Pregenerated sensors for TMEM14B-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000272097Ensembl transcript IDs: ENST00000606522.1, ENST00000659819.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGGCCAACAGGCAAAGCTCAGCTCTTTGCTAGGCTTGCTTGTACCTaGATCTCGGACAGAGCAAGTTTGTGTCATTGGCGTGGGGCACCT | + |
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Preference number: 5 (lower is better) Translates to: RPTGKAQLFARLACT*ISDRASLCHWRGAP Trigger: AGGTGCCCCACGCCAATGACACAAACTTGCTCTGTCCGAGATGCAGGTACAAGCAAGCCTAGCAAAGAGCTGAGCTTTGCCTGTTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000606522.1 ENST00000659819.1 |
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| CDS GCA 90 bp | GTCCCCAAGTGTCCTCTGTCCAAGAAACACAGTAAAACCCATGGTTaGTCCACAGGCCAACAGGCAAAGCTCAGCTCTTTGCTAGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: VPKCPLSKKHSKTHG*STGQQAKLSSLLGL Trigger: CAAGCCTAGCAAAGAGCTGAGCTTTGCCTGTTGGCCTGTGGAGCAACCATGGGTTTTACTGTGTTTCTTGGACAGAGGACACTTGGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000606522.1 ENST00000659819.1 |
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| CDS TCA 90 bp | GCATCCATCTCCACCTTCCTTGCTCCATTGTTTATCCGACAGCCATaGAGTGAGTGCTCACCATGTGTGCCAGGTGCTATCCTAGATTCT | + |
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Preference number: 5 (lower is better) Translates to: ASISTFLAPLFIRQP*SECSPCVPGAILDS Trigger: AGAATCTAGGATAGCACCTGGCACACATGGTGAGCACTCACTTCATGGCTGTCGGATAAACAATGGAGCAAGGAAGGTGGAGATGGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000606522.1 ENST00000659819.1 |
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| CDS TCA 90 bp | TTCTATTTATGTAGAACAGGTTTTAATCACACATACACTCCTTCCTaGTACAATTCCCCATGTGTAAGCATCCATCTCCACCTTCCTTGC | + |
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Preference number: 5 (lower is better) Translates to: FYLCRTGFNHTYTPS*YNSPCVSIHLHLPC Trigger: GCAAGGAAGGTGGAGATGGATGCTTACACATGGGGAATTGTATCAGGAAGGAGTGTATGTGTGATTAAAACCTGTTCTACATAAATAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000606522.1 ENST00000659819.1 |
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| CDS GCA 72 bp | CATTGGCGTGGGGCACCTTGCCTCTTTGAGTCTCCTTaGTCAAACCTGTCGTCTTCAGCACCACGATCCACA | + |
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Preference number: 6 (lower is better) Translates to: HWRGAPCLFESP*SNLSSSAPRST Trigger: TGTGGATCGTGGTGCTGAAGACGACAGGTTTGAGCAAGGAGACTCAAAGAGGCAAGGTGCCCCACGCCAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000606522.1 ENST00000659819.1 |
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| CDS CAA 72 bp | AGGCTTGCTTGTACCTGCATCTCGGACAGAGCAAGTTaGTGTCATTGGCGTGGGGCACCTTGCCTCTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: RLACTCISDRAS*CHWRGAPCLFE Trigger: CTCAAAGAGGCAAGGTGCCCCACGCCAATGACACAAACTTGCTCTGTCCGAGATGCAGGTACAAGCAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000606522.1 ENST00000659819.1 |
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| CDS CAA 90 bp | CTCTTTGCTAGGCTTGCTTGTACCTGCATCTCGGACAGAGCAAGTTaGTGTCATTGGCGTGGGGCACCTTGCCTCTTTGAGTCTCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: LFARLACTCISDRAS*CHWRGAPCLFESPC Trigger: GCAAGGAGACTCAAAGAGGCAAGGTGCCCCACGCCAATGACACAAACTTGCTCTGTCCGAGATGCAGGTACAAGCAAGCCTAGCAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000606522.1 ENST00000659819.1 |
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| CDS CAA 90 bp | GGTTGCTCCACAGGCCAACAGGCAAAGCTCAGCTCTTTGCTAGGCTaGCTTGTACCTGCATCTCGGACAGAGCAAGTTTGTGTCATTGGC | + |
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Preference number: 6 (lower is better) Translates to: GCSTGQQAKLSSLLG*LVPASRTEQVCVIG Trigger: GCCAATGACACAAACTTGCTCTGTCCGAGATGCAGGTACAAGCAAGCCTAGCAAAGAGCTGAGCTTTGCCTGTTGGCCTGTGGAGCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000606522.1 ENST00000659819.1 |
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| CDS CAA 72 bp | CAAGTTTGTGTCATTGGCGTGGGGCACCTTGCCTCTTaGAGTCTCCTTGCTCAAACCTGTCGTCTTCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: QVCVIGVGHLAS*SLLAQTCRLQH Trigger: GTGCTGAAGACGACAGGTTTGAGCAAGGAGACTCAAAGAGGCAAGGTGCCCCACGCCAATGACACAAACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000606522.1 ENST00000659819.1 |
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| CDS GCA 72 bp | GGCAAAGCTCAGCTCTTTGCTAGGCTTGCTTGTACCTaGATCTCGGACAGAGCAAGTTTGTGTCATTGGCGT | + |
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Preference number: 6 (lower is better) Translates to: GKAQLFARLACT*ISDRASLCHWR Trigger: ACGCCAATGACACAAACTTGCTCTGTCCGAGATGCAGGTACAAGCAAGCCTAGCAAAGAGCTGAGCTTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000606522.1 ENST00000659819.1 |
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| CDS CAA 72 bp | ACAGGCCAACAGGCAAAGCTCAGCTCTTTGCTAGGCTaGCTTGTACCTGCATCTCGGACAGAGCAAGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: TGQQAKLSSLLG*LVPASRTEQVC Trigger: ACAAACTTGCTCTGTCCGAGATGCAGGTACAAGCAAGCCTAGCAAAGAGCTGAGCTTTGCCTGTTGGCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000606522.1 ENST00000659819.1 |
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| CDS CAA 90 bp | TTCCTGATACAATTCCCCATGTGTAAGCATCCATCTCCACCTTCCTaGCTCCATTGTTTATCCGACAGCCATGAAGTGAGTGCTCACCAT | + |
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Preference number: 6 (lower is better) Translates to: FLIQFPMCKHPSPPS*LHCLSDSHEVSAHH Trigger: ATGGTGAGCACTCACTTCATGGCTGTCGGATAAACAATGGAGCAAGGAAGGTGGAGATGGATGCTTACACATGGGGAATTGTATCAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000606522.1 ENST00000659819.1 |
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| CDS CAA 72 bp | CAATTCCCCATGTGTAAGCATCCATCTCCACCTTCCTaGCTCCATTGTTTATCCGACAGCCATGAAGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: QFPMCKHPSPPS*LHCLSDSHEVS Trigger: ACTCACTTCATGGCTGTCGGATAAACAATGGAGCAAGGAAGGTGGAGATGGATGCTTACACATGGGGAATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000606522.1 ENST00000659819.1 |
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| CDS TCA 72 bp | TGTAGAACAGGTTTTAATCACACATACACTCCTTCCTaGTACAATTCCCCATGTGTAAGCATCCATCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: CRTGFNHTYTPS*YNSPCVSIHLH Trigger: GTGGAGATGGATGCTTACACATGGGGAATTGTATCAGGAAGGAGTGTATGTGTGATTAAAACCTGTTCTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000606522.1 ENST00000659819.1 |
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| CDS GCA 72 bp | AGATTCAAGCATTTTAATTTGATCTGTGAGCTTTTCTaGTCACTGATCTCTGAGGTAGTATACCTGGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: RFKHFNLICELF*SLISEVVYLEA Trigger: GGCCTCCAGGTATACTACCTCAGAGATCAGTGAGCAGAAAAGCTCACAGATCAAATTAAAATGCTTGAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000606522.1 ENST00000659819.1 |
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