Pregenerated sensors for TMEM141 (Homo sapiens)
Ensembl gene IDs: ENSG00000244187Ensembl transcript IDs: ENST00000290079.9, ENST00000465017.5, ENST00000479737.1, ENST00000483187.5, ENST00000484854.1, ENST00000489739.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCCTTCGACCCCGTGTCCCATAGGTGGTGGCCCCCAGACACACCCTCTCTGCTGGGGTACCCTAGGGTGTaGGGAGGGTCGGCCTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: PFDPVSHRWWPPDTPSLLGYPRV*GGSAWG Trigger: ACCCCAGGCCGACCCTCCCCACACCCTAGGGTACCC...CAGCAGAGAGGGTGTGTCTGGGGGCCACCACCTATGGGACACGGGGTCGAAGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| 3UTR-3UTR TCA 90 bp | GAACATGCATCCCAATACCCTAGAGGAGAAACACCACCCCAGGGAGAGCCCTTTTGGGGTCAGGGGGCATaGAGGCTGTGTTCCAGACTC | + |
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Preference number: 2 (lower is better) Translates to: EHASQYPRGETPPQGEPFWGQGA*RLCSRL Trigger: GAGTCTGGAACACAGCCTTCATGCCCCCTGACCCCA...AAAGGGCTCTCCCTGGGGTGGTGTTTCTCCTCTAGGGTATTGGGATGCATGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| 3UTR-3UTR GCA 90 bp | GAACATGCATCCCAATACCCTAGAGGAGAAACACCACCCCAGGGAGAGCCCTTTGGGGCAGCAGCCATCTaGAGGTGTTTGTCAGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: EHASQYPRGETPPQGEPFGAAAI*RCLSGL Trigger: CAGGCCTGACAAACACCTGCAGATGGCTGCTGCCCC...AAAGGGCTCTCCCTGGGGTGGTGTTTCTCCTCTAGGGTATTGGGATGCATGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| 3UTR-3UTR CCA 90 bp | CTGTCATCATCTTACCCTTCTGATTTGTTTTTCACCTGGTCAGGTGGAAACTTGCCCGTGTCCCATAGGTaGTGGCCCCCAGACACACCC | + |
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Preference number: 2 (lower is better) Translates to: LSSSYPSDLFFTWSGGNLPVSHR*WPPDTP Trigger: GGGTGTGTCTGGGGGCCACCACCTATGGGACACGGG...CAAGTTTCCACCTGACCAGGTGAAAAACAAATCAGAAGGGTAAGATGATGACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| 3UTR-3UTR TCA 90 bp | CTGTCATCATCTTACCCTTCTGATTTGTTTTTCACCTGGTCAGGTGGAAACTTGGGGCTAGAAAGGAAATaGCAGAGTGTACAGGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: LSSSYPSDLFFTWSGGNLGLERK*QSVQAP Trigger: AGGGGCCTGTACACTCTGTCATTTCCTTTCTAGCCC...CAAGTTTCCACCTGACCAGGTGAAAAACAAATCAGAAGGGTAAGATGATGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| 3UTR-3UTR GCA 90 bp | CTGTCATCATCTTACCCTTCTGATTTGTTTTTCACCTGGTCAGGTGGAAACTTGCCTCTCTGCTGGCAGTaGAGAACATGCATCCCAATA | + |
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Preference number: 2 (lower is better) Translates to: LSSSYPSDLFFTWSGGNLPLCWQ*RTCIPI Trigger: TATTGGGATGCATGTTCTGCACTGCCAGCAGAGAGG...CAAGTTTCCACCTGACCAGGTGAAAAACAAATCAGAAGGGTAAGATGATGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| 3UTR-3UTR CAA 90 bp | CTGTCATCATCTTACCCTTCTGATTTGTTTTTCACCTGGTCAGGTGGAAACTTGGCTGTCACCTTGGACTaGTTGGAGATGCAGGGGCTA | + |
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Preference number: 3 (lower is better) Translates to: LSSSYPSDLFFTWSGGNLAVTLD*LEMQGL Trigger: TAGCCCCTGCATCTCCAACAAGTCCAAGGTGACAGC...CAAGTTTCCACCTGACCAGGTGAAAAACAAATCAGAAGGGTAAGATGATGACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| 3UTR-3UTR CAA 90 bp | CTGTCATCATCTTACCCTTCTGATTTGTTTTTCACCTGGTCAGGTGGAAACTTGGTCACCTTGGACTTGTaGGAGATGCAGGGGCTAGAA | + |
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Preference number: 3 (lower is better) Translates to: LSSSYPSDLFFTWSGGNLVTLDL*EMQGLE Trigger: TTCTAGCCCCTGCATCTCCAACAAGTCCAAGGTGAC...CAAGTTTCCACCTGACCAGGTGAAAAACAAATCAGAAGGGTAAGATGATGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| 3UTR CCA 72 bp | CTGTCATCATCTTACCCTTCTGATTTGTTTTTCACCTaGTCAGGTGGAAACTTGGGTGGAGAGAAGGATAAG | + |
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Preference number: 3 (lower is better) Translates to: LSSSYPSDLFFT*SGGNLGGEKDK Trigger: CTTATCCTTCTCTCCACCCAAGTTTCCACCTGACCAGGTGAAAAACAAATCAGAAGGGTAAGATGATGACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| 3UTR CCA 72 bp | CTTCTGATTTGTTTTTCACCTGGTCAGGTGGAAACTTaGGTGGAGAGAAGGATAAGCCATTTATTAACCCCA | + |
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Preference number: 3 (lower is better) Translates to: LLICFSPGQVET*VERRISHLLTP Trigger: TGGGGTTAATAAATGGCTTATCCTTCTCTCCACCCAAGTTTCCACCTGACCAGGTGAAAAACAAATCAGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| CDS-3UTR CCA 90 bp | CCCTTCGACCCCGTGTCCCATAGGTGGTGGCCCCCAGACACACCCTCTCTGCTGCGAGTCCCGGGTGCTTaGCAGCCACGGCGTCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: PFDPVSHRWWPPDTPSLLRVPGA*QPRRRP Trigger: TGGACGACGCCGTGGCTGCCAAGCACCCGGGACTCG...CAGCAGAGAGGGTGTGTCTGGGGGCCACCACCTATGGGACACGGGGTCGAAGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| CDS-3UTR CCA 90 bp | CCCTTCGACCCCGTGTCCCATAGGTGGTGGCCCCCAGACACACCCTCTCTGCTGATGAAGGCGTGTGACTaGCATGCGGCATACTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: PFDPVSHRWWPPDTPSLLMKACD*HAAYSP Trigger: CGGGGAGTATGCCGCATGCCAGTCACACGCCTTCAT...CAGCAGAGAGGGTGTGTCTGGGGGCCACCACCTATGGGACACGGGGTCGAAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| CDS-3UTR CCA 90 bp | GAACATGCATCCCAATACCCTAGAGGAGAAACACCACCCCAGGGAGAGCCCTTTGGGTACCCTAGGGTGTaGGGAGGGTCGGCCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: EHASQYPRGETPPQGEPFGYPRV*GGSAWG Trigger: ACCCCAGGCCGACCCTCCCCACACCCTAGGGTACCC...AAAGGGCTCTCCCTGGGGTGGTGTTTCTCCTCTAGGGTATTGGGATGCATGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| CDS-3UTR CCA 90 bp | GAACATGCATCCCAATACCCTAGAGGAGAAACACCACCCCAGGGAGAGCCCTTTCCCGTGTCCCATAGGTaGTGGCCCCCAGACACACCC | + |
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Preference number: 4 (lower is better) Translates to: EHASQYPRGETPPQGEPFPVSHR*WPPDTP Trigger: GGGTGTGTCTGGGGGCCACCACCTATGGGACACGGG...AAAGGGCTCTCCCTGGGGTGGTGTTTCTCCTCTAGGGTATTGGGATGCATGTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| CDS-3UTR TCA 90 bp | GAACATGCATCCCAATACCCTAGAGGAGAAACACCACCCCAGGGAGAGCCCTTTTCGTCACCCCGTAGCTaGCCACAGAGCCTGCAACCA | + |
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Preference number: 4 (lower is better) Translates to: EHASQYPRGETPPQGEPFSSPRS*PQSLQP Trigger: TGGTTGCAGGCTCTGTGGTCAGCTACGGGGTGACGA...AAAGGGCTCTCCCTGGGGTGGTGTTTCTCCTCTAGGGTATTGGGATGCATGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| CDS-3UTR CCA 90 bp | CCCTTCGACCCCGTGTCCCATAGGTGGTGGCCCCCAGACACACCCTCTCTGCTGGATTTGTTTTTCACCTaGTCAGGTGGAAACTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: PFDPVSHRWWPPDTPSLLDLFFT*SGGNLG Trigger: ACCCAAGTTTCCACCTGACCAGGTGAAAAACAAATC...CAGCAGAGAGGGTGTGTCTGGGGGCCACCACCTATGGGACACGGGGTCGAAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| CDS-3UTR GCA 90 bp | CTGTCATCATCTTACCCTTCTGATTTGTTTTTCACCTGGTCAGGTGGAAACTTGTCCCCGAGTCCCGGGTaGTTGGCAGCCACGGCGTCG | + |
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Preference number: 4 (lower is better) Translates to: LSSSYPSDLFFTWSGGNLSPSPG*LAATAS Trigger: CGACGCCGTGGCTGCCAAGCACCCGGGACTCGGGGA...CAAGTTTCCACCTGACCAGGTGAAAAACAAATCAGAAGGGTAAGATGATGACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| CDS-3UTR CCA 90 bp | GACCTGTCATCATCTTACCCTTCTGATTTGTTTTTCACCTGGTCAGGTGGAAACGACCCAAGTTCACCATaGTTGGCAGGGCTCGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: DLSSSYPSDLFFTWSGGNDPSSP*LAGLGE Trigger: CTCCCCGAGCCCTGCCAACCATGGTGAACTTGGGTC...GTTTCCACCTGACCAGGTGAAAAACAAATCAGAAGGGTAAGATGATGACAGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| CDS-3UTR CCA 90 bp | GACCTGTCATCATCTTACCCTTCTGATTTGTTTTTCACCTGGTCAGGTGGAAACCTGTGCTCCTGTCTTTaGGGAGCTGCCCGGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: DLSSSYPSDLFFTWSGGNLCSCL*GAARSP Trigger: TGGAGACCGGGCAGCTCCCCAAAGACAGGAGCACAG...GTTTCCACCTGACCAGGTGAAAAACAAATCAGAAGGGTAAGATGATGACAGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| CDS-3UTR TCA 90 bp | CTGTCATCATCTTACCCTTCTGATTTGTTTTTCACCTGGTCAGGTGGAAACTTGTGGGGTCAGGGGGCATaGAGGCTGTGTTCCAGACTC | + |
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Preference number: 4 (lower is better) Translates to: LSSSYPSDLFFTWSGGNLWGQGA*RLCSRL Trigger: GAGTCTGGAACACAGCCTTCATGCCCCCTGACCCCA...CAAGTTTCCACCTGACCAGGTGAAAAACAAATCAGAAGGGTAAGATGATGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| CDS-3UTR GCA 90 bp | CTGTCATCATCTTACCCTTCTGATTTGTTTTTCACCTGGTCAGGTGGAAACTTGGGGGCAGCAGCCATCTaGAGGTGTTTGTCAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LSSSYPSDLFFTWSGGNLGAAAI*RCLSGL Trigger: CAGGCCTGACAAACACCTGCAGATGGCTGCTGCCCC...CAAGTTTCCACCTGACCAGGTGAAAAACAAATCAGAAGGGTAAGATGATGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| CDS-3UTR CCA 90 bp | CTGTCATCATCTTACCCTTCTGATTTGTTTTTCACCTGGTCAGGTGGAAACTTGGTGTCCCATAGGTGGTaGCCCCCAGACACACCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LSSSYPSDLFFTWSGGNLVSHRW*PPDTPS Trigger: AGAGGGTGTGTCTGGGGGCCACCACCTATGGGACAC...CAAGTTTCCACCTGACCAGGTGAAAAACAAATCAGAAGGGTAAGATGATGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| CDS-3UTR TCA 90 bp | GACCTGTCATCATCTTACCCTTCTGATTTGTTTTTCACCTGGTCAGGTGGAAACCTTCATGAAGGCGTGTaGCTGGCATGCGGCATACTC | + |
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Preference number: 4 (lower is better) Translates to: DLSSSYPSDLFFTWSGGNLHEGV*LACGIL Trigger: GAGTATGCCGCATGCCAGTCACACGCCTTCATGAAG...GTTTCCACCTGACCAGGTGAAAAACAAATCAGAAGGGTAAGATGATGACAGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| CDS-3UTR GCA 90 bp | GACCTGTCATCATCTTACCCTTCTGATTTGTTTTTCACCTGGTCAGGTGGAAACCCTCTCTGCTGGCAGTaGAGAACATGCATCCCAATA | + |
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Preference number: 4 (lower is better) Translates to: DLSSSYPSDLFFTWSGGNPLCWQ*RTCIPI Trigger: TATTGGGATGCATGTTCTGCACTGCCAGCAGAGAGG...GTTTCCACCTGACCAGGTGAAAAACAAATCAGAAGGGTAAGATGATGACAGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| CDS-3UTR CCA 90 bp | CTGTCATCATCTTACCCTTCTGATTTGTTTTTCACCTGGTCAGGTGGAAACTTGGGTCAGGTGGAAACTTaGGTGGAGAGAAGGATAAGC | + |
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Preference number: 4 (lower is better) Translates to: LSSSYPSDLFFTWSGGNLGQVET*VERRIS Trigger: GCTTATCCTTCTCTCCACCCAAGTTTCCACCTGACC...CAAGTTTCCACCTGACCAGGTGAAAAACAAATCAGAAGGGTAAGATGATGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| 3UTR CAA 72 bp | CCTTCTGATTTGTTTTTCACCTGGTCAGGTGGAAACTaGGGTGGAGAGAAGGATAAGCCATTTATTAACCCC | + |
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Preference number: 4 (lower is better) Translates to: PSDLFFTWSGGN*GGEKDKPFINP Trigger: GGGGTTAATAAATGGCTTATCCTTCTCTCCACCCAAGTTTCCACCTGACCAGGTGAAAAACAAATCAGAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| CDS-3UTR TCA 90 bp | GACCTGTCATCATCTTACCCTTCTGATTTGTTTTTCACCTGGTCAGGTGGAAACATCATCTTACCCTTCTaGTTTGTTTTTCACCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: DLSSSYPSDLFFTWSGGNIILPF*FVFHLV Trigger: GACCAGGTGAAAAACAAATCAGAAGGGTAAGATGAT...GTTTCCACCTGACCAGGTGAAAAACAAATCAGAAGGGTAAGATGATGACAGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| CDS CCA 90 bp | CCGGGCACAGGCTACTTCCTGACAGACGTGGTGGGTGGGCTCAGGTaGGGCTCCCGCCGAGACCTGGGGCTCCATGTCAGAGTCAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: PGTGYFLTDVVGGLR*GSRRDLGLHVRVRD Trigger: GTCCCTGACTCTGACATGGAGCCCCAGGTCTCGGCGGGAGCCCCACCTGAGCCCACCCACCACGTCTGTCAGGAAGTAGCCTGTGCCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489739.1 |
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| CDS CCA 90 bp | AACCCTAGCAGAAACCCACCCCTCAAAGAGCCCAGGCAGGGGCCCTaGAGTACCCACCCACGGCCACTAGGAGGCTCCACTGCAAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: NPSRNPPLKEPRQGP*STHPRPLGGSTAKG Trigger: ACCCTTTGCAGTGGAGCCTCCTAGTGGCCGTGGGTGGGTACTCCAGGGCCCCTGCCTGGGCTCTTTGAGGGGTGGGTTTCTGCTAGGGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489739.1 |
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| CDS CCA 90 bp | CTGACCACAGAGCCTGCAACTGTGGAGCAGGAAATGGAAGAGGGCTaGGGCCTCTGTGCTTCCCAGGCTAAGAGAACCGGGCACAGGCTA | + |
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Preference number: 5 (lower is better) Translates to: LTTEPATVEQEMEEG*GLCASQAKRTGHRL Trigger: TAGCCTGTGCCCGGTTCTCTTAGCCTGGGAAGCACAGAGGCCCCAGCCCTCTTCCATTTCCTGCTCCACAGTTGCAGGCTCTGTGGTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489739.1 |
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| CDS-3UTR CAA 90 bp | GACCTGTCATCATCTTACCCTTCTGATTTGTTTTTCACCTGGTCAGGTGGAAACCCGAGTCCCGGGTGCTaGGCAGCCACGGCGTCGTCC | + |
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Preference number: 5 (lower is better) Translates to: DLSSSYPSDLFFTWSGGNPSPGC*AATASS Trigger: GGACGACGCCGTGGCTGCCAAGCACCCGGGACTCGG...GTTTCCACCTGACCAGGTGAAAAACAAATCAGAAGGGTAAGATGATGACAGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| CDS-3UTR CAA 90 bp | GACCTGTCATCATCTTACCCTTCTGATTTGTTTTTCACCTGGTCAGGTGGAAACGCTGTCACCTTGGACTaGTTGGAGATGCAGGGGCTA | + |
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Preference number: 5 (lower is better) Translates to: DLSSSYPSDLFFTWSGGNAVTLD*LEMQGL Trigger: TAGCCCCTGCATCTCCAACAAGTCCAAGGTGACAGC...GTTTCCACCTGACCAGGTGAAAAACAAATCAGAAGGGTAAGATGATGACAGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| CDS-3UTR CAA 90 bp | GACCTGTCATCATCTTACCCTTCTGATTTGTTTTTCACCTGGTCAGGTGGAAACGTCACCTTGGACTTGTaGGAGATGCAGGGGCTAGAA | + |
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Preference number: 5 (lower is better) Translates to: DLSSSYPSDLFFTWSGGNVTLDL*EMQGLE Trigger: TTCTAGCCCCTGCATCTCCAACAAGTCCAAGGTGAC...GTTTCCACCTGACCAGGTGAAAAACAAATCAGAAGGGTAAGATGATGACAGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| CDS-3UTR CAA 90 bp | GACCTGTCATCATCTTACCCTTCTGATTTGTTTTTCACCTGGTCAGGTGGAAACTGGTCAGGTGGAAACTaGGGTGGAGAGAAGGATAAG | + |
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Preference number: 5 (lower is better) Translates to: DLSSSYPSDLFFTWSGGNWSGGN*GGEKDK Trigger: CTTATCCTTCTCTCCACCCAAGTTTCCACCTGACCA...GTTTCCACCTGACCAGGTGAAAAACAAATCAGAAGGGTAAGATGATGACAGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000290079.9 |
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| CDS CCA 72 bp | GCGGGAGGGTGCGTTCTCTCCCAGCCGCAGGACACCTaGACGCAGCCTACCGGGTGCTTGGCAGCCACGGCG | + |
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Preference number: 6 (lower is better) Translates to: AGGCVLSQPQDT*TQPTGCLAATA Trigger: CGCCGTGGCTGCCAAGCACCCGGTAGGCTGCGTCCAGGTGTCCTGCGGCTGGGAGAGAACGCACCCTCCCGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479737.1 |
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| CDS GCA 72 bp | AGACCCTGGGCGCTTGGACACGTCCCACCTCCCCTATaGCCACCCGGACGCCCTGAGCCCCTTAGCAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: RPWALGHVPPPL*PPGRPEPLSKR Trigger: TCTCTTGCTAAGGGGCTCAGGGCGTCCGGGTGGGCATAGGGGAGGTGGGACGTGTCCAAGCGCCCAGGGTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484854.1 |
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| CDS CCA 72 bp | GGCTACTTCCTGACAGACGTGGTGGGTGGGCTCAGGTaGGGCTCCCGCCGAGACCTGGGGCTCCATGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: GYFLTDVVGGLR*GSRRDLGLHVR Trigger: TCTGACATGGAGCCCCAGGTCTCGGCGGGAGCCCCACCTGAGCCCACCCACCACGTCTGTCAGGAAGTAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489739.1 |
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| CDS CCA 72 bp | AGAAACCCACCCCTCAAAGAGCCCAGGCAGGGGCCCTaGAGTACCCACCCACGGCCACTAGGAGGCTCCACT | + |
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Preference number: 6 (lower is better) Translates to: RNPPLKEPRQGP*STHPRPLGGST Trigger: AGTGGAGCCTCCTAGTGGCCGTGGGTGGGTACTCCAGGGCCCCTGCCTGGGCTCTTTGAGGGGTGGGTTTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489739.1 |
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| CDS TCA 72 bp | TGCATTTCTCCGACTCCACTCTCGTCACCCCGTAGCTaGCCACAGAGCCTGCAACCACGGCCACTAGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: CISPTPLSSPRS*PQSLQPRPLGG Trigger: GCCTCCTAGTGGCCGTGGTTGCAGGCTCTGTGGTCAGCTACGGGGTGACGAGAGTGGAGTCGGAGAAATGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000290079.9 ENST00000465017.5 ENST00000479737.1 ENST00000483187.5 ENST00000484854.1 |
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| CDS TCA 72 bp | TGCATTTCTCCGACTCCACTCTCGTCACCCCGTAGCTaGCCACAGAGCCTGCAACTGTGGAGCAGGAAATGG | + |
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Preference number: 6 (lower is better) Translates to: CISPTPLSSPRS*PQSLQLWSRKW Trigger: CCATTTCCTGCTCCACAGTTGCAGGCTCTGTGGTCAGCTACGGGGTGACGAGAGTGGAGTCGGAGAAATGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489739.1 |
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