Pregenerated sensors for TMEM147 (Homo sapiens)
Ensembl gene IDs: ENSG00000105677Ensembl transcript IDs: ENST00000222284.10, ENST00000392204.6, ENST00000392205.2, ENST00000477168.6, ENST00000593027.6, ENST00000595180.5, ENST00000595467.1, ENST00000596232.1, ENST00000599895.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGCAGCCCCGTTACCACTGCTCGGGCCAGTAGAGCTGCCCAACTaGCCAGCGAGCAGAGGTGGACGAAGGTCCTGCAGGAAAATGTCA | + |
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Preference number: 1 (lower is better) Translates to: PAAPLPLLGPVELPN*PASRGGRRSCRKMS Trigger: TGACATTTTCCTGCAGGACCTTCGTCCACCTCTGCTCGCTGGGCAGTTGGGCAGCTCTACTGGCCCGAGCAGTGGTAACGGGGCTGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392205.2 |
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| 3UTR CCA 90 bp | ACTGCTCGGGCCAGTAGAGCTGCCCAACTGCCCAGCGAGCAGAGGTaGACGAAGGTCCTGCAGGAAAATGTCACAATAAGGAAGGGAGAC | + |
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Preference number: 1 (lower is better) Translates to: TARASRAAQLPSEQR*TKVLQENVTIRKGD Trigger: GTCTCCCTTCCTTATTGTGACATTTTCCTGCAGGACCTTCGTCCACCTCTGCTCGCTGGGCAGTTGGGCAGCTCTACTGGCCCGAGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392205.2 |
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| 3UTR CCA 90 bp | AACAAAGGCCTTGTAGACACTGAGGAACATCAGCAGGAGGACAGCTaGCCGGAAGGTGTGGTACAGATCATAGCGTGTTATCATCCAGAC | + |
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Preference number: 1 (lower is better) Translates to: NKGLVDTEEHQQEDS*PEGVVQIIACYHPD Trigger: GTCTGGATGATAACACGCTATGATCTGTACCACACCTTCCGGCCAGCTGTCCTCCTGCTGATGTTCCTCAGTGTCTACAAGGCCTTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593027.6 |
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| 3UTR-3UTR GCA 90 bp | AGCCTAGGAGTGCACATTGACAACGGCGACATACAGGGCCAAAGTGCTGAGGGCGTAGAGCTGCCCAACTaGCCAGCGAGCAGAGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: SLGVHIDNGDIQGQSAEGVELPN*PASRGG Trigger: TCCACCTCTGCTCGCTGGGCAGTTGGGCAGCTCTAC...GCCCTCAGCACTTTGGCCCTGTATGTCGCCGTTGTCAATGTGCACTCCTAGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593027.6 |
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| 3UTR GCA 72 bp | CCGTTACCACTGCTCGGGCCAGTAGAGCTGCCCAACTaGCCAGCGAGCAGAGGTGGACGAAGGTCCTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: PLPLLGPVELPN*PASRGGRRSCR Trigger: CCTGCAGGACCTTCGTCCACCTCTGCTCGCTGGGCAGTTGGGCAGCTCTACTGGCCCGAGCAGTGGTAACGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392205.2 |
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| 3UTR CCA 72 bp | GCCAGTAGAGCTGCCCAACTGCCCAGCGAGCAGAGGTaGACGAAGGTCCTGCAGGAAAATGTCACAATAAGG | + |
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Preference number: 3 (lower is better) Translates to: ASRAAQLPSEQR*TKVLQENVTIR Trigger: CCTTATTGTGACATTTTCCTGCAGGACCTTCGTCCACCTCTGCTCGCTGGGCAGTTGGGCAGCTCTACTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392205.2 |
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| 3UTR CCA 72 bp | CTTGTAGACACTGAGGAACATCAGCAGGAGGACAGCTaGCCGGAAGGTGTGGTACAGATCATAGCGTGTTAT | + |
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Preference number: 3 (lower is better) Translates to: LVDTEEHQQEDS*PEGVVQIIACY Trigger: ATAACACGCTATGATCTGTACCACACCTTCCGGCCAGCTGTCCTCCTGCTGATGTTCCTCAGTGTCTACAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593027.6 |
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| CDS-3UTR TCA 90 bp | GTTACCACTGCTCGGGCCAGTAGAGCTGCCCAACTGCCCAGCGAGCAGAGGTGGACAGGGCCAAAGTGCTaGGGGCCAGCAGCCCCGTTA | + |
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Preference number: 4 (lower is better) Translates to: VTTARASRAAQLPSEQRWTGPKC*GPAAPL Trigger: TAACGGGGCTGCTGGCCCTCAGCACTTTGGCCCTGT...CCACCTCTGCTCGCTGGGCAGTTGGGCAGCTCTACTGGCCCGAGCAGTGGTAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593027.6 |
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| CDS-3UTR TCA 90 bp | GCTGCCCAACTGCCCAGCGAGCAGAGGTGGACGAAGGTCCTGCAGGAAAATGTCAGTGAAACAGGGTCATaGTGCCGGCCGCCCGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: AAQLPSEQRWTKVLQENVSETGS*CRPPGP Trigger: GGGACCGGGCGGCCGGCATCATGACCCTGTTTCACT...GACATTTTCCTGCAGGACCTTCGTCCACCTCTGCTCGCTGGGCAGTTGGGCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392205.2 |
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| CDS-3UTR TCA 90 bp | CCAGCAGCCCCGTTACCACTGCTCGGGCCAGTAGAGCTGCCCAACTGCCCAGCGCCAGGGCAGCAACCATaGTCTTGTACTCTCCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: PAAPLPLLGPVELPNCPAPGQQP*SCTLPC Trigger: GCAAGGGAGAGTACAAGATCATGGTTGCTGCCCTGG...CGCTGGGCAGTTGGGCAGCTCTACTGGCCCGAGCAGTGGTAACGGGGCTGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392205.2 |
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| CDS-3UTR GCA 90 bp | GCAGCCCCGTTACCACTGCTCGGGCCAGTAGAGCTGCCCAACTGCCCAGCGAGCTCCAGTCAAACTCAATaGCCCGGGCTCCGACCCATA | + |
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Preference number: 4 (lower is better) Translates to: AAPLPLLGPVELPNCPASSSQTQ*PGLRPI Trigger: TATGGGTCGGAGCCCGGGGCATTGAGTTTGACTGGA...GCTCGCTGGGCAGTTGGGCAGCTCTACTGGCCCGAGCAGTGGTAACGGGGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392205.2 |
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| CDS-3UTR CCA 90 bp | CCCGTTACCACTGCTCGGGCCAGTAGAGCTGCCCAACTGCCCAGCGAGCAGAGGTGCCGCCTTCCCAGGTaGGAAAGAAAGTGGCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: PVTTARASRAAQLPSEQRCRLPR*ERKWPR Trigger: TCTTGGCCACTTTCTTTCCCACCTGGGAAGGCGGCA...CCTCTGCTCGCTGGGCAGTTGGGCAGCTCTACTGGCCCGAGCAGTGGTAACGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000392205.2 ENST00000593027.6 |
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| CDS-3UTR CCA 90 bp | TTACCACTGCTCGGGCCAGTAGAGCTGCCCAACTGCCCAGCGAGCAGAGGTGGACAGCAGGAGGACAGCTaGCCGGAAGGTGTGGTACAG | + |
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Preference number: 4 (lower is better) Translates to: LPLLGPVELPNCPASRGGQQEDS*PEGVVQ Trigger: CTGTACCACACCTTCCGGCCAGCTGTCCTCCTGCTG...TCCACCTCTGCTCGCTGGGCAGTTGGGCAGCTCTACTGGCCCGAGCAGTGGTAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000392205.2 ENST00000593027.6 |
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| CDS-3UTR CCA 90 bp | GACAACGGCGACATACAGGGCCAAAGTGCTGAGGGCCAGCAGCCCCGTTACCACCAGCAGGAGGACAGCTaGCCGGAAGGTGTGGTACAG | + |
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Preference number: 4 (lower is better) Translates to: DNGDIQGQSAEGQQPRYHQQEDS*PEGVVQ Trigger: CTGTACCACACCTTCCGGCCAGCTGTCCTCCTGCTG...GTGGTAACGGGGCTGCTGGCCCTCAGCACTTTGGCCCTGTATGTCGCCGTTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593027.6 |
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| CDS-3UTR CCA 90 bp | ACCACTGCTCGGGCCAGTAGAGCTGCCCAACTGCCCAGCGAGCAGAGGTGGACGCCCAGCGAGCAGAGGTaGACGAAGGTCTCCATAACA | + |
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Preference number: 4 (lower is better) Translates to: TTARASRAAQLPSEQRWTPSEQR*TKVSIT Trigger: TGTTATGGAGACCTTCGTCCACCTCTGCTCGCTGGG...CGTCCACCTCTGCTCGCTGGGCAGTTGGGCAGCTCTACTGGCCCGAGCAGTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593027.6 |
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| CDS-3UTR CCA 90 bp | ACTGCTCGGGCCAGTAGAGCTGCCCAACTGCCCAGCGAGCAGAGGTGGACGAAGTGCCGCCTTCCCAGGTaGGAAAGAAAGTGGCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: TARASRAAQLPSEQRWTKCRLPR*ERKWPR Trigger: TCTTGGCCACTTTCTTTCCCACCTGGGAAGGCGGCA...CTTCGTCCACCTCTGCTCGCTGGGCAGTTGGGCAGCTCTACTGGCCCGAGCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000392205.2 ENST00000593027.6 |
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| CDS-3UTR TCA 90 bp | CCAGTAGAGCTGCCCAACTGCCCAGCGAGCAGAGGTGGACGAAGGTCCTGCAGGAAGCAGTTCCCGAAGTaGAACAGGGTCATGATGCCG | + |
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Preference number: 4 (lower is better) Translates to: PVELPNCPASRGGRRSCRKQFPK*NRVMMP Trigger: CGGCATCATGACCCTGTTTCACTTCGGGAACTGCTT...CCTGCAGGACCTTCGTCCACCTCTGCTCGCTGGGCAGTTGGGCAGCTCTACTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392205.2 |
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| CDS-3UTR TCA 90 bp | CTGCTCGGGCCAGTAGAGCTGCCCAACTGCCCAGCGAGCAGAGGTGGACGAAGGCGGCATTCCGGGACATaGCAAGGTTTAGACCTATCA | + |
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Preference number: 4 (lower is better) Translates to: LLGPVELPNCPASRGGRRRHSGT*QGLDLS Trigger: TGATAGGTCTAAACCTTGTCATGTCCCGGAATGCCG...CCTTCGTCCACCTCTGCTCGCTGGGCAGTTGGGCAGCTCTACTGGCCCGAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392205.2 |
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| CDS-3UTR CCA 90 bp | CTGCCCAACTGCCCAGCGAGCAGAGGTGGACGAAGGTCCTGCAGGAAAATGTCACCCAGCGAGCAGAGGTaGACGAAGGTCCTGCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: LPNCPASRGGRRSCRKMSPSEQR*TKVLQE Trigger: TTCCTGCAGGACCTTCGTCCACCTCTGCTCGCTGGG...TGACATTTTCCTGCAGGACCTTCGTCCACCTCTGCTCGCTGGGCAGTTGGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392205.2 |
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| CDS-3UTR TCA 90 bp | TCTGAGACACCAAGCCTAGGAGTGCACATTGACAACGGCGACATACAGGGCCAAAGTGAAACAGGGTCATaGTGCCGGCCGCCCGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: SETPSLGVHIDNGDIQGQSETGS*CRPPGP Trigger: GGGACCGGGCGGCCGGCATCATGACCCTGTTTCACT...TTGGCCCTGTATGTCGCCGTTGTCAATGTGCACTCCTAGGCTTGGTGTCTCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593027.6 |
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| CDS-3UTR TCA 90 bp | TTGACAACGGCGACATACAGGGCCAAAGTGCTGAGGGCCAGCAGCCCCGTTACCCCTAGGAGTGCACATTaGCAACGGCGACATACAGGG | + |
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Preference number: 4 (lower is better) Translates to: LTTATYRAKVLRASSPVTPRSAH*QRRHTG Trigger: CCCTGTATGTCGCCGTTGTCAATGTGCACTCCTAGG...GGTAACGGGGCTGCTGGCCCTCAGCACTTTGGCCCTGTATGTCGCCGTTGTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593027.6 |
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| CDS-3UTR GCA 90 bp | GGAACATCAGCAGGAGGACAGCTGGCCGGAAGGTGTGGTACAGATCATAGCGTGGTAGAGCTGCCCAACTaGCCAGCGAGCAGAGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: GTSAGGQLAGRCGTDHSVVELPN*PASRGG Trigger: TCCACCTCTGCTCGCTGGGCAGTTGGGCAGCTCTAC...CACGCTATGATCTGTACCACACCTTCCGGCCAGCTGTCCTCCTGCTGATGTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593027.6 |
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| CDS-3UTR CCA 90 bp | GGTACAGATCATAGCGTGTTATCATCCAGACCTGAGCAGACGCGACGATGTAATGCCACGGCCAGGGCCTaGCACCCACCTGACTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: GTDHSVLSSRPEQTRRCNATARA*HPPDWR Trigger: CCGCCAGTCAGGTGGGTGCCAGGCCCTGGCCGTGGC...ATTACATCGTCGCGTCTGCTCAGGTCTGGATGATAACACGCTATGATCTGTACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593027.6 |
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| CDS-3UTR TCA 90 bp | ATTGACAACGGCGACATACAGGGCCAAAGTGCTGAGGGCCAGCAGCCCCGTTACAAGCAGTTCCCGAAGTaGAACAGGGTCATGATGCCG | + |
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Preference number: 4 (lower is better) Translates to: IDNGDIQGQSAEGQQPRYKQFPK*NRVMMP Trigger: CGGCATCATGACCCTGTTTCACTTCGGGAACTGCTT...GTAACGGGGCTGCTGGCCCTCAGCACTTTGGCCCTGTATGTCGCCGTTGTCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593027.6 |
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| CDS-3UTR GCA 90 bp | CAACTGCCCAGCGAGCAGAGGTGGACGAAGGTCCTGCAGGAAAATGTCACAATAGTAGAGCTGCCCAACTaGCCAGCGAGCAGAGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: QLPSEQRWTKVLQENVTIVELPN*PASRGG Trigger: TCCACCTCTGCTCGCTGGGCAGTTGGGCAGCTCTAC...TATTGTGACATTTTCCTGCAGGACCTTCGTCCACCTCTGCTCGCTGGGCAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392205.2 |
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| CDS-3UTR TCA 90 bp | TTACCACTGCTCGGGCCAGTAGAGCTGCCCAACTGCCCAGCGAGCAGAGGTGGATGTAATGGACCAGACTaGTGTTGGAGTCTATGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LPLLGPVELPNCPASRGGCNGPD*CWSLCS Trigger: TGAGCATAGACTCCAACATCAGTCTGGTCCATTACA...TCCACCTCTGCTCGCTGGGCAGTTGGGCAGCTCTACTGGCCCGAGCAGTGGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392205.2 |
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| CDS-3UTR GCA 90 bp | TTACCACTGCTCGGGCCAGTAGAGCTGCCCAACTGCCCAGCGAGCAGAGGTGGACCAAGAACAGCATCTTaGAGAGTTGGACAAAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: LPLLGPVELPNCPASRGGPRTAS*RVGQRG Trigger: ACCTCTTTGTCCAACTCTGCAAGATGCTGTTCTTGG...TCCACCTCTGCTCGCTGGGCAGTTGGGCAGCTCTACTGGCCCGAGCAGTGGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000392205.2 ENST00000593027.6 |
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| CDS-3UTR CCA 90 bp | AGTAGAGCTGCCCAACTGCCCAGCGAGCAGAGGTGGACGAAGGTCCTGCAGGAAGAGTCTATGCTCATCTaGATGTACTTCCAGTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: SRAAQLPSEQRWTKVLQEESMLI*MYFQSN Trigger: GTTTGACTGGAAGTACATCCAGATGAGCATAGACTC...TTCCTGCAGGACCTTCGTCCACCTCTGCTCGCTGGGCAGTTGGGCAGCTCTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392205.2 |
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| CDS-3UTR TCA 90 bp | GTACAGATCATAGCGTGTTATCATCCAGACCTGAGCAGACGCGACGATGTAATGTGTAATGGACCCCAATaGAGTCATAGATGCCGCCTT | + |
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Preference number: 4 (lower is better) Translates to: VQIIACYHPDLSRRDDVMCNGPQ*SHRCRL Trigger: AAGGCGGCATCTATGACTTCATTGGGGTCCATTACA...CATTACATCGTCGCGTCTGCTCAGGTCTGGATGATAACACGCTATGATCTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593027.6 |
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| CDS-3UTR GCA 90 bp | AAATGTCACAATAAGGAAGGGAGACTAGATAACCCACCCCACTTTGGACCCAGCCCAAGAACAGCATCTTaGAGAGTTGGACAAAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: KCHNKEGRLDNPPHFGPSPRTAS*RVGQRG Trigger: ACCTCTTTGTCCAACTCTGCAAGATGCTGTTCTTGG...GCTGGGTCCAAAGTGGGGTGGGTTATCTAGTCTCCCTTCCTTATTGTGACATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392205.2 |
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| CDS CCA 90 bp | TATCCTGACGCCTCCCAGTGCGGAGTCCCGAGGGCGGTCCCACCGTaGGGCGGCGGGGGCGCGGATAGGCAACGGGGGCGGGTCCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: YPDASQCGVPRAVPP*GGGGADRQRGRVPG Trigger: CCCAGGGACCCGCCCCCGTTGCCTATCCGCGCCCCCGCCGCCCCACGGTGGGACCGCCCTCGGGACTCCGCACTGGGAGGCGTCAGGATA 77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000595467.1 ENST00000596232.1 |
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| CDS GCA 90 bp | CCCGTGGAACCCAGGTGTCCCTTCTCAGGGGTCTGGGCTCCAGGCTaGTGTACGCACCGGGACATAATAAGCTCAGCAGTGGCCCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: PVEPRCPFSGVWAPG*CTHRDIISSAVAQP Trigger: GGGCTGGGCCACTGCTGAGCTTATTATGTCCCGGTGCGTACAGCAGCCTGGAGCCCAGACCCCTGAGAAGGGACACCTGGGTTCCACGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000477168.6 ENST00000595467.1 ENST00000599895.1 |
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| CDS-3UTR CAA 90 bp | GTTACCACTGCTCGGGCCAGTAGAGCTGCCCAACTGCCCAGCGAGCAGAGGTGGTGGACCAGACTGATGTaGGAGTCTATGCTCATCTGG | + |
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Preference number: 5 (lower is better) Translates to: VTTARASRAAQLPSEQRWWTRLM*ESMLIW Trigger: CCAGATGAGCATAGACTCCAACATCAGTCTGGTCCA...CCACCTCTGCTCGCTGGGCAGTTGGGCAGCTCTACTGGCCCGAGCAGTGGTAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392205.2 |
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| CDS TCA 90 bp | TCTGCCACATCCACGCTGGCCTTCATGAACTCCTGCGGGTCAGGTTaGGGCTTAAGTAAGCACAGGGGGACAGGGAGCCCCATTCCTGAA | + |
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Preference number: 5 (lower is better) Translates to: SATSTLAFMNSCGSG*GLSKHRGTGSPIPE Trigger: TTCAGGAATGGGGCTCCCTGTCCCCCTGTGCTTACTTAAGCCTCAACCTGACCCGCAGGAGTTCATGAAGGCCAGCGTGGATGTGGCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000595180.5 ENST00000595467.1 |
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| CDS-3UTR CAA 90 bp | TGCCCAACTGCCCAGCGAGCAGAGGTGGACGAAGGTCCTGCAGGAAAATGTCACGCAGCAACCATGATCTaGTACTCTCCCTTGCCGGCA | + |
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Preference number: 5 (lower is better) Translates to: CPTAQRAEVDEGPAGKCHAATMI*YSPLPA Trigger: TGCCGGCAAGGGAGAGTACAAGATCATGGTTGCTGC...GTGACATTTTCCTGCAGGACCTTCGTCCACCTCTGCTCGCTGGGCAGTTGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392205.2 |
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| CDS CCA 90 bp | GGTGAGGGGATCAAGATAAACCACGTGGGATTTGTGGGAAGTTCGTaGGTAGGAAGAGGGCAGGACAGGTTCTGGGGGCCCATCTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: GEGIKINHVGFVGSS*VGRGQDRFWGPIWK Trigger: CTTCCAGATGGGCCCCCAGAACCTGTCCTGCCCTCTTCCTACCCACGAACTTCCCACAAATCCCACGTGGTTTATCTTGATCCCCTCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000595467.1 |
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| CDS CCA 90 bp | GCCAGGCCTTGGGGAGGAGTATGGCCGCCAGCAGAAATGTGTATGTaGGAGAGCACGACTGCCTACCAGACTGATGTTGGAGTCTATGCT | + |
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Preference number: 5 (lower is better) Translates to: ARPWGGVWPPAEMCM*ESTTAYQTDVGVYA Trigger: AGCATAGACTCCAACATCAGTCTGGTAGGCAGTCGTGCTCTCCCACATACACATTTCTGCTGGCGGCCATACTCCTCCCCAAGGCCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595467.1 ENST00000599895.1 |
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| CDS-3UTR CAA 90 bp | GCCCAACTGCCCAGCGAGCAGAGGTGGACGAAGGTCCTGCAGGAAAATGTCACAGCCAAGAACAGCATCTaGCAGAGTTGGACAAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: AQLPSEQRWTKVLQENVTAKNSI*QSWTKR Trigger: CCTCTTTGTCCAACTCTGCAAGATGCTGTTCTTGGC...TGTGACATTTTCCTGCAGGACCTTCGTCCACCTCTGCTCGCTGGGCAGTTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392205.2 |
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| CDS-3UTR CAA 90 bp | CACAATAAGGAAGGGAGACTAGATAACCCACCCCACTTTGGACCCAGCCCTAAACATTTCCAGAAGGCGTaGTACTCGGACAGGCCGCTG | + |
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Preference number: 5 (lower is better) Translates to: HNKEGRLDNPPHFGPSPKHFQKA*YSDRPL Trigger: CAGCGGCCTGTCCGAGTACAACGCCTTCTGGAAATG...TTTAGGGCTGGGTCCAAAGTGGGGTGGGTTATCTAGTCTCCCTTCCTTATTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392205.2 |
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| CDS-3UTR CAA 90 bp | GGTACAGATCATAGCGTGTTATCATCCAGACCTGAGCAGACGCGACGATGTAATCATTTCCAGAAGGCGTaGTACTCGGACAGGCCGCTG | + |
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Preference number: 5 (lower is better) Translates to: GTDHSVLSSRPEQTRRCNHFQKA*YSDRPL Trigger: CAGCGGCCTGTCCGAGTACAACGCCTTCTGGAAATG...ATTACATCGTCGCGTCTGCTCAGGTCTGGATGATAACACGCTATGATCTGTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593027.6 |
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| CDS-3UTR CAA 90 bp | GGAAAATGTCACAATAAGGAAGGGAGACTAGATAACCCACCCCACTTTGGACCCATCTTGTACTCTCCCTaGCCGGCATTCCGGGACATG | + |
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Preference number: 5 (lower is better) Translates to: GKCHNKEGRLDNPPHFGPILYSP*PAFRDM Trigger: CATGTCCCGGAATGCCGGCAAGGGAGAGTACAAGAT...GGGTCCAAAGTGGGGTGGGTTATCTAGTCTCCCTTCCTTATTGTGACATTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392205.2 |
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| CDS-3UTR CAA 90 bp | GTACAGATCATAGCGTGTTATCATCCAGACCTGAGCAGACGCGACGATGTAATGGCCAAGAACAGCATCTaGCAGAGTTGGACAAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: VQIIACYHPDLSRRDDVMAKNSI*QSWTKR Trigger: CCTCTTTGTCCAACTCTGCAAGATGCTGTTCTTGGC...CATTACATCGTCGCGTCTGCTCAGGTCTGGATGATAACACGCTATGATCTGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593027.6 |
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| CDS TCA 90 bp | AGAACAGCATCTGAGAACAGAAAGCAGAAAGAGGTCACTTCAAGGTaGGGGGATCAAGATAAACCACGTGGGATTTGTGGGAAGTTCGTG | + |
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Preference number: 5 (lower is better) Translates to: RTASENRKQKEVTSR*GDQDKPRGICGKFV Trigger: CACGAACTTCCCACAAATCCCACGTGGTTTATCTTGATCCCCTCACCTTGAAGTGACCTCTTTCTGCTTTCTGTTCTCAGATGCTGTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000595467.1 |
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| CDS TCA 72 bp | TCCACGCTGGCCTTCATGAACTCCTGCGGGTCAGGTTaGGGCTTAAGTAAGCACAGGGGGACAGGGAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: STLAFMNSCGSG*GLSKHRGTGSP Trigger: GGGGCTCCCTGTCCCCCTGTGCTTACTTAAGCCTCAACCTGACCCGCAGGAGTTCATGAAGGCCAGCGTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000595180.5 ENST00000595467.1 |
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| CDS GCA 72 bp | CCCAGGTGTCCCTTCTCAGGGGTCTGGGCTCCAGGCTaGTGTACGCACCGGGACATAATAAGCTCAGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: PRCPFSGVWAPG*CTHRDIISSAV Trigger: CACTGCTGAGCTTATTATGTCCCGGTGCGTACAGCAGCCTGGAGCCCAGACCCCTGAGAAGGGACACCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000477168.6 ENST00000595467.1 ENST00000599895.1 |
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| CDS CAA 72 bp | GATTCTCCAGTACTCAGACACCTTCAGCACCAGGCTTaGAGCCCCTGCCCTCCAGCACCCCCGTGGAACCCA | + |
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Preference number: 6 (lower is better) Translates to: DSPVLRHLQHQA*SPCPPAPPWNP Trigger: TGGGTTCCACGGGGGTGCTGGAGGGCAGGGGCTCAAAGCCTGGTGCTGAAGGTGTCTGAGTACTGGAGAATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000477168.6 ENST00000595467.1 ENST00000599895.1 |
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| CDS CAA 72 bp | AACACGTGGCTTCCCGGTGGCCCTCACCTTGCAGAGTaGGACAAAGAGGTAGGTGACTCCAGCCTGGACGCA | + |
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Preference number: 6 (lower is better) Translates to: NTWLPGGPHLAE*DKEVGDSSLDA Trigger: TGCGTCCAGGCTGGAGTCACCTACCTCTTTGTCCAACTCTGCAAGGTGAGGGCCACCGGGAAGCCACGTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000595467.1 ENST00000596232.1 |
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| CDS CAA 90 bp | GCAGTGGCCCAGCCCAGGGCAGCAACCATGATCTTGTACTCTCCCTaGCCGGCATTCCGGGACATGACAAGGTTTAGACCTATCAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: AVAQPRAATMILYSP*PAFRDMTRFRPIRS Trigger: AGACCTGATAGGTCTAAACCTTGTCATGTCCCGGAATGCCGGCAAGGGAGAGTACAAGATCATGGTTGCTGCCCTGGGCTGGGCCACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000222284.10 ENST00000392204.6 ENST00000392205.2 ENST00000477168.6 ENST00000595180.5 ENST00000595467.1 ENST00000599895.1 |
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| CDS CCA 72 bp | GTAGGAAGAGGGCAGGACAGGTTCTGGGGGCCCATCTaGAAGAGGAACCACCAGATGGTGGCAAAATTACAG | + |
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Preference number: 6 (lower is better) Translates to: VGRGQDRFWGPI*KRNHQMVAKLQ Trigger: CTGTAATTTTGCCACCATCTGGTGGTTCCTCTTCCAGATGGGCCCCCAGAACCTGTCCTGCCCTCTTCCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000595467.1 |
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| CDS CCA 72 bp | ATCAAGATAAACCACGTGGGATTTGTGGGAAGTTCGTaGGTAGGAAGAGGGCAGGACAGGTTCTGGGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: IKINHVGFVGSS*VGRGQDRFWGP Trigger: GGGCCCCCAGAACCTGTCCTGCCCTCTTCCTACCCACGAACTTCCCACAAATCCCACGTGGTTTATCTTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000595467.1 |
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| CDS CCA 72 bp | TGGGGAGGAGTATGGCCGCCAGCAGAAATGTGTATGTaGGAGAGCACGACTGCCTACCAGACTGATGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: WGGVWPPAEMCM*ESTTAYQTDVG Trigger: TCCAACATCAGTCTGGTAGGCAGTCGTGCTCTCCCACATACACATTTCTGCTGGCGGCCATACTCCTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595467.1 ENST00000599895.1 |
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| CDS CAA 72 bp | CAGCCCAGGGCAGCAACCATGATCTTGTACTCTCCCTaGCCGGCATTCCGGGACATGACAAGGTTTAGACCT | + |
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Preference number: 6 (lower is better) Translates to: QPRAATMILYSP*PAFRDMTRFRP Trigger: AGGTCTAAACCTTGTCATGTCCCGGAATGCCGGCAAGGGAGAGTACAAGATCATGGTTGCTGCCCTGGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000222284.10 ENST00000392204.6 ENST00000392205.2 ENST00000477168.6 ENST00000595180.5 ENST00000595467.1 ENST00000599895.1 |
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| CDS CAA 72 bp | GTATGTGGGAGAGCACGACTGCCTACCAGACTGATGTaGGAGTCTATGCTCATCTGGATGTACTTCCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: VCGRARLPTRLM*ESMLIWMYFQS Trigger: TGACTGGAAGTACATCCAGATGAGCATAGACTCCAACATCAGTCTGGTAGGCAGTCGTGCTCTCCCACATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000595467.1 ENST00000599895.1 |
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| CDS TCA 72 bp | AATGTGTATGTGGGAGAGCACGACTGCCTACCAGACTaGTGTTGGAGTCTATGCTCATCTGGATGTACTTCC | + |
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Preference number: 6 (lower is better) Translates to: NVYVGEHDCLPD*CWSLCSSGCTS Trigger: GGAAGTACATCCAGATGAGCATAGACTCCAACATCAGTCTGGTAGGCAGTCGTGCTCTCCCACATACACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000595467.1 ENST00000599895.1 |
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