RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM14C (Homo sapiens)

Ensembl gene IDs: ENSG00000111843

Ensembl transcript IDs: ENST00000229563.6, ENST00000466421.5, ENST00000467415.5, ENST00000495549.1, ENST00000541412.5, ENST00000642513.1, ENST00000643226.2, ENST00000643420.1, ENST00000644776.1, ENST00000646203.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GCGAGGTGTCGCCGGAAATGCAGCGGCGGGCGCTCTCCGTCCCGGTaGCGGGGCGAGGAGAGGGGAGCGGCTCTGTTGTGCCTGCGCAGT +
Preference number: 5 (lower is better)
Translates to: ARCRRKCSGGRSPSR*RGEERGAALLCLRS
Trigger: ACTGCGCAGGCACAACAGAGCCGCTCCCCTCTCCTCGCCCCGCCACCGGGACGGAGAGCGCCCGCCGCTGCATTTCCGGCGACACCTCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229563.6
ENST00000541412.5
ENST00000642513.1
ENST00000643226.2
CDS GCA 90 bp AAGGGCGCGCAAGCCGCAGGAATGACTGCGAGGTGTCGCCGGAAATaGAGCGGCGGGCGCTCTCCGTCCCGGTGGCGGGGCGAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: KGAQAAGMTARCRRK*SGGRSPSRWRGEER
Trigger: CCTCTCCTCGCCCCGCCACCGGGACGGAGAGCGCCCGCCGCTGCATTTCCGGCGACACCTCGCAGTCATTCCTGCGGCTTGCGCGCCCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000229563.6
ENST00000466421.5
ENST00000541412.5
ENST00000642513.1
ENST00000643226.2
ENST00000643420.1
CDS CCA 72 bp CGCCGGAAATGCAGCGGCGGGCGCTCTCCGTCCCGGTaGCGGGGCGAGGAGAGGGGAGCGGCTCTGTTGTGC +
Preference number: 6 (lower is better)
Translates to: RRKCSGGRSPSR*RGEERGAALLC
Trigger: GCACAACAGAGCCGCTCCCCTCTCCTCGCCCCGCCACCGGGACGGAGAGCGCCCGCCGCTGCATTTCCGGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229563.6
ENST00000541412.5
ENST00000642513.1
ENST00000643226.2
CDS GCA 72 bp CAAGCCGCAGGAATGACTGCGAGGTGTCGCCGGAAATaGAGCGGCGGGCGCTCTCCGTCCCGGTGGCGGGGC +
Preference number: 6 (lower is better)
Translates to: QAAGMTARCRRK*SGGRSPSRWRG
Trigger: GCCCCGCCACCGGGACGGAGAGCGCCCGCCGCTGCATTTCCGGCGACACCTCGCAGTCATTCCTGCGGCTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000229563.6
ENST00000466421.5
ENST00000467415.5
ENST00000541412.5
ENST00000642513.1
ENST00000643226.2
ENST00000643420.1
ENST00000646203.1
CDS GCA 72 bp GGCTGTCTACAAGGGCGCGCAAGCCGCAGGAATGACTaGGAGGTGTCGCCGGAAATGCAGCGGCGGGCGCTC +
Preference number: 6 (lower is better)
Translates to: GCLQGRASRRND*EVSPEMQRRAL
Trigger: GAGCGCCCGCCGCTGCATTTCCGGCGACACCTCGCAGTCATTCCTGCGGCTTGCGCGCCCTTGTAGACAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000229563.6
ENST00000466421.5
ENST00000467415.5
ENST00000541412.5
ENST00000642513.1
ENST00000643226.2
ENST00000643420.1
ENST00000646203.1
CDS GCA 72 bp CAGCTCTCCAGCAGTCAGAAAGAAGTGTGTCCAACCTaGAAGCTACGCAACCTAAGTCTCAGTATTCTTCAC +
Preference number: 6 (lower is better)
Translates to: QLSSSQKEVCPT*KLRNLSLSILH
Trigger: GTGAAGAATACTGAGACTTAGGTTGCGTAGCTTGCAGGTTGGACACACTTCTTTCTGACTGCTGGAGAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495549.1
ENST00000644776.1