RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM143 (Homo sapiens)

Ensembl gene IDs: ENSG00000161558

Ensembl transcript IDs: ENST00000293261.8, ENST00000377431.6, ENST00000435956.7, ENST00000593914.5, ENST00000595720.5, ENST00000597370.5, ENST00000598012.1, ENST00000598258.5, ENST00000598926.5, ENST00000599220.1, ENST00000600816.1, ENST00000601332.5, ENST00000601522.1

Found 497 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATAAGGCCTGCAGCCGGGCCAGGATTTGGTGGTAGTGGAACAGGGTaGAGAAGTCCACGTGGGCCGAGAACGCCTCCAAAGCCGCCTTCT +
Preference number: 1 (lower is better)
Translates to: IRPAAGPGFGGSGTG*RSPRGPRTPPKPPS
Trigger: AGAAGGCGGCTTTGGAGGCGTTCTCGGCCCACGTGGACTTCTGCACCCTGTTCCACTACCACCAAATCCTGGCCCGGCTGCAGGCCTTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599220.1
3UTR GCA 90 bp CGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTaGCAGGAGGCAGGGCTAACGGCCTTGGTGCACATGATGGGCAGT +
Preference number: 1 (lower is better)
Translates to: RLPKVDGTQQLSLDV*QEAGLTALVHMMGS
Trigger: ACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR CCA 90 bp AAGGCACCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTaGCGAGGGTGGTTTCTGGTTCACCTACCTAGCACAAGGTCTCCA +
Preference number: 1 (lower is better)
Translates to: KAPEVAGSQVGSESW*RGWFLVHLPSTRSP
Trigger: TGGAGACCTTGTGCTAGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR CCA 90 bp AGGAAGGCACCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTaGTGGCGAGGGTGGTTTCTGGTTCACCTACCTAGCACAAGGTCT +
Preference number: 1 (lower is better)
Translates to: RKAPEVAGSQVGSES*WRGWFLVHLPSTRS
Trigger: AGACCTTGTGCTAGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTGCCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR CCA 90 bp CCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTCTaGTTCACCTACCTAGCACAAGGTCTCCAACTCCTTCAGCCTAGA +
Preference number: 1 (lower is better)
Translates to: PGARLGASLGGEGGF*FTYLAQGLQLLQPR
Trigger: TCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR CCA 90 bp GAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTaGTTTCTGGTTCACCTACCTAGCACAAGGTCTCCAACTCCTTCA +
Preference number: 1 (lower is better)
Translates to: EVAGSQVGSESWWRG*FLVHLPSTRSPTPS
Trigger: TGAAGGAGTTGGAGACCTTGTGCTAGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR TCA 90 bp TTCTTATTGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTaGTGGAACCCAGCAGCTGTCACTGGACGTTTGCCAGGAGGCAGG +
Preference number: 1 (lower is better)
Translates to: FLLVPSLQRQPAAQS*WNPAAVTGRLPGGR
Trigger: CCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR TCA 90 bp ACCTCCTGCTCATTAGACAGACGCTGGGGATCCGTTAGTGATGGCTaGTCGAGGGTCTCCCTGTCAGGGTTGATGGGGTCATATAAGGCC +
Preference number: 1 (lower is better)
Translates to: TSCSLDRRWGSVSDG*SRVSLSGLMGSYKA
Trigger: GGCCTTATATGACCCCATCAACCCTGACAGGGAGACCCTCGATCAGCCATCACTAACGGATCCCCAGCGTCTGTCTAATGAGCAGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597370.5
3UTR TCA 90 bp AACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCTGTaGTTGGCAGACACCCTCAGCTCCTCAGCCAAACCACACTTGGAT +
Preference number: 1 (lower is better)
Translates to: NSSTWRFTEARAEQL*LADTLSSSAKPHLD
Trigger: ATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAATCACAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR GCA 90 bp CCTTTAGAAATTCTTATTGGTTCCTTCCCTGCAGCGACAACCGGCTaGCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGCC +
Preference number: 1 (lower is better)
Translates to: PLEILIGSFPAATTG*PKLMEPSSCHWTFA
Trigger: GGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATTTCTAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR TCA 90 bp GAAGTTGGAGTGAAAAGTATAATAACCGTAATTGACAGCCTGTCGTaGAGGAGGCGGGGCTTAGTTCCTAGCCTGCTGACTGGGCAGGGA +
Preference number: 1 (lower is better)
Translates to: EVGVKSIITVIDSLS*RRRGLVPSLLTGQG
Trigger: TCCCTGCCCAGTCAGCAGGCTAGGAACTAAGCCCCGCCTCCTTCACGACAGGCTGTCAATTACGGTTATTATACTTTTCACTCCAACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR TCA 90 bp CACAAGGTCTCCAACTCCTTCAGCCTAGACACCCTGATCAGCAGCTaGCCAGTTGGCCTGCCATTTAAGCAGCAGCAATTGATAGCAAGA +
Preference number: 1 (lower is better)
Translates to: HKVSNSFSLDTLISS*PVGLPFKQQQLIAR
Trigger: TCTTGCTATCAATTGCTGCTGCTTAAATGGCAGGCCAACTGGTCAGCTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR CCA 90 bp AGCTGTGATTGGCAGACACCCTCAGCTCCTCAGCCAAACCACACTTaGATGTTTATGGTGAGGGTGGGACTAAGAAATGGAACAGAAGCA +
Preference number: 1 (lower is better)
Translates to: SCDWQTPSAPQPNHT*MFMVRVGLRNGTEA
Trigger: TGCTTCTGTTCCATTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAATCACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR GCA 90 bp ACAACTGCTAGCTGCTTTGATTGGCTGCTTTGCTTAAGCACACAGTaGAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTGAA +
Preference number: 1 (lower is better)
Translates to: TTASCFDWLLCLSTQ*SKNNHLSVIGSWSE
Trigger: TTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAAGCAAAGCAGCCAATCAAAGCAGCTAGCAGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR TCA 90 bp CCAGCGCGTAGGCCAGGGTGTCCTCAGACAGCGGGGAGAAGTTGGCCTGGGCCAAGCTGGAGAATTGCTTaGACCAGGGAGGCGGAGGCT +
Preference number: 2 (lower is better)
Translates to: PARRPGCPQTAGRSWPGPSWRIA*TREAEA
Trigger: AGCCTCCGCCTCCCTGGTTCAAGCAATTCTCCAGCT...TGGCCCAGGCCAACTTCTCCCCGCTGTCTGAGGACACCCTGGCCTACGCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597370.5
3UTR CAA 90 bp GAAAGACCTGGGCGAGGAAGGCACCTGAGGTTGCCGGGAGCCAGGTaGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTCTGGTTCACCTAC +
Preference number: 2 (lower is better)
Translates to: ERPGRGRHLRLPGAR*GASLGGEGGFWFTY
Trigger: GTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTGCCTTCCTCGCCCAGGTCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR TCA 90 bp CCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTAGAGCTGAGCAGCTGTaGTTGGCAGACACCCTCAGC +
Preference number: 2 (lower is better)
Translates to: PEVAGSQVGSESWWRGWFRAEQL*LADTLS
Trigger: GCTGAGGGTGTCTGCCAATCACAGCTGCTCAGCTCT...AAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR TCA 90 bp CAGCGCGTAGGCCAGGGTGTCCTCAGACAGCGGGGAGAAGTTGGCCTGGGCCAGTCTCCCTGTCAGGGTTaGTGGGGTCATATAAGGCCT +
Preference number: 2 (lower is better)
Translates to: QRVGQGVLRQRGEVGLGQSPCQG*WGHIRP
Trigger: AGGCCTTATATGACCCCATCAACCCTGACAGGGAGA...CTGGCCCAGGCCAACTTCTCCCCGCTGTCTGAGGACACCCTGGCCTACGCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597370.5
3UTR-3UTR GCA 90 bp CCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTCTGTCACTGGACGTTTaGCAGGAGGCAGGGCTAACG +
Preference number: 2 (lower is better)
Translates to: PEVAGSQVGSESWWRGWFLSLDV*QEAGLT
Trigger: CGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAG...AAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CCA 90 bp ATTTACTGTCACCTGGACCTCATCCTGAGGGTGGTGGACCACCAGCGCGTAGGCGGGGAGAAGTTGGCCTaGGCCAGCAGGGGCTCCAGA +
Preference number: 2 (lower is better)
Translates to: IYCHLDLILRVVDHQRVGGEKLA*ASRGSR
Trigger: TCTGGAGCCCCTGCTGGCCCAGGCCAACTTCTCCCC...GCCTACGCGCTGGTGGTCCACCACCCTCAGGATGAGGTCCAGGTGACAGTAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597370.5
3UTR CAA 90 bp TTCTGTAGAAAGGGTGAAAGACCTGGGCGAGGAAGGCACCTGAGGTaGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGT +
Preference number: 2 (lower is better)
Translates to: FCRKGERPGRGRHLR*PGARLGASLGGEGG
Trigger: ACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTGCCTTCCTCGCCCAGGTCTTTCACCCTTTCTACAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR TCA 90 bp CCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTACCCTGATCAGCAGCTaGCCAGTTGGCCTGCCATTT +
Preference number: 2 (lower is better)
Translates to: PEVAGSQVGSESWWRGWFTLISS*PVGLPF
Trigger: AAATGGCAGGCCAACTGGTCAGCTGCTGATCAGGGT...AAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR TCA 90 bp ACAGACGCTGGGGATCCGTTAGTGATGGCTGATCGAGGGTCTCCCTGTCAGGGTAGGCGGAGGCTGCAGTaGGTCGAGATCGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: TDAGDPLVMADRGSPCQGRRRLQ*VEIVPL
Trigger: CAGTGGCACGATCTCGACTCACTGCAGCCTCCGCCT...ACCCTGACAGGGAGACCCTCGATCAGCCATCACTAACGGATCCCCAGCGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597370.5
3UTR-3UTR TCA 90 bp GCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTCGGCCTTGGTGCACATaGTGGGCAGTTTGCCCGGAG +
Preference number: 2 (lower is better)
Translates to: ATTGCPKLMEPSSCHWTFRPWCT*WAVCPE
Trigger: CTCCGGGCAAACTGCCCATCATGTGCACCAAGGCCG...AAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR GCA 90 bp TCCCTGTCAGGGTTGATGGGGTCATATAAGGCCTGCAGCCGGGCCAGGATTTGGGGTAGTGGAACAGGGTaGAGAAGTCCACGTGGGCCG +
Preference number: 2 (lower is better)
Translates to: SLSGLMGSYKACSRARIWGSGTG*RSPRGP
Trigger: CGGCCCACGTGGACTTCTGCACCCTGTTCCACTACC...CCAAATCCTGGCCCGGCTGCAGGCCTTATATGACCCCATCAACCCTGACAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599220.1
3UTR-3UTR GCA 90 bp TGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTaGCAGGAGGCAGGGCTAACG +
Preference number: 2 (lower is better)
Translates to: WFLPCSDNRLPKVDGTQQLSLDV*QEAGLT
Trigger: CGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAG...CTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR GCA 90 bp ATTTACTGTCACCTGGACCTCATCCTGAGGGTGGTGGACCACCAGCGCGTAGGCGCCCGAAGCACCTCCTaGTCATTAGACAGACGCTGG +
Preference number: 2 (lower is better)
Translates to: IYCHLDLILRVVDHQRVGARSTS*SLDRRW
Trigger: CCAGCGTCTGTCTAATGAGCAGGAGGTGCTTCGGGC...GCCTACGCGCTGGTGGTCCACCACCCTCAGGATGAGGTCCAGGTGACAGTAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597370.5
3UTR-3UTR TCA 90 bp AACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGCCAGAGAGCTGAGCAGCTGTaGTTGGCAGACACCCTCAGC +
Preference number: 2 (lower is better)
Translates to: NRLPKVDGTQQLSLDVCQRAEQL*LADTLS
Trigger: GCTGAGGGTGTCTGCCAATCACAGCTGCTCAGCTCT...CTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CCA 90 bp CACCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTGCTAGCTGCTTTGATTaGCTGCTTTGCTTAAGCACA +
Preference number: 2 (lower is better)
Translates to: HLRLPGARLGASLGGEGGASCFD*LLCLST
Trigger: TGTGCTTAAGCAAAGCAGCCAATCAAAGCAGCTAGC...ACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CCA 90 bp TGGTGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTTGCCGGGAGCCAGGTTaGGAGCGAGTCTTGGTGGCG +
Preference number: 2 (lower is better)
Translates to: WWWGDPDRGSFCRKGERPCREPG*ERVLVA
Trigger: CGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCA...AGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR TCA 90 bp AACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGCCAGATTGACAGCCTGTCGTaGAGGAGGCGGGGCTTAGTT +
Preference number: 2 (lower is better)
Translates to: NRLPKVDGTQQLSLDVCQIDSLS*RRRGLV
Trigger: AACTAAGCCCCGCCTCCTTCACGACAGGCTGTCAAT...CTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR TCA 90 bp GCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTATTGACAGCCTGTCGTaGAGGAGGCGGGGCTTAGTT +
Preference number: 2 (lower is better)
Translates to: ATTGCPKLMEPSSCHWTFIDSLS*RRRGLV
Trigger: AACTAAGCCCCGCCTCCTTCACGACAGGCTGTCAAT...AAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR TCA 90 bp CACCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTATAATAACCGTAATTaGCAGCCTGTCGTGAAGGAG +
Preference number: 2 (lower is better)
Translates to: HLRLPGARLGASLGGEGGYNNRN*QPVVKE
Trigger: CTCCTTCACGACAGGCTGTCAATTACGGTTATTATA...ACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR TCA 90 bp CCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTAGAGCTAAATCGCTTTaGTTGGCTGTTCATCGAAGG +
Preference number: 2 (lower is better)
Translates to: PEVAGSQVGSESWWRGWFRAKSL*LAVHRR
Trigger: CCTTCGATGAACAGCCAATCAAAGCGATTTAGCTCT...AAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR TCA 90 bp TGGTGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTCGGCCTTGGTGCACATaGTGGGCAGTTTGCCCGGAG +
Preference number: 2 (lower is better)
Translates to: WWWGDPDRGSFCRKGERPRPWCT*WAVCPE
Trigger: CTCCGGGCAAACTGCCCATCATGTGCACCAAGGCCG...AGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR CAA 90 bp ATTCTTATTGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTaGATGGAACCCAGCAGCTGTCACTGGACGTTTGCCAGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: ILIGSFPAATTGCPK*MEPSSCHWTFARRQ
Trigger: CTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR TCA 90 bp ATTTACTGTCACCTGGACCTCATCCTGAGGGTGGTGGACCACCAGCGCGTAGGCAGGCAGTGGATCACTTaGAGTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: IYCHLDLILRVVDHQRVGRQWIT*SQEFKT
Trigger: GGTCTTGAACTCCTGACTTCAAGTGATCCACTGCCT...GCCTACGCGCTGGTGGTCCACCACCCTCAGGATGAGGTCCAGGTGACAGTAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597370.5
3UTR-3UTR GCA 90 bp TGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTGGGTATTGGTTCCTTCCCTaGAGCGACAACCGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: WWGDPDRGSFCRKGERPGYWFLP*SDNRLP
Trigger: GGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATA...CCCAGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR GCA 90 bp AGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTCTGGTTCACCTACCTGCTGACCAGTTGGCCTaGCATTTAAGCAGCAGCAAT +
Preference number: 2 (lower is better)
Translates to: SQVGSESWWRGWFLVHLPADQLA*HLSSSN
Trigger: ATTGCTGCTGCTTAAATGGCAGGCCAACTGGTCAGC...AGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CCA 90 bp GGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCCAGCCAAACCACACTTaGATGTTTATGGTGAGGGTG +
Preference number: 2 (lower is better)
Translates to: GSFPAATTGCPKLMEPSSQPNHT*MFMVRV
Trigger: CACCCTCACCATAAACATCCAAGTGTGGTTTGGCTG...GCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CCA 90 bp CACCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTTAGAAATTCTTATTaGTTCCTTCCCTGCAGCGAC +
Preference number: 2 (lower is better)
Translates to: HLRLPGARLGASLGGEGGFRNSY*FLPCSD
Trigger: GTCGCTGCAGGGAAGGAACCAATAAGAATTTCTAAA...ACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR TCA 90 bp CGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCTGATTGACAGCCTGTCGTaGAGGAGGCGGGGCTTAGTT +
Preference number: 2 (lower is better)
Translates to: RSFNSSTWRFTEARAEQLIDSLS*RRRGLV
Trigger: AACTAAGCCCCGCCTCCTTCACGACAGGCTGTCAAT...CAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR TCA 90 bp ACAGACGCTGGGGATCCGTTAGTGATGGCTGATCGAGGGTCTCCCTGTCAGGGTGCGTGGCCAACATGGTaGAATCCTGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: TDAGDPLVMADRGSPCQGAWPTW*NPVSTK
Trigger: TTTAGTAGAGACAGGATTTCACCATGTTGGCCACGC...ACCCTGACAGGGAGACCCTCGATCAGCCATCACTAACGGATCCCCAGCGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597370.5
3UTR-3UTR GCA 90 bp GGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTTTGATTGGCTGCTTTaGTTAAGCACACAGTGCAGC +
Preference number: 2 (lower is better)
Translates to: GSFPAATTGCPKLMEPSSFDWLL*LSTQCS
Trigger: GCTGCACTGTGTGCTTAAGCAAAGCAGCCAATCAAA...GCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CCA 90 bp AATTCTTATTGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGACCCAGCAGCTGTCACTaGACGTTTGCCAGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: NSYWFLPCSDNRLPKVDGPSSCH*TFARRQ
Trigger: CTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTGGG...TCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CCA 90 bp AAATATTGCACAGGCTGCTGGTGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTGTTGGGAGCGAGTCTTaGTGGCGAGGGTGGTTTCTG +
Preference number: 2 (lower is better)
Translates to: KYCTGCWWWGDPDRGSFCVGSES*WRGWFL
Trigger: CAGAAACCACCCTCGCCACCAAGACTCGCTCCCAAC...ACAGAAACTACCTCGGTCTGGATCTCCCCACCACCAGCAGCCTGTGCAATATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CCA 90 bp AACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGCCAGCTAAATCGCTTTGATTaGCTGTTCATCGAAGGGGCG +
Preference number: 2 (lower is better)
Translates to: NRLPKVDGTQQLSLDVCQLNRFD*LFIEGA
Trigger: CGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAG...CTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CCA 90 bp CCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGGTGGGACTAAGAAATaGAACAGAAGCAGAGCTAAA +
Preference number: 2 (lower is better)
Translates to: PCSDNRLPKVDGTQQLSLGGTKK*NRSRAK
Trigger: TTTAGCTCTGCTTCTGTTCCATTTCTTAGTCCCACC...CAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CCA 90 bp AACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGCCAGCAGCCAAACCACACTTaGATGTTTATGGTGAGGGTG +
Preference number: 2 (lower is better)
Translates to: NRLPKVDGTQQLSLDVCQQPNHT*MFMVRV
Trigger: CACCCTCACCATAAACATCCAAGTGTGGTTTGGCTG...CTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CCA 90 bp TGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTGGGTCTTGGTGGCGAGGGTaGTTTCTGGTTCACCTACCT +
Preference number: 2 (lower is better)
Translates to: WWGDPDRGSFCRKGERPGSWWRG*FLVHLP
Trigger: AGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGA...CCCAGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR TCA 90 bp GGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACATGATGGGCAGTTTTATAATAACCGTAATTaGCAGCCTGTCGTGAAGGAG +
Preference number: 2 (lower is better)
Translates to: GRLPGGRANGLGAHDGQFYNNRN*QPVVKE
Trigger: CTCCTTCACGACAGGCTGTCAATTACGGTTATTATA...AAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR GCA 90 bp CTGAGCAGCTGTGATTGGCAGACACCCTCAGCTCCTCAGCCAAACCACACTTGGTTTGATTGGCTGCTTTaGTTAAGCACACAGTGCAGC +
Preference number: 2 (lower is better)
Translates to: LSSCDWQTPSAPQPNHTWFDWLL*LSTQCS
Trigger: GCTGCACTGTGTGCTTAAGCAAAGCAGCCAATCAAA...CCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAATCACAGCTGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CCA 90 bp AGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTCTGGTTCACCTACCTGGTGGGACTAAGAAATaGAACAGAAGCAGAGCTAAA +
Preference number: 2 (lower is better)
Translates to: SQVGSESWWRGWFLVHLPGGTKK*NRSRAK
Trigger: TTTAGCTCTGCTTCTGTTCCATTTCTTAGTCCCACC...AGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CCA 90 bp ACCTACCTAGCACAAGGTCTCCAACTCCTTCAGCCTAGACACCCTGATCAGCAGCAGCCAAACCACACTTaGATGTTTATGGTGAGGGTG +
Preference number: 2 (lower is better)
Translates to: TYLAQGLQLLQPRHPDQQQPNHT*MFMVRV
Trigger: CACCCTCACCATAAACATCCAAGTGTGGTTTGGCTG...CTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR TCA 90 bp TGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTGGGAGAGCTAAATCGCTTTaGTTGGCTGTTCATCGAAGG +
Preference number: 2 (lower is better)
Translates to: WWGDPDRGSFCRKGERPGRAKSL*LAVHRR
Trigger: CCTTCGATGAACAGCCAATCAAAGCGATTTAGCTCT...CCCAGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR GCA 90 bp ACCTACCTAGCACAAGGTCTCCAACTCCTTCAGCCTAGACACCCTGATCAGCAGTTTGATTGGCTGCTTTaGTTAAGCACACAGTGCAGC +
Preference number: 2 (lower is better)
Translates to: TYLAQGLQLLQPRHPDQQFDWLL*LSTQCS
Trigger: GCTGCACTGTGTGCTTAAGCAAAGCAGCCAATCAAA...CTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR GCA 90 bp TTGGGACAGGAGACGGGAGAAATTGATAGACCAATAAATATTGCACAGGCTGCTTATTGGTTCCTTCCCTaGAGCGACAACCGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: LGQETGEIDRPINIAQAAYWFLP*SDNRLP
Trigger: GGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATA...AGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CCA 90 bp TGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTGGGGCTAGCTGCTTTGATTaGCTGCTTTGCTTAAGCACA +
Preference number: 2 (lower is better)
Translates to: WWGDPDRGSFCRKGERPGASCFD*LLCLST
Trigger: TGTGCTTAAGCAAAGCAGCCAATCAAAGCAGCTAGC...CCCAGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CCA 90 bp TGGTGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTCTAAATCGCTTTGATTaGCTGTTCATCGAAGGGGCG +
Preference number: 2 (lower is better)
Translates to: WWWGDPDRGSFCRKGERPLNRFD*LFIEGA
Trigger: CGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAG...AGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR TCA 90 bp TTGGGACAGGAGACGGGAGAAATTGATAGACCAATAAATATTGCACAGGCTGCTACCCTGATCAGCAGCTaGCCAGTTGGCCTGCCATTT +
Preference number: 2 (lower is better)
Translates to: LGQETGEIDRPINIAQAATLISS*PVGLPF
Trigger: AAATGGCAGGCCAACTGGTCAGCTGCTGATCAGGGT...AGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR TCA 90 bp TCAGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGGGACTAAGAAGAGCTAAATCGCTTTaGTTGGCTGTTCATCGAAGG +
Preference number: 2 (lower is better)
Translates to: SAPQPNHTWMFMVRVGLRRAKSL*LAVHRR
Trigger: CCTTCGATGAACAGCCAATCAAAGCGATTTAGCTCT...TCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CCA 90 bp TCAGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGGGACTAAGAGCTAGCTGCTTTGATTaGCTGCTTTGCTTAAGCACA +
Preference number: 2 (lower is better)
Translates to: SAPQPNHTWMFMVRVGLRASCFD*LLCLST
Trigger: TGTGCTTAAGCAAAGCAGCCAATCAAAGCAGCTAGC...TCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CCA 90 bp TGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTGGGTTTAGAAATTCTTATTaGTTCCTTCCCTGCAGCGAC +
Preference number: 2 (lower is better)
Translates to: WWGDPDRGSFCRKGERPGFRNSY*FLPCSD
Trigger: GTCGCTGCAGGGAAGGAACCAATAAGAATTTCTAAA...CCCAGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR TCA 90 bp CTTATTAAACATGATTTATTACTTTGGGACAGGAGACGGGAGAAATTGATAGACCGGCCTTGGTGCACATaGTGGGCAGTTTGCCCGGAG +
Preference number: 2 (lower is better)
Translates to: LIKHDLLLWDRRREKLIDRPWCT*WAVCPE
Trigger: CTCCGGGCAAACTGCCCATCATGTGCACCAAGGCCG...GTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATGTTTAATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000377431.6
3UTR-3UTR CCA 90 bp TTGGGACAGGAGACGGGAGAAATTGATAGACCAATAAATATTGCACAGGCTGCTTTTAACTCTTCTACCTaGCGGTTTACAGAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: LGQETGEIDRPINIAQAAFNSST*RFTEAR
Trigger: TCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAA...AGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CAA 90 bp CACCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTGCAGGGCTAACGGCCTaGGTGCACATGATGGGCAGT +
Preference number: 3 (lower is better)
Translates to: HLRLPGARLGASLGGEGGAGLTA*VHMMGS
Trigger: ACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGC...ACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CAA 90 bp CCAGCGCGTAGGCCAGGGTGTCCTCAGACAGCGGGGAGAAGTTGGCCTGGGCCAGTCTCCCTGTCAGGGTaGATGGGGTCATATAAGGCC +
Preference number: 3 (lower is better)
Translates to: PARRPGCPQTAGRSWPGPVSLSG*MGSYKA
Trigger: GGCCTTATATGACCCCATCAACCCTGACAGGGAGAC...TGGCCCAGGCCAACTTCTCCCCGCTGTCTGAGGACACCCTGGCCTACGCGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597370.5
3UTR GCA 72 bp GCAGCCGGGCCAGGATTTGGTGGTAGTGGAACAGGGTaGAGAAGTCCACGTGGGCCGAGAACGCCTCCAAAG +
Preference number: 3 (lower is better)
Translates to: AAGPGFGGSGTG*RSPRGPRTPPK
Trigger: CTTTGGAGGCGTTCTCGGCCCACGTGGACTTCTGCACCCTGTTCCACTACCACCAAATCCTGGCCCGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599220.1
3UTR CCA 72 bp CCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTaGTGGCGAGGGTGGTTTCTGGTTCACCTACCTAGC +
Preference number: 3 (lower is better)
Translates to: PEVAGSQVGSES*WRGWFLVHLPS
Trigger: GCTAGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CAA 90 bp GGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCGCAGGGCTAACGGCCTaGGTGCACATGATGGGCAGT +
Preference number: 3 (lower is better)
Translates to: GSFPAATTGCPKLMEPSSAGLTA*VHMMGS
Trigger: ACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGC...GCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CAA 90 bp CCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTTCAGCAGCTGACCAGTaGGCCTGCCATTTAAGCAGC +
Preference number: 3 (lower is better)
Translates to: PEVAGSQVGSESWWRGWFSAADQ*ACHLSS
Trigger: GCTGCTTAAATGGCAGGCCAACTGGTCAGCTGCTGA...AAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR CCA 72 bp GAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTaGCGAGGGTGGTTTCTGGTTCACCTACCTAGCACA +
Preference number: 3 (lower is better)
Translates to: EVAGSQVGSESW*RGWFLVHLPST
Trigger: TGTGCTAGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR CCA 72 bp GGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTaGTTTCTGGTTCACCTACCTAGCACAAGGTCTCCA +
Preference number: 3 (lower is better)
Translates to: GSQVGSESWWRG*FLVHLPSTRSP
Trigger: TGGAGACCTTGTGCTAGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CAA 90 bp CACCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTCAGCCAAACCACACTaGGATGTTTATGGTGAGGGT +
Preference number: 3 (lower is better)
Translates to: HLRLPGARLGASLGGEGGSAKPH*DVYGEG
Trigger: ACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGA...ACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CAA 90 bp AAATATTGCACAGGCTGCTGGTGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTTTGCCGGGAGCCAGGTaGGGAGCGAGTCTTGGTGGC +
Preference number: 3 (lower is better)
Translates to: KYCTGCWWWGDPDRGSFCLPGAR*GASLGG
Trigger: GCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAA...ACAGAAACTACCTCGGTCTGGATCTCCCCACCACCAGCAGCCTGTGCAATATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR TCA 72 bp GTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTaGTGGAACCCAGCAGCTGTCACTGGACGTTTGCCA +
Preference number: 3 (lower is better)
Translates to: VPSLQRQPAAQS*WNPAAVTGRLP
Trigger: TGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR TCA 72 bp TTAGTGATGGCTGATCGAGGGTCTCCCTGTCAGGGTTaGTGGGGTCATATAAGGCCTGCAGCCGGGCCAGGA +
Preference number: 3 (lower is better)
Translates to: LVMADRGSPCQG*WGHIRPAAGPG
Trigger: TCCTGGCCCGGCTGCAGGCCTTATATGACCCCATCAACCCTGACAGGGAGACCCTCGATCAGCCATCACTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599220.1
3UTR TCA 72 bp ACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCTGTaGTTGGCAGACACCCTCAGCTCCTCAGCCAAACCA +
Preference number: 3 (lower is better)
Translates to: TWRFTEARAEQL*LADTLSSSAKP
Trigger: TGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAATCACAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR GCA 72 bp AAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTaGCAGGAGGCAGGGCTAACGGCCTTGGTGCACATG +
Preference number: 3 (lower is better)
Translates to: KVDGTQQLSLDV*QEAGLTALVHM
Trigger: CATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CAA 90 bp AAATATTGCACAGGCTGCTGGTGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTGCTGTCACTGGACGTTaGCCAGGAGGCAGGGCTAAC +
Preference number: 3 (lower is better)
Translates to: KYCTGCWWWGDPDRGSFCAVTGR*PGGRAN
Trigger: GTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGC...ACAGAAACTACCTCGGTCTGGATCTCCCCACCACCAGCAGCCTGTGCAATATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR TCA 72 bp TCATTAGACAGACGCTGGGGATCCGTTAGTGATGGCTaGTCGAGGGTCTCCCTGTCAGGGTTGATGGGGTCA +
Preference number: 3 (lower is better)
Translates to: SLDRRWGSVSDG*SRVSLSGLMGS
Trigger: TGACCCCATCAACCCTGACAGGGAGACCCTCGATCAGCCATCACTAACGGATCCCCAGCGTCTGTCTAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597370.5
ENST00000599220.1
3UTR CCA 72 bp AGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTCTaGTTCACCTACCTAGCACAAGGTCTCCAACTCCTT +
Preference number: 3 (lower is better)
Translates to: RLGASLGGEGGF*FTYLAQGLQLL
Trigger: AAGGAGTTGGAGACCTTGTGCTAGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCCAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CAA 90 bp CCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTATCACCTGTCAGTTATaGGAAGTTGGAGTGAAAAGT +
Preference number: 3 (lower is better)
Translates to: PEVAGSQVGSESWWRGWFITCQL*EVGVKS
Trigger: ACTTTTCACTCCAACTTCCAATAACTGACAGGTGAT...AAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CAA 90 bp TGGTGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTACCGGCTGCCCAAAGTaGATGGAACCCAGCAGCTGT +
Preference number: 3 (lower is better)
Translates to: WWWGDPDRGSFCRKGERPTGCPK*MEPSSC
Trigger: ACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGT...AGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR GCA 72 bp ATTCTTATTGGTTCCTTCCCTGCAGCGACAACCGGCTaGCCAAAGTTGATGGAACCCAGCAGCTGTCACTGG +
Preference number: 3 (lower is better)
Translates to: ILIGSFPAATTG*PKLMEPSSCHW
Trigger: CCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CAA 90 bp TGGTGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTTCAGCAGCTGACCAGTaGGCCTGCCATTTAAGCAGC +
Preference number: 3 (lower is better)
Translates to: WWWGDPDRGSFCRKGERPSAADQ*ACHLSS
Trigger: GCTGCTTAAATGGCAGGCCAACTGGTCAGCTGCTGA...AGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR TCA 72 bp TCCAACTCCTTCAGCCTAGACACCCTGATCAGCAGCTaGCCAGTTGGCCTGCCATTTAAGCAGCAGCAATTG +
Preference number: 3 (lower is better)
Translates to: SNSFSLDTLISS*PVGLPFKQQQL
Trigger: CAATTGCTGCTGCTTAAATGGCAGGCCAACTGGTCAGCTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CAA 90 bp CGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCTGTCAGCCAAACCACACTaGGATGTTTATGGTGAGGGT +
Preference number: 3 (lower is better)
Translates to: RSFNSSTWRFTEARAEQLSAKPH*DVYGEG
Trigger: ACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGA...CAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR CCA 72 bp TGGCAGACACCCTCAGCTCCTCAGCCAAACCACACTTaGATGTTTATGGTGAGGGTGGGACTAAGAAATGGA +
Preference number: 3 (lower is better)
Translates to: WQTPSAPQPNHT*MFMVRVGLRNG
Trigger: TCCATTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CAA 90 bp GGCGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCATCACCTGTCAGTTATaGGAAGTTGGAGTGAAAAGT +
Preference number: 3 (lower is better)
Translates to: GAALTLLPGGLQKPELSSITCQL*EVGVKS
Trigger: ACTTTTCACTCCAACTTCCAATAACTGACAGGTGAT...GCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR TCA 72 bp GTGAAAAGTATAATAACCGTAATTGACAGCCTGTCGTaGAGGAGGCGGGGCTTAGTTCCTAGCCTGCTGACT +
Preference number: 3 (lower is better)
Translates to: VKSIITVIDSLS*RRRGLVPSLLT
Trigger: AGTCAGCAGGCTAGGAACTAAGCCCCGCCTCCTTCACGACAGGCTGTCAATTACGGTTATTATACTTTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CAA 90 bp CTTATTAAACATGATTTATTACTTTGGGACAGGAGACGGGAGAAATTGATAGACTTGCCGGGAGCCAGGTaGGGAGCGAGTCTTGGTGGC +
Preference number: 3 (lower is better)
Translates to: LIKHDLLLWDRRREKLIDLPGAR*GASLGG
Trigger: GCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAA...GTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATGTTTAATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000377431.6
3UTR TCA 72 bp ATTGGAAGTTGGAGTGAAAAGTATAATAACCGTAATTaGCAGCCTGTCGTGAAGGAGGCGGGGCTTAGTTCC +
Preference number: 3 (lower is better)
Translates to: IGSWSEKYNNRN*QPVVKEAGLSS
Trigger: GGAACTAAGCCCCGCCTCCTTCACGACAGGCTGTCAATTACGGTTATTATACTTTTCACTCCAACTTCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR-3UTR CAA 90 bp AGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGGGACTAAGAAAATCACCTGTCAGTTATaGGAAGTTGGAGTGAAAAGT +
Preference number: 3 (lower is better)
Translates to: SSSAKPHLDVYGEGGTKKITCQL*EVGVKS
Trigger: ACTTTTCACTCCAACTTCCAATAACTGACAGGTGAT...TTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CCAGCGCGTAGGCCAGGGTGTCCTCAGACAGCGGGGAGAAGTTGGCCTGGGCCACGCTCGCGGTACTGCTaGGCCCAGTCGCGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PARRPGCPQTAGRSWPGPRSRYC*AQSRGS
Trigger: GGAGCCCCGCGACTGGGCCCAGCAGTACCGCGAGCG...TGGCCCAGGCCAACTTCTCCCCGCTGTCTGAGGACACCCTGGCCTACGCGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597370.5
CDS-3UTR TCA 90 bp CCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTTCTTCGGGCGAGCCTTaGGTGCCCCCTGGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: PEVAGSQVGSESWWRGWFSSGEP*VPPGRR
Trigger: CCGGCGGCCAGGGGGCACTCAAGGCTCGCCCGAAGA...AAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp GGACCACCAGCGCGTAGGCCAGGGTGTCCTCAGACAGCGGGGAGAAGTTGGCCTAAGCGCTCGCGGTACTaGTGGGCCCAGTCGCGGGGC +
Preference number: 4 (lower is better)
Translates to: GPPARRPGCPQTAGRSWPKRSRY*WAQSRG
Trigger: GCCCCGCGACTGGGCCCAGCAGTACCGCGAGCGCTT...AGGCCAACTTCTCCCCGCTGTCTGAGGACACCCTGGCCTACGCGCTGGTGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597370.5
CDS-3UTR CCA 90 bp CACCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTGGGCGCGCTGCAGGGTaGGCGTGCGCACCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: HLRLPGARLGASLGGEGGGRAAG*ACAPSA
Trigger: AGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCC...ACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp CACCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTCCAACGCCTGCGCGCTaGGCCGCTGCCCGAACATCT +
Preference number: 4 (lower is better)
Translates to: HLRLPGARLGASLGGEGGPTPAR*AAARTS
Trigger: AGATGTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGG...ACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp GTGGAACAGGGTGCAGAAGTCCACGTGGGCCGAGAACGCCTCCAAAGCCGCCTTCGCTCGCGGTACTGCTaGGCCCAGTCGCGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: VEQGAEVHVGRERLQSRLRSRYC*AQSRGS
Trigger: GGAGCCCCGCGACTGGGCCCAGCAGTACCGCGAGCG...AAGGCGGCTTTGGAGGCGTTCTCGGCCCACGTGGACTTCTGCACCCTGTTCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599220.1
CDS-3UTR TCA 90 bp GAGGGTGGTGGACCACCAGCGCGTAGGCCAGGGTGTCCTCAGACAGCGGGGAGAAGGCGGAGGCTGCAGTaGGTCGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: EGGGPPARRPGCPQTAGRRRRLQ*VEIVPL
Trigger: CAGTGGCACGATCTCGACTCACTGCAGCCTCCGCCT...TCTCCCCGCTGTCTGAGGACACCCTGGCCTACGCGCTGGTGGTCCACCACCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597370.5
CDS-3UTR GCA 90 bp GTGGAACAGGGTGCAGAAGTCCACGTGGGCCGAGAACGCCTCCAAAGCCGCCTTAAGCGCTCGCGGTACTaGTGGGCCCAGTCGCGGGGC +
Preference number: 4 (lower is better)
Translates to: VEQGAEVHVGRERLQSRLKRSRY*WAQSRG
Trigger: GCCCCGCGACTGGGCCCAGCAGTACCGCGAGCGCTT...AAGGCGGCTTTGGAGGCGTTCTCGGCCCACGTGGACTTCTGCACCCTGTTCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599220.1
CDS-3UTR CCA 90 bp CACCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTGCCTGGAGCCCACGCTaGACTTCAGGGGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: HLRLPGARLGASLGGEGGAWSPR*TSGASA
Trigger: GGCAGATGCCCCTGAAGTCCAGCGTGGGCTCCAGGC...ACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTCCGACCGGAGCCACCTaGAGGTCTCTTCGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: PEVAGSQVGSESWWRGWFPTGAT*RSLRAS
Trigger: GCTCGCCCGAAGAGACCTCCAGGTGGCTCCGGTCGG...AAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR CAA 72 bp GGGCGAGGAAGGCACCTGAGGTTGCCGGGAGCCAGGTaGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: GRGRHLRLPGAR*GASLGGEGGFW
Trigger: CCAGAAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTGCCTTCCTCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp CAGCAGCTGTCACTGGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACGCAGGGCCAGGGCGCTaGGCAGCTCCGAGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: QQLSLDVCQEAGLTALVHAGPGR*AAPSCW
Trigger: CCAACAACTCGGAGCTGCTCAGCGCCCTGGCCCTGC...GTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp GGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACATGATGGGCAGTTTTCTTCGGGCGAGCCTTaGGTGCCCCCTGGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: GRLPGGRANGLGAHDGQFSSGEP*VPPGRR
Trigger: CCGGCGGCCAGGGGGCACTCAAGGCTCGCCCGAAGA...AAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp CAGCAGCTGTCACTGGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACAGCTCCGGCAGCAGCTaGTCCAGGCCTTCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: QQLSLDVCQEAGLTALVHSSGSS*SRPSSG
Trigger: GCCGCTGGAAGGCCTGGAGCAGCTGCTGCCGGAGCT...GTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CCAGCGCGTAGGCCAGGGTGTCCTCAGACAGCGGGGAGAAGTTGGCCTGGGCCAAGTCGCGGGGCTCCCTaGGGTTCCACATCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: PARRPGCPQTAGRSWPGPSRGAP*GSTSCD
Trigger: ATCGCAAGATGTGGAACCCCAGGGAGCCCCGCGACT...TGGCCCAGGCCAACTTCTCCCCGCTGTCTGAGGACACCCTGGCCTACGCGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597370.5
CDS-3UTR CCA 90 bp CCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTCCAGGTGTCCCCGTTTaGTCCGGGCTGCCAGGACCA +
Preference number: 4 (lower is better)
Translates to: PEVAGSQVGSESWWRGWFPGVPV*SGLPGP
Trigger: TGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGG...AAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp GGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCGCCTTGAGTGCCCCCTaGCCGCCGGGCCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: GSFPAATTGCPKLMEPSSALSAP*PPGQEA
Trigger: AGCTTCCTGGCCCGGCGGCCAGGGGGCACTCAAGGC...GCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp CCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTGGGAGGTGGCCACCTTaGGGTCGGTTAGCACCACCA +
Preference number: 4 (lower is better)
Translates to: PEVAGSQVGSESWWRGWFGRWPP*GRLAPP
Trigger: TGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCC...AAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp CCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTCGGCCTTGGTGCACATaGTGGGCAGTTTGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: PEVAGSQVGSESWWRGWFRPWCT*WAVCPE
Trigger: CTCCGGGCAAACTGCCCATCATGTGCACCAAGGCCG...AAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp CCAGCGCGTAGGCCAGGGTGTCCTCAGACAGCGGGGAGAAGTTGGCCTGGGCCAGCCCGAAGCACCTCCTaGTCATTAGACAGACGCTGG +
Preference number: 4 (lower is better)
Translates to: PARRPGCPQTAGRSWPGPARSTS*SLDRRW
Trigger: CCAGCGTCTGTCTAATGAGCAGGAGGTGCTTCGGGC...TGGCCCAGGCCAACTTCTCCCCGCTGTCTGAGGACACCCTGGCCTACGCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597370.5
CDS-3UTR GCA 90 bp TGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGTTGGTGTGCTCGTCCTaGGCGCGCAGGGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: WFLPCSDNRLPKVDGTQQLVCSS*ARRARA
Trigger: CGCCCTGGCCCTGCGCGCGCAGGACGAGCACACCAA...CTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp CACCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTGTGGGTACAATCCCATaGTGGGGGTCAGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: HLRLPGARLGASLGGEGGVGTIP*WGSGPA
Trigger: TGCAGGCCCTGACCCCCAGCATGGGATTGTACCCAC...ACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp GAGGGTGGTGGACCACCAGCGCGTAGGCCAGGGTGTCCTCAGACAGCGGGGAGAGGGTCACATGCAGCATaGCTAGACCCTTTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: EGGGPPARRPGCPQTAGRGSHAA*LDPFPG
Trigger: TCCGGGGAAAGGGTCTAGCCATGCTGCATGTGACCC...TCTCCCCGCTGTCTGAGGACACCCTGGCCTACGCGCTGGTGGTCCACCACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597370.5
CDS-3UTR CCA 90 bp CCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTGAGCGCGGGCAACAGTaGCCATACTCGGACCCTGGA +
Preference number: 4 (lower is better)
Translates to: PEVAGSQVGSESWWRGWFERGQQ*PYSDPG
Trigger: TCCAGGGTCCGAGTATGGCCACTGTTGCCCGCGCTC...AAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp AACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGCCAGCGCTCGCGGTACTGCTaGGCCCAGTCGCGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: NRLPKVDGTQQLSLDVCQRSRYC*AQSRGS
Trigger: GGAGCCCCGCGACTGGGCCCAGCAGTACCGCGAGCG...CTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTGGGGAAACCCGGGGGTaGGTACAATCCCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: PEVAGSQVGSESWWRGWFGETRG*VQSHAG
Trigger: CCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCC...AAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CACCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTCCACTGGGTCTAGTTTaGGGAAACCCGGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: HLRLPGARLGASLGGEGGPLGLV*GNPGVG
Trigger: ACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGG...ACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTTGTTACTGCTGGGCGTaGCTTGCGGGGGCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: PEVAGSQVGSESWWRGWFCYCWA*LAGARK
Trigger: CTTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACA...AAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR CAA 72 bp TCACTGGACGTTTGCCAGGAGGCAGGGCTAACGGCCTaGGTGCACATGATGGGCAGTTTGCCCGGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: SLDVCQEAGLTA*VHMMGSLPGAG
Trigger: GCCCGCTCCGGGCAAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR CAA 72 bp AAGGGTGAAAGACCTGGGCGAGGAAGGCACCTGAGGTaGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: KGERPGRGRHLR*PGARLGASLGG
Trigger: GCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTGCCTTCCTCGCCCAGGTCTTTCACCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp CCAGCGCGTAGGCCAGGGTGTCCTCAGACAGCGGGGAGAAGTTGGCCTGGGCCATCCGTTAGTGATGGCTaGTCGAGGGTCTCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: PARRPGCPQTAGRSWPGPSVSDG*SRVSLS
Trigger: TGACAGGGAGACCCTCGATCAGCCATCACTAACGGA...TGGCCCAGGCCAACTTCTCCCCGCTGTCTGAGGACACCCTGGCCTACGCGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597370.5
CDS-3UTR TCA 90 bp CAGCAGCTGTCACTGGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACAGGCCCGCAGGCCCATaGAGATGGCGAAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QQLSLDVCQEAGLTALVHRPAGP*RWRRAA
Trigger: TGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCT...GTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp TGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGGCAGGGCCAGGGCGCTaGGCAGCTCCGAGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: WFLPCSDNRLPKVDGTQQAGPGR*AAPSCW
Trigger: CCAACAACTCGGAGCTGCTCAGCGCCCTGGCCCTGC...CTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp AGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTCTGGTTCACCTACCTGGCGAGGAAGGCACCTaGGGTTGCCGGGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SQVGSESWWRGWFLVHLPGEEGT*GCREPG
Trigger: ACCTGGCTCCCGGCAACCTCAGGTGCCTTCCTCGCC...AGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp AACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGCCAGTTGAGCAGGGCGCGCTaGAGGGTGGGCGTGCGCACC +
Preference number: 4 (lower is better)
Translates to: NRLPKVDGTQQLSLDVCQLSRAR*RVGVRT
Trigger: GGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAA...CTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp AGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTCTGGTTCACCTACCTTGCGCGCTGCGCCGCTaGCCGAACATCTTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SQVGSESWWRGWFLVHLPCALRR*PNILEA
Trigger: GGCCTCCAAGATGTTCGGGCAGCGGCGCAGCGCGCA...AGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp GCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTTTGGTGTGCTCGTCCTaGGCGCGCAGGGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: ATTGCPKLMEPSSCHWTFLVCSS*ARRARA
Trigger: CGCCCTGGCCCTGCGCGCGCAGGACGAGCACACCAA...AAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CACGTGGGCCGAGAACGCCTCCAAAGCCGCCTTCTCTGCCGGACTCGAGTGGAAAGTCGCGGGGCTCCCTaGGGTTCCACATCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: HVGRERLQSRLLCRTRVESRGAP*GSTSCD
Trigger: ATCGCAAGATGTGGAACCCCAGGGAGCCCCGCGACT...TTCCACTCGAGTCCGGCAGAGAAGGCGGCTTTGGAGGCGTTCTCGGCCCACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599220.1
CDS-3UTR CCA 90 bp GGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCCCAGGTGTCCCCGTTTaGTCCGGGCTGCCAGGACCA +
Preference number: 4 (lower is better)
Translates to: GSFPAATTGCPKLMEPSSPGVPV*SGLPGP
Trigger: TGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGG...GCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp AGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTCTGGTTCACCTACCTCCAGCAGCGCCTCCTTaGTGTGCTCGTCCTGCGCGC +
Preference number: 4 (lower is better)
Translates to: SQVGSESWWRGWFLVHLPPAAPP*CARPAR
Trigger: GCGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGG...AGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CAGCAGCTGTCACTGGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACGGGGAAACCCGGGGGTaGGTACAATCCCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: QQLSLDVCQEAGLTALVHGETRG*VQSHAG
Trigger: CCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCC...GTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CAGCAGCTGTCACTGGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACTGTTACTGCTGGGCGTaGCTTGCGGGGGCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: QQLSLDVCQEAGLTALVHCYCWA*LAGARK
Trigger: CTTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACA...GTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTCCCAGCAGCTGTCACTaGACGTTTGCCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PEVAGSQVGSESWWRGWFPSSCH*TFARRQ
Trigger: CTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTGGG...AAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp GGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACATGATGGGCAGTTTCAGGGGGCAGCTTGGTaGAGAAGCCACGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GRLPGGRANGLGAHDGQFQGAAW*RSHAWS
Trigger: GCTCCAGGCGTGGCTTCTTCACCAAGCTGCCCCCTG...AAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp CCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGGGCCCGAGTTCCGTTaGAGGTCACCTCACAGCCTG +
Preference number: 4 (lower is better)
Translates to: PCSDNRLPKVDGTQQLSLGPEFR*RSPHSL
Trigger: CAGGCTGTGAGGTGACCTTCAACGGAACTCGGGCCC...CAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp CACCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTATTGACAGCCTGTCGTaGAGGAGGCGGGGCTTAGTT +
Preference number: 4 (lower is better)
Translates to: HLRLPGARLGASLGGEGGIDSLS*RRRGLV
Trigger: AACTAAGCCCCGCCTCCTTCACGACAGGCTGTCAAT...ACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp CACCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTAAGCTCGACTGTCATTaGGCCTCCTGCGCATGTGCA +
Preference number: 4 (lower is better)
Translates to: HLRLPGARLGASLGGEGGKLDCH*ASCACA
Trigger: TGCACATGCGCAGGAGGCTCAATGACAGTCGAGCTT...ACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435956.7
CDS-3UTR GCA 90 bp GGCGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCAAGCGCTCGCGGTACTaGTGGGCCCAGTCGCGGGGC +
Preference number: 4 (lower is better)
Translates to: GAALTLLPGGLQKPELSSKRSRY*WAQSRG
Trigger: GCCCCGCGACTGGGCCCAGCAGTACCGCGAGCGCTT...GCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp CAGCAGCTGTCACTGGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACGGTAGTGGAACAGGGTaGAGAAGTCCACGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: QQLSLDVCQEAGLTALVHGSGTG*RSPRGP
Trigger: CGGCCCACGTGGACTTCTGCACCCTGTTCCACTACC...GTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293261.8
CDS-3UTR GCA 90 bp AACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGCCAGAGCTCCGGCAGCAGCTaGTCCAGGCCTTCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: NRLPKVDGTQQLSLDVCQSSGSS*SRPSSG
Trigger: GCCGCTGGAAGGCCTGGAGCAGCTGCTGCCGGAGCT...CTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp CTGAGCAGCTGTGATTGGCAGACACCCTCAGCTCCTCAGCCAAACCACACTTGGAGCGCCTCCTTGGTGTaGTCGTCCTGCGCGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LSSCDWQTPSAPQPNHTWSASLV*SSCARR
Trigger: CCTGCGCGCGCAGGACGAGCACACCAAGGAGGCGCT...CCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAATCACAGCTGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTGGGTCACATGCAGCATaGCTAGACCCTTTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: PEVAGSQVGSESWWRGWFGSHAA*LDPFPG
Trigger: TCCGGGGAAAGGGTCTAGCCATGCTGCATGTGACCC...AAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp TGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTGGGCGCTCGCGGTACTGCTaGGCCCAGTCGCGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: WWGDPDRGSFCRKGERPGRSRYC*AQSRGS
Trigger: GGAGCCCCGCGACTGGGCCCAGCAGTACCGCGAGCG...CCCAGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp ACCTACCTAGCACAAGGTCTCCAACTCCTTCAGCCTAGACACCCTGATCAGCAGCGCTCGCGGTACTGCTaGGCCCAGTCGCGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: TYLAQGLQLLQPRHPDQQRSRYC*AQSRGS
Trigger: GGAGCCCCGCGACTGGGCCCAGCAGTACCGCGAGCG...CTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp GGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACATGATGGGCAGTTTGGGGAGAAGTTGGCCTaGGCCAGCAGGGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GRLPGGRANGLGAHDGQFGEKLA*ASRGSR
Trigger: TCTGGAGCCCCTGCTGGCCCAGGCCAACTTCTCCCC...AAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000435956.7
CDS-3UTR CCA 90 bp AACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGCCAGCCAGCAGCGCCTCCTTaGTGTGCTCGTCCTGCGCGC +
Preference number: 4 (lower is better)
Translates to: NRLPKVDGTQQLSLDVCQPAAPP*CARPAR
Trigger: GCGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGG...CTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp GGCGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCGCCTTGAGTGCCCCCTaGCCGCCGGGCCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: GAALTLLPGGLQKPELSSALSAP*PPGQEA
Trigger: AGCTTCCTGGCCCGGCGGCCAGGGGGCACTCAAGGC...GCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp TGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGTGCCGGGAGCCAGGTTaGGAGCGAGTCTTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: WFLPCSDNRLPKVDGTQQCREPG*ERVLVA
Trigger: CGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCA...CTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp AGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTCTGGTTCACCTACCTTGCCGGGAGCCAGGTTaGGAGCGAGTCTTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: SQVGSESWWRGWFLVHLPCREPG*ERVLVA
Trigger: CGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCA...AGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp GGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACATGATGGGCAGTTTTGCAGGAGGGCGTCCTaGGCTCCCGAGGTTCGGCTT +
Preference number: 4 (lower is better)
Translates to: GRLPGGRANGLGAHDGQFCRRAS*APEVRL
Trigger: AAGCCGAACCTCGGGAGCCCAGGACGCCCTCCTGCA...AAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435956.7
CDS-3UTR TCA 90 bp GGACCACCAGCGCGTAGGCCAGGGTGTCCTCAGACAGCGGGGAGAAGTTGGCCTTCTCCCTGTCAGGGTTaGTGGGGTCATATAAGGCCT +
Preference number: 4 (lower is better)
Translates to: GPPARRPGCPQTAGRSWPSPCQG*WGHIRP
Trigger: AGGCCTTATATGACCCCATCAACCCTGACAGGGAGA...AGGCCAACTTCTCCCCGCTGTCTGAGGACACCCTGGCCTACGCGCTGGTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597370.5
CDS-3UTR GCA 90 bp CGTGGGCCGAGAACGCCTCCAAAGCCGCCTTCTCTGCCGGACTCGAGTGGAATTAGGAGGCGGAGCAGCTaGTCCTTGGAGAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: RGPRTPPKPPSLPDSSGIRRRSS*SLEKGM
Trigger: CATTCCCTTCTCCAAGGAGCAGCTGCTCCGCCTCCT...AATTCCACTCGAGTCCGGCAGAGAAGGCGGCTTTGGAGGCGTTCTCGGCCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599220.1
CDS-3UTR GCA 90 bp CCTGCAGCCGGGCCAGGATTTGGTGGTAGTGGAACAGGGTGCAGAAGTCCACGTGGTAGTGGAACAGGGTaGAGAAGTCCACGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: PAAGPGFGGSGTGCRSPRGSGTG*RSPRGP
Trigger: CGGCCCACGTGGACTTCTGCACCCTGTTCCACTACC...ACGTGGACTTCTGCACCCTGTTCCACTACCACCAAATCCTGGCCCGGCTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599220.1
CDS-3UTR GCA 90 bp GGCGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCAGCGCCTCCTTGGTGTaGTCGTCCTGCGCGCGCAGG +
Preference number: 4 (lower is better)
Translates to: GAALTLLPGGLQKPELSSSASLV*SSCARR
Trigger: CCTGCGCGCGCAGGACGAGCACACCAAGGAGGCGCT...GCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp CGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCTGCTGGGGGTCAGGGCCTaGAGATGCGCCAGGGCCCGA +
Preference number: 4 (lower is better)
Translates to: RSFNSSTWRFTEARAEQLLGVRA*RCARAR
Trigger: TCGGGCCCTGGCGCATCTGCAGGCCCTGACCCCCAG...CAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp ACCTACCTAGCACAAGGTCTCCAACTCCTTCAGCCTAGACACCCTGATCAGCAGCTGGGGGTCAGGGCCTaGAGATGCGCCAGGGCCCGA +
Preference number: 4 (lower is better)
Translates to: TYLAQGLQLLQPRHPDQQLGVRA*RCARAR
Trigger: TCGGGCCCTGGCGCATCTGCAGGCCCTGACCCCCAG...CTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp GTGGAACAGGGTGCAGAAGTCCACGTGGGCCGAGAACGCCTCCAAAGCCGCCTTGTGCAGAAGTCCACGTaGGCCGAGAACGCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: VEQGAEVHVGRERLQSRLVQKST*AENASK
Trigger: TTTGGAGGCGTTCTCGGCCCACGTGGACTTCTGCAC...AAGGCGGCTTTGGAGGCGTTCTCGGCCCACGTGGACTTCTGCACCCTGTTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599220.1
CDS-3UTR CCA 90 bp CTGAGCAGCTGTGATTGGCAGACACCCTCAGCTCCTCAGCCAAACCACACTTGGGCCTGGAGCCCACGCTaGACTTCAGGGGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: LSSCDWQTPSAPQPNHTWAWSPR*TSGASA
Trigger: GGCAGATGCCCCTGAAGTCCAGCGTGGGCTCCAGGC...CCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAATCACAGCTGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CAGACACCCTCAGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGGGGCGCGCTGCAGGGTaGGCGTGCGCACCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: QTPSAPQPNHTWMFMVRVGRAAG*ACAPSA
Trigger: AGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCC...CACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTTATTGCACAGGCTGCTaGTGGTGGGGAGATCCAGAC +
Preference number: 4 (lower is better)
Translates to: PEVAGSQVGSESWWRGWFYCTGC*WWGDPD
Trigger: GTCTGGATCTCCCCACCACCAGCAGCCTGTGCAATA...AAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp AACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGCCAGACCTGGACCTCATCCTaGGGGTGGTGGACCACCAGC +
Preference number: 4 (lower is better)
Translates to: NRLPKVDGTQQLSLDVCQTWTSS*GWWTTS
Trigger: GCTGGTGGTCCACCACCCTCAGGATGAGGTCCAGGT...CTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000435956.7
CDS-3UTR TCA 90 bp CCAAATTTACTGTCACCTGGACCTCATCCTGAGGGTGGTGGACCACCAGCGCGTACCTGGACCTCATCCTaGGGGTGGTGGACCACCAGC +
Preference number: 4 (lower is better)
Translates to: PNLLSPGPHPEGGGPPARTWTSS*GWWTTS
Trigger: GCTGGTGGTCCACCACCCTCAGGATGAGGTCCAGGT...ACGCGCTGGTGGTCCACCACCCTCAGGATGAGGTCCAGGTGACAGTAAATTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597370.5
CDS-3UTR TCA 90 bp CAGACACCCTCAGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGGCAGGGCCAGGGCGCTaGGCAGCTCCGAGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: QTPSAPQPNHTWMFMVRVAGPGR*AAPSCW
Trigger: CCAACAACTCGGAGCTGCTCAGCGCCCTGGCCCTGC...CACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp TGGTGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTAAGCGCTCGCGGTACTaGTGGGCCCAGTCGCGGGGC +
Preference number: 4 (lower is better)
Translates to: WWWGDPDRGSFCRKGERPKRSRY*WAQSRG
Trigger: GCCCCGCGACTGGGCCCAGCAGTACCGCGAGCGCTT...AGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp GGCGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCGACTTCAGGGGCATCTaGCCGACTCGCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GAALTLLPGGLQKPELSSDFRGI*PTRWPR
Trigger: CCTGGGCCAGCGAGTCGGGCAGATGCCCCTGAAGTC...GCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp AAATATTGCACAGGCTGCTGGTGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTTTGGTGTGCTCGTCCTaGGCGCGCAGGGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: KYCTGCWWWGDPDRGSFCLVCSS*ARRARA
Trigger: CGCCCTGGCCCTGCGCGCGCAGGACGAGCACACCAA...ACAGAAACTACCTCGGTCTGGATCTCCCCACCACCAGCAGCCTGTGCAATATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp TGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTGGGAGCGCCTCCTTGGTGTaGTCGTCCTGCGCGCGCAGG +
Preference number: 4 (lower is better)
Translates to: WWGDPDRGSFCRKGERPGSASLV*SSCARR
Trigger: CCTGCGCGCGCAGGACGAGCACACCAAGGAGGCGCT...CCCAGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp CCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGCTGTCACTGGACGTTTaGCAGGAGGCAGGGCTAACG +
Preference number: 4 (lower is better)
Translates to: PCSDNRLPKVDGTQQLSLLSLDV*QEAGLT
Trigger: CGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAG...CAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp TGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGAGTCGCGGGGCTCCCTaGGGTTCCACATCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: WFLPCSDNRLPKVDGTQQSRGAP*GSTSCD
Trigger: ATCGCAAGATGTGGAACCCCAGGGAGCCCCGCGACT...CTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp ACCTACCTAGCACAAGGTCTCCAACTCCTTCAGCCTAGACACCCTGATCAGCAGCCGACCGGAGCCACCTaGAGGTCTCTTCGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: TYLAQGLQLLQPRHPDQQPTGAT*RSLRAS
Trigger: GCTCGCCCGAAGAGACCTCCAGGTGGCTCCGGTCGG...CTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp GGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCGGTACAATCCCATGCTaGGGGTCAGGGCCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: GSFPAATTGCPKLMEPSSGTIPC*GSGPAD
Trigger: ATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACC...GCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp GCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTTGTTACTGCTGGGCGTaGCTTGCGGGGGCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: ATTGCPKLMEPSSCHWTFCYCWA*LAGARK
Trigger: CTTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACA...AAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR CAA 72 bp GGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTaGATGGAACCCAGCAGCTGTCACTGGACGTTTGCC +
Preference number: 4 (lower is better)
Translates to: GSFPAATTGCPK*MEPSSCHWTFA
Trigger: GGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp AGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTCTGGTTCACCTACCTCCTTGGAGAAGGGAATaGAGCGCTCGCGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: SQVGSESWWRGWFLVHLPPWRRE*SARGTA
Trigger: AGCAGTACCGCGAGCGCTTCATTCCCTTCTCCAAGG...AGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp GCCCGAAGCACCTCCTGCTCATTAGACAGACGCTGGGGATCCGTTAGTGATGGCCCTTGGAGAAGGGAATaGAGCGCTCGCGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: ARSTSCSLDRRWGSVSDGPWRRE*SARGTA
Trigger: AGCAGTACCGCGAGCGCTTCATTCCCTTCTCCAAGG...GCCATCACTAACGGATCCCCAGCGTCTGTCTAATGAGCAGGAGGTGCTTCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597370.5
CDS-3UTR TCA 90 bp GTCTCCCTGTCAGGGTTGATGGGGTCATATAAGGCCTGCAGCCGGGCCAGGATTCCTTGGAGAAGGGAATaGAGCGCTCGCGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: VSLSGLMGSYKACSRARIPWRRE*SARGTA
Trigger: AGCAGTACCGCGAGCGCTTCATTCCCTTCTCCAAGG...AATCCTGGCCCGGCTGCAGGCCTTATATGACCCCATCAACCCTGACAGGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599220.1
CDS-3UTR TCA 90 bp TGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTGGGCAGGGGGCAGCTTGGTaGAGAAGCCACGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: WWGDPDRGSFCRKGERPGQGAAW*RSHAWS
Trigger: GCTCCAGGCGTGGCTTCTTCACCAAGCTGCCCCCTG...CCCAGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp CCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGCCAGCGGCGTGTCCTTaGAACTCTTCAGTACCAGGT +
Preference number: 4 (lower is better)
Translates to: PCSDNRLPKVDGTQQLSLPAACP*NSSVPG
Trigger: ACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGG...CAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp CGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCTGCCACCATGCCCACGTTaGCGAAGATCGCCACGCCGG +
Preference number: 4 (lower is better)
Translates to: RSFNSSTWRFTEARAEQLPPCPR*RRSPRR
Trigger: CCGGCGTGGCGATCTTCGTCAACGTGGGCATGGTGG...CAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp CAGACACCCTCAGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGCCACCATGCCCACGTTaGCGAAGATCGCCACGCCGG +
Preference number: 4 (lower is better)
Translates to: QTPSAPQPNHTWMFMVRVPPCPR*RRSPRR
Trigger: CCGGCGTGGCGATCTTCGTCAACGTGGGCATGGTGG...CACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp CGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCTGGCGGGGGCTCGGAAGTaGTCGGAGCCACTGGGTCTA +
Preference number: 4 (lower is better)
Translates to: RSFNSSTWRFTEARAEQLAGARK*SEPLGL
Trigger: TAGACCCAGTGGCTCCGATCACTTCCGAGCCCCCGC...CAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp AGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTCTGGTTCACCTACCTAGAGCTGAGCAGCTGTaGTTGGCAGACACCCTCAGC +
Preference number: 4 (lower is better)
Translates to: SQVGSESWWRGWFLVHLPRAEQL*LADTLS
Trigger: GCTGAGGGTGTCTGCCAATCACAGCTGCTCAGCTCT...AGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp GGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCACCCTGATCAGCAGCTaGCCAGTTGGCCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: GSFPAATTGCPKLMEPSSTLISS*PVGLPF
Trigger: AAATGGCAGGCCAACTGGTCAGCTGCTGATCAGGGT...GCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp CCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGACCCTGATCAGCAGCTaGCCAGTTGGCCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: PCSDNRLPKVDGTQQLSLTLISS*PVGLPF
Trigger: AAATGGCAGGCCAACTGGTCAGCTGCTGATCAGGGT...CAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp GCCCGAAGCACCTCCTGCTCATTAGACAGACGCTGGGGATCCGTTAGTGATGGCAGCTGGAGAATTGCTTaGACCAGGGAGGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: ARSTSCSLDRRWGSVSDGSWRIA*TREAEA
Trigger: AGCCTCCGCCTCCCTGGTTCAAGCAATTCTCCAGCT...GCCATCACTAACGGATCCCCAGCGTCTGTCTAATGAGCAGGAGGTGCTTCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597370.5
CDS-3UTR GCA 90 bp TGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGAGGAGGCGGAGCAGCTaGTCCTTGGAGAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: WFLPCSDNRLPKVDGTQQRRRSS*SLEKGM
Trigger: CATTCCCTTCTCCAAGGAGCAGCTGCTCCGCCTCCT...CTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp ACAGACGCTGGGGATCCGTTAGTGATGGCTGATCGAGGGTCTCCCTGTCAGGGTAGGAGGCGGAGCAGCTaGTCCTTGGAGAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: TDAGDPLVMADRGSPCQGRRRSS*SLEKGM
Trigger: CATTCCCTTCTCCAAGGAGCAGCTGCTCCGCCTCCT...ACCCTGACAGGGAGACCCTCGATCAGCCATCACTAACGGATCCCCAGCGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597370.5
ENST00000599220.1
CDS-3UTR GCA 90 bp TTGGTGGTAGTGGAACAGGGTGCAGAAGTCCACGTGGGCCGAGAACGCCTCCAAGGGTCATATAAGGCCTaGAGCCGGGCCAGGATTTGG +
Preference number: 4 (lower is better)
Translates to: LVVVEQGAEVHVGRERLQGSYKA*SRARIW
Trigger: CCAAATCCTGGCCCGGCTGCAGGCCTTATATGACCC...TTGGAGGCGTTCTCGGCCCACGTGGACTTCTGCACCCTGTTCCACTACCACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599220.1
CDS-3UTR GCA 90 bp AATTCTTATTGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGATTGAGCAGGGCGCGCTaGAGGGTGGGCGTGCGCACC +
Preference number: 4 (lower is better)
Translates to: NSYWFLPCSDNRLPKVDGLSRAR*RVGVRT
Trigger: GGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAA...TCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp TGGTGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTTGCGCGCTGCGCCGCTaGCCGAACATCTTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: WWWGDPDRGSFCRKGERPCALRR*PNILEA
Trigger: GGCCTCCAAGATGTTCGGGCAGCGGCGCAGCGCGCA...AGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp CACCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTAGTTGTTGGACGTACTaGGATAGTACAGCATGTGCG +
Preference number: 4 (lower is better)
Translates to: HLRLPGARLGASLGGEGGSCWTY*DSTACA
Trigger: CGCACATGCTGTACTATCGCAGTACGTCCAACAACT...ACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp GCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGTGGGTACAATCCCATaGTGGGGGTCAGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: ATTGCPKLMEPSSCHWTFVGTIP*WGSGPA
Trigger: TGCAGGCCCTGACCCCCAGCATGGGATTGTACCCAC...AAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp TGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGGCAGCGACAACCGGCTaGCCAAAGTTGATGGAACCC +
Preference number: 4 (lower is better)
Translates to: WFLPCSDNRLPKVDGTQQAATTG*PKLMEP
Trigger: GGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGC...CTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp TGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTGGGAGCCTCCTGCGCATGTaGAGGAGGGCGTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: WWGDPDRGSFCRKGERPGSLLRM*RRASWA
Trigger: AGCCCAGGACGCCCTCCTGCACATGCGCAGGAGGCT...CCCAGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435956.7
CDS-3UTR CCA 90 bp ACAGACGCTGGGGATCCGTTAGTGATGGCTGATCGAGGGTCTCCCTGTCAGGGTGGGTCACATGCAGCATaGCTAGACCCTTTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: TDAGDPLVMADRGSPCQGGSHAA*LDPFPG
Trigger: TCCGGGGAAAGGGTCTAGCCATGCTGCATGTGACCC...ACCCTGACAGGGAGACCCTCGATCAGCCATCACTAACGGATCCCCAGCGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597370.5
ENST00000599220.1
CDS-3UTR CCA 90 bp CTGAGCAGCTGTGATTGGCAGACACCCTCAGCTCCTCAGCCAAACCACACTTGGAGTCGCGGGGCTCCCTaGGGTTCCACATCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: LSSCDWQTPSAPQPNHTWSRGAP*GSTSCD
Trigger: ATCGCAAGATGTGGAACCCCAGGGAGCCCCGCGACT...CCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAATCACAGCTGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTGCAGCTCCGAGTTGTTaGACGTACTGCGATAGTACA +
Preference number: 4 (lower is better)
Translates to: PEVAGSQVGSESWWRGWFAAPSC*TYCDST
Trigger: TGTACTATCGCAGTACGTCCAACAACTCGGAGCTGC...AAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp TCAGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGGGACTAAGAGCCTTGAGTGCCCCCTaGCCGCCGGGCCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: SAPQPNHTWMFMVRVGLRALSAP*PPGQEA
Trigger: AGCTTCCTGGCCCGGCGGCCAGGGGGCACTCAAGGC...TCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp TGGTGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTCCGACCGGAGCCACCTaGAGGTCTCTTCGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: WWWGDPDRGSFCRKGERPPTGAT*RSLRAS
Trigger: GCTCGCCCGAAGAGACCTCCAGGTGGCTCCGGTCGG...AGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp TGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGGGTACAATCCCATGCTaGGGGTCAGGGCCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: WFLPCSDNRLPKVDGTQQGTIPC*GSGPAD
Trigger: ATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACC...CTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp AACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGCCAGCCACTGGGTCTAGTTTaGGGAAACCCGGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: NRLPKVDGTQQLSLDVCQPLGLV*GNPGVG
Trigger: ACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGG...CTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp AACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGCCAGCCCAGCAGCTGTCACTaGACGTTTGCCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: NRLPKVDGTQQLSLDVCQPSSCH*TFARRQ
Trigger: CTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTGGG...CTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CAGCAGCTGTCACTGGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACGGCGAGGGTGGTTTCTaGTTCACCTACCTAGCACAA +
Preference number: 4 (lower is better)
Translates to: QQLSLDVCQEAGLTALVHGEGGF*FTYLAQ
Trigger: TTGTGCTAGGTAGGTGAACCAGAAACCACCCTCGCC...GTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp TGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGGGGAGCGAGTCTTGGTaGCGAGGGTGGTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: WFLPCSDNRLPKVDGTQQGSESW*RGWFLV
Trigger: AACCAGAAACCACCCTCGCCACCAAGACTCGCTCCC...CTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp GGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTATTGCACAGGCTGCTaGTGGTGGGGAGATCCAGAC +
Preference number: 4 (lower is better)
Translates to: GSFPAATTGCPKLMEPSSYCTGC*WWGDPD
Trigger: GTCTGGATCTCCCCACCACCAGCAGCCTGTGCAATA...GCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp TTGGTGGTAGTGGAACAGGGTGCAGAAGTCCACGTGGGCCGAGAACGCCTCCAATCCGTTAGTGATGGCTaGTCGAGGGTCTCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: LVVVEQGAEVHVGRERLQSVSDG*SRVSLS
Trigger: TGACAGGGAGACCCTCGATCAGCCATCACTAACGGA...TTGGAGGCGTTCTCGGCCCACGTGGACTTCTGCACCCTGTTCCACTACCACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599220.1
CDS-3UTR TCA 90 bp AAATATTGCACAGGCTGCTGGTGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTCAGGGGGCAGCTTGGTaGAGAAGCCACGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: KYCTGCWWWGDPDRGSFCQGAAW*RSHAWS
Trigger: GCTCCAGGCGTGGCTTCTTCACCAAGCTGCCCCCTG...ACAGAAACTACCTCGGTCTGGATCTCCCCACCACCAGCAGCCTGTGCAATATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp TGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTGGGAGGCCCGCAGGCCCATaGAGATGGCGAAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: WWGDPDRGSFCRKGERPGRPAGP*RWRRAA
Trigger: TGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCT...CCCAGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp ACCTACCTAGCACAAGGTCTCCAACTCCTTCAGCCTAGACACCCTGATCAGCAGGGGCCCGAGTTCCGTTaGAGGTCACCTCACAGCCTG +
Preference number: 4 (lower is better)
Translates to: TYLAQGLQLLQPRHPDQQGPEFR*RSPHSL
Trigger: CAGGCTGTGAGGTGACCTTCAACGGAACTCGGGCCC...CTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp AAATATTGCACAGGCTGCTGGTGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTGCGGGGGCTCGGAAGTaGTCGGAGCCACTGGGTCTA +
Preference number: 4 (lower is better)
Translates to: KYCTGCWWWGDPDRGSFCAGARK*SEPLGL
Trigger: TAGACCCAGTGGCTCCGATCACTTCCGAGCCCCCGC...ACAGAAACTACCTCGGTCTGGATCTCCCCACCACCAGCAGCCTGTGCAATATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp GCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTAGAGCTGAGCAGCTGTaGTTGGCAGACACCCTCAGC +
Preference number: 4 (lower is better)
Translates to: ATTGCPKLMEPSSCHWTFRAEQL*LADTLS
Trigger: GCTGAGGGTGTCTGCCAATCACAGCTGCTCAGCTCT...AAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp ACCTACCTAGCACAAGGTCTCCAACTCCTTCAGCCTAGACACCCTGATCAGCAGCGGCCTTGGTGCACATaGTGGGCAGTTTGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: TYLAQGLQLLQPRHPDQQRPWCT*WAVCPE
Trigger: CTCCGGGCAAACTGCCCATCATGTGCACCAAGGCCG...CTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp GGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACATGATGGGCAGTTTACCCTGATCAGCAGCTaGCCAGTTGGCCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: GRLPGGRANGLGAHDGQFTLISS*PVGLPF
Trigger: AAATGGCAGGCCAACTGGTCAGCTGCTGATCAGGGT...AAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp AATTCTTATTGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAGGCGAGGAAGGCACCTaGGGTTGCCGGGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: NSYWFLPCSDNRLPKVDGGEEGT*GCREPG
Trigger: ACCTGGCTCCCGGCAACCTCAGGTGCCTTCCTCGCC...TCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp AGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGGGACTAAGAAAAAGCGCTCGCGGTACTaGTGGGCCCAGTCGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SSSAKPHLDVYGEGGTKKKRSRY*WAQSRG
Trigger: GCCCCGCGACTGGGCCCAGCAGTACCGCGAGCGCTT...TTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp AACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGCCAGGCCCGAAGCACCTCCTaGTCATTAGACAGACGCTGG +
Preference number: 4 (lower is better)
Translates to: NRLPKVDGTQQLSLDVCQARSTS*SLDRRW
Trigger: CCAGCGTCTGTCTAATGAGCAGGAGGTGCTTCGGGC...CTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000435956.7
CDS-3UTR GCA 90 bp AATTCTTATTGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAGCTGCAGGGTGGGCGTaGGCACCTTCAGCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: NSYWFLPCSDNRLPKVDGAAGWA*APSAPA
Trigger: TGCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGC...TCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp TCAGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGGGACTAAGAGCTGCAGGGTGGGCGTaGGCACCTTCAGCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: SAPQPNHTWMFMVRVGLRAAGWA*APSAPA
Trigger: TGCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGC...TCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp AACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGCCAGCTGTCACTGGACGTTTaGCAGGAGGCAGGGCTAACG +
Preference number: 4 (lower is better)
Translates to: NRLPKVDGTQQLSLDVCQLSLDV*QEAGLT
Trigger: CGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAG...CTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp GCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGGGTCACATGCAGCATaGCTAGACCCTTTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: ATTGCPKLMEPSSCHWTFGSHAA*LDPFPG
Trigger: TCCGGGGAAAGGGTCTAGCCATGCTGCATGTGACCC...AAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp GGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACATGATGGGCAGTTTGATACTCCCCCATTTTaGCTGCCAGCGATGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GRLPGGRANGLGAHDGQFDTPPF*LPAMRG
Trigger: CCCTCTCATCGCTGGCAGCCAAAATGGGGGAGTATC...AAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp ATTTACTGTCACCTGGACCTCATCCTGAGGGTGGTGGACCACCAGCGCGTAGGCGATACTCCCCCATTTTaGCTGCCAGCGATGAGAGGG +
Preference number: 4 (lower is better)
Translates to: IYCHLDLILRVVDHQRVGDTPPF*LPAMRG
Trigger: CCCTCTCATCGCTGGCAGCCAAAATGGGGGAGTATC...GCCTACGCGCTGGTGGTCCACCACCCTCAGGATGAGGTCCAGGTGACAGTAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597370.5
CDS-3UTR CCA 90 bp GTCTCCCTGTCAGGGTTGATGGGGTCATATAAGGCCTGCAGCCGGGCCAGGATTGATACTCCCCCATTTTaGCTGCCAGCGATGAGAGGG +
Preference number: 4 (lower is better)
Translates to: VSLSGLMGSYKACSRARIDTPPF*LPAMRG
Trigger: CCCTCTCATCGCTGGCAGCCAAAATGGGGGAGTATC...AATCCTGGCCCGGCTGCAGGCCTTATATGACCCCATCAACCCTGACAGGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599220.1
CDS-3UTR CCA 90 bp AATTCTTATTGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGACCAGCAGCGCCTCCTTaGTGTGCTCGTCCTGCGCGC +
Preference number: 4 (lower is better)
Translates to: NSYWFLPCSDNRLPKVDGPAAPP*CARPAR
Trigger: GCGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGG...TCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp GCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGGTACAATCCCATGCTaGGGGTCAGGGCCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: ATTGCPKLMEPSSCHWTFGTIPC*GSGPAD
Trigger: ATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACC...AAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGTCTTGGTGGCGAGGGTaGTTTCTGGTTCACCTACCT +
Preference number: 4 (lower is better)
Translates to: PCSDNRLPKVDGTQQLSLSWWRG*FLVHLP
Trigger: AGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGA...CAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CTGAGCAGCTGTGATTGGCAGACACCCTCAGCTCCTCAGCCAAACCACACTTGGGTTGGGAGCGAGTCTTaGTGGCGAGGGTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LSSCDWQTPSAPQPNHTWVGSES*WRGWFL
Trigger: CAGAAACCACCCTCGCCACCAAGACTCGCTCCCAAC...CCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAATCACAGCTGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp GCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGTTGGGAGCGAGTCTTaGTGGCGAGGGTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: ATTGCPKLMEPSSCHWTFVGSES*WRGWFL
Trigger: CAGAAACCACCCTCGCCACCAAGACTCGCTCCCAAC...AAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp GGCGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCCCTTGGAGAAGGGAATaGAGCGCTCGCGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: GAALTLLPGGLQKPELSSPWRRE*SARGTA
Trigger: AGCAGTACCGCGAGCGCTTCATTCCCTTCTCCAAGG...GCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp AGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTCTGGTTCACCTACCTTCTCCCTGTCAGGGTTaGTGGGGTCATATAAGGCCT +
Preference number: 4 (lower is better)
Translates to: SQVGSESWWRGWFLVHLPSPCQG*WGHIRP
Trigger: AGGCCTTATATGACCCCATCAACCCTGACAGGGAGA...AGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000435956.7
CDS-3UTR TCA 90 bp ACGTGGGCCGAGAACGCCTCCAAAGCCGCCTTCTCTGCCGGACTCGAGTGGAATGCGTGGCCAACATGGTaGAATCCTGTCTCTGTATTA +
Preference number: 4 (lower is better)
Translates to: TWAENASKAAFSAGLEWNAWPTW*NPVSVL
Trigger: TAATACAGAGACAGGATTTCACCATGTTGGCCACGC...ATTCCACTCGAGTCCGGCAGAGAAGGCGGCTTTGGAGGCGTTCTCGGCCCACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599220.1
CDS-3UTR TCA 90 bp CCTGCAGCCGGGCCAGGATTTGGTGGTAGTGGAACAGGGTGCAGAAGTCCACGTAGGCAGTGGATCACTTaGAGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: PAAGPGFGGSGTGCRSPRRQWIT*SQEFKT
Trigger: GGTCTTGAACTCCTGACTTCAAGTGATCCACTGCCT...ACGTGGACTTCTGCACCCTGTTCCACTACCACCAAATCCTGGCCCGGCTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599220.1
CDS-3UTR GCA 90 bp AACGCCTCCAAAGCCGCCTTCTCTGCCGGACTCGAGTGGAATTCCTGTAATCCCCAAAGCCGCCTTCTCTaGCGGACTCGAGTGGAATTC +
Preference number: 4 (lower is better)
Translates to: NASKAAFSAGLEWNSCNPQSRLL*RTRVEF
Trigger: GAATTCCACTCGAGTCCGGCAGAGAAGGCGGCTTTG...GGGATTACAGGAATTCCACTCGAGTCCGGCAGAGAAGGCGGCTTTGGAGGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599220.1
CDS-3UTR GCA 90 bp ACCTACCTAGCACAAGGTCTCCAACTCCTTCAGCCTAGACACCCTGATCAGCAGCCGTTTGGTCCGGGCTaGCAGGACCACCCGCTTAAA +
Preference number: 4 (lower is better)
Translates to: TYLAQGLQLLQPRHPDQQPFGPG*QDHPLK
Trigger: TTTAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGG...CTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp GGCGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCGCAGCGACAACCGGCTaGCCAAAGTTGATGGAACCC +
Preference number: 4 (lower is better)
Translates to: GAALTLLPGGLQKPELSSAATTG*PKLMEP
Trigger: GGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGC...GCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp CCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGCTGACCAGTTGGCCTaGCATTTAAGCAGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: PCSDNRLPKVDGTQQLSLADQLA*HLSSSN
Trigger: ATTGCTGCTGCTTAAATGGCAGGCCAACTGGTCAGC...CAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGTCATTAGACAGACGCTaGGGATCCGTTAGTGATGGC +
Preference number: 4 (lower is better)
Translates to: PCSDNRLPKVDGTQQLSLSLDRR*GSVSDG
Trigger: GCCATCACTAACGGATCCCCAGCGTCTGTCTAATGA...CAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000435956.7
CDS-3UTR CCA 90 bp CAGCAGCTGTCACTGGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACCAGCCAAACCACACTTaGATGTTTATGGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: QQLSLDVCQEAGLTALVHQPNHT*MFMVRV
Trigger: CACCCTCACCATAAACATCCAAGTGTGGTTTGGCTG...GTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCTGCCCAGCAGCTGTCACTaGACGTTTGCCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RSFNSSTWRFTEARAEQLPSSCH*TFARRQ
Trigger: CTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTGGG...CAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp CGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCTGCCTTGGAGAAGGGAATaGAGCGCTCGCGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: RSFNSSTWRFTEARAEQLPWRRE*SARGTA
Trigger: AGCAGTACCGCGAGCGCTTCATTCCCTTCTCCAAGG...CAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp ATAAGGCCTGCAGCCGGGCCAGGATTTGGTGGTAGTGGAACAGGGTGCAGAAGTTCTCCCTGTCAGGGTTaGTGGGGTCATATAAGGCCT +
Preference number: 4 (lower is better)
Translates to: IRPAAGPGFGGSGTGCRSSPCQG*WGHIRP
Trigger: AGGCCTTATATGACCCCATCAACCCTGACAGGGAGA...ACTTCTGCACCCTGTTCCACTACCACCAAATCCTGGCCCGGCTGCAGGCCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599220.1
CDS-3UTR TCA 90 bp AGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGGGACTAAGAAAGCGGGGGCTCGGAAGTaGTCGGAGCCACTGGGTCTA +
Preference number: 4 (lower is better)
Translates to: SSSAKPHLDVYGEGGTKKAGARK*SEPLGL
Trigger: TAGACCCAGTGGCTCCGATCACTTCCGAGCCCCCGC...TTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp CAGCAGCTGTCACTGGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACAGAGCTAAATCGCTTTaGTTGGCTGTTCATCGAAGG +
Preference number: 4 (lower is better)
Translates to: QQLSLDVCQEAGLTALVHRAKSL*LAVHRR
Trigger: CCTTCGATGAACAGCCAATCAAAGCGATTTAGCTCT...GTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp CAGACACCCTCAGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGAGAGCTGAGCAGCTGTaGTTGGCAGACACCCTCAGC +
Preference number: 4 (lower is better)
Translates to: QTPSAPQPNHTWMFMVRVRAEQL*LADTLS
Trigger: GCTGAGGGTGTCTGCCAATCACAGCTGCTCAGCTCT...CACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp GCCCGAAGCACCTCCTGCTCATTAGACAGACGCTGGGGATCCGTTAGTGATGGCAGGCAGTGGATCACTTaGAGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: ARSTSCSLDRRWGSVSDGRQWIT*SQEFKT
Trigger: GGTCTTGAACTCCTGACTTCAAGTGATCCACTGCCT...GCCATCACTAACGGATCCCCAGCGTCTGTCTAATGAGCAGGAGGTGCTTCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597370.5
CDS-3UTR GCA 90 bp TTGGGACAGGAGACGGGAGAAATTGATAGACCAATAAATATTGCACAGGCTGCTTTGAGCAGGGCGCGCTaGAGGGTGGGCGTGCGCACC +
Preference number: 4 (lower is better)
Translates to: LGQETGEIDRPINIAQAALSRAR*RVGVRT
Trigger: GGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAA...AGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp CGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCTGGCAGCGACAACCGGCTaGCCAAAGTTGATGGAACCC +
Preference number: 4 (lower is better)
Translates to: RSFNSSTWRFTEARAEQLAATTG*PKLMEP
Trigger: GGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGC...CAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp GGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACATGATGGGCAGTTTAAATATTGCACAGGCTaGTGGTGGTGGGGAGATCCA +
Preference number: 4 (lower is better)
Translates to: GRLPGGRANGLGAHDGQFKYCTG*WWWGDP
Trigger: TGGATCTCCCCACCACCAGCAGCCTGTGCAATATTT...AAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp TGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTGGGGTGCAGAAGTCCACGTaGGCCGAGAACGCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: WWGDPDRGSFCRKGERPGVQKST*AENASK
Trigger: TTTGGAGGCGTTCTCGGCCCACGTGGACTTCTGCAC...CCCAGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293261.8
CDS-3UTR CCA 90 bp GCCCGAAGCACCTCCTGCTCATTAGACAGACGCTGGGGATCCGTTAGTGATGGCTCATTAGACAGACGCTaGGGATCCGTTAGTGATGGC +
Preference number: 4 (lower is better)
Translates to: ARSTSCSLDRRWGSVSDGSLDRR*GSVSDG
Trigger: GCCATCACTAACGGATCCCCAGCGTCTGTCTAATGA...GCCATCACTAACGGATCCCCAGCGTCTGTCTAATGAGCAGGAGGTGCTTCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597370.5
CDS-3UTR CCA 90 bp GGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACATGATGGGCAGTTTGCAGCTCCGAGTTGTTaGACGTACTGCGATAGTACA +
Preference number: 4 (lower is better)
Translates to: GRLPGGRANGLGAHDGQFAAPSC*TYCDST
Trigger: TGTACTATCGCAGTACGTCCAACAACTCGGAGCTGC...AAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTTTTAACTCTTCTACCTaGCGGTTTACAGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: PEVAGSQVGSESWWRGWFFNSST*RFTEAR
Trigger: TCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAA...AAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CTGAGCAGCTGTGATTGGCAGACACCCTCAGCTCCTCAGCCAAACCACACTTGGGGCGAGGGTGGTTTCTaGTTCACCTACCTAGCACAA +
Preference number: 4 (lower is better)
Translates to: LSSCDWQTPSAPQPNHTWGEGGF*FTYLAQ
Trigger: TTGTGCTAGGTAGGTGAACCAGAAACCACCCTCGCC...CCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAATCACAGCTGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCTGGGGAGCGAGTCTTGGTaGCGAGGGTGGTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: RSFNSSTWRFTEARAEQLGSESW*RGWFLV
Trigger: AACCAGAAACCACCCTCGCCACCAAGACTCGCTCCC...CAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp CGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCTGTCCGTTAGTGATGGCTaGTCGAGGGTCTCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: RSFNSSTWRFTEARAEQLSVSDG*SRVSLS
Trigger: TGACAGGGAGACCCTCGATCAGCCATCACTAACGGA...CAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000435956.7
CDS-3UTR TCA 90 bp AATGGAACAGAAGCAGAGCTAAATCGCTTTGATTGGCTGTTCATCGAAGGGGCGACCTGGACCTCATCCTaGGGGTGGTGGACCACCAGC +
Preference number: 4 (lower is better)
Translates to: NGTEAELNRFDWLFIEGATWTSS*GWWTTS
Trigger: GCTGGTGGTCCACCACCCTCAGGATGAGGTCCAGGT...CGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAGCTCTGCTTCTGTTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000435956.7
CDS-3UTR TCA 90 bp CGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCTGCCAGCGGCGTGTCCTTaGAACTCTTCAGTACCAGGT +
Preference number: 4 (lower is better)
Translates to: RSFNSSTWRFTEARAEQLPAACP*NSSVPG
Trigger: ACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGG...CAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp CAGACACCCTCAGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGCCAGCGGCGTGTCCTTaGAACTCTTCAGTACCAGGT +
Preference number: 4 (lower is better)
Translates to: QTPSAPQPNHTWMFMVRVPAACP*NSSVPG
Trigger: ACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGG...CACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp AATGGAACAGAAGCAGAGCTAAATCGCTTTGATTGGCTGTTCATCGAAGGGGCGGGGAGGTGGCCACCTTaGGGTCGGTTAGCACCACCA +
Preference number: 4 (lower is better)
Translates to: NGTEAELNRFDWLFIEGAGRWPP*GRLAPP
Trigger: TGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCC...CGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAGCTCTGCTTCTGTTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp ACCTACCTAGCACAAGGTCTCCAACTCCTTCAGCCTAGACACCCTGATCAGCAGATTGACAGCCTGTCGTaGAGGAGGCGGGGCTTAGTT +
Preference number: 4 (lower is better)
Translates to: TYLAQGLQLLQPRHPDQQIDSLS*RRRGLV
Trigger: AACTAAGCCCCGCCTCCTTCACGACAGGCTGTCAAT...CTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp CAGCAGCTGTCACTGGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACTATAATAACCGTAATTaGCAGCCTGTCGTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: QQLSLDVCQEAGLTALVHYNNRN*QPVVKE
Trigger: CTCCTTCACGACAGGCTGTCAATTACGGTTATTATA...GTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp TTGGGACAGGAGACGGGAGAAATTGATAGACCAATAAATATTGCACAGGCTGCTGGCGAGGAAGGCACCTaGGGTTGCCGGGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LGQETGEIDRPINIAQAAGEEGT*GCREPG
Trigger: ACCTGGCTCCCGGCAACCTCAGGTGCCTTCCTCGCC...AGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp ATTTACTGTCACCTGGACCTCATCCTGAGGGTGGTGGACCACCAGCGCGTAGGCGCGTGGCCAACATGGTaGAATCCTGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: IYCHLDLILRVVDHQRVGAWPTW*NPVSTK
Trigger: TTTAGTAGAGACAGGATTTCACCATGTTGGCCACGC...GCCTACGCGCTGGTGGTCCACCACCCTCAGGATGAGGTCCAGGTGACAGTAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597370.5
CDS-3UTR GCA 90 bp AATTCTTATTGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGACCGTTTGGTCCGGGCTaGCAGGACCACCCGCTTAAA +
Preference number: 4 (lower is better)
Translates to: NSYWFLPCSDNRLPKVDGPFGPG*QDHPLK
Trigger: TTTAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGG...TCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp TTGGGACAGGAGACGGGAGAAATTGATAGACCAATAAATATTGCACAGGCTGCTGCTGCAGGGTGGGCGTaGGCACCTTCAGCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: LGQETGEIDRPINIAQAAAAGWA*APSAPA
Trigger: TGCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGC...AGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp TTGGGACAGGAGACGGGAGAAATTGATAGACCAATAAATATTGCACAGGCTGCTCCAACGCCTGCGCGCTaGGCCGCTGCCCGAACATCT +
Preference number: 4 (lower is better)
Translates to: LGQETGEIDRPINIAQAAPTPAR*AAARTS
Trigger: AGATGTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGG...AGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCTGGATACTCCCCCATTTTaGCTGCCAGCGATGAGAGGG +
Preference number: 4 (lower is better)
Translates to: RSFNSSTWRFTEARAEQLDTPPF*LPAMRG
Trigger: CCCTCTCATCGCTGGCAGCCAAAATGGGGGAGTATC...CAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp ATAAGGCCTGCAGCCGGGCCAGGATTTGGTGGTAGTGGAACAGGGTGCAGAAGTTCATTAGACAGACGCTaGGGATCCGTTAGTGATGGC +
Preference number: 4 (lower is better)
Translates to: IRPAAGPGFGGSGTGCRSSLDRR*GSVSDG
Trigger: GCCATCACTAACGGATCCCCAGCGTCTGTCTAATGA...ACTTCTGCACCCTGTTCCACTACCACCAAATCCTGGCCCGGCTGCAGGCCTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599220.1
CDS-3UTR CCA 90 bp TGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTAAATCGCTTTGATTaGCTGTTCATCGAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: WFLPCSDNRLPKVDGTQQLNRFD*LFIEGA
Trigger: CGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAG...CTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp TGGTGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTGGGAGCGAGTCTTGGTaGCGAGGGTGGTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: WWWGDPDRGSFCRKGERPGSESW*RGWFLV
Trigger: AACCAGAAACCACCCTCGCCACCAAGACTCGCTCCC...AGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp TCAGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGGGACTAAGAGGGTCATATAAGGCCTaGAGCCGGGCCAGGATTTGG +
Preference number: 4 (lower is better)
Translates to: SAPQPNHTWMFMVRVGLRGSYKA*SRARIW
Trigger: CCAAATCCTGGCCCGGCTGCAGGCCTTATATGACCC...TCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293261.8
CDS-3UTR GCA 90 bp GATTGGCTGCTTTGCTTAAGCACACAGTGCAGCAAAAATAATCACCTGTCAGTTTGCGCGCTGCGCCGCTaGCCGAACATCTTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: DWLLCLSTQCSKNNHLSVCALRR*PNILEA
Trigger: GGCCTCCAAGATGTTCGGGCAGCGGCGCAGCGCGCA...AACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAAGCAAAGCAGCCAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp AACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGCCAGAGTTGTTGGACGTACTaGGATAGTACAGCATGTGCG +
Preference number: 4 (lower is better)
Translates to: NRLPKVDGTQQLSLDVCQSCWTY*DSTACA
Trigger: CGCACATGCTGTACTATCGCAGTACGTCCAACAACT...CTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp AGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGGGACTAAGAAACTCAGGAGATGTTACTaGTGGGCGTGGCTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: SSSAKPHLDVYGEGGTKKLRRCY*WAWLAG
Trigger: CCCCGCAAGCCACGCCCAGCAGTAACATCTCCTGAG...TTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp AGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGGGACTAAGAAAAGTCGCGGGGCTCCCTaGGGTTCCACATCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: SSSAKPHLDVYGEGGTKKSRGAP*GSTSCD
Trigger: ATCGCAAGATGTGGAACCCCAGGGAGCCCCGCGACT...TTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp GGCGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCGCAGCTCCGAGTTGTTaGACGTACTGCGATAGTACA +
Preference number: 4 (lower is better)
Translates to: GAALTLLPGGLQKPELSSAAPSC*TYCDST
Trigger: TGTACTATCGCAGTACGTCCAACAACTCGGAGCTGC...GCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp AATGGAACAGAAGCAGAGCTAAATCGCTTTGATTGGCTGTTCATCGAAGGGGCGCCACTGGGTCTAGTTTaGGGAAACCCGGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: NGTEAELNRFDWLFIEGAPLGLV*GNPGVG
Trigger: ACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGG...CGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAGCTCTGCTTCTGTTCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp AATGGAACAGAAGCAGAGCTAAATCGCTTTGATTGGCTGTTCATCGAAGGGGCGAGGAGATGTTACTGCTaGGCGTGGCTTGCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: NGTEAELNRFDWLFIEGARRCYC*AWLAGA
Trigger: AGCCCCCGCAAGCCACGCCCAGCAGTAACATCTCCT...CGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAGCTCTGCTTCTGTTCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CTGAGCAGCTGTGATTGGCAGACACCCTCAGCTCCTCAGCCAAACCACACTTGGCAGCCAAACCACACTTaGATGTTTATGGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: LSSCDWQTPSAPQPNHTWQPNHT*MFMVRV
Trigger: CACCCTCACCATAAACATCCAAGTGTGGTTTGGCTG...CCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAATCACAGCTGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp ACCTACCTAGCACAAGGTCTCCAACTCCTTCAGCCTAGACACCCTGATCAGCAGTCTTGGTGGCGAGGGTaGTTTCTGGTTCACCTACCT +
Preference number: 4 (lower is better)
Translates to: TYLAQGLQLLQPRHPDQQSWWRG*FLVHLP
Trigger: AGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGA...CTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp TTGGGACAGGAGACGGGAGAAATTGATAGACCAATAAATATTGCACAGGCTGCTTGCCGGGAGCCAGGTTaGGAGCGAGTCTTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: LGQETGEIDRPINIAQAACREPG*ERVLVA
Trigger: CGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCA...AGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp TGGTGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTTATTGCACAGGCTGCTaGTGGTGGGGAGATCCAGAC +
Preference number: 4 (lower is better)
Translates to: WWWGDPDRGSFCRKGERPYCTGC*WWGDPD
Trigger: GTCTGGATCTCCCCACCACCAGCAGCCTGTGCAATA...AGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp AAATATTGCACAGGCTGCTGGTGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTTCTCCCTGTCAGGGTTaGTGGGGTCATATAAGGCCT +
Preference number: 4 (lower is better)
Translates to: KYCTGCWWWGDPDRGSFCSPCQG*WGHIRP
Trigger: AGGCCTTATATGACCCCATCAACCCTGACAGGGAGA...ACAGAAACTACCTCGGTCTGGATCTCCCCACCACCAGCAGCCTGTGCAATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000435956.7
CDS-3UTR TCA 90 bp AATTCTTATTGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAATTGACAGCCTGTCGTaGAGGAGGCGGGGCTTAGTT +
Preference number: 4 (lower is better)
Translates to: NSYWFLPCSDNRLPKVDGIDSLS*RRRGLV
Trigger: AACTAAGCCCCGCCTCCTTCACGACAGGCTGTCAAT...TCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp AATGGAACAGAAGCAGAGCTAAATCGCTTTGATTGGCTGTTCATCGAAGGGGCGAGGAGGCGGAGCAGCTaGTCCTTGGAGAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: NGTEAELNRFDWLFIEGARRRSS*SLEKGM
Trigger: CATTCCCTTCTCCAAGGAGCAGCTGCTCCGCCTCCT...CGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAGCTCTGCTTCTGTTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp GCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTGAAAAGCTCCGGCAGCAGCTaGTCCAGGCCTTCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: AHSAAKIITCQLLEVGVKSSGSS*SRPSSG
Trigger: GCCGCTGGAAGGCCTGGAGCAGCTGCTGCCGGAGCT...TTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp CGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCTGAAATATTGCACAGGCTaGTGGTGGTGGGGAGATCCA +
Preference number: 4 (lower is better)
Translates to: RSFNSSTWRFTEARAEQLKYCTG*WWWGDP
Trigger: TGGATCTCCCCACCACCAGCAGCCTGTGCAATATTT...CAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp ACCTACCTAGCACAAGGTCTCCAACTCCTTCAGCCTAGACACCCTGATCAGCAGTCTGCCGGACTCGAGTaGAATTCCTGTATTAGGAGG +
Preference number: 4 (lower is better)
Translates to: TYLAQGLQLLQPRHPDQQSAGLE*NSCIRR
Trigger: CCTCCTAATACAGGAATTCCACTCGAGTCCGGCAGA...CTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293261.8
CDS-3UTR CCA 90 bp GATTGGCTGCTTTGCTTAAGCACACAGTGCAGCAAAAATAATCACCTGTCAGTTGGGGAGAAGTTGGCCTaGGCCAGCAGGGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: DWLLCLSTQCSKNNHLSVGEKLA*ASRGSR
Trigger: TCTGGAGCCCCTGCTGGCCCAGGCCAACTTCTCCCC...AACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAAGCAAAGCAGCCAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000435956.7
CDS-3UTR CCA 90 bp TTAAGCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTGGGCGCGCTGCAGGGTaGGCGTGCGCACCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LSTQCSKNNHLSVIGSWSGRAAG*ACAPSA
Trigger: AGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCC...ACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp AATTCTTATTGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGACCTCACAGCCTGACTTaGCTAGGAGCCAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: NSYWFLPCSDNRLPKVDGPHSLT*LGASSP
Trigger: TGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGG...TCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp GCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGCTAGCTGCTTTGATTaGCTGCTTTGCTTAAGCACA +
Preference number: 4 (lower is better)
Translates to: ATTGCPKLMEPSSCHWTFASCFD*LLCLST
Trigger: TGTGCTTAAGCAAAGCAGCCAATCAAAGCAGCTAGC...AAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp GGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACATGATGGGCAGTTTGGTGGGACTAAGAAATaGAACAGAAGCAGAGCTAAA +
Preference number: 4 (lower is better)
Translates to: GRLPGGRANGLGAHDGQFGGTKK*NRSRAK
Trigger: TTTAGCTCTGCTTCTGTTCCATTTCTTAGTCCCACC...AAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp GGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTTTAGAAATTCTTATTaGTTCCTTCCCTGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: GSFPAATTGCPKLMEPSSFRNSY*FLPCSD
Trigger: GTCGCTGCAGGGAAGGAACCAATAAGAATTTCTAAA...GCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp CTTATTAAACATGATTTATTACTTTGGGACAGGAGACGGGAGAAATTGATAGACTCTTCGGGCGAGCCTTaGGTGCCCCCTGGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: LIKHDLLLWDRRREKLIDSSGEP*VPPGRR
Trigger: CCGGCGGCCAGGGGGCACTCAAGGCTCGCCCGAAGA...GTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATGTTTAATAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000377431.6
CDS-3UTR TCA 90 bp GATTGGCTGCTTTGCTTAAGCACACAGTGCAGCAAAAATAATCACCTGTCAGTTCGGCCTTGGTGCACATaGTGGGCAGTTTGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: DWLLCLSTQCSKNNHLSVRPWCT*WAVCPE
Trigger: CTCCGGGCAAACTGCCCATCATGTGCACCAAGGCCG...AACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAAGCAAAGCAGCCAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp TGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTGGGAGTTGTTGGACGTACTaGGATAGTACAGCATGTGCG +
Preference number: 4 (lower is better)
Translates to: WWGDPDRGSFCRKGERPGSCWTY*DSTACA
Trigger: CGCACATGCTGTACTATCGCAGTACGTCCAACAACT...CCCAGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp GCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTGAAAGCCTGGAGCCCACGCTaGACTTCAGGGGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: AHSAAKIITCQLLEVGVKAWSPR*TSGASA
Trigger: GGCAGATGCCCCTGAAGTCCAGCGTGGGCTCCAGGC...TTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp TGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTGGGCTAAATCGCTTTGATTaGCTGTTCATCGAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: WWGDPDRGSFCRKGERPGLNRFD*LFIEGA
Trigger: CGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAG...CCCAGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
3UTR CAA 72 bp TTGGCAGACACCCTCAGCTCCTCAGCCAAACCACACTaGGATGTTTATGGTGAGGGTGGGACTAAGAAATGG +
Preference number: 4 (lower is better)
Translates to: LADTLSSSAKPH*DVYGEGGTKKW
Trigger: CCATTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp CAGACACCCTCAGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGAGAGCTAAATCGCTTTaGTTGGCTGTTCATCGAAGG +
Preference number: 4 (lower is better)
Translates to: QTPSAPQPNHTWMFMVRVRAKSL*LAVHRR
Trigger: CCTTCGATGAACAGCCAATCAAAGCGATTTAGCTCT...CACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp TTAAGCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTGACTTCAGGGGCATCTaGCCGACTCGCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LSTQCSKNNHLSVIGSWSDFRGI*PTRWPR
Trigger: CCTGGGCCAGCGAGTCGGGCAGATGCCCCTGAAGTC...ACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp AATTCTTATTGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGATCATTAGACAGACGCTaGGGATCCGTTAGTGATGGC +
Preference number: 4 (lower is better)
Translates to: NSYWFLPCSDNRLPKVDGSLDRR*GSVSDG
Trigger: GCCATCACTAACGGATCCCCAGCGTCTGTCTAATGA...TCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000435956.7
CDS-3UTR CCA 90 bp TTAAGCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTCCAGGTGTCCCCGTTTaGTCCGGGCTGCCAGGACCA +
Preference number: 4 (lower is better)
Translates to: LSTQCSKNNHLSVIGSWSPGVPV*SGLPGP
Trigger: TGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGG...ACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp TGGTGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTCAGCCAAACCACACTTaGATGTTTATGGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: WWWGDPDRGSFCRKGERPQPNHT*MFMVRV
Trigger: CACCCTCACCATAAACATCCAAGTGTGGTTTGGCTG...AGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp AACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGCCAGTTTAGAAATTCTTATTaGTTCCTTCCCTGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: NRLPKVDGTQQLSLDVCQFRNSY*FLPCSD
Trigger: GTCGCTGCAGGGAAGGAACCAATAAGAATTTCTAAA...CTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp AATGGAACAGAAGCAGAGCTAAATCGCTTTGATTGGCTGTTCATCGAAGGGGCGGGCGAGGGTGGTTTCTaGTTCACCTACCTAGCACAA +
Preference number: 4 (lower is better)
Translates to: NGTEAELNRFDWLFIEGAGEGGF*FTYLAQ
Trigger: TTGTGCTAGGTAGGTGAACCAGAAACCACCCTCGCC...CGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAGCTCTGCTTCTGTTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CTGAGCAGCTGTGATTGGCAGACACCCTCAGCTCCTCAGCCAAACCACACTTGGCATGATTTATTACTTTaGGACAGGAGACGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: LSSCDWQTPSAPQPNHTWHDLLL*DRRREK
Trigger: TTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATG...CCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAATCACAGCTGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp TTAAGCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTAGGCCCGCAGGCCCATaGAGATGGCGAAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LSTQCSKNNHLSVIGSWSRPAGP*RWRRAA
Trigger: TGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCT...ACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp GATTGGCTGCTTTGCTTAAGCACACAGTGCAGCAAAAATAATCACCTGTCAGTTAGGAGGCGGAGCAGCTaGTCCTTGGAGAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: DWLLCLSTQCSKNNHLSVRRRSS*SLEKGM
Trigger: CATTCCCTTCTCCAAGGAGCAGCTGCTCCGCCTCCT...AACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAAGCAAAGCAGCCAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp CTTATTAAACATGATTTATTACTTTGGGACAGGAGACGGGAGAAATTGATAGACCCAACGCCTGCGCGCTaGGCCGCTGCCCGAACATCT +
Preference number: 4 (lower is better)
Translates to: LIKHDLLLWDRRREKLIDPTPAR*AAARTS
Trigger: AGATGTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGG...GTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATGTTTAATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000377431.6
CDS-3UTR GCA 90 bp GATTGGCTGCTTTGCTTAAGCACACAGTGCAGCAAAAATAATCACCTGTCAGTTTATTGGTTCCTTCCCTaGAGCGACAACCGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: DWLLCLSTQCSKNNHLSVYWFLP*SDNRLP
Trigger: GGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATA...AACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAAGCAAAGCAGCCAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp AATGGAACAGAAGCAGAGCTAAATCGCTTTGATTGGCTGTTCATCGAAGGGGCGAAATATTGCACAGGCTaGTGGTGGTGGGGAGATCCA +
Preference number: 4 (lower is better)
Translates to: NGTEAELNRFDWLFIEGAKYCTG*WWWGDP
Trigger: TGGATCTCCCCACCACCAGCAGCCTGTGCAATATTT...CGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAGCTCTGCTTCTGTTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp AATGGAACAGAAGCAGAGCTAAATCGCTTTGATTGGCTGTTCATCGAAGGGGCGCAAAGCTTCGGTCAATaGGGGCTGTCCATTTCTCAC +
Preference number: 4 (lower is better)
Translates to: NGTEAELNRFDWLFIEGAQSFGQ*GLSISH
Trigger: GTGAGAAATGGACAGCCCGCATTGACCGAAGCTTTG...CGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAGCTCTGCTTCTGTTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435956.7
CDS-3UTR CCA 90 bp TCAGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGGGACTAAGACTAAATCGCTTTGATTaGCTGTTCATCGAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: SAPQPNHTWMFMVRVGLRLNRFD*LFIEGA
Trigger: CGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAG...TCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp ACCTACCTAGCACAAGGTCTCCAACTCCTTCAGCCTAGACACCCTGATCAGCAGTTTAACTCTTCTACCTaGCGGTTTACAGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: TYLAQGLQLLQPRHPDQQFNSST*RFTEAR
Trigger: TCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAA...CTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp CTTATTAAACATGATTTATTACTTTGGGACAGGAGACGGGAGAAATTGATAGACCCACCATGCCCACGTTaGCGAAGATCGCCACGCCGG +
Preference number: 4 (lower is better)
Translates to: LIKHDLLLWDRRREKLIDPPCPR*RRSPRR
Trigger: CCGGCGTGGCGATCTTCGTCAACGTGGGCATGGTGG...GTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATGTTTAATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000377431.6
CDS-3UTR GCA 90 bp GATTGGCTGCTTTGCTTAAGCACACAGTGCAGCAAAAATAATCACCTGTCAGTTCAAAGCCGCCTTCTCTaGCGGACTCGAGTGGAATTC +
Preference number: 4 (lower is better)
Translates to: DWLLCLSTQCSKNNHLSVQSRLL*RTRVEF
Trigger: GAATTCCACTCGAGTCCGGCAGAGAAGGCGGCTTTG...AACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAAGCAAAGCAGCCAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293261.8
CDS-3UTR GCA 90 bp GCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTGAAAGCCCGAAGCACCTCCTaGTCATTAGACAGACGCTGG +
Preference number: 4 (lower is better)
Translates to: AHSAAKIITCQLLEVGVKARSTS*SLDRRW
Trigger: CCAGCGTCTGTCTAATGAGCAGGAGGTGCTTCGGGC...TTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000435956.7
CDS-3UTR CCA 90 bp TTAAGCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTAGGAGATGTTACTGCTaGGCGTGGCTTGCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LSTQCSKNNHLSVIGSWSRRCYC*AWLAGA
Trigger: AGCCCCCGCAAGCCACGCCCAGCAGTAACATCTCCT...ACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp AAATATTGCACAGGCTGCTGGTGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTGGTGGGACTAAGAAATaGAACAGAAGCAGAGCTAAA +
Preference number: 4 (lower is better)
Translates to: KYCTGCWWWGDPDRGSFCGGTKK*NRSRAK
Trigger: TTTAGCTCTGCTTCTGTTCCATTTCTTAGTCCCACC...ACAGAAACTACCTCGGTCTGGATCTCCCCACCACCAGCAGCCTGTGCAATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CAGACACCCTCAGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGTTTAGAAATTCTTATTaGTTCCTTCCCTGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: QTPSAPQPNHTWMFMVRVFRNSY*FLPCSD
Trigger: GTCGCTGCAGGGAAGGAACCAATAAGAATTTCTAAA...CACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp GCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTGAAATCCGTTAGTGATGGCTaGTCGAGGGTCTCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: AHSAAKIITCQLLEVGVKSVSDG*SRVSLS
Trigger: TGACAGGGAGACCCTCGATCAGCCATCACTAACGGA...TTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000435956.7
CDS-3UTR TCA 90 bp CTTATTAAACATGATTTATTACTTTGGGACAGGAGACGGGAGAAATTGATAGACGGGAGGTGGCCACCTTaGGGTCGGTTAGCACCACCA +
Preference number: 4 (lower is better)
Translates to: LIKHDLLLWDRRREKLIDGRWPP*GRLAPP
Trigger: TGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCC...GTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATGTTTAATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000377431.6
CDS-3UTR TCA 90 bp CTTATTAAACATGATTTATTACTTTGGGACAGGAGACGGGAGAAATTGATAGACGGGCCCGAGTTCCGTTaGAGGTCACCTCACAGCCTG +
Preference number: 4 (lower is better)
Translates to: LIKHDLLLWDRRREKLIDGPEFR*RSPHSL
Trigger: CAGGCTGTGAGGTGACCTTCAACGGAACTCGGGCCC...GTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATGTTTAATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000377431.6
CDS-3UTR TCA 90 bp AATGGAACAGAAGCAGAGCTAAATCGCTTTGATTGGCTGTTCATCGAAGGGGCGAGAGCTAAATCGCTTTaGTTGGCTGTTCATCGAAGG +
Preference number: 4 (lower is better)
Translates to: NGTEAELNRFDWLFIEGARAKSL*LAVHRR
Trigger: CCTTCGATGAACAGCCAATCAAAGCGATTTAGCTCT...CGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAGCTCTGCTTCTGTTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp TTAAGCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTTATTGGTTCCTTCCCTaGAGCGACAACCGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LSTQCSKNNHLSVIGSWSYWFLP*SDNRLP
Trigger: GGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATA...ACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp GCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTGAAACCTCACAGCCTGACTTaGCTAGGAGCCAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: AHSAAKIITCQLLEVGVKPHSLT*LGASSP
Trigger: TGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGG...TTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CTTATTAAACATGATTTATTACTTTGGGACAGGAGACGGGAGAAATTGATAGACGGGGAAACCCGGGGGTaGGTACAATCCCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: LIKHDLLLWDRRREKLIDGETRG*VQSHAG
Trigger: CCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCC...GTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATGTTTAATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000377431.6
CDS-3UTR CCA 90 bp AATGGAACAGAAGCAGAGCTAAATCGCTTTGATTGGCTGTTCATCGAAGGGGCGGCTAGCTGCTTTGATTaGCTGCTTTGCTTAAGCACA +
Preference number: 4 (lower is better)
Translates to: NGTEAELNRFDWLFIEGAASCFD*LLCLST
Trigger: TGTGCTTAAGCAAAGCAGCCAATCAAAGCAGCTAGC...CGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAGCTCTGCTTCTGTTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp CTTATTAAACATGATTTATTACTTTGGGACAGGAGACGGGAGAAATTGATAGACCCGTTTGGTCCGGGCTaGCAGGACCACCCGCTTAAA +
Preference number: 4 (lower is better)
Translates to: LIKHDLLLWDRRREKLIDPFGPG*QDHPLK
Trigger: TTTAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGG...GTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATGTTTAATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000377431.6
CDS-3UTR GCA 90 bp CTTATTAAACATGATTTATTACTTTGGGACAGGAGACGGGAGAAATTGATAGACCTCAGGAGATGTTACTaGTGGGCGTGGCTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: LIKHDLLLWDRRREKLIDLRRCY*WAWLAG
Trigger: CCCCGCAAGCCACGCCCAGCAGTAACATCTCCTGAG...GTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATGTTTAATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000377431.6
CDS-3UTR CCA 90 bp TTAAGCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTGATACTCCCCCATTTTaGCTGCCAGCGATGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LSTQCSKNNHLSVIGSWSDTPPF*LPAMRG
Trigger: CCCTCTCATCGCTGGCAGCCAAAATGGGGGAGTATC...ACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp AATTCTTATTGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGACATGATTTATTACTTTaGGACAGGAGACGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: NSYWFLPCSDNRLPKVDGHDLLL*DRRREK
Trigger: TTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATG...TCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR TCA 90 bp TTGGGACAGGAGACGGGAGAAATTGATAGACCAATAAATATTGCACAGGCTGCTTATAATAACCGTAATTaGCAGCCTGTCGTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LGQETGEIDRPINIAQAAYNNRN*QPVVKE
Trigger: CTCCTTCACGACAGGCTGTCAATTACGGTTATTATA...AGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp CTTATTAAACATGATTTATTACTTTGGGACAGGAGACGGGAGAAATTGATAGACTCTTGGTGGCGAGGGTaGTTTCTGGTTCACCTACCT +
Preference number: 4 (lower is better)
Translates to: LIKHDLLLWDRRREKLIDSWWRG*FLVHLP
Trigger: AGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGA...GTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATGTTTAATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000377431.6
CDS-3UTR TCA 90 bp GCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTGAAATATAATAACCGTAATTaGCAGCCTGTCGTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: AHSAAKIITCQLLEVGVKYNNRN*QPVVKE
Trigger: CTCCTTCACGACAGGCTGTCAATTACGGTTATTATA...TTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp TTAAGCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTTTTGATTGGCTGCTTTaGTTAAGCACACAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LSTQCSKNNHLSVIGSWSFDWLL*LSTQCS
Trigger: GCTGCACTGTGTGCTTAAGCAAAGCAGCCAATCAAA...ACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp TTAAGCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTTTTAACTCTTCTACCTaGCGGTTTACAGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: LSTQCSKNNHLSVIGSWSFNSST*RFTEAR
Trigger: TCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAA...ACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CCA 90 bp GCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTGAAACATGATTTATTACTTTaGGACAGGAGACGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: AHSAAKIITCQLLEVGVKHDLLL*DRRREK
Trigger: TTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATG...TTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR GCA 90 bp CTTATTAAACATGATTTATTACTTTGGGACAGGAGACGGGAGAAATTGATAGACTTTGATTGGCTGCTTTaGTTAAGCACACAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LIKHDLLLWDRRREKLIDFDWLL*LSTQCS
Trigger: GCTGCACTGTGTGCTTAAGCAAAGCAGCCAATCAAA...GTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATGTTTAATAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000377431.6
3UTR CAA 72 bp GCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATaGGAAGTTGGAGTGAAAAGTATAATAACCGTAATT +
Preference number: 4 (lower is better)
Translates to: AHSAAKIITCQL*EVGVKSIITVI
Trigger: AATTACGGTTATTATACTTTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS CCA 90 bp CCGGAGCCACCTGGAGGTCTCTTCGGGCGAGCCTTGAGTGCCCCCTaGCCGCCGGGCCAGGAAGCTGTGAGCCAGCAGCGCCTCCTTGGT +
Preference number: 5 (lower is better)
Translates to: PEPPGGLFGRALSAP*PPGQEAVSQQRLLG
Trigger: ACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTCAAGGCTCGCCCGAAGAGACCTCCAGGTGGCTCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000600816.1
CDS GCA 90 bp ATCGCCACGCCGGAGACTACCAGCATGAGGTTGAGCAGGGCGCGCTaGAGGGTGGGCGTGCGCACCTTCAGCTCCGGCAGCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: IATPETTSMRLSRAR*RVGVRTFSSGSSCS
Trigger: GGAGCAGCTGCTGCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000600816.1
CDS-3UTR CAA 90 bp CACCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTACCAGGTGTCCCCGTTaGGTCCGGGCTGCCAGGACC +
Preference number: 5 (lower is better)
Translates to: HLRLPGARLGASLGGEGGTRCPR*VRAART
Trigger: GGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGT...ACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS GCA 90 bp GCGCGCTGCAGGGTGGGCGTGCGCACCTTCAGCTCCGGCAGCAGCTaGTCCAGGCCTTCCAGCGGCGTGTCCTTGAAACTCTTCAGTACC +
Preference number: 5 (lower is better)
Translates to: ARCRVGVRTFSSGSS*SRPSSGVSLKLFST
Trigger: GGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGCAGCTGCTGCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000600816.1
CDS GCA 90 bp CGGAGCAGCTGCTCCTTGGAGAAGGGAATGAAGCGCTCGCGGTACTaGTGGGCCCAGTCGCGGGGCTCCCTGGGGTTCCACATCTTGCGA +
Preference number: 5 (lower is better)
Translates to: RSSCSLEKGMKRSRY*WAQSRGSLGFHILR
Trigger: TCGCAAGATGTGGAACCCCAGGGAGCCCCGCGACTGGGCCCAGCAGTACCGCGAGCGCTTCATTCCCTTCTCCAAGGAGCAGCTGCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000593914.5
ENST00000595720.5
ENST00000597370.5
ENST00000598012.1
ENST00000598926.5
ENST00000599220.1
ENST00000601332.5
ENST00000601522.1
CDS GCA 90 bp GGGAAACCCGGGGGTGGGTACAATCCCATGCTGGGGGTCAGGGCCTaGAGATGCGCCAGGGCCCGAGTTCCGTTGAAGGTCACCTCACAG +
Preference number: 5 (lower is better)
Translates to: GKPGGGYNPMLGVRA*RCARARVPLKVTSQ
Trigger: CTGTGAGGTGACCTTCAACGGAACTCGGGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000600816.1
CDS-3UTR CAA 90 bp CAGCGCGTAGGCCAGGGTGTCCTCAGACAGCGGGGAGAAGTTGGCCTGGGCCAGCGGAGCAGCTGCTCCTaGGAGAAGGGAATGAAGCGC +
Preference number: 5 (lower is better)
Translates to: QRVGQGVLRQRGEVGLGQRSSCS*EKGMKR
Trigger: GCGCTTCATTCCCTTCTCCAAGGAGCAGCTGCTCCG...CTGGCCCAGGCCAACTTCTCCCCGCTGTCTGAGGACACCCTGGCCTACGCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597370.5
CDS-3UTR CAA 90 bp GGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCGCCAGCAGCGCCTCCTaGGTGTGCTCGTCCTGCGCG +
Preference number: 5 (lower is better)
Translates to: GSFPAATTGCPKLMEPSSASSAS*VCSSCA
Trigger: CGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGGC...GCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp GGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACATGATGGGCAGTTTCTCTTCGGGCGAGCCTaGAGTGCCCCCTGGCCGCCG +
Preference number: 5 (lower is better)
Translates to: GRLPGGRANGLGAHDGQFLFGRA*SAPWPP
Trigger: CGGCGGCCAGGGGGCACTCAAGGCTCGCCCGAAGAG...AAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp CCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTGGAAGGCACCTGAGGTaGCCGGGAGCCAGGTTGGGA +
Preference number: 5 (lower is better)
Translates to: PEVAGSQVGSESWWRGWFGRHLR*PGARLG
Trigger: TCCCAACCTGGCTCCCGGCAACCTCAGGTGCCTTCC...AAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS TCA 90 bp GCGCCTCCTTGGTGTGCTCGTCCTGCGCGCGCAGGGCCAGGGCGCTaGGCAGCTCCGAGTTGTTGGACGTACTGCGATAGTACAGCATGT +
Preference number: 5 (lower is better)
Translates to: APPWCARPARAGPGR*AAPSCWTYCDSTAC
Trigger: ACATGCTGTACTATCGCAGTACGTCCAACAACTCGGAGCTGCTCAGCGCCCTGGCCCTGCGCGCGCAGGACGAGCACACCAAGGAGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000600816.1
CDS-3UTR CAA 90 bp GAGGGTGGTGGACCACCAGCGCGTAGGCCAGGGTGTCCTCAGACAGCGGGGAGACGATACTCCCCCATTTaGGCTGCCAGCGATGAGAGG +
Preference number: 5 (lower is better)
Translates to: EGGGPPARRPGCPQTAGRRYSPI*AASDER
Trigger: CCTCTCATCGCTGGCAGCCAAAATGGGGGAGTATCG...TCTCCCCGCTGTCTGAGGACACCCTGGCCTACGCGCTGGTGGTCCACCACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597370.5
CDS-3UTR CAA 90 bp CACCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTCGGAGCAGCTGCTCCTaGGAGAAGGGAATGAAGCGC +
Preference number: 5 (lower is better)
Translates to: HLRLPGARLGASLGGEGGRSSCS*EKGMKR
Trigger: GCGCTTCATTCCCTTCTCCAAGGAGCAGCTGCTCCG...ACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp CCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGCGCTGCCCGAACATCTaGGAGGCCCGCAGGCCCATG +
Preference number: 5 (lower is better)
Translates to: PCSDNRLPKVDGTQQLSLRCPNI*EARRPM
Trigger: CATGGGCCTGCGGGCCTCCAAGATGTTCGGGCAGCG...CAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp CTGAGCAGCTGTGATTGGCAGACACCCTCAGCTCCTCAGCCAAACCACACTTGGCTCTTCGGGCGAGCCTaGAGTGCCCCCTGGCCGCCG +
Preference number: 5 (lower is better)
Translates to: LSSCDWQTPSAPQPNHTWLFGRA*SAPWPP
Trigger: CGGCGGCCAGGGGGCACTCAAGGCTCGCCCGAAGAG...CCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAATCACAGCTGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp CACCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTAGGGCCCGAGTTCCGTaGAAGGTCACCTCACAGCCT +
Preference number: 5 (lower is better)
Translates to: HLRLPGARLGASLGGEGGRARVP*KVTSQP
Trigger: AGGCTGTGAGGTGACCTTCAACGGAACTCGGGCCCT...ACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp CAGCAGCTGTCACTGGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACTTGCCGGGAGCCAGGTaGGGAGCGAGTCTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: QQLSLDVCQEAGLTALVHLPGAR*GASLGG
Trigger: GCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAA...GTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS TCA 90 bp TGCTGGGGGTCAGGGCCTGCAGATGCGCCAGGGCCCGAGTTCCGTTaGAGGTCACCTCACAGCCTGACTTGGCTAGGAGCCAGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: CWGSGPADAPGPEFR*RSPHSLTWLGASSP
Trigger: TGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACGGAACTCGGGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000600816.1
CDS GCA 90 bp GGAGCCTTAGCCAAAGCTCGACTGTCATTGAGCCTCCTGCGCATGTaGAGGAGGGCGTCCTGGGCTCCCGAGGTTCGGCTTCACCCAGCA +
Preference number: 5 (lower is better)
Translates to: GALAKARLSLSLLRM*RRASWAPEVRLHPA
Trigger: TGCTGGGTGAAGCCGAACCTCGGGAGCCCAGGACGCCCTCCTGCACATGCGCAGGAGGCTCAATGACAGTCGAGCTTTGGCTAAGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435956.7
CDS CCA 90 bp AGCAGCTGCTCCTTGGAGAAGGGAATGAAGCGCTCGCGGTACTGCTaGGCCCAGTCGCGGGGCTCCCTGGGGTTCCACATCTTGCGATAC +
Preference number: 5 (lower is better)
Translates to: SSCSLEKGMKRSRYC*AQSRGSLGFHILRY
Trigger: GTATCGCAAGATGTGGAACCCCAGGGAGCCCCGCGACTGGGCCCAGCAGTACCGCGAGCGCTTCATTCCCTTCTCCAAGGAGCAGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000593914.5
ENST00000595720.5
ENST00000597370.5
ENST00000598012.1
ENST00000598926.5
ENST00000599220.1
ENST00000601332.5
ENST00000601522.1
CDS CCA 90 bp GCTCGACTGTCATTGAGCCTCCTGCGCATGTGCAGGAGGGCGTCCTaGGCTCCCGAGGTTCGGCTTCACCCAGCAGTAAAACGCATGCGC +
Preference number: 5 (lower is better)
Translates to: ARLSLSLLRMCRRAS*APEVRLHPAVKRMR
Trigger: GCGCATGCGTTTTACTGCTGGGTGAAGCCGAACCTCGGGAGCCCAGGACGCCCTCCTGCACATGCGCAGGAGGCTCAATGACAGTCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435956.7
CDS-3UTR CAA 90 bp AACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGCCAGGCCAGCAGCGCCTCCTaGGTGTGCTCGTCCTGCGCG +
Preference number: 5 (lower is better)
Translates to: NRLPKVDGTQQLSLDVCQASSAS*VCSSCA
Trigger: CGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGGC...CTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS GCA 90 bp ACACTGACCTGTCAGTCCCCTCTTGACTCTAACCTTGCTCCCTCTTaGTGCAGCTGGGGAACAAGGGCCGCCTCACCTCTCCGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: TLTCQSPLDSNLAPS*CSWGTRAASPLRRG
Trigger: CCCCCTGCGGAGAGGTGAGGCGGCCCTTGTTCCCCAGCTGCAGCAAGAGGGAGCAAGGTTAGAGTCAAGAGGGGACTGACAGGTCAGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000601332.5
CDS GCA 90 bp CTGTCACCTGCAGCCGGGCCAGGATTTGGTGGTAGTGGAACAGGGTaGAGAAGTCCACGTGGGCCGAGAACGCCTCCAAAGCCGCCTTCT +
Preference number: 5 (lower is better)
Translates to: LSPAAGPGFGGSGTG*RSPRGPRTPPKPPS
Trigger: AGAAGGCGGCTTTGGAGGCGTTCTCGGCCCACGTGGACTTCTGCACCCTGTTCCACTACCACCAAATCCTGGCCCGGCTGCAGGTGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000598926.5
CDS GCA 90 bp TCCTCACCTGCAGCCGGGCCAGGATTTGGTGGTAGTGGAACAGGGTaGAGAAGTCCACGTGGGCCGAGAACGCCTCCAAAGCCGCCTTCT +
Preference number: 5 (lower is better)
Translates to: SSPAAGPGFGGSGTG*RSPRGPRTPPKPPS
Trigger: AGAAGGCGGCTTTGGAGGCGTTCTCGGCCCACGTGGACTTCTGCACCCTGTTCCACTACCACCAAATCCTGGCCCGGCTGCAGGTGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593914.5
CDS-3UTR CAA 90 bp GTGGAACAGGGTGCAGAAGTCCACGTGGGCCGAGAACGCCTCCAAAGCCGCCTTCGGAGCAGCTGCTCCTaGGAGAAGGGAATGAAGCGC +
Preference number: 5 (lower is better)
Translates to: VEQGAEVHVGRERLQSRLRSSCS*EKGMKR
Trigger: GCGCTTCATTCCCTTCTCCAAGGAGCAGCTGCTCCG...AAGGCGGCTTTGGAGGCGTTCTCGGCCCACGTGGACTTCTGCACCCTGTTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599220.1
CDS-3UTR CAA 90 bp TGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGTTGCCGGGAGCCAGGTaGGGAGCGAGTCTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: WFLPCSDNRLPKVDGTQQLPGAR*GASLGG
Trigger: GCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAA...CTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp CCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGCGGAGCAGCTGCTCCTaGGAGAAGGGAATGAAGCGC +
Preference number: 5 (lower is better)
Translates to: PCSDNRLPKVDGTQQLSLRSSCS*EKGMKR
Trigger: GCGCTTCATTCCCTTCTCCAAGGAGCAGCTGCTCCG...CAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp AGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTCTGGTTCACCTACCTACTACCAGCATGAGGTaGAGCAGGGCGCGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SQVGSESWWRGWFLVHLPTTSMR*SRARCR
Trigger: CCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGT...AGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp CAGCAGCTGTCACTGGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACACCGGCTGCCCAAAGTaGATGGAACCCAGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: QQLSLDVCQEAGLTALVHTGCPK*MEPSSC
Trigger: ACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGT...GTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp CTGAGCAGCTGTGATTGGCAGACACCCTCAGCTCCTCAGCCAAACCACACTTGGTTGCCGGGAGCCAGGTaGGGAGCGAGTCTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: LSSCDWQTPSAPQPNHTWLPGAR*GASLGG
Trigger: GCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAA...CCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAATCACAGCTGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp GCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGGAAGGCACCTGAGGTaGCCGGGAGCCAGGTTGGGA +
Preference number: 5 (lower is better)
Translates to: ATTGCPKLMEPSSCHWTFGRHLR*PGARLG
Trigger: TCCCAACCTGGCTCCCGGCAACCTCAGGTGCCTTCC...AAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS GCA 90 bp GTCCTTGAAACTCTTCAGTACCAGGTGTCCCCGTTTGGTCCGGGCTaGCAGGACCACCCGCTTAAAGTATCTCCTCTCCGCAGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: VLETLQYQVSPFGPG*QDHPLKVSPLRRGQ
Trigger: CTGCCCCCTGCGGAGAGGAGATACTTTAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp CGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCTGACCAGGTGTCCCCGTTaGGTCCGGGCTGCCAGGACC +
Preference number: 5 (lower is better)
Translates to: RSFNSSTWRFTEARAEQLTRCPR*VRAART
Trigger: GGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGT...CAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp AACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGCCAGACTACCAGCATGAGGTaGAGCAGGGCGCGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: NRLPKVDGTQQLSLDVCQTTSMR*SRARCR
Trigger: CCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGT...CTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp CGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCTGCGCTGCCCGAACATCTaGGAGGCCCGCAGGCCCATG +
Preference number: 5 (lower is better)
Translates to: RSFNSSTWRFTEARAEQLRCPNI*EARRPM
Trigger: CATGGGCCTGCGGGCCTCCAAGATGTTCGGGCAGCG...CAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp GGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCACCTCACAGCCTGACTaGGCTAGGAGCCAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: GSFPAATTGCPKLMEPSSTSQPD*ARSQFS
Trigger: GGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGT...GCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp ATAAGGCCTGCAGCCGGGCCAGGATTTGGTGGTAGTGGAACAGGGTGCAGAAGTCAGCCGGGCCAGGATTaGGTGGTAGTGGAACAGGGT +
Preference number: 5 (lower is better)
Translates to: IRPAAGPGFGGSGTGCRSQPGQD*VVVEQG
Trigger: ACCCTGTTCCACTACCACCAAATCCTGGCCCGGCTG...ACTTCTGCACCCTGTTCCACTACCACCAAATCCTGGCCCGGCTGCAGGCCTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599220.1
CDS-3UTR CAA 90 bp CCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGTCCAGCGGCGTGTCCTaGAAACTCTTCAGTACCAGG +
Preference number: 5 (lower is better)
Translates to: PCSDNRLPKVDGTQQLSLSSGVS*KLFSTR
Trigger: CCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGA...CAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp GGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTCCAGCGGCGTGTCCTaGAAACTCTTCAGTACCAGG +
Preference number: 5 (lower is better)
Translates to: GSFPAATTGCPKLMEPSSSSGVS*KLFSTR
Trigger: CCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGA...GCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp GGCGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCACCACCATGCCCACGTaGACGAAGATCGCCACGCCG +
Preference number: 5 (lower is better)
Translates to: GAALTLLPGGLQKPELSSTTMPT*TKIATP
Trigger: CGGCGTGGCGATCTTCGTCAACGTGGGCATGGTGGT...GCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp TGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTGGGACTGCTGGGCGTGGCTaGCGGGGGCTCGGAAGTGAT +
Preference number: 5 (lower is better)
Translates to: WWGDPDRGSFCRKGERPGTAGRG*RGLGSD
Trigger: ATCACTTCCGAGCCCCCGCAAGCCACGCCCAGCAGT...CCCAGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS GCA 90 bp GCCAACATGGTGAAATCCTGTCTCTGTATTAGGAGGCGGAGCAGCTaGTCCTTGGAGAAGGGAATGAAGCGCTCGCGGTACTGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: ANMVKSCLCIRRRSS*SLEKGMKRSRYCWA
Trigger: GGCCCAGCAGTACCGCGAGCGCTTCATTCCCTTCTCCAAGGAGCAGCTGCTCCGCCTCCTAATACAGAGACAGGATTTCACCATGTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599220.1
CDS-3UTR CAA 90 bp GGACGTTTGCCAGGAGGCAGGGCTAACGGCCTTGGTGCACATGATGGGCAGTTTAAAGCTCGACTGTCATaGAGCCTCCTGCGCATGTGC +
Preference number: 5 (lower is better)
Translates to: GRLPGGRANGLGAHDGQFKARLS*SLLRMC
Trigger: GCACATGCGCAGGAGGCTCAATGACAGTCGAGCTTT...AAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000435956.7
CDS-3UTR CAA 90 bp AACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGCCAGCGATACTCCCCCATTTaGGCTGCCAGCGATGAGAGG +
Preference number: 5 (lower is better)
Translates to: NRLPKVDGTQQLSLDVCQRYSPI*AASDER
Trigger: CCTCTCATCGCTGGCAGCCAAAATGGGGGAGTATCG...CTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp GCCCGAAGCACCTCCTGCTCATTAGACAGACGCTGGGGATCCGTTAGTGATGGCGTCTCCCTGTCAGGGTaGATGGGGTCATATAAGGCC +
Preference number: 5 (lower is better)
Translates to: ARSTSCSLDRRWGSVSDGVSLSG*MGSYKA
Trigger: GGCCTTATATGACCCCATCAACCCTGACAGGGAGAC...GCCATCACTAACGGATCCCCAGCGTCTGTCTAATGAGCAGGAGGTGCTTCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597370.5
CDS-3UTR CAA 90 bp TTGGTGGTAGTGGAACAGGGTGCAGAAGTCCACGTGGGCCGAGAACGCCTCCAAGTCTCCCTGTCAGGGTaGATGGGGTCATATAAGGCC +
Preference number: 5 (lower is better)
Translates to: LVVVEQGAEVHVGRERLQVSLSG*MGSYKA
Trigger: GGCCTTATATGACCCCATCAACCCTGACAGGGAGAC...TTGGAGGCGTTCTCGGCCCACGTGGACTTCTGCACCCTGTTCCACTACCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599220.1
CDS-3UTR CAA 90 bp ACCTACCTAGCACAAGGTCTCCAACTCCTTCAGCCTAGACACCCTGATCAGCAGACTACCAGCATGAGGTaGAGCAGGGCGCGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: TYLAQGLQLLQPRHPDQQTTSMR*SRARCR
Trigger: CCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGT...CTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp CAGACACCCTCAGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGACCACCATGCCCACGTaGACGAAGATCGCCACGCCG +
Preference number: 5 (lower is better)
Translates to: QTPSAPQPNHTWMFMVRVTTMPT*TKIATP
Trigger: CGGCGTGGCGATCTTCGTCAACGTGGGCATGGTGGT...CACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp AACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTGCCAGACCGGCTGCCCAAAGTaGATGGAACCCAGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: NRLPKVDGTQQLSLDVCQTGCPK*MEPSSC
Trigger: ACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGT...CTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS TCA 90 bp GCTGAAGCTGGAGAATTGCTTGAACCAGGGAGGCGGAGGCTGCAGTaGGTCGAGATCGTGCCACTGCCCTCCAGACTAGACAACATCAAG +
Preference number: 5 (lower is better)
Translates to: AEAGELLEPGRRRLQ*VEIVPLPSRLDNIK
Trigger: CTTGATGTTGTCTAGTCTGGAGGGCAGTGGCACGATCTCGACTCACTGCAGCCTCCGCCTCCCTGGTTCAAGCAATTCTCCAGCTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597370.5
ENST00000598012.1
CDS GCA 90 bp GTCCTTGAAACTCTTCAGTACCAGGTGTCCCCGTTTGGTCCGGGCTaGCAGGACCACCCGCTTAAAGTATCTCCTGAGGGACAGAGACAG +
Preference number: 5 (lower is better)
Translates to: VLETLQYQVSPFGPG*QDHPLKVSPEGQRQ
Trigger: CTGTCTCTGTCCCTCAGGAGATACTTTAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600816.1
CDS CCA 90 bp CTGTGTCCAACCACAGGGGATCGGTTCAATCGCGCCATCGATCCCTaGTATTGGACGTGCAGATTGTTTGTTGGAATCCTGGCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: LCPTTGDRFNRAIDP*YWTCRLFVGILAVP
Trigger: CGGCACGGCCAGGATTCCAACAAACAATCTGCACGTCCAATACCAGGGATCGATGGCGCGATTGAACCGATCCCCTGTGGTTGGACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000601332.5
CDS-3UTR CAA 90 bp GCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTGTCACTGGACGTTTAAAGCTCGACTGTCATaGAGCCTCCTGCGCATGTGC +
Preference number: 5 (lower is better)
Translates to: ATTGCPKLMEPSSCHWTFKARLS*SLLRMC
Trigger: GCACATGCGCAGGAGGCTCAATGACAGTCGAGCTTT...AAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000435956.7
CDS-3UTR CAA 90 bp CAGACACCCTCAGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGCAGCCGGGCCAGGATTaGGTGGTAGTGGAACAGGGT +
Preference number: 5 (lower is better)
Translates to: QTPSAPQPNHTWMFMVRVQPGQD*VVVEQG
Trigger: ACCCTGTTCCACTACCACCAAATCCTGGCCCGGCTG...CACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293261.8
CDS-3UTR CAA 90 bp AGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGGGACTAAGAAAACCAGGTGTCCCCGTTaGGTCCGGGCTGCCAGGACC +
Preference number: 5 (lower is better)
Translates to: SSSAKPHLDVYGEGGTKKTRCPR*VRAART
Trigger: GGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGT...TTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp AAATATTGCACAGGCTGCTGGTGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTACCACCATGCCCACGTaGACGAAGATCGCCACGCCG +
Preference number: 5 (lower is better)
Translates to: KYCTGCWWWGDPDRGSFCTTMPT*TKIATP
Trigger: CGGCGTGGCGATCTTCGTCAACGTGGGCATGGTGGT...ACAGAAACTACCTCGGTCTGGATCTCCCCACCACCAGCAGCCTGTGCAATATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS TCA 90 bp AATAAGGGCCAGGCTCCAAGAAGGTGTCAGGGAATGTTTGCTAAATaGGCGGATGCTCGAACAAGCACCACAGGGCTGGAAGGGCCCCGT +
Preference number: 5 (lower is better)
Translates to: NKGQAPRRCQGMFAK*ADARTSTTGLEGPR
Trigger: ACGGGGCCCTTCCAGCCCTGTGGTGCTTGTTCGAGCATCCGCTCATTTAGCAAACATTCCCTGACACCTTCTTGGAGCCTGGCCCTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593914.5
CDS CCA 90 bp CCATCGATCCCTGGTATTGGACGTGCAGATTGTTTGTTGGAATCCTaGCCGTGCCGCATCTTCAGAATGTGGACCTCCCTCTCCGAGCCT +
Preference number: 5 (lower is better)
Translates to: PSIPGIGRADCLLES*PCRIFRMWTSLSEP
Trigger: AGGCTCGGAGAGGGAGGTCCACATTCTGAAGATGCGGCACGGCCAGGATTCCAACAAACAATCTGCACGTCCAATACCAGGGATCGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000601332.5
CDS CCA 90 bp CCAACCACAGGGGATCGGTTCAATCGCGCCATCGATCCCTGGTATTaGACGTGCAGATTGTTTGTTGGAATCCTGGCCGTGCCGCATCTT +
Preference number: 5 (lower is better)
Translates to: PTTGDRFNRAIDPWY*TCRLFVGILAVPHL
Trigger: AAGATGCGGCACGGCCAGGATTCCAACAAACAATCTGCACGTCCAATACCAGGGATCGATGGCGCGATTGAACCGATCCCCTGTGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000601332.5
CDS-3UTR CAA 90 bp GGCGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCGTCTCCCTGTCAGGGTaGATGGGGTCATATAAGGCC +
Preference number: 5 (lower is better)
Translates to: GAALTLLPGGLQKPELSSVSLSG*MGSYKA
Trigger: GGCCTTATATGACCCCATCAACCCTGACAGGGAGAC...GCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000435956.7
CDS-3UTR CAA 90 bp AATTCTTATTGGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAAGGGAGGTGGCCACCTaGAGGTCGGTTAGCACCACC +
Preference number: 5 (lower is better)
Translates to: NSYWFLPCSDNRLPKVDGREVAT*RSVSTT
Trigger: GGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCT...TCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp CGCAGCTTTAACTCTTCTACCTGGCGGTTTACAGAAGCCAGAGCTGAGCAGCTGACCTCACAGCCTGACTaGGCTAGGAGCCAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: RSFNSSTWRFTEARAEQLTSQPD*ARSQFS
Trigger: GGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGT...CAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp CACCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTATCACCTGTCAGTTATaGGAAGTTGGAGTGAAAAGT +
Preference number: 5 (lower is better)
Translates to: HLRLPGARLGASLGGEGGITCQL*EVGVKS
Trigger: ACTTTTCACTCCAACTTCCAATAACTGACAGGTGAT...ACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp TGGTGGTGGGGAGATCCAGACCGAGGTAGTTTCTGTAGAAAGGGTGAAAGACCTGGTTGGGAGCGAGTCTaGGTGGCGAGGGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: WWWGDPDRGSFCRKGERPGWERV*VARVVS
Trigger: AGAAACCACCCTCGCCACCAAGACTCGCTCCCAACC...AGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS CCA 90 bp CAATCGCGCCATCGATCCCTGGTATTGGACGTGCAGATTGTTTGTTaGAATCCTGGCCGTGCCGCATCTTCAGAATGTGGACCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: QSRHRSLVLDVQIVC*NPGRAASSECGPPS
Trigger: AGAGGGAGGTCCACATTCTGAAGATGCGGCACGGCCAGGATTCCAACAAACAATCTGCACGTCCAATACCAGGGATCGATGGCGCGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000601332.5
CDS-3UTR CAA 90 bp AGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGGGACTAAGAAAAGGGAGGTGGCCACCTaGAGGTCGGTTAGCACCACC +
Preference number: 5 (lower is better)
Translates to: SSSAKPHLDVYGEGGTKKREVAT*RSVSTT
Trigger: GGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCT...TTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp AGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTCTGGTTCACCTACCTTCAGCCAAACCACACTaGGATGTTTATGGTGAGGGT +
Preference number: 5 (lower is better)
Translates to: SQVGSESWWRGWFLVHLPSAKPH*DVYGEG
Trigger: ACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGA...AGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp TCAGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGGGACTAAGAGCTGTCACTGGACGTTaGCCAGGAGGCAGGGCTAAC +
Preference number: 5 (lower is better)
Translates to: SAPQPNHTWMFMVRVGLRAVTGR*PGGRAN
Trigger: GTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGC...TCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp CCTGAGGTTGCCGGGAGCCAGGTTGGGAGCGAGTCTTGGTGGCGAGGGTGGTTTTTTAAGCAGCAGCAATaGATAGCAAGATCAGGTTTC +
Preference number: 5 (lower is better)
Translates to: PEVAGSQVGSESWWRGWFFKQQQ*IARSGF
Trigger: GAAACCTGATCTTGCTATCAATTGCTGCTGCTTAAA...AAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS GCA 90 bp ACAGGGGATCGGTTCAATCGCGCCATCGATCCCTGGTATTGGACGTaGAGATTGTTTGTTGGAATCCTGGCCGTGCCGCATCTTCAGAAT +
Preference number: 5 (lower is better)
Translates to: TGDRFNRAIDPWYWT*RLFVGILAVPHLQN
Trigger: ATTCTGAAGATGCGGCACGGCCAGGATTCCAACAAACAATCTGCACGTCCAATACCAGGGATCGATGGCGCGATTGAACCGATCCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000601332.5
CDS-3UTR CAA 90 bp GATTGGCTGCTTTGCTTAAGCACACAGTGCAGCAAAAATAATCACCTGTCAGTTCGCTGCCCGAACATCTaGGAGGCCCGCAGGCCCATG +
Preference number: 5 (lower is better)
Translates to: DWLLCLSTQCSKNNHLSVRCPNI*EARRPM
Trigger: CATGGGCCTGCGGGCCTCCAAGATGTTCGGGCAGCG...AACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAAGCAAAGCAGCCAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp AATGGAACAGAAGCAGAGCTAAATCGCTTTGATTGGCTGTTCATCGAAGGGGCGAGGGCCCGAGTTCCGTaGAAGGTCACCTCACAGCCT +
Preference number: 5 (lower is better)
Translates to: NGTEAELNRFDWLFIEGARARVP*KVTSQP
Trigger: AGGCTGTGAGGTGACCTTCAACGGAACTCGGGCCCT...CGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAGCTCTGCTTCTGTTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp TTGGGACAGGAGACGGGAGAAATTGATAGACCAATAAATATTGCACAGGCTGCTACTGCTGGGCGTGGCTaGCGGGGGCTCGGAAGTGAT +
Preference number: 5 (lower is better)
Translates to: LGQETGEIDRPINIAQAATAGRG*RGLGSD
Trigger: ATCACTTCCGAGCCCCCGCAAGCCACGCCCAGCAGT...AGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp AGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGGGACTAAGAAAGCAGGGCTAACGGCCTaGGTGCACATGATGGGCAGT +
Preference number: 5 (lower is better)
Translates to: SSSAKPHLDVYGEGGTKKAGLTA*VHMMGS
Trigger: ACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGC...TTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp AATGGAACAGAAGCAGAGCTAAATCGCTTTGATTGGCTGTTCATCGAAGGGGCGGCTGTCACTGGACGTTaGCCAGGAGGCAGGGCTAAC +
Preference number: 5 (lower is better)
Translates to: NGTEAELNRFDWLFIEGAAVTGR*PGGRAN
Trigger: GTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGC...CGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAGCTCTGCTTCTGTTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp TTGGGACAGGAGACGGGAGAAATTGATAGACCAATAAATATTGCACAGGCTGCTAGGGAGGTGGCCACCTaGAGGTCGGTTAGCACCACC +
Preference number: 5 (lower is better)
Translates to: LGQETGEIDRPINIAQAAREVAT*RSVSTT
Trigger: GGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCT...AGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp GATTGGCTGCTTTGCTTAAGCACACAGTGCAGCAAAAATAATCACCTGTCAGTTACTGCTGGGCGTGGCTaGCGGGGGCTCGGAAGTGAT +
Preference number: 5 (lower is better)
Translates to: DWLLCLSTQCSKNNHLSVTAGRG*RGLGSD
Trigger: ATCACTTCCGAGCCCCCGCAAGCCACGCCCAGCAGT...AACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAAGCAAAGCAGCCAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp GGTTCCTTCCCTGCAGCGACAACCGGCTGCCCAAAGTTGATGGAACCCAGCAGCTTTAAGCAGCAGCAATaGATAGCAAGATCAGGTTTC +
Preference number: 5 (lower is better)
Translates to: GSFPAATTGCPKLMEPSSFKQQQ*IARSGF
Trigger: GAAACCTGATCTTGCTATCAATTGCTGCTGCTTAAA...GCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp CTTATTAAACATGATTTATTACTTTGGGACAGGAGACGGGAGAAATTGATAGACCTCTTCGGGCGAGCCTaGAGTGCCCCCTGGCCGCCG +
Preference number: 5 (lower is better)
Translates to: LIKHDLLLWDRRREKLIDLFGRA*SAPWPP
Trigger: CGGCGGCCAGGGGGCACTCAAGGCTCGCCCGAAGAG...GTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATGTTTAATAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000377431.6
CDS-3UTR CAA 90 bp TTGGGACAGGAGACGGGAGAAATTGATAGACCAATAAATATTGCACAGGCTGCTAGGGCCCGAGTTCCGTaGAAGGTCACCTCACAGCCT +
Preference number: 5 (lower is better)
Translates to: LGQETGEIDRPINIAQAARARVP*KVTSQP
Trigger: AGGCTGTGAGGTGACCTTCAACGGAACTCGGGCCCT...AGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp AGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGGGACTAAGAAATCAGCAGCTGACCAGTaGGCCTGCCATTTAAGCAGC +
Preference number: 5 (lower is better)
Translates to: SSSAKPHLDVYGEGGTKKSAADQ*ACHLSS
Trigger: GCTGCTTAAATGGCAGGCCAACTGGTCAGCTGCTGA...TTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp TTGGGACAGGAGACGGGAGAAATTGATAGACCAATAAATATTGCACAGGCTGCTGGTTGGGAGCGAGTCTaGGTGGCGAGGGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: LGQETGEIDRPINIAQAAGWERV*VARVVS
Trigger: AGAAACCACCCTCGCCACCAAGACTCGCTCCCAACC...AGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp TTAAGCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTGGAAGGCACCTGAGGTaGCCGGGAGCCAGGTTGGGA +
Preference number: 5 (lower is better)
Translates to: LSTQCSKNNHLSVIGSWSGRHLR*PGARLG
Trigger: TCCCAACCTGGCTCCCGGCAACCTCAGGTGCCTTCC...ACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp TCAGCTCCTCAGCCAAACCACACTTGGATGTTTATGGTGAGGGTGGGACTAAGATCAGCCAAACCACACTaGGATGTTTATGGTGAGGGT +
Preference number: 5 (lower is better)
Translates to: SAPQPNHTWMFMVRVGLRSAKPH*DVYGEG
Trigger: ACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGA...TCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp GCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTGAAAGCAGGGCTAACGGCCTaGGTGCACATGATGGGCAGT +
Preference number: 5 (lower is better)
Translates to: AHSAAKIITCQLLEVGVKAGLTA*VHMMGS
Trigger: ACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGC...TTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp GCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTGAAAGCTGTCACTGGACGTTaGCCAGGAGGCAGGGCTAAC +
Preference number: 5 (lower is better)
Translates to: AHSAAKIITCQLLEVGVKAVTGR*PGGRAN
Trigger: GTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGC...TTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp TTAAGCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTCGGAGCAGCTGCTCCTaGGAGAAGGGAATGAAGCGC +
Preference number: 5 (lower is better)
Translates to: LSTQCSKNNHLSVIGSWSRSSCS*EKGMKR
Trigger: GCGCTTCATTCCCTTCTCCAAGGAGCAGCTGCTCCG...ACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp ACCTACCTAGCACAAGGTCTCCAACTCCTTCAGCCTAGACACCCTGATCAGCAGATCACCTGTCAGTTATaGGAAGTTGGAGTGAAAAGT +
Preference number: 5 (lower is better)
Translates to: TYLAQGLQLLQPRHPDQQITCQL*EVGVKS
Trigger: ACTTTTCACTCCAACTTCCAATAACTGACAGGTGAT...CTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp TTAAGCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTGCAGGGCTAACGGCCTaGGTGCACATGATGGGCAGT +
Preference number: 5 (lower is better)
Translates to: LSTQCSKNNHLSVIGSWSAGLTA*VHMMGS
Trigger: ACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGC...ACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp GCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTGAAAACCGGCTGCCCAAAGTaGATGGAACCCAGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: AHSAAKIITCQLLEVGVKTGCPK*MEPSSC
Trigger: ACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGT...TTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp TTAAGCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTCGATACTCCCCCATTTaGGCTGCCAGCGATGAGAGG +
Preference number: 5 (lower is better)
Translates to: LSTQCSKNNHLSVIGSWSRYSPI*AASDER
Trigger: CCTCTCATCGCTGGCAGCCAAAATGGGGGAGTATCG...ACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp GCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTGAAAGTCTCCCTGTCAGGGTaGATGGGGTCATATAAGGCC +
Preference number: 5 (lower is better)
Translates to: AHSAAKIITCQLLEVGVKVSLSG*MGSYKA
Trigger: GGCCTTATATGACCCCATCAACCCTGACAGGGAGAC...TTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000435956.7
CDS-3UTR CAA 90 bp GCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTGAAATCCAGCGGCGTGTCCTaGAAACTCTTCAGTACCAGG +
Preference number: 5 (lower is better)
Translates to: AHSAAKIITCQLLEVGVKSSGVS*KLFSTR
Trigger: CCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGA...TTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp GCACACAGTGCAGCAAAAATAATCACCTGTCAGTTATTGGAAGTTGGAGTGAAATCAGCAGCTGACCAGTaGGCCTGCCATTTAAGCAGC +
Preference number: 5 (lower is better)
Translates to: AHSAAKIITCQLLEVGVKSAADQ*ACHLSS
Trigger: GCTGCTTAAATGGCAGGCCAACTGGTCAGCTGCTGA...TTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp CTTATTAAACATGATTTATTACTTTGGGACAGGAGACGGGAGAAATTGATAGACGGTTGGGAGCGAGTCTaGGTGGCGAGGGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: LIKHDLLLWDRRREKLIDGWERV*VARVVS
Trigger: AGAAACCACCCTCGCCACCAAGACTCGCTCCCAACC...GTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATGTTTAATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293261.8
ENST00000377431.6
CDS-3UTR CAA 90 bp TTGGGACAGGAGACGGGAGAAATTGATAGACCAATAAATATTGCACAGGCTGCTATCACCTGTCAGTTATaGGAAGTTGGAGTGAAAAGT +
Preference number: 5 (lower is better)
Translates to: LGQETGEIDRPINIAQAAITCQL*EVGVKS
Trigger: ACTTTTCACTCCAACTTCCAATAACTGACAGGTGAT...AGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS-3UTR CAA 90 bp GATTGGCTGCTTTGCTTAAGCACACAGTGCAGCAAAAATAATCACCTGTCAGTTTTTAAGCAGCAGCAATaGATAGCAAGATCAGGTTTC +
Preference number: 5 (lower is better)
Translates to: DWLLCLSTQCSKNNHLSVFKQQQ*IARSGF
Trigger: GAAACCTGATCTTGCTATCAATTGCTGCTGCTTAAA...AACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAAGCAAAGCAGCCAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS CCA 72 bp CCTGGAGGTCTCTTCGGGCGAGCCTTGAGTGCCCCCTaGCCGCCGGGCCAGGAAGCTGTGAGCCAGCAGCGC +
Preference number: 6 (lower is better)
Translates to: PGGLFGRALSAP*PPGQEAVSQQR
Trigger: GCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTCAAGGCTCGCCCGAAGAGACCTCCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000600816.1
CDS GCA 72 bp CCGGAGACTACCAGCATGAGGTTGAGCAGGGCGCGCTaGAGGGTGGGCGTGCGCACCTTCAGCTCCGGCAGC +
Preference number: 6 (lower is better)
Translates to: PETTSMRLSRAR*RVGVRTFSSGS
Trigger: GCTGCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000600816.1
CDS GCA 72 bp AGTACAGCATGTGCGCCAGCTCCAACGCCTGCGCGCTaGGCCGCTGCCCGAACATCTTGGAGGCCCGCAGGC +
Preference number: 6 (lower is better)
Translates to: STACAPAPTPAR*AAARTSWRPAG
Trigger: GCCTGCGGGCCTCCAAGATGTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000600816.1
CDS CAA 90 bp CCCACGTTGACGAAGATCGCCACGCCGGAGACTACCAGCATGAGGTaGAGCAGGGCGCGCTGCAGGGTGGGCGTGCGCACCTTCAGCTCC +
Preference number: 6 (lower is better)
Translates to: PTLTKIATPETTSMR*SRARCRVGVRTFSS
Trigger: GGAGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGATCTTCGTCAACGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000600816.1
CDS GCA 72 bp TGCTCCTTGGAGAAGGGAATGAAGCGCTCGCGGTACTaGTGGGCCCAGTCGCGGGGCTCCCTGGGGTTCCAC +
Preference number: 6 (lower is better)
Translates to: CSLEKGMKRSRY*WAQSRGSLGFH
Trigger: GTGGAACCCCAGGGAGCCCCGCGACTGGGCCCAGCAGTACCGCGAGCGCTTCATTCCCTTCTCCAAGGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000593914.5
ENST00000595720.5
ENST00000597370.5
ENST00000598012.1
ENST00000598926.5
ENST00000599220.1
ENST00000601332.5
ENST00000601522.1
CDS GCA 72 bp AGGGTGGGCGTGCGCACCTTCAGCTCCGGCAGCAGCTaGTCCAGGCCTTCCAGCGGCGTGTCCTTGAAACTC +
Preference number: 6 (lower is better)
Translates to: RVGVRTFSSGSS*SRPSSGVSLKL
Trigger: GAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGCAGCTGCTGCCGGAGCTGAAGGTGCGCACGCCCACCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000600816.1
CDS GCA 72 bp GGGGGTGGGTACAATCCCATGCTGGGGGTCAGGGCCTaGAGATGCGCCAGGGCCCGAGTTCCGTTGAAGGTC +
Preference number: 6 (lower is better)
Translates to: GGGYNPMLGVRA*RCARARVPLKV
Trigger: GACCTTCAACGGAACTCGGGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000600816.1
CDS TCA 72 bp TGGTGTGCTCGTCCTGCGCGCGCAGGGCCAGGGCGCTaGGCAGCTCCGAGTTGTTGGACGTACTGCGATAGT +
Preference number: 6 (lower is better)
Translates to: WCARPARAGPGR*AAPSCWTYCDS
Trigger: ACTATCGCAGTACGTCCAACAACTCGGAGCTGCTCAGCGCCCTGGCCCTGCGCGCGCAGGACGAGCACACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000600816.1
CDS CCA 72 bp TCCTTGGAGAAGGGAATGAAGCGCTCGCGGTACTGCTaGGCCCAGTCGCGGGGCTCCCTGGGGTTCCACATC +
Preference number: 6 (lower is better)
Translates to: SLEKGMKRSRYC*AQSRGSLGFHI
Trigger: GATGTGGAACCCCAGGGAGCCCCGCGACTGGGCCCAGCAGTACCGCGAGCGCTTCATTCCCTTCTCCAAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000593914.5
ENST00000595720.5
ENST00000597370.5
ENST00000598012.1
ENST00000598926.5
ENST00000599220.1
ENST00000601332.5
ENST00000601522.1
CDS CAA 90 bp TGCGCCAGGGCCCGAGTTCCGTTGAAGGTCACCTCACAGCCTGACTaGGCTAGGAGCCAGTTCTCCACCTCCGACCGGAGCCACCTGGAG +
Preference number: 6 (lower is better)
Translates to: CARARVPLKVTSQPD*ARSQFSTSDRSHLE
Trigger: CTCCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACGGAACTCGGGCCCTGGCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000600816.1
CDS TCA 72 bp TCAGGGCCTGCAGATGCGCCAGGGCCCGAGTTCCGTTaGAGGTCACCTCACAGCCTGACTTGGCTAGGAGCC +
Preference number: 6 (lower is better)
Translates to: SGPADAPGPEFR*RSPHSLTWLGA
Trigger: GGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACGGAACTCGGGCCCTGGCGCATCTGCAGGCCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000600816.1
CDS GCA 72 bp GCCAAAGCTCGACTGTCATTGAGCCTCCTGCGCATGTaGAGGAGGGCGTCCTGGGCTCCCGAGGTTCGGCTT +
Preference number: 6 (lower is better)
Translates to: AKARLSLSLLRM*RRASWAPEVRL
Trigger: AAGCCGAACCTCGGGAGCCCAGGACGCCCTCCTGCACATGCGCAGGAGGCTCAATGACAGTCGAGCTTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435956.7
CDS CAA 72 bp GTCAGGGCCTGCAGATGCGCCAGGGCCCGAGTTCCGTaGAAGGTCACCTCACAGCCTGACTTGGCTAGGAGC +
Preference number: 6 (lower is better)
Translates to: VRACRCARARVP*KVTSQPDLARS
Trigger: GCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACGGAACTCGGGCCCTGGCGCATCTGCAGGCCCTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000600816.1
CDS CAA 90 bp ATGCTGGGGGTCAGGGCCTGCAGATGCGCCAGGGCCCGAGTTCCGTaGAAGGTCACCTCACAGCCTGACTTGGCTAGGAGCCAGTTCTCC +
Preference number: 6 (lower is better)
Translates to: MLGVRACRCARARVP*KVTSQPDLARSQFS
Trigger: GGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACGGAACTCGGGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000600816.1
CDS TCA 72 bp TGTTACTGCTGGGCGTGGCTTGCGGGGGCTCGGAAGTaGTCGGAGCCACTGGGTCTAGTTTGGGGAAACCCG +
Preference number: 6 (lower is better)
Translates to: CYCWAWLAGARK*SEPLGLVWGNP
Trigger: CGGGTTTCCCCAAACTAGACCCAGTGGCTCCGATCACTTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS CAA 72 bp GCCCGAGTTCCGTTGAAGGTCACCTCACAGCCTGACTaGGCTAGGAGCCAGTTCTCCACCTCCGACCGGAGC +
Preference number: 6 (lower is better)
Translates to: ARVPLKVTSQPD*ARSQFSTSDRS
Trigger: GCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACGGAACTCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000600816.1
CDS CAA 90 bp AGGGAGGTGGCCACCTTGAGGTCGGTTAGCACCACCATGCCCACGTaGACGAAGATCGCCACGCCGGAGACTACCAGCATGAGGTTGAGC +
Preference number: 6 (lower is better)
Translates to: REVATLRSVSTTMPT*TKIATPETTSMRLS
Trigger: GCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGATCTTCGTCAACGTGGGCATGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000600816.1
CDS TCA 72 bp GCAGCAGCTGCTCCAGGCCTTCCAGCGGCGTGTCCTTaGAACTCTTCAGTACCAGGTGTCCCCGTTTGGTCC +
Preference number: 6 (lower is better)
Translates to: AAAAPGLPAACP*NSSVPGVPVWS
Trigger: GGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGCAGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000600816.1
CDS CCA 72 bp TCATTGAGCCTCCTGCGCATGTGCAGGAGGGCGTCCTaGGCTCCCGAGGTTCGGCTTCACCCAGCAGTAAAA +
Preference number: 6 (lower is better)
Translates to: SLSLLRMCRRAS*APEVRLHPAVK
Trigger: TTTTACTGCTGGGTGAAGCCGAACCTCGGGAGCCCAGGACGCCCTCCTGCACATGCGCAGGAGGCTCAATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435956.7
CDS CAA 72 bp GGCAGCAGCTGCTCCAGGCCTTCCAGCGGCGTGTCCTaGAAACTCTTCAGTACCAGGTGTCCCCGTTTGGTC +
Preference number: 6 (lower is better)
Translates to: GSSCSRPSSGVS*KLFSTRCPRLV
Trigger: GACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGCAGCTGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000600816.1
CDS CAA 72 bp GCCACCTTGAGGTCGGTTAGCACCACCATGCCCACGTaGACGAAGATCGCCACGCCGGAGACTACCAGCATG +
Preference number: 6 (lower is better)
Translates to: ATLRSVSTTMPT*TKIATPETTSM
Trigger: CATGCTGGTAGTCTCCGGCGTGGCGATCTTCGTCAACGTGGGCATGGTGGTGCTAACCGACCTCAAGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000600816.1
CDS CAA 72 bp AGGTTCTACTCAGGAGATGTTACTGCTGGGCGTGGCTaGCGGGGGCTCGGAAGTGATCGGAGCCACTGGGTC +
Preference number: 6 (lower is better)
Translates to: RFYSGDVTAGRG*RGLGSDRSHWV
Trigger: GACCCAGTGGCTCCGATCACTTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS TCA 72 bp CTTCCCGCCTGGGGCCCAGACACCCAAACCAGACACTaGCCTGTCAGTCCCCTCTTGACTCTAACCTTGCTC +
Preference number: 6 (lower is better)
Translates to: LPAWGPDTQTRH*PVSPLLTLTLL
Trigger: GAGCAAGGTTAGAGTCAAGAGGGGACTGACAGGTCAGTGTCTGGTTTGGGTGTCTGGGCCCCAGGCGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000601332.5
CDS GCA 72 bp ACTCTTCAGTACCAGGTGTCCCCGTTTGGTCCGGGCTaGCAGGACCACCCGCTTAAAGTATCTCCTCTCCGC +
Preference number: 6 (lower is better)
Translates to: TLQYQVSPFGPG*QDHPLKVSPLR
Trigger: GCGGAGAGGAGATACTTTAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS GCA 72 bp TGTCAGTCCCCTCTTGACTCTAACCTTGCTCCCTCTTaGTGCAGCTGGGGAACAAGGGCCGCCTCACCTCTC +
Preference number: 6 (lower is better)
Translates to: CQSPLDSNLAPS*CSWGTRAASPL
Trigger: GAGAGGTGAGGCGGCCCTTGTTCCCCAGCTGCAGCAAGAGGGAGCAAGGTTAGAGTCAAGAGGGGACTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000601332.5
CDS CAA 90 bp TCCAGCGGCGTGTCCTTGAAACTCTTCAGTACCAGGTGTCCCCGTTaGGTCCGGGCTGCCAGGACCACCCGCTTAAAGTATCTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: SSGVSLKLFSTRCPR*VRAARTTRLKYLLS
Trigger: GGAGAGGAGATACTTTAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
CDS CAA 90 bp TCCAGCGGCGTGTCCTTGAAACTCTTCAGTACCAGGTGTCCCCGTTaGGTCCGGGCTGCCAGGACCACCCGCTTAAAGTATCTCCTGAGG +
Preference number: 6 (lower is better)
Translates to: SSGVSLKLFSTRCPR*VRAARTTRLKYLLR
Trigger: CCTCAGGAGATACTTTAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600816.1
CDS GCA 72 bp ACTCTTCAGTACCAGGTGTCCCCGTTTGGTCCGGGCTaGCAGGACCACCCGCTTAAAGTATCTCCTGAGGGA +
Preference number: 6 (lower is better)
Translates to: TLQYQVSPFGPG*QDHPLKVSPEG
Trigger: TCCCTCAGGAGATACTTTAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600816.1
CDS GCA 72 bp CTCGAGTGGAATTCCTGTATTAGGAGGCGGAGCAGCTaGTCCTTGGAGAAGGGAATGAAGCGCTCGCGGTAC +
Preference number: 6 (lower is better)
Translates to: LEWNSCIRRRSS*SLEKGMKRSRY
Trigger: GTACCGCGAGCGCTTCATTCCCTTCTCCAAGGAGCAGCTGCTCCGCCTCCTAATACAGGAATTCCACTCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293261.8
ENST00000593914.5
ENST00000595720.5
ENST00000598926.5
ENST00000601522.1
CDS GCA 72 bp GGGTCATATAAGGCCTGTATTAGGAGGCGGAGCAGCTaGTCCTTGGAGAAGGGAATGAAGCGCTCGCGGTAC +
Preference number: 6 (lower is better)
Translates to: GSYKACIRRRSS*SLEKGMKRSRY
Trigger: GTACCGCGAGCGCTTCATTCCCTTCTCCAAGGAGCAGCTGCTCCGCCTCCTAATACAGGCCTTATATGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435956.7
CDS CAA 90 bp TCCAACCACAGGGGATCGGTTCAATCGCGCCATCGATCCCTGGTATaGGACGTGCAGATTGTTTGTTGGAATCCTGGCCGTGCCGCATCT +
Preference number: 6 (lower is better)
Translates to: SNHRGSVQSRHRSLV*DVQIVCWNPGRAAS
Trigger: AGATGCGGCACGGCCAGGATTCCAACAAACAATCTGCACGTCCAATACCAGGGATCGATGGCGCGATTGAACCGATCCCCTGTGGTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000601332.5
CDS GCA 72 bp CGGTTCAATCGCGCCATCGATCCCTGGTATTGGACGTaGAGATTGTTTGTTGGAATCCTGGCCGTGCCGCAT +
Preference number: 6 (lower is better)
Translates to: RFNRAIDPWYWT*RLFVGILAVPH
Trigger: ATGCGGCACGGCCAGGATTCCAACAAACAATCTGCACGTCCAATACCAGGGATCGATGGCGCGATTGAACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000601332.5
CDS GCA 72 bp GTGAAATCCTGTCTCTGTATTAGGAGGCGGAGCAGCTaGTCCTTGGAGAAGGGAATGAAGCGCTCGCGGTAC +
Preference number: 6 (lower is better)
Translates to: VKSCLCIRRRSS*SLEKGMKRSRY
Trigger: GTACCGCGAGCGCTTCATTCCCTTCTCCAAGGAGCAGCTGCTCCGCCTCCTAATACAGAGACAGGATTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599220.1
CDS CCA 72 bp GGGGATCGGTTCAATCGCGCCATCGATCCCTGGTATTaGACGTGCAGATTGTTTGTTGGAATCCTGGCCGTG +
Preference number: 6 (lower is better)
Translates to: GDRFNRAIDPWY*TCRLFVGILAV
Trigger: CACGGCCAGGATTCCAACAAACAATCTGCACGTCCAATACCAGGGATCGATGGCGCGATTGAACCGATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000601332.5
CDS CCA 72 bp AACGCCTCCAAAGCCGCCTTCTCTGCCGGACTCGAGTaGAATTCCTGTTACCTTAGCCAAAGCTCGACTGTC +
Preference number: 6 (lower is better)
Translates to: NASKAAFSAGLE*NSCYLSQSSTV
Trigger: GACAGTCGAGCTTTGGCTAAGGTAACAGGAATTCCACTCGAGTCCGGCAGAGAAGGCGGCTTTGGAGGCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598258.5
CDS CAA 72 bp GTGTCCTTGAAACTCTTCAGTACCAGGTGTCCCCGTTaGGTCCGGGCTGCCAGGACCACCCGCTTAAAGTAT +
Preference number: 6 (lower is better)
Translates to: VSLKLFSTRCPR*VRAARTTRLKY
Trigger: ATACTTTAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293261.8
ENST00000377431.6
ENST00000435956.7
ENST00000600816.1
CDS CAA 90 bp TCAATCGCGCCATCGATCCCTGGTATTGGACGTGCAGATTGTTTGTaGGAATCCTGGCCGTGCCGCATCTTCAGAATGTGGACCTCCCTC +
Preference number: 6 (lower is better)
Translates to: SIAPSIPGIGRADCL*ESWPCRIFRMWTSL
Trigger: GAGGGAGGTCCACATTCTGAAGATGCGGCACGGCCAGGATTCCAACAAACAATCTGCACGTCCAATACCAGGGATCGATGGCGCGATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000601332.5
CDS CAA 90 bp GGTTCAATCGCGCCATCGATCCCTGGTATTGGACGTGCAGATTGTTaGTTGGAATCCTGGCCGTGCCGCATCTTCAGAATGTGGACCTCC +
Preference number: 6 (lower is better)
Translates to: GSIAPSIPGIGRADC*LESWPCRIFRMWTS
Trigger: GGAGGTCCACATTCTGAAGATGCGGCACGGCCAGGATTCCAACAAACAATCTGCACGTCCAATACCAGGGATCGATGGCGCGATTGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000601332.5
CDS GCA 72 bp ACAACATCAAGACTCTGTATTAGGAGGCGGAGCAGCTaGTCCTTGGAGAAGGGAATGAAGCGCTCGCGGTAC +
Preference number: 6 (lower is better)
Translates to: TTSRLCIRRRSS*SLEKGMKRSRY
Trigger: GTACCGCGAGCGCTTCATTCCCTTCTCCAAGGAGCAGCTGCTCCGCCTCCTAATACAGAGTCTTGATGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597370.5
ENST00000598012.1
CDS CCA 72 bp CCTGGTATTGGACGTGCAGATTGTTTGTTGGAATCCTaGCCGTGCCGCATCTTCAGAATGTGGACCTCCCTC +
Preference number: 6 (lower is better)
Translates to: PGIGRADCLLES*PCRIFRMWTSL
Trigger: GAGGGAGGTCCACATTCTGAAGATGCGGCACGGCCAGGATTCCAACAAACAATCTGCACGTCCAATACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000601332.5
CDS CAA 72 bp GCGCCATCGATCCCTGGTATTGGACGTGCAGATTGTTaGTTGGAATCCTGGCCGTGCCGCATCTTCAGAATG +
Preference number: 6 (lower is better)
Translates to: APSIPGIGRADC*LESWPCRIFRM
Trigger: CATTCTGAAGATGCGGCACGGCCAGGATTCCAACAAACAATCTGCACGTCCAATACCAGGGATCGATGGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000601332.5
CDS CAA 72 bp AATCGCGCCATCGATCCCTGGTATTGGACGTGCAGATaGTTTGTTGGAATCCTGGCCGTGCCGCATCTTCAG +
Preference number: 6 (lower is better)
Translates to: NRAIDPWYWTCR*FVGILAVPHLQ
Trigger: CTGAAGATGCGGCACGGCCAGGATTCCAACAAACAATCTGCACGTCCAATACCAGGGATCGATGGCGCGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000601332.5
CDS CAA 72 bp AGGGGATCGGTTCAATCGCGCCATCGATCCCTGGTATaGGACGTGCAGATTGTTTGTTGGAATCCTGGCCGT +
Preference number: 6 (lower is better)
Translates to: RGSVQSRHRSLV*DVQIVCWNPGR
Trigger: ACGGCCAGGATTCCAACAAACAATCTGCACGTCCAATACCAGGGATCGATGGCGCGATTGAACCGATCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000601332.5
CDS CAA 90 bp GATCGGTTCAATCGCGCCATCGATCCCTGGTATTGGACGTGCAGATaGTTTGTTGGAATCCTGGCCGTGCCGCATCTTCAGAATGTGGAC +
Preference number: 6 (lower is better)
Translates to: DRFNRAIDPWYWTCR*FVGILAVPHLQNVD
Trigger: GTCCACATTCTGAAGATGCGGCACGGCCAGGATTCCAACAAACAATCTGCACGTCCAATACCAGGGATCGATGGCGCGATTGAACCGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000601332.5
CDS TCA 72 bp CAGGCTCCAAGAAGGTGTCAGGGAATGTTTGCTAAATaGGCGGATGCTCGAACAAGCACCACAGGGCTGGAA +
Preference number: 6 (lower is better)
Translates to: QAPRRCQGMFAK*ADARTSTTGLE
Trigger: TTCCAGCCCTGTGGTGCTTGTTCGAGCATCCGCTCATTTAGCAAACATTCCCTGACACCTTCTTGGAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593914.5
CDS GCA 72 bp AAATTTACTGTCACCTGTATTAGGAGGCGGAGCAGCTaGTCCTTGGAGAAGGGAATGAAGCGCTCGCGGTAC +
Preference number: 6 (lower is better)
Translates to: KFTVTCIRRRSS*SLEKGMKRSRY
Trigger: GTACCGCGAGCGCTTCATTCCCTTCTCCAAGGAGCAGCTGCTCCGCCTCCTAATACAGGTGACAGTAAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377431.6
ENST00000601332.5
CDS CCA 72 bp TTGTTGGAATCCTGGCCGTGCCGCATCTTCAGAATGTaGACCTCCCTCTCCGAGCCTCAGTTTTCCTTATTG +
Preference number: 6 (lower is better)
Translates to: LLESWPCRIFRM*TSLSEPQFSLL
Trigger: CAATAAGGAAAACTGAGGCTCGGAGAGGGAGGTCCACATTCTGAAGATGCGGCACGGCCAGGATTCCAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000601332.5
CDS CCA 72 bp ACCACAGGGGATCGGTTCAATCGCGCCATCGATCCCTaGTATTGGACGTGCAGATTGTTTGTTGGAATCCTG +
Preference number: 6 (lower is better)
Translates to: TTGDRFNRAIDP*YWTCRLFVGIL
Trigger: CAGGATTCCAACAAACAATCTGCACGTCCAATACCAGGGATCGATGGCGCGATTGAACCGATCCCCTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000601332.5
CDS CAA 72 bp CCATCGATCCCTGGTATTGGACGTGCAGATTGTTTGTaGGAATCCTGGCCGTGCCGCATCTTCAGAATGTGG +
Preference number: 6 (lower is better)
Translates to: PSIPGIGRADCL*ESWPCRIFRMW
Trigger: CCACATTCTGAAGATGCGGCACGGCCAGGATTCCAACAAACAATCTGCACGTCCAATACCAGGGATCGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000601332.5
CDS CAA 90 bp GCACTTAAAATAAGGGCCAGGCTCCAAGAAGGTGTCAGGGAATGTTaGCTAAATGAGCGGATGCTCGAACAAGCACCACAGGGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: ALKIRARLQEGVREC*LNERMLEQAPQGWK
Trigger: CTTCCAGCCCTGTGGTGCTTGTTCGAGCATCCGCTCATTTAGCAAACATTCCCTGACACCTTCTTGGAGCCTGGCCCTTATTTTAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593914.5
CDS CCA 72 bp CATCGATCCCTGGTATTGGACGTGCAGATTGTTTGTTaGAATCCTGGCCGTGCCGCATCTTCAGAATGTGGA +
Preference number: 6 (lower is better)
Translates to: HRSLVLDVQIVC*NPGRAASSECG
Trigger: TCCACATTCTGAAGATGCGGCACGGCCAGGATTCCAACAAACAATCTGCACGTCCAATACCAGGGATCGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000601332.5
CDS CAA 72 bp ATAAGGGCCAGGCTCCAAGAAGGTGTCAGGGAATGTTaGCTAAATGAGCGGATGCTCGAACAAGCACCACAG +
Preference number: 6 (lower is better)
Translates to: IRARLQEGVREC*LNERMLEQAPQ
Trigger: CTGTGGTGCTTGTTCGAGCATCCGCTCATTTAGCAAACATTCCCTGACACCTTCTTGGAGCCTGGCCCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593914.5
CDS CAA 90 bp ATCCTTTCTCTTCCCCTGGGAATCAAGTGTAGTACTCACTTTCCCTaGAGAAGAAAAGACAGCATTTGGATGAGTCACGCCTCCCATTTC +
Preference number: 6 (lower is better)
Translates to: ILSLPLGIKCSTHFP*RRKDSIWMSHASHF
Trigger: GAAATGGGAGGCGTGACTCATCCAAATGCTGTCTTTTCTTCTCAAGGGAAAGTGAGTACTACACTTGATTCCCAGGGGAAGAGAAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595720.5
ENST00000601332.5