RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM151B (Homo sapiens)

Ensembl gene IDs: ENSG00000178233

Ensembl transcript IDs: ENST00000438774.2, ENST00000451188.7

Found 276 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAGGAGTGCCTGCTCTCCAGGGACTCCTTCCGCTAAGCAGGCGCTaGGCAGAGCACCAAAGGGGGCTTGGGAGTGACTGCATGTGTGTG +
Preference number: 1 (lower is better)
Translates to: PGVPALQGLLPLSRR*AEHQRGLGSDCMCV
Trigger: CACACACATGCAGTCACTCCCAAGCCCCCTTTGGTGCTCTGCTCAGCGCCTGCTTAGCGGAAGGAGTCCCTGGAGAGCAGGCACTCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR CCA 90 bp CTGAGGGAGGAGGAGCCACGTTCCTCCTTCCTTGGAGCCCTGAGGTaGCCAGGCTGTCCCCACACAAAGCATGACATCCAGGTGCCAGCT +
Preference number: 1 (lower is better)
Translates to: LREEEPRSSFLGALR*PGCPHTKHDIQVPA
Trigger: AGCTGGCACCTGGATGTCATGCTTTGTGTGGGGACAGCCTGGCCACCTCAGGGCTCCAAGGAAGGAGGAACGTGGCTCCTCCTCCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR CCA 90 bp CATTGGCCCAGAGCCTCCAGAACTGTGTCCCCAAAGGGCAGGTCATaGGCTACAACCCCAGTCCAGGAGTGCCTGCTCTCCAGGGACTCC +
Preference number: 1 (lower is better)
Translates to: HWPRASRTVSPKGRS*ATTPVQECLLSRDS
Trigger: GGAGTCCCTGGAGAGCAGGCACTCCTGGACTGGGGTTGTAGCCCATGACCTGCCCTTTGGGGACACAGTTCTGGAGGCTCTGGGCCAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR TCA 90 bp GGGTCTCAGGTGGAGGAGGGAGGGAACAGGAGAGGTGGGTCTGGTTaGGCCAGTAGGAGGAATGGGGAGAGGGAGAGCTTTGAGGTGGGA +
Preference number: 1 (lower is better)
Translates to: GSQVEEGGNRRGGSG*ASRRNGERESFEVG
Trigger: TCCCACCTCAAAGCTCTCCCTCTCCCCATTCCTCCTACTGGCTCAACCAGACCCACCTCTCCTGTTCCCTCCCTCCTCCACCTGAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438774.2
3UTR CCA 90 bp CAGGTGCCCTACATGAGTCCCCCATCACTCTGTAGCTGTCCACCCTaGGGCCACACCTACAGGAATCACATCAGCCCCCAGGGCCACAAG +
Preference number: 1 (lower is better)
Translates to: QVPYMSPPSLCSCPP*GHTYRNHISPQGHK
Trigger: CTTGTGGCCCTGGGGGCTGATGTGATTCCTGTAGGTGTGGCCCCAGGGTGGACAGCTACAGAGTGATGGGGGACTCATGTAGGGCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR CCA 90 bp GAGCACAGACTCAGGGTCCAGGCAGGTTCAGTGCTAGTAGGCAGGTaGGCACTGCTGTCCAGGAAAACCTGGTGGGCAGCTGTTTCCCCT +
Preference number: 1 (lower is better)
Translates to: EHRLRVQAGSVLVGR*ALLSRKTWWAAVSP
Trigger: AGGGGAAACAGCTGCCCACCAGGTTTTCCTGGACAGCAGTGCCCACCTGCCTACTAGCACTGAACCTGCCTGGACCCTGAGTCTGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR TCA 90 bp TCCGCTAAGCAGGCGCTGAGCAGAGCACCAAAGGGGGCTTGGGAGTaGCTGCATGTGTGTGCCTGTCTAGGCAACCTAGAGTCTGTCTGT +
Preference number: 1 (lower is better)
Translates to: SAKQALSRAPKGAWE*LHVCACLGNLESVC
Trigger: ACAGACAGACTCTAGGTTGCCTAGACAGGCACACACATGCAGTCACTCCCAAGCCCCCTTTGGTGCTCTGCTCAGCGCCTGCTTAGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR GCA 90 bp CTCACCACCTGTACCTCACAGATGTCCATTCAGAGGAAAGAAGGGTaGTCCAAACGCCAGGCCCCCAAGGAGCACAGACTCAGGGTCCAG +
Preference number: 1 (lower is better)
Translates to: LTTCTSQMSIQRKEG*SKRQAPKEHRLRVQ
Trigger: CTGGACCCTGAGTCTGTGCTCCTTGGGGGCCTGGCGTTTGGAGCACCCTTCTTTCCTCTGAATGGACATCTGTGAGGTACAGGTGGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR GCA 90 bp GCTGAGCAGAGCACCAAAGGGGGCTTGGGAGTGACTGCATGTGTGTaGCTGTCTAGGCAACCTAGAGTCTGTCTGTGCCTGACACCCTCT +
Preference number: 1 (lower is better)
Translates to: AEQSTKGGLGVTACV*LSRQPRVCLCLTPS
Trigger: AGAGGGTGTCAGGCACAGACAGACTCTAGGTTGCCTAGACAGGCACACACATGCAGTCACTCCCAAGCCCCCTTTGGTGCTCTGCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR CCA 90 bp CTGGTTGAGCCAGTAGGAGGAATGGGGAGAGGGAGAGCTTTGAGGTaGGAGCACACACTGGACCTCGTCCTTCCCACTCCCCATATTGCT +
Preference number: 1 (lower is better)
Translates to: LVEPVGGMGRGRALR*EHTLDLVLPTPHIA
Trigger: AGCAATATGGGGAGTGGGAAGGACGAGGTCCAGTGTGTGCTCCCACCTCAAAGCTCTCCCTCTCCCCATTCCTCCTACTGGCTCAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438774.2
3UTR CCA 90 bp GGCCCACGGCACGGTTGTCATCTAACAGAAGATCTGTTGAAGGGCTaGACAGGAGGGAGGTGTCCCTTTAGGAACTCAGGGTTGGGGCTG +
Preference number: 1 (lower is better)
Translates to: GPRHGCHLTEDLLKG*TGGRCPFRNSGLGL
Trigger: CAGCCCCAACCCTGAGTTCCTAAAGGGACACCTCCCTCCTGTCCAGCCCTTCAACAGATCTTCTGTTAGATGACAACCGTGCCGTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR CCA 90 bp GCCTCAGACCTGCTGAATGCATTAGCTAGTTGGAATCCAGCCTGCTaGTCACCAAACCATTGCCCCCTCCATAGAGAGAGGCCCCAGGGG +
Preference number: 1 (lower is better)
Translates to: ASDLLNALASWNPAC*SPNHCPLHRERPQG
Trigger: CCCCTGGGGCCTCTCTCTATGGAGGGGGCAATGGTTTGGTGACCAGCAGGCTGGATTCCAACTAGCTAATGCATTCAGCAGGTCTGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR TCA 90 bp ACAGGAATCACATCAGCCCCCAGGGCCACAAGAGACCTAGCTGACTaGTTCAGGCTGAGCGCCATTGCCCATCCTCCTTGGGCTGATTCA +
Preference number: 1 (lower is better)
Translates to: TGITSAPRATRDLAD*FRLSAIAHPPWADS
Trigger: TGAATCAGCCCAAGGAGGATGGGCAATGGCGCTCAGCCTGAATCAGTCAGCTAGGTCTCTTGTGGCCCTGGGGGCTGATGTGATTCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR GCA 90 bp CCAGCCTCAGACCTGCTGAATGCATTAGCTAGTTGGAATCCAGCCTaGTGGTCACCAAACCATTGCCCCCTCCATAGAGAGAGGCCCCAG +
Preference number: 1 (lower is better)
Translates to: PASDLLNALASWNPA*WSPNHCPLHRERPQ
Trigger: CTGGGGCCTCTCTCTATGGAGGGGGCAATGGTTTGGTGACCAGCAGGCTGGATTCCAACTAGCTAATGCATTCAGCAGGTCTGAGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR TCA 90 bp CTGCATGTGTGTGCCTGTCTAGGCAACCTAGAGTCTGTCTGTGCCTaGCACCCTCTGACAGTTCCGGAGTGCAAACGTGTAGGTGTGAGG +
Preference number: 1 (lower is better)
Translates to: LHVCACLGNLESVCA*HPLTVPECKRVGVR
Trigger: CCTCACACCTACACGTTTGCACTCCGGAACTGTCAGAGGGTGTCAGGCACAGACAGACTCTAGGTTGCCTAGACAGGCACACACATGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR GCA 90 bp GTGACTGCATGTGTGTGCCTGTCTAGGCAACCTAGAGTCTGTCTGTaGCTGACACCCTCTGACAGTTCCGGAGTGCAAACGTGTAGGTGT +
Preference number: 1 (lower is better)
Translates to: VTACVCLSRQPRVCL*LTPSDSSGVQTCRC
Trigger: ACACCTACACGTTTGCACTCCGGAACTGTCAGAGGGTGTCAGGCACAGACAGACTCTAGGTTGCCTAGACAGGCACACACATGCAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR TCA 90 bp CTCTTTATGTACAGGGACAGCGGGGGTCTCGGCCCCATCCGGGCCTGTCTTGCGCCTCAGTCACCGTGGTaGCTCGCCCTGCGTCGCAGA +
Preference number: 2 (lower is better)
Translates to: LFMYRDSGGLGPIRACLAPQSPW*LALRRR
Trigger: TCTGCGACGCAGGGCGAGTCACCACGGTGACTGAGG...CGCAAGACAGGCCCGGATGGGGCCGAGACCCCCGCTGTCCCTGTACATAAAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR CCA 90 bp GACGAGGGGCGCACAGACACAGCGTACCGCGTGGTGGCTGACCACATCCGCACAGGTGGGAGCACACACTaGACCTCGTCCTTCCCACTC +
Preference number: 2 (lower is better)
Translates to: DEGRTDTAYRVVADHIRTGGSTH*TSSFPL
Trigger: GAGTGGGAAGGACGAGGTCCAGTGTGTGCTCCCACC...TGTGCGGATGTGGTCAGCCACCACGCGGTACGCTGTGTCTGTGCGCCCCTCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438774.2
3UTR CAA 90 bp TCGCACTCCCCGCTAGGAAGAAGGGAAGGGGAGCCAGAGGCGATGTaGCATAGGTGGAGGCCACACAGTTGGTGGTGCAGGCCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: SHSPLGRREGEPEAM*HRWRPHSWWCRPGW
Trigger: CCAGCCAGGCCTGCACCACCAACTGTGTGGCCTCCACCTATGCAACATCGCCTCTGGCTCCCCTTCCCTTCTTCCTAGCGGGGAGTGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR TCA 90 bp GTGGCAGACGAGGGGCGCACAGACACAGCGTACCGCGTGGTGGCTGACCACATCATGTCAGGTCCCCCGTaGGTCTGGAAGGGCTACAGA +
Preference number: 2 (lower is better)
Translates to: VADEGRTDTAYRVVADHIMSGPP*VWKGYR
Trigger: TCTGTAGCCCTTCCAGACTCACGGGGGACCTGACAT...GATGTGGTCAGCCACCACGCGGTACGCTGTGTCTGTGCGCCCCTCGTCTGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438774.2
3UTR-3UTR CCA 90 bp ACGGAGAGAAGGCGGTGTCAGAGCTTTAGGGGAACAGGACGTGGGGCCAGCGCCTTCCACGGTGTTGGATaGAGGCCTAGGGCTGACACC +
Preference number: 2 (lower is better)
Translates to: TERRRCQSFRGTGRGASAFHGVG*RPRADT
Trigger: GGTGTCAGCCCTAGGCCTCCATCCAACACCGTGGAA...GGCGCTGGCCCCACGTCCTGTTCCCCTAAAGCTCTGACACCGCCTTCTCTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR CAA 90 bp GGCCTCTCCCTTCAGACAAGGCCCAACGCGGGGCCCACGGCACGGTaGTCATCTAACAGAAGATCTGTTGAAGGGCTGGACAGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: GLSLQTRPNAGPTAR*SSNRRSVEGLDRRE
Trigger: CTCCCTCCTGTCCAGCCCTTCAACAGATCTTCTGTTAGATGACAACCGTGCCGTGGGCCCCGCGTTGGGCCTTGTCTGAAGGGAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR CAA 90 bp TCTTGGGGTCAGCGCCAAGAAGAGGGCAGCAACATTTCCACGGTGTaGGATGGAGGCCTAGGGCTGACACCTGGCCCCAGCCTCAGACCT +
Preference number: 2 (lower is better)
Translates to: SWGQRQEEGSNISTV*DGGLGLTPGPSLRP
Trigger: AGGTCTGAGGCTGGGGCCAGGTGTCAGCCCTAGGCCTCCATCCAACACCGTGGAAATGTTGCTGCCCTCTTCTTGGCGCTGACCCCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR TCA 90 bp TTCCCCTCTTGTGAGACCAGGCTCTGTCTCAGGAACAGGCCTGAGGGAGGAGGAGAGGCCCCAGGGGAGTaGGGCCACGAAGGAAGGAAA +
Preference number: 2 (lower is better)
Translates to: FPSCETRLCLRNRPEGGGEAPGE*GHEGRK
Trigger: TTTCCTTCCTTCGTGGCCTCACTCCCCTGGGGCCTC...TCCTCCTCCCTCAGGCCTGTTCCTGAGACAGAGCCTGGTCTCACAAGAGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR GCA 90 bp AATAGAGGTCCCCCTTCCCCTCTTGTGAGACCAGGCTCTGTCTCAGGAACAGGCCGTGGTGACTCGCCCTaGGTCGCAGAGGGAGCACAG +
Preference number: 2 (lower is better)
Translates to: NRGPPSPLVRPGSVSGTGRGDSP*VAEGAQ
Trigger: CTGTGCTCCCTCTGCGACGCAGGGCGAGTCACCACG...GCCTGTTCCTGAGACAGAGCCTGGTCTCACAAGAGGGGAAGGGGGACCTCTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR CCA 90 bp TTCCCCTCTTGTGAGACCAGGCTCTGTCTCAGGAACAGGCCTGAGGGAGGAGGACTTGGAGCCCTGAGGTaGCCAGGCTGTCCCCACACA +
Preference number: 2 (lower is better)
Translates to: FPSCETRLCLRNRPEGGGLGALR*PGCPHT
Trigger: TGTGTGGGGACAGCCTGGCCACCTCAGGGCTCCAAG...TCCTCCTCCCTCAGGCCTGTTCCTGAGACAGAGCCTGGTCTCACAAGAGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR CAA 90 bp GTGGGTCTGGTTGAGCCAGTAGGAGGAATGGGGAGAGGGAGAGCTTaGAGGTGGGAGCACACACTGGACCTCGTCCTTCCCACTCCCCAT +
Preference number: 2 (lower is better)
Translates to: VGLVEPVGGMGRGRA*RWEHTLDLVLPTPH
Trigger: ATGGGGAGTGGGAAGGACGAGGTCCAGTGTGTGCTCCCACCTCAAAGCTCTCCCTCTCCCCATTCCTCCTACTGGCTCAACCAGACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438774.2
3UTR-3UTR TCA 90 bp TTCCCCTCTTGTGAGACCAGGCTCTGTCTCAGGAACAGGCCTGAGGGAGGAGGAGTGATGTCTGTGCAGTaGGCACAGTCCCTCTGGACC +
Preference number: 2 (lower is better)
Translates to: FPSCETRLCLRNRPEGGGVMSVQ*AQSLWT
Trigger: GGTCCAGAGGGACTGTGCTCACTGCACAGACATCAC...TCCTCCTCCCTCAGGCCTGTTCCTGAGACAGAGCCTGGTCTCACAAGAGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR TCA 90 bp AATAGAGGTCCCCCTTCCCCTCTTGTGAGACCAGGCTCTGTCTCAGGAACAGGCTCCAGTTGGGGCTTGTaGCAACGTCCTCAGTCCCCC +
Preference number: 2 (lower is better)
Translates to: NRGPPSPLVRPGSVSGTGSSWGL*QRPQSP
Trigger: GGGGGACTGAGGACGTTGTCACAAGCCCCAACTGGA...GCCTGTTCCTGAGACAGAGCCTGGTCTCACAAGAGGGGAAGGGGGACCTCTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR GCA 90 bp TGGTGGCAGGATGCCCCTTTGAAGACCCTGCGACACACAGCAGGGCTTCAGCTCTCCAGAGGTCCCCGTTaGCACCCAGGTCTATGTCAT +
Preference number: 2 (lower is better)
Translates to: WWQDAPLKTLRHTAGLQLSRGPR*HPGLCH
Trigger: ATGACATAGACCTGGGTGGCAACGGGGACCTCTGGA...GAGCTGAAGCCCTGCTGTGTGTCGCAGGGTCTTCAAAGGGGCATCCTGCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR CCA 90 bp CGTACCGCGTGGTGGCTGACCACATCCGCACACTCAGTGTCTGCATCTCTGATGGGGAGAGCTTTGAGGTaGGAGCACACACTGGACCTC +
Preference number: 2 (lower is better)
Translates to: RTAWWLTTSAHSVSASLMGRALR*EHTLDL
Trigger: GAGGTCCAGTGTGTGCTCCCACCTCAAAGCTCTCCC...CATCAGAGATGCAGACACTGAGTGTGCGGATGTGGTCAGCCACCACGCGGTACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438774.2
3UTR-3UTR CCA 90 bp AATAGAGGTCCCCCTTCCCCTCTTGTGAGACCAGGCTCTGTCTCAGGAACAGGCCAGTCCCTCTGGACCTaGAGTGGGGGCCCAGTTAGA +
Preference number: 2 (lower is better)
Translates to: NRGPPSPLVRPGSVSGTGQSLWT*SGGPVR
Trigger: TCTAACTGGGCCCCCACTCCAGGTCCAGAGGGACTG...GCCTGTTCCTGAGACAGAGCCTGGTCTCACAAGAGGGGAAGGGGGACCTCTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR CAA 90 bp CCAGTTGGGGCTTGTGACAACGTCCTCAGTCCCCCAGAGATGTGTTaGAGCGACAAGCACACTCCACTCCTCCGCACAGGTTTAGGGAGG +
Preference number: 2 (lower is better)
Translates to: PVGACDNVLSPPEMC*SDKHTPLLRTGLGR
Trigger: CCTCCCTAAACCTGTGCGGAGGAGTGGAGTGTGCTTGTCGCTCAAACACATCTCTGGGGGACTGAGGACGTTGTCACAAGCCCCAACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR GCA 90 bp CCTCCTTGGGCTGATTCATTGGCCCAGAGCCTCCAGAACTGTGTCCCCAAAGGGAGCTTTAACGAGTGCTaGCCGGGTGGCATCTCACTC +
Preference number: 2 (lower is better)
Translates to: PPWADSLAQSLQNCVPKGSFNEC*PGGISL
Trigger: GAGTGAGATGCCACCCGGGCAGCACTCGTTAAAGCT...CCCTTTGGGGACACAGTTCTGGAGGCTCTGGGCCAATGAATCAGCCCAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR GCA 90 bp GATGGCTCAGGCGAAGTAAGAAGCATCAGGGGTGAGAGATGTGGGTGGCCCAAGGCCAGCTTTAACGAGTaGTGCCCGGGTGGCATCTCA +
Preference number: 2 (lower is better)
Translates to: DGSGEVRSIRGERCGWPKASFNE*CPGGIS
Trigger: TGAGATGCCACCCGGGCAGCACTCGTTAAAGCTGGC...CTTGGGCCACCCACATCTCTCACCCCTGATGCTTCTTACTTCGCCTGAGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR TCA 90 bp CCTCCTTGGGCTGATTCATTGGCCCAGAGCCTCCAGAACTGTGTCCCCAAAGGGGGAGATGAGGCTGTCTaGGACGACCTAGGCAGAAAT +
Preference number: 2 (lower is better)
Translates to: PPWADSLAQSLQNCVPKGGDEAV*DDLGRN
Trigger: ATTTCTGCCTAGGTCGTCTCAGACAGCCTCATCTCC...CCCTTTGGGGACACAGTTCTGGAGGCTCTGGGCCAATGAATCAGCCCAAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR GCA 90 bp GAGACTTTAGCCAGGGGAGTTGGCAGGGCAGGAGGGCTGTTCACAGACATGCACCCCCTTAGTCACTCGTaGTGGCCAGCTTTAACGAGT +
Preference number: 2 (lower is better)
Translates to: ETLARGVGRAGGLFTDMHPLSHS*WPALTS
Trigger: ACTCGTTAAAGCTGGCCAGCACGAGTGACTAAGGGG...GTGCATGTCTGTGAACAGCCCTCCTGCCCTGCCAACTCCCCTGGCTAAAGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR CCA 90 bp TCCGCACACTCAGTGTCTGCATCTCTGATGGCATCTTCCCTGGGATGTCAGGTCCTGACCATGAGCCGCTaGGGATTCATGTCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: SAHSVSASLMASSLGCQVLTMSR*GFMSGL
Trigger: GAGCCCAGACATGAATCCCCAGCGGCTCATGGTCAG...GACCTGACATCCCAGGGAAGATGCCATCAGAGATGCAGACACTGAGTGTGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438774.2
3UTR-3UTR CCA 90 bp TCCACTCCTCCGCACAGGTTTAGGGAGGCAAAGGCCGCCCCCACAGACACCCCATTAGATAAACAACAGTaGAGGGAGCGGCAGAAAGGA +
Preference number: 2 (lower is better)
Translates to: STPPHRFREAKAAPTDTPLDKQQ*RERQKG
Trigger: TCCTTTCTGCCGCTCCCTCCACTGTTGTTTATCTAA...TGGGGTGTCTGTGGGGGCGGCCTTTGCCTCCCTAAACCTGTGCGGAGGAGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR TCA 90 bp AATAGAGGTCCCCCTTCCCCTCTTGTGAGACCAGGCTCTGTCTCAGGAACAGGCGGTAAGGAGGAGTTCTaGTGGCTCAGGCGAAGTAAG +
Preference number: 2 (lower is better)
Translates to: NRGPPSPLVRPGSVSGTGGKEEF*WLRRSK
Trigger: CTTACTTCGCCTGAGCCATCAGAACTCCTCCTTACC...GCCTGTTCCTGAGACAGAGCCTGGTCTCACAAGAGGGGAAGGGGGACCTCTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR GCA 90 bp GGCTTTAGGGCTGAGGGCAGATGCTCTAGAGGCGATAAAGAGCACCCACCTGGGCGCACACTCAGTGTCTaGATCTCTGATGGCATCTTC +
Preference number: 2 (lower is better)
Translates to: GFRAEGRCSRGDKEHPPGRTLSV*ISDGIF
Trigger: GAAGATGCCATCAGAGATGCAGACACTGAGTGTGCG...CCCAGGTGGGTGCTCTTTATCGCCTCTAGAGCATCTGCCCTCAGCCCTAAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438774.2
3UTR-3UTR GCA 90 bp TTCCCCTCTTGTGAGACCAGGCTCTGTCTCAGGAACAGGCCTGAGGGAGGAGGAAGTTGGAATCCAGCCTaGTGGTCACCAAACCATTGC +
Preference number: 2 (lower is better)
Translates to: FPSCETRLCLRNRPEGGGSWNPA*WSPNHC
Trigger: GCAATGGTTTGGTGACCAGCAGGCTGGATTCCAACT...TCCTCCTCCCTCAGGCCTGTTCCTGAGACAGAGCCTGGTCTCACAAGAGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR GCA 90 bp CCTCCTTGGGCTGATTCATTGGCCCAGAGCCTCCAGAACTGTGTCCCCAAAGGGCCCAGGTCTATGTCATaGTCTCTCCCCTTAGTCACT +
Preference number: 2 (lower is better)
Translates to: PPWADSLAQSLQNCVPKGPRSMS*SLPLVT
Trigger: AGTGACTAAGGGGAGAGAGCATGACATAGACCTGGG...CCCTTTGGGGACACAGTTCTGGAGGCTCTGGGCCAATGAATCAGCCCAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR GCA 90 bp AGTTTAGAGAGAGGACTGAGGTACACAGTCCTCCACATTTCACTCCCCTCCCCAAATCTCCCATCCGCATaGCAGGGCCTCTCCCTTCAG +
Preference number: 2 (lower is better)
Translates to: SLERGLRYTVLHISLPSPNLPSA*QGLSLQ
Trigger: CTGAAGGGAGAGGCCCTGGCATGCGGATGGGAGATT...TGGGGAGGGGAGTGAAATGTGGAGGACTGTGTACCTCAGTCCTCTCTCTAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR CCA 90 bp GATGGCTCAGGCGAAGTAAGAAGCATCAGGGGTGAGAGATGTGGGTGGCCCAAGTTAGGAACTCAGGGTTaGGGCTGGAAGAATGACTCT +
Preference number: 2 (lower is better)
Translates to: DGSGEVRSIRGERCGWPKLGTQG*GWKNDS
Trigger: AGAGTCATTCTTCCAGCCCCAACCCTGAGTTCCTAA...CTTGGGCCACCCACATCTCTCACCCCTGATGCTTCTTACTTCGCCTGAGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR GCA 90 bp AGTTTAGAGAGAGGACTGAGGTACACAGTCCTCCACATTTCACTCCCCTCCCCATGGTCACCAAACCATTaGCCCCTCCATAGAGAGAGG +
Preference number: 2 (lower is better)
Translates to: SLERGLRYTVLHISLPSPWSPNH*PLHRER
Trigger: CCTCTCTCTATGGAGGGGGCAATGGTTTGGTGACCA...TGGGGAGGGGAGTGAAATGTGGAGGACTGTGTACCTCAGTCCTCTCTCTAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR CCA 90 bp TTTGTACAATCTTTGCGCTTAAATCCACGACAAAAAGGCCACAGTGTGATGCACCTCCCCACTGCACCCTaGCAACAGCTCTGCAGGACT +
Preference number: 2 (lower is better)
Translates to: FVQSLRLNPRQKGHSVMHLPTAP*QQLCRT
Trigger: AGTCCTGCAGAGCTGTTGCCAGGGTGCAGTGGGGAG...GTGCATCACACTGTGGCCTTTTTGTCGTGGATTTAAGCGCAAAGATTGTACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR CAA 90 bp AAGGGTTGGGCAAGATTTAGAGAATGCTTGCCTCTGACCCTGCCATaGGAATTATTTCTCCAGTTGGGGCTTGTGACAACGTCCTCAGTC +
Preference number: 2 (lower is better)
Translates to: KGWARFRECLPLTLP*ELFLQLGLVTTSSV
Trigger: GACTGAGGACGTTGTCACAAGCCCCAACTGGAGAAATAATTCCAATGGCAGGGTCAGAGGCAAGCATTCTCTAAATCTTGCCCAACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR CCA 90 bp CCTCCTTGGGCTGATTCATTGGCCCAGAGCCTCCAGAACTGTGTCCCCAAAGGGAATAGACCAAAGAATTaGTTTCTCTCTAAGTCTGTG +
Preference number: 2 (lower is better)
Translates to: PPWADSLAQSLQNCVPKGNRPKN*FLSKSV
Trigger: CACAGACTTAGAGAGAAACCAATTCTTTGGTCTATT...CCCTTTGGGGACACAGTTCTGGAGGCTCTGGGCCAATGAATCAGCCCAAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR GCA 90 bp TTTGTACAATCTTTGCGCTTAAATCCACGACAAAAAGGCCACAGTGTGATGCACAGCCAGAGGCGATGTTaGATAGGTGGAGGCCACACA +
Preference number: 2 (lower is better)
Translates to: FVQSLRLNPRQKGHSVMHSQRRC*IGGGHT
Trigger: TGTGTGGCCTCCACCTATGCAACATCGCCTCTGGCT...GTGCATCACACTGTGGCCTTTTTGTCGTGGATTTAAGCGCAAAGATTGTACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR CCA 90 bp TTTGTACAATCTTTGCGCTTAAATCCACGACAAAAAGGCCACAGTGTGATGCACAGGAAACCCCAATCTTaGGGTCAGCGCCAAGAAGAG +
Preference number: 2 (lower is better)
Translates to: FVQSLRLNPRQKGHSVMHRKPQS*GQRQEE
Trigger: CTCTTCTTGGCGCTGACCCCAAGATTGGGGTTTCCT...GTGCATCACACTGTGGCCTTTTTGTCGTGGATTTAAGCGCAAAGATTGTACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR CCA 90 bp TTTGTACAATCTTTGCGCTTAAATCCACGACAAAAAGGCCACAGTGTGATGCACCTTAGTCACTCGTGCTaGCCAGCTTTAACGAGTGCT +
Preference number: 2 (lower is better)
Translates to: FVQSLRLNPRQKGHSVMHLSHSC*PALTSA
Trigger: AGCACTCGTTAAAGCTGGCCAGCACGAGTGACTAAG...GTGCATCACACTGTGGCCTTTTTGTCGTGGATTTAAGCGCAAAGATTGTACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR CCA 90 bp TTTGTACAATCTTTGCGCTTAAATCCACGACAAAAAGGCCACAGTGTGATGCACAAGTCTGTGCATGTGTaGGAGATGAGGCTGTCTGAG +
Preference number: 2 (lower is better)
Translates to: FVQSLRLNPRQKGHSVMHKSVHV*EMRLSE
Trigger: CTCAGACAGCCTCATCTCCCACACATGCACAGACTT...GTGCATCACACTGTGGCCTTTTTGTCGTGGATTTAAGCGCAAAGATTGTACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR GCA 72 bp CCCCCGCGCGGCCTCAGTCACCGTGGTGACTCGCCCTaGGTCGCAGAGGGAGCACAGTCCGGCGAGGGGCAG +
Preference number: 3 (lower is better)
Translates to: PPRGLSHRGDSP*VAEGAQSGEGQ
Trigger: CTGCCCCTCGCCGGACTGTGCTCCCTCTGCGACGCAGGGCGAGTCACCACGGTGACTGAGGCCGCGCGGGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR CCA 72 bp TGGCAGACGAGGGGCGCACAGACACAGCGTACCGCGTaGTGGCTGACCACATCCGCACACTCAGTGTCTGCA +
Preference number: 3 (lower is better)
Translates to: WQTRGAQTQRTA*WLTTSAHSVSA
Trigger: TGCAGACACTGAGTGTGCGGATGTGGTCAGCCACCACGCGGTACGCTGTGTCTGTGCGCCCCTCGTCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438774.2
3UTR-3UTR CAA 90 bp ACGGAGAGAAGGCGGTGTCAGAGCTTTAGGGGAACAGGACGTGGGGCCAGCGCCTGGCAGGATGCCCCTTaGAAGACCCTGCGACACACA +
Preference number: 3 (lower is better)
Translates to: TERRRCQSFRGTGRGASAWQDAP*KTLRHT
Trigger: TGTGTGTCGCAGGGTCTTCAAAGGGGCATCCTGCCA...GGCGCTGGCCCCACGTCCTGTTCCCCTAAAGCTCTGACACCGCCTTCTCTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR CCA 72 bp CAGACGAGGGGCGCACAGACACAGCGTACCGCGTGGTaGCTGACCACATCCGCACACTCAGTGTCTGCATCT +
Preference number: 3 (lower is better)
Translates to: QTRGAQTQRTAW*LTTSAHSVSAS
Trigger: AGATGCAGACACTGAGTGTGCGGATGTGGTCAGCCACCACGCGGTACGCTGTGTCTGTGCGCCCCTCGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438774.2
3UTR-3UTR CAA 90 bp ACGGAGAGAAGGCGGTGTCAGAGCTTTAGGGGAACAGGACGTGGGGCCAGCGCCAACATTTCCACGGTGTaGGATGGAGGCCTAGGGCTG +
Preference number: 3 (lower is better)
Translates to: TERRRCQSFRGTGRGASANISTV*DGGLGL
Trigger: CAGCCCTAGGCCTCCATCCAACACCGTGGAAATGTT...GGCGCTGGCCCCACGTCCTGTTCCCCTAAAGCTCTGACACCGCCTTCTCTCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR TCA 72 bp TCTGATGGCATCTTCCCTGGGATGTCAGGTCCCCCGTaGGTCTGGAAGGGCTACAGAGAGGACAGGGGCTGC +
Preference number: 3 (lower is better)
Translates to: SDGIFPGMSGPP*VWKGYREDRGC
Trigger: GCAGCCCCTGTCCTCTCTGTAGCCCTTCCAGACTCACGGGGGACCTGACATCCCAGGGAAGATGCCATCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438774.2
3UTR CCA 72 bp CTCAGGGTCCAGGCAGGTTCAGTGCTAGTAGGCAGGTaGGCACTGCTGTCCAGGAAAACCTGGTGGGCAGCT +
Preference number: 3 (lower is better)
Translates to: LRVQAGSVLVGR*ALLSRKTWWAA
Trigger: AGCTGCCCACCAGGTTTTCCTGGACAGCAGTGCCCACCTGCCTACTAGCACTGAACCTGCCTGGACCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR TCA 72 bp CAGGCGCTGAGCAGAGCACCAAAGGGGGCTTGGGAGTaGCTGCATGTGTGTGCCTGTCTAGGCAACCTAGAG +
Preference number: 3 (lower is better)
Translates to: QALSRAPKGAWE*LHVCACLGNLE
Trigger: CTCTAGGTTGCCTAGACAGGCACACACATGCAGTCACTCCCAAGCCCCCTTTGGTGCTCTGCTCAGCGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR CAA 90 bp TTCCCCTCTTGTGAGACCAGGCTCTGTCTCAGGAACAGGCCTGAGGGAGGAGGATTCCAGAGGTCCCCGTaGCCACCCAGGTCTATGTCA +
Preference number: 3 (lower is better)
Translates to: FPSCETRLCLRNRPEGGGFQRSP*PPRSMS
Trigger: TGACATAGACCTGGGTGGCAACGGGGACCTCTGGAA...TCCTCCTCCCTCAGGCCTGTTCCTGAGACAGAGCCTGGTCTCACAAGAGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR CAA 90 bp TGTTGGGAGGCTGAGGAGTTTAGAGAGAGGACTGAGGTACACAGTCCTCCACATCCATCCGGGCCTGTCTaGCGGCCCTCACCTCCCTTT +
Preference number: 3 (lower is better)
Translates to: CWEAEEFRERTEVHSPPHPSGPV*RPSPPF
Trigger: AAAGGGAGGTGAGGGCCGCAAGACAGGCCCGGATGG...ATGTGGAGGACTGTGTACCTCAGTCCTCTCTCTAAACTCCTCAGCCTCCCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR GCA 72 bp CGCGTGGTGGCTGACCACATCCGCACACTCAGTGTCTaGATCTCTGATGGCATCTTCCCTGGGATGTCAGGT +
Preference number: 3 (lower is better)
Translates to: RVVADHIRTLSV*ISDGIFPGMSG
Trigger: ACCTGACATCCCAGGGAAGATGCCATCAGAGATGCAGACACTGAGTGTGCGGATGTGGTCAGCCACCACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438774.2
3UTR GCA 72 bp TTCCAGAGGTCCCCGTTGCCACCCAGGTCTATGTCATaGTCTCTCCCCTTAGTCACTCGTGCTGGCCAGCTT +
Preference number: 3 (lower is better)
Translates to: FQRSPLPPRSMS*SLPLVTRAGQL
Trigger: AAGCTGGCCAGCACGAGTGACTAAGGGGAGAGAGCATGACATAGACCTGGGTGGCAACGGGGACCTCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR CCA 72 bp TACATGAGTCCCCCATCACTCTGTAGCTGTCCACCCTaGGGCCACACCTACAGGAATCACATCAGCCCCCAG +
Preference number: 3 (lower is better)
Translates to: YMSPPSLCSCPP*GHTYRNHISPQ
Trigger: CTGGGGGCTGATGTGATTCCTGTAGGTGTGGCCCCAGGGTGGACAGCTACAGAGTGATGGGGGACTCATGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR CAA 90 bp GGTCCAGGCAGGTTCAGTGCTAGTAGGCAGGTGGGCACTGCTGTCCAGGAAAACCTAACAGAAGATCTGTaGAAGGGCTGGACAGGAGGG +
Preference number: 3 (lower is better)
Translates to: GPGRFSASRQVGTAVQENLTEDL*KGWTGG
Trigger: CCCTCCTGTCCAGCCCTTCAACAGATCTTCTGTTAG...GTTTTCCTGGACAGCAGTGCCCACCTGCCTACTAGCACTGAACCTGCCTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR CAA 90 bp GATGGCTCAGGCGAAGTAAGAAGCATCAGGGGTGAGAGATGTGGGTGGCCCAAGCCCCCAGAGATGTGTTaGAGCGACAAGCACACTCCA +
Preference number: 3 (lower is better)
Translates to: DGSGEVRSIRGERCGWPKPPEMC*SDKHTP
Trigger: TGGAGTGTGCTTGTCGCTCAAACACATCTCTGGGGG...CTTGGGCCACCCACATCTCTCACCCCTGATGCTTCTTACTTCGCCTGAGCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR CCA 72 bp GCCCCAGCCTCAGACCTGCTGAATGCATTAGCTAGTTaGAATCCAGCCTGCTGGTCACCAAACCATTGCCCC +
Preference number: 3 (lower is better)
Translates to: APASDLLNALAS*NPACWSPNHCP
Trigger: GGGGCAATGGTTTGGTGACCAGCAGGCTGGATTCCAACTAGCTAATGCATTCAGCAGGTCTGAGGCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR CCA 72 bp GTCTATGTCATGCTCTCTCCCCTTAGTCACTCGTGCTaGCCAGCTTTAACGAGTGCTGCCCGGGTGGCATCT +
Preference number: 3 (lower is better)
Translates to: VYVMLSPLSHSC*PALTSAARVAS
Trigger: AGATGCCACCCGGGCAGCACTCGTTAAAGCTGGCCAGCACGAGTGACTAAGGGGAGAGAGCATGACATAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR GCA 72 bp ATTCTGGATGTGGTTGGCTTTAGGGCTGAGGGCAGATaGTCTAGAGGCGATAAAGAGCACCCACCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: ILDVVGFRAEGR*SRGDKEHPPGP
Trigger: TGGCCCAGGTGGGTGCTCTTTATCGCCTCTAGAGCATCTGCCCTCAGCCCTAAAGCCAACCACATCCAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438774.2
3UTR GCA 72 bp TGTACCTCACAGATGTCCATTCAGAGGAAAGAAGGGTaGTCCAAACGCCAGGCCCCCAAGGAGCACAGACTC +
Preference number: 3 (lower is better)
Translates to: CTSQMSIQRKEG*SKRQAPKEHRL
Trigger: GAGTCTGTGCTCCTTGGGGGCCTGGCGTTTGGAGCACCCTTCTTTCCTCTGAATGGACATCTGTGAGGTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR GCA 72 bp TGTGTGTGCCTGTCTAGGCAACCTAGAGTCTGTCTGTaGCTGACACCCTCTGACAGTTCCGGAGTGCAAACG +
Preference number: 3 (lower is better)
Translates to: CVCLSRQPRVCL*LTPSDSSGVQT
Trigger: CGTTTGCACTCCGGAACTGTCAGAGGGTGTCAGGCACAGACAGACTCTAGGTTGCCTAGACAGGCACACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR CAA 90 bp AGGCCACGAAGGAAGGAAAGCCCCAAGTTCCCTTCTCCACAGCCTCTAAATCTCGGGCCCACGGCACGGTaGTCATCTAACAGAAGATCT +
Preference number: 3 (lower is better)
Translates to: RPRRKESPKFPSPQPLNLGPTAR*SSNRRS
Trigger: AGATCTTCTGTTAGATGACAACCGTGCCGTGGGCCC...GAGATTTAGAGGCTGTGGAGAAGGGAACTTGGGGCTTTCCTTCCTTCGTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR CAA 90 bp GGTCCAGGCAGGTTCAGTGCTAGTAGGCAGGTGGGCACTGCTGTCCAGGAAAACCCTCTGACCCTGCCATaGGAATTATTTCTCCAGTTG +
Preference number: 3 (lower is better)
Translates to: GPGRFSASRQVGTAVQENPLTLP*ELFLQL
Trigger: CAACTGGAGAAATAATTCCAATGGCAGGGTCAGAGG...GTTTTCCTGGACAGCAGTGCCCACCTGCCTACTAGCACTGAACCTGCCTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR GCA 72 bp GACCTGCTGAATGCATTAGCTAGTTGGAATCCAGCCTaGTGGTCACCAAACCATTGCCCCCTCCATAGAGAG +
Preference number: 3 (lower is better)
Translates to: DLLNALASWNPA*WSPNHCPLHRE
Trigger: CTCTCTATGGAGGGGGCAATGGTTTGGTGACCAGCAGGCTGGATTCCAACTAGCTAATGCATTCAGCAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR CCA 72 bp CTGCTGAATGCATTAGCTAGTTGGAATCCAGCCTGCTaGTCACCAAACCATTGCCCCCTCCATAGAGAGAGG +
Preference number: 3 (lower is better)
Translates to: LLNALASWNPAC*SPNHCPLHRER
Trigger: CCTCTCTCTATGGAGGGGGCAATGGTTTGGTGACCAGCAGGCTGGATTCCAACTAGCTAATGCATTCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR CAA 90 bp TTTGTACAATCTTTGCGCTTAAATCCACGACAAAAAGGCCACAGTGTGATGCACCCACCCCACAAGCCCTaGTCCCCAGGACACATGGAG +
Preference number: 3 (lower is better)
Translates to: FVQSLRLNPRQKGHSVMHPPHKP*SPGHME
Trigger: CTCCATGTGTCCTGGGGACAAGGGCTTGTGGGGTGG...GTGCATCACACTGTGGCCTTTTTGTCGTGGATTTAAGCGCAAAGATTGTACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR TCA 72 bp CCCTGCCATTGGAATTATTTCTCCAGTTGGGGCTTGTaGCAACGTCCTCAGTCCCCCAGAGATGTGTTTGAG +
Preference number: 3 (lower is better)
Translates to: PCHWNYFSSWGL*QRPQSPRDVFE
Trigger: CTCAAACACATCTCTGGGGGACTGAGGACGTTGTCACAAGCCCCAACTGGAGAAATAATTCCAATGGCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR-3UTR CAA 90 bp TTTGTACAATCTTTGCGCTTAAATCCACGACAAAAAGGCCACAGTGTGATGCACGAGCCAGAGGCGATGTaGCATAGGTGGAGGCCACAC +
Preference number: 3 (lower is better)
Translates to: FVQSLRLNPRQKGHSVMHEPEAM*HRWRPH
Trigger: GTGTGGCCTCCACCTATGCAACATCGCCTCTGGCTC...GTGCATCACACTGTGGCCTTTTTGTCGTGGATTTAAGCGCAAAGATTGTACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR TCA 72 bp GGAAGGGTTGGGCAAGATTTAGAGAATGCTTGCCTCTaGCCCTGCCATTGGAATTATTTCTCCAGTTGGGGC +
Preference number: 3 (lower is better)
Translates to: GRVGQDLENACL*PCHWNYFSSWG
Trigger: GCCCCAACTGGAGAAATAATTCCAATGGCAGGGTCAGAGGCAAGCATTCTCTAAATCTTGCCCAACCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp CCCTGCGTCGCAGAGGGAGCACAGTCCGGCGAGGGGCAGGCGGGAGGACGGCGCATCCTGCGCGGGCCCTaGGGAGAGGACGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PCVAEGAQSGEGQAGGRRILRGP*GEDGRG
Trigger: CCCCCTCCCGTCCTCTCCCCAGGGCCCGCGCAGGAT...GCGCCGTCCTCCCGCCTGCCCCTCGCCGGACTGTGCTCCCTCTGCGACGCAGGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp CCCTGCGTCGCAGAGGGAGCACAGTCCGGCGAGGGGCAGGCGGGAGGACGGCGCCCCAGACACCCCTCCTaGCGGTGGACGATGAGGACC +
Preference number: 4 (lower is better)
Translates to: PCVAEGAQSGEGQAGGRRPRHPS*RWTMRT
Trigger: GGTCCTCATCGTCCACCGGCAGGAGGGGTGTCTGGG...GCGCCGTCCTCCCGCCTGCCCCTCGCCGGACTGTGCTCCCTCTGCGACGCAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp CCAGGGCTGCAGGGCACCCCCTTACTTGGGCCGAGTAGGGGTGGCAGACGAGGGGGCGCGTCACTGTGGTaGCGTGGCACCAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: PGLQGTPLLGPSRGGRRGGASLW*RGTRPL
Trigger: CAGTGGCCTGGTGCCACGTCACCACAGTGACGCGCC...CCCTCGTCTGCCACCCCTACTCGGCCCAAGTAAGGGGGTGCCCTGCAGCCCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR TCA 90 bp ACGGAGAGAAGGCGGTGTCAGAGCTTTAGGGGAACAGGACGTGGGGCCAGCGCCGGGCGGGTGTCACCTTaGGGCCCTCGCGGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: TERRRCQSFRGTGRGASAGRVSP*GPRGAA
Trigger: AGCGGCGCCGCGAGGGCCTCAAGGTGACACCCGCCC...GGCGCTGGCCCCACGTCCTGTTCCCCTAAAGCTCTGACACCGCCTTCTCTCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp CCCTGCGTCGCAGAGGGAGCACAGTCCGGCGAGGGGCAGGCGGGAGGACGGCGCACATCAACACGGTGCTaGAGCTCATGGCGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PCVAEGAQSGEGQAGGRRTSTRC*SSWRAW
Trigger: CCAAGCCCGCCATGAGCTGCAGCACCGTGTTGATGT...GCGCCGTCCTCCCGCCTGCCCCTCGCCGGACTGTGCTCCCTCTGCGACGCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp CCAGGGCTGCAGGGCACCCCCTTACTTGGGCCGAGTAGGGGTGGCAGACGAGGGGTCACTGTGGTGACGTaGCACCAGGCCACTGCCCCC +
Preference number: 4 (lower is better)
Translates to: PGLQGTPLLGPSRGGRRGVTVVT*HQATAP
Trigger: GGGGGCAGTGGCCTGGTGCCACGTCACCACAGTGAC...CCCTCGTCTGCCACCCCTACTCGGCCCAAGTAAGGGGGTGCCCTGCAGCCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR GCA 90 bp TCCACTCCTCCGCACAGGTTTAGGGAGGCAAAGGCCGCCCCCACAGACACCCCAGGCAGTGCTCGCAGCTaGGCCGGTAGGGAGCCACGC +
Preference number: 4 (lower is better)
Translates to: STPPHRFREAKAAPTDTPGSARS*AGREPR
Trigger: GCGTGGCTCCCTACCGGCGCAGCTGCGAGCACTGCC...TGGGGTGTCTGTGGGGGCGGCCTTTGCCTCCCTAAACCTGTGCGGAGGAGTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp GTGGCAGACGAGGGGCGCACAGACACAGCGTACCGCGTGGTGGCTGACCACATCCATTGCGGTATCTGGTaGCCTGGCGGGTGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: VADEGRTDTAYRVVADHIHCGIW*PGGCGG
Trigger: TCCGCCGCACCCGCCAGGTCACCAGATACCGCAATG...GATGTGGTCAGCCACCACGCGGTACGCTGTGTCTGTGCGCCCCTCGTCTGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR TCA 90 bp ACGGAGAGAAGGCGGTGTCAGAGCTTTAGGGGAACAGGACGTGGGGCCAGCGCCGCCCCGCCAGGTCCATaGGCACCGCCTCAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: TERRRCQSFRGTGRGASAAPPGP*APPQSS
Trigger: GCTACTCTGAGGCGGTGCTCATGGACCTGGCGGGGC...GGCGCTGGCCCCACGTCCTGTTCCCCTAAAGCTCTGACACCGCCTTCTCTCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp TGGTGGCAGGATGCCCCTTTGAAGACCCTGCGACACACAGCAGGGCTTCAGCTCGGCAGCTGGCCTCGTTaGCGCTCCCGCTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: WWQDAPLKTLRHTAGLQLGSWPR*RSRCGC
Trigger: GCAGCCGCAGCGGGAGCGTCAACGAGGCCAGCTGCC...GAGCTGAAGCCCTGCTGTGTGTCGCAGGGTCTTCAAAGGGGCATCCTGCCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp CTCTTTATGTACAGGGACAGCGGGGGTCTCGGCCCCATCCGGGCCTGTCTTGCGCCTCGTCGTCCCCCATaGTGGCCTGGCTGGACAGCC +
Preference number: 4 (lower is better)
Translates to: LFMYRDSGGLGPIRACLAPRRPP*WPGWTA
Trigger: GGCTGTCCAGCCAGGCCAGCATGGGGGACGACGAGG...CGCAAGACAGGCCCGGATGGGGCCGAGACCCCCGCTGTCCCTGTACATAAAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp TCCACTCCTCCGCACAGGTTTAGGGAGGCAAAGGCCGCCCCCACAGACACCCCACATTGCGGTATCTGGTaGCCTGGCGGGTGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: STPPHRFREAKAAPTDTPHCGIW*PGGCGG
Trigger: TCCGCCGCACCCGCCAGGTCACCAGATACCGCAATG...TGGGGTGTCTGTGGGGGCGGCCTTTGCCTCCCTAAACCTGTGCGGAGGAGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp GGGAGCAGCCGACCCCCTCCCACCCATCGGTCTCTTTATGTACAGGGACAGCGGTGCTGTCTACTGTGTTaGCCCGCGGCAGGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: GSSRPPPTHRSLYVQGQRCCLLC*PAAGGG
Trigger: CCCACCGCCTGCCGCGGGTCAACACAGTAGACAGCA...CCGCTGTCCCTGTACATAAAGAGACCGATGGGTGGGAGGGGGTCGGCTGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp TCCACTCCTCCGCACAGGTTTAGGGAGGCAAAGGCCGCCCCCACAGACACCCCAGTCACTGTGGTGACGTaGCACCAGGCCACTGCCCCC +
Preference number: 4 (lower is better)
Translates to: STPPHRFREAKAAPTDTPVTVVT*HQATAP
Trigger: GGGGGCAGTGGCCTGGTGCCACGTCACCACAGTGAC...TGGGGTGTCTGTGGGGGCGGCCTTTGCCTCCCTAAACCTGTGCGGAGGAGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp CAGGGCTGCAGGGCACCCCCTTACTTGGGCCGAGTAGGGGTGGCAGACGAGGGGCTGACCATGAGCCGCTaGGGATTCATGTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: QGCRAPPYLGRVGVADEGLTMSR*GFMSGL
Trigger: GAGCCCAGACATGAATCCCCAGCGGCTCATGGTCAG...CCCCTCGTCTGCCACCCCTACTCGGCCCAAGTAAGGGGGTGCCCTGCAGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR TCA 90 bp ACGGAGAGAAGGCGGTGTCAGAGCTTTAGGGGAACAGGACGTGGGGCCAGCGCCCCGCCACGTGCGTGTTaGCGCGTTCGTGGTAGACCT +
Preference number: 4 (lower is better)
Translates to: TERRRCQSFRGTGRGASAPPRAC*RVRGRP
Trigger: AGGTCTACCACGAACGCGTCAACACGCACGTGGCGG...GGCGCTGGCCCCACGTCCTGTTCCCCTAAAGCTCTGACACCGCCTTCTCTCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp CTCTTTATGTACAGGGACAGCGGGGGTCTCGGCCCCATCCGGGCCTGTCTTGCGTCAGCCTCCGCCACGTaGGTGTTGACGCGTTCGTGG +
Preference number: 4 (lower is better)
Translates to: LFMYRDSGGLGPIRACLASASAT*VLTRSW
Trigger: CCACGAACGCGTCAACACGCACGTGGCGGAGGCTGA...CGCAAGACAGGCCCGGATGGGGCCGAGACCCCCGCTGTCCCTGTACATAAAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp GGCCCCTGTTGGGAGGCTGAGGAGTTTAGAGAGAGGACTGAGGTACACAGTCCTCAGGAGCCGTGGCGGTaGAGCGGCCGGTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GPCWEAEEFRERTEVHSPQEPWR*SGRWLW
Trigger: CCACAGCCACCGGCCGCTGCACCGCCACGGCTCCTG...AGGACTGTGTACCTCAGTCCTCTCTCTAAACTCCTCAGCCTCCCAACAGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp CAGGGCTGCAGGGCACCCCCTTACTTGGGCCGAGTAGGGGTGGCAGACGAGGGGTTGGTGAAAGAGGGCTaGATGGGACGCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QGCRAPPYLGRVGVADEGLVKEG*MGRCSS
Trigger: AGAGGAGCAGCGTCCCATCCAGCCCTCTTTCACCAA...CCCCTCGTCTGCCACCCCTACTCGGCCCAAGTAAGGGGGTGCCCTGCAGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR CCA 90 bp TCCACTCCTCCGCACAGGTTTAGGGAGGCAAAGGCCGCCCCCACAGACACCCCAAAGAAGCGCGCGCGCTaGCACAGGTACGCGTTCTCG +
Preference number: 4 (lower is better)
Translates to: STPPHRFREAKAAPTDTPKKRAR*HRYAFS
Trigger: CGAGAACGCGTACCTGTGCCAGCGCGCGCGCTTCTT...TGGGGTGTCTGTGGGGGCGGCCTTTGCCTCCCTAAACCTGTGCGGAGGAGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp ACGGAGAGAAGGCGGTGTCAGAGCTTTAGGGGAACAGGACGTGGGGCCAGCGCCCACCCCTCCTGCCGGTaGACGATGAGGACCGGAAAG +
Preference number: 4 (lower is better)
Translates to: TERRRCQSFRGTGRGASAHPSCR*TMRTGK
Trigger: CTTTCCGGTCCTCATCGTCCACCGGCAGGAGGGGTG...GGCGCTGGCCCCACGTCCTGTTCCCCTAAAGCTCTGACACCGCCTTCTCTCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp ATGGGGAGAGGGAGAGCTTTGAGGTGGGAGCACACACTGGACCTCGTCCTTCCCCAGGGCGTGGCTTGCTaGATGCGGCCCACACGTTCC +
Preference number: 4 (lower is better)
Translates to: MGRGRALRWEHTLDLVLPQGVAC*MRPTRS
Trigger: GGAACGTGTGGGCCGCATGCAGCAAGCCACGCCCTG...GGGAAGGACGAGGTCCAGTGTGTGCTCCCACCTCAAAGCTCTCCCTCTCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR GCA 90 bp AATAGAGGTCCCCCTTCCCCTCTTGTGAGACCAGGCTCTGTCTCAGGAACAGGCCTGGACAGCCGCGTCTaGTCCGTGGGGCAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: NRGPPSPLVRPGSVSGTGLDSRV*SVGQLA
Trigger: GGCCAGCTGCCCCACGGAGCAGACGCGGCTGTCCAG...GCCTGTTCCTGAGACAGAGCCTGGTCTCACAAGAGGGGAAGGGGGACCTCTATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp GGGAGCAGCCGACCCCCTCCCACCCATCGGTCTCTTTATGTACAGGGACAGCGGAGCTCATGGCGGGCTTaGCAGTGCCAACACTCCACC +
Preference number: 4 (lower is better)
Translates to: GSSRPPPTHRSLYVQGQRSSWRA*QCQHST
Trigger: GGTGGAGTGTTGGCACTGCCAAGCCCGCCATGAGCT...CCGCTGTCCCTGTACATAAAGAGACCGATGGGTGGGAGGGGGTCGGCTGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp AATAGAGGTCCCCCTTCCCCTCTTGTGAGACCAGGCTCTGTCTCAGGAACAGGCCGTCGTCCCCCATGCTaGCCTGGCTGGACAGCCGCG +
Preference number: 4 (lower is better)
Translates to: NRGPPSPLVRPGSVSGTGRRPPC*PGWTAA
Trigger: CGCGGCTGTCCAGCCAGGCCAGCATGGGGGACGACG...GCCTGTTCCTGAGACAGAGCCTGGTCTCACAAGAGGGGAAGGGGGACCTCTATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp ACGGAGAGAAGGCGGTGTCAGAGCTTTAGGGGAACAGGACGTGGGGCCAGCGCCCTCCCCACTGCACCCTaGCAACAGCTCTGCAGGACT +
Preference number: 4 (lower is better)
Translates to: TERRRCQSFRGTGRGASALPTAP*QQLCRT
Trigger: AGTCCTGCAGAGCTGTTGCCAGGGTGCAGTGGGGAG...GGCGCTGGCCCCACGTCCTGTTCCCCTAAAGCTCTGACACCGCCTTCTCTCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp TGGCATCTTCCCTGGGATGTCAGGTCCCCCGTGAGTCTGGAAGGGCTACAGAGACCAGGCAGCCGTACATaGGCAGCGAGAGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: WHLPWDVRSPVSLEGLQRPGSRT*AARAGG
Trigger: GCCTCCTGCTCTCGCTGCTCATGTACGGCTGCCTGG...TCTCTGTAGCCCTTCCAGACTCACGGGGGACCTGACATCCCAGGGAAGATGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR TCA 90 bp ACGGAGAGAAGGCGGTGTCAGAGCTTTAGGGGAACAGGACGTGGGGCCAGCGCCGGCTGTCATGGTACATaGGGCTGTTGCCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: TERRRCQSFRGTGRGASAGCHGT*GCCPGR
Trigger: CCTACCAGGGCAACAGCCTCATGTACCATGACAGCC...GGCGCTGGCCCCACGTCCTGTTCCCCTAAAGCTCTGACACCGCCTTCTCTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp AGGGGCGCACAGACACAGCGTACCGCGTGGTGGCTGACCACATCCGCACACTCAAGAGGTGGGTCTGGTTaGGCCAGTAGGAGGAATGGG +
Preference number: 4 (lower is better)
Translates to: RGAQTQRTAWWLTTSAHSRGGSG*ASRRNG
Trigger: CCCATTCCTCCTACTGGCTCAACCAGACCCACCTCT...TGAGTGTGCGGATGTGGTCAGCCACCACGCGGTACGCTGTGTCTGTGCGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR TCA 90 bp AGTTTAGAGAGAGGACTGAGGTACACAGTCCTCCACATTTCACTCCCCTCCCCAGCGGCCACGACAGCGTaGGCAGCGCCGCGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SLERGLRYTVLHISLPSPAATTA*AAPRPR
Trigger: TCTGGGCCGCGGCGCTGCTCACGCTGTCGTGGCCGC...TGGGGAGGGGAGTGAAATGTGGAGGACTGTGTACCTCAGTCCTCTCTCTAAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp GGGAGCAGCCGACCCCCTCCCACCCATCGGTCTCTTTATGTACAGGGACAGCGGAAGGGGGCTTGGGAGTaGCTGCATGTGTGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: GSSRPPPTHRSLYVQGQRKGAWE*LHVCAC
Trigger: ACAGGCACACACATGCAGTCACTCCCAAGCCCCCTT...CCGCTGTCCCTGTACATAAAGAGACCGATGGGTGGGAGGGGGTCGGCTGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp GGTCCAGGCAGGTTCAGTGCTAGTAGGCAGGTGGGCACTGCTGTCCAGGAAAACCCGCTAAGCAGGCGCTaGGCAGAGCACCAAAGGGGG +
Preference number: 4 (lower is better)
Translates to: GPGRFSASRQVGTAVQENPLSRR*AEHQRG
Trigger: CCCCCTTTGGTGCTCTGCTCAGCGCCTGCTTAGCGG...GTTTTCCTGGACAGCAGTGCCCACCTGCCTACTAGCACTGAACCTGCCTGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp AGGGAGAGCTTTGAGGTGGGAGCACACACTGGACCTCGTCCTTCCCACTCCCCAATGCAGGGCGTGGCTTaGTGCATGCGGCCCACACGT +
Preference number: 4 (lower is better)
Translates to: RESFEVGAHTGPRPSHSPMQGVA*CMRPTR
Trigger: ACGTGTGGGCCGCATGCAGCAAGCCACGCCCTGCAT...TGGGGAGTGGGAAGGACGAGGTCCAGTGTGTGCTCCCACCTCAAAGCTCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR GCA 90 bp AATAGAGGTCCCCCTTCCCCTCTTGTGAGACCAGGCTCTGTCTCAGGAACAGGCTGCGCCACAGGCAGCTaGGCCGGGAGCCGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: NRGPPSPLVRPGSVSGTGCATGS*AGSRRD
Trigger: GTCTCTACGGCTCCCGGCGCAGCTGCCTGTGGCGCA...GCCTGTTCCTGAGACAGAGCCTGGTCTCACAAGAGGGGAAGGGGGACCTCTATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp GAGAGGGAGAGCTTTGAGGTGGGAGCACACACTGGACCTCGTCCTTCCCACTCCACCAGATGCAGGGCGTaGCTTGCTGCATGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: ERESFEVGAHTGPRPSHSTRCRA*LAACGP
Trigger: TGGGCCGCATGCAGCAAGCCACGCCCTGCATCTGGT...GGAGTGGGAAGGACGAGGTCCAGTGTGTGCTCCCACCTCAAAGCTCTCCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR CCA 90 bp GACGAGGGGCGCACAGACACAGCGTACCGCGTGGTGGCTGACCACATCCGCACACTTAAAGGCACCACCTaGCTTCCTAGGCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: DEGRTDTAYRVVADHIRTLKGTT*LPRQPG
Trigger: ACCAGGCTGCCTAGGAAGCCAGGTGGTGCCTTTAAG...TGTGCGGATGTGGTCAGCCACCACGCGGTACGCTGTGTCTGTGCGCCCCTCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR CCA 90 bp AGAGGGAGAGCTTTGAGGTGGGAGCACACACTGGACCTCGTCCTTCCCACTCCCCAGCGTACCGCGTGGTaGCTGACCACATCCGCACAC +
Preference number: 4 (lower is better)
Translates to: RGRALRWEHTLDLVLPTPQRTAW*LTTSAH
Trigger: GTGTGCGGATGTGGTCAGCCACCACGCGGTACGCTG...GGGAGTGGGAAGGACGAGGTCCAGTGTGTGCTCCCACCTCAAAGCTCTCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR CCA 90 bp GGCCCCTGTTGGGAGGCTGAGGAGTTTAGAGAGAGGACTGAGGTACACAGTCCTTCCCCCATGCTGGCCTaGCTGGACAGCCGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: GPCWEAEEFRERTEVHSPSPMLA*LDSRVC
Trigger: GCAGACGCGGCTGTCCAGCCAGGCCAGCATGGGGGA...AGGACTGTGTACCTCAGTCCTCTCTCTAAACTCCTCAGCCTCCCAACAGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp GAAACCCCAATCTTGGGGTCAGCGCCAAGAAGAGGGCAGCAACATTTCCACGGTAGCGGCCGGTGGCTGTaGCCCAGACACCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ETPILGSAPRRGQQHFHGSGRWL*PRHPSC
Trigger: GCAGGAGGGGTGTCTGGGCCACAGCCACCGGCCGCT...ACCGTGGAAATGTTGCTGCCCTCTTCTTGGCGCTGACCCCAAGATTGGGGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp CCCCATATTGCTGACCATGAGCCGCTGGGGATTCATGTCTGGGCTCTGAACCCCGTACCGCGTGGTGGCTaGCCACATCCGCACACTCAG +
Preference number: 4 (lower is better)
Translates to: PHIADHEPLGIHVWALNPVPRGG*PHPHTQ
Trigger: CTGAGTGTGCGGATGTGGTCAGCCACCACGCGGTAC...GGGGTTCAGAGCCCAGACATGAATCCCCAGCGGCTCATGGTCAGCAATATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR TCA 90 bp GGTCCAGGCAGGTTCAGTGCTAGTAGGCAGGTGGGCACTGCTGTCCAGGAAAACGAGGCCCCAGGGGAGTaGGGCCACGAAGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: GPGRFSASRQVGTAVQENEAPGE*GHEGRK
Trigger: TTTCCTTCCTTCGTGGCCTCACTCCCCTGGGGCCTC...GTTTTCCTGGACAGCAGTGCCCACCTGCCTACTAGCACTGAACCTGCCTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp TGGGAGCACACACTGGACCTCGTCCTTCCCACTCCCCATATTGCTGACCATGAGGCGTGGCTTGCTGCATaGGGCCCACACGTTCCCGCA +
Preference number: 4 (lower is better)
Translates to: WEHTLDLVLPTPHIADHEAWLAA*GPHVPA
Trigger: TGCGGGAACGTGTGGGCCGCATGCAGCAAGCCACGC...CTCATGGTCAGCAATATGGGGAGTGGGAAGGACGAGGTCCAGTGTGTGCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR GCA 90 bp GCATCTTCCCTGGGATGTCAGGTCCCCCGTGAGTCTGGAAGGGCTACAGAGAGGTCTGCTTCCCAGGGCTaGAGGGCACCCCCTTACTTG +
Preference number: 4 (lower is better)
Translates to: ASSLGCQVPRESGRATERSASQG*RAPPYL
Trigger: CAAGTAAGGGGGTGCCCTGCAGCCCTGGGAAGCAGA...CCTCTCTGTAGCCCTTCCAGACTCACGGGGGACCTGACATCCCAGGGAAGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR GCA 90 bp TCCACTCCTCCGCACAGGTTTAGGGAGGCAAAGGCCGCCCCCACAGACACCCCAAGCTTTAACGAGTGCTaGCCGGGTGGCATCTCACTC +
Preference number: 4 (lower is better)
Translates to: STPPHRFREAKAAPTDTPSFNEC*PGGISL
Trigger: GAGTGAGATGCCACCCGGGCAGCACTCGTTAAAGCT...TGGGGTGTCTGTGGGGGCGGCCTTTGCCTCCCTAAACCTGTGCGGAGGAGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp AGAGGGAGAGCTTTGAGGTGGGAGCACACACTGGACCTCGTCCTTCCCACTCCCGGTGGGAGCACACACTaGACCTCGTCCTTCCCACTC +
Preference number: 4 (lower is better)
Translates to: RGRALRWEHTLDLVLPTPGGSTH*TSSFPL
Trigger: GAGTGGGAAGGACGAGGTCCAGTGTGTGCTCCCACC...GGGAGTGGGAAGGACGAGGTCCAGTGTGTGCTCCCACCTCAAAGCTCTCCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR CCA 90 bp GAGAGGGAGAGCTTTGAGGTGGGAGCACACACTGGACCTCGTCCTTCCCACTCCACACAGCGTACCGCGTaGTGGCTGACCACATCCGCA +
Preference number: 4 (lower is better)
Translates to: ERESFEVGAHTGPRPSHSTQRTA*WLTTSA
Trigger: TGCGGATGTGGTCAGCCACCACGCGGTACGCTGTGT...GGAGTGGGAAGGACGAGGTCCAGTGTGTGCTCCCACCTCAAAGCTCTCCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR TCA 90 bp ATGGCATCTTCCCTGGGATGTCAGGTCCCCCGTGAGTCTGGAAGGGCTACAGAGGGCAGAGGGACTTGGTaGAAGAGGGCTGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: MASSLGCQVPRESGRATEGRGTW*KRAGWD
Trigger: GTCCCATCCAGCCCTCTTTCACCAAGTCCCTCTGCC...CTCTGTAGCCCTTCCAGACTCACGGGGGACCTGACATCCCAGGGAAGATGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR TCA 90 bp GAAACCCCAATCTTGGGGTCAGCGCCAAGAAGAGGGCAGCAACATTTCCACGGTCCAGGCAGCCGTACATaGGCAGCGAGAGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ETPILGSAPRRGQQHFHGPGSRT*AARAGG
Trigger: GCCTCCTGCTCTCGCTGCTCATGTACGGCTGCCTGG...ACCGTGGAAATGTTGCTGCCCTCTTCTTGGCGCTGACCCCAAGATTGGGGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp CGTACCGCGTGGTGGCTGACCACATCCGCACACTCAGTGTCTGCATCTCTGATGGGAGAGGGAGAGCTTTaGGGTGGGAGCACACACTGG +
Preference number: 4 (lower is better)
Translates to: RTAWWLTTSAHSVSASLMGEGEL*GGSTHW
Trigger: CCAGTGTGTGCTCCCACCTCAAAGCTCTCCCTCTCC...CATCAGAGATGCAGACACTGAGTGTGCGGATGTGGTCAGCCACCACGCGGTACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR TCA 90 bp AGGGGCGCACAGACACAGCGTACCGCGTGGTGGCTGACCACATCCGCACACTCACAGTGTCTGCATCTCTaGTGGCATCTTCCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: RGAQTQRTAWWLTTSAHSQCLHL*WHLPWD
Trigger: ATCCCAGGGAAGATGCCATCAGAGATGCAGACACTG...TGAGTGTGCGGATGTGGTCAGCCACCACGCGGTACGCTGTGTCTGTGCGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR TCA 90 bp CCTCCTTGGGCTGATTCATTGGCCCAGAGCCTCCAGAACTGTGTCCCCAAAGGGCCGGGAAGGCCACCATaGACTCACGGAAGTCCACGT +
Preference number: 4 (lower is better)
Translates to: PPWADSLAQSLQNCVPKGPGRPP*THGSPR
Trigger: ACGTGGACTTCCGTGAGTTCATGGTGGCCTTCCCGG...CCCTTTGGGGACACAGTTCTGGAGGCTCTGGGCCAATGAATCAGCCCAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp TGGTGGCAGGATGCCCCTTTGAAGACCCTGCGACACACAGCAGGGCTTCAGCTCGGAGCGGAAGGTGAGTaGTGTCTGTGCAGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: WWQDAPLKTLRHTAGLQLGAEGE*CLCSEH
Trigger: GTGCTCACTGCACAGACATCACTCACCTTCCGCTCC...GAGCTGAAGCCCTGCTGTGTGTCGCAGGGTCTTCAAAGGGGCATCCTGCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp GAGACTTTAGCCAGGGGAGTTGGCAGGGCAGGAGGGCTGTTCACAGACATGCACTCCAGTTGGGGCTTGTaGCAACGTCCTCAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: ETLARGVGRAGGLFTDMHSSWGL*QRPQSP
Trigger: GGGGGACTGAGGACGTTGTCACAAGCCCCAACTGGA...GTGCATGTCTGTGAACAGCCCTCCTGCCCTGCCAACTCCCCTGGCTAAAGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp GCATCTTCCCTGGGATGTCAGGTCCCCCGTGAGTCTGGAAGGGCTACAGAGAGGACATCAACACGGTGCTaGAGCTCATGGCGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: ASSLGCQVPRESGRATERTSTRC*SSWRAW
Trigger: CCAAGCCCGCCATGAGCTGCAGCACCGTGTTGATGT...CCTCTCTGTAGCCCTTCCAGACTCACGGGGGACCTGACATCCCAGGGAAGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR GCA 90 bp AATAGAGGTCCCCCTTCCCCTCTTGTGAGACCAGGCTCTGTCTCAGGAACAGGCATGCAGGGCGTGGCTTaGTGCATGCGGCCCACACGT +
Preference number: 4 (lower is better)
Translates to: NRGPPSPLVRPGSVSGTGMQGVA*CMRPTR
Trigger: ACGTGTGGGCCGCATGCAGCAAGCCACGCCCTGCAT...GCCTGTTCCTGAGACAGAGCCTGGTCTCACAAGAGGGGAAGGGGGACCTCTATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp CGTACCGCGTGGTGGCTGACCACATCCGCACACTCAGTGTCTGCATCTCTGATGTGGCCTTCCACCAGATaGAGGGCGTGGCTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RTAWWLTTSAHSVSASLMWPSTR*RAWLAA
Trigger: TGCAGCAAGCCACGCCCTGCATCTGGTGGAAGGCCA...CATCAGAGATGCAGACACTGAGTGTGCGGATGTGGTCAGCCACCACGCGGTACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR GCA 90 bp ACGGAGAGAAGGCGGTGTCAGAGCTTTAGGGGAACAGGACGTGGGGCCAGCGCCTGGTCACCAAACCATTaGCCCCTCCATAGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: TERRRCQSFRGTGRGASAWSPNH*PLHRER
Trigger: CCTCTCTCTATGGAGGGGGCAATGGTTTGGTGACCA...GGCGCTGGCCCCACGTCCTGTTCCCCTAAAGCTCTGACACCGCCTTCTCTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp GATGGCTCAGGCGAAGTAAGAAGCATCAGGGGTGAGAGATGTGGGTGGCCCAAGACCAGATGCAGGGCGTaGCTTGCTGCATGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: DGSGEVRSIRGERCGWPKTRCRA*LAACGP
Trigger: TGGGCCGCATGCAGCAAGCCACGCCCTGCATCTGGT...CTTGGGCCACCCACATCTCTCACCCCTGATGCTTCTTACTTCGCCTGAGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp TGGCATCTTCCCTGGGATGTCAGGTCCCCCGTGAGTCTGGAAGGGCTACAGAGAGGCTGTCATGGTACATaGGGCTGTTGCCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: WHLPWDVRSPVSLEGLQRGCHGT*GCCPGR
Trigger: CCTACCAGGGCAACAGCCTCATGTACCATGACAGCC...TCTCTGTAGCCCTTCCAGACTCACGGGGGACCTGACATCCCAGGGAAGATGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR TCA 90 bp GCTTTGAGGTGGGAGCACACACTGGACCTCGTCCTTCCCACTCCCCATATTGCTAGACGGCGTACAACATaGGCAGGAAGGCCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: ALRWEHTLDLVLPTPHIARRRTT*AGRPGG
Trigger: TCCCCCTGGCCTTCCTGCTCATGTTGTACGCCGTCT...AGCAATATGGGGAGTGGGAAGGACGAGGTCCAGTGTGTGCTCCCACCTCAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR TCA 90 bp TGGACCTCGTCCTTCCCACTCCCCATATTGCTGACCATGAGCCGCTGGGGATTCATGTCAGGTCCCCCGTaGGTCTGGAAGGGCTACAGA +
Preference number: 4 (lower is better)
Translates to: WTSSFPLPILLTMSRWGFMSGPP*VWKGYR
Trigger: TCTGTAGCCCTTCCAGACTCACGGGGGACCTGACAT...GAATCCCCAGCGGCTCATGGTCAGCAATATGGGGAGTGGGAAGGACGAGGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR TCA 90 bp AGGCCACGAAGGAAGGAAAGCCCCAAGTTCCCTTCTCCACAGCCTCTAAATCTCGGCCGGAGGTCACAGTaGGGTCTCTACGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RPRRKESPKFPSPQPLNLGRRSQ*GLYAGA
Trigger: GGCTCCTGCGTAGAGACCTCACTGTGACCTCCGGCC...GAGATTTAGAGGCTGTGGAGAAGGGAACTTGGGGCTTTCCTTCCTTCGTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp GAGGCTGCAGCTCACCACCTGTACCTCACAGATGTCCATTCAGAGGAAAGAAGGCCTCAGTCACCGTGGTaGCTCGCCCTGCGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: EAAAHHLYLTDVHSEERRPQSPW*LALRRR
Trigger: TCTGCGACGCAGGGCGAGTCACCACGGTGACTGAGG...CCTTCTTTCCTCTGAATGGACATCTGTGAGGTACAGGTGGTGAGCTGCAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp GAGACTTTAGCCAGGGGAGTTGGCAGGGCAGGAGGGCTGTTCACAGACATGCACGTGATGTCTGTGCAGTaGGCACAGTCCCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: ETLARGVGRAGGLFTDMHVMSVQ*AQSLWT
Trigger: GGTCCAGAGGGACTGTGCTCACTGCACAGACATCAC...GTGCATGTCTGTGAACAGCCCTCCTGCCCTGCCAACTCCCCTGGCTAAAGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp GATGGCTCAGGCGAAGTAAGAAGCATCAGGGGTGAGAGATGTGGGTGGCCCAAGGGCAGGATGCCCCTTTaGAGACCCTGCGACACACAG +
Preference number: 4 (lower is better)
Translates to: DGSGEVRSIRGERCGWPKGRMPL*RPCDTQ
Trigger: CTGTGTGTCGCAGGGTCTTCAAAGGGGCATCCTGCC...CTTGGGCCACCCACATCTCTCACCCCTGATGCTTCTTACTTCGCCTGAGCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp TGGTGGCAGGATGCCCCTTTGAAGACCCTGCGACACACAGCAGGGCTTCAGCTCAAGAAGCATCAGGGGTaGGAGATGTGGGTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: WWQDAPLKTLRHTAGLQLKKHQG*EMWVAQ
Trigger: TTGGGCCACCCACATCTCTCACCCCTGATGCTTCTT...GAGCTGAAGCCCTGCTGTGTGTCGCAGGGTCTTCAAAGGGGCATCCTGCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp GGTCCAGGCAGGTTCAGTGCTAGTAGGCAGGTGGGCACTGCTGTCCAGGAAAACGTGCCTGACACCCTCTaGCAGTTCCGGAGTGCAAAC +
Preference number: 4 (lower is better)
Translates to: GPGRFSASRQVGTAVQENVPDTL*QFRSAN
Trigger: GTTTGCACTCCGGAACTGTCAGAGGGTGTCAGGCAC...GTTTTCCTGGACAGCAGTGCCCACCTGCCTACTAGCACTGAACCTGCCTGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp TTCCCCTCTTGTGAGACCAGGCTCTGTCTCAGGAACAGGCCTGAGGGAGGAGGACCATCCTCCTTGGGCTaGTTCATTGGCCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: FPSCETRLCLRNRPEGGGPSSLG*FIGPEP
Trigger: AGGCTCTGGGCCAATGAATCAGCCCAAGGAGGATGG...TCCTCCTCCCTCAGGCCTGTTCCTGAGACAGAGCCTGGTCTCACAAGAGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp GAGACTTTAGCCAGGGGAGTTGGCAGGGCAGGAGGGCTGTTCACAGACATGCACCTGACTGATTCAGGCTaGGCGCCATTGCCCATCCTC +
Preference number: 4 (lower is better)
Translates to: ETLARGVGRAGGLFTDMHLTDSG*APLPIL
Trigger: GAGGATGGGCAATGGCGCTCAGCCTGAATCAGTCAG...GTGCATGTCTGTGAACAGCCCTCCTGCCCTGCCAACTCCCCTGGCTAAAGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp GCATCTTCCCTGGGATGTCAGGTCCCCCGTGAGTCTGGAAGGGCTACAGAGAGGCTGGTACCTGGGTGGTaGTATAGGCGTCTCCATTGC +
Preference number: 4 (lower is better)
Translates to: ASSLGCQVPRESGRATERLVPGW*YRRLHC
Trigger: GCAATGGAGACGCCTATACCACCACCCAGGTACCAG...CCTCTCTGTAGCCCTTCCAGACTCACGGGGGACCTGACATCCCAGGGAAGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR CCA 90 bp TGGACCTCGTCCTTCCCACTCCCCATATTGCTGACCATGAGCCGCTGGGGATTCGGGAGAGCTTTGAGGTaGGAGCACACACTGGACCTC +
Preference number: 4 (lower is better)
Translates to: WTSSFPLPILLTMSRWGFGRALR*EHTLDL
Trigger: GAGGTCCAGTGTGTGCTCCCACCTCAAAGCTCTCCC...GAATCCCCAGCGGCTCATGGTCAGCAATATGGGGAGTGGGAAGGACGAGGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR CCA 90 bp GGCCCCTGTTGGGAGGCTGAGGAGTTTAGAGAGAGGACTGAGGTACACAGTCCTCAGTCCCTCTGGACCTaGAGTGGGGGCCCAGTTAGA +
Preference number: 4 (lower is better)
Translates to: GPCWEAEEFRERTEVHSPQSLWT*SGGPVR
Trigger: TCTAACTGGGCCCCCACTCCAGGTCCAGAGGGACTG...AGGACTGTGTACCTCAGTCCTCTCTCTAAACTCCTCAGCCTCCCAACAGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp GAAACCCCAATCTTGGGGTCAGCGCCAAGAAGAGGGCAGCAACATTTCCACGGTGGCAGAGGGACTTGGTaGAAGAGGGCTGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: ETPILGSAPRRGQQHFHGGRGTW*KRAGWD
Trigger: GTCCCATCCAGCCCTCTTTCACCAAGTCCCTCTGCC...ACCGTGGAAATGTTGCTGCCCTCTTCTTGGCGCTGACCCCAAGATTGGGGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp GAGGCTGCAGCTCACCACCTGTACCTCACAGATGTCCATTCAGAGGAAAGAAGGCCTGCCGGTGGACGATaGGGACCGGAAAGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: EAAAHHLYLTDVHSEERRPAGGR*GPESRG
Trigger: CCCTCTACTTTCCGGTCCTCATCGTCCACCGGCAGG...CCTTCTTTCCTCTGAATGGACATCTGTGAGGTACAGGTGGTGAGCTGCAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp CTCTTTATGTACAGGGACAGCGGGGGTCTCGGCCCCATCCGGGCCTGTCTTGCGGAGAATGCTTGCCTCTaGCCCTGCCATTGGAATTAT +
Preference number: 4 (lower is better)
Translates to: LFMYRDSGGLGPIRACLAENACL*PCHWNY
Trigger: ATAATTCCAATGGCAGGGTCAGAGGCAAGCATTCTC...CGCAAGACAGGCCCGGATGGGGCCGAGACCCCCGCTGTCCCTGTACATAAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp GAGACTTTAGCCAGGGGAGTTGGCAGGGCAGGAGGGCTGTTCACAGACATGCACTGCATGTGTGGGAGATaGGGCTGTCTGAGACGACCT +
Preference number: 4 (lower is better)
Translates to: ETLARGVGRAGGLFTDMHCMCGR*GCLRRP
Trigger: AGGTCGTCTCAGACAGCCTCATCTCCCACACATGCA...GTGCATGTCTGTGAACAGCCCTCCTGCCCTGCCAACTCCCCTGGCTAAAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp GAGACTTTAGCCAGGGGAGTTGGCAGGGCAGGAGGGCTGTTCACAGACATGCACTCCAGGTGCCCTACATaGGTCCCCCATCACTCTGTA +
Preference number: 4 (lower is better)
Translates to: ETLARGVGRAGGLFTDMHSRCPT*VPHHSV
Trigger: TACAGAGTGATGGGGGACTCATGTAGGGCACCTGGA...GTGCATGTCTGTGAACAGCCCTCCTGCCCTGCCAACTCCCCTGGCTAAAGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp GCTTTGAGGTGGGAGCACACACTGGACCTCGTCCTTCCCACTCCCCATATTGCTCTCACATCAACACGGTaGTGCAGCTCATGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: ALRWEHTLDLVLPTPHIALTSTR*CSSWRA
Trigger: AGCCCGCCATGAGCTGCAGCACCGTGTTGATGTGAG...AGCAATATGGGGAGTGGGAAGGACGAGGTCCAGTGTGTGCTCCCACCTCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR GCA 90 bp AATAGAGGTCCCCCTTCCCCTCTTGTGAGACCAGGCTCTGTCTCAGGAACAGGCCTCACATCAACACGGTaGTGCAGCTCATGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: NRGPPSPLVRPGSVSGTGLTSTR*CSSWRA
Trigger: AGCCCGCCATGAGCTGCAGCACCGTGTTGATGTGAG...GCCTGTTCCTGAGACAGAGCCTGGTCTCACAAGAGGGGAAGGGGGACCTCTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp ATGGCATCTTCCCTGGGATGTCAGGTCCCCCGTGAGTCTGGAAGGGCTACAGAGCACGTTCCCGCACACTaGTCACATCAACACGGTGCT +
Preference number: 4 (lower is better)
Translates to: MASSLGCQVPRESGRATEHVPAH*SHQHGA
Trigger: AGCACCGTGTTGATGTGAGCAGTGTGCGGGAACGTG...CTCTGTAGCCCTTCCAGACTCACGGGGGACCTGACATCCCAGGGAAGATGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR GCA 90 bp AGTTTAGAGAGAGGACTGAGGTACACAGTCCTCCACATTTCACTCCCCTCCCCACAGGGCGTGGCTTGCTaGATGCGGCCCACACGTTCC +
Preference number: 4 (lower is better)
Translates to: SLERGLRYTVLHISLPSPQGVAC*MRPTRS
Trigger: GGAACGTGTGGGCCGCATGCAGCAAGCCACGCCCTG...TGGGGAGGGGAGTGAAATGTGGAGGACTGTGTACCTCAGTCCTCTCTCTAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp AGAGGGAGAGCTTTGAGGTGGGAGCACACACTGGACCTCGTCCTTCCCACTCCCAGGGCTGAGGGCAGATaGTCTAGAGGCGATAAAGAG +
Preference number: 4 (lower is better)
Translates to: RGRALRWEHTLDLVLPTPRAEGR*SRGDKE
Trigger: CTCTTTATCGCCTCTAGAGCATCTGCCCTCAGCCCT...GGGAGTGGGAAGGACGAGGTCCAGTGTGTGCTCCCACCTCAAAGCTCTCCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR GCA 90 bp AATAGAGGTCCCCCTTCCCCTCTTGTGAGACCAGGCTCTGTCTCAGGAACAGGCAATCTCCCATCCGCATaGCAGGGCCTCTCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: NRGPPSPLVRPGSVSGTGNLPSA*QGLSLQ
Trigger: CTGAAGGGAGAGGCCCTGGCATGCGGATGGGAGATT...GCCTGTTCCTGAGACAGAGCCTGGTCTCACAAGAGGGGAAGGGGGACCTCTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp TGGGAGCACACACTGGACCTCGTCCTTCCCACTCCCCATATTGCTGACCATGAGGAGCAGGGGCTGTCATaGTACATGAGGCTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: WEHTLDLVLPTPHIADHEEQGLS*YMRLLP
Trigger: GGGCAACAGCCTCATGTACCATGACAGCCCCTGCTC...CTCATGGTCAGCAATATGGGGAGTGGGAAGGACGAGGTCCAGTGTGTGCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR CCA 90 bp TCCGCACACTCAGTGTCTGCATCTCTGATGGCATCTTCCCTGGGATGTCAGGTCAGCTCATGGCGGGCTTaGCAGTGCCAACACTCCACC +
Preference number: 4 (lower is better)
Translates to: SAHSVSASLMASSLGCQVSSWRA*QCQHST
Trigger: GGTGGAGTGTTGGCACTGCCAAGCCCGCCATGAGCT...GACCTGACATCCCAGGGAAGATGCCATCAGAGATGCAGACACTGAGTGTGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR CCA 90 bp GAGACTTTAGCCAGGGGAGTTGGCAGGGCAGGAGGGCTGTTCACAGACATGCACCAGACACCCCACCTCTaGAGGTCCTTTTCCTCTACC +
Preference number: 4 (lower is better)
Translates to: ETLARGVGRAGGLFTDMHQTPHL*RSFSST
Trigger: GGTAGAGGAAAAGGACCTCCAGAGGTGGGGTGTCTG...GTGCATGTCTGTGAACAGCCCTCCTGCCCTGCCAACTCCCCTGGCTAAAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp GAGGCTGCAGCTCACCACCTGTACCTCACAGATGTCCATTCAGAGGAAAGAAGGAGGCCACACAGTTGGTaGTGCAGGCCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: EAAAHHLYLTDVHSEERRRPHSW*CRPGWA
Trigger: AGCCCAGCCAGGCCTGCACCACCAACTGTGTGGCCT...CCTTCTTTCCTCTGAATGGACATCTGTGAGGTACAGGTGGTGAGCTGCAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp GGCCCCTGTTGGGAGGCTGAGGAGTTTAGAGAGAGGACTGAGGTACACAGTCCTTCCAGGAAAACCTGGTaGGCAGCTGTTTCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GPCWEAEEFRERTEVHSPSRKTW*AAVSPA
Trigger: GGCAGGGGAAACAGCTGCCCACCAGGTTTTCCTGGA...AGGACTGTGTACCTCAGTCCTCTCTCTAAACTCCTCAGCCTCCCAACAGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR CAA 72 bp AGCACACACTGGACCTCGTCCTTCCCACTCCCCATATaGCTGACCATGAGCCGCTGGGGATTCATGTCTGGG +
Preference number: 4 (lower is better)
Translates to: STHWTSSFPLPI*LTMSRWGFMSG
Trigger: CCCAGACATGAATCCCCAGCGGCTCATGGTCAGCAATATGGGGAGTGGGAAGGACGAGGTCCAGTGTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438774.2
3UTR CAA 72 bp CTTCAGACAAGGCCCAACGCGGGGCCCACGGCACGGTaGTCATCTAACAGAAGATCTGTTGAAGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LQTRPNAGPTAR*SSNRRSVEGLD
Trigger: GTCCAGCCCTTCAACAGATCTTCTGTTAGATGACAACCGTGCCGTGGGCCCCGCGTTGGGCCTTGTCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp ACGGAGAGAAGGCGGTGTCAGAGCTTTAGGGGAACAGGACGTGGGGCCAGCGCCTTATCCTCTCTAGCCTaGAATGTGAGCTCAATCCCT +
Preference number: 4 (lower is better)
Translates to: TERRRCQSFRGTGRGASALSSLA*NVSSIP
Trigger: AGGGATTGAGCTCACATTTCAGGCTAGAGAGGATAA...GGCGCTGGCCCCACGTCCTGTTCCCCTAAAGCTCTGACACCGCCTTCTCTCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp GAGACTTTAGCCAGGGGAGTTGGCAGGGCAGGAGGGCTGTTCACAGACATGCACGGAGATGAGGCTGTCTaGGACGACCTAGGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: ETLARGVGRAGGLFTDMHGDEAV*DDLGRN
Trigger: ATTTCTGCCTAGGTCGTCTCAGACAGCCTCATCTCC...GTGCATGTCTGTGAACAGCCCTCCTGCCCTGCCAACTCCCCTGGCTAAAGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp AGGCCACGAAGGAAGGAAAGCCCCAAGTTCCCTTCTCCACAGCCTCTAAATCTCTGGCCTTCCACCAGATaGAGGGCGTGGCTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RPRRKESPKFPSPQPLNLWPSTR*RAWLAA
Trigger: TGCAGCAAGCCACGCCCTGCATCTGGTGGAAGGCCA...GAGATTTAGAGGCTGTGGAGAAGGGAACTTGGGGCTTTCCTTCCTTCGTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp TGGACCTCGTCCTTCCCACTCCCCATATTGCTGACCATGAGCCGCTGGGGATTCTTCTTCGTCGGATCCTaGGTCGAGCTGTGCGTTTCT +
Preference number: 4 (lower is better)
Translates to: WTSSFPLPILLTMSRWGFFFVGS*VELCVS
Trigger: AGAAACGCACAGCTCGACGCAGGATCCGACGAAGAA...GAATCCCCAGCGGCTCATGGTCAGCAATATGGGGAGTGGGAAGGACGAGGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR GCA 90 bp GGCCCCTGTTGGGAGGCTGAGGAGTTTAGAGAGAGGACTGAGGTACACAGTCCTTCCAGAGGTCCCCGTTaGCACCCAGGTCTATGTCAT +
Preference number: 4 (lower is better)
Translates to: GPCWEAEEFRERTEVHSPSRGPR*HPGLCH
Trigger: ATGACATAGACCTGGGTGGCAACGGGGACCTCTGGA...AGGACTGTGTACCTCAGTCCTCTCTCTAAACTCCTCAGCCTCCCAACAGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp GAGGCTGCAGCTCACCACCTGTACCTCACAGATGTCCATTCAGAGGAAAGAAGGCAGAGGAAAGAAGGGTaGTCCAAACGCCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: EAAAHHLYLTDVHSEERRQRKEG*SKRQAP
Trigger: GGGGGCCTGGCGTTTGGAGCACCCTTCTTTCCTCTG...CCTTCTTTCCTCTGAATGGACATCTGTGAGGTACAGGTGGTGAGCTGCAGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp GGCCCCTGTTGGGAGGCTGAGGAGTTTAGAGAGAGGACTGAGGTACACAGTCCTTTGGTGAAAGAGGGCTaGATGGGACGCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GPCWEAEEFRERTEVHSPLVKEG*MGRCSS
Trigger: AGAGGAGCAGCGTCCCATCCAGCCCTCTTTCACCAA...AGGACTGTGTACCTCAGTCCTCTCTCTAAACTCCTCAGCCTCCCAACAGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp CCCCATATTGCTGACCATGAGCCGCTGGGGATTCATGTCTGGGCTCTGAACCCCCTGGGGATTCATGTCTaGGCTCTGAACCCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: PHIADHEPLGIHVWALNPLGIHV*ALNPFR
Trigger: CCTAAAGGGGTTCAGAGCCCAGACATGAATCCCCAG...GGGGTTCAGAGCCCAGACATGAATCCCCAGCGGCTCATGGTCAGCAATATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR CCA 90 bp CATCTCTACCTGAAAGTAAAGCTAAACCCTTTAGAAGCCATGGGCCATGGTATCCGGTGCAGCGGCCGGTaGCTGTGGCCCAGACACCCC +
Preference number: 4 (lower is better)
Translates to: HLYLKVKLNPLEAMGHGIRCSGR*LWPRHP
Trigger: GGGGTGTCTGGGCCACAGCCACCGGCCGCTGCACCG...GATACCATGGCCCATGGCTTCTAAAGGGTTTAGCTTTACTTTCAGGTAGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp CCTCCTTGGGCTGATTCATTGGCCCAGAGCCTCCAGAACTGTGTCCCCAAAGGGAGGAAACCCCAATCTTaGGGTCAGCGCCAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PPWADSLAQSLQNCVPKGRKPQS*GQRQEE
Trigger: CTCTTCTTGGCGCTGACCCCAAGATTGGGGTTTCCT...CCCTTTGGGGACACAGTTCTGGAGGCTCTGGGCCAATGAATCAGCCCAAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp ACGGAGAGAAGGCGGTGTCAGAGCTTTAGGGGAACAGGACGTGGGGCCAGCGCCTTAGATAAACAACAGTaGAGGGAGCGGCAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: TERRRCQSFRGTGRGASALDKQQ*RERQKG
Trigger: TCCTTTCTGCCGCTCCCTCCACTGTTGTTTATCTAA...GGCGCTGGCCCCACGTCCTGTTCCCCTAAAGCTCTGACACCGCCTTCTCTCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp GATGGCTCAGGCGAAGTAAGAAGCATCAGGGGTGAGAGATGTGGGTGGCCCAAGGGTGAGAGATGTGGGTaGCCCAAGGGTTATCCTCTC +
Preference number: 4 (lower is better)
Translates to: DGSGEVRSIRGERCGWPKGERCG*PKGYPL
Trigger: GAGAGGATAACCCTTGGGCCACCCACATCTCTCACC...CTTGGGCCACCCACATCTCTCACCCCTGATGCTTCTTACTTCGCCTGAGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp TGTTGGGAGGCTGAGGAGTTTAGAGAGAGGACTGAGGTACACAGTCCTCCACATCTTGGAGCCCTGAGGTaGCCAGGCTGTCCCCACACA +
Preference number: 4 (lower is better)
Translates to: CWEAEEFRERTEVHSPPHLGALR*PGCPHT
Trigger: TGTGTGGGGACAGCCTGGCCACCTCAGGGCTCCAAG...ATGTGGAGGACTGTGTACCTCAGTCCTCTCTCTAAACTCCTCAGCCTCCCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp TTCCCCTCTTGTGAGACCAGGCTCTGTCTCAGGAACAGGCCTGAGGGAGGAGGACTTGGGCTGATTCATTaGCCCAGAGCCTCCAGAACT +
Preference number: 4 (lower is better)
Translates to: FPSCETRLCLRNRPEGGGLGLIH*PRASRT
Trigger: AGTTCTGGAGGCTCTGGGCCAATGAATCAGCCCAAG...TCCTCCTCCCTCAGGCCTGTTCCTGAGACAGAGCCTGGTCTCACAAGAGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR CAA 72 bp TCCTCTCTTACTCCCACCTGCTTCCAGAGGTCCCCGTaGCCACCCAGGTCTATGTCATGCTCTCTCCCCTTA +
Preference number: 4 (lower is better)
Translates to: SSLTPTCFQRSP*PPRSMSCSLPL
Trigger: TAAGGGGAGAGAGCATGACATAGACCTGGGTGGCAACGGGGACCTCTGGAAGCAGGTGGGAGTAAGAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR CAA 72 bp GCTTGTGACAACGTCCTCAGTCCCCCAGAGATGTGTTaGAGCGACAAGCACACTCCACTCCTCCGCACAGGT +
Preference number: 4 (lower is better)
Translates to: ACDNVLSPPEMC*SDKHTPLLRTG
Trigger: ACCTGTGCGGAGGAGTGGAGTGTGCTTGTCGCTCAAACACATCTCTGGGGGACTGAGGACGTTGTCACAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp GAGGCTGCAGCTCACCACCTGTACCTCACAGATGTCCATTCAGAGGAAAGAAGGTTGGGGCTGGAAGAATaGCTCTGCCAGGGGGATCTC +
Preference number: 4 (lower is better)
Translates to: EAAAHHLYLTDVHSEERRLGLEE*LCQGDL
Trigger: GAGATCCCCCTGGCAGAGTCATTCTTCCAGCCCCAA...CCTTCTTTCCTCTGAATGGACATCTGTGAGGTACAGGTGGTGAGCTGCAGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp AATAGAGGTCCCCCTTCCCCTCTTGTGAGACCAGGCTCTGTCTCAGGAACAGGCAGAGACCTAGCTGACTaGTTCAGGCTGAGCGCCATT +
Preference number: 4 (lower is better)
Translates to: NRGPPSPLVRPGSVSGTGRDLAD*FRLSAI
Trigger: AATGGCGCTCAGCCTGAATCAGTCAGCTAGGTCTCT...GCCTGTTCCTGAGACAGAGCCTGGTCTCACAAGAGGGGAAGGGGGACCTCTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp CCCCATATTGCTGACCATGAGCCGCTGGGGATTCATGTCTGGGCTCTGAACCCCCGCACACTCAGTGTCTaGATCTCTGATGGCATCTTC +
Preference number: 4 (lower is better)
Translates to: PHIADHEPLGIHVWALNPRTLSV*ISDGIF
Trigger: GAAGATGCCATCAGAGATGCAGACACTGAGTGTGCG...GGGGTTCAGAGCCCAGACATGAATCCCCAGCGGCTCATGGTCAGCAATATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR GCA 90 bp AGGCCACGAAGGAAGGAAAGCCCCAAGTTCCCTTCTCCACAGCCTCTAAATCTCGCCAGCTTTAACGAGTaGTGCCCGGGTGGCATCTCA +
Preference number: 4 (lower is better)
Translates to: RPRRKESPKFPSPQPLNLASFNE*CPGGIS
Trigger: TGAGATGCCACCCGGGCAGCACTCGTTAAAGCTGGC...GAGATTTAGAGGCTGTGGAGAAGGGAACTTGGGGCTTTCCTTCCTTCGTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp GGCCCCTGTTGGGAGGCTGAGGAGTTTAGAGAGAGGACTGAGGTACACAGTCCTCCCCTTAGTCACTCGTaGTGGCCAGCTTTAACGAGT +
Preference number: 4 (lower is better)
Translates to: GPCWEAEEFRERTEVHSPPLSHS*WPALTS
Trigger: ACTCGTTAAAGCTGGCCAGCACGAGTGACTAAGGGG...AGGACTGTGTACCTCAGTCCTCTCTCTAAACTCCTCAGCCTCCCAACAGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp GGTCCAGGCAGGTTCAGTGCTAGTAGGCAGGTGGGCACTGCTGTCCAGGAAAACCCCAGGTCTATGTCATaGTCTCTCCCCTTAGTCACT +
Preference number: 4 (lower is better)
Translates to: GPGRFSASRQVGTAVQENPRSMS*SLPLVT
Trigger: AGTGACTAAGGGGAGAGAGCATGACATAGACCTGGG...GTTTTCCTGGACAGCAGTGCCCACCTGCCTACTAGCACTGAACCTGCCTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp GGTCCAGGCAGGTTCAGTGCTAGTAGGCAGGTGGGCACTGCTGTCCAGGAAAACGGCTGTTCACAGACATaGACACTGAAGCACATCAGG +
Preference number: 4 (lower is better)
Translates to: GPGRFSASRQVGTAVQENGCSQT*TLKHIR
Trigger: CCTGATGTGCTTCAGTGTGCATGTCTGTGAACAGCC...GTTTTCCTGGACAGCAGTGCCCACCTGCCTACTAGCACTGAACCTGCCTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp AATAGAGGTCCCCCTTCCCCTCTTGTGAGACCAGGCTCTGTCTCAGGAACAGGCCCTAGAGTCTGTCTGTaGCTGACACCCTCTGACAGT +
Preference number: 4 (lower is better)
Translates to: NRGPPSPLVRPGSVSGTGPRVCL*LTPSDS
Trigger: ACTGTCAGAGGGTGTCAGGCACAGACAGACTCTAGG...GCCTGTTCCTGAGACAGAGCCTGGTCTCACAAGAGGGGAAGGGGGACCTCTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp CATCTCTACCTGAAAGTAAAGCTAAACCCTTTAGAAGCCATGGGCCATGGTATCCTGCTGACGGCGCGCTaGCAGTGCTCGCAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: HLYLKVKLNPLEAMGHGILLTAR*QCSQLR
Trigger: GCGCAGCTGCGAGCACTGCCAGCGCGCCGTCAGCAG...GATACCATGGCCCATGGCTTCTAAAGGGTTTAGCTTTACTTTCAGGTAGAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp GATGGCTCAGGCGAAGTAAGAAGCATCAGGGGTGAGAGATGTGGGTGGCCCAAGAGAAGCCATGGGCCATaGTATCCCCACAATTTGGGC +
Preference number: 4 (lower is better)
Translates to: DGSGEVRSIRGERCGWPKRSHGP*YPHNLG
Trigger: GCCCAAATTGTGGGGATACCATGGCCCATGGCTTCT...CTTGGGCCACCCACATCTCTCACCCCTGATGCTTCTTACTTCGCCTGAGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp AATAGAGGTCCCCCTTCCCCTCTTGTGAGACCAGGCTCTGTCTCAGGAACAGGCATTGCCCATCCTCCTTaGGCTGATTCATTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: NRGPPSPLVRPGSVSGTGIAHPP*ADSLAQ
Trigger: CTGGGCCAATGAATCAGCCCAAGGAGGATGGGCAAT...GCCTGTTCCTGAGACAGAGCCTGGTCTCACAAGAGGGGAAGGGGGACCTCTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp GGCCCCTGTTGGGAGGCTGAGGAGTTTAGAGAGAGGACTGAGGTACACAGTCCTTGTGATGCACCCAATTaGCAGAGACCTGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GPCWEAEEFRERTEVHSPCDAPN*QRPVFS
Trigger: GGAGAAGACAGGTCTCTGTCAATTGGGTGCATCACA...AGGACTGTGTACCTCAGTCCTCTCTCTAAACTCCTCAGCCTCCCAACAGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp CATCTCTACCTGAAAGTAAAGCTAAACCCTTTAGAAGCCATGGGCCATGGTATCGCGGGCTGGCGCAGATaGTTAGGGCGCTGCGCGAGA +
Preference number: 4 (lower is better)
Translates to: HLYLKVKLNPLEAMGHGIAGWRR*LGRCAR
Trigger: TCTCGCGCAGCGCCCTAAGCATCTGCGCCAGCCCGC...GATACCATGGCCCATGGCTTCTAAAGGGTTTAGCTTTACTTTCAGGTAGAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp CATCTCTACCTGAAAGTAAAGCTAAACCCTTTAGAAGCCATGGGCCATGGTATCTCACCTCCCTTTCCCTaGCCCCCGCGCGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: HLYLKVKLNPLEAMGHGISPPFP*PPRGLS
Trigger: ACTGAGGCCGCGCGGGGGGCAGGGAAAGGGAGGTGA...GATACCATGGCCCATGGCTTCTAAAGGGTTTAGCTTTACTTTCAGGTAGAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp TTTGTACAATCTTTGCGCTTAAATCCACGACAAAAAGGCCACAGTGTGATGCACTCTACGCAGGAGCCGTaGCGGTGCAGCGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: FVQSLRLNPRQKGHSVMHSTQEP*RCSGRW
Trigger: CCACCGGCCGCTGCACCGCCACGGCTCCTGCGTAGA...GTGCATCACACTGTGGCCTTTTTGTCGTGGATTTAAGCGCAAAGATTGTACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp AGTTTAGAGAGAGGACTGAGGTACACAGTCCTCCACATTTCACTCCCCTCCCCATTCCACGGTGTTGGATaGAGGCCTAGGGCTGACACC +
Preference number: 4 (lower is better)
Translates to: SLERGLRYTVLHISLPSPFHGVG*RPRADT
Trigger: GGTGTCAGCCCTAGGCCTCCATCCAACACCGTGGAA...TGGGGAGGGGAGTGAAATGTGGAGGACTGTGTACCTCAGTCCTCTCTCTAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp AATAGAGGTCCCCCTTCCCCTCTTGTGAGACCAGGCTCTGTCTCAGGAACAGGCCTTAGTCACTCGTGCTaGCCAGCTTTAACGAGTGCT +
Preference number: 4 (lower is better)
Translates to: NRGPPSPLVRPGSVSGTGLSHSC*PALTSA
Trigger: AGCACTCGTTAAAGCTGGCCAGCACGAGTGACTAAG...GCCTGTTCCTGAGACAGAGCCTGGTCTCACAAGAGGGGAAGGGGGACCTCTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp GAGGCTGCAGCTCACCACCTGTACCTCACAGATGTCCATTCAGAGGAAAGAAGGTGTAGCTGTCCACCCTaGGGCCACACCTACAGGAAT +
Preference number: 4 (lower is better)
Translates to: EAAAHHLYLTDVHSEERRCSCPP*GHTYRN
Trigger: ATTCCTGTAGGTGTGGCCCCAGGGTGGACAGCTACA...CCTTCTTTCCTCTGAATGGACATCTGTGAGGTACAGGTGGTGAGCTGCAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp GGCCCCTGTTGGGAGGCTGAGGAGTTTAGAGAGAGGACTGAGGTACACAGTCCTAAAAAGGCCACAGTGTaGTGCACCCAATTGACAGAG +
Preference number: 4 (lower is better)
Translates to: GPCWEAEEFRERTEVHSPKKATV*CTQLTE
Trigger: CTCTGTCAATTGGGTGCATCACACTGTGGCCTTTTT...AGGACTGTGTACCTCAGTCCTCTCTCTAAACTCCTCAGCCTCCCAACAGGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp CATCTCTACCTGAAAGTAAAGCTAAACCCTTTAGAAGCCATGGGCCATGGTATCAGTGCGCGTAGGCCGTaGGGTACTCGGCCAGCACTC +
Preference number: 4 (lower is better)
Translates to: HLYLKVKLNPLEAMGHGISARRP*GTRPAL
Trigger: GAGTGCTGGCCGAGTACCGCACGGCCTACGCGCACT...GATACCATGGCCCATGGCTTCTAAAGGGTTTAGCTTTACTTTCAGGTAGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp AGTTTAGAGAGAGGACTGAGGTACACAGTCCTCCACATTTCACTCCCCTCCCCAGGTAGACCTGGGTGGTaGTATAGGCGTCTCCATTGC +
Preference number: 4 (lower is better)
Translates to: SLERGLRYTVLHISLPSPGRPGW*YRRLHC
Trigger: GCAATGGAGACGCCTATACCACCACCCAGGTCTACC...TGGGGAGGGGAGTGAAATGTGGAGGACTGTGTACCTCAGTCCTCTCTCTAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp TTTGTACAATCTTTGCGCTTAAATCCACGACAAAAAGGCCACAGTGTGATGCACCCATGCTGGCCTGGCTaGACAGCCGCGTCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: FVQSLRLNPRQKGHSVMHPCWPG*TAASAP
Trigger: CGGAGCAGACGCGGCTGTCCAGCCAGGCCAGCATGG...GTGCATCACACTGTGGCCTTTTTGTCGTGGATTTAAGCGCAAAGATTGTACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp TTTGTACAATCTTTGCGCTTAAATCCACGACAAAAAGGCCACAGTGTGATGCACGCGTGGCTTGCTGCATaGGGCCCACACGTTCCCGCA +
Preference number: 4 (lower is better)
Translates to: FVQSLRLNPRQKGHSVMHAWLAA*GPHVPA
Trigger: TGCGGGAACGTGTGGGCCGCATGCAGCAAGCCACGC...GTGCATCACACTGTGGCCTTTTTGTCGTGGATTTAAGCGCAAAGATTGTACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp AGGCCACGAAGGAAGGAAAGCCCCAAGTTCCCTTCTCCACAGCCTCTAAATCTCGTGACTGCATGTGTGTaGCTGTCTAGGCAACCTAGA +
Preference number: 4 (lower is better)
Translates to: RPRRKESPKFPSPQPLNLVTACV*LSRQPR
Trigger: TCTAGGTTGCCTAGACAGGCACACACATGCAGTCAC...GAGATTTAGAGGCTGTGGAGAAGGGAACTTGGGGCTTTCCTTCCTTCGTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp CATCTCTACCTGAAAGTAAAGCTAAACCCTTTAGAAGCCATGGGCCATGGTATCACCCCAGTCCAGGAGTaGCTGCTCTCCAGGGACTCC +
Preference number: 4 (lower is better)
Translates to: HLYLKVKLNPLEAMGHGITPVQE*LLSRDS
Trigger: GGAGTCCCTGGAGAGCAGGCACTCCTGGACTGGGGT...GATACCATGGCCCATGGCTTCTAAAGGGTTTAGCTTTACTTTCAGGTAGAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp GATGGCTCAGGCGAAGTAAGAAGCATCAGGGGTGAGAGATGTGGGTGGCCCAAGAATGCATTAGCTAGTTaGAATCCAGCCTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: DGSGEVRSIRGERCGWPKNALAS*NPACWS
Trigger: TGACCAGCAGGCTGGATTCCAACTAGCTAATGCATT...CTTGGGCCACCCACATCTCTCACCCCTGATGCTTCTTACTTCGCCTGAGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp TGTTGGGAGGCTGAGGAGTTTAGAGAGAGGACTGAGGTACACAGTCCTCCACATAGTTGGAATCCAGCCTaGTGGTCACCAAACCATTGC +
Preference number: 4 (lower is better)
Translates to: CWEAEEFRERTEVHSPPHSWNPA*WSPNHC
Trigger: GCAATGGTTTGGTGACCAGCAGGCTGGATTCCAACT...ATGTGGAGGACTGTGTACCTCAGTCCTCTCTCTAAACTCCTCAGCCTCCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp TTTGTACAATCTTTGCGCTTAAATCCACGACAAAAAGGCCACAGTGTGATGCACAGACGGCGTACAACATaGGCAGGAAGGCCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: FVQSLRLNPRQKGHSVMHRRRTT*AGRPGG
Trigger: TCCCCCTGGCCTTCCTGCTCATGTTGTACGCCGTCT...GTGCATCACACTGTGGCCTTTTTGTCGTGGATTTAAGCGCAAAGATTGTACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp CATCTCTACCTGAAAGTAAAGCTAAACCCTTTAGAAGCCATGGGCCATGGTATCTCCCCACACAAAGCATaGCATCCAGGTGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: HLYLKVKLNPLEAMGHGISPHKA*HPGASW
Trigger: CCAGCTGGCACCTGGATGTCATGCTTTGTGTGGGGA...GATACCATGGCCCATGGCTTCTAAAGGGTTTAGCTTTACTTTCAGGTAGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp GAGACTTTAGCCAGGGGAGTTGGCAGGGCAGGAGGGCTGTTCACAGACATGCACTATTATCCACCAGTTTaGTTTGTACAATCTTTGCGC +
Preference number: 4 (lower is better)
Translates to: ETLARGVGRAGGLFTDMHYYPPV*FVQSLR
Trigger: GCGCAAAGATTGTACAAATCAAACTGGTGGATAATA...GTGCATGTCTGTGAACAGCCCTCCTGCCCTGCCAACTCCCCTGGCTAAAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp AGTTTAGAGAGAGGACTGAGGTACACAGTCCTCCACATTTCACTCCCCTCCCCATTAGGAACTCAGGGTTaGGGCTGGAAGAATGACTCT +
Preference number: 4 (lower is better)
Translates to: SLERGLRYTVLHISLPSPLGTQG*GWKNDS
Trigger: AGAGTCATTCTTCCAGCCCCAACCCTGAGTTCCTAA...TGGGGAGGGGAGTGAAATGTGGAGGACTGTGTACCTCAGTCCTCTCTCTAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp CATCTCTACCTGAAAGTAAAGCTAAACCCTTTAGAAGCCATGGGCCATGGTATCCCAAAGGGCAGGTCATaGGCTACAACCCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: HLYLKVKLNPLEAMGHGIPKGRS*ATTPVQ
Trigger: CTGGACTGGGGTTGTAGCCCATGACCTGCCCTTTGG...GATACCATGGCCCATGGCTTCTAAAGGGTTTAGCTTTACTTTCAGGTAGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp CATCTCTACCTGAAAGTAAAGCTAAACCCTTTAGAAGCCATGGGCCATGGTATCGCGATGTTGCATAGGTaGAGGCCACACAGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: HLYLKVKLNPLEAMGHGIAMLHR*RPHSWW
Trigger: CCACCAACTGTGTGGCCTCCACCTATGCAACATCGC...GATACCATGGCCCATGGCTTCTAAAGGGTTTAGCTTTACTTTCAGGTAGAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp CATCTCTACCTGAAAGTAAAGCTAAACCCTTTAGAAGCCATGGGCCATGGTATCGTGCTAGTAGGCAGGTaGGCACTGCTGTCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: HLYLKVKLNPLEAMGHGIVLVGR*ALLSRK
Trigger: TTTCCTGGACAGCAGTGCCCACCTGCCTACTAGCAC...GATACCATGGCCCATGGCTTCTAAAGGGTTTAGCTTTACTTTCAGGTAGAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR TCA 90 bp CATCTCTACCTGAAAGTAAAGCTAAACCCTTTAGAAGCCATGGGCCATGGTATCGGTAAGGAGGAGTTCTaGTGGCTCAGGCGAAGTAAG +
Preference number: 4 (lower is better)
Translates to: HLYLKVKLNPLEAMGHGIGKEEF*WLRRSK
Trigger: CTTACTTCGCCTGAGCCATCAGAACTCCTCCTTACC...GATACCATGGCCCATGGCTTCTAAAGGGTTTAGCTTTACTTTCAGGTAGAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp TTTGTACAATCTTTGCGCTTAAATCCACGACAAAAAGGCCACAGTGTGATGCACCGTGGTAGACCTGGGTaGTGGTATAGGCGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: FVQSLRLNPRQKGHSVMHRGRPG*WYRRLH
Trigger: ATGGAGACGCCTATACCACCACCCAGGTCTACCACG...GTGCATCACACTGTGGCCTTTTTGTCGTGGATTTAAGCGCAAAGATTGTACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp GGCCCCTGTTGGGAGGCTGAGGAGTTTAGAGAGAGGACTGAGGTACACAGTCCTAATAGACCAAAGAATTaGTTTCTCTCTAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GPCWEAEEFRERTEVHSPNRPKN*FLSKSV
Trigger: CACAGACTTAGAGAGAAACCAATTCTTTGGTCTATT...AGGACTGTGTACCTCAGTCCTCTCTCTAAACTCCTCAGCCTCCCAACAGGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp TTTGTACAATCTTTGCGCTTAAATCCACGACAAAAAGGCCACAGTGTGATGCACTGTGAGCTCAATCCCTaGGTGCTAAATCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: FVQSLRLNPRQKGHSVMHCELNP*VLNLLG
Trigger: CCCCAGCAGATTTAGCACCCAGGGATTGAGCTCACA...GTGCATCACACTGTGGCCTTTTTGTCGTGGATTTAAGCGCAAAGATTGTACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CCA 90 bp CATCTCTACCTGAAAGTAAAGCTAAACCCTTTAGAAGCCATGGGCCATGGTATCAAGTCTGTGCATGTGTaGGAGATGAGGCTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: HLYLKVKLNPLEAMGHGIKSVHV*EMRLSE
Trigger: CTCAGACAGCCTCATCTCCCACACATGCACAGACTT...GATACCATGGCCCATGGCTTCTAAAGGGTTTAGCTTTACTTTCAGGTAGAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR CAA 72 bp GCAAGATTTAGAGAATGCTTGCCTCTGACCCTGCCATaGGAATTATTTCTCCAGTTGGGGCTTGTGACAACG +
Preference number: 4 (lower is better)
Translates to: ARFRECLPLTLP*ELFLQLGLVTT
Trigger: CGTTGTCACAAGCCCCAACTGGAGAAATAATTCCAATGGCAGGGTCAGAGGCAAGCATTCTCTAAATCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
3UTR CAA 72 bp GAAGGATGGAAGGGTTGGGCAAGATTTAGAGAATGCTaGCCTCTGACCCTGCCATTGGAATTATTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: EGWKGWARFREC*PLTLPLELFLQ
Trigger: CTGGAGAAATAATTCCAATGGCAGGGTCAGAGGCAAGCATTCTCTAAATCTTGCCCAACCCTTCCATCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR GCA 90 bp CATCTCTACCTGAAAGTAAAGCTAAACCCTTTAGAAGCCATGGGCCATGGTATCGCAAGATTTAGAGAATaGTTGCCTCTGACCCTGCCA +
Preference number: 4 (lower is better)
Translates to: HLYLKVKLNPLEAMGHGIARFRE*LPLTLP
Trigger: TGGCAGGGTCAGAGGCAAGCATTCTCTAAATCTTGC...GATACCATGGCCCATGGCTTCTAAAGGGTTTAGCTTTACTTTCAGGTAGAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS GCA 90 bp GCCGCCTACCCCACCGTAGCGGCACGAGGGCGCGTAGCCGCCGCCTaGCCCGCCGCAGCGCGTCCCGAGCCCCGCCAGGTCCATGAGCAC +
Preference number: 5 (lower is better)
Translates to: AAYPTVAARGRVAAA*PAAARPEPRQVHEH
Trigger: GTGCTCATGGACCTGGCGGGGCTCGGGACGCGCTGCGGCGGGGCAGGCGGCGGCTACGCGCCCTCGTGCCGCTACGGTGGGGTAGGCGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS TCA 90 bp CCTGGCTGGACAGCCGCGTCTGCTCCGTGGGGCAGCTGGCCTCGTTaGCGCTCCCGCTGCGGCTGCGCCACAGGCAGCTGCGCCGGGAGC +
Preference number: 5 (lower is better)
Translates to: PGWTAASAPWGSWPR*RSRCGCATGSCAGS
Trigger: GCTCCCGGCGCAGCTGCCTGTGGCGCAGCCGCAGCGGGAGCGTCAACGAGGCCAGCTGCCCCACGGAGCAGACGCGGCTGTCCAGCCAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS GCA 90 bp GGGGCCGGAGGTCACAGTGAGGTCTCTACGCAGGAGCCGTGGCGGTaGAGCGGCCGGTGGCTGTGGCCCAGACACCCCTCCTGCCGGTGG +
Preference number: 5 (lower is better)
Translates to: GAGGHSEVSTQEPWR*SGRWLWPRHPSCRW
Trigger: CCACCGGCAGGAGGGGTGTCTGGGCCACAGCCACCGGCCGCTGCACCGCCACGGCTCCTGCGTAGAGACCTCACTGTGACCTCCGGCCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS GCA 90 bp TCGTCCTCGTCGTCCCCCATGCTGGCCTGGCTGGACAGCCGCGTCTaGTCCGTGGGGCAGCTGGCCTCGTTGACGCTCCCGCTGCGGCTG +
Preference number: 5 (lower is better)
Translates to: SSSSSPMLAWLDSRV*SVGQLASLTLPLRL
Trigger: CAGCCGCAGCGGGAGCGTCAACGAGGCCAGCTGCCCCACGGAGCAGACGCGGCTGTCCAGCCAGGCCAGCATGGGGGACGACGAGGACGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS CCA 90 bp CACTCCGGGGCCGGAGGTCACAGTGAGGTCTCTACGCAGGAGCCGTaGCGGTGCAGCGGCCGGTGGCTGTGGCCCAGACACCCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: HSGAGGHSEVSTQEP*RCSGRWLWPRHPSC
Trigger: GCAGGAGGGGTGTCTGGGCCACAGCCACCGGCCGCTGCACCGCCACGGCTCCTGCGTAGAGACCTCACTGTGACCTCCGGCCCCGGAGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CAA 90 bp CCCTGCGTCGCAGAGGGAGCACAGTCCGGCGAGGGGCAGGCGGGAGGACGGCGCCCACCCCACAAGCCCTaGTCCCCAGGACACATGGAG +
Preference number: 5 (lower is better)
Translates to: PCVAEGAQSGEGQAGGRRPPHKP*SPGHME
Trigger: CTCCATGTGTCCTGGGGACAAGGGCTTGTGGGGTGG...GCGCCGTCCTCCCGCCTGCCCCTCGCCGGACTGTGCTCCCTCTGCGACGCAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS CCA 90 bp GAGGTCTCTACGCAGGAGCCGTGGCGGTGCAGCGGCCGGTGGCTGTaGCCCAGACACCCCTCCTGCCGGTGGACGATGAGGACCGGAAAG +
Preference number: 5 (lower is better)
Translates to: EVSTQEPWRCSGRWL*PRHPSCRWTMRTGK
Trigger: CTTTCCGGTCCTCATCGTCCACCGGCAGGAGGGGTGTCTGGGCCACAGCCACCGGCCGCTGCACCGCCACGGCTCCTGCGTAGAGACCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CAA 90 bp GACGAGGGGCGCACAGACACAGCGTACCGCGTGGTGGCTGACCACATCCGCACACAGCTCATGGCGGGCTaGGCAGTGCCAACACTCCAC +
Preference number: 5 (lower is better)
Translates to: DEGRTDTAYRVVADHIRTQLMAG*AVPTLH
Trigger: GTGGAGTGTTGGCACTGCCAAGCCCGCCATGAGCTG...TGTGCGGATGTGGTCAGCCACCACGCGGTACGCTGTGTCTGTGCGCCCCTCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR CAA 90 bp GGGCGCACAGACACAGCGTACCGCGTGGTGGCTGACCACATCCGCACACTCAGTAGGGCACCCCCTTACTaGGGCCGAGTAGGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: GRTDTAYRVVADHIRTLSRAPPY*GRVGVA
Trigger: TGCCACCCCTACTCGGCCCAAGTAAGGGGGTGCCCT...ACTGAGTGTGCGGATGTGGTCAGCCACCACGCGGTACGCTGTGTCTGTGCGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS GCA 90 bp TGCAGGGCGTGGCTTGCTGCATGCGGCCCACACGTTCCCGCACACTaGTCACATCAACACGGTGCTGCAGCTCATGGCGGGCTTGGCAGT +
Preference number: 5 (lower is better)
Translates to: CRAWLAACGPHVPAH*SHQHGAAAHGGLGS
Trigger: ACTGCCAAGCCCGCCATGAGCTGCAGCACCGTGTTGATGTGAGCAGTGTGCGGGAACGTGTGGGCCGCATGCAGCAAGCCACGCCCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438774.2
ENST00000451188.7
CDS GCA 90 bp TGCATGCGGCCCACACGTTCCCGCACACTGCTCACATCAACACGGTaGTGCAGCTCATGGCGGGCTTGGCAGTGCCAACACTCCACCAGG +
Preference number: 5 (lower is better)
Translates to: CMRPTRSRTLLTSTR*CSSWRAWQCQHSTR
Trigger: CCTGGTGGAGTGTTGGCACTGCCAAGCCCGCCATGAGCTGCAGCACCGTGTTGATGTGAGCAGTGTGCGGGAACGTGTGGGCCGCATGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438774.2
ENST00000451188.7
CDS-3UTR CAA 90 bp TGCTTCCCAGGGCTGCAGGGCACCCCCTTACTTGGGCCGAGTAGGGGTGGCAGATCACGGCAGAGGGACTaGGTGAAAGAGGGCTGGATG +
Preference number: 5 (lower is better)
Translates to: CFPGLQGTPLLGPSRGGRSRQRD*VKEGWM
Trigger: CATCCAGCCCTCTTTCACCAAGTCCCTCTGCCGTGA...TCTGCCACCCCTACTCGGCCCAAGTAAGGGGGTGCCCTGCAGCCCTGGGAAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR CAA 90 bp GCTTTGAGGTGGGAGCACACACTGGACCTCGTCCTTCCCACTCCCCATATTGCTGATGCAGGGCGTGGCTaGCTGCATGCGGCCCACACG +
Preference number: 5 (lower is better)
Translates to: ALRWEHTLDLVLPTPHIADAGRG*LHAAHT
Trigger: CGTGTGGGCCGCATGCAGCAAGCCACGCCCTGCATC...AGCAATATGGGGAGTGGGAAGGACGAGGTCCAGTGTGTGCTCCCACCTCAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR CAA 90 bp AGGCCACGAAGGAAGGAAAGCCCCAAGTTCCCTTCTCCACAGCCTCTAAATCTCGGGCAGCTGGCCTCGTaGACGCTCCCGCTGCGGCTG +
Preference number: 5 (lower is better)
Translates to: RPRRKESPKFPSPQPLNLGQLAS*TLPLRL
Trigger: CAGCCGCAGCGGGAGCGTCAACGAGGCCAGCTGCCC...GAGATTTAGAGGCTGTGGAGAAGGGAACTTGGGGCTTTCCTTCCTTCGTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CAA 90 bp CCTCCTTGGGCTGATTCATTGGCCCAGAGCCTCCAGAACTGTGTCCCCAAAGGGCCATCCGGGCCTGTCTaGCGGCCCTCACCTCCCTTT +
Preference number: 5 (lower is better)
Translates to: PPWADSLAQSLQNCVPKGPSGPV*RPSPPF
Trigger: AAAGGGAGGTGAGGGCCGCAAGACAGGCCCGGATGG...CCCTTTGGGGACACAGTTCTGGAGGCTCTGGGCCAATGAATCAGCCCAAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CAA 90 bp GGGAGCAGCCGACCCCCTCCCACCCATCGGTCTCTTTATGTACAGGGACAGCGGCCTTGGGCTGATTCATaGGCCCAGAGCCTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: GSSRPPPTHRSLYVQGQRPWADS*AQSLQN
Trigger: GTTCTGGAGGCTCTGGGCCAATGAATCAGCCCAAGG...CCGCTGTCCCTGTACATAAAGAGACCGATGGGTGGGAGGGGGTCGGCTGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CAA 90 bp ACGGAGAGAAGGCGGTGTCAGAGCTTTAGGGGAACAGGACGTGGGGCCAGCGCCCCCCCAGAGATGTGTTaGAGCGACAAGCACACTCCA +
Preference number: 5 (lower is better)
Translates to: TERRRCQSFRGTGRGASAPPEMC*SDKHTP
Trigger: TGGAGTGTGCTTGTCGCTCAAACACATCTCTGGGGG...GGCGCTGGCCCCACGTCCTGTTCCCCTAAAGCTCTGACACCGCCTTCTCTCCGT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS TCA 90 bp GGGCTTGGCAGTGCCAACACTCCACCAGGTAGACGGCGTACAACATaGGCAGGAAGGCCAGGGGGATGTAGACATAGCCGTTGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: GLGSANTPPGRRRTT*AGRPGGCRHSRWSR
Trigger: CCTGCTCCAACGGCTATGTCTACATCCCCCTGGCCTTCCTGCTCATGTTGTACGCCGTCTACCTGGTGGAGTGTTGGCACTGCCAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438774.2
ENST00000451188.7
CDS-3UTR CAA 90 bp GGGAGCAGCCGACCCCCTCCCACCCATCGGTCTCTTTATGTACAGGGACAGCGGAAGGAAACCCCAATCTaGGGGTCAGCGCCAAGAAGA +
Preference number: 5 (lower is better)
Translates to: GSSRPPPTHRSLYVQGQRKETPI*GSAPRR
Trigger: TCTTCTTGGCGCTGACCCCAAGATTGGGGTTTCCTT...CCGCTGTCCCTGTACATAAAGAGACCGATGGGTGGGAGGGGGTCGGCTGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CAA 90 bp TGGTGGCAGGATGCCCCTTTGAAGACCCTGCGACACACAGCAGGGCTTCAGCTCAGCACCAAAGGGGGCTaGGGAGTGACTGCATGTGTG +
Preference number: 5 (lower is better)
Translates to: WWQDAPLKTLRHTAGLQLSTKGG*GVTACV
Trigger: CACACATGCAGTCACTCCCAAGCCCCCTTTGGTGCT...GAGCTGAAGCCCTGCTGTGTGTCGCAGGGTCTTCAAAGGGGCATCCTGCCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CAA 90 bp AGGCCACGAAGGAAGGAAAGCCCCAAGTTCCCTTCTCCACAGCCTCTAAATCTCGTGCTGTCTACTGTGTaGACCCGCGGCAGGCGGTGG +
Preference number: 5 (lower is better)
Translates to: RPRRKESPKFPSPQPLNLVLSTV*TRGRRW
Trigger: CCACCGCCTGCCGCGGGTCAACACAGTAGACAGCAC...GAGATTTAGAGGCTGTGGAGAAGGGAACTTGGGGCTTTCCTTCCTTCGTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS TCA 90 bp CCCATATTGCTGACCATGAGCCGCTGGGGATTCATGTCTGGGCTCTaGACCCCTTTAGGCTGGTTCTTCGTCGGATCCTGCGTCGAGCTG +
Preference number: 5 (lower is better)
Translates to: PILLTMSRWGFMSGL*TPLGWFFVGSCVEL
Trigger: CAGCTCGACGCAGGATCCGACGAAGAACCAGCCTAAAGGGGTTCAGAGCCCAGACATGAATCCCCAGCGGCTCATGGTCAGCAATATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS-3UTR CAA 90 bp GATGGCTCAGGCGAAGTAAGAAGCATCAGGGGTGAGAGATGTGGGTGGCCCAAGTCACGGCAGAGGGACTaGGTGAAAGAGGGCTGGATG +
Preference number: 5 (lower is better)
Translates to: DGSGEVRSIRGERCGWPKSRQRD*VKEGWM
Trigger: CATCCAGCCCTCTTTCACCAAGTCCCTCTGCCGTGA...CTTGGGCCACCCACATCTCTCACCCCTGATGCTTCTTACTTCGCCTGAGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CAA 90 bp TTCCCCTCTTGTGAGACCAGGCTCTGTCTCAGGAACAGGCCTGAGGGAGGAGGAGGGCCCACGGCACGGTaGTCATCTAACAGAAGATCT +
Preference number: 5 (lower is better)
Translates to: FPSCETRLCLRNRPEGGGGPTAR*SSNRRS
Trigger: AGATCTTCTGTTAGATGACAACCGTGCCGTGGGCCC...TCCTCCTCCCTCAGGCCTGTTCCTGAGACAGAGCCTGGTCTCACAAGAGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CAA 90 bp AATAGAGGTCCCCCTTCCCCTCTTGTGAGACCAGGCTCTGTCTCAGGAACAGGCTTCCAGAGGTCCCCGTaGCCACCCAGGTCTATGTCA +
Preference number: 5 (lower is better)
Translates to: NRGPPSPLVRPGSVSGTGFQRSP*PPRSMS
Trigger: TGACATAGACCTGGGTGGCAACGGGGACCTCTGGAA...GCCTGTTCCTGAGACAGAGCCTGGTCTCACAAGAGGGGAAGGGGGACCTCTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CAA 90 bp GAAACCCCAATCTTGGGGTCAGCGCCAAGAAGAGGGCAGCAACATTTCCACGGTGAGCCAGAGGCGATGTaGCATAGGTGGAGGCCACAC +
Preference number: 5 (lower is better)
Translates to: ETPILGSAPRRGQQHFHGEPEAM*HRWRPH
Trigger: GTGTGGCCTCCACCTATGCAACATCGCCTCTGGCTC...ACCGTGGAAATGTTGCTGCCCTCTTCTTGGCGCTGACCCCAAGATTGGGGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CAA 90 bp AGTTTAGAGAGAGGACTGAGGTACACAGTCCTCCACATTTCACTCCCCTCCCCATGGCAGGATGCCCCTTaGAAGACCCTGCGACACACA +
Preference number: 5 (lower is better)
Translates to: SLERGLRYTVLHISLPSPWQDAP*KTLRHT
Trigger: TGTGTGTCGCAGGGTCTTCAAAGGGGCATCCTGCCA...TGGGGAGGGGAGTGAAATGTGGAGGACTGTGTACCTCAGTCCTCTCTCTAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CAA 90 bp GAGGCTGCAGCTCACCACCTGTACCTCACAGATGTCCATTCAGAGGAAAGAAGGCTAACAGAAGATCTGTaGAAGGGCTGGACAGGAGGG +
Preference number: 5 (lower is better)
Translates to: EAAAHHLYLTDVHSEERRLTEDL*KGWTGG
Trigger: CCCTCCTGTCCAGCCCTTCAACAGATCTTCTGTTAG...CCTTCTTTCCTCTGAATGGACATCTGTGAGGTACAGGTGGTGAGCTGCAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CAA 90 bp TGTTGGGAGGCTGAGGAGTTTAGAGAGAGGACTGAGGTACACAGTCCTCCACATAACATTTCCACGGTGTaGGATGGAGGCCTAGGGCTG +
Preference number: 5 (lower is better)
Translates to: CWEAEEFRERTEVHSPPHNISTV*DGGLGL
Trigger: CAGCCCTAGGCCTCCATCCAACACCGTGGAAATGTT...ATGTGGAGGACTGTGTACCTCAGTCCTCTCTCTAAACTCCTCAGCCTCCCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CAA 90 bp GAAACCCCAATCTTGGGGTCAGCGCCAAGAAGAGGGCAGCAACATTTCCACGGTGAATTATTTCTCCAGTaGGGGCTTGTGACAACGTCC +
Preference number: 5 (lower is better)
Translates to: ETPILGSAPRRGQQHFHGELFLQ*GLVTTS
Trigger: GGACGTTGTCACAAGCCCCAACTGGAGAAATAATTC...ACCGTGGAAATGTTGCTGCCCTCTTCTTGGCGCTGACCCCAAGATTGGGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CAA 90 bp TTTGTACAATCTTTGCGCTTAAATCCACGACAAAAAGGCCACAGTGTGATGCACCAGCTCATGGCGGGCTaGGCAGTGCCAACACTCCAC +
Preference number: 5 (lower is better)
Translates to: FVQSLRLNPRQKGHSVMHQLMAG*AVPTLH
Trigger: GTGGAGTGTTGGCACTGCCAAGCCCGCCATGAGCTG...GTGCATCACACTGTGGCCTTTTTGTCGTGGATTTAAGCGCAAAGATTGTACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CAA 90 bp AGTTTAGAGAGAGGACTGAGGTACACAGTCCTCCACATTTCACTCCCCTCCCCACCTCTGACCCTGCCATaGGAATTATTTCTCCAGTTG +
Preference number: 5 (lower is better)
Translates to: SLERGLRYTVLHISLPSPPLTLP*ELFLQL
Trigger: CAACTGGAGAAATAATTCCAATGGCAGGGTCAGAGG...TGGGGAGGGGAGTGAAATGTGGAGGACTGTGTACCTCAGTCCTCTCTCTAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS-3UTR CAA 90 bp TGTTGGGAGGCTGAGGAGTTTAGAGAGAGGACTGAGGTACACAGTCCTCCACATAGATTTAGAGAATGCTaGCCTCTGACCCTGCCATTG +
Preference number: 5 (lower is better)
Translates to: CWEAEEFRERTEVHSPPHRFREC*PLTLPL
Trigger: CAATGGCAGGGTCAGAGGCAAGCATTCTCTAAATCT...ATGTGGAGGACTGTGTACCTCAGTCCTCTCTCTAAACTCCTCAGCCTCCCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS CAA 90 bp GCCTGGCTGGACAGCCGCGTCTGCTCCGTGGGGCAGCTGGCCTCGTaGACGCTCCCGCTGCGGCTGCGCCACAGGCAGCTGCGCCGGGAG +
Preference number: 6 (lower is better)
Translates to: AWLDSRVCSVGQLAS*TLPLRLRHRQLRRE
Trigger: CTCCCGGCGCAGCTGCCTGTGGCGCAGCCGCAGCGGGAGCGTCAACGAGGCCAGCTGCCCCACGGAGCAGACGCGGCTGTCCAGCCAGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS TCA 72 bp GGACGGCGCGGGCCACTCCGGGGCCGGAGGTCACAGTaGGGTCTCTACGCAGGAGCCGTGGCGGTGCAGCGG +
Preference number: 6 (lower is better)
Translates to: GRRGPLRGRRSQ*GLYAGAVAVQR
Trigger: CCGCTGCACCGCCACGGCTCCTGCGTAGAGACCTCACTGTGACCTCCGGCCCCGGAGTGGCCCGCGCCGTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS CAA 72 bp GACAGCCGCGTCTGCTCCGTGGGGCAGCTGGCCTCGTaGACGCTCCCGCTGCGGCTGCGCCACAGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: DSRVCSVGQLAS*TLPLRLRHRQL
Trigger: CAGCTGCCTGTGGCGCAGCCGCAGCGGGAGCGTCAACGAGGCCAGCTGCCCCACGGAGCAGACGCGGCTGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS GCA 72 bp TCGTCCCCCATGCTGGCCTGGCTGGACAGCCGCGTCTaGTCCGTGGGGCAGCTGGCCTCGTTGACGCTCCCG +
Preference number: 6 (lower is better)
Translates to: SSPMLAWLDSRV*SVGQLASLTLP
Trigger: CGGGAGCGTCAACGAGGCCAGCTGCCCCACGGAGCAGACGCGGCTGTCCAGCCAGGCCAGCATGGGGGACGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS CCA 72 bp CGTCGTCGTCCTCGTCGTCCCCCATGCTGGCCTGGCTaGACAGCCGCGTCTGCTCCGTGGGGCAGCTGGCCT +
Preference number: 6 (lower is better)
Translates to: RRRPRRPPCWPG*TAASAPWGSWP
Trigger: AGGCCAGCTGCCCCACGGAGCAGACGCGGCTGTCCAGCCAGGCCAGCATGGGGGACGACGAGGACGACGACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS GCA 72 bp GGTCACAGTGAGGTCTCTACGCAGGAGCCGTGGCGGTaGAGCGGCCGGTGGCTGTGGCCCAGACACCCCTCC +
Preference number: 6 (lower is better)
Translates to: GHSEVSTQEPWR*SGRWLWPRHPS
Trigger: GGAGGGGTGTCTGGGCCACAGCCACCGGCCGCTGCACCGCCACGGCTCCTGCGTAGAGACCTCACTGTGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS CCA 72 bp GCCGGAGGTCACAGTGAGGTCTCTACGCAGGAGCCGTaGCGGTGCAGCGGCCGGTGGCTGTGGCCCAGACAC +
Preference number: 6 (lower is better)
Translates to: AGGHSEVSTQEP*RCSGRWLWPRH
Trigger: GTGTCTGGGCCACAGCCACCGGCCGCTGCACCGCCACGGCTCCTGCGTAGAGACCTCACTGTGACCTCCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS CCA 72 bp TGGGACTCACGGCAGAGGGACTTGGTGAAAGAGGGCTaGATGGGACGCTGCTCCTCTCGGGCGGGGCCCTCG +
Preference number: 6 (lower is better)
Translates to: WDSRQRDLVKEG*MGRCSSRAGPS
Trigger: CGAGGGCCCCGCCCGAGAGGAGCAGCGTCCCATCCAGCCCTCTTTCACCAAGTCCCTCTGCCGTGAGTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438774.2
ENST00000451188.7
CDS CCA 72 bp GCGCTGCTGAAGGTGAGGCGCGTCACTGTGGTGACGTaGCACCAGGCCACTGCCCCCAGGCAGCCGTACATG +
Preference number: 6 (lower is better)
Translates to: ALLKVRRVTVVT*HQATAPRQPYM
Trigger: CATGTACGGCTGCCTGGGGGCAGTGGCCTGGTGCCACGTCACCACAGTGACGCGCCTCACCTTCAGCAGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438774.2
ENST00000451188.7
CDS GCA 72 bp TGGCTTGCTGCATGCGGCCCACACGTTCCCGCACACTaGTCACATCAACACGGTGCTGCAGCTCATGGCGGG +
Preference number: 6 (lower is better)
Translates to: WLAACGPHVPAH*SHQHGAAAHGG
Trigger: CCCGCCATGAGCTGCAGCACCGTGTTGATGTGAGCAGTGTGCGGGAACGTGTGGGCCGCATGCAGCAAGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438774.2
ENST00000451188.7
CDS TCA 72 bp GCGCGTAGTCGAACTCAGCCTCCGCCACGTGCGTGTTaGCGCGTTCGTGGTAGACCTGGGTGGTGGTATAGG +
Preference number: 6 (lower is better)
Translates to: ARSRTQPPPRAC*RVRGRPGWWYR
Trigger: CCTATACCACCACCCAGGTCTACCACGAACGCGTCAACACGCACGTGGCGGAGGCTGAGTTCGACTACGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451188.7
CDS CAA 72 bp GCTCACATCAACACGGTGCTGCAGCTCATGGCGGGCTaGGCAGTGCCAACACTCCACCAGGTAGACGGCGTA +
Preference number: 6 (lower is better)
Translates to: AHINTVLQLMAG*AVPTLHQVDGV
Trigger: TACGCCGTCTACCTGGTGGAGTGTTGGCACTGCCAAGCCCGCCATGAGCTGCAGCACCGTGTTGATGTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438774.2
ENST00000451188.7
CDS CCA 72 bp TGTGCGTTTCTCCATGGAGATCTTAAAGGCACCACCTaGCTTCCTAGGCAGCCTGGTACCTGGGTGGTGGTA +
Preference number: 6 (lower is better)
Translates to: CAFLHGDLKGTT*LPRQPGTWVVV
Trigger: TACCACCACCCAGGTACCAGGCTGCCTAGGAAGCCAGGTGGTGCCTTTAAGATCTCCATGGAGAAACGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438774.2
CDS CCA 72 bp CATATTGCTGACCATGAGCCGCTGGGGATTCATGTCTaGGCTCTGAACCCCTTTAGGCTGGTTCTTCGTCGG +
Preference number: 6 (lower is better)
Translates to: HIADHEPLGIHV*ALNPFRLVLRR
Trigger: CCGACGAAGAACCAGCCTAAAGGGGTTCAGAGCCCAGACATGAATCCCCAGCGGCTCATGGTCAGCAATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438774.2