RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM144 (Homo sapiens)

Ensembl gene IDs: ENSG00000164124

Ensembl transcript IDs: ENST00000296529.11, ENST00000502698.5, ENST00000503200.5, ENST00000503404.5, ENST00000504569.5, ENST00000505049.5, ENST00000505189.5, ENST00000508243.5, ENST00000509278.5, ENST00000511038.5, ENST00000511532.5, ENST00000512272.1, ENST00000512481.5, ENST00000513744.5, ENST00000514346.5, ENST00000514558.5, ENST00000514971.1

Found 320 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTGCTATGTTGCCTAGGCTGGCAGATTTGCACTCTTGGGCTAAGTaGCCCTCCTACTTCAGCCGCCCCAGCAGCTGGGATTATAGTAGT +
Preference number: 1 (lower is better)
Translates to: LAMLPRLADLHSWAK*PSYFSRPSSWDYSS
Trigger: ACTACTATAATCCCAGCTGCTGGGGCGGCTGAAGTAGGAGGGTCACTTAGCCCAAGAGTGCAAATCTGCCAGCCTAGGCAACATAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
3UTR TCA 90 bp TTCCATTGTTTTGGAGGATGGTTGGGCAGGAGGTGTCTGGATCCCTaGAGCAGGCAAGGAACCCTTTCCCAAAGCCAACTCCTCCCTTCT +
Preference number: 1 (lower is better)
Translates to: FHCFGGWLGRRCLDP*SRQGTLSQSQLLPS
Trigger: AGAAGGGAGGAGTTGGCTTTGGGAAAGGGTTCCTTGCCTGCTTCAGGGATCCAGACACCTCCTGCCCAACCATCCTCCAAAACAATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR TCA 90 bp CTCCTGGAAGTGAGCATCCAAAGGGTTGCAGCTTACGAGTTACTGTaGAGGTATTGGGTGAGGAGTTGGGACAGGAGATGTGGTTGGGTG +
Preference number: 1 (lower is better)
Translates to: LLEVSIQRVAAYELL*RYWVRSWDRRCGWV
Trigger: CACCCAACCACATCTCCTGTCCCAACTCCTCACCCAATACCTTCACAGTAACTCGTAAGCTGCAACCCTTTGGATGCTCACTTCCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR CCA 90 bp TTATTTTGTTCCATTGTTTTGGAGGATGGTTGGGCAGGAGGTGTCTaGATCCCTGAAGCAGGCAAGGAACCCTTTCCCAAAGCCAACTCC +
Preference number: 1 (lower is better)
Translates to: LFCSIVLEDGWAGGV*IPEAGKEPFPKANS
Trigger: GGAGTTGGCTTTGGGAAAGGGTTCCTTGCCTGCTTCAGGGATCCAGACACCTCCTGCCCAACCATCCTCCAAAACAATGGAACAAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR TCA 90 bp GGACCAGCAGTGATTATTGGAAAACTGACCACAGCACTCAGAGAGTaGTTTGCTATGAACCAACAGCAGGTAGCTATAGCCCAAAGTACT +
Preference number: 1 (lower is better)
Translates to: GPAVIIGKLTTALRE*FAMNQQQVAIAQST
Trigger: AGTACTTTGGGCTATAGCTACCTGCTGTTGGTTCATAGCAAATCACTCTCTGAGTGCTGTGGTCAGTTTTCCAATAATCACTGCTGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511532.5
3UTR TCA 90 bp AATGGCCCAAGAGATTTCCTGACTGTACCCTCCCTAACTTTACCATaGAACAACCTTAATGGTTCTCCTATTCTGACTTTCAGACAAACT +
Preference number: 1 (lower is better)
Translates to: NGPRDFLTVPSLTLP*NNLNGSPILTFRQT
Trigger: AGTTTGTCTGAAAGTCAGAATAGGAGAACCATTAAGGTTGTTTCATGGTAAAGTTAGGGAGGGTACAGTCAGGAAATCTCTTGGGCCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR GCA 90 bp TCTGCGTGCATTATGTGTATTATCACACATCTTTATTCATCTAGGTaGAGTCTTCTGTGCCTATCTAGAGGTTTCTCAGGGACAAAATTG +
Preference number: 1 (lower is better)
Translates to: SACIMCIITHLYSSR*SLLCLSRGFSGTKL
Trigger: CAATTTTGTCCCTGAGAAACCTCTAGATAGGCACAGAAGACTGCACCTAGATGAATAAAGATGTGTGATAATACACATAATGCACGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR TCA 90 bp AGTTTTCCTTTGGCAATAACGGTTTCTTTCATCATAAGGAGCTCATaGTGCATGGTTCTGTACCCATCAATCATGCTGTTTATGGATCTT +
Preference number: 1 (lower is better)
Translates to: SFPLAITVSFIIRSS*CMVLYPSIMLFMDL
Trigger: AAGATCCATAAACAGCATGATTGATGGGTACAGAACCATGCATCATGAGCTCCTTATGATGAAAGAAACCGTTATTGCCAAAGGAAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR GCA 90 bp ATGTGTATTATCACACATCTTTATTCATCTAGGTGCAGTCTTCTGTaGCTATCTAGAGGTTTCTCAGGGACAAAATTGCACATAAGCAAG +
Preference number: 1 (lower is better)
Translates to: MCIITHLYSSRCSLL*LSRGFSGTKLHISK
Trigger: CTTGCTTATGTGCAATTTTGTCCCTGAGAAACCTCTAGATAGGCACAGAAGACTGCACCTAGATGAATAAAGATGTGTGATAATACACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR GCA 90 bp CCCGTGTGCTTGCTGAGAAGCTCAACTGCGGAAATATTGATTGATTaGTACATAGACCTACCCATAATAAATAAGCTAAGATATTTTACA +
Preference number: 1 (lower is better)
Translates to: PVCLLRSSTAEILID*YIDLPIINKLRYFT
Trigger: TGTAAAATATCTTAGCTTATTTATTATGGGTAGGTCTATGTAGCAATCAATCAATATTTCCGCAGTTGAGCTTCTCAGCAAGCACACGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR GCA 90 bp ATATCACCTAGTAGAGATCTGTTAATCAAAATAAATAAACCCGTGTaGTTGCTGAGAAGCTCAACTGCGGAAATATTGATTGATTGCTAC +
Preference number: 1 (lower is better)
Translates to: ISPSRDLLIKINKPV*LLRSSTAEILIDCY
Trigger: GTAGCAATCAATCAATATTTCCGCAGTTGAGCTTCTCAGCAAGCACACGGGTTTATTTATTTTGATTAACAGATCTCTACTAGGTGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR-3UTR TCA 90 bp CACCAGAAGTTTGCTCCTGGAAGTGAGCATCCAAAGGGTTGCAGCTTACGAGTTTGTGAAGGTATTGGGTaGGGAGTTGGGACAGGAGAT +
Preference number: 2 (lower is better)
Translates to: HQKFAPGSEHPKGCSLRVCEGIG*GVGTGD
Trigger: ATCTCCTGTCCCAACTCCTCACCCAATACCTTCACA...AACTCGTAAGCTGCAACCCTTTGGATGCTCACTTCCAGGAGCAAACTTCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR CAA 90 bp AGTGAGCATCCAAAGGGTTGCAGCTTACGAGTTACTGTGAAGGTATaGGGTGAGGAGTTGGGACAGGAGATGTGGTTGGGTGGAATACAT +
Preference number: 2 (lower is better)
Translates to: SEHPKGCSLRVTVKV*GEELGQEMWLGGIH
Trigger: ATGTATTCCACCCAACCACATCTCCTGTCCCAACTCCTCACCCAATACCTTCACAGTAACTCGTAAGCTGCAACCCTTTGGATGCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR-3UTR TCA 90 bp CCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCCTCACTTCAAGGCTCCAGTCAAGATaGTGCAAAATGCAAGTATCA +
Preference number: 2 (lower is better)
Translates to: PLEGKALPPRPRYFCLTSRLQSR*CKMQVS
Trigger: TGATACTTGCATTTTGCATCATCTTGACTGGAGCCT...TGAAGTGAGGCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511532.5
3UTR-3UTR CCA 90 bp CACCAGAAGTTTGCTCCTGGAAGTGAGCATCCAAAGGGTTGCAGCTTACGAGTTGACAGGAGATGTGGTTaGGTGGAATACATCATAACC +
Preference number: 2 (lower is better)
Translates to: HQKFAPGSEHPKGCSLRVDRRCG*VEYIIT
Trigger: GGTTATGATGTATTCCACCCAACCACATCTCCTGTC...AACTCGTAAGCTGCAACCCTTTGGATGCTCACTTCCAGGAGCAAACTTCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR-3UTR TCA 90 bp TTAGAGCCTGGGTTCATGACAATGAGGCTTTGCCCTGAAGTCACTTTTGTATATAACCCGTGTGCTTGCTaGGAAGCTCAACTGCGGAAA +
Preference number: 2 (lower is better)
Translates to: LEPGFMTMRLCPEVTFVYNPCAC*EAQLRK
Trigger: TTTCCGCAGTTGAGCTTCTCAGCAAGCACACGGGTT...ATATACAAAAGTGACTTCAGGGCAAAGCCTCATTGTCATGAACCCAGGCTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR-3UTR CCA 90 bp AAGGAGCTCATGATGCATGGTTCTGTACCCATCAATCATGCTGTTTATGGATCTGTTTTGGAGGATGGTTaGGCAGGAGGTGTCTGGATC +
Preference number: 2 (lower is better)
Translates to: KELMMHGSVPINHAVYGSVLEDG*AGGVWI
Trigger: GATCCAGACACCTCCTGCCCAACCATCCTCCAAAAC...AGATCCATAAACAGCATGATTGATGGGTACAGAACCATGCATCATGAGCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR-3UTR GCA 90 bp CCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCCTCACTTCACTGTGTTCTAGATTATaGAACACTAGGTACATACTG +
Preference number: 2 (lower is better)
Translates to: PLEGKALPPRPRYFCLTSLCSRL*NTRYIL
Trigger: CAGTATGTACCTAGTGTTGCATAATCTAGAACACAG...TGAAGTGAGGCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
3UTR-3UTR CCA 90 bp CATAAACTCCATTTTGTTAATGAGGGGCCTGACACAGAGGGCTTAGGAACTTGTGTGCGCCACCCTGCCTaGCTTAATTTCAGTTTTCTT +
Preference number: 2 (lower is better)
Translates to: HKLHFVNEGPDTEGLGTCVRHPA*LNFSFL
Trigger: AAGAAAACTGAAATTAAGCCAGGCAGGGTGGCGCAC...ACAAGTTCCTAAGCCCTCTGTGTCAGGCCCCTCATTAACAAAATGGAGTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
3UTR-3UTR CCA 90 bp AAGGAGCTCATGATGCATGGTTCTGTACCCATCAATCATGCTGTTTATGGATCTTTTCTTGGCCTCCTATaGTCTATTCTCCCCTGGACC +
Preference number: 2 (lower is better)
Translates to: KELMMHGSVPINHAVYGSFLGLL*SILPWT
Trigger: GGTCCAGGGGAGAATAGACCATAGGAGGCCAAGAAA...AGATCCATAAACAGCATGATTGATGGGTACAGAACCATGCATCATGAGCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR CAA 90 bp AATGGGATACCAGTTCCTATTCTCATAGGACTTCACTTACCTTTCTaGGCCTCCTATGGTCTATTCTCCCCTGGACCAACTTCAAAACCT +
Preference number: 2 (lower is better)
Translates to: NGIPVPILIGLHLPF*ASYGLFSPGPTSKP
Trigger: AGGTTTTGAAGTTGGTCCAGGGGAGAATAGACCATAGGAGGCCAAGAAAGGTAAGTGAAGTCCTATGAGAATAGGAACTGGTATCCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR-3UTR TCA 90 bp AAGGAGCTCATGATGCATGGTTCTGTACCCATCAATCATGCTGTTTATGGATCTCTCCTCCCTTCTCCCTaGAACATTTCCCTGATTAGA +
Preference number: 2 (lower is better)
Translates to: KELMMHGSVPINHAVYGSLLPSP*NISLIR
Trigger: TCTAATCAGGGAAATGTTTCAGGGAGAAGGGAGGAG...AGATCCATAAACAGCATGATTGATGGGTACAGAACCATGCATCATGAGCTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR-3UTR GCA 90 bp CATAAACTCCATTTTGTTAATGAGGGGCCTGACACAGAGGGCTTAGGAACTTGTTCTCTTAACTACTGCTaGCACCTGCTGGTTTTGTCA +
Preference number: 2 (lower is better)
Translates to: HKLHFVNEGPDTEGLGTCSLNYC*HLLVLS
Trigger: TGACAAAACCAGCAGGTGGCAGCAGTAGTTAAGAGA...ACAAGTTCCTAAGCCCTCTGTGTCAGGCCCCTCATTAACAAAATGGAGTTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
3UTR-3UTR CCA 90 bp CATAAACTCCATTTTGTTAATGAGGGGCCTGACACAGAGGGCTTAGGAACTTGTTACCCACTCCAACAGTaGCTGAGATCCATTTGCTAT +
Preference number: 2 (lower is better)
Translates to: HKLHFVNEGPDTEGLGTCYPLQQ*LRSICY
Trigger: ATAGCAAATGGATCTCAGCCACTGTTGGAGTGGGTA...ACAAGTTCCTAAGCCCTCTGTGTCAGGCCCCTCATTAACAAAATGGAGTTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
3UTR-3UTR TCA 90 bp AATAATTGTTTGGATGGGAAGGTGGTGAGCTTAGTAGCTCTTACATGGTGTTCTACTCTTTTCTCAGCATaGTCTCTCCGCTGTCCGATA +
Preference number: 2 (lower is better)
Translates to: NNCLDGKVVSLVALTWCSTLFSA*SLRCPI
Trigger: TATCGGACAGCGGAGAGATCATGCTGAGAAAAGAGT...AGAACACCATGTAAGAGCTACTAAGCTCACCACCTTCCCATCCAAACAATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
3UTR-3UTR TCA 90 bp ATGCATGGTTCTGTACCCATCAATCATGCTGTTTATGGATCTTTAAACTTATTGAGGTGTCTGGATCCCTaGAGCAGGCAAGGAACCCTT +
Preference number: 2 (lower is better)
Translates to: MHGSVPINHAVYGSLNLLRCLDP*SRQGTL
Trigger: AAGGGTTCCTTGCCTGCTTCAGGGATCCAGACACCT...CAATAAGTTTAAAGATCCATAAACAGCATGATTGATGGGTACAGAACCATGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR-3UTR GCA 90 bp AATAATTGTTTGGATGGGAAGGTGGTGAGCTTAGTAGCTCTTACATGGTGTTCTCGTTCTCTTAACTACTaGTGCCACCTGCTGGTTTTG +
Preference number: 2 (lower is better)
Translates to: NNCLDGKVVSLVALTWCSRSLNY*CHLLVL
Trigger: CAAAACCAGCAGGTGGCAGCAGTAGTTAAGAGAACG...AGAACACCATGTAAGAGCTACTAAGCTCACCACCTTCCCATCCAAACAATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
3UTR-3UTR CCA 90 bp CATCATAAGGAGCTCATGATGCATGGTTCTGTACCCATCAATCATGCTGTTTATTGGTCTATTCTCCCCTaGACCAACTTCAAAACCTCC +
Preference number: 2 (lower is better)
Translates to: HHKELMMHGSVPINHAVYWSILP*TNFKTS
Trigger: GGAGGTTTTGAAGTTGGTCCAGGGGAGAATAGACCA...ATAAACAGCATGATTGATGGGTACAGAACCATGCATCATGAGCTCCTTATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR-3UTR CCA 90 bp AAGGAGCTCATGATGCATGGTTCTGTACCCATCAATCATGCTGTTTATGGATCTAGAAGGATTAGAGCCTaGGTTCATGACAATGAGGCT +
Preference number: 2 (lower is better)
Translates to: KELMMHGSVPINHAVYGSRRIRA*VHDNEA
Trigger: AGCCTCATTGTCATGAACCCAGGCTCTAATCCTTCT...AGATCCATAAACAGCATGATTGATGGGTACAGAACCATGCATCATGAGCTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR-3UTR GCA 90 bp AATAATTGTTTGGATGGGAAGGTGGTGAGCTTAGTAGCTCTTACATGGTGTTCTTCTCTTAACTACTGCTaGCACCTGCTGGTTTTGTCA +
Preference number: 2 (lower is better)
Translates to: NNCLDGKVVSLVALTWCSSLNYC*HLLVLS
Trigger: TGACAAAACCAGCAGGTGGCAGCAGTAGTTAAGAGA...AGAACACCATGTAAGAGCTACTAAGCTCACCACCTTCCCATCCAAACAATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
3UTR-3UTR CCA 90 bp AATAATTGTTTGGATGGGAAGGTGGTGAGCTTAGTAGCTCTTACATGGTGTTCTTACCCACTCCAACAGTaGCTGAGATCCATTTGCTAT +
Preference number: 2 (lower is better)
Translates to: NNCLDGKVVSLVALTWCSYPLQQ*LRSICY
Trigger: ATAGCAAATGGATCTCAGCCACTGTTGGAGTGGGTA...AGAACACCATGTAAGAGCTACTAAGCTCACCACCTTCCCATCCAAACAATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
3UTR-3UTR CCA 90 bp CATCATAAGGAGCTCATGATGCATGGTTCTGTACCCATCAATCATGCTGTTTATTTTGTTCCATTGTTTTaGAGGATGGTTGGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: HHKELMMHGSVPINHAVYFVPLF*RMVGQE
Trigger: CTCCTGCCCAACCATCCTCCAAAACAATGGAACAAA...ATAAACAGCATGATTGATGGGTACAGAACCATGCATCATGAGCTCCTTATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR-3UTR CCA 90 bp AAATATCTTTGGAATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCATGCAGCTATAAATCCTaGACCAGCAGTGATTATTGG +
Preference number: 2 (lower is better)
Translates to: KYLWNLIPLEGKALPPRPCSYKS*TSSDYW
Trigger: CCAATAATCACTGCTGGTCCAGGATTTATAGCTGCA...TGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATTCCAAAGATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511532.5
3UTR CAA 90 bp AGGTGCAGTCTTCTGTGCCTATCTAGAGGTTTCTCAGGGACAAAATaGCACATAAGCAAGCCAAAAATCTGTTATGCTTACATTGTTCTC +
Preference number: 2 (lower is better)
Translates to: RCSLLCLSRGFSGTK*HISKPKICYAYIVL
Trigger: GAGAACAATGTAAGCATAACAGATTTTTGGCTTGCTTATGTGCAATTTTGTCCCTGAGAAACCTCTAGATAGGCACAGAAGACTGCACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR-3UTR TCA 90 bp ATTTTAATTGAAAAACACCAGAAGTTTGCTCCTGGAAGTGAGCATCCAAAGGGTGAGCTGGTCGATATTTaGAGATTGTACGTGTGTCTG +
Preference number: 2 (lower is better)
Translates to: ILIEKHQKFAPGSEHPKGELVDI*RLYVCL
Trigger: CAGACACACGTACAATCTTCAAATATCGACCAGCTC...ACCCTTTGGATGCTCACTTCCAGGAGCAAACTTCTGGTGTTTTTCAATTAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR-3UTR GCA 90 bp CTCCTGCATAGCAAAGTAATAAACAGTACTATCAGGTGGGAATGGGTAAAATTTCGTTCTCTTAACTACTaGTGCCACCTGCTGGTTTTG +
Preference number: 2 (lower is better)
Translates to: LLHSKVINSTIRWEWVKFRSLNY*CHLLVL
Trigger: CAAAACCAGCAGGTGGCAGCAGTAGTTAAGAGAACG...AAATTTTACCCATTCCCACCTGATAGTACTGTTTATTACTTTGCTATGCAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
3UTR-3UTR GCA 90 bp AAGGAGCTCATGATGCATGGTTCTGTACCCATCAATCATGCTGTTTATGGATCTATAAATAAACCCGTGTaGTTGCTGAGAAGCTCAACT +
Preference number: 2 (lower is better)
Translates to: KELMMHGSVPINHAVYGSINKPV*LLRSST
Trigger: AGTTGAGCTTCTCAGCAAGCACACGGGTTTATTTAT...AGATCCATAAACAGCATGATTGATGGGTACAGAACCATGCATCATGAGCTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR-3UTR GCA 90 bp TGTTCTTCGGGTAGTTCCCATTCTTGTCCTAACTCCAGAGGAAAAGAGAAGAAACTTTATTCATCTAGGTaGAGTCTTCTGTGCCTATCT +
Preference number: 2 (lower is better)
Translates to: CSSGSSHSCPNSRGKEKKLYSSR*SLLCLS
Trigger: AGATAGGCACAGAAGACTGCACCTAGATGAATAAAG...TTTCTTCTCTTTTCCTCTGGAGTTAGGACAAGAATGGGAACTACCCGAAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR-3UTR CCA 90 bp AATAATTGTTTGGATGGGAAGGTGGTGAGCTTAGTAGCTCTTACATGGTGTTCTACCAGCAGTGATTATTaGAAAACTGACCACAGCACT +
Preference number: 2 (lower is better)
Translates to: NNCLDGKVVSLVALTWCSTSSDY*KTDHST
Trigger: AGTGCTGTGGTCAGTTTTCCAATAATCACTGCTGGT...AGAACACCATGTAAGAGCTACTAAGCTCACCACCTTCCCATCCAAACAATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511532.5
3UTR-3UTR CCA 90 bp CTGAAAACAGCAGAGCTGGTAATATTTGCCCAGGATCACAAAGCTAATTGTGGAGACTTTCAGACAAACTaGTATGAGCACTGTCAAATG +
Preference number: 2 (lower is better)
Translates to: LKTAELVIFAQDHKANCGDFQTN*YEHCQM
Trigger: CATTTGACAGTGCTCATACCAGTTTGTCTGAAAGTC...TCCACAATTAGCTTTGTGATCCTGGGCAAATATTACCAGCTCTGCTGTTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR-3UTR TCA 90 bp CATCATAAGGAGCTCATGATGCATGGTTCTGTACCCATCAATCATGCTGTTTATTGCGGAAATATTGATTaGTTGCTACATAGACCTACC +
Preference number: 2 (lower is better)
Translates to: HHKELMMHGSVPINHAVYCGNID*LLHRPT
Trigger: GGTAGGTCTATGTAGCAATCAATCAATATTTCCGCA...ATAAACAGCATGATTGATGGGTACAGAACCATGCATCATGAGCTCCTTATGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR-3UTR TCA 90 bp CTGAAAACAGCAGAGCTGGTAATATTTGCCCAGGATCACAAAGCTAATTGTGGATCCCTAACTTTACCATaGAACAACCTTAATGGTTCT +
Preference number: 2 (lower is better)
Translates to: LKTAELVIFAQDHKANCGSLTLP*NNLNGS
Trigger: AGAACCATTAAGGTTGTTTCATGGTAAAGTTAGGGA...TCCACAATTAGCTTTGTGATCCTGGGCAAATATTACCAGCTCTGCTGTTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR-3UTR GCA 90 bp AAATATCTTTGGAATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCATGGCTGAGATCCATTTaGTATATGAAAATGCACTCT +
Preference number: 2 (lower is better)
Translates to: KYLWNLIPLEGKALPPRPWLRSI*YMKMHS
Trigger: AGAGTGCATTTTCATATAGCAAATGGATCTCAGCCA...TGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATTCCAAAGATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
3UTR-3UTR CCA 90 bp CATAAACTCCATTTTGTTAATGAGGGGCCTGACACAGAGGGCTTAGGAACTTGTCAACAAACATTGTACTaGCAGTTCTGTTTCAGTTTT +
Preference number: 2 (lower is better)
Translates to: HKLHFVNEGPDTEGLGTCQQTLY*QFCFSF
Trigger: AAAACTGAAACAGAACTGCCAGTACAATGTTTGTTG...ACAAGTTCCTAAGCCCTCTGTGTCAGGCCCCTCATTAACAAAATGGAGTTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
3UTR-3UTR TCA 90 bp CTCCTGCATAGCAAAGTAATAAACAGTACTATCAGGTGGGAATGGGTAAAATTTGCTAAAATGGGTAGATaGTGTAGAGTTGGGCGATAT +
Preference number: 2 (lower is better)
Translates to: LLHSKVINSTIRWEWVKFAKMGR*CRVGRY
Trigger: ATATCGCCCAACTCTACATCATCTACCCATTTTAGC...AAATTTTACCCATTCCCACCTGATAGTACTGTTTATTACTTTGCTATGCAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
3UTR-3UTR TCA 90 bp ATTTTAATTGAAAAACACCAGAAGTTTGCTCCTGGAAGTGAGCATCCAAAGGGTATGGTTCTCCTATTCTaGCTTTCAGACAAACTGGTA +
Preference number: 2 (lower is better)
Translates to: ILIEKHQKFAPGSEHPKGMVLLF*LSDKLV
Trigger: TACCAGTTTGTCTGAAAGTCAGAATAGGAGAACCAT...ACCCTTTGGATGCTCACTTCCAGGAGCAAACTTCTGGTGTTTTTCAATTAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR-3UTR GCA 90 bp CTCCTGCATAGCAAAGTAATAAACAGTACTATCAGGTGGGAATGGGTAAAATTTACTCAGAGAGTGATTTaGTATGAACCAACAGCAGGT +
Preference number: 2 (lower is better)
Translates to: LLHSKVINSTIRWEWVKFTQRVI*YEPTAG
Trigger: ACCTGCTGTTGGTTCATAGCAAATCACTCTCTGAGT...AAATTTTACCCATTCCCACCTGATAGTACTGTTTATTACTTTGCTATGCAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511532.5
3UTR-3UTR GCA 90 bp GGAAGTAATTCCCAACATGTGTTCACCATAAATCTCAATTCCTTCTCCTGGCTTGATTGTACGTGTGTCTaGGTGCATTATGTGTATTAT +
Preference number: 2 (lower is better)
Translates to: GSNSQHVFTINLNSFSWLDCTCV*VHYVYY
Trigger: ATAATACACATAATGCACGCAGACACACGTACAATC...AAGCCAGGAGAAGGAATTGAGATTTATGGTGAACACATGTTGGGAATTACTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR-3UTR TCA 90 bp CTCCTGCATAGCAAAGTAATAAACAGTACTATCAGGTGGGAATGGGTAAAATTTTTAACCCATGCACATTaGCTTCAGAGTATACACACA +
Preference number: 2 (lower is better)
Translates to: LLHSKVINSTIRWEWVKFLTHAH*LQSIHT
Trigger: TGTGTGTATACTCTGAAGTCAATGTGCATGGGTTAA...AAATTTTACCCATTCCCACCTGATAGTACTGTTTATTACTTTGCTATGCAGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
3UTR CAA 90 bp ATAAATAAACCCGTGTGCTTGCTGAGAAGCTCAACTGCGGAAATATaGATTGATTGCTACATAGACCTACCCATAATAAATAAGCTAAGA +
Preference number: 2 (lower is better)
Translates to: INKPVCLLRSSTAEI*IDCYIDLPIINKLR
Trigger: TCTTAGCTTATTTATTATGGGTAGGTCTATGTAGCAATCAATCAATATTTCCGCAGTTGAGCTTCTCAGCAAGCACACGGGTTTATTTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR CAA 90 bp TCACCTAGTAGAGATCTGTTAATCAAAATAAATAAACCCGTGTGCTaGCTGAGAAGCTCAACTGCGGAAATATTGATTGATTGCTACATA +
Preference number: 2 (lower is better)
Translates to: SPSRDLLIKINKPVC*LRSSTAEILIDCYI
Trigger: TATGTAGCAATCAATCAATATTTCCGCAGTTGAGCTTCTCAGCAAGCACACGGGTTTATTTATTTTGATTAACAGATCTCTACTAGGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR-3UTR GCA 90 bp AACTGCTGTCAGGTGATAAATACTACCAAGGAAGTAATTCCCAACATGTGTTCACACTATGCAAAATCATaGAGTAAAAACTACAGAGCA +
Preference number: 2 (lower is better)
Translates to: NCCQVINTTKEVIPNMCSHYAKS*SKNYRA
Trigger: TGCTCTGTAGTTTTTACTGCATGATTTTGCATAGTG...TGAACACATGTTGGGAATTACTTCCTTGGTAGTATTTATCACCTGACAGCAGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR-3UTR CCA 90 bp CTCCTGCATAGCAAAGTAATAAACAGTACTATCAGGTGGGAATGGGTAAAATTTCATTATGAGCTAAAATaGGTAGATGATGTAGAGTTG +
Preference number: 2 (lower is better)
Translates to: LLHSKVINSTIRWEWVKFHYELK*VDDVEL
Trigger: CAACTCTACATCATCTACCCATTTTAGCTCATAATG...AAATTTTACCCATTCCCACCTGATAGTACTGTTTATTACTTTGCTATGCAGGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
3UTR CCA 72 bp TCCATTGTTTTGGAGGATGGTTGGGCAGGAGGTGTCTaGATCCCTGAAGCAGGCAAGGAACCCTTTCCCAAA +
Preference number: 3 (lower is better)
Translates to: SIVLEDGWAGGV*IPEAGKEPFPK
Trigger: TTTGGGAAAGGGTTCCTTGCCTGCTTCAGGGATCCAGACACCTCCTGCCCAACCATCCTCCAAAACAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR TCA 72 bp GGGTTGCAGCTTACGAGTTACTGTGAAGGTATTGGGTaGGGAGTTGGGACAGGAGATGTGGTTGGGTGGAAT +
Preference number: 3 (lower is better)
Translates to: GLQLTSYCEGIG*GVGTGDVVGWN
Trigger: ATTCCACCCAACCACATCTCCTGTCCCAACTCCTCACCCAATACCTTCACAGTAACTCGTAAGCTGCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR TCA 72 bp GTGAGCATCCAAAGGGTTGCAGCTTACGAGTTACTGTaGAGGTATTGGGTGAGGAGTTGGGACAGGAGATGT +
Preference number: 3 (lower is better)
Translates to: VSIQRVAAYELL*RYWVRSWDRRC
Trigger: ACATCTCCTGTCCCAACTCCTCACCCAATACCTTCACAGTAACTCGTAAGCTGCAACCCTTTGGATGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR-3UTR CAA 90 bp CACCAGAAGTTTGCTCCTGGAAGTGAGCATCCAAAGGGTTGCAGCTTACGAGTTGGACAGGAGATGTGGTaGGGTGGAATACATCATAAC +
Preference number: 3 (lower is better)
Translates to: HQKFAPGSEHPKGCSLRVGQEMW*GGIHHN
Trigger: GTTATGATGTATTCCACCCAACCACATCTCCTGTCC...AACTCGTAAGCTGCAACCCTTTGGATGCTCACTTCCAGGAGCAAACTTCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR GCA 72 bp CAGAAGTTTGCTCCTGGAAGTGAGCATCCAAAGGGTTaGAGCTTACGAGTTACTGTGAAGGTATTGGGTGAG +
Preference number: 3 (lower is better)
Translates to: QKFAPGSEHPKG*SLRVTVKVLGE
Trigger: CTCACCCAATACCTTCACAGTAACTCGTAAGCTGCAACCCTTTGGATGCTCACTTCCAGGAGCAAACTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR CCA 72 bp TCTCATAGGACTTCACTTACCTTTCTTGGCCTCCTATaGTCTATTCTCCCCTGGACCAACTTCAAAACCTCC +
Preference number: 3 (lower is better)
Translates to: SHRTSLTFLGLL*SILPWTNFKTS
Trigger: GGAGGTTTTGAAGTTGGTCCAGGGGAGAATAGACCATAGGAGGCCAAGAAAGGTAAGTGAAGTCCTATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR-3UTR CAA 90 bp AATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCGTGGCTGAGATCCATTaGCTATATGAAAATGCACTC +
Preference number: 3 (lower is better)
Translates to: NLIPLEGKALPPRPRYFCVAEIH*LYENAL
Trigger: GAGTGCATTTTCATATAGCAAATGGATCTCAGCCAC...GCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
3UTR TCA 72 bp GTGATTATTGGAAAACTGACCACAGCACTCAGAGAGTaGTTTGCTATGAACCAACAGCAGGTAGCTATAGCC +
Preference number: 3 (lower is better)
Translates to: VIIGKLTTALRE*FAMNQQQVAIA
Trigger: GGCTATAGCTACCTGCTGTTGGTTCATAGCAAATCACTCTCTGAGTGCTGTGGTCAGTTTTCCAATAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511532.5
3UTR GCA 72 bp TATTGGAAAACTGACCACAGCACTCAGAGAGTGATTTaGTATGAACCAACAGCAGGTAGCTATAGCCCAAAG +
Preference number: 3 (lower is better)
Translates to: YWKTDHSTQRVI*YEPTAGSYSPK
Trigger: CTTTGGGCTATAGCTACCTGCTGTTGGTTCATAGCAAATCACTCTCTGAGTGCTGTGGTCAGTTTTCCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511532.5
3UTR-3UTR CAA 90 bp CTCCTGCATAGCAAAGTAATAAACAGTACTATCAGGTGGGAATGGGTAAAATTTTGGGACCTTGCTATGTaGCCTAGGCTGGCAGATTTG +
Preference number: 3 (lower is better)
Translates to: LLHSKVINSTIRWEWVKFWDLAM*PRLADL
Trigger: CAAATCTGCCAGCCTAGGCAACATAGCAAGGTCCCA...AAATTTTACCCATTCCCACCTGATAGTACTGTTTATTACTTTGCTATGCAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
3UTR-3UTR CAA 90 bp AAATATCTTTGGAATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAGTGGCTGAGATCCATTaGCTATATGAAAATGCACTC +
Preference number: 3 (lower is better)
Translates to: KYLWNLIPLEGKALPPRPVAEIH*LYENAL
Trigger: GAGTGCATTTTCATATAGCAAATGGATCTCAGCCAC...TGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATTCCAAAGATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
3UTR-3UTR CAA 90 bp AATAATTGTTTGGATGGGAAGGTGGTGAGCTTAGTAGCTCTTACATGGTGTTCTGCCTGTCATTTTATTTaGCCTACTGGAAACCACCAG +
Preference number: 3 (lower is better)
Translates to: NNCLDGKVVSLVALTWCSACHFI*PTGNHQ
Trigger: CTGGTGGTTTCCAGTAGGCAAAATAAAATGACAGGC...AGAACACCATGTAAGAGCTACTAAGCTCACCACCTTCCCATCCAAACAATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
3UTR-3UTR CAA 90 bp GCGCTTTATCAGGTCCCTTTTAAAAGTTGCTCCTGTTTCATTCAGATTTACTATAATAAACCCGTGTGCTaGCTGAGAAGCTCAACTGCG +
Preference number: 3 (lower is better)
Translates to: ALYQVPFKSCSCFIQIYYNKPVC*LRSSTA
Trigger: CGCAGTTGAGCTTCTCAGCAAGCACACGGGTTTATT...ATAGTAAATCTGAATGAAACAGGAGCAACTTTTAAAAGGGACCTGATAAAGCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR GCA 72 bp ATCACACATCTTTATTCATCTAGGTGCAGTCTTCTGTaGCTATCTAGAGGTTTCTCAGGGACAAAATTGCAC +
Preference number: 3 (lower is better)
Translates to: ITHLYSSRCSLL*LSRGFSGTKLH
Trigger: GTGCAATTTTGTCCCTGAGAAACCTCTAGATAGGCACAGAAGACTGCACCTAGATGAATAAAGATGTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR-3UTR CAA 90 bp TTAGAGCCTGGGTTCATGACAATGAGGCTTTGCCCTGAAGTCACTTTTGTATATTCAACTGCGGAAATATaGATTGATTGCTACATAGAC +
Preference number: 3 (lower is better)
Translates to: LEPGFMTMRLCPEVTFVYSTAEI*IDCYID
Trigger: GTCTATGTAGCAATCAATCAATATTTCCGCAGTTGA...ATATACAAAAGTGACTTCAGGGCAAAGCCTCATTGTCATGAACCCAGGCTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR TCA 72 bp TTGGCAATAACGGTTTCTTTCATCATAAGGAGCTCATaGTGCATGGTTCTGTACCCATCAATCATGCTGTTT +
Preference number: 3 (lower is better)
Translates to: LAITVSFIIRSS*CMVLYPSIMLF
Trigger: AAACAGCATGATTGATGGGTACAGAACCATGCATCATGAGCTCCTTATGATGAAAGAAACCGTTATTGCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR TCA 72 bp AGAGATTTCCTGACTGTACCCTCCCTAACTTTACCATaGAACAACCTTAATGGTTCTCCTATTCTGACTTTC +
Preference number: 3 (lower is better)
Translates to: RDFLTVPSLTLP*NNLNGSPILTF
Trigger: GAAAGTCAGAATAGGAGAACCATTAAGGTTGTTTCATGGTAAAGTTAGGGAGGGTACAGTCAGGAAATCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR GCA 72 bp ACCCTTTATTTCCTTAAACATGAAGATACCCCACATTaGAGCTATAAATCCTGGACCAGCAGTGATTATTGG +
Preference number: 3 (lower is better)
Translates to: TLYFLKHEDTPH*SYKSWTSSDYW
Trigger: CCAATAATCACTGCTGGTCCAGGATTTATAGCTGCAATGTGGGGTATCTTCATGTTTAAGGAAATAAAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511532.5
3UTR GCA 72 bp GGGAGCTGGTCGATATTTGAAGATTGTACGTGTGTCTaGGTGCATTATGTGTATTATCACACATCTTTATTC +
Preference number: 3 (lower is better)
Translates to: GSWSIFEDCTCV*VHYVYYHTSLF
Trigger: GAATAAAGATGTGTGATAATACACATAATGCACGCAGACACACGTACAATCTTCAAATATCGACCAGCTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR GCA 72 bp ATTATGTGTATTATCACACATCTTTATTCATCTAGGTaGAGTCTTCTGTGCCTATCTAGAGGTTTCTCAGGG +
Preference number: 3 (lower is better)
Translates to: IMCIITHLYSSR*SLLCLSRGFSG
Trigger: CCCTGAGAAACCTCTAGATAGGCACAGAAGACTGCACCTAGATGAATAAAGATGTGTGATAATACACATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR GCA 72 bp GCTGGTCGATATTTGAAGATTGTACGTGTGTCTGCGTaGATTATGTGTATTATCACACATCTTTATTCATCT +
Preference number: 3 (lower is better)
Translates to: AGRYLKIVRVSA*IMCIITHLYSS
Trigger: AGATGAATAAAGATGTGTGATAATACACATAATGCACGCAGACACACGTACAATCTTCAAATATCGACCAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR-3UTR CAA 90 bp CTCCTGCATAGCAAAGTAATAAACAGTACTATCAGGTGGGAATGGGTAAAATTTTGGACTGTAACTTCTTaGTATATGGACTCTATACTG +
Preference number: 3 (lower is better)
Translates to: LLHSKVINSTIRWEWVKFWTVTS*YMDSIL
Trigger: CAGTATAGAGTCCATATACAAAGAAGTTACAGTCCA...AAATTTTACCCATTCCCACCTGATAGTACTGTTTATTACTTTGCTATGCAGGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
3UTR TCA 72 bp AAAATGAAGCAGAGGTGGGATTTAACCCATGCACATTaGCTTCAGAGTATACACACAAATAAAAAGCTGTTT +
Preference number: 3 (lower is better)
Translates to: KMKQRWDLTHAH*LQSIHTNKKLF
Trigger: AAACAGCTTTTTATTTGTGTGTATACTCTGAAGTCAATGTGCATGGGTTAAATCCCACCTCTGCTTCATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
3UTR TCA 72 bp GTTGCTCCTGTTTCATTCAGATTTACTATTCCAGACTaGTTTAGATTCTTCAAGATCAAAACAGTGACTCCT +
Preference number: 3 (lower is better)
Translates to: VAPVSFRFTIPD*FRFFKIKTVTP
Trigger: AGGAGTCACTGTTTTGATCTTGAAGAATCTAAATCAGTCTGGAATAGTAAATCTGAATGAAACAGGAGCAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR GCA 72 bp TTGCTGAGAAGCTCAACTGCGGAAATATTGATTGATTaGTACATAGACCTACCCATAATAAATAAGCTAAGA +
Preference number: 3 (lower is better)
Translates to: LLRSSTAEILID*YIDLPIINKLR
Trigger: TCTTAGCTTATTTATTATGGGTAGGTCTATGTAGCAATCAATCAATATTTCCGCAGTTGAGCTTCTCAGCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR TCA 90 bp CCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCCTCACTTCATTCCGGGCTGGCGGCTaGAGCTCCTTCCTACTCAGC +
Preference number: 4 (lower is better)
Translates to: PLEGKALPPRPRYFCLTSFRAGG*SSFLLS
Trigger: GCTGAGTAGGAAGGAGCTTCAGCCGCCAGCCCGGAA...TGAAGTGAGGCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296529.11
CDS-3UTR GCA 90 bp CACCAGAAGTTTGCTCCTGGAAGTGAGCATCCAAAGGGTTGCAGCTTACGAGTTGATCCGCCCACTACGTaGCAGTGTGGAGCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: HQKFAPGSEHPKGCSLRVDPPTT*QCGAGA
Trigger: GGCTCCGGCTCCACACTGGCACGTAGTGGGCGGATC...AACTCGTAAGCTGCAACCCTTTGGATGCTCACTTCCAGGAGCAAACTTCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR CCA 90 bp CCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCCTCACTTCACACTACGTGCCAGTGTaGAGCCGGAGCCTGACTCAT +
Preference number: 4 (lower is better)
Translates to: PLEGKALPPRPRYFCLTSHYVPV*SRSLTH
Trigger: ATGAGTCAGGCTCCGGCTCCACACTGGCACGTAGTG...TGAAGTGAGGCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296529.11
CDS-3UTR CCA 90 bp CTTACCTTTCTTGGCCTCCTATGGTCTATTCTCCCCTGGACCAACTTCAAAACCGGGGGTGAGGAGCGCTaGATTCAGAGGGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LTFLGLLWSILPWTNFKTGGEER*IQRAAG
Trigger: TCCAGCTGCCCTCTGAATCCAGCGCTCCTCACCCCC...GGTTTTGAAGTTGGTCCAGGGGAGAATAGACCATAGGAGGCCAAGAAAGGTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp GACTTCACTTACCTTTCTTGGCCTCCTATGGTCTATTCTCCCCTGGACCAACTTCACTGCGTTCCGGGCTaGCGGCTGAAGCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: DFTYLSWPPMVYSPLDQLHCVPG*RLKLLP
Trigger: AGGAAGGAGCTTCAGCCGCCAGCCCGGAACGCAGTG...AAGTTGGTCCAGGGGAGAATAGACCATAGGAGGCCAAGAAAGGTAAGTGAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp CACCAGAAGTTTGCTCCTGGAAGTGAGCATCCAAAGGGTTGCAGCTTACGAGTTCACTACGTGCCAGTGTaGAGCCGGAGCCTGACTCAT +
Preference number: 4 (lower is better)
Translates to: HQKFAPGSEHPKGCSLRVHYVPV*SRSLTH
Trigger: ATGAGTCAGGCTCCGGCTCCACACTGGCACGTAGTG...AACTCGTAAGCTGCAACCCTTTGGATGCTCACTTCCAGGAGCAAACTTCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR TCA 90 bp AATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCGGCTCAAGGGTCAGCTaGGGCAGGTGCTTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: NLIPLEGKALPPRPRYFCGSRVS*GRCLLL
Trigger: TAGCAGCAAGCACCTGCCTCAGCTGACCCTTGAGCC...GCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR GCA 90 bp TTAGAGCCTGGGTTCATGACAATGAGGCTTTGCCCTGAAGTCACTTTTGTATATGATCCGCCCACTACGTaGCAGTGTGGAGCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: LEPGFMTMRLCPEVTFVYDPPTT*QCGAGA
Trigger: GGCTCCGGCTCCACACTGGCACGTAGTGGGCGGATC...ATATACAAAAGTGACTTCAGGGCAAAGCCTCATTGTCATGAACCCAGGCTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp CCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCCTCACTTCAGGAGCTTATGGGTTATaGCTCAAGGGTCAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PLEGKALPPRPRYFCLTSGAYGL*LKGQLR
Trigger: CCTCAGCTGACCCTTGAGCCATAACCCATAAGCTCC...TGAAGTGAGGCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp CTCAGCATGATCTCTCCGCTGTCCGATAGACGCGTTCTCTTAACTACTGCTGCCCAGGAACAGGGGTCTTaGGTTGTGTTGATCACATGC +
Preference number: 4 (lower is better)
Translates to: LSMISPLSDRRVLLTTAAQEQGS*VVLITC
Trigger: GCATGTGATCAACACAACCCAAGACCCCTGTTCCTG...GGCAGCAGTAGTTAAGAGAACGCGTCTATCGGACAGCGGAGAGATCATGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296529.11
CDS-3UTR GCA 90 bp CTCAGCATGATCTCTCCGCTGTCCGATAGACGCGTTCTCTTAACTACTGCTGCCTACTCCAGATATCACTaGAAGACTGCAGCCCATGCT +
Preference number: 4 (lower is better)
Translates to: LSMISPLSDRRVLLTTAAYSRYH*KTAAHA
Trigger: AGCATGGGCTGCAGTCTTGCAGTGATATCTGGAGTA...GGCAGCAGTAGTTAAGAGAACGCGTCTATCGGACAGCGGAGAGATCATGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511532.5
CDS-3UTR GCA 90 bp TTAGAGCCTGGGTTCATGACAATGAGGCTTTGCCCTGAAGTCACTTTTGTATATAGTGGCTGTACTCACTaGGTTCCGGGCTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LEPGFMTMRLCPEVTFVYSGCTH*VPGWRL
Trigger: CAGCCGCCAGCCCGGAACGCAGTGAGTACAGCCACT...ATATACAAAAGTGACTTCAGGGCAAAGCCTCATTGTCATGAACCCAGGCTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR CAA 72 bp CCAAAGGGTTGCAGCTTACGAGTTACTGTGAAGGTATaGGGTGAGGAGTTGGGACAGGAGATGTGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: PKGCSLRVTVKV*GEELGQEMWLG
Trigger: ACCCAACCACATCTCCTGTCCCAACTCCTCACCCAATACCTTCACAGTAACTCGTAAGCTGCAACCCTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR TCA 90 bp GGAAGTAATTCCCAACATGTGTTCACCATAAATCTCAATTCCTTCTCCTGGCTTTTCCGGGCTGGCGGCTaGAGCTCCTTCCTACTCAGC +
Preference number: 4 (lower is better)
Translates to: GSNSQHVFTINLNSFSWLFRAGG*SSFLLS
Trigger: GCTGAGTAGGAAGGAGCTTCAGCCGCCAGCCCGGAA...AAGCCAGGAGAAGGAATTGAGATTTATGGTGAACACATGTTGGGAATTACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR TCA 90 bp CTCAGCATGATCTCTCCGCTGTCCGATAGACGCGTTCTCTTAACTACTGCTGCCACAGCACTCAGAGAGTaGTTTGCTATGAACCAACAG +
Preference number: 4 (lower is better)
Translates to: LSMISPLSDRRVLLTTAATALRE*FAMNQQ
Trigger: CTGTTGGTTCATAGCAAATCACTCTCTGAGTGCTGT...GGCAGCAGTAGTTAAGAGAACGCGTCTATCGGACAGCGGAGAGATCATGCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR TCA 90 bp GACTTCACTTACCTTTCTTGGCCTCCTATGGTCTATTCTCCCCTGGACCAACTTAACCCGTGTGCTTGCTaGGAAGCTCAACTGCGGAAA +
Preference number: 4 (lower is better)
Translates to: DFTYLSWPPMVYSPLDQLNPCAC*EAQLRK
Trigger: TTTCCGCAGTTGAGCTTCTCAGCAAGCACACGGGTT...AAGTTGGTCCAGGGGAGAATAGACCATAGGAGGCCAAGAAAGGTAAGTGAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR TCA 90 bp TTAGAGCCTGGGTTCATGACAATGAGGCTTTGCCCTGAAGTCACTTTTGTATATATACCCCACTGGGGGTaGGGAGCGCTGGATTCAGAG +
Preference number: 4 (lower is better)
Translates to: LEPGFMTMRLCPEVTFVYIPHWG*GALDSE
Trigger: CTCTGAATCCAGCGCTCCTCACCCCCAGTGGGGTAT...ATATACAAAAGTGACTTCAGGGCAAAGCCTCATTGTCATGAACCCAGGCTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR GCA 90 bp CTCAGCATGATCTCTCCGCTGTCCGATAGACGCGTTCTCTTAACTACTGCTGCCGCAACAGGTCAGAGATaGAGGAAGTGTCTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: LSMISPLSDRRVLLTTAAATGQR*RKCLEK
Trigger: CTTTTCAAGACACTTCCTGCATCTCTGACCTGTTGC...GGCAGCAGTAGTTAAGAGAACGCGTCTATCGGACAGCGGAGAGATCATGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR GCA 90 bp GACTTCACTTACCTTTCTTGGCCTCCTATGGTCTATTCTCCCCTGGACCAACTTTCCCTGTTGCCCAAATaGAGCCCCCAAGCATTGCAA +
Preference number: 4 (lower is better)
Translates to: DFTYLSWPPMVYSPLDQLSLLPK*SPQALQ
Trigger: TTGCAATGCTTGGGGGCTGCATTTGGGCAACAGGGA...AAGTTGGTCCAGGGGAGAATAGACCATAGGAGGCCAAGAAAGGTAAGTGAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR GCA 90 bp CTCAGCATGATCTCTCCGCTGTCCGATAGACGCGTTCTCTTAACTACTGCTGCCTCTCTTAACTACTGCTaGCACCTGCTGGTTTTGTCA +
Preference number: 4 (lower is better)
Translates to: LSMISPLSDRRVLLTTAASLNYC*HLLVLS
Trigger: TGACAAAACCAGCAGGTGGCAGCAGTAGTTAAGAGA...GGCAGCAGTAGTTAAGAGAACGCGTCTATCGGACAGCGGAGAGATCATGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp CTCAGCATGATCTCTCCGCTGTCCGATAGACGCGTTCTCTTAACTACTGCTGCCCTTTTCAGGAGCTTATaGGTTATGGCTCAAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LSMISPLSDRRVLLTTAALFRSL*VMAQGS
Trigger: TGACCCTTGAGCCATAACCCATAAGCTCCTGAAAAG...GGCAGCAGTAGTTAAGAGAACGCGTCTATCGGACAGCGGAGAGATCATGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp CATAAACTCCATTTTGTTAATGAGGGGCCTGACACAGAGGGCTTAGGAACTTGTAGCCGCCCCAGCAGCTaGGATTATAGTAGTGCGCCA +
Preference number: 4 (lower is better)
Translates to: HKLHFVNEGPDTEGLGTCSRPSS*DYSSAP
Trigger: TGGCGCACTACTATAATCCCAGCTGCTGGGGCGGCT...ACAAGTTCCTAAGCCCTCTGTGTCAGGCCCCTCATTAACAAAATGGAGTTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR TCA 90 bp TCACACATCTTTATTCATCTAGGTGCAGTCTTCTGTGCCTATCTAGAGGTTTCTGGCTCAAGGGTCAGCTaGGGCAGGTGCTTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: SHIFIHLGAVFCAYLEVSGSRVS*GRCLLL
Trigger: TAGCAGCAAGCACCTGCCTCAGCTGACCCTTGAGCC...AGAAACCTCTAGATAGGCACAGAAGACTGCACCTAGATGAATAAAGATGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR TCA 90 bp GGATTAGAGCCTGGGTTCATGACAATGAGGCTTTGCCCTGAAGTCACTTTTGTAGACTTGGCTTTCCTTTaGGTGGCTGTACTCACTGCG +
Preference number: 4 (lower is better)
Translates to: GLEPGFMTMRLCPEVTFVDLAFL*VAVLTA
Trigger: CGCAGTGAGTACAGCCACTCAAAGGAAAGCCAAGTC...TACAAAAGTGACTTCAGGGCAAAGCCTCATTGTCATGAACCCAGGCTCTAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR GCA 90 bp CTCCTGCATAGCAAAGTAATAAACAGTACTATCAGGTGGGAATGGGTAAAATTTGATCCGCCCACTACGTaGCAGTGTGGAGCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: LLHSKVINSTIRWEWVKFDPPTT*QCGAGA
Trigger: GGCTCCGGCTCCACACTGGCACGTAGTGGGCGGATC...AAATTTTACCCATTCCCACCTGATAGTACTGTTTATTACTTTGCTATGCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296529.11
CDS-3UTR GCA 90 bp AATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCTCCCTGTTGCCCAAATaGAGCCCCCAAGCATTGCAA +
Preference number: 4 (lower is better)
Translates to: NLIPLEGKALPPRPRYFCSLLPK*SPQALQ
Trigger: TTGCAATGCTTGGGGGCTGCATTTGGGCAACAGGGA...GCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR GCA 90 bp CCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCCTCACTTCATACTCCAGATATCACTaGAAGACTGCAGCCCACTAT +
Preference number: 4 (lower is better)
Translates to: PLEGKALPPRPRYFCLTSYSRYH*KTAAHY
Trigger: ATAGTGGGCTGCAGTCTTGCAGTGATATCTGGAGTA...TGAAGTGAGGCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296529.11
CDS-3UTR GCA 90 bp CCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCCTCACTTCAGAAGATACCCCACATTaGAGCTATAAATCCTGGACC +
Preference number: 4 (lower is better)
Translates to: PLEGKALPPRPRYFCLTSEDTPH*SYKSWT
Trigger: GGTCCAGGATTTATAGCTGCAATGTGGGGTATCTTC...TGAAGTGAGGCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp TTAGAGCCTGGGTTCATGACAATGAGGCTTTGCCCTGAAGTCACTTTTGTATATCACTACGTGCCAGTGTaGAGCCGGAGCCTGACTCAT +
Preference number: 4 (lower is better)
Translates to: LEPGFMTMRLCPEVTFVYHYVPV*SRSLTH
Trigger: ATGAGTCAGGCTCCGGCTCCACACTGGCACGTAGTG...ATATACAAAAGTGACTTCAGGGCAAAGCCTCATTGTCATGAACCCAGGCTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp CCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCCTCACTTCATACCCACTCCAACAGTaGCTGAGATCCATTTGCTAT +
Preference number: 4 (lower is better)
Translates to: PLEGKALPPRPRYFCLTSYPLQQ*LRSICY
Trigger: ATAGCAAATGGATCTCAGCCACTGTTGGAGTGGGTA...TGAAGTGAGGCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp CATCATAAGGAGCTCATGATGCATGGTTCTGTACCCATCAATCATGCTGTTTATGATTCAGAGGGCAGCTaGATAGCACTGGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: HHKELMMHGSVPINHAVYDSEGS*IALAQG
Trigger: GCCCTGGGCCAGTGCTATCCAGCTGCCCTCTGAATC...ATAAACAGCATGATTGATGGGTACAGAACCATGCATCATGAGCTCCTTATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR TCA 90 bp GCGCTTTATCAGGTCCCTTTTAAAAGTTGCTCCTGTTTCATTCAGATTTACTATTTCCGGGCTGGCGGCTaGAGCTCCTTCCTACTCAGC +
Preference number: 4 (lower is better)
Translates to: ALYQVPFKSCSCFIQIYYFRAGG*SSFLLS
Trigger: GCTGAGTAGGAAGGAGCTTCAGCCGCCAGCCCGGAA...ATAGTAAATCTGAATGAAACAGGAGCAACTTTTAAAAGGGACCTGATAAAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR TCA 90 bp CTCAGCATGATCTCTCCGCTGTCCGATAGACGCGTTCTCTTAACTACTGCTGCCTTAACCCATGCACATTaGCTTCAGAGTATACACACA +
Preference number: 4 (lower is better)
Translates to: LSMISPLSDRRVLLTTAALTHAH*LQSIHT
Trigger: TGTGTGTATACTCTGAAGTCAATGTGCATGGGTTAA...GGCAGCAGTAGTTAAGAGAACGCGTCTATCGGACAGCGGAGAGATCATGCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR TCA 90 bp CTTACCTTTCTTGGCCTCCTATGGTCTATTCTCCCCTGGACCAACTTCAAAACCAAGGCCCTACACCTCTaGAACGGAGAGACTAATTTG +
Preference number: 4 (lower is better)
Translates to: LTFLGLLWSILPWTNFKTKALHL*NGETNL
Trigger: CAAATTAGTCTCTCCGTTTCAGAGGTGTAGGGCCTT...GGTTTTGAAGTTGGTCCAGGGGAGAATAGACCATAGGAGGCCAAGAAAGGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR GCA 90 bp CACCAGAAGTTTGCTCCTGGAAGTGAGCATCCAAAGGGTTGCAGCTTACGAGTTGCAACAGGTCAGAGATaGAGGAAGTGTCTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: HQKFAPGSEHPKGCSLRVATGQR*RKCLEK
Trigger: CTTTTCAAGACACTTCCTGCATCTCTGACCTGTTGC...AACTCGTAAGCTGCAACCCTTTGGATGCTCACTTCCAGGAGCAAACTTCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR GCA 90 bp CTTACCTTTCTTGGCCTCCTATGGTCTATTCTCCCCTGGACCAACTTCAAAACCAGAGAGGTTCAGCCCTaGAGTGACTTACATGGGTTA +
Preference number: 4 (lower is better)
Translates to: LTFLGLLWSILPWTNFKTREVQP*SDLHGL
Trigger: TAACCCATGTAAGTCACTGCAGGGCTGAACCTCTCT...GGTTTTGAAGTTGGTCCAGGGGAGAATAGACCATAGGAGGCCAAGAAAGGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp CTTACCTTTCTTGGCCTCCTATGGTCTATTCTCCCCTGGACCAACTTCAAAACCAGGCAACCAACCATATaGCAGCACAAAGAACCCACT +
Preference number: 4 (lower is better)
Translates to: LTFLGLLWSILPWTNFKTRQPTI*QHKEPT
Trigger: AGTGGGTTCTTTGTGCTGCCATATGGTTGGTTGCCT...GGTTTTGAAGTTGGTCCAGGGGAGAATAGACCATAGGAGGCCAAGAAAGGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp CTCAGCATGATCTCTCCGCTGTCCGATAGACGCGTTCTCTTAACTACTGCTGCCCTGTTATTAATGGAGTaGTATCCATGGAACACGTGT +
Preference number: 4 (lower is better)
Translates to: LSMISPLSDRRVLLTTAALLLME*YPWNTC
Trigger: ACACGTGTTCCATGGATACCACTCCATTAATAACAG...GGCAGCAGTAGTTAAGAGAACGCGTCTATCGGACAGCGGAGAGATCATGCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp CCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCCTCACTTCAACCAGCAGTGATTATTaGAAAACTGACCACAGCACT +
Preference number: 4 (lower is better)
Translates to: PLEGKALPPRPRYFCLTSTSSDY*KTDHST
Trigger: AGTGCTGTGGTCAGTTTTCCAATAATCACTGCTGGT...TGAAGTGAGGCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp AAAGTAGACAGTACTTGTAAGAAAGATGCCACTGAAGTGCGCAAACACATAGTCAGCCGCCCCAGCAGCTaGGATTATAGTAGTGCGCCA +
Preference number: 4 (lower is better)
Translates to: KVDSTCKKDATEVRKHIVSRPSS*DYSSAP
Trigger: TGGCGCACTACTATAATCCCAGCTGCTGGGGCGGCT...GACTATGTGTTTGCGCACTTCAGTGGCATCTTTCTTACAAGTACTGTCTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511532.5
CDS-3UTR TCA 90 bp CTTACCTTTCTTGGCCTCCTATGGTCTATTCTCCCCTGGACCAACTTCAAAACCATCATAAGGAGCTCATaGTGCATGGTTCTGTACCCA +
Preference number: 4 (lower is better)
Translates to: LTFLGLLWSILPWTNFKTIIRSS*CMVLYP
Trigger: TGGGTACAGAACCATGCATCATGAGCTCCTTATGAT...GGTTTTGAAGTTGGTCCAGGGGAGAATAGACCATAGGAGGCCAAGAAAGGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR TCA 90 bp CTTACCTTTCTTGGCCTCCTATGGTCTATTCTCCCCTGGACCAACTTCAAAACCTCACGCCTGGCCAACTaGAGTGTTCTTGATGTTATA +
Preference number: 4 (lower is better)
Translates to: LTFLGLLWSILPWTNFKTSRLAN*SVLDVI
Trigger: TATAACATCAAGAACACTTCAGTTGGCCAGGCGTGA...GGTTTTGAAGTTGGTCCAGGGGAGAATAGACCATAGGAGGCCAAGAAAGGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR GCA 90 bp CTCAGCATGATCTCTCCGCTGTCCGATAGACGCGTTCTCTTAACTACTGCTGCCTGGCTGAGATCCATTTaGTATATGAAAATGCACTCT +
Preference number: 4 (lower is better)
Translates to: LSMISPLSDRRVLLTTAAWLRSI*YMKMHS
Trigger: AGAGTGCATTTTCATATAGCAAATGGATCTCAGCCA...GGCAGCAGTAGTTAAGAGAACGCGTCTATCGGACAGCGGAGAGATCATGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR GCA 90 bp CATCATAAGGAGCTCATGATGCATGGTTCTGTACCCATCAATCATGCTGTTTATCATGAGACGCTCCCCTaGAAAGCGACTTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: HHKELMMHGSVPINHAVYHETLP*KATWLS
Trigger: GGAAAGCCAAGTCGCTTTGCAGGGGAGCGTCTCATG...ATAAACAGCATGATTGATGGGTACAGAACCATGCATCATGAGCTCCTTATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp GACTTCACTTACCTTTCTTGGCCTCCTATGGTCTATTCTCCCCTGGACCAACTTGCACAAAGAACCCACTaGAGAAACATTCCATCACCA +
Preference number: 4 (lower is better)
Translates to: DFTYLSWPPMVYSPLDQLAQRTH*RNIPSP
Trigger: TGGTGATGGAATGTTTCTCCAGTGGGTTCTTTGTGC...AAGTTGGTCCAGGGGAGAATAGACCATAGGAGGCCAAGAAAGGTAAGTGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp CCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCCTCACTTCAATGGAGTGGTATCCATaGAACACGTGTTATTTGGTA +
Preference number: 4 (lower is better)
Translates to: PLEGKALPPRPRYFCLTSMEWYP*NTCYLV
Trigger: TACCAAATAACACGTGTTCCATGGATACCACTCCAT...TGAAGTGAGGCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp CCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCCTCACTTCACTGTTATTAATGGAGTaGTATCCATGGAACACGTGT +
Preference number: 4 (lower is better)
Translates to: PLEGKALPPRPRYFCLTSLLLME*YPWNTC
Trigger: ACACGTGTTCCATGGATACCACTCCATTAATAACAG...TGAAGTGAGGCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp GACTTCACTTACCTTTCTTGGCCTCCTATGGTCTATTCTCCCCTGGACCAACTTAGAAGGATTAGAGCCTaGGTTCATGACAATGAGGCT +
Preference number: 4 (lower is better)
Translates to: DFTYLSWPPMVYSPLDQLRRIRA*VHDNEA
Trigger: AGCCTCATTGTCATGAACCCAGGCTCTAATCCTTCT...AAGTTGGTCCAGGGGAGAATAGACCATAGGAGGCCAAGAAAGGTAAGTGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp CACCAGAAGTTTGCTCCTGGAAGTGAGCATCCAAAGGGTTGCAGCTTACGAGTTAGAGAAGAAAGGCCCTaGAGGAAAATAGGAGGTAAT +
Preference number: 4 (lower is better)
Translates to: HQKFAPGSEHPKGCSLRVREERP*RKIGGN
Trigger: ATTACCTCCTATTTTCCTCCAGGGCCTTTCTTCTCT...AACTCGTAAGCTGCAACCCTTTGGATGCTCACTTCCAGGAGCAAACTTCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509278.5
3UTR CAA 72 bp CCAGTTCCTATTCTCATAGGACTTCACTTACCTTTCTaGGCCTCCTATGGTCTATTCTCCCCTGGACCAACT +
Preference number: 4 (lower is better)
Translates to: PVPILIGLHLPF*ASYGLFSPGPT
Trigger: AGTTGGTCCAGGGGAGAATAGACCATAGGAGGCCAAGAAAGGTAAGTGAAGTCCTATGAGAATAGGAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR TCA 90 bp CATAAACTCCATTTTGTTAATGAGGGGCCTGACACAGAGGGCTTAGGAACTTGTACTCTTTTCTCAGCATaGTCTCTCCGCTGTCCGATA +
Preference number: 4 (lower is better)
Translates to: HKLHFVNEGPDTEGLGTCTLFSA*SLRCPI
Trigger: TATCGGACAGCGGAGAGATCATGCTGAGAAAAGAGT...ACAAGTTCCTAAGCCCTCTGTGTCAGGCCCCTCATTAACAAAATGGAGTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR TCA 90 bp GGAAGTAATTCCCAACATGTGTTCACCATAAATCTCAATTCCTTCTCCTGGCTTGTTTGCTCCTGGAAGTaGGCATCCAAAGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GSNSQHVFTINLNSFSWLVCSWK*ASKGLQ
Trigger: CTGCAACCCTTTGGATGCTCACTTCCAGGAGCAAAC...AAGCCAGGAGAAGGAATTGAGATTTATGGTGAACACATGTTGGGAATTACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR TCA 90 bp CACCAGAAGTTTGCTCCTGGAAGTGAGCATCCAAAGGGTTGCAGCTTACGAGTTAACATGTGCATTCCTTaGAATCACTGCACTATGCAA +
Preference number: 4 (lower is better)
Translates to: HQKFAPGSEHPKGCSLRVNMCIP*NHCTMQ
Trigger: TTGCATAGTGCAGTGATTTCAAGGAATGCACATGTT...AACTCGTAAGCTGCAACCCTTTGGATGCTCACTTCCAGGAGCAAACTTCTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR GCA 90 bp AATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCTCTCTTAACTACTGCTaGCACCTGCTGGTTTTGTCA +
Preference number: 4 (lower is better)
Translates to: NLIPLEGKALPPRPRYFCSLNYC*HLLVLS
Trigger: TGACAAAACCAGCAGGTGGCAGCAGTAGTTAAGAGA...GCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR GCA 90 bp CATAAACTCCATTTTGTTAATGAGGGGCCTGACACAGAGGGCTTAGGAACTTGTCGTTCTCTTAACTACTaGTGCCACCTGCTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: HKLHFVNEGPDTEGLGTCRSLNY*CHLLVL
Trigger: CAAAACCAGCAGGTGGCAGCAGTAGTTAAGAGAACG...ACAAGTTCCTAAGCCCTCTGTGTCAGGCCCCTCATTAACAAAATGGAGTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR GCA 90 bp CCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCCTCACTTCATGGCTGAGATCCATTTaGTATATGAAAATGCACTCT +
Preference number: 4 (lower is better)
Translates to: PLEGKALPPRPRYFCLTSWLRSI*YMKMHS
Trigger: AGAGTGCATTTTCATATAGCAAATGGATCTCAGCCA...TGAAGTGAGGCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp CATAAACTCCATTTTGTTAATGAGGGGCCTGACACAGAGGGCTTAGGAACTTGTAGGCAACCAACCATATaGCAGCACAAAGAACCCACT +
Preference number: 4 (lower is better)
Translates to: HKLHFVNEGPDTEGLGTCRQPTI*QHKEPT
Trigger: AGTGGGTTCTTTGTGCTGCCATATGGTTGGTTGCCT...ACAAGTTCCTAAGCCCTCTGTGTCAGGCCCCTCATTAACAAAATGGAGTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp CTCAGCATGATCTCTCCGCTGTCCGATAGACGCGTTCTCTTAACTACTGCTGCCCATTATGAGCTAAAATaGGTAGATGATGTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: LSMISPLSDRRVLLTTAAHYELK*VDDVEL
Trigger: CAACTCTACATCATCTACCCATTTTAGCTCATAATG...GGCAGCAGTAGTTAAGAGAACGCGTCTATCGGACAGCGGAGAGATCATGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp GCGCTTTATCAGGTCCCTTTTAAAAGTTGCTCCTGTTTCATTCAGATTTACTATTGGGCAGGAGGTGTCTaGATCCCTGAAGCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: ALYQVPFKSCSCFIQIYYWAGGV*IPEAGK
Trigger: CTTGCCTGCTTCAGGGATCCAGACACCTCCTGCCCA...ATAGTAAATCTGAATGAAACAGGAGCAACTTTTAAAAGGGACCTGATAAAGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR TCA 90 bp AAATATCTTTGGAATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAACTCTTTTCTCAGCATaGTCTCTCCGCTGTCCGATA +
Preference number: 4 (lower is better)
Translates to: KYLWNLIPLEGKALPPRPTLFSA*SLRCPI
Trigger: TATCGGACAGCGGAGAGATCATGCTGAGAAAAGAGT...TGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATTCCAAAGATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR TCA 90 bp AATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCCACTGGGGTAATAGGTaGGAAATATGGACTGTAACT +
Preference number: 4 (lower is better)
Translates to: NLIPLEGKALPPRPRYFCHWGNR*EIWTVT
Trigger: AGTTACAGTCCATATTTCTCACCTATTACCCCAGTG...GCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR TCA 90 bp GGATTAGAGCCTGGGTTCATGACAATGAGGCTTTGCCCTGAAGTCACTTTTGTATGTATATGTAGCTACTaGCACTTGCGCTTTATCAGG +
Preference number: 4 (lower is better)
Translates to: GLEPGFMTMRLCPEVTFVCICSY*HLRFIR
Trigger: CCTGATAAAGCGCAAGTGTCAGTAGCTACATATACA...TACAAAAGTGACTTCAGGGCAAAGCCTCATTGTCATGAACCCAGGCTCTAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR TCA 90 bp CACCAGAAGTTTGCTCCTGGAAGTGAGCATCCAAAGGGTTGCAGCTTACGAGTTTCCCTAACTTTACCATaGAACAACCTTAATGGTTCT +
Preference number: 4 (lower is better)
Translates to: HQKFAPGSEHPKGCSLRVSLTLP*NNLNGS
Trigger: AGAACCATTAAGGTTGTTTCATGGTAAAGTTAGGGA...AACTCGTAAGCTGCAACCCTTTGGATGCTCACTTCCAGGAGCAAACTTCTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR GCA 90 bp CATAAACTCCATTTTGTTAATGAGGGGCCTGACACAGAGGGCTTAGGAACTTGTGAAGATACCCCACATTaGAGCTATAAATCCTGGACC +
Preference number: 4 (lower is better)
Translates to: HKLHFVNEGPDTEGLGTCEDTPH*SYKSWT
Trigger: GGTCCAGGATTTATAGCTGCAATGTGGGGTATCTTC...ACAAGTTCCTAAGCCCTCTGTGTCAGGCCCCTCATTAACAAAATGGAGTTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR GCA 90 bp TTCCTTAAACATGAAGATACCCCACATTGCAGCTATAAATCCTGGACCAGCAGTCGTTCTCTTAACTACTaGTGCCACCTGCTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: FLKHEDTPHCSYKSWTSSRSLNY*CHLLVL
Trigger: CAAAACCAGCAGGTGGCAGCAGTAGTTAAGAGAACG...ACTGCTGGTCCAGGATTTATAGCTGCAATGTGGGGTATCTTCATGTTTAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511532.5
CDS-3UTR GCA 90 bp CTTACCTTTCTTGGCCTCCTATGGTCTATTCTCCCCTGGACCAACTTCAAAACCATAAATAAACCCGTGTaGTTGCTGAGAAGCTCAACT +
Preference number: 4 (lower is better)
Translates to: LTFLGLLWSILPWTNFKTINKPV*LLRSST
Trigger: AGTTGAGCTTCTCAGCAAGCACACGGGTTTATTTAT...GGTTTTGAAGTTGGTCCAGGGGAGAATAGACCATAGGAGGCCAAGAAAGGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp AACTGCTGTCAGGTGATAAATACTACCAAGGAAGTAATTCCCAACATGTGTTCAGGAGCTTATGGGTTATaGCTCAAGGGTCAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: NCCQVINTTKEVIPNMCSGAYGL*LKGQLR
Trigger: CCTCAGCTGACCCTTGAGCCATAACCCATAAGCTCC...TGAACACATGTTGGGAATTACTTCCTTGGTAGTATTTATCACCTGACAGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR CCA 90 bp GACTTCACTTACCTTTCTTGGCCTCCTATGGTCTATTCTCCCCTGGACCAACTTCTGTTATTAATGGAGTaGTATCCATGGAACACGTGT +
Preference number: 4 (lower is better)
Translates to: DFTYLSWPPMVYSPLDQLLLLME*YPWNTC
Trigger: ACACGTGTTCCATGGATACCACTCCATTAATAACAG...AAGTTGGTCCAGGGGAGAATAGACCATAGGAGGCCAAGAAAGGTAAGTGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp CCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCCTCACTTCACTTGATGTAGATGATTaGCACAAATGTAGATCCATA +
Preference number: 4 (lower is better)
Translates to: PLEGKALPPRPRYFCLTSLDVDD*HKCRSI
Trigger: TATGGATCTACATTTGTGCCAATCATCTACATCAAG...TGAAGTGAGGCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp CCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCCTCACTTCAAACAGTACTATCAGGTaGGAATGGGTAAAATTTACA +
Preference number: 4 (lower is better)
Translates to: PLEGKALPPRPRYFCLTSNSTIR*EWVKFT
Trigger: TGTAAATTTTACCCATTCCCACCTGATAGTACTGTT...TGAAGTGAGGCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp TTCTGTTTTTCACTTCGGGTAGAATGGGATACCAGTTCCTATTCTCATAGGACTCATTGTTTTGGAGGATaGTTGGGCAGGAGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: FCFSLRVEWDTSSYSHRTHCFGG*LGRRCL
Trigger: CAGACACCTCCTGCCCAACCATCCTCCAAAACAATG...AGTCCTATGAGAATAGGAACTGGTATCCCATTCTACCCGAAGTGAAAAACAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp GGATTAGAGCCTGGGTTCATGACAATGAGGCTTTGCCCTGAAGTCACTTTTGTAAGTACCGCCTGTCTTTaGGCTAAAATTAACAGTGCT +
Preference number: 4 (lower is better)
Translates to: GLEPGFMTMRLCPEVTFVSTACL*AKINSA
Trigger: AGCACTGTTAATTTTAGCCCAAAGACAGGCGGTACT...TACAAAAGTGACTTCAGGGCAAAGCCTCATTGTCATGAACCCAGGCTCTAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR TCA 90 bp GGATTAGAGCCTGGGTTCATGACAATGAGGCTTTGCCCTGAAGTCACTTTTGTAAAGTGGCACAAAATTTaGGCCAAACAAAAGGATAGC +
Preference number: 4 (lower is better)
Translates to: GLEPGFMTMRLCPEVTFVKWHKI*AKQKDS
Trigger: GCTATCCTTTTGTTTGGCTCAAATTTTGTGCCACTT...TACAAAAGTGACTTCAGGGCAAAGCCTCATTGTCATGAACCCAGGCTCTAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR TCA 90 bp TTCTGTTTTTCACTTCGGGTAGAATGGGATACCAGTTCCTATTCTCATAGGACTGTTTCTGAAAAATCATaGGACGCTCCCCTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: FCFSLRVEWDTSSYSHRTVSEKS*DAPLQS
Trigger: GCTTTGCAGGGGAGCGTCTCATGATTTTTCAGAAAC...AGTCCTATGAGAATAGGAACTGGTATCCCATTCTACCCGAAGTGAAAAACAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR GCA 90 bp CTCCTGCATAGCAAAGTAATAAACAGTACTATCAGGTGGGAATGGGTAAAATTTTCCCTGTTGCCCAAATaGAGCCCCCAAGCATTGCAA +
Preference number: 4 (lower is better)
Translates to: LLHSKVINSTIRWEWVKFSLLPK*SPQALQ
Trigger: TTGCAATGCTTGGGGGCTGCATTTGGGCAACAGGGA...AAATTTTACCCATTCCCACCTGATAGTACTGTTTATTACTTTGCTATGCAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR GCA 90 bp GGATTAGAGCCTGGGTTCATGACAATGAGGCTTTGCCCTGAAGTCACTTTTGTAATGACAATGAGGCTTTaGCCTGAAGTCACTTTTGTA +
Preference number: 4 (lower is better)
Translates to: GLEPGFMTMRLCPEVTFVMTMRL*PEVTFV
Trigger: TACAAAAGTGACTTCAGGGCAAAGCCTCATTGTCAT...TACAAAAGTGACTTCAGGGCAAAGCCTCATTGTCATGAACCCAGGCTCTAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp TGTTCTTCGGGTAGTTCCCATTCTTGTCCTAACTCCAGAGGAAAAGAGAAGAAACTTTTCAGGAGCTTATaGGTTATGGCTCAAGGGTCA +
Preference number: 4 (lower is better)
Translates to: CSSGSSHSCPNSRGKEKKLFRSL*VMAQGS
Trigger: TGACCCTTGAGCCATAACCCATAAGCTCCTGAAAAG...TTTCTTCTCTTTTCCTCTGGAGTTAGGACAAGAATGGGAACTACCCGAAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR CCA 90 bp AAATATCTTTGGAATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAGCACAAAGAACCCACTaGAGAAACATTCCATCACCA +
Preference number: 4 (lower is better)
Translates to: KYLWNLIPLEGKALPPRPAQRTH*RNIPSP
Trigger: TGGTGATGGAATGTTTCTCCAGTGGGTTCTTTGTGC...TGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATTCCAAAGATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp AAAGTAGACAGTACTTGTAAGAAAGATGCCACTGAAGTGCGCAAACACATAGTCAGGCAACCAACCATATaGCAGCACAAAGAACCCACT +
Preference number: 4 (lower is better)
Translates to: KVDSTCKKDATEVRKHIVRQPTI*QHKEPT
Trigger: AGTGGGTTCTTTGTGCTGCCATATGGTTGGTTGCCT...GACTATGTGTTTGCGCACTTCAGTGGCATCTTTCTTACAAGTACTGTCTACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511532.5
CDS-3UTR CCA 90 bp AATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCATGGAGTGGTATCCATaGAACACGTGTTATTTGGTA +
Preference number: 4 (lower is better)
Translates to: NLIPLEGKALPPRPRYFCMEWYP*NTCYLV
Trigger: TACCAAATAACACGTGTTCCATGGATACCACTCCAT...GCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp AATAATTGTTTGGATGGGAAGGTGGTGAGCTTAGTAGCTCTTACATGGTGTTCTGTGCGCCACCCTGCCTaGCTTAATTTCAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: NNCLDGKVVSLVALTWCSVRHPA*LNFSFL
Trigger: AAGAAAACTGAAATTAAGCCAGGCAGGGTGGCGCAC...AGAACACCATGTAAGAGCTACTAAGCTCACCACCTTCCCATCCAAACAATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp CATCATAAGGAGCTCATGATGCATGGTTCTGTACCCATCAATCATGCTGTTTATTGCACACTGGCCCTTTaGAATAAGCCCTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: HHKELMMHGSVPINHAVYCTLAL*NKPSGI
Trigger: TATTCCAGAGGGCTTATTCCAAAGGGCCAGTGTGCA...ATAAACAGCATGATTGATGGGTACAGAACCATGCATCATGAGCTCCTTATGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR TCA 90 bp AAATATCTTTGGAATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGCTCCAGTCAAGATaGTGCAAAATGCAAGTATCA +
Preference number: 4 (lower is better)
Translates to: KYLWNLIPLEGKALPPRPRLQSR*CKMQVS
Trigger: TGATACTTGCATTTTGCATCATCTTGACTGGAGCCT...TGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATTCCAAAGATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR GCA 90 bp AAATATCTTTGGAATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAACTCAGAGAGTGATTTaGTATGAACCAACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: KYLWNLIPLEGKALPPRPTQRVI*YEPTAG
Trigger: ACCTGCTGTTGGTTCATAGCAAATCACTCTCTGAGT...TGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATTCCAAAGATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR GCA 90 bp TCTAGGTGCAGTCTTCTGTGCCTATCTAGAGGTTTCTCAGGGACAAAATTGCACGATTGTACGTGTGTCTaGGTGCATTATGTGTATTAT +
Preference number: 4 (lower is better)
Translates to: SRCSLLCLSRGFSGTKLHDCTCV*VHYVYY
Trigger: ATAATACACATAATGCACGCAGACACACGTACAATC...GTGCAATTTTGTCCCTGAGAAACCTCTAGATAGGCACAGAAGACTGCACCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR CCA 90 bp AATAATTGTTTGGATGGGAAGGTGGTGAGCTTAGTAGCTCTTACATGGTGTTCTGCACAAAGAACCCACTaGAGAAACATTCCATCACCA +
Preference number: 4 (lower is better)
Translates to: NNCLDGKVVSLVALTWCSAQRTH*RNIPSP
Trigger: TGGTGATGGAATGTTTCTCCAGTGGGTTCTTTGTGC...AGAACACCATGTAAGAGCTACTAAGCTCACCACCTTCCCATCCAAACAATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp AATAATTGTTTGGATGGGAAGGTGGTGAGCTTAGTAGCTCTTACATGGTGTTCTCAGCCCACTATGCGGTaGTGTACTGTAGAAAGTTTA +
Preference number: 4 (lower is better)
Translates to: NNCLDGKVVSLVALTWCSQPTMR*CTVESL
Trigger: TAAACTTTCTACAGTACACCACCGCATAGTGGGCTG...AGAACACCATGTAAGAGCTACTAAGCTCACCACCTTCCCATCCAAACAATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296529.11
CDS-3UTR CCA 90 bp CATAAACTCCATTTTGTTAATGAGGGGCCTGACACAGAGGGCTTAGGAACTTGTAAAATGAAGCAGAGGTaGGATTTAACCCATGCACAT +
Preference number: 4 (lower is better)
Translates to: HKLHFVNEGPDTEGLGTCKMKQR*DLTHAH
Trigger: ATGTGCATGGGTTAAATCCCACCTCTGCTTCATTTT...ACAAGTTCCTAAGCCCTCTGTGTCAGGCCCCTCATTAACAAAATGGAGTTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp ATGCATGGTTCTGTACCCATCAATCATGCTGTTTATGGATCTTTAAACTTATTGGTTTTGGAGGATGGTTaGGCAGGAGGTGTCTGGATC +
Preference number: 4 (lower is better)
Translates to: MHGSVPINHAVYGSLNLLVLEDG*AGGVWI
Trigger: GATCCAGACACCTCCTGCCCAACCATCCTCCAAAAC...CAATAAGTTTAAAGATCCATAAACAGCATGATTGATGGGTACAGAACCATGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp TTCTGTTTTTCACTTCGGGTAGAATGGGATACCAGTTCCTATTCTCATAGGACTGGAGCTCATGATGCATaGTTCTGTACCCATCAATCA +
Preference number: 4 (lower is better)
Translates to: FCFSLRVEWDTSSYSHRTGAHDA*FCTHQS
Trigger: TGATTGATGGGTACAGAACCATGCATCATGAGCTCC...AGTCCTATGAGAATAGGAACTGGTATCCCATTCTACCCGAAGTGAAAAACAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp GGAAGTAATTCCCAACATGTGTTCACCATAAATCTCAATTCCTTCTCCTGGCTTGACAGGAGATGTGGTTaGGTGGAATACATCATAACC +
Preference number: 4 (lower is better)
Translates to: GSNSQHVFTINLNSFSWLDRRCG*VEYIIT
Trigger: GGTTATGATGTATTCCACCCAACCACATCTCCTGTC...AAGCCAGGAGAAGGAATTGAGATTTATGGTGAACACATGTTGGGAATTACTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR CCA 90 bp GCGCTTTATCAGGTCCCTTTTAAAAGTTGCTCCTGTTTCATTCAGATTTACTATTGGCTTTCCTTTGAGTaGCTGTACTCACTGCGTTCC +
Preference number: 4 (lower is better)
Translates to: ALYQVPFKSCSCFIQIYYWLSFE*LYSLRS
Trigger: GGAACGCAGTGAGTACAGCCACTCAAAGGAAAGCCA...ATAGTAAATCTGAATGAAACAGGAGCAACTTTTAAAAGGGACCTGATAAAGCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514558.5
3UTR CAA 72 bp CCCGTGTGCTTGCTGAGAAGCTCAACTGCGGAAATATaGATTGATTGCTACATAGACCTACCCATAATAAAT +
Preference number: 4 (lower is better)
Translates to: PVCLLRSSTAEI*IDCYIDLPIIN
Trigger: ATTTATTATGGGTAGGTCTATGTAGCAATCAATCAATATTTCCGCAGTTGAGCTTCTCAGCAAGCACACGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR TCA 90 bp AATAATTGTTTGGATGGGAAGGTGGTGAGCTTAGTAGCTCTTACATGGTGTTCTAGGCTCCAGTCAAGATaGTGCAAAATGCAAGTATCA +
Preference number: 4 (lower is better)
Translates to: NNCLDGKVVSLVALTWCSRLQSR*CKMQVS
Trigger: TGATACTTGCATTTTGCATCATCTTGACTGGAGCCT...AGAACACCATGTAAGAGCTACTAAGCTCACCACCTTCCCATCCAAACAATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR TCA 90 bp GCGCTTTATCAGGTCCCTTTTAAAAGTTGCTCCTGTTTCATTCAGATTTACTATCTCCTCCCTTCTCCCTaGAACATTTCCCTGATTAGA +
Preference number: 4 (lower is better)
Translates to: ALYQVPFKSCSCFIQIYYLLPSP*NISLIR
Trigger: TCTAATCAGGGAAATGTTTCAGGGAGAAGGGAGGAG...ATAGTAAATCTGAATGAAACAGGAGCAACTTTTAAAAGGGACCTGATAAAGCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR TCA 90 bp AAGGAGCTCATGATGCATGGTTCTGTACCCATCAATCATGCTGTTTATGGATCTGTATTTGGTATGTTCTaGTCAATACTGCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KELMMHGSVPINHAVYGSVFGMF*SILLAP
Trigger: TGGAGCAAGCAGTATTGATCAGAACATACCAAATAC...AGATCCATAAACAGCATGATTGATGGGTACAGAACCATGCATCATGAGCTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR GCA 90 bp CATAAACTCCATTTTGTTAATGAGGGGCCTGACACAGAGGGCTTAGGAACTTGTCTGTGTTCTAGATTATaGAACACTAGGTACATACTG +
Preference number: 4 (lower is better)
Translates to: HKLHFVNEGPDTEGLGTCLCSRL*NTRYIL
Trigger: CAGTATGTACCTAGTGTTGCATAATCTAGAACACAG...ACAAGTTCCTAAGCCCTCTGTGTCAGGCCCCTCATTAACAAAATGGAGTTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR GCA 90 bp TCTAGGTGCAGTCTTCTGTGCCTATCTAGAGGTTTCTCAGGGACAAAATTGCACCACTATGCAAAATCATaGAGTAAAAACTACAGAGCA +
Preference number: 4 (lower is better)
Translates to: SRCSLLCLSRGFSGTKLHHYAKS*SKNYRA
Trigger: TGCTCTGTAGTTTTTACTGCATGATTTTGCATAGTG...GTGCAATTTTGTCCCTGAGAAACCTCTAGATAGGCACAGAAGACTGCACCTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR CCA 90 bp AATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCTTAGTAGCTCTTACATaGTGTTCTCCAATCTACAAA +
Preference number: 4 (lower is better)
Translates to: NLIPLEGKALPPRPRYFCLVALT*CSPIYK
Trigger: TTTGTAGATTGGAGAACACCATGTAAGAGCTACTAA...GCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp GCGCTTTATCAGGTCCCTTTTAAAAGTTGCTCCTGTTTCATTCAGATTTACTATTGGTCTATTCTCCCCTaGACCAACTTCAAAACCTCC +
Preference number: 4 (lower is better)
Translates to: ALYQVPFKSCSCFIQIYYWSILP*TNFKTS
Trigger: GGAGGTTTTGAAGTTGGTCCAGGGGAGAATAGACCA...ATAGTAAATCTGAATGAAACAGGAGCAACTTTTAAAAGGGACCTGATAAAGCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp ATGCATGGTTCTGTACCCATCAATCATGCTGTTTATGGATCTTTAAACTTATTGTTTCTTGGCCTCCTATaGTCTATTCTCCCCTGGACC +
Preference number: 4 (lower is better)
Translates to: MHGSVPINHAVYGSLNLLFLGLL*SILPWT
Trigger: GGTCCAGGGGAGAATAGACCATAGGAGGCCAAGAAA...CAATAAGTTTAAAGATCCATAAACAGCATGATTGATGGGTACAGAACCATGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp CATCATAAGGAGCTCATGATGCATGGTTCTGTACCCATCAATCATGCTGTTTATTCACTTCGGGTAGAATaGGATACCAGTTCCTATTCT +
Preference number: 4 (lower is better)
Translates to: HHKELMMHGSVPINHAVYSLRVE*DTSSYS
Trigger: AGAATAGGAACTGGTATCCCATTCTACCCGAAGTGA...ATAAACAGCATGATTGATGGGTACAGAACCATGCATCATGAGCTCCTTATGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp ATGCATGGTTCTGTACCCATCAATCATGCTGTTTATGGATCTTTAAACTTATTGGACTTACATGGGTTATaGCTCAAGGGTCAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: MHGSVPINHAVYGSLNLLDLHGL*LKGQLR
Trigger: CCTCAGCTGACCCTTGAGCCATAACCCATGTAAGTC...CAATAAGTTTAAAGATCCATAAACAGCATGATTGATGGGTACAGAACCATGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR TCA 90 bp AATAATTGTTTGGATGGGAAGGTGGTGAGCTTAGTAGCTCTTACATGGTGTTCTAAGTGGCACAAAATTTaGGCCAAACAAAAGGATAGC +
Preference number: 4 (lower is better)
Translates to: NNCLDGKVVSLVALTWCSKWHKI*AKQKDS
Trigger: GCTATCCTTTTGTTTGGCTCAAATTTTGTGCCACTT...AGAACACCATGTAAGAGCTACTAAGCTCACCACCTTCCCATCCAAACAATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR TCA 90 bp CAACTGCTGTCAGGTGATAAATACTACCAAGGAAGTAATTCCCAACATGTGTTCAAGTGGCACAAAATTTaGGCCAAACAAAAGGATAGC +
Preference number: 4 (lower is better)
Translates to: QLLSGDKYYQGSNSQHVFKWHKI*AKQKDS
Trigger: GCTATCCTTTTGTTTGGCTCAAATTTTGTGCCACTT...GAACACATGTTGGGAATTACTTCCTTGGTAGTATTTATCACCTGACAGCAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR TCA 90 bp CTCCTGCATAGCAAAGTAATAAACAGTACTATCAGGTGGGAATGGGTAAAATTTACAGCACTCAGAGAGTaGTTTGCTATGAACCAACAG +
Preference number: 4 (lower is better)
Translates to: LLHSKVINSTIRWEWVKFTALRE*FAMNQQ
Trigger: CTGTTGGTTCATAGCAAATCACTCTCTGAGTGCTGT...AAATTTTACCCATTCCCACCTGATAGTACTGTTTATTACTTTGCTATGCAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR TCA 90 bp AATAATTGTTTGGATGGGAAGGTGGTGAGCTTAGTAGCTCTTACATGGTGTTCTTTAACCCATGCACATTaGCTTCAGAGTATACACACA +
Preference number: 4 (lower is better)
Translates to: NNCLDGKVVSLVALTWCSLTHAH*LQSIHT
Trigger: TGTGTGTATACTCTGAAGTCAATGTGCATGGGTTAA...AGAACACCATGTAAGAGCTACTAAGCTCACCACCTTCCCATCCAAACAATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR GCA 90 bp TTAGAGCCTGGGTTCATGACAATGAGGCTTTGCCCTGAAGTCACTTTTGTATATAGCGTCTTTCCACAATaGCATCTTGGATTCATATTT +
Preference number: 4 (lower is better)
Translates to: LEPGFMTMRLCPEVTFVYSVFPQ*HLGFIF
Trigger: AAATATGAATCCAAGATGGCATTGTGGAAAGACGCT...ATATACAAAAGTGACTTCAGGGCAAAGCCTCATTGTCATGAACCCAGGCTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR GCA 90 bp AAGGAGCTCATGATGCATGGTTCTGTACCCATCAATCATGCTGTTTATGGATCTCTGATCAATACTGCTTaGTCCACTCCAACTAAAATT +
Preference number: 4 (lower is better)
Translates to: KELMMHGSVPINHAVYGSLINTA*STPTKI
Trigger: AATTTTAGTTGGAGTGGAGCAAGCAGTATTGATCAG...AGATCCATAAACAGCATGATTGATGGGTACAGAACCATGCATCATGAGCTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp CATCATAAGGAGCTCATGATGCATGGTTCTGTACCCATCAATCATGCTGTTTATATGGAGTGGTATCCATaGAACACGTGTTATTTGGTA +
Preference number: 4 (lower is better)
Translates to: HHKELMMHGSVPINHAVYMEWYP*NTCYLV
Trigger: TACCAAATAACACGTGTTCCATGGATACCACTCCAT...ATAAACAGCATGATTGATGGGTACAGAACCATGCATCATGAGCTCCTTATGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp AATAATTGTTTGGATGGGAAGGTGGTGAGCTTAGTAGCTCTTACATGGTGTTCTAAAATGAAGCAGAGGTaGGATTTAACCCATGCACAT +
Preference number: 4 (lower is better)
Translates to: NNCLDGKVVSLVALTWCSKMKQR*DLTHAH
Trigger: ATGTGCATGGGTTAAATCCCACCTCTGCTTCATTTT...AGAACACCATGTAAGAGCTACTAAGCTCACCACCTTCCCATCCAAACAATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp TTAGAGCCTGGGTTCATGACAATGAGGCTTTGCCCTGAAGTCACTTTTGTATATAAAAAGACACATGACTaGGTGATAGCTAACACATCA +
Preference number: 4 (lower is better)
Translates to: LEPGFMTMRLCPEVTFVYKKTHD*VIANTS
Trigger: TGATGTGTTAGCTATCACCCAGTCATGTGTCTTTTT...ATATACAAAAGTGACTTCAGGGCAAAGCCTCATTGTCATGAACCCAGGCTCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp GGAAGTAATTCCCAACATGTGTTCACCATAAATCTCAATTCCTTCTCCTGGCTTGACTTTCAGACAAACTaGTATGAGCACTGTCAAATG +
Preference number: 4 (lower is better)
Translates to: GSNSQHVFTINLNSFSWLDFQTN*YEHCQM
Trigger: CATTTGACAGTGCTCATACCAGTTTGTCTGAAAGTC...AAGCCAGGAGAAGGAATTGAGATTTATGGTGAACACATGTTGGGAATTACTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR TCA 90 bp CTCCTGCATAGCAAAGTAATAAACAGTACTATCAGGTGGGAATGGGTAAAATTTCACTGGGGTAATAGGTaGGAAATATGGACTGTAACT +
Preference number: 4 (lower is better)
Translates to: LLHSKVINSTIRWEWVKFHWGNR*EIWTVT
Trigger: AGTTACAGTCCATATTTCTCACCTATTACCCCAGTG...AAATTTTACCCATTCCCACCTGATAGTACTGTTTATTACTTTGCTATGCAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR TCA 90 bp GCGCTTTATCAGGTCCCTTTTAAAAGTTGCTCCTGTTTCATTCAGATTTACTATGGCAAATTATTTTATTaGGAAGGCTCCACAAAGGCC +
Preference number: 4 (lower is better)
Translates to: ALYQVPFKSCSCFIQIYYGKLFY*EGSTKA
Trigger: GGCCTTTGTGGAGCCTTCTCAATAAAATAATTTGCC...ATAGTAAATCTGAATGAAACAGGAGCAACTTTTAAAAGGGACCTGATAAAGCGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR TCA 90 bp GCGTGCATTATGTGTATTATCACACATCTTTATTCATCTAGGTGCAGTCTTCTGATGGTTCTCCTATTCTaGCTTTCAGACAAACTGGTA +
Preference number: 4 (lower is better)
Translates to: ACIMCIITHLYSSRCSLLMVLLF*LSDKLV
Trigger: TACCAGTTTGTCTGAAAGTCAGAATAGGAGAACCAT...CAGAAGACTGCACCTAGATGAATAAAGATGTGTGATAATACACATAATGCACGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR GCA 90 bp AATAATTGTTTGGATGGGAAGGTGGTGAGCTTAGTAGCTCTTACATGGTGTTCTGTTGTGTTGATCACATaGTCTGTTATTAATGGAGTG +
Preference number: 4 (lower is better)
Translates to: NNCLDGKVVSLVALTWCSVVLIT*SVINGV
Trigger: CACTCCATTAATAACAGAGCATGTGATCAACACAAC...AGAACACCATGTAAGAGCTACTAAGCTCACCACCTTCCCATCCAAACAATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296529.11
CDS-3UTR GCA 90 bp AACTGCTGTCAGGTGATAAATACTACCAAGGAAGTAATTCCCAACATGTGTTCACTTTATTCATCTAGGTaGAGTCTTCTGTGCCTATCT +
Preference number: 4 (lower is better)
Translates to: NCCQVINTTKEVIPNMCSLYSSR*SLLCLS
Trigger: AGATAGGCACAGAAGACTGCACCTAGATGAATAAAG...TGAACACATGTTGGGAATTACTTCCTTGGTAGTATTTATCACCTGACAGCAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR GCA 90 bp AAGGAGCTCATGATGCATGGTTCTGTACCCATCAATCATGCTGTTTATGGATCTATGAAGTTTATTGCATaGAGCTCTTGTACATTTCAG +
Preference number: 4 (lower is better)
Translates to: KELMMHGSVPINHAVYGSMKFIA*SSCTFQ
Trigger: CTGAAATGTACAAGAGCTGCATGCAATAAACTTCAT...AGATCCATAAACAGCATGATTGATGGGTACAGAACCATGCATCATGAGCTCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR GCA 90 bp TTAGAGCCTGGGTTCATGACAATGAGGCTTTGCCCTGAAGTCACTTTTGTATATCATACTATACTCACATaGTCTGTTATTAATGGAGTG +
Preference number: 4 (lower is better)
Translates to: LEPGFMTMRLCPEVTFVYHTILT*SVINGV
Trigger: CACTCCATTAATAACAGAGCATGTGAGTATAGTATG...ATATACAAAAGTGACTTCAGGGCAAAGCCTCATTGTCATGAACCCAGGCTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp AATAATTGTTTGGATGGGAAGGTGGTGAGCTTAGTAGCTCTTACATGGTGTTCTAATGGTTTTGATAATTaGGACAACAGCAATGTTCCC +
Preference number: 4 (lower is better)
Translates to: NNCLDGKVVSLVALTWCSNGFDN*DNSNVP
Trigger: GGGAACATTGCTGTTGTCCCAATTATCAAAACCATT...AGAACACCATGTAAGAGCTACTAAGCTCACCACCTTCCCATCCAAACAATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp TTCTGTTTTTCACTTCGGGTAGAATGGGATACCAGTTCCTATTCTCATAGGACTAATGGTTTTGATAATTaGGACAACAGCAATGTTCCC +
Preference number: 4 (lower is better)
Translates to: FCFSLRVEWDTSSYSHRTNGFDN*DNSNVP
Trigger: GGGAACATTGCTGTTGTCCCAATTATCAAAACCATT...AGTCCTATGAGAATAGGAACTGGTATCCCATTCTACCCGAAGTGAAAAACAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp GCGCTTTATCAGGTCCCTTTTAAAAGTTGCTCCTGTTTCATTCAGATTTACTATTCATATTTTGCACACTaGCCCTTTGGAATAAGCCCT +
Preference number: 4 (lower is better)
Translates to: ALYQVPFKSCSCFIQIYYSYFAH*PFGISP
Trigger: AGGGCTTATTCCAAAGGGCCAGTGTGCAAAATATGA...ATAGTAAATCTGAATGAAACAGGAGCAACTTTTAAAAGGGACCTGATAAAGCGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR TCA 90 bp CTCCTGCATAGCAAAGTAATAAACAGTACTATCAGGTGGGAATGGGTAAAATTTAAGTGGCACAAAATTTaGGCCAAACAAAAGGATAGC +
Preference number: 4 (lower is better)
Translates to: LLHSKVINSTIRWEWVKFKWHKI*AKQKDS
Trigger: GCTATCCTTTTGTTTGGCTCAAATTTTGTGCCACTT...AAATTTTACCCATTCCCACCTGATAGTACTGTTTATTACTTTGCTATGCAGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR GCA 90 bp TCACACATCTTTATTCATCTAGGTGCAGTCTTCTGTGCCTATCTAGAGGTTTCTATCCTATTTTCTAAGTaGACGAAGACAAAGAATTGG +
Preference number: 4 (lower is better)
Translates to: SHIFIHLGAVFCAYLEVSILFSK*TKTKNW
Trigger: CCAATTCTTTGTCTTCGTGCACTTAGAAAATAGGAT...AGAAACCTCTAGATAGGCACAGAAGACTGCACCTAGATGAATAAAGATGTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR CCA 90 bp AATAATTGTTTGGATGGGAAGGTGGTGAGCTTAGTAGCTCTTACATGGTGTTCTCTTGATGTAGATGATTaGCACAAATGTAGATCCATA +
Preference number: 4 (lower is better)
Translates to: NNCLDGKVVSLVALTWCSLDVDD*HKCRSI
Trigger: TATGGATCTACATTTGTGCCAATCATCTACATCAAG...AGAACACCATGTAAGAGCTACTAAGCTCACCACCTTCCCATCCAAACAATTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp AATAATTGTTTGGATGGGAAGGTGGTGAGCTTAGTAGCTCTTACATGGTGTTCTCAACAAACATTGTACTaGCAGTTCTGTTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: NNCLDGKVVSLVALTWCSQQTLY*QFCFSF
Trigger: AAAACTGAAACAGAACTGCCAGTACAATGTTTGTTG...AGAACACCATGTAAGAGCTACTAAGCTCACCACCTTCCCATCCAAACAATTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR GCA 90 bp ATGCATGGTTCTGTACCCATCAATCATGCTGTTTATGGATCTTTAAACTTATTGCTTGGATTCATATTTTaGACACTGGCCCTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: MHGSVPINHAVYGSLNLLLGFIF*TLALWN
Trigger: ATTCCAAAGGGCCAGTGTGCAAAATATGAATCCAAG...CAATAAGTTTAAAGATCCATAAACAGCATGATTGATGGGTACAGAACCATGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR GCA 90 bp GCGTGCATTATGTGTATTATCACACATCTTTATTCATCTAGGTGCAGTCTTCTGCACATTAGTCAGTTCTaGTATAATGTAACATGTGCA +
Preference number: 4 (lower is better)
Translates to: ACIMCIITHLYSSRCSLLHISQF*YNVTCA
Trigger: TGCACATGTTACATTATAGCAGAACTGACTAATGTG...CAGAAGACTGCACCTAGATGAATAAAGATGTGTGATAATACACATAATGCACGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR CCA 90 bp CTCCTGCATAGCAAAGTAATAAACAGTACTATCAGGTGGGAATGGGTAAAATTTAATGGTTTTGATAATTaGGACAACAGCAATGTTCCC +
Preference number: 4 (lower is better)
Translates to: LLHSKVINSTIRWEWVKFNGFDN*DNSNVP
Trigger: GGGAACATTGCTGTTGTCCCAATTATCAAAACCATT...AAATTTTACCCATTCCCACCTGATAGTACTGTTTATTACTTTGCTATGCAGGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR GCA 90 bp GCGCTTTATCAGGTCCCTTTTAAAAGTTGCTCCTGTTTCATTCAGATTTACTATTTTCCCAATTCTTCCTaGACAAAACCTAAAAAGTCT +
Preference number: 4 (lower is better)
Translates to: ALYQVPFKSCSCFIQIYYFPNSS*TKPKKS
Trigger: AGACTTTTTAGGTTTTGTGCAGGAAGAATTGGGAAA...ATAGTAAATCTGAATGAAACAGGAGCAACTTTTAAAAGGGACCTGATAAAGCGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CCA 90 bp CTCCTGCATAGCAAAGTAATAAACAGTACTATCAGGTGGGAATGGGTAAAATTTAACAGTACTATCAGGTaGGAATGGGTAAAATTTACA +
Preference number: 4 (lower is better)
Translates to: LLHSKVINSTIRWEWVKFNSTIR*EWVKFT
Trigger: TGTAAATTTTACCCATTCCCACCTGATAGTACTGTT...AAATTTTACCCATTCCCACCTGATAGTACTGTTTATTACTTTGCTATGCAGGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CCA 90 bp CTCCTGCATAGCAAAGTAATAAACAGTACTATCAGGTGGGAATGGGTAAAATTTTTAGTAGCTCTTACATaGTGTTCTCCAATCTACAAA +
Preference number: 4 (lower is better)
Translates to: LLHSKVINSTIRWEWVKFLVALT*CSPIYK
Trigger: TTTGTAGATTGGAGAACACCATGTAAGAGCTACTAA...AAATTTTACCCATTCCCACCTGATAGTACTGTTTATTACTTTGCTATGCAGGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS CCA 90 bp CCTTCCTACTCAGCGCCGGCGCGATCCGCCCACTACGTGCCAGTGTaGAGCCGGAGCCTGACTCATTCCCTCTACGTGCTGGGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: PSYSAPARSAHYVPV*SRSLTHSLYVLGAA
Trigger: GGCCGCCCCCAGCACGTAGAGGGAATGAGTCAGGCTCCGGCTCCACACTGGCACGTAGTGGGCGGATCGCGCCGGCGCTGAGTAGGAAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508243.5
ENST00000512481.5
CDS CCA 90 bp CGACTTGGCTTTCCTTTGAGTGGCTGTACTCACTGCGTTCCGGGCTaGCGGCTGAAGCTCCTTCCTACTCAGCGCCGGCGCGATCCGCCC +
Preference number: 5 (lower is better)
Translates to: RLGFPLSGCTHCVPG*RLKLLPTQRRRDPP
Trigger: GGGCGGATCGCGCCGGCGCTGAGTAGGAAGGAGCTTCAGCCGCCAGCCCGGAACGCAGTGAGTACAGCCACTCAAAGGAAAGCCAAGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS CCA 90 bp TGGAGCCGGAGCCTGACTCATTCCCTCTACGTGCTGGGGGCGGCCTaGCCAGCCTTTACTTTCTGCGGGGACAATTTCCCATACACCGGC +
Preference number: 5 (lower is better)
Translates to: WSRSLTHSLYVLGAA*PAFTFCGDNFPYTG
Trigger: GCCGGTGTATGGGAAATTGTCCCCGCAGAAAGTAAAGGCTGGCCAGGCCGCCCCCAGCACGTAGAGGGAATGAGTCAGGCTCCGGCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508243.5
CDS GCA 90 bp TCCCCTGCAAAGCGACTTGGCTTTCCTTTGAGTGGCTGTACTCACTaGGTTCCGGGCTGGCGGCTGAAGCTCCTTCCTACTCAGCGCCGG +
Preference number: 5 (lower is better)
Translates to: SPAKRLGFPLSGCTH*VPGWRLKLLPTQRR
Trigger: CCGGCGCTGAGTAGGAAGGAGCTTCAGCCGCCAGCCCGGAACGCAGTGAGTACAGCCACTCAAAGGAAAGCCAAGTCGCTTTGCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS GCA 90 bp GTTCCCAGGGTGCTCGCGAAGAGCGCCAATCCAGCCTTGACTTCCTaGTGGGACGTTTACCTCCACTTAAGGAGGGTGGAGAAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: VPRVLAKSANPALTS*WDVYLHLRRVEKGG
Trigger: CCCTCCTTTCTCCACCCTCCTTAAGTGGAGGTAAACGTCCCAGCAGGAAGTCAAGGCTGGATTGGCGCTCTTCGCGAGCACCCTGGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508243.5
CDS CCA 90 bp CCCAGGGTGCTCGCGAAGAGCGCCAATCCAGCCTTGACTTCCTGCTaGGACGTTTACCTCCACTTAAGGAGGGTGGAGAAAGGAGGGCTT +
Preference number: 5 (lower is better)
Translates to: PRVLAKSANPALTSC*DVYLHLRRVEKGGL
Trigger: AAGCCCTCCTTTCTCCACCCTCCTTAAGTGGAGGTAAACGTCCCAGCAGGAAGTCAAGGCTGGATTGGCGCTCTTCGCGAGCACCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508243.5
CDS CCA 90 bp AATCATGAGACGCTCCCCTGCAAAGCGACTTGGCTTTCCTTTGAGTaGCTGTACTCACTGCGTTCCGGGCTGGCGGCTGAAGCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: NHETLPCKATWLSFE*LYSLRSGLAAEAPS
Trigger: GGAAGGAGCTTCAGCCGCCAGCCCGGAACGCAGTGAGTACAGCCACTCAAAGGAAAGCCAAGTCGCTTTGCAGGGGAGCGTCTCATGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS CCA 90 bp AGCACGTTTCTGAAAAATCATGAGACGCTCCCCTGCAAAGCGACTTaGCTTTCCTTTGAGTGGCTGTACTCACTGCGTTCCGGGCTGGCG +
Preference number: 5 (lower is better)
Translates to: STFLKNHETLPCKAT*LSFEWLYSLRSGLA
Trigger: CGCCAGCCCGGAACGCAGTGAGTACAGCCACTCAAAGGAAAGCCAAGTCGCTTTGCAGGGGAGCGTCTCATGATTTTTCAGAAACGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CAA 90 bp CTCAGCATGATCTCTCCGCTGTCCGATAGACGCGTTCTCTTAACTACTGCTGCCTGGGACCTTGCTATGTaGCCTAGGCTGGCAGATTTG +
Preference number: 5 (lower is better)
Translates to: LSMISPLSDRRVLLTTAAWDLAM*PRLADL
Trigger: CAAATCTGCCAGCCTAGGCAACATAGCAAGGTCCCA...GGCAGCAGTAGTTAAGAGAACGCGTCTATCGGACAGCGGAGAGATCATGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CAA 90 bp CCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCCTCACTTCAGTTAGGTCTGCTCCATaGTTGCTCATGATTCCAGTC +
Preference number: 5 (lower is better)
Translates to: PLEGKALPPRPRYFCLTSVRSAP*LLMIPV
Trigger: GACTGGAATCATGAGCAACAATGGAGCAGACCTAAC...TGAAGTGAGGCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CAA 90 bp GACTTCACTTACCTTTCTTGGCCTCCTATGGTCTATTCTCCCCTGGACCAACTTCAAACCAGCCAAACCTaGAGCTTGCCCAGCCAGTTA +
Preference number: 5 (lower is better)
Translates to: DFTYLSWPPMVYSPLDQLQTSQT*SLPSQL
Trigger: TAACTGGCTGGGCAAGCTCAAGGTTTGGCTGGTTTG...AAGTTGGTCCAGGGGAGAATAGACCATAGGAGGCCAAGAAAGGTAAGTGAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CAA 90 bp CATCATAAGGAGCTCATGATGCATGGTTCTGTACCCATCAATCATGCTGTTTATGGTGATCTGCCCACCTaGACCTCCCACAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: HHKELMMHGSVPINHAVYGDLPT*TSHSAG
Trigger: CCCAGCACTGTGGGAGGTCAAGGTGGGCAGATCACC...ATAAACAGCATGATTGATGGGTACAGAACCATGCATCATGAGCTCCTTATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CAA 90 bp AATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCAGCCAAACCTTGAGCTaGCCCAGCCAGTTAAGGCAT +
Preference number: 5 (lower is better)
Translates to: NLIPLEGKALPPRPRYFCSQTLS*PSQLRH
Trigger: ATGCCTTAACTGGCTGGGCAAGCTCAAGGTTTGGCT...GCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CAA 90 bp AATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCCCAGGAACAGGGGTCTaGGGTTGTGTTGATCACATG +
Preference number: 5 (lower is better)
Translates to: NLIPLEGKALPPRPRYFCPGTGV*GCVDHM
Trigger: CATGTGATCAACACAACCCAAGACCCCTGTTCCTGG...GCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296529.11
CDS TCA 90 bp ATTATTATTCTACTGTTAGGCTCAAAGAGAGGTTCAGCCCTGCAGTaGCTTACATGGGTTATGGCTCAAGGGTCAGCTGAGGCAGGTGCT +
Preference number: 5 (lower is better)
Translates to: IIILLLGSKRGSALQ*LTWVMAQGSAEAGA
Trigger: AGCACCTGCCTCAGCTGACCCTTGAGCCATAACCCATGTAAGTCACTGCAGGGCTGAACCTCTCTTTGAGCCTAACAGTAGAATAATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513744.5
ENST00000514558.5
CDS-3UTR CAA 90 bp CTCAGCATGATCTCTCCGCTGTCCGATAGACGCGTTCTCTTAACTACTGCTGCCTGCCACCTGCTGGTTTaGTCATTGTTAGATTTTAGA +
Preference number: 5 (lower is better)
Translates to: LSMISPLSDRRVLLTTAACHLLV*SLLDFR
Trigger: TCTAAAATCTAACAATGACAAAACCAGCAGGTGGCA...GGCAGCAGTAGTTAAGAGAACGCGTCTATCGGACAGCGGAGAGATCATGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CAA 90 bp CCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCCTCACTTCAGTGGCTGAGATCCATTaGCTATATGAAAATGCACTC +
Preference number: 5 (lower is better)
Translates to: PLEGKALPPRPRYFCLTSVAEIH*LYENAL
Trigger: GAGTGCATTTTCATATAGCAAATGGATCTCAGCCAC...TGAAGTGAGGCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS GCA 90 bp AGGAGGTACAGCGTCTTTCCACAATGCCATCTTGGATTCATATTTTaGACACTGGCCCTTTGGAATAAGCCCTATGGGTTATGGCTCAAG +
Preference number: 5 (lower is better)
Translates to: RRYSVFPQCHLGFIF*TLALWNKPYGLWLK
Trigger: CTTGAGCCATAACCCATAGGGCTTATTCCAAAGGGCCAGTGTGCAAAATATGAATCCAAGATGGCATTGTGGAAAGACGCTGTACCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000505189.5
ENST00000511038.5
ENST00000512481.5
ENST00000514346.5
CDS-3UTR CAA 90 bp CCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCCTCACTTCATGGTTCACTTTAGACTaGATGTACTTTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: PLEGKALPPRPRYFCLTSWFTLD*MYFSGA
Trigger: AGCTCCTGAAAAGTACATCAAGTCTAAAGTGAACCA...TGAAGTGAGGCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CAA 90 bp TCTAGGTGCAGTCTTCTGTGCCTATCTAGAGGTTTCTCAGGGACAAAATTGCACGTTAGGTCTGCTCCATaGTTGCTCATGATTCCAGTC +
Preference number: 5 (lower is better)
Translates to: SRCSLLCLSRGFSGTKLHVRSAP*LLMIPV
Trigger: GACTGGAATCATGAGCAACAATGGAGCAGACCTAAC...GTGCAATTTTGTCCCTGAGAAACCTCTAGATAGGCACAGAAGACTGCACCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR CAA 90 bp CCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCCTCACTTCACCTAAACCAATGGTTTaGATAATTGGGACAACAGCA +
Preference number: 5 (lower is better)
Translates to: PLEGKALPPRPRYFCLTSPKPMV*IIGTTA
Trigger: TGCTGTTGTCCCAATTATCAAAACCATTGGTTTAGG...TGAAGTGAGGCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CAA 90 bp AAATATCTTTGGAATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGCCAAACCTTGAGCTaGCCCAGCCAGTTAAGGCAT +
Preference number: 5 (lower is better)
Translates to: KYLWNLIPLEGKALPPRPSQTLS*PSQLRH
Trigger: ATGCCTTAACTGGCTGGGCAAGCTCAAGGTTTGGCT...TGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATTCCAAAGATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CAA 90 bp CTCAGCATGATCTCTCCGCTGTCCGATAGACGCGTTCTCTTAACTACTGCTGCCTGGACTGTAACTTCTTaGTATATGGACTCTATACTG +
Preference number: 5 (lower is better)
Translates to: LSMISPLSDRRVLLTTAAWTVTS*YMDSIL
Trigger: CAGTATAGAGTCCATATACAAAGAAGTTACAGTCCA...GGCAGCAGTAGTTAAGAGAACGCGTCTATCGGACAGCGGAGAGATCATGCTGAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CAA 90 bp AAATATCTTTGGAATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCATGGGACCTTGCTATGTaGCCTAGGCTGGCAGATTTG +
Preference number: 5 (lower is better)
Translates to: KYLWNLIPLEGKALPPRPWDLAM*PRLADL
Trigger: CAAATCTGCCAGCCTAGGCAACATAGCAAGGTCCCA...TGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATTCCAAAGATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CAA 90 bp TTAGAGCCTGGGTTCATGACAATGAGGCTTTGCCCTGAAGTCACTTTTGTATATCGACTTGGCTTTCCTTaGAGTGGCTGTACTCACTGC +
Preference number: 5 (lower is better)
Translates to: LEPGFMTMRLCPEVTFVYRLGFP*SGCTHC
Trigger: GCAGTGAGTACAGCCACTCAAAGGAAAGCCAAGTCG...ATATACAAAAGTGACTTCAGGGCAAAGCCTCATTGTCATGAACCCAGGCTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS GCA 90 bp AGGAGGTACAGCGTCTTTCCACAATGCCATCTTGGATTCATATTTTaGACACTGGCCCTTTGGAATAAGCCCTCTGGAATAGAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: RRYSVFPQCHLGFIF*TLALWNKPSGIEAE
Trigger: TTCTGCTTCTATTCCAGAGGGCTTATTCCAAAGGGCCAGTGTGCAAAATATGAATCCAAGATGGCATTGTGGAAAGACGCTGTACCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CAA 90 bp AATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCAGGTCTGCTCCATTGTaGCTCATGATTCCAGTCTTA +
Preference number: 5 (lower is better)
Translates to: NLIPLEGKALPPRPRYFCRSAPL*LMIPVL
Trigger: TAAGACTGGAATCATGAGCAACAATGGAGCAGACCT...GCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CAA 90 bp AATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCGCCTGTCATTTTATTTaGCCTACTGGAAACCACCAG +
Preference number: 5 (lower is better)
Translates to: NLIPLEGKALPPRPRYFCACHFI*PTGNHQ
Trigger: CTGGTGGTTTCCAGTAGGCAAAATAAAATGACAGGC...GCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CAA 90 bp GACTTCACTTACCTTTCTTGGCCTCCTATGGTCTATTCTCCCCTGGACCAACTTTCTTGGATTCATATTTaGCACACTGGCCCTTTGGAA +
Preference number: 5 (lower is better)
Translates to: DFTYLSWPPMVYSPLDQLSWIHI*HTGPLE
Trigger: TTCCAAAGGGCCAGTGTGCAAAATATGAATCCAAGA...AAGTTGGTCCAGGGGAGAATAGACCATAGGAGGCCAAGAAAGGTAAGTGAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CAA 90 bp TTAGAGCCTGGGTTCATGACAATGAGGCTTTGCCCTGAAGTCACTTTTGTATATAATAAACCCGTGTGCTaGCTGAGAAGCTCAACTGCG +
Preference number: 5 (lower is better)
Translates to: LEPGFMTMRLCPEVTFVYNKPVC*LRSSTA
Trigger: CGCAGTTGAGCTTCTCAGCAAGCACACGGGTTTATT...ATATACAAAAGTGACTTCAGGGCAAAGCCTCATTGTCATGAACCCAGGCTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CAA 90 bp AAATATCTTTGGAATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAGTTAGGTCTGCTCCATaGTTGCTCATGATTCCAGTC +
Preference number: 5 (lower is better)
Translates to: KYLWNLIPLEGKALPPRPVRSAP*LLMIPV
Trigger: GACTGGAATCATGAGCAACAATGGAGCAGACCTAAC...TGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATTCCAAAGATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CAA 90 bp ATTTTAATTGAAAAACACCAGAAGTTTGCTCCTGGAAGTGAGCATCCAAAGGGTGTATTGGGTGAGGAGTaGGGACAGGAGATGTGGTTG +
Preference number: 5 (lower is better)
Translates to: ILIEKHQKFAPGSEHPKGVLGEE*GQEMWL
Trigger: CAACCACATCTCCTGTCCCAACTCCTCACCCAATAC...ACCCTTTGGATGCTCACTTCCAGGAGCAAACTTCTGGTGTTTTTCAATTAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR CAA 90 bp AATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCTGGTTCACTTTAGACTaGATGTACTTTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: NLIPLEGKALPPRPRYFCWFTLD*MYFSGA
Trigger: AGCTCCTGAAAAGTACATCAAGTCTAAAGTGAACCA...GCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CAA 90 bp GGATTAGAGCCTGGGTTCATGACAATGAGGCTTTGCCCTGAAGTCACTTTTGTACCTAAACCAATGGTTTaGATAATTGGGACAACAGCA +
Preference number: 5 (lower is better)
Translates to: GLEPGFMTMRLCPEVTFVPKPMV*IIGTTA
Trigger: TGCTGTTGTCCCAATTATCAAAACCATTGGTTTAGG...TACAAAAGTGACTTCAGGGCAAAGCCTCATTGTCATGAACCCAGGCTCTAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CAA 90 bp CTCCTGCATAGCAAAGTAATAAACAGTACTATCAGGTGGGAATGGGTAAAATTTCAAACCAGCCAAACCTaGAGCTTGCCCAGCCAGTTA +
Preference number: 5 (lower is better)
Translates to: LLHSKVINSTIRWEWVKFQTSQT*SLPSQL
Trigger: TAACTGGCTGGGCAAGCTCAAGGTTTGGCTGGTTTG...AAATTTTACCCATTCCCACCTGATAGTACTGTTTATTACTTTGCTATGCAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CAA 90 bp AAATATCTTTGGAATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAGGGTCTTGGGTTGTGTaGATCACATGCTCTGTTATT +
Preference number: 5 (lower is better)
Translates to: KYLWNLIPLEGKALPPRPGSWVV*ITCSVI
Trigger: AATAACAGAGCATGTGATCAACACAACCCAAGACCC...TGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATTCCAAAGATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296529.11
CDS-3UTR CAA 90 bp AACTGCTGTCAGGTGATAAATACTACCAAGGAAGTAATTCCCAACATGTGTTCAGTTACTGTGAAGGTATaGGGTGAGGAGTTGGGACAG +
Preference number: 5 (lower is better)
Translates to: NCCQVINTTKEVIPNMCSVTVKV*GEELGQ
Trigger: CTGTCCCAACTCCTCACCCAATACCTTCACAGTAAC...TGAACACATGTTGGGAATTACTTCCTTGGTAGTATTTATCACCTGACAGCAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS TCA 90 bp CAAGCATTGCAAAAGGCCAAAACTTTGGACAATGTAATATCAGATTaGCAACCAAGGCAACCAACCATATGGCAGCACAAAGAACCCACT +
Preference number: 5 (lower is better)
Translates to: QALQKAKTLDNVISD*QPRQPTIWQHKEPT
Trigger: AGTGGGTTCTTTGTGCTGCCATATGGTTGGTTGCCTTGGTTGTCAATCTGATATTACATTGTCCAAAGTTTTGGCCTTTTGCAATGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000296529.11
ENST00000502698.5
ENST00000503200.5
ENST00000504569.5
ENST00000505049.5
ENST00000505189.5
ENST00000508243.5
ENST00000511532.5
ENST00000512481.5
ENST00000514558.5
ENST00000514971.1
CDS TCA 90 bp GCAAATCACAAACAAGCAAAAACCATCCATTTATCTCAAGCTCTGTaGCTGGCGGAAGTCACAGAAATACCCTGCAGTATTAAAGTGGCA +
Preference number: 5 (lower is better)
Translates to: ANHKQAKTIHLSQAL*LAEVTEIPCSIKVA
Trigger: TGCCACTTTAATACTGCAGGGTATTTCTGTGACTTCCGCCAGTCACAGAGCTTGAGATAAATGGATGGTTTTTGCTTGTTTGTGATTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512272.1
CDS CCA 90 bp ATCACAAACAAGCAAAAACCATCCATTTATCTCAAGCTCTGTGACTaGCGGAAGTCACAGAAATACCCTGCAGTATTAAAGTGGCATCAG +
Preference number: 5 (lower is better)
Translates to: ITNKQKPSIYLKLCD*RKSQKYPAVLKWHQ
Trigger: CTGATGCCACTTTAATACTGCAGGGTATTTCTGTGACTTCCGCCAGTCACAGAGCTTGAGATAAATGGATGGTTTTTGCTTGTTTGTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512272.1
CDS-3UTR CAA 90 bp ATGCATGGTTCTGTACCCATCAATCATGCTGTTTATGGATCTTTAAACTTATTGAGCCAAACCTTGAGCTaGCCCAGCCAGTTAAGGCAT +
Preference number: 5 (lower is better)
Translates to: MHGSVPINHAVYGSLNLLSQTLS*PSQLRH
Trigger: ATGCCTTAACTGGCTGGGCAAGCTCAAGGTTTGGCT...CAATAAGTTTAAAGATCCATAAACAGCATGATTGATGGGTACAGAACCATGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CAA 90 bp AATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCAAGGTATTTCTGCCTAAATCATATTGGCTaGCCCCTGCATATATACTAT +
Preference number: 5 (lower is better)
Translates to: NLIPLEGKALPPRPRYFCLNHIG*PLHIYY
Trigger: ATAGTATATATGCAGGGGCAAGCCAATATGATTTAG...GCAGAAATACCTTGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CAA 90 bp CATAAACTCCATTTTGTTAATGAGGGGCCTGACACAGAGGGCTTAGGAACTTGTATCATAAACTCCATTTaGTTAATGAGGGGCCTGACA +
Preference number: 5 (lower is better)
Translates to: HKLHFVNEGPDTEGLGTCIINSI*LMRGLT
Trigger: TGTCAGGCCCCTCATTAACAAAATGGAGTTTATGAT...ACAAGTTCCTAAGCCCTCTGTGTCAGGCCCCTCATTAACAAAATGGAGTTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CAA 90 bp GGATTAGAGCCTGGGTTCATGACAATGAGGCTTTGCCCTGAAGTCACTTTTGTAAAGTCAAGTTTTCCTTaGGCAATAACGGTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: GLEPGFMTMRLCPEVTFVKSSFP*AITVSF
Trigger: GAAAGAAACCGTTATTGCCAAAGGAAAACTTGACTT...TACAAAAGTGACTTCAGGGCAAAGCCTCATTGTCATGAACCCAGGCTCTAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CAA 90 bp CATAAACTCCATTTTGTTAATGAGGGGCCTGACACAGAGGGCTTAGGAACTTGTCTAAATCATATTGGCTaGCCCCTGCATATATACTAT +
Preference number: 5 (lower is better)
Translates to: HKLHFVNEGPDTEGLGTCLNHIG*PLHIYY
Trigger: ATAGTATATATGCAGGGGCAAGCCAATATGATTTAG...ACAAGTTCCTAAGCCCTCTGTGTCAGGCCCCTCATTAACAAAATGGAGTTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CAA 90 bp TTCCTTAAACATGAAGATACCCCACATTGCAGCTATAAATCCTGGACCAGCAGTTGCCACCTGCTGGTTTaGTCATTGTTAGATTTTAGA +
Preference number: 5 (lower is better)
Translates to: FLKHEDTPHCSYKSWTSSCHLLV*SLLDFR
Trigger: TCTAAAATCTAACAATGACAAAACCAGCAGGTGGCA...ACTGCTGGTCCAGGATTTATAGCTGCAATGTGGGGTATCTTCATGTTTAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511532.5
CDS-3UTR CAA 90 bp AAAGTAGACAGTACTTGTAAGAAAGATGCCACTGAAGTGCGCAAACACATAGTCGTGGCTGAGATCCATTaGCTATATGAAAATGCACTC +
Preference number: 5 (lower is better)
Translates to: KVDSTCKKDATEVRKHIVVAEIH*LYENAL
Trigger: GAGTGCATTTTCATATAGCAAATGGATCTCAGCCAC...GACTATGTGTTTGCGCACTTCAGTGGCATCTTTCTTACAAGTACTGTCTACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511532.5
CDS-3UTR CAA 90 bp AAATATCTTTGGAATCTAATTCCATTAGAAGGTAAGGCTCTCCCTCCTCGCCCATTTAACCCATGCACATaGACTTCAGAGTATACACAC +
Preference number: 5 (lower is better)
Translates to: KYLWNLIPLEGKALPPRPFNPCT*TSEYTH
Trigger: GTGTGTATACTCTGAAGTCAATGTGCATGGGTTAAA...TGGGCGAGGAGGGAGAGCCTTACCTTCTAATGGAATTAGATTCCAAAGATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CAA 90 bp TTCTGTTTTTCACTTCGGGTAGAATGGGATACCAGTTCCTATTCTCATAGGACTTTTCAGGAGCTTCATTaGGAAAAGGCCACTGAATAC +
Preference number: 5 (lower is better)
Translates to: FCFSLRVEWDTSSYSHRTFQELH*EKATEY
Trigger: GTATTCAGTGGCCTTTTCCAAATGAAGCTCCTGAAA...AGTCCTATGAGAATAGGAACTGGTATCCCATTCTACCCGAAGTGAAAAACAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CAA 90 bp GCGTGCATTATGTGTATTATCACACATCTTTATTCATCTAGGTGCAGTCTTCTGAAAAACACCAGAAGTTaGCTCCTGGAAGTGAGCATC +
Preference number: 5 (lower is better)
Translates to: ACIMCIITHLYSSRCSLLKNTRS*LLEVSI
Trigger: GATGCTCACTTCCAGGAGCAAACTTCTGGTGTTTTT...CAGAAGACTGCACCTAGATGAATAAAGATGTGTGATAATACACATAATGCACGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR CAA 90 bp TTCTGTTTTTCACTTCGGGTAGAATGGGATACCAGTTCCTATTCTCATAGGACTTATTGCATGCAGCTCTaGTACATTTCAGAGCATGTG +
Preference number: 5 (lower is better)
Translates to: FCFSLRVEWDTSSYSHRTYCMQL*YISEHV
Trigger: CACATGCTCTGAAATGTACAAGAGCTGCATGCAATA...AGTCCTATGAGAATAGGAACTGGTATCCCATTCTACCCGAAGTGAAAAACAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CAA 90 bp GGAAGTAATTCCCAACATGTGTTCACCATAAATCTCAATTCCTTCTCCTGGCTTTGGTTCACTTTAGACTaGATGTACTTTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: GSNSQHVFTINLNSFSWLWFTLD*MYFSGA
Trigger: AGCTCCTGAAAAGTACATCAAGTCTAAAGTGAACCA...AAGCCAGGAGAAGGAATTGAGATTTATGGTGAACACATGTTGGGAATTACTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509278.5
CDS-3UTR CAA 90 bp CATCATAAGGAGCTCATGATGCATGGTTCTGTACCCATCAATCATGCTGTTTATTGGTTCACTTTAGACTaGATGTACTTTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: HHKELMMHGSVPINHAVYWFTLD*MYFSGA
Trigger: AGCTCCTGAAAAGTACATCAAGTCTAAAGTGAACCA...ATAAACAGCATGATTGATGGGTACAGAACCATGCATCATGAGCTCCTTATGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CAA 90 bp ATGCATGGTTCTGTACCCATCAATCATGCTGTTTATGGATCTTTAAACTTATTGGTTAGGTCTGCTCCATaGTTGCTCATGATTCCAGTC +
Preference number: 5 (lower is better)
Translates to: MHGSVPINHAVYGSLNLLVRSAP*LLMIPV
Trigger: GACTGGAATCATGAGCAACAATGGAGCAGACCTAAC...CAATAAGTTTAAAGATCCATAAACAGCATGATTGATGGGTACAGAACCATGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CAA 90 bp AATAATTGTTTGGATGGGAAGGTGGTGAGCTTAGTAGCTCTTACATGGTGTTCTCCTAAACCAATGGTTTaGATAATTGGGACAACAGCA +
Preference number: 5 (lower is better)
Translates to: NNCLDGKVVSLVALTWCSPKPMV*IIGTTA
Trigger: TGCTGTTGTCCCAATTATCAAAACCATTGGTTTAGG...AGAACACCATGTAAGAGCTACTAAGCTCACCACCTTCCCATCCAAACAATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CAA 90 bp AATAATTGTTTGGATGGGAAGGTGGTGAGCTTAGTAGCTCTTACATGGTGTTCTAATTTAGCAGCGGATTaGATACTTCTTCTGCATCCA +
Preference number: 5 (lower is better)
Translates to: NNCLDGKVVSLVALTWCSNLAAD*ILLLHP
Trigger: TGGATGCAGAAGAAGTATCAAATCCGCTGCTAAATT...AGAACACCATGTAAGAGCTACTAAGCTCACCACCTTCCCATCCAAACAATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CAA 90 bp AAAGTAGACAGTACTTGTAAGAAAGATGCCACTGAAGTGCGCAAACACATAGTCAATTTAGCAGCGGATTaGATACTTCTTCTGCATCCA +
Preference number: 5 (lower is better)
Translates to: KVDSTCKKDATEVRKHIVNLAAD*ILLLHP
Trigger: TGGATGCAGAAGAAGTATCAAATCCGCTGCTAAATT...GACTATGTGTTTGCGCACTTCAGTGGCATCTTTCTTACAAGTACTGTCTACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511532.5
CDS-3UTR CAA 90 bp TTCTGTTTTTCACTTCGGGTAGAATGGGATACCAGTTCCTATTCTCATAGGACTAATTTAGCAGCGGATTaGATACTTCTTCTGCATCCA +
Preference number: 5 (lower is better)
Translates to: FCFSLRVEWDTSSYSHRTNLAAD*ILLLHP
Trigger: TGGATGCAGAAGAAGTATCAAATCCGCTGCTAAATT...AGTCCTATGAGAATAGGAACTGGTATCCCATTCTACCCGAAGTGAAAAACAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CAA 90 bp AATAATTGTTTGGATGGGAAGGTGGTGAGCTTAGTAGCTCTTACATGGTGTTCTCAATTGCAACAAACATaGTACTGGCAGTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: NNCLDGKVVSLVALTWCSQLQQT*YWQFCF
Trigger: GAAACAGAACTGCCAGTACAATGTTTGTTGCAATTG...AGAACACCATGTAAGAGCTACTAAGCTCACCACCTTCCCATCCAAACAATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CAA 90 bp AATAATTGTTTGGATGGGAAGGTGGTGAGCTTAGTAGCTCTTACATGGTGTTCTTTTAACCCATGCACATaGACTTCAGAGTATACACAC +
Preference number: 5 (lower is better)
Translates to: NNCLDGKVVSLVALTWCSFNPCT*TSEYTH
Trigger: GTGTGTATACTCTGAAGTCAATGTGCATGGGTTAAA...AGAACACCATGTAAGAGCTACTAAGCTCACCACCTTCCCATCCAAACAATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CAA 90 bp AATAATTGTTTGGATGGGAAGGTGGTGAGCTTAGTAGCTCTTACATGGTGTTCTATCATAAACTCCATTTaGTTAATGAGGGGCCTGACA +
Preference number: 5 (lower is better)
Translates to: NNCLDGKVVSLVALTWCSIINSI*LMRGLT
Trigger: TGTCAGGCCCCTCATTAACAAAATGGAGTTTATGAT...AGAACACCATGTAAGAGCTACTAAGCTCACCACCTTCCCATCCAAACAATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS-3UTR CAA 90 bp CTCCTGCATAGCAAAGTAATAAACAGTACTATCAGGTGGGAATGGGTAAAATTTCAATTGCAACAAACATaGTACTGGCAGTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: LLHSKVINSTIRWEWVKFQLQQT*YWQFCF
Trigger: GAAACAGAACTGCCAGTACAATGTTTGTTGCAATTG...AAATTTTACCCATTCCCACCTGATAGTACTGTTTATTACTTTGCTATGCAGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296529.11
ENST00000511532.5
CDS CCA 90 bp ATATATACTATCATTTCTTTTGCTGTGGTCCTTGATGTAGATGATTaGCACAAATGTAGATCCATAGAGTACTCCAGATATCACTGCAAG +
Preference number: 5 (lower is better)
Translates to: IYTIISFAVVLDVDD*HKCRSIEYSRYHCK
Trigger: CTTGCAGTGATATCTGGAGTACTCTATGGATCTACATTTGTGCCAATCATCTACATCAAGGACCACAGCAAAAGAAATGATAGTATATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296529.11
ENST00000503404.5
ENST00000511532.5
ENST00000512272.1
CDS-3UTR CAA 90 bp ATGCATGGTTCTGTACCCATCAATCATGCTGTTTATGGATCTTTAAACTTATTGTGGCAAATTATTTTATaGAGAAGGCTCCACAAAGGC +
Preference number: 5 (lower is better)
Translates to: MHGSVPINHAVYGSLNLLWQIIL*RRLHKG
Trigger: GCCTTTGTGGAGCCTTCTCAATAAAATAATTTGCCA...CAATAAGTTTAAAGATCCATAAACAGCATGATTGATGGGTACAGAACCATGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS-3UTR CAA 90 bp GCGCTTTATCAGGTCCCTTTTAAAAGTTGCTCCTGTTTCATTCAGATTTACTATTTAAAGGTCCATGTATaGTTCCTTATGTGTTCTTGC +
Preference number: 5 (lower is better)
Translates to: ALYQVPFKSCSCFIQIYYLKVHV*FLMCSC
Trigger: GCAAGAACACATAAGGAACAATACATGGACCTTTAA...ATAGTAAATCTGAATGAAACAGGAGCAACTTTTAAAAGGGACCTGATAAAGCGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS TCA 72 bp GAGGCAGGTGCTTGCTGTGCGTTCCGGGCTGGCGGCTaGAGCTCCTTCCTACTCAGCGCCGGCGCGATCCGC +
Preference number: 6 (lower is better)
Translates to: EAGACCAFRAGG*SSFLLSAGAIR
Trigger: GCGGATCGCGCCGGCGCTGAGTAGGAAGGAGCTTCAGCCGCCAGCCCGGAACGCACAGCAAGCACCTGCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503200.5
ENST00000514346.5
CDS CCA 72 bp TCAGCGCCGGCGCGATCCGCCCACTACGTGCCAGTGTaGAGCCGGAGCCTGACTCATTCCCTCTACGTGCTG +
Preference number: 6 (lower is better)
Translates to: SAPARSAHYVPV*SRSLTHSLYVL
Trigger: CAGCACGTAGAGGGAATGAGTCAGGCTCCGGCTCCACACTGGCACGTAGTGGGCGGATCGCGCCGGCGCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508243.5
ENST00000512481.5
CDS TCA 72 bp GTACTTTTCAGGAGCTTTGCGTTCCGGGCTGGCGGCTaGAGCTCCTTCCTACTCAGCGCCGGCGCGATCCGC +
Preference number: 6 (lower is better)
Translates to: VLFRSFAFRAGG*SSFLLSAGAIR
Trigger: GCGGATCGCGCCGGCGCTGAGTAGGAAGGAGCTTCAGCCGCCAGCCCGGAACGCAAAGCTCCTGAAAAGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504569.5
CDS GCA 72 bp TACGTGCTGGGGGCGGCCTGGCCAGCCTTTACTTTCTaGGGGGACAATTTCCCATACACCGGCCGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: YVLGAAWPAFTF*GDNFPYTGREE
Trigger: CTCCTCCCGGCCGGTGTATGGGAAATTGTCCCCGCAGAAAGTAAAGGCTGGCCAGGCCGCCCCCAGCACGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508243.5
CDS TCA 72 bp GAAAAGCTAACCTATGATGCGTTCCGGGCTGGCGGCTaGAGCTCCTTCCTACTCAGCGCCGGCGCGATCCGC +
Preference number: 6 (lower is better)
Translates to: EKLTYDAFRAGG*SSFLLSAGAIR
Trigger: GCGGATCGCGCCGGCGCTGAGTAGGAAGGAGCTTCAGCCGCCAGCCCGGAACGCATCATAGGTTAGCTTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296529.11
ENST00000509278.5
ENST00000512481.5
ENST00000513744.5
CDS TCA 72 bp TGTCTTGAAAAGCTAACTGCGTTCCGGGCTGGCGGCTaGAGCTCCTTCCTACTCAGCGCCGGCGCGATCCGC +
Preference number: 6 (lower is better)
Translates to: CLEKLTAFRAGG*SSFLLSAGAIR
Trigger: GCGGATCGCGCCGGCGCTGAGTAGGAAGGAGCTTCAGCCGCCAGCCCGGAACGCAGTTAGCTTTTCAAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508243.5
CDS CCA 72 bp TTTCCTTTGAGTGGCTGTACTCACTGCGTTCCGGGCTaGCGGCTGAAGCTCCTTCCTACTCAGCGCCGGCGC +
Preference number: 6 (lower is better)
Translates to: FPLSGCTHCVPG*RLKLLPTQRRR
Trigger: GCGCCGGCGCTGAGTAGGAAGGAGCTTCAGCCGCCAGCCCGGAACGCAGTGAGTACAGCCACTCAAAGGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS CAA 90 bp CAGACTCCCGTTCCCAGGGTGCTCGCGAAGAGCGCCAATCCAGCCTaGACTTCCTGCTGGGACGTTTACCTCCACTTAAGGAGGGTGGAG +
Preference number: 6 (lower is better)
Translates to: QTPVPRVLAKSANPA*TSCWDVYLHLRRVE
Trigger: CTCCACCCTCCTTAAGTGGAGGTAAACGTCCCAGCAGGAAGTCAAGGCTGGATTGGCGCTCTTCGCGAGCACCCTGGGAACGGGAGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508243.5
CDS TCA 72 bp TTTCAGGAGCTTATGGGTTATGGCTCAAGGGTCAGCTaGGGCAGGTGCTTGCTGTGCGTTCCGGGCTGGCGG +
Preference number: 6 (lower is better)
Translates to: FQELMGYGSRVS*GRCLLCVPGWR
Trigger: CCGCCAGCCCGGAACGCACAGCAAGCACCTGCCTCAGCTGACCCTTGAGCCATAACCCATAAGCTCCTGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503200.5
CDS CCA 72 bp AGCCTGACTCATTCCCTCTACGTGCTGGGGGCGGCCTaGCCAGCCTTTACTTTCTGCGGGGACAATTTCCCA +
Preference number: 6 (lower is better)
Translates to: SLTHSLYVLGAA*PAFTFCGDNFP
Trigger: TGGGAAATTGTCCCCGCAGAAAGTAAAGGCTGGCCAGGCCGCCCCCAGCACGTAGAGGGAATGAGTCAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508243.5
CDS CCA 72 bp ACGCTCCCCTGCAAAGCGACTTGGCTTTCCTTTGAGTaGCTGTACTCACTGCGTTCCGGGCTGGCGGCTGAA +
Preference number: 6 (lower is better)
Translates to: TLPCKATWLSFE*LYSLRSGLAAE
Trigger: TTCAGCCGCCAGCCCGGAACGCAGTGAGTACAGCCACTCAAAGGAAAGCCAAGTCGCTTTGCAGGGGAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS CAA 72 bp ATGAGACGCTCCCCTGCAAAGCGACTTGGCTTTCCTTaGAGTGGCTGTACTCACTGCGTTCCGGGCTGGCGG +
Preference number: 6 (lower is better)
Translates to: MRRSPAKRLGFP*SGCTHCVPGWR
Trigger: CCGCCAGCCCGGAACGCAGTGAGTACAGCCACTCAAAGGAAAGCCAAGTCGCTTTGCAGGGGAGCGTCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS GCA 72 bp GTGCTCGCGAAGAGCGCCAATCCAGCCTTGACTTCCTaGTGGGACGTTTACCTCCACTTAAGGAGGGTGGAG +
Preference number: 6 (lower is better)
Translates to: VLAKSANPALTS*WDVYLHLRRVE
Trigger: CTCCACCCTCCTTAAGTGGAGGTAAACGTCCCAGCAGGAAGTCAAGGCTGGATTGGCGCTCTTCGCGAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508243.5
CDS CAA 72 bp GTTCCCAGGGTGCTCGCGAAGAGCGCCAATCCAGCCTaGACTTCCTGCTGGGACGTTTACCTCCACTTAAGG +
Preference number: 6 (lower is better)
Translates to: VPRVLAKSANPA*TSCWDVYLHLR
Trigger: CCTTAAGTGGAGGTAAACGTCCCAGCAGGAAGTCAAGGCTGGATTGGCGCTCTTCGCGAGCACCCTGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508243.5
CDS GCA 72 bp AAGCGACTTGGCTTTCCTTTGAGTGGCTGTACTCACTaGGTTCCGGGCTGGCGGCTGAAGCTCCTTCCTACT +
Preference number: 6 (lower is better)
Translates to: KRLGFPLSGCTH*VPGWRLKLLPT
Trigger: AGTAGGAAGGAGCTTCAGCCGCCAGCCCGGAACGCAGTGAGTACAGCCACTCAAAGGAAAGCCAAGTCGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS CCA 72 bp CTCGCGAAGAGCGCCAATCCAGCCTTGACTTCCTGCTaGGACGTTTACCTCCACTTAAGGAGGGTGGAGAAA +
Preference number: 6 (lower is better)
Translates to: LAKSANPALTSC*DVYLHLRRVEK
Trigger: TTTCTCCACCCTCCTTAAGTGGAGGTAAACGTCCCAGCAGGAAGTCAAGGCTGGATTGGCGCTCTTCGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508243.5
CDS CCA 72 bp GTAGCTGATGGTGGGAGATCTCAGGCCTTCTTGACATaGGCCTCACCACAGGACTGCTTGTCTCATGGAATG +
Preference number: 6 (lower is better)
Translates to: VADGGRSQAFLT*ASPQDCLSHGM
Trigger: CATTCCATGAGACAAGCAGTCCTGTGGTGAGGCCCATGTCAAGAAGGCCTGAGATCTCCCACCATCAGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505049.5
ENST00000505189.5
CDS TCA 72 bp CTACTGTTAGGCTCAAAGAGAGGTTCAGCCCTGCAGTaGCTTACATGGGTTATGGCTCAAGGGTCAGCTGAG +
Preference number: 6 (lower is better)
Translates to: LLLGSKRGSALQ*LTWVMAQGSAE
Trigger: CTCAGCTGACCCTTGAGCCATAACCCATGTAAGTCACTGCAGGGCTGAACCTCTCTTTGAGCCTAACAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513744.5
ENST00000514558.5
CDS CCA 72 bp CTGAAAAATCATGAGACGCTCCCCTGCAAAGCGACTTaGCTTTCCTTTGAGTGGCTGTACTCACTGCGTTCC +
Preference number: 6 (lower is better)
Translates to: LKNHETLPCKAT*LSFEWLYSLRS
Trigger: GGAACGCAGTGAGTACAGCCACTCAAAGGAAAGCCAAGTCGCTTTGCAGGGGAGCGTCTCATGATTTTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS GCA 72 bp ATGAGCACGTTTCTGAAAAATCATGAGACGCTCCCCTaGAAAGCGACTTGGCTTTCCTTTGAGTGGCTGTAC +
Preference number: 6 (lower is better)
Translates to: MSTFLKNHETLP*KATWLSFEWLY
Trigger: GTACAGCCACTCAAAGGAAAGCCAAGTCGCTTTGCAGGGGAGCGTCTCATGATTTTTCAGAAACGTGCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS CCA 72 bp GTGATGAAACCCTGCATCGTCCTTCTCCATCTCACCTaGAACGTGAATGATCCCTATGTCCAGCCTATTCAT +
Preference number: 6 (lower is better)
Translates to: VMKPCIVLLHLT*NVNDPYVQPIH
Trigger: ATGAATAGGCTGGACATAGGGATCATTCACGTTCCAGGTGAGATGGAGAAGGACGATGCAGGGTTTCATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503404.5
CDS TCA 72 bp ACCTCCTTCCCCGAGTTGCTAAATGATCCTACAGACTaGGTGTATCTGCTGCTCATTTTGAGGATCTGTGAC +
Preference number: 6 (lower is better)
Translates to: TSFPELLNDPTD*VYLLLILRICD
Trigger: GTCACAGATCCTCAAAATGAGCAGCAGATACACTCAGTCTGTAGGATCATTTAGCAACTCGGGGAAGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505049.5
ENST00000505189.5
CDS TCA 72 bp ACCTCCTTCCCCGAGTTGCTAAATGATCCTACAGACTaGGTGTATCTGCTGCTCATTTTGAGGATCTCTGTG +
Preference number: 6 (lower is better)
Translates to: TSFPELLNDPTD*VYLLLILRISV
Trigger: CACAGAGATCCTCAAAATGAGCAGCAGATACACTCAGTCTGTAGGATCATTTAGCAACTCGGGGAAGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511038.5
CDS CCA 72 bp ATAGGTTTGGTACTATCTGTGGTTTCAGGCATTCCTTaGGTGTCTTGGAACATATTCCCTGTGGATAAGGGG +
Preference number: 6 (lower is better)
Translates to: IGLVLSVVSGIP*VSWNIFPVDKG
Trigger: CCCCTTATCCACAGGGAATATGTTCCAAGACACCCAAGGAATGCCTGAAACCACAGATAGTACCAAACCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503404.5
CDS CAA 90 bp CACTTACTACTGATAGCCCAGCTCCAATGTAATTTAGCAGCGGATTaGATACTTCTTCTGCATCCAATCCAAACCAGCCAAACCTTGAGC +
Preference number: 6 (lower is better)
Translates to: HLLLIAQLQCNLAAD*ILLLHPIQTSQTLS
Trigger: GCTCAAGGTTTGGCTGGTTTGGATTGGATGCAGAAGAAGTATCAAATCCGCTGCTAAATTACATTGGAGCTGGGCTATCAGTAGTAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296529.11
ENST00000508243.5
ENST00000511532.5
ENST00000514558.5
CDS CAA 90 bp GCGGTGGTGTACTGTAGAAAGTTTATCCACCCAGGAACAGGGGTCTaGGGTTGTGTTGATCACCTATTGAAAACATTGGCCCAAATTAAA +
Preference number: 6 (lower is better)
Translates to: AVVYCRKFIHPGTGV*GCVDHLLKTLAQIK
Trigger: TTTAATTTGGGCCAATGTTTTCAATAGGTGATCAACACAACCCAAGACCCCTGTTCCTGGGTGGATAAACTTTCTACAGTACACCACCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503404.5
CDS TCA 72 bp AAGCTAACCTATGACCTCCTTCCCCGAGTTGCTAAATaGTCCTACAGACTGAGTGTATCTGCTGCTCATTTT +
Preference number: 6 (lower is better)
Translates to: KLTYDLLPRVAK*SYRLSVSAAHF
Trigger: AAAATGAGCAGCAGATACACTCAGTCTGTAGGATCATTTAGCAACTCGGGGAAGGAGGTCATAGGTTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505049.5
ENST00000505189.5
ENST00000511038.5
CDS GCA 72 bp AGCGTCTTTCCACAATGCCATCTTGGATTCATATTTTaGACACTGGCCCTTTGGAATAAGCCCTATGGGTTA +
Preference number: 6 (lower is better)
Translates to: SVFPQCHLGFIF*TLALWNKPYGL
Trigger: TAACCCATAGGGCTTATTCCAAAGGGCCAGTGTGCAAAATATGAATCCAAGATGGCATTGTGGAAAGACGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000505189.5
ENST00000511038.5
ENST00000512481.5
ENST00000514346.5
CDS GCA 72 bp AGCGTCTTTCCACAATGCCATCTTGGATTCATATTTTaGACACTGGCCCTTTGGAATAAGCCCTCTGGAATA +
Preference number: 6 (lower is better)
Translates to: SVFPQCHLGFIF*TLALWNKPSGI
Trigger: TATTCCAGAGGGCTTATTCCAAAGGGCCAGTGTGCAAAATATGAATCCAAGATGGCATTGTGGAAAGACGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS CAA 72 bp CCCCAGATTAAGATTCCAAGGCCTAAACCAATGGTTTaGATAATTGGGACAACAGCAATGTTCCCTGTTGCC +
Preference number: 6 (lower is better)
Translates to: PQIKIPRPKPMV*IIGTTAMFPVA
Trigger: GGCAACAGGGAACATTGCTGTTGTCCCAATTATCAAAACCATTGGTTTAGGCCTTGGAATCTTAATCTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296529.11
ENST00000503200.5
ENST00000504569.5
ENST00000508243.5
ENST00000511532.5
ENST00000514558.5
CDS CAA 72 bp TACTGTAGAAAGTTTATCCACCCAGGAACAGGGGTCTaGGGTTGTGTTGATCACCTATTGAAAACATTGGCC +
Preference number: 6 (lower is better)
Translates to: YCRKFIHPGTGV*GCVDHLLKTLA
Trigger: GGCCAATGTTTTCAATAGGTGATCAACACAACCCAAGACCCCTGTTCCTGGGTGGATAAACTTTCTACAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503404.5
CDS CAA 90 bp CCAAGCATTGCAAAAGGCCAAAACTTTGGACAATGTAATATCAGATaGACAACCAAGGCAACCAACCATATGGCAGCACAAAGAACCCAC +
Preference number: 6 (lower is better)
Translates to: PSIAKGQNFGQCNIR*TTKATNHMAAQRTH
Trigger: GTGGGTTCTTTGTGCTGCCATATGGTTGGTTGCCTTGGTTGTCAATCTGATATTACATTGTCCAAAGTTTTGGCCTTTTGCAATGCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000296529.11
ENST00000502698.5
ENST00000503200.5
ENST00000504569.5
ENST00000505049.5
ENST00000505189.5
ENST00000508243.5
ENST00000511532.5
ENST00000512481.5
ENST00000514558.5
ENST00000514971.1
CDS TCA 72 bp ATGATCCTACAGACTGAGTGTATCTGCTGCTCATTTTaGGGATCTGTGACTGACAAATTGGCTGTAGCTGAT +
Preference number: 6 (lower is better)
Translates to: MILQTECICCSF*GSVTDKLAVAD
Trigger: ATCAGCTACAGCCAATTTGTCAGTCACAGATCCTCAAAATGAGCAGCAGATACACTCAGTCTGTAGGATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505049.5
ENST00000505189.5
CDS CCA 72 bp ACTGTAGAAAGTTTATCCACCCAGGAACAGGGGTCTTaGGTTGTGTTGATCACATGCTCTGTTATTAATGGA +
Preference number: 6 (lower is better)
Translates to: TVESLSTQEQGS*VVLITCSVING
Trigger: TCCATTAATAACAGAGCATGTGATCAACACAACCCAAGACCCCTGTTCCTGGGTGGATAAACTTTCTACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296529.11
CDS CCA 72 bp TGCAAGACTGCAGCCCATGCTCTGTTATTAATGGAGTaGTATCCATGGAACACGTGTTATTTGGTATTTCAC +
Preference number: 6 (lower is better)
Translates to: CKTAAHALLLME*YPWNTCYLVFH
Trigger: GTGAAATACCAAATAACACGTGTTCCATGGATACCACTCCATTAATAACAGAGCATGGGCTGCAGTCTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511532.5
CDS CCA 72 bp AAGCAAAAACCATCCATTTATCTCAAGCTCTGTGACTaGCGGAAGTCACAGAAATACCCTGCAGTATTAAAG +
Preference number: 6 (lower is better)
Translates to: KQKPSIYLKLCD*RKSQKYPAVLK
Trigger: CTTTAATACTGCAGGGTATTTCTGTGACTTCCGCCAGTCACAGAGCTTGAGATAAATGGATGGTTTTTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512272.1
CDS CAA 90 bp TTAAATGATCCCCAGATTAAGATTCCAAGGCCTAAACCAATGGTTTaGATAATTGGGACAACAGCAATGTTCCCTGTTGCCCAAATGCAG +
Preference number: 6 (lower is better)
Translates to: LNDPQIKIPRPKPMV*IIGTTAMFPVAQMQ
Trigger: CTGCATTTGGGCAACAGGGAACATTGCTGTTGTCCCAATTATCAAAACCATTGGTTTAGGCCTTGGAATCTTAATCTGGGGATCATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296529.11
ENST00000503200.5
ENST00000504569.5
ENST00000508243.5
ENST00000511532.5
ENST00000514558.5
CDS CAA 90 bp GTAGCTGTCTTAGTGATCAGATACAAAGACATACTATATATAGGTTaGGTACTATCTGTGGTTTCAGGCATTCCTTGGGTGTCTTGGAAC +
Preference number: 6 (lower is better)
Translates to: VAVLVIRYKDILYIG*VLSVVSGIPWVSWN
Trigger: GTTCCAAGACACCCAAGGAATGCCTGAAACCACAGATAGTACCAAACCTATATATAGTATGTCTTTGTATCTGATCACTAAGACAGCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503404.5
CDS GCA 72 bp GTTTCAAATCAAGTTGTCTCTCATACTATACTCACATaGTCTGTTATTAATGGAGTGGTATCCATGGAACAC +
Preference number: 6 (lower is better)
Translates to: VSNQVVSHTILT*SVINGVVSMEH
Trigger: GTGTTCCATGGATACCACTCCATTAATAACAGAGCATGTGAGTATAGTATGAGAGACAACTTGATTTGAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS CCA 72 bp ATCATTTCTTTTGCTGTGGTCCTTGATGTAGATGATTaGCACAAATGTAGATCCATAGAGTACTCCAGATAT +
Preference number: 6 (lower is better)
Translates to: IISFAVVLDVDD*HKCRSIEYSRY
Trigger: ATATCTGGAGTACTCTATGGATCTACATTTGTGCCAATCATCTACATCAAGGACCACAGCAAAAGAAATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296529.11
ENST00000503404.5
ENST00000511532.5
ENST00000512272.1
CDS CCA 72 bp CTCATACTATACTCACATGCTCTGTTATTAATGGAGTaGTATCCATGGAACACGTGTTATTTGGTATTTCAC +
Preference number: 6 (lower is better)
Translates to: LILYSHALLLME*YPWNTCYLVFH
Trigger: GTGAAATACCAAATAACACGTGTTCCATGGATACCACTCCATTAATAACAGAGCATGTGAGTATAGTATGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514558.5
CDS CAA 90 bp TGCAAGACTGCAGCCCCTTACAAAACAAATAAATCACTATTAATCTaGGCTCAAAGCAGTATTTCTGACAAACGCACAAATGGAATCATA +
Preference number: 6 (lower is better)
Translates to: CKTAAPYKTNKSLLI*AQSSISDKRTNGII
Trigger: TATGATTCCATTTGTGCGTTTGTCAGAAATACTGCTTTGAGCCAAGATTAATAGTGATTTATTTGTTTTGTAAGGGGCTGCAGTCTTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512272.1
CDS TCA 72 bp TCAACTGTTTCTAATTGTTTCCTCTTTCATTTAGGATaGCTTGGCAGTTGGCAAGTCTTCCATTTCAAATTC +
Preference number: 6 (lower is better)
Translates to: STVSNCFLFHLG*LGSWQVFHFKF
Trigger: GAATTTGAAATGGAAGACTTGCCAACTGCCAAGTCATCCTAAATGAAAGAGGAAACAATTAGAAACAGTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503404.5
CDS TCA 72 bp AGTACCGCCTGTCTTTGGGCTAAAATTAACAGTGCTTaGATGTATTTATTCCGAGCCTTGATTTTTCTTTTT +
Preference number: 6 (lower is better)
Translates to: STACLWAKINSA*MYLFRALIFLF
Trigger: AAAAAGAAAAATCAAGGCTCGGAATAAATACATTCAAGCACTGTTAATTTTAGCCCAAAGACAGGCGGTACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514558.5