL*WTDRDL
Trigger: GAGGTCTCTGTCAGTCCATCAGAGATGACATTCTAT...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATCTGTGGGCCATGAGTTaGAAAGGAACATGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDLWAMS*KGTCKR
Trigger: TCTCTTGCATGTTCCTTTTCAACTCATGGCCCACAG...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATCCCCAGATGCCTCTCTaGGAAGTTCATTATTTGATA +
Preference number: 4 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYPQMPL*EVHYLI
Trigger: TATCAAATAATGAACTTCTCAGAGAGGCATCTGGGG...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATAAATGCTGCTATATGTaGAGTTGTTCTGGACTGCCT +
Preference number: 4 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYKCCYM*SCSGLP
Trigger: AGGCAGTCCAGAACAACTTCACATATAGCAGCATTT...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTTTCTAGGGGTAGATTaGTGCCATAATGGACCAGGT +
Preference number: 4 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMFLGVD*CHNGPG
Trigger: ACCTGGTCCATTATGGCATCAATCTACCCCTAGAAA...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp TTGGGAAGTAAGCCACTGTGCCTGGCTGGGACCACTTCTAATATGAGGCTTACATCTCTTTCCTTCTTGTaGATATCATGCTGGAGTTAC +
Preference number: 4 (lower is better)
Translates to: LGSKPLCLAGTTSNMRLTSLSFL*ISCWSY
Trigger: GTAACTCCAGCATGATATTCACAAGAAGGAAAGAGA...TGTAAGCCTCATATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATCTATTTAAAAGTGGCTaGCCTACTTGGGAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDLFKSG*PTWEAH
Trigger: GTGAGCCTCCCAAGTAGGTCAGCCACTTTTAAATAG...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGTTCCTCGATATTGCATaGAGACACACCAATTTGGGC +
Preference number: 4 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKFLDIA*RHTNLG
Trigger: GCCCAAATTGGTGTGTCTTCATGCAATATCGAGGAA...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp TCATGTAGCCACAGCCTGTTTAAAGGGGTAGTTTATCGCCCGCTGTTTTCCCTGTTCTTTGATGGTCACTaGAGCAAATGTGCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: SCSHSLFKGVVYRPLFSLFFDGH*SKCAWN
Trigger: ATTCCAAGCACATTTGCTGCAGTGACCATCAAAGAA...CAGGGAAAACAGCGGGCGATAAACTACCCCTTTAAACAGGCTGTGGCTACATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504064.1
CDS-3UTR GCA 90 bp ACCCTCAGAGGCAGCGATGGATGGCAGCCAGGCCTTTTCCTAGTACTTCTCAATCTCAATTTGCTAGATTaGTTTAAAGGGGTCAGATTT +
Preference number: 4 (lower is better)
Translates to: TLRGSDGWQPGLFLVLLNLNLLD*FKGVRF
Trigger: AAATCTGACCCCTTTAAAGCAATCTAGCAAATTGAG...ATTGAGAAGTACTAGGAAAAGGCCTGGCTGCCATCCATCGCTGCCTCTGAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAAATCAGCAGAAGCATCTaGCTGGCTGTCAATATCAAG +
Preference number: 4 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQISRSI*LAVNIK
Trigger: CTTGATATTGACAGCCAGGCAGATGCTTCTGCTGAT...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGAGGCGACAGCCACCATaGCTGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMRRQPP*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATGGTGGCTGTCGCCT...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp CTCCCACCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAGGTACATGCCACTATaGCTGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: LPPAHTSYLHVTSKGGMVRYMPL*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATAGTGGCATGTACCT...CACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGGTGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATCTTCTTATCTCAGCCTaGAGCCTCTGTTACTTCTTA +
Preference number: 4 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYLLISA*SLCYFL
Trigger: TAAGAAGTAACAGAGGCTGCAGGCTGAGATAAGAAG...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp CTTACAAAGCTCCATCTCAAACCCCTATTCCATTTTCCCTCCAACAATCCTTCCCAACCAGGAGGCAAATaGAGCTCTTACAAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LTKLHLKPLFHFPSNNPSQPGGK*SSYKAP
Trigger: TGGAGCTTTGTAAGAGCTGCATTTGCCTCCTGGTTG...GGAAGGATTGTTGGAGGGAAAATGGAATAGGGGTTTGAGATGGAGCTTTGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504064.1
CDS-3UTR CCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATAGCTTACTGACCCCCTaGGATGGTGTATTCATTAAA +
Preference number: 4 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYSLLTP*DGVFIK
Trigger: TTTAATGAATACACCATCCCAGGGGGTCAGTAAGCT...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGCCACATGATGAATGCTaGTCAAGATGCATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKPHDEC*SRCILS
Trigger: GGAAAGGATGCATCTTGACCAGCATTCATCATGTGG...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATCTTGTGCTTTGGAGTTaGAAAGACATGGAACAAGGT +
Preference number: 4 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYLVLWS*KDMEQG
Trigger: ACCTTGTTCCATGTCTTTCCAACTCCAAAGCACAAG...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGAAGGCTGGAGTACAATaGTGTGATCTCATCTCACTG +
Preference number: 4 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMKAGVQ*CDLISL
Trigger: CAGTGAGATGAGATCACACCATTGTACTCCAGCCTT...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAAATATACATTCTAGGCTaGAGTATCCTGCAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQIYILG*SILQAS
Trigger: GCTGGCTTGCAGGATACTCCAGCCTAGAATGTATAT...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 72 bp TGGATGGCAGCCAGGCCTTTTCCTAGTACTTCTCAATaGCACATTCTTCCAAGTGCAAGTGATGCCATCATT +
Preference number: 4 (lower is better)
Translates to: WMAARPFPSTSQ*HILPSASDAII
Trigger: AATGATGGCATCACTTGCACTTGGAAGAATGTGCAATTGAGAAGTACTAGGAAAAGGCCTGGCTGCCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 72 bp CCTTCCAAATTGGGGCCACTTTCTCTCCACCTCCACTaGCTTGTTAGTTCAATTATGATCGTTCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PSKLGPLSLHLH*LVSSIMIVLCF
Trigger: GAAGCAGAGAACGATCATAATTGAACTAACAAGCAAGTGGAGGTGGAGAGAAAGTGGCCCCAATTTGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp TTGGGAAGTAAGCCACTGTGCCTGGCTGGGACCACTTCTAATATGAGGCTTACACATTTAATGTTTCTTTaGTGGTCACTGCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: LGSKPLCLAGTTSNMRLTHLMFL*WSLQQM
Trigger: CATTTGCTGCAGTGACCATCAAAGAAACATTAAATG...TGTAAGCCTCATATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp TTGGGAAGTAAGCCACTGTGCCTGGCTGGGACCACTTCTAATATGAGGCTTACAAGTATAAACTCTAACTaGTTTTCATCCGGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: LGSKPLCLAGTTSNMRLTSINSN*FSSGAK
Trigger: CTTTGCTCCGGATGAAAATCAGTTAGAGTTTATACT...TGTAAGCCTCATATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp CACAGCCTGTTTAAAGGGGTAGTTTATCGCCCGCTGTTTTCCCTGCAGCTCTTTAGTATAAACTCTAACTaGTTTTCATCCGGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: HSLFKGVVYRPLFSLQLFSINSN*FSSGAK
Trigger: CTTTGCTCCGGATGAAAATCAGTTAGAGTTTATACT...AAAGAGCTGCAGGGAAAACAGCGGGCGATAAACTACCCCTTTAAACAGGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504064.1
CDS-3UTR TCA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAATTGGTGTCTTTTCCATaGCATAACACTCCTCGAGAA +
Preference number: 4 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQLVSFP*HNTPRE
Trigger: TTCTCGAGGAGTGTTATGTCATGGAAAAGACACCAA...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp AGAATTGAGGCTTGGCTGTTCTGGCTGTATACTAACTTCATATACCCTGACAGATGCAGACCAAAGAAATaGAAACTGGCTGGGCATGGT +
Preference number: 4 (lower is better)
Translates to: RIEAWLFWLYTNFIYPDRCRPKK*KLAGHG
Trigger: ACCATGCCCAGCCAGTTTTCATTTCTTTGGTCTGCA...TCTGTCAGGGTATATGAAGTTAGTATACAGCCAGAACAGCCAAGCCTCAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp AGAATTGAGGCTTGGCTGTTCTGGCTGTATACTAACTTCATATACCCTGACAGAGCAGAGATTGGCCAATaGGATGTAAGCAGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: RIEAWLFWLYTNFIYPDRAEIGQ*DVSRVA
Trigger: AGCAACTCTGCTTACATCTCATTGGCCAATCTCTGC...TCTGTCAGGGTATATGAAGTTAGTATACAGCCAGAACAGCCAAGCCTCAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGACATTTCTATGTGTCTaGTCCACCTACAACCCATTC +
Preference number: 4 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKTFLCV*STYNPF
Trigger: GAATGGGTTGTAGGTGGATCAGACACATAGAAATGT...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGTTCAGGATACAGAGATaGGTAAGACTGATCCCTATC +
Preference number: 4 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKFRIQR*VRLIPI
Trigger: GATAGGGATCAGTCTTACTCATCTCTGTATCCTGAA...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp CTCCCACCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGTCTCAGCAGATACTCTaGATCACTTGTAAAACAAAA +
Preference number: 4 (lower is better)
Translates to: LPPAHTSYLHVTSKGGMVSQQIL*ITCKTK
Trigger: TTTTGTTTTACAAGTGATGCAGAGTATCTGCTGAGA...CACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGGTGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAAGATCCACATGATGAATaGTGGTCAAGATGCATCCTT +
Preference number: 4 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQDPHDE*WSRCIL
Trigger: AAGGATGCATCTTGACCAGCATTCATCATGTGGATC...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAAGTGCTCAGTCTAATCTaGTCCCATTTTAACCTCATG +
Preference number: 4 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQVLSLI*SHFNLM
Trigger: CATGAGGTTAAAATGGGAGCAGATTAGACTGAGCAC...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAAAAGACCTCTCTGGTCTaGAACTCTGCCTTTGAAATT +
Preference number: 4 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQKTSLV*NSAFEI
Trigger: AATTTCAAAGGCAGAGTTCCAGACCAGAGAGGTCTT...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp TTGGGAAGTAAGCCACTGTGCCTGGCTGGGACCACTTCTAATATGAGGCTTACATATGTGAAGTTGTTCTaGACTGCCTGTTATAGCTAT +
Preference number: 4 (lower is better)
Translates to: LGSKPLCLAGTTSNMRLTYVKLF*TACYSY
Trigger: ATAGCTATAACAGGCAGTCCAGAACAACTTCACATA...TGTAAGCCTCATATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGACCTGTCCCACGACTTaGATAATCAGAGGAAATTAT +
Preference number: 4 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKTCPTT*IIRGNY
Trigger: ATAATTTCCTCTGATTATTCAAGTCGTGGGACAGGT...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAACACAAGACACAAAATTaGGCAGCAAATGTTTGGGTA +
Preference number: 4 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQHKTQN*AANVWV
Trigger: TACCCAAACATTTGCTGCTCAATTTTGTGTCTTGTG...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATATTCAGATGTGCTGGTaGGAATATGACAGAAAATCT +
Preference number: 4 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYIQMCW*EYDRKS
Trigger: AGATTTTCTGTCATATTCTCACCAGCACATCTGAAT...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGAGTCAGATTTTGTTCTaGTTGCCCTATCCAATTAGG +
Preference number: 4 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKSQILF*LPYPIR
Trigger: CCTAATTGGATAGGGCAATCAGAACAAAATCTGACT...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAATTTATCACATTTGTTTaGTGTGGGTTATCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQFITFV*CGLSRS
Trigger: GCTCCTGGATAACCCACATCAAACAAATGTGATAAA...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACTTGCTTACTCTCCACTaGTTTGTACACTGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: DPHDECWSRCILSLTLWDLLTLH*FVHWKN
Trigger: ATTTTTCCAGTGTACAAATCAGTGGAGAGTAAGCAA...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATACTGACTGGTCTTTGTaGGCCGAAAGAATAAATCCT +
Preference number: 4 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDTDWSL*AERINP
Trigger: AGGATTTATTCTTTCGGCTCACAAAGACCAGTCAGT...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGTTCTTTGATGGTCACTaGAGCAAATGTGCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKFFDGH*SKCAWN
Trigger: ATTCCAAGCACATTTGCTGCAGTGACCATCAAAGAA...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACTGGAAAAATGTTGTTTaGTGCAGTGTAGTAGCTACA +
Preference number: 4 (lower is better)
Translates to: DPHDECWSRCILSLTLWDWKNVV*CSVVAT
Trigger: TGTAGCTACTACACTGCAGCAAACAACATTTTTCCA...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp AGAATTGAGGCTTGGCTGTTCTGGCTGTATACTAACTTCATATACCCTGACAGAGAATGCTGGTCAAGATaGATCCTTTCCCTAACTCTG +
Preference number: 4 (lower is better)
Translates to: RIEAWLFWLYTNFIYPDRECWSR*ILSLTL
Trigger: CAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTC...TCTGTCAGGGTATATGAAGTTAGTATACAGCCAGAACAGCCAAGCCTCAATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTTATTGGGGATGCAGTaGAGTGCAGTGATTAAAAAC +
Preference number: 4 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMLLGMQ*SAVIKN
Trigger: GTTTTTAATCACTGCACTGCACTGCATCCCCAATAA...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATGGCAACATGCCAGTCTaGTTGAATGTCTTTCCAATT +
Preference number: 4 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDGNMPV*LNVFPI
Trigger: AATTGGAAAGACATTCAAGCAGACTGGCATGTTGCC...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAATATGCATTTCTACTTTaGTCTCTTGGGACACTTGCT +
Preference number: 4 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQYAFLL*SLGTLA
Trigger: AGCAAGTGTCCCAAGAGAGCAAAGTAGAAATGCATA...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTATTATGATCGTTCTCTaGTTCCTTCCATATTGGATT +
Preference number: 4 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLIMIVL*FLPYWI
Trigger: AATCCAATATGGAAGGAAGCAGAGAACGATCATAAT...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGATAGCTTTCATTGTATaGAAAGACCTCTCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMIAFIV*KDLSGL
Trigger: CAGACCAGAGAGGTCTTTCCATACAATGAAAGCTAT...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTGTTATAGCTATTAAATaGAAACCCCAGAATTCATCC +
Preference number: 4 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLVIAIK*KPQNSS
Trigger: GGATGAATTCTGGGGTTTCCATTTAATAGCTATAAC...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 72 bp TTTCAAGCACAAGACACAAAATTGAGCAGCAAATGTTaGGGTAGTCCCATCTCCCTTCGGTTTATATGTGGG +
Preference number: 4 (lower is better)
Translates to: FQAQDTKLSSKC*GSPISLRFICG
Trigger: CCCACATATAAACCGAAGGGAGATGGGACTACCCAAACATTTGCTGCTCAATTTTGTGTCTTGTGCTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 72 bp TCTTGTGAATATCATGCTGGAGTTACAACCACCATTTaGGATCATGTGGCAACACAGGAAAGAAGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: SCEYHAGVTTTI*DHVATQERSPV
Trigger: TACAGGGCTTCTTTCCTGTGTTGCCACATGATCCAAAATGGTGGTTGTAACTCCAGCATGATATTCACAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATAATGAAGCAGAAAGGTaGCGAACATTTATCATGACC +
Preference number: 4 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDNEAER*RTFIMT
Trigger: GGTCATGATAAATGTTCGTCACCTTTCTGCTTCATT...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAAGTTATCTACAACTTATaGATCTGCCTTTCAGCCTTA +
Preference number: 4 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQVIYNL*ICLSAL
Trigger: TAAGGCTGAAAGGCAGATTCATAAGTTGTAGATAAC...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp AGAATTGAGGCTTGGCTGTTCTGGCTGTATACTAACTTCATATACCCTGACAGATCTTCCACCACTTTGTaGGACAGAATCCCTTATTGT +
Preference number: 4 (lower is better)
Translates to: RIEAWLFWLYTNFIYPDRSSTTL*DRIPYC
Trigger: ACAATAAGGGATTCTGTCTCACAAAGTGGTGGAAGA...TCTGTCAGGGTATATGAAGTTAGTATACAGCCAGAACAGCCAAGCCTCAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGGTACTTAAGGAAAGATaGTATGTAACTCCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKVLKER*YVTPSS
Trigger: TGAGCTAGGAGTTACATATCATCTTTCCTTAAGTAC...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTTGTTAGTTCAATTATaGTCGTTCTCTGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMLLVQL*SFSASF
Trigger: GAAGGAAGCAGAGAACGATCATAATTGAACTAACAA...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATAAGTGCTTTGTACACTaGACAATTATAGCTTTACCA +
Preference number: 4 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYKCFVH*TIIALP
Trigger: TGGTAAAGCTATAATTGTGCAGTGTACAAAGCACTT...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGAGATTTTGTTCTGATTaGCCTATCCAATTAGGGCAA +
Preference number: 4 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKRFCSD*PIQLGQ
Trigger: TTGCCCTAATTGGATAGGGCAATCAGAACAAAATCT...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACGTGATTAAAAACTTGTaGTTTGGAGTTGGAAAGACA +
Preference number: 4 (lower is better)
Translates to: DPHDECWSRCILSLTLWDVIKNL*FGVGKT
Trigger: TGTCTTTCCAACTCCAAAGCACAAGTTTTTAATCAC...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp AGAATTGAGGCTTGGCTGTTCTGGCTGTATACTAACTTCATATACCCTGACAGAGAGGCTTGGCTGTTCTaGCTGTATACTAACTTCATA +
Preference number: 4 (lower is better)
Translates to: RIEAWLFWLYTNFIYPDREAWLF*LYTNFI
Trigger: TATGAAGTTAGTATACAGCCAGAACAGCCAAGCCTC...TCTGTCAGGGTATATGAAGTTAGTATACAGCCAGAACAGCCAAGCCTCAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp AGAATTGAGGCTTGGCTGTTCTGGCTGTATACTAACTTCATATACCCTGACAGAACAAGAATTGAGGCTTaGCTGTTCTGGCTGTATACT +
Preference number: 4 (lower is better)
Translates to: RIEAWLFWLYTNFIYPDRTRIEA*LFWLYT
Trigger: AGTATACAGCCAGAACAGCCAAGCCTCAATTCTTGT...TCTGTCAGGGTATATGAAGTTAGTATACAGCCAGAACAGCCAAGCCTCAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAATCAGGATCCATTAGATaGAAAGTGAGGAAAATGCAA +
Preference number: 4 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQSGSIR*KVRKMQ
Trigger: TTGCATTTTCCTCACTTTCCATCTAATGGATCCTGA...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp AGAATTGAGGCTTGGCTGTTCTGGCTGTATACTAACTTCATATACCCTGACAGAAAAGTATGGCAGAAGTaGTGTGATGTGATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: RIEAWLFWLYTNFIYPDRKVWQK*CDVISE
Trigger: CTCAGAAATCACATCACATCACTTCTGCCATACTTT...TCTGTCAGGGTATATGAAGTTAGTATACAGCCAGAACAGCCAAGCCTCAATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR TCA 90 bp AGAATTGAGGCTTGGCTGTTCTGGCTGTATACTAACTTCATATACCCTGACAGAGAACAATACCATATTTaGGTTCTGCACTCACTGATG +
Preference number: 4 (lower is better)
Translates to: RIEAWLFWLYTNFIYPDREQYHI*VLHSLM
Trigger: CATCAGTGAGTGCAGAACTCAAATATGGTATTGTTC...TCTGTCAGGGTATATGAAGTTAGTATACAGCCAGAACAGCCAAGCCTCAATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR GCA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGATCAGAGTAATACATTaGTTACTCTCCACTGATTTG +
Preference number: 4 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMIRVIH*LLSTDL
Trigger: CAAATCAGTGGAGAGTAAGCAATGTATTACTCTGAT...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATAATAATTCAGGCAATTaGTTGTCTGGGTTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDNNSGN*LSGFCN
Trigger: ATTGCAGAACCCAGACAACCAATTGCCTGAATTATT...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CCA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGAAGGAAATAAAACTTTaGTGCCAGACAAGACAGTAT +
Preference number: 4 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKKEIKL*CQTRQY
Trigger: ATACTGTCTTGTCTGGCACCAAAGTTTTATTTCCTT...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 72 bp GTTGAGACTTTTAGGAGAAATCTTCCTGCCTGTTGTTaGTCAATAATACTGACTGGTCTTTGTGAGCCGAAA +
Preference number: 4 (lower is better)
Translates to: VETFRRNLPACC*SIILTGLCEPK
Trigger: TTTCGGCTCACAAAGACCAGTCAGTATTATTGACAAACAACAGGCAGGAAGATTTCTCCTAAAAGTCTCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 72 bp AATTATAAAAATACTATGCATTTCTACTTTGCTCTCTaGGGACACTTGCTCTTGGAACTCAGCTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: NYKNTMHFYFAL*GHLLLELSCHA
Trigger: AGCATGGCAGCTGAGTTCCAAGAGCAAGTGTCCCAAGAGAGCAAAGTAGAAATGCATAGTATTTTTATAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 72 bp TTCAGATGTGCTGGTGAGAATATGACAGAAAATCTGTaGAAGTTGTGTACCATGAAGTCTGTCTTTTGTCAA +
Preference number: 4 (lower is better)
Translates to: FRCAGENMTENL*KLCTMKSVFCQ
Trigger: TTGACAAAAGACAGACTTCATGGTACACAACTTCAACAGATTTTCTGTCATATTCTCACCAGCACATCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 72 bp GTGGAGTTTTCACATGTTCCTGGCATTATTTATAATTaGAGGTGTTTCACCGACATCAGAGTAATACATTGC +
Preference number: 4 (lower is better)
Translates to: VEFSHVPGIIYN*RCFTDIRVIHC
Trigger: GCAATGTATTACTCTGATGTCGGTGAAACACCTCAAATTATAAATAATGCCAGGAACATGTGAAAACTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
3UTR CAA 72 bp TACTCTCCACTGATTTGTACACTGGAAAAATGTTGTTaGCTGCAGTGTAGTAGCTACATATCATTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: YSPLICTLEKCC*LQCSSYISFFS
Trigger: ACTAAAGAATGATATGTAGCTACTACACTGCAGCAAACAACATTTTTCCAGTGTACAAATCAGTGGAGAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS GCA 90 bp ACGAGCGCGATCACCAGGGCGAAGACTAGGGCTGCGCGGGGAGCCTaGATGTCCGCTCGCCTCGGCAGAGGCGCGCTCAGGATGCTGCGC +
Preference number: 5 (lower is better)
Translates to: TSAITRAKTRAARGA*MSARLGRGALRMLR
Trigger: GCGCAGCATCCTGAGCGCGCCTCTGCCGAGGCGAGCGGACATGCAGGCTCCCCGCGCAGCCCTAGTCTTCGCCCTGGTGATCGCGCTCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304385.8
ENST00000504064.1
CDS-3UTR CAA 90 bp CTCCCACCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGTGCAGTGGCTCAGTCTaGGCACTCACTGCAAACCCC +
Preference number: 5 (lower is better)
Translates to: LPPAHTSYLHVTSKGGMVCSGSV*ALTANP
Trigger: GGGGTTTGCAGTGAGTGCCAAGACTGAGCCACTGCA...CACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGGTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAACGCTGGACCACAGGCTaGGCTGGGCTCCTATCCGAC +
Preference number: 5 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQRWTTG*AGLLSD
Trigger: GTCGGATAGGAGCCCAGCCAAGCCTGTGGTCCAGCG...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS TCA 90 bp GCAGCCTCAGCAGACTCCCTCAGGGGCTGCTTCTCTTGGAAAACATaGGCGCCATTCAGGTTTAGGATTCACTGTCACTTGGGTTGTGAT +
Preference number: 5 (lower is better)
Translates to: AASADSLRGCFSWKT*APFRFRIHCHLGCD
Trigger: ATCACAACCCAAGTGACAGTGAATCCTAAACCTGAATGGCGCTCATGTTTTCCAAGAGAAGCAGCCCCTGAGGGAGTCTGCTGAGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304385.8
ENST00000510252.1
CDS-3UTR CAA 90 bp CTCCCACCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGCAGGGGCTGCTTCTCTaGGAAAACATGAGCGCCATT +
Preference number: 5 (lower is better)
Translates to: LPPAHTSYLHVTSKGGMVQGLLL*ENMSAI
Trigger: AATGGCGCTCATGTTTTCCAAGAGAAGCAGCCCCTG...CACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGGTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp ACCCTCAGAGGCAGCGATGGATGGCAGCCAGGCCTTTTCCTAGTACTTCTCAATCACAAGGTACAAGAATaGAGGCTTGGCTGTTCTGGC +
Preference number: 5 (lower is better)
Translates to: TLRGSDGWQPGLFLVLLNHKVQE*RLGCSG
Trigger: GCCAGAACAGCCAAGCCTCAATTCTTGTACCTTGTG...ATTGAGAAGTACTAGGAAAAGGCCTGGCTGCCATCCATCGCTGCCTCTGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGGGTGGATCCAGGCTGTaGGAACTGGTGGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKGGSRL*ELVDPG
Trigger: CCCTGGATCCACCAGTTCCAACAGCCTGGATCCACC...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp TTGGGAAGTAAGCCACTGTGCCTGGCTGGGACCACTTCTAATATGAGGCTTACAGTAATCCCAGGACTTTaGGAGGCTGTGGTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: LGSKPLCLAGTTSNMRLTVIPGL*EAVVGG
Trigger: TCCTCCCACCACAGCCTCCAAAAGTCCTGGGATTAC...TGTAAGCCTCATATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp TTGGGAAGTAAGCCACTGTGCCTGGCTGGGACCACTTCTAATATGAGGCTTACACTGTTCCCTGCTGCCTaGCAGAGATTGGCCAATGAG +
Preference number: 5 (lower is better)
Translates to: LGSKPLCLAGTTSNMRLTLFPAA*QRLANE
Trigger: CTCATTGGCCAATCTCTGCAAGGCAGCAGGGAACAG...TGTAAGCCTCATATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp TTGGGAAGTAAGCCACTGTGCCTGGCTGGGACCACTTCTAATATGAGGCTTACATGGACTCCCAAAGTGTaGGGAAGTAAGCCACTGTGC +
Preference number: 5 (lower is better)
Translates to: LGSKPLCLAGTTSNMRLTWTPKV*GSKPLC
Trigger: GCACAGTGGCTTACTTCCCAACACTTTGGGAGTCCA...TGTAAGCCTCATATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACTTGGGAGGCTCACCCTaGTGCTGGTTCCCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: DPHDECWSRCILSLTLWDLGGSP*CWFPLF
Trigger: AAAGAGAGGGAACCAGCACAAGGGTGAGCCTCCCAA...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS GCA 90 bp GTTATTCTGTCCCTGCAGCACCCCAGTGCTCCAAAAGCTAGAATCTaGATGTCTCAGGATAGACAGTGGAATAAGATGGCTTCGCCTGAG +
Preference number: 5 (lower is better)
Translates to: VILSLQHPSAPKARI*MSQDRQWNKMASPE
Trigger: CTCAGGCGAAGCCATCTTATTCCACTGTCTATCCTGAGACATGCAGATTCTAGCTTTTGGAGCACTGGGGTGCTGCAGGGACAGAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510252.1
CDS-3UTR CAA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTAATGAGACTTGGAACTaGGAAGGCCTACACCACGAG +
Preference number: 5 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLNETWN*EGLHHE
Trigger: CTCGTGGTGTAGGCCTTCCAAGTTCCAAGTCTCATT...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp TTGGGAAGTAAGCCACTGTGCCTGGCTGGGACCACTTCTAATATGAGGCTTACAGCTGTGGTGGGAGGATaGCTTGAACCTAGAAGTTCA +
Preference number: 5 (lower is better)
Translates to: LGSKPLCLAGTTSNMRLTAVVGG*LEPRSS
Trigger: TGAACTTCTAGGTTCAAGCAATCCTCCCACCACAGC...TGTAAGCCTCATATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATGGGACTGCATGCTCTTaGGGTCCATGCTGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDGTACS*GPCCLQ
Trigger: CTGGAGACAGCATGGACCCAAAGAGCATGCAGTCCC...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACCCTTCACCTTCCAAATaGGGGCCACTTTCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: DPHDECWSRCILSLTLWDPSPSK*GPLSLH
Trigger: GTGGAGAGAAAGTGGCCCCAATTTGGAAGGTGAAGG...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS GCA 90 bp ACACTGGAAAGGACACAATTCATCACTGCTTGGTTATTCTGTCCCTaGAGCACCCCAGTGCTCCAAAAGCTAGAATCTGCATGTCTCAGG +
Preference number: 5 (lower is better)
Translates to: TLERTQFITAWLFCP*STPVLQKLESACLR
Trigger: CCTGAGACATGCAGATTCTAGCTTTTGGAGCACTGGGGTGCTGCAGGGACAGAATAACCAAGCAGTGATGAATTGTGTCCTTTCCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510252.1
CDS CCA 90 bp CCCAGTGCTCCAAAAGCTAGAATCTGCATGTCTCAGGATAGACAGTaGAATAAGATGGCTTCGCCTGAGGTTCCAACGTGTCTGCAGAAT +
Preference number: 5 (lower is better)
Translates to: PSAPKARICMSQDRQ*NKMASPEVPTCLQN
Trigger: ATTCTGCAGACACGTTGGAACCTCAGGCGAAGCCATCTTATTCCACTGTCTATCCTGAGACATGCAGATTCTAGCTTTTGGAGCACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510252.1
CDS-3UTR CAA 90 bp ACCCTCAGAGGCAGCGATGGATGGCAGCCAGGCCTTTTCCTAGTACTTCTCAATCCTAGTACTTCTCAATaGCACATTCTTCCAAGTGCA +
Preference number: 5 (lower is better)
Translates to: TLRGSDGWQPGLFLVLLNPSTSQ*HILPSA
Trigger: TGCACTTGGAAGAATGTGCAATTGAGAAGTACTAGG...ATTGAGAAGTACTAGGAAAAGGCCTGGCTGCCATCCATCGCTGCCTCTGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGACACCTGTCTCTAACTaGAGAGTCCCTGGACATGCC +
Preference number: 5 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMTPVSN*RVPGHA
Trigger: GGCATGTCCAGGGACTCTCAAGTTAGAGACAGGTGT...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS GCA 90 bp AAACTTCAACATGCCTCTGACACTGGAAAGGACACAATTCATCACTaGTTGGTTATTCTGTCCCTGCAGCACCCCAGTGCTCCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: KLQHASDTGKDTIHH*LVILSLQHPSAPKA
Trigger: AGCTTTTGGAGCACTGGGGTGCTGCAGGGACAGAATAACCAAGCAGTGATGAATTGTGTCCTTTCCAGTGTCAGAGGCATGTTGAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510252.1
CDS CCA 90 bp TTCAACATGCCTCTGACACTGGAAAGGACACAATTCATCACTGCTTaGTTATTCTGTCCCTGCAGCACCCCAGTGCTCCAAAAGCTAGAA +
Preference number: 5 (lower is better)
Translates to: FNMPLTLERTQFITA*LFCPCSTPVLQKLE
Trigger: TTCTAGCTTTTGGAGCACTGGGGTGCTGCAGGGACAGAATAACCAAGCAGTGATGAATTGTGTCCTTTCCAGTGTCAGAGGCATGTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510252.1
CDS-3UTR CAA 90 bp ACCCTCAGAGGCAGCGATGGATGGCAGCCAGGCCTTTTCCTAGTACTTCTCAATCTTTATCACATTTGTTaGATGTGGGTTATCCAGGAG +
Preference number: 5 (lower is better)
Translates to: TLRGSDGWQPGLFLVLLNLYHIC*MWVIQE
Trigger: CTCCTGGATAACCCACATCAAACAAATGTGATAAAG...ATTGAGAAGTACTAGGAAAAGGCCTGGCTGCCATCCATCGCTGCCTCTGAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTGGTGGATCCAGGGGTaGGAACGGAGGAATACTAAA +
Preference number: 5 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMWWIQG*ERRNTK
Trigger: TTTAGTATTCCTCCGTTCCAACCCCTGGATCCACCA...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp CTCCCACCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGCTGCTATATGTGAAGTaGTTCTGGACTGCCTGTTAT +
Preference number: 5 (lower is better)
Translates to: LPPAHTSYLHVTSKGGMVLLYVK*FWTACY
Trigger: ATAACAGGCAGTCCAGAACAACTTCACATATAGCAG...CACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGGTGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp CTCCCACCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGCTGGAAAAATGTTGTTaGCTGCAGTGTAGTAGCTAC +
Preference number: 5 (lower is better)
Translates to: LPPAHTSYLHVTSKGGMVLEKCC*LQCSSY
Trigger: GTAGCTACTACACTGCAGCAAACAACATTTTTCCAG...CACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGGTGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp CTCCCACCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGCTTCCTGCCTGTTGTTaGTCAATAATACTGACTGGT +
Preference number: 5 (lower is better)
Translates to: LPPAHTSYLHVTSKGGMVLPACC*SIILTG
Trigger: ACCAGTCAGTATTATTGACAAACAACAGGCAGGAAG...CACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGGTGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATTCTCATAATGTGGCTTaGACACGCCTCCAAGGACAA +
Preference number: 5 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYSHNVA*TRLQGQ
Trigger: TTGTCCTTGGAGGCGTGTCAAAGCCACATTATGAGA...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAAAGGAGGCAACACATGTaGATCAGAAGTGAGCACATC +
Preference number: 5 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQRRQHM*IRSEHI
Trigger: GATGTGCTCACTTCTGATCAACATGTGTTGCCTCCT...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp CTCCCACCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGCCACCAGATTCAGAATaGGTACTAATTCTGACAGAA +
Preference number: 5 (lower is better)
Translates to: LPPAHTSYLHVTSKGGMVPPDSE*VLILTE
Trigger: TTCTGTCAGAATTAGTACCAATTCTGAATCTGGTGG...CACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGGTGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATCAAGCAATGCTGATTTaGCTGTTCTCCACACTCCTA +
Preference number: 5 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYQAMLI*LFSTLL
Trigger: TAGGAGTGTGGAGAACAGCAAAATCAGCATTGCTTG...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS GCA 90 bp ATAGACAGTGGAATAAGATGGCTTCGCCTGAGGTTCCAACGTGTCTaGAGAATGATTTCCATCAGATTGCACGGTAGGAAAGAATTGGGT +
Preference number: 5 (lower is better)
Translates to: IDSGIRWLRLRFQRV*RMISIRLHGRKELG
Trigger: ACCCAATTCTTTCCTACCGTGCAATCTGATGGAAATCATTCTGCAGACACGTTGGAACCTCAGGCGAAGCCATCTTATTCCACTGTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510252.1
CDS CCA 90 bp CAAAAGCTAGAATCTGCATGTCTCAGGATAGACAGTGGAATAAGATaGCTTCGCCTGAGGTTCCAACGTGTCTGCAGAATGATTTCCATC +
Preference number: 5 (lower is better)
Translates to: QKLESACLRIDSGIR*LRLRFQRVCRMISI
Trigger: GATGGAAATCATTCTGCAGACACGTTGGAACCTCAGGCGAAGCCATCTTATTCCACTGTCTATCCTGAGACATGCAGATTCTAGCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510252.1
CDS-3UTR CAA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTCTGAGGATTCTCAATTaGCTAGATTGCTTTAAAGGG +
Preference number: 5 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLLRILN*LDCFKG
Trigger: CCCTTTAAAGCAATCTAGCAAATTGAGAATCCTCAG...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATTTGAGCAGCAAATGTTaGGGTAGTCCCATCTCCCTT +
Preference number: 5 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDLSSKC*GSPISL
Trigger: AAGGGAGATGGGACTACCCAAACATTTGCTGCTCAA...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTCATGAAGTCTGTCTTTaGTCAAAGTTCTATGCAGTC +
Preference number: 5 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLHEVCL*SKFYAV
Trigger: GACTGCATAGAACTTTGACAAAAGACAGACTTCATG...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTTCTGGGTTCTGCAATTaGAAATATTCCACTAGACAC +
Preference number: 5 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLSGFCN*KYSTRH
Trigger: GTGTCTAGTGGAATATTTCAAATTGCAGAACCCAGA...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATAATTCAGGCAATTGGTaGTCTGGGTTCTGCAATTTG +
Preference number: 5 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYNSGNW*SGFCNL
Trigger: CAAATTGCAGAACCCAGACAACCAATTGCCTGAATT...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTGAAGGAAATAAAACTTaGGTGCCAGACAAGACAGTA +
Preference number: 5 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLEGNKT*VPDKTV
Trigger: TACTGTCTTGTCTGGCACCAAAGTTTTATTTCCTTC...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp TTGGGAAGTAAGCCACTGTGCCTGGCTGGGACCACTTCTAATATGAGGCTTACAAAAGCAGGCCCCTTTTaGAATTGGTATTGTTTCGTT +
Preference number: 5 (lower is better)
Translates to: LGSKPLCLAGTTSNMRLTKAGPF*NWYCFV
Trigger: AACGAAACAATACCAATTCAAAAAGGGGCCTGCTTT...TGTAAGCCTCATATTAGAAGTGGTCCCAGCCAGGCACAGTGGCTTACTTCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGACTTGTGCTTTGGAGTaGGAAAGACATGGAACAAGG +
Preference number: 5 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKTCALE*ERHGTR
Trigger: CCTTGTTCCATGTCTTTCCAACTCCAAAGCACAAGT...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAATTCTACTTTGCTCTCTaGGGACACTTGCTCTTGGAA +
Preference number: 5 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQFYFAL*GHLLLE
Trigger: TTCCAAGAGCAAGTGTCCCAAGAGAGCAAAGTAGAA...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAACTATGCATTTCTACTTaGCTCTCTTGGGACACTTGC +
Preference number: 5 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQLCIST*LSWDTC
Trigger: GCAAGTGTCCCAAGAGAGCAAAGTAGAAATGCATAG...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp CTCCCACCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGTATCCACAATGTTCCTaGACACGAAACTACCTAATA +
Preference number: 5 (lower is better)
Translates to: LPPAHTSYLHVTSKGGMVYPQCS*TRNYLI
Trigger: TATTAGGTAGTTTCGTGTCAAGGAACATTGTGGATA...CACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGGTGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATTCTCTCCACCTCCACTaGCTTGTTAGTTCAATTATG +
Preference number: 5 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYSLHLH*LVSSIM
Trigger: CATAATTGAACTAACAAGCAAGTGGAGGTGGAGAGA...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp ACCTTCTGGCCAGGGTGGCTACCTCTTCAGATACCCAATATTCTTCCACCACTTATGACAGAAAATCTGTaGAAGTTGTGTACCATGAAG +
Preference number: 5 (lower is better)
Translates to: TFWPGWLPLQIPNILPPLMTENL*KLCTMK
Trigger: CTTCATGGTACACAACTTCAACAGATTTTCTGTCAT...AAGTGGTGGAAGAATATTGGGTATCTGAAGAGGTAGCCACCCTGGCCAGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATGAACTCTTTTGGTCATaGTCACATAGCAGAAATGCT +
Preference number: 5 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYELFWS*SHSRNA
Trigger: AGCATTTCTGCTATGTGACAATGACCAAAAGAGTTC...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAACCATATGAGCTCACCTaGAATCAGGAACTTAATTCC +
Preference number: 5 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQPYELT*NQELNS
Trigger: GGAATTAAGTTCCTGATTCAAGGTGAGCTCATATGG...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATAGGATTCACTGTCACTaGGGTTGTGATTTGATTCCT +
Preference number: 5 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDRIHCH*GCDLIP
Trigger: AGGAATCAAATCACAACCCAAGTGACAGTGAATCCT...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp AAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTCCAAGTACCTGTCCCACGACTaGAATAATCAGAGGAAATTA +
Preference number: 5 (lower is better)
Translates to: KTSSTTYYRLLDQGSMSKYLSHD*NNQRKL
Trigger: TAATTTCCTCTGATTATTCAAGTCGTGGGACAGGTA...CTTGGACATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAAGAAAATCTGTTGAAGTaGTGTACCATGAAGTCTGTC +
Preference number: 5 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQENLLK*CTMKSV
Trigger: GACAGACTTCATGGTACACAACTTCAACAGATTTTC...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp CCTGCACATACTTCCTACCTACATGTCACATCCAAGGGAGGTATGGTGAAACAAAGTTTCCTGAGAAGTTaGACTAGGCTATGTTGTTGT +
Preference number: 5 (lower is better)
Translates to: PAHTSYLHVTSKGGMVKQSFLRS*TRLCCC
Trigger: ACAACAACATAGCCTAGTCAAACTTCTCAGGAAACT...TTGTTTCACCATACCTCCCTTGGATGTGACATGTAGGTAGGAAGTATGTGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp CCACACTCCTATATACATTCTAGGCTGGAGTATCCTGCAAGCCAGCACGACTATTTACTCTCCACTGATTaGTACACTGGAAAAATGTTG +
Preference number: 5 (lower is better)
Translates to: PHSYIHSRLEYPASQHDYLLSTD*YTGKML
Trigger: CAACATTTTTCCAGTGTACAAATCAGTGGAGAGTAA...ATAGTCGTGCTGGCTTGCAGGATACTCCAGCCTAGAATGTATATAGGAGTGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp GATCCACATGATGAATGCTGGTCAAGATGCATCCTTTCCCTAACTCTGTGGGACTTAAAAACTTGTGCTTaGGAGTTGGAAAGACATGGA +
Preference number: 5 (lower is better)
Translates to: DPHDECWSRCILSLTLWDLKTCA*ELERHG
Trigger: TCCATGTCTTTCCAACTCCAAAGCACAAGTTTTTAA...GTCCCACAGAGTTAGGGAAAGGATGCATCTTGACCAGCATTCATCATGTGGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp GTTGGTAAAACTAGTTCTACCACCTACTACAGACTACTGGACCAGGGGTCTATGTTTCAGATTCCACAGTaGTATCTCCTGAGTTTTCTA +
Preference number: 5 (lower is better)
Translates to: VGKTSSTTYYRLLDQGSMFQIPQ*YLLSFL
Trigger: TAGAAAACTCAGGAGATACAACTGTGGAATCTGAAA...CATAGACCCCTGGTCCAGTAGTCTGTAGTAGGTGGTAGAACTAGTTTTACCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS-3UTR CAA 90 bp GGCAAATGCAGCTCTTACAAAGCTCCATCTCAAACCCCTATTCCATTTTCCCTCTTTCAGATTCCACAGTaGTATCTCCTGAGTTTTCTA +
Preference number: 5 (lower is better)
Translates to: GKCSSYKAPSQTPIPFSLFQIPQ*YLLSFL
Trigger: TAGAAAACTCAGGAGATACAACTGTGGAATCTGAAA...GAGGGAAAATGGAATAGGGGTTTGAGATGGAGCTTTGTAAGAGCTGCATTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504064.1
CDS GCA 90 bp TCTATCCACAAACCTGATACAGTTAAATACCATAGTTCTCTGATCTaGGTGGTTACTTGCACAAAAATGGCCTCACCAAGGAGTGATAGT +
Preference number: 5 (lower is better)
Translates to: SIHKPDTVKYHSSLI*VVTCTKMASPRSDS
Trigger: ACTATCACTCCTTGGTGAGGCCATTTTTGTGCAAGTAACCACGCAGATCAGAGAACTATGGTATTTAACTGTATCAGGTTTGTGGATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510252.1
CDS-3UTR CAA 90 bp TTCTGTTATTATGGAGCGTGCAGTAGCGCCAAGCACTTTTCAGGATACAGAGATGGCATTATTTATAATTaGAGGTGTTTCACCGACATC +
Preference number: 5 (lower is better)
Translates to: FCYYGACSSAKHFSGYRDGIIYN*RCFTDI
Trigger: GATGTCGGTGAAACACCTCAAATTATAAATAATGCC...ATCTCTGTATCCTGAAAAGTGCTTGGCGCTACTGCACGCTCCATAATAACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304385.8
CDS TCA 90 bp TATTTTCTATCCACAAACCTGATACAGTTAAATACCATAGTTCTCTaGTCTGCGTGGTTACTTGCACAAAAATGGCCTCACCAAGGAGTG +
Preference number: 5 (lower is better)
Translates to: YFLSTNLIQLNTIVL*SAWLLAQKWPHQGV
Trigger: CACTCCTTGGTGAGGCCATTTTTGTGCAAGTAACCACGCAGATCAGAGAACTATGGTATTTAACTGTATCAGGTTTGTGGATAGAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510252.1
CDS GCA 90 bp CCTGATACAGTTAAATACCATAGTTCTCTGATCTGCGTGGTTACTTaGACAAAAATGGCCTCACCAAGGAGTGATAGTGATGAAAAGATT +
Preference number: 5 (lower is better)
Translates to: PDTVKYHSSLICVVT*TKMASPRSDSDEKI
Trigger: AATCTTTTCATCACTATCACTCCTTGGTGAGGCCATTTTTGTGCAAGTAACCACGCAGATCAGAGAACTATGGTATTTAACTGTATCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510252.1
CDS TCA 90 bp AGACACTGCAAATTTCATACCAGGAGGTATGTCTGTAAAGCACTCTaGGATCCTTGGCTAGAAGGTTCTTGTTTAGTTCTTTTTCTTTTA +
Preference number: 5 (lower is better)
Translates to: RHCKFHTRRYVCKAL*DPWLEGSCLVLFLL
Trigger: TAAAAGAAAAAGAACTAAACAAGAACCTTCTAGCCAAGGATCTCAGAGTGCTTTACAGACATACCTCCTGGTATGAAATTTGCAGTGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504064.1
CDS GCA 72 bp ATCACCAGGGCGAAGACTAGGGCTGCGCGGGGAGCCTaGATGTCCGCTCGCCTCGGCAGAGGCGCGCTCAGG +
Preference number: 6 (lower is better)
Translates to: ITRAKTRAARGA*MSARLGRGALR
Trigger: CCTGAGCGCGCCTCTGCCGAGGCGAGCGGACATGCAGGCTCCCCGCGCAGCCCTAGTCTTCGCCCTGGTGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304385.8
ENST00000504064.1
CDS TCA 72 bp GCAGACTCCCTCAGGGGCTGCTTCTCTTGGAAAACATaGGCGCCATTCAGGTTTAGGATTCACTGTCACTTG +
Preference number: 6 (lower is better)
Translates to: ADSLRGCFSWKT*APFRFRIHCHL
Trigger: CAAGTGACAGTGAATCCTAAACCTGAATGGCGCTCATGTTTTCCAAGAGAAGCAGCCCCTGAGGGAGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304385.8
ENST00000510252.1
CDS GCA 72 bp TCCCTGCAGCACCCCAGTGCTCCAAAAGCTAGAATCTaGATGTCTCAGGATAGACAGTGGAATAAGATGGCT +
Preference number: 6 (lower is better)
Translates to: SLQHPSAPKARI*MSQDRQWNKMA
Trigger: AGCCATCTTATTCCACTGTCTATCCTGAGACATGCAGATTCTAGCTTTTGGAGCACTGGGGTGCTGCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510252.1
CDS CAA 90 bp CTTCAACATGCCTCTGACACTGGAAAGGACACAATTCATCACTGCTaGGTTATTCTGTCCCTGCAGCACCCCAGTGCTCCAAAAGCTAGA +
Preference number: 6 (lower is better)
Translates to: LQHASDTGKDTIHHC*VILSLQHPSAPKAR
Trigger: TCTAGCTTTTGGAGCACTGGGGTGCTGCAGGGACAGAATAACCAAGCAGTGATGAATTGTGTCCTTTCCAGTGTCAGAGGCATGTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510252.1
CDS GCA 72 bp AGGACACAATTCATCACTGCTTGGTTATTCTGTCCCTaGAGCACCCCAGTGCTCCAAAAGCTAGAATCTGCA +
Preference number: 6 (lower is better)
Translates to: RTQFITAWLFCP*STPVLQKLESA
Trigger: TGCAGATTCTAGCTTTTGGAGCACTGGGGTGCTGCAGGGACAGAATAACCAAGCAGTGATGAATTGTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510252.1
CDS CCA 72 bp GAATCTGCATGTCTCAGGATAGACAGTGGAATAAGATaGCTTCGCCTGAGGTTCCAACGTGTCTGCAGAATG +
Preference number: 6 (lower is better)
Translates to: ESACLRIDSGIR*LRLRFQRVCRM
Trigger: CATTCTGCAGACACGTTGGAACCTCAGGCGAAGCCATCTTATTCCACTGTCTATCCTGAGACATGCAGATTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510252.1
CDS CAA 90 bp CTTCGCCTGAGGTTCCAACGTGTCTGCAGAATGATTTCCATCAGATaGCACGGTAGGAAAGAATTGGGTAAAGTGGGAAAACAGCTGATC +
Preference number: 6 (lower is better)
Translates to: LRLRFQRVCRMISIR*HGRKELGKVGKQLI
Trigger: GATCAGCTGTTTTCCCACTTTACCCAATTCTTTCCTACCGTGCAATCTGATGGAAATCATTCTGCAGACACGTTGGAACCTCAGGCGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510252.1
CDS GCA 72 bp GGAATAAGATGGCTTCGCCTGAGGTTCCAACGTGTCTaGAGAATGATTTCCATCAGATTGCACGGTAGGAAA +
Preference number: 6 (lower is better)
Translates to: GIRWLRLRFQRV*RMISIRLHGRK
Trigger: TTTCCTACCGTGCAATCTGATGGAAATCATTCTGCAGACACGTTGGAACCTCAGGCGAAGCCATCTTATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510252.1
CDS CCA 72 bp CCAAAAGCTAGAATCTGCATGTCTCAGGATAGACAGTaGAATAAGATGGCTTCGCCTGAGGTTCCAACGTGT +
Preference number: 6 (lower is better)
Translates to: PKARICMSQDRQ*NKMASPEVPTC
Trigger: ACACGTTGGAACCTCAGGCGAAGCCATCTTATTCCACTGTCTATCCTGAGACATGCAGATTCTAGCTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510252.1
CDS CAA 72 bp AGGTTCCAACGTGTCTGCAGAATGATTTCCATCAGATaGCACGGTAGGAAAGAATTGGGTAAAGTGGGAAAA +
Preference number: 6 (lower is better)
Translates to: RFQRVCRMISIR*HGRKELGKVGK
Trigger: TTTTCCCACTTTACCCAATTCTTTCCTACCGTGCAATCTGATGGAAATCATTCTGCAGACACGTTGGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510252.1
CDS TCA 72 bp TCCACAAACCTGATACAGTTAAATACCATAGTTCTCTaGTCTGCGTGGTTACTTGCACAAAAATGGCCTCAC +
Preference number: 6 (lower is better)
Translates to: STNLIQLNTIVL*SAWLLAQKWPH
Trigger: GTGAGGCCATTTTTGTGCAAGTAACCACGCAGATCAGAGAACTATGGTATTTAACTGTATCAGGTTTGTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510252.1
CDS GCA 72 bp GTTAAATACCATAGTTCTCTGATCTGCGTGGTTACTTaGACAAAAATGGCCTCACCAAGGAGTGATAGTGAT +
Preference number: 6 (lower is better)
Translates to: VKYHSSLICVVT*TKMASPRSDSD
Trigger: ATCACTATCACTCCTTGGTGAGGCCATTTTTGTGCAAGTAACCACGCAGATCAGAGAACTATGGTATTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510252.1
CDS GCA 72 bp AAACCTGATACAGTTAAATACCATAGTTCTCTGATCTaGGTGGTTACTTGCACAAAAATGGCCTCACCAAGG +
Preference number: 6 (lower is better)
Translates to: KPDTVKYHSSLI*VVTCTKMASPR
Trigger: CCTTGGTGAGGCCATTTTTGTGCAAGTAACCACGCAGATCAGAGAACTATGGTATTTAACTGTATCAGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510252.1