RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM139 (Homo sapiens)

Ensembl gene IDs: ENSG00000178826

Ensembl transcript IDs: ENST00000359333.8, ENST00000409102.5, ENST00000409244.5, ENST00000409541.5, ENST00000410004.1, ENST00000471161.1, ENST00000480421.5, ENST00000482420.1, ENST00000487419.1

Found 506 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCGCGACAAGGCCCTGGACAGATGCCCGCGCGGGGAAGGAAGGCTaGCTTAGGAGGGGGCGTCAGCTATGGTTTAGCAGCTTCCAGCGA +
Preference number: 1 (lower is better)
Translates to: SATRPWTDARAGKEG*LRRGRQLWFSSFQR
Trigger: TCGCTGGAAGCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGTCCAGGGCCTTGTCGCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR CCA 90 bp GCCCGCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATaGTTTAGCAGCTTCCAGCGACCGAAACCTACATCACAGCCGCAG +
Preference number: 1 (lower is better)
Translates to: ARAGKEGWLRRGRQL*FSSFQRPKPTSQPQ
Trigger: CTGCGGCTGTGATGTAGGTTTCGGTCGCTGGAAGCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR TCA 90 bp CAGACACTGCTACGCACGCGGAGCAGGGATCACCAGCGCTTTGACTaGCTTTGCTCGTCCAGGAGGCTGGGGACATGCGTGCCCATGCTC +
Preference number: 1 (lower is better)
Translates to: QTLLRTRSRDHQRFD*LCSSRRLGTCVPML
Trigger: GAGCATGGGCACGCATGTCCCCAGCCTCCTGGACGAGCAAAGTCAGTCAAAGCGCTGGTGATCCCTGCTCCGCGTGCGTAGCAGTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR TCA 90 bp GGCACAGACACTGCTACGCACGCGGAGCAGGGATCACCAGCGCTTTaGCTGACTTTGCTCGTCCAGGAGGCTGGGGACATGCGTGCCCAT +
Preference number: 1 (lower is better)
Translates to: GTDTATHAEQGSPAL*LTLLVQEAGDMRAH
Trigger: ATGGGCACGCATGTCCCCAGCCTCCTGGACGAGCAAAGTCAGTCAAAGCGCTGGTGATCCCTGCTCCGCGTGCGTAGCAGTGTCTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR CCA 90 bp GCAGGGATCACCAGCGCTTTGACTGACTTTGCTCGTCCAGGAGGCTaGGGACATGCGTGCCCATGCTCAGCCCACCCCCTCTGTAGACAC +
Preference number: 1 (lower is better)
Translates to: AGITSALTDFARPGG*GHACPCSAHPLCRH
Trigger: GTGTCTACAGAGGGGGTGGGCTGAGCATGGGCACGCATGTCCCCAGCCTCCTGGACGAGCAAAGTCAGTCAAAGCGCTGGTGATCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR CCA 90 bp TCAGATAGGATGGGGACCCTGCACTGGAGACTGCTCTCTAGCCCCTaGGCAGGAGAGGCACAGACACTGCTACGCACGCGGAGCAGGGAT +
Preference number: 1 (lower is better)
Translates to: SDRMGTLHWRLLSSP*AGEAQTLLRTRSRD
Trigger: ATCCCTGCTCCGCGTGCGTAGCAGTGTCTGTGCCTCTCCTGCCCAGGGGCTAGAGAGCAGTCTCCAGTGCAGGGTCCCCATCCTATCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR TCA 90 bp TGCTTTATTGAAGTTGAACGGTTGGGGCCAGGCTGCGAAGGAGACTaGGAGCGCGACAAGGCCCTGGACAGATGCCCGCGCGGGGAAGGA +
Preference number: 1 (lower is better)
Translates to: CFIEVERLGPGCEGD*ERDKALDRCPRGEG
Trigger: TCCTTCCCCGCGCGGGCATCTGTCCAGGGCCTTGTCGCGCTCTCAGTCTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAATAAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR GCA 90 bp TTGACTGACTTTGCTCGTCCAGGAGGCTGGGGACATGCGTGCCCATaGTCAGCCCACCCCCTCTGTAGACACAATTGGTCGCCCATTCTG +
Preference number: 1 (lower is better)
Translates to: LTDFARPGGWGHACP*SAHPLCRHNWSPIL
Trigger: CAGAATGGGCGACCAATTGTGTCTACAGAGGGGGTGGGCTGAGCATGGGCACGCATGTCCCCAGCCTCCTGGACGAGCAAAGTCAGTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR TCA 90 bp GGTGCTCAATATTGGGATCTCAGGAATCAGGACCGGCGGCTGGGGTaGAAGCCTAGCGGTCAGAGCTTAGGAGTGAGGCAGAAGCTGTTA +
Preference number: 1 (lower is better)
Translates to: GAQYWDLRNQDRRLG*KPSGQSLGVRQKLL
Trigger: TAACAGCTTCTGCCTCACTCCTAAGCTCTGACCGCTAGGCTTTCACCCCAGCCGCCGGTCCTGATTCCTGAGATCCCAATATTGAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR GCA 90 bp CGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTaGTCAATATTGGGATCTCAGGAATCAGGACCGGCGGCTGGGGTG +
Preference number: 1 (lower is better)
Translates to: RNLHHSRSTQFQETW*SILGSQESGPAAGV
Trigger: CACCCCAGCCGCCGGTCCTGATTCCTGAGATCCCAATATTGAGCACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR CCA 90 bp GGACATGCGTGCCCATGCTCAGCCCACCCCCTCTGTAGACACAATTaGTCGCCCATTCTGTTTATAGGAAGTCTTCCATCCTGCACCAGC +
Preference number: 1 (lower is better)
Translates to: GHACPCSAHPLCRHN*SPILFIGSLPSCTS
Trigger: GCTGGTGCAGGATGGAAGACTTCCTATAAACAGAATGGGCGACCAATTGTGTCTACAGAGGGGGTGGGCTGAGCATGGGCACGCATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR CCA 90 bp GACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTaGTGCTCAATATTGGGATCTCAGGAATCAGGACCGGCGGCTGGG +
Preference number: 1 (lower is better)
Translates to: DRNLHHSRSTQFQET*CSILGSQESGPAAG
Trigger: CCCAGCCGCCGGTCCTGATTCCTGAGATCCCAATATTGAGCACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR CCA 90 bp CACAAAGCTGTCAAGCCTAAGGGTTCTAACAGCTCGAACAGCACCTaGAACAGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTC +
Preference number: 1 (lower is better)
Translates to: HKAVKPKGSNSSNST*NRSNSRHSEVTSSF
Trigger: GAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCTTAGGCTTGACAGCTTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR CCA 90 bp AAGAGGGAGTCTCCTCGCCAGAAAGTTCACATGTTTCACTCCTTCTaGCCTTCATACCAACCCATTGTTAAAACTGGAAGTCCCTCCACC +
Preference number: 1 (lower is better)
Translates to: KRESPRQKVHMFHSF*PSYQPIVKTGSPST
Trigger: GGTGGAGGGACTTCCAGTTTTAACAATGGGTTGGTATGAAGGCCAGAAGGAGTGAAACATGTGAACTTTCTGGCGAGGAGACTCCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR CCA 90 bp ACTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTaGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCT +
Preference number: 1 (lower is better)
Translates to: TSSVPSCTLSNSSDS*NPHFSIITHKAVKP
Trigger: AGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR GCA 90 bp TTCATTCCAGTTATTTTAATGTTATTTACTAGCAGTGTGCCCTCGTaGACATTATCAAACTCCTCTGACTCTTGGAATCCTCATTTTTCA +
Preference number: 1 (lower is better)
Translates to: FIPVILMLFTSSVPS*TLSNSSDSWNPHFS
Trigger: TGAAAAATGAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGTAAATAACATTAAAATAACTGGAATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp AGGCCCTGGACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTATCAGGACCGGCGGCTaGGGTGAAAGCCTAGCGGTC +
Preference number: 2 (lower is better)
Translates to: RPWTDARAGKEGWLRRGRIRTGG*GESLAV
Trigger: GACCGCTAGGCTTTCACCCCAGCCGCCGGTCCTGAT...ACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGTCCAGGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR GCA 90 bp AGCGCGACAAGGCCCTGGACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGCCCTGCACTGGAGACTaGTCTCTAGCCCCTGGGCAG +
Preference number: 2 (lower is better)
Translates to: SATRPWTDARAGKEGWLRPCTGD*SLAPGQ
Trigger: CTGCCCAGGGGCTAGAGAGCAGTCTCCAGTGCAGGG...CCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGTCCAGGGCCTTGTCGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp AGGCCCTGGACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCTGCTCTCTAGCCCCTaGGCAGGAGAGGCACAGACA +
Preference number: 2 (lower is better)
Translates to: RPWTDARAGKEGWLRRGRLLSSP*AGEAQT
Trigger: TGTCTGTGCCTCTCCTGCCCAGGGGCTAGAGAGCAG...ACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGTCCAGGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp ACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGGGGAAGGGCTTACCGTaGCCTGACTCTCCTCAGGGT +
Preference number: 2 (lower is better)
Translates to: TDARAGKEGWLRRGRQLWGKGLP*PDSPQG
Trigger: ACCCTGAGGAGAGTCAGGCCACGGTAAGCCCTTCCC...CCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp AGCGCGACAAGGCCCTGGACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATaGTTTAGCAGCTTCCAGCGA +
Preference number: 2 (lower is better)
Translates to: SATRPWTDARAGKEGWLRRGRQL*FSSFQR
Trigger: TCGCTGGAAGCTGCTAAACCATAGCTGACGCCCCCT...CCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGTCCAGGGCCTTGTCGCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR CAA 90 bp AGGCACAGACACTGCTACGCACGCGGAGCAGGGATCACCAGCGCTTaGACTGACTTTGCTCGTCCAGGAGGCTGGGGACATGCGTGCCCA +
Preference number: 2 (lower is better)
Translates to: RHRHCYARGAGITSA*TDFARPGGWGHACP
Trigger: TGGGCACGCATGTCCCCAGCCTCCTGGACGAGCAAAGTCAGTCAAAGCGCTGGTGATCCCTGCTCCGCGTGCGTAGCAGTGTCTGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp AGCGCGACAAGGCCCTGGACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGAGCTCGAACAGCACCTaGAACAGAAGCAATAGCCGC +
Preference number: 2 (lower is better)
Translates to: SATRPWTDARAGKEGWLRSSNST*NRSNSR
Trigger: GCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCT...CCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGTCCAGGGCCTTGTCGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp GGGATCTCAGGAATCAGGACCGGCGGCTGGGGTGAAAGCCTAGCGGTCAGAGCTCTGCTCTCTAGCCCCTaGGCAGGAGAGGCACAGACA +
Preference number: 2 (lower is better)
Translates to: GISGIRTGGWGESLAVRALLSSP*AGEAQT
Trigger: TGTCTGTGCCTCTCCTGCCCAGGGGCTAGAGAGCAG...AGCTCTGACCGCTAGGCTTTCACCCCAGCCGCCGGTCCTGATTCCTGAGATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR TCA 90 bp GGGATCTCAGGAATCAGGACCGGCGGCTGGGGTGAAAGCCTAGCGGTCAGAGCTCACCAGCGCTTTGACTaGCTTTGCTCGTCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: GISGIRTGGWGESLAVRAHQRFD*LCSSRR
Trigger: CCTCCTGGACGAGCAAAGTCAGTCAAAGCGCTGGTG...AGCTCTGACCGCTAGGCTTTCACCCCAGCCGCCGGTCCTGATTCCTGAGATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR TCA 90 bp CGTCAGCTATGGTTTAGCAGCTTCCAGCGACCGAAACCTACATCACAGCCGCAGGACCGGCGGCTGGGGTaGAAGCCTAGCGGTCAGAGC +
Preference number: 2 (lower is better)
Translates to: RQLWFSSFQRPKPTSQPQDRRLG*KPSGQS
Trigger: GCTCTGACCGCTAGGCTTTCACCCCAGCCGCCGGTC...CTGCGGCTGTGATGTAGGTTTCGGTCGCTGGAAGCTGCTAAACCATAGCTGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR TCA 90 bp CGACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTGCTCGACCGGCGGCTGGGGTaGAAGCCTAGCGGTCAGAGC +
Preference number: 2 (lower is better)
Translates to: RPKPTSQPQHTIPGNLVLDRRLG*KPSGQS
Trigger: GCTCTGACCGCTAGGCTTTCACCCCAGCCGCCGGTC...GAGCACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR TCA 90 bp ACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTCCACCTGGGGTCACTaGCTCCACTGTTTTCAGATA +
Preference number: 2 (lower is better)
Translates to: TDARAGKEGWLRRGRQLWSTWGH*LHCFQI
Trigger: TATCTGAAAACAGTGGAGTCAGTGACCCCAGGTGGA...CCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp CCAGCGACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTGCTCGTCCAGGAGGCTaGGGACATGCGTGCCCATGC +
Preference number: 2 (lower is better)
Translates to: PATETYITAAAHNSRKPGARPGG*GHACPC
Trigger: GCATGGGCACGCATGTCCCCAGCCTCCTGGACGAGC...ACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTCGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR TCA 90 bp TGGAAGTCCCTCCACCTGGGGTCACTGACTCCACTGTTTTCAGATAGGATGGGGGGGCTTACCGTGGCCTaGCTCTCCTCAGGGTCCAAG +
Preference number: 2 (lower is better)
Translates to: WKSLHLGSLTPLFSDRMGGLTVA*LSSGSK
Trigger: CTTGGACCCTGAGGAGAGTCAGGCCACGGTAAGCCC...CCCCATCCTATCTGAAAACAGTGGAGTCAGTGACCCCAGGTGGAGGGACTTCCA
59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR TCA 90 bp AAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAGCAGCTTCCAGCGACCGACACCAGCGCTTTGACTaGCTTTGCTCGTCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: KAGLGGGVSYGLAASSDRHQRFD*LCSSRR
Trigger: CCTCCTGGACGAGCAAAGTCAGTCAAAGCGCTGGTG...TCGGTCGCTGGAAGCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR GCA 90 bp CGTCAGCTATGGTTTAGCAGCTTCCAGCGACCGAAACCTACATCACAGCCGCAGGGACATGCGTGCCCATaGTCAGCCCACCCCCTCTGT +
Preference number: 2 (lower is better)
Translates to: RQLWFSSFQRPKPTSQPQGHACP*SAHPLC
Trigger: ACAGAGGGGGTGGGCTGAGCATGGGCACGCATGTCC...CTGCGGCTGTGATGTAGGTTTCGGTCGCTGGAAGCTGCTAAACCATAGCTGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR GCA 90 bp TGGAAGTCCCTCCACCTGGGGTCACTGACTCCACTGTTTTCAGATAGGATGGGGGAGAGGCACAGACACTaGTACGCACGCGGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: WKSLHLGSLTPLFSDRMGERHRH*YARGAG
Trigger: CCCTGCTCCGCGTGCGTAGCAGTGTCTGTGCCTCTC...CCCCATCCTATCTGAAAACAGTGGAGTCAGTGACCCCAGGTGGAGGGACTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR GCA 90 bp GGGATCTCAGGAATCAGGACCGGCGGCTGGGGTGAAAGCCTAGCGGTCAGAGCTATAGGATGGGGACCCTaGACTGGAGACTGCTCTCTA +
Preference number: 2 (lower is better)
Translates to: GISGIRTGGWGESLAVRAIGWGP*TGDCSL
Trigger: TAGAGAGCAGTCTCCAGTGCAGGGTCCCCATCCTAT...AGCTCTGACCGCTAGGCTTTCACCCCAGCCGCCGGTCCTGATTCCTGAGATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR GCA 90 bp GCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAGCAGCTATAGGATGGGGACCCTaGACTGGAGACTGCTCTCTA +
Preference number: 2 (lower is better)
Translates to: ARGRKAGLGGGVSYGLAAIGWGP*TGDCSL
Trigger: TAGAGAGCAGTCTCCAGTGCAGGGTCCCCATCCTAT...AGCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR GCA 90 bp GGGGCCAGGCTGCGAAGGAGACTGAGAGCGCGACAAGGCCCTGGACAGATGCCCTTCCAGGAAACCTGGTaGTCAATATTGGGATCTCAG +
Preference number: 2 (lower is better)
Translates to: GARLRRRLRARQGPGQMPFQETW*SILGSQ
Trigger: CTGAGATCCCAATATTGAGCACCAGGTTTCCTGGAA...GGGCATCTGTCCAGGGCCTTGTCGCGCTCTCAGTCTCCTTCGCAGCCTGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp GGGATCTCAGGAATCAGGACCGGCGGCTGGGGTGAAAGCCTAGCGGTCAGAGCTAGCTCGAACAGCACCTaGAACAGAAGCAATAGCCGC +
Preference number: 2 (lower is better)
Translates to: GISGIRTGGWGESLAVRASSNST*NRSNSR
Trigger: GCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCT...AGCTCTGACCGCTAGGCTTTCACCCCAGCCGCCGGTCCTGATTCCTGAGATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR TCA 90 bp AGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGCCGCCACTCAGGGGCTTACCGTGGCCTaGCTCTCCTCAGGGTCCAAG +
Preference number: 2 (lower is better)
Translates to: RVLTARTAPGTEAIAATQGLTVA*LSSGSK
Trigger: CTTGGACCCTGAGGAGAGTCAGGCCACGGTAAGCCC...CTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR TCA 90 bp GCTTTATTGAAGTTGAACGGTTGGGGCCAGGCTGCGAAGGAGACTGAGAGCGCGCACCAGCGCTTTGACTaGCTTTGCTCGTCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: ALLKLNGWGQAAKETESAHQRFD*LCSSRR
Trigger: CCTCCTGGACGAGCAAAGTCAGTCAAAGCGCTGGTG...CGCGCTCTCAGTCTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAATAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR TCA 90 bp GCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAGCAGCTCCAAGTCCCCATTTATaGTGTCCAGGCAGAAACACT +
Preference number: 2 (lower is better)
Translates to: ARGRKAGLGGGVSYGLAAPSPHL*CPGRNT
Trigger: AGTGTTTCTGCCTGGACATCATAAATGGGGACTTGG...AGCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp GGGATCTCAGGAATCAGGACCGGCGGCTGGGGTGAAAGCCTAGCGGTCAGAGCTTCCCTAGACAGGGATTaGGAGACATGCAAGTTGCTT +
Preference number: 2 (lower is better)
Translates to: GISGIRTGGWGESLAVRASLDRD*ETCKLL
Trigger: AAGCAACTTGCATGTCTCCCAATCCCTGTCTAGGGA...AGCTCTGACCGCTAGGCTTTCACCCCAGCCGCCGGTCCTGATTCCTGAGATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp AAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAGCAGCTTCCAGCGACCGACCCCGGGGCTACATATaGATGATTCAAGAGGGAGTC +
Preference number: 2 (lower is better)
Translates to: KAGLGGGVSYGLAASSDRPRGYI*MIQEGV
Trigger: GACTCCCTCTTGAATCATCCATATGTAGCCCCGGGG...TCGGTCGCTGGAAGCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp ACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGAAACACAATAGGCTTTaGGATCAGGAGTTCATTCCA +
Preference number: 2 (lower is better)
Translates to: TDARAGKEGWLRRGRQLWKHNRL*DQEFIP
Trigger: TGGAATGAACTCCTGATCCCAAAGCCTATTGTGTTT...CCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp AAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAGCAGCTTCCAGCGACCGATGTTTTCAGATAGGATaGGGACCCTGCACTGGAGAC +
Preference number: 2 (lower is better)
Translates to: KAGLGGGVSYGLAASSDRCFQIG*GPCTGD
Trigger: GTCTCCAGTGCAGGGTCCCCATCCTATCTGAAAACA...TCGGTCGCTGGAAGCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR TCA 90 bp GACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTGCTCAGGATCACCAGCGCTTTaGCTGACTTTGCTCGTCCAG +
Preference number: 2 (lower is better)
Translates to: DRNLHHSRSTQFQETWCSGSPAL*LTLLVQ
Trigger: CTGGACGAGCAAAGTCAGTCAAAGCGCTGGTGATCC...TGAGCACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp TGGAACAGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCCACCCATATCTCAGCTaGGAAGGGCTTACCGTGGCC +
Preference number: 2 (lower is better)
Translates to: WNRSNSRHSEVTSSFSAFHPYLS*EGLTVA
Trigger: GGCCACGGTAAGCCCTTCCCAGCTGAGATATGGGTG...GAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCTGTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp GGCCTTCATACCAACCCATTGTTAAAACTGGAAGTCCCTCCACCTGGGGTCACTCACCCATATCTCAGCTaGGAAGGGCTTACCGTGGCC +
Preference number: 2 (lower is better)
Translates to: GLHTNPLLKLEVPPPGVTHPYLS*EGLTVA
Trigger: GGCCACGGTAAGCCCTTCCCAGCTGAGATATGGGTG...AGTGACCCCAGGTGGAGGGACTTCCAGTTTTAACAATGGGTTGGTATGAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp AAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAGCAGCTTCCAGCGACCGATCCCTAGACAGGGATTaGGAGACATGCAAGTTGCTT +
Preference number: 2 (lower is better)
Translates to: KAGLGGGVSYGLAASSDRSLDRD*ETCKLL
Trigger: AAGCAACTTGCATGTCTCCCAATCCCTGTCTAGGGA...TCGGTCGCTGGAAGCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp CGTCAGCTATGGTTTAGCAGCTTCCAGCGACCGAAACCTACATCACAGCCGCAGCCCCGGGGCTACATATaGATGATTCAAGAGGGAGTC +
Preference number: 2 (lower is better)
Translates to: RQLWFSSFQRPKPTSQPQPRGYI*MIQEGV
Trigger: GACTCCCTCTTGAATCATCCATATGTAGCCCCGGGG...CTGCGGCTGTGATGTAGGTTTCGGTCGCTGGAAGCTGCTAAACCATAGCTGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR GCA 90 bp GACTCTTCGCAAGTGACCCCGGGGCTACATATGGATGATTCAAGAGGGAGTCTCATAGGATGGGGACCCTaGACTGGAGACTGCTCTCTA +
Preference number: 2 (lower is better)
Translates to: DSSQVTPGLHMDDSRGSLIGWGP*TGDCSL
Trigger: TAGAGAGCAGTCTCCAGTGCAGGGTCCCCATCCTAT...GAGACTCCCTCTTGAATCATCCATATGTAGCCCCGGGGTCACTTGCGAAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp ACAAAGCTGTCAAGCCTAAGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGGGAAGGGCTTACCGTaGCCTGACTCTCCTCAGGGT +
Preference number: 2 (lower is better)
Translates to: TKLSSLRVLTARTAPGTEGKGLP*PDSPQG
Trigger: ACCCTGAGGAGAGTCAGGCCACGGTAAGCCCTTCCC...TTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCTTAGGCTTGACAGCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp GCTGTCAAGCCTAAGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATCACCCATATCTCAGCTaGGAAGGGCTTACCGTGGCC +
Preference number: 2 (lower is better)
Translates to: AVKPKGSNSSNSTWNRSNHPYLS*EGLTVA
Trigger: GGCCACGGTAAGCCCTTCCCAGCTGAGATATGGGTG...ATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCTTAGGCTTGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp GGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGCCGCCACTCAGAGCTTCTCCGCCTTCTCTaGATCACCTCCCTACCTCAT +
Preference number: 2 (lower is better)
Translates to: GSNSSNSTWNRSNSRHSELLRLL*ITSLPH
Trigger: ATGAGGTAGGGAGGTGATCCAGAGAAGGCGGAGAAG...CTCTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR TCA 90 bp GTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCATTTTTGGGCTTACCGTGGCCTaGCTCTCCTCAGGGTCCAAG +
Preference number: 2 (lower is better)
Translates to: VCPRAHYQTPLTLGILIFGLTVA*LSSGSK
Trigger: CTTGGACCCTGAGGAGAGTCAGGCCACGGTAAGCCC...AAAAATGAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp AAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAGCAGCTTCCAGCGACCGAGACATGCAAGTTGCTTaGCTTCCTATTACCTTGTGT +
Preference number: 2 (lower is better)
Translates to: KAGLGGGVSYGLAASSDRDMQVA*LPITLC
Trigger: ACACAAGGTAATAGGAAGCCAAGCAACTTGCATGTC...TCGGTCGCTGGAAGCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR TCA 90 bp AGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGCCGCCACTCAGCCAAGTCCCCATTTATaGTGTCCAGGCAGAAACACT +
Preference number: 2 (lower is better)
Translates to: RVLTARTAPGTEAIAATQPSPHL*CPGRNT
Trigger: AGTGTTTCTGCCTGGACATCATAAATGGGGACTTGG...CTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR TCA 90 bp CAATCTAACGCTGGAAATATTGGATATGGGGTAGGTCACCAAATGTTGCCAGAAGGGCTTACCGTGGCCTaGCTCTCCTCAGGGTCCAAG +
Preference number: 2 (lower is better)
Translates to: QSNAGNIGYGVGHQMLPEGLTVA*LSSGSK
Trigger: CTTGGACCCTGAGGAGAGTCAGGCCACGGTAAGCCC...TTCTGGCAACATTTGGTGACCTACCCCATATCCAATATTTCCAGCGTTAGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp TTTACTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATGGGAAGGGCTTACCGTaGCCTGACTCTCCTCAGGGT +
Preference number: 2 (lower is better)
Translates to: FTSSVPSCTLSNSSDSWNGKGLP*PDSPQG
Trigger: ACCCTGAGGAGAGTCAGGCCACGGTAAGCCCTTCCC...ATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp GGCTACATATGGATGATTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACATGTTCACCCATATCTCAGCTaGGAAGGGCTTACCGTGGCC +
Preference number: 2 (lower is better)
Translates to: GYIWMIQEGVSSPESSHVHPYLS*EGLTVA
Trigger: GGCCACGGTAAGCCCTTCCCAGCTGAGATATGGGTG...AACATGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAATCATCCATATGTAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR TCA 90 bp GACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTGCTCAAGAAACACTTGTTTCTaGCACATAGTAGGCGCTGGA +
Preference number: 2 (lower is better)
Translates to: DRNLHHSRSTQFQETWCSRNTCF*HIVGAG
Trigger: TCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCT...TGAGCACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR GCA 90 bp GCTTTATTGAAGTTGAACGGTTGGGGCCAGGCTGCGAAGGAGACTGAGAGCGCGTATTTACTAGCAGTGTaGCCTCGTGCACATTATCAA +
Preference number: 2 (lower is better)
Translates to: ALLKLNGWGQAAKETESAYLLAV*PRAHYQ
Trigger: TTGATAATGTGCACGAGGGCACACTGCTAGTAAATA...CGCGCTCTCAGTCTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAATAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp GCTTCCAGCGACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCCAAATGAACGAGGTCTaGTGTGGAGAGAAGAGAAAT +
Preference number: 2 (lower is better)
Translates to: ASSDRNLHHSRSTQFQETQMNEV*CGEKRN
Trigger: ATTTCTCTTCTCTCCACACCAGACCTCGTTCATTTG...GGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTCGCTGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR TCA 90 bp GGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGCCGCCACTCAGAGAAAATGTTAGTCAAATaGACGAGGTCTGGTGTGGAG +
Preference number: 2 (lower is better)
Translates to: GSNSSNSTWNRSNSRHSEKMLVK*TRSGVE
Trigger: CTCCACACCAGACCTCGTTCATTTGACTAACATTTT...CTCTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR GCA 90 bp TCCTTCTCCGCCTTCTCTGGATCACCTCCCTACCTCATCCTCAATCTAACGCTGAGAAGACTCAAATTATaGCACCCATATCTCAGCTGG +
Preference number: 2 (lower is better)
Translates to: SFSAFSGSPPYLILNLTLRRLKL*HPYLSW
Trigger: CCAGCTGAGATATGGGTGGCATAATTTGAGTCTTCT...CAGCGTTAGATTGAGGATGAGGTAGGGAGGTGATCCAGAGAAGGCGGAGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp CAGCAGCTGTCCCTAGACAGGGATTGGGAGACATGCAAGTTGCTTGGCTTCCTACAAATGAACGAGGTCTaGTGTGGAGAGAAGAGAAAT +
Preference number: 2 (lower is better)
Translates to: QQLSLDRDWETCKLLGFLQMNEV*CGEKRN
Trigger: ATTTCTCTTCTCTCCACACCAGACCTCGTTCATTTG...TAGGAAGCCAAGCAACTTGCATGTCTCCCAATCCCTGTCTAGGGACAGCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR CAA 90 bp CTGCACCAGCAGCTGTCCCTAGACAGGGATTGGGAGACATGCAAGTaGCTTGGCTTCCTATTACCTTGTGTTGAAAACACAATAGGCTTT +
Preference number: 2 (lower is better)
Translates to: LHQQLSLDRDWETCK*LGFLLPCVENTIGF
Trigger: AAAGCCTATTGTGTTTTCAACACAAGGTAATAGGAAGCCAAGCAACTTGCATGTCTCCCAATCCCTGTCTAGGGACAGCTGCTGGTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR TCA 90 bp AGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCTCTGGAAAAATGTTAGTCAAATaGACGAGGTCTGGTGTGGAG +
Preference number: 2 (lower is better)
Translates to: RSNSRHSEVTSSFSAFSGKMLVK*TRSGVE
Trigger: CTCCACACCAGACCTCGTTCATTTGACTAACATTTT...TCCAGAGAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR GCA 90 bp CCGGGGCTACATATGGATGATTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACAAGAAGACTCAAATTATaGCACCCATATCTCAGCTGG +
Preference number: 2 (lower is better)
Translates to: PGLHMDDSRGSLLARKFTRRLKL*HPYLSW
Trigger: CCAGCTGAGATATGGGTGGCATAATTTGAGTCTTCT...TGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAATCATCCATATGTAGCCCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp TATTTACTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGACTTCTCCGCCTTCTCTaGATCACCTCCCTACCTCAT +
Preference number: 2 (lower is better)
Translates to: YLLAVCPRAHYQTPLTLGLLRLL*ITSLPH
Trigger: ATGAGGTAGGGAGGTGATCCAGAGAAGGCGGAGAAG...TCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp GTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCATTTTTAGCTCGAACAGCACCTaGAACAGAAGCAATAGCCGC +
Preference number: 2 (lower is better)
Translates to: VCPRAHYQTPLTLGILIFSSNST*NRSNSR
Trigger: GCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCT...AAAAATGAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR TCA 90 bp CTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCAAAATGTTAGTCAAATaGACGAGGTCTGGTGTGGAG +
Preference number: 2 (lower is better)
Translates to: LAVCPRAHYQTPLTLGILKMLVK*TRSGVE
Trigger: CTCCACACCAGACCTCGTTCATTTGACTAACATTTT...GAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp CTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCCAAATGAACGAGGTCTaGTGTGGAGAGAAGAGAAAT +
Preference number: 2 (lower is better)
Translates to: LAVCPRAHYQTPLTLGILQMNEV*CGEKRN
Trigger: ATTTCTCTTCTCTCCACACCAGACCTCGTTCATTTG...GAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp CTTGGCTTCCTATTACCTTGTGTTGAAAACACAATAGGCTTTGGGATCAGGAGTCTTCTCCGCCTTCTCTaGATCACCTCCCTACCTCAT +
Preference number: 2 (lower is better)
Translates to: LGFLLPCVENTIGFGIRSLLRLL*ITSLPH
Trigger: ATGAGGTAGGGAGGTGATCCAGAGAAGGCGGAGAAG...ACTCCTGATCCCAAAGCCTATTGTGTTTTCAACACAAGGTAATAGGAAGCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR TCA 90 bp GTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCATTTTTCCAAGTCCCCATTTATaGTGTCCAGGCAGAAACACT +
Preference number: 2 (lower is better)
Translates to: VCPRAHYQTPLTLGILIFPSPHL*CPGRNT
Trigger: AGTGTTTCTGCCTGGACATCATAAATGGGGACTTGG...AAAAATGAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR GCA 90 bp ACAAAGCTGTCAAGCCTAAGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAAGAAGACTCAAATTATaGCACCCATATCTCAGCTGG +
Preference number: 2 (lower is better)
Translates to: TKLSSLRVLTARTAPGTERRLKL*HPYLSW
Trigger: CCAGCTGAGATATGGGTGGCATAATTTGAGTCTTCT...TTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCTTAGGCTTGACAGCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR TCA 90 bp TATTTACTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAAGAAACACTTGTTTCTaGCACATAGTAGGCGCTGGA +
Preference number: 2 (lower is better)
Translates to: YLLAVCPRAHYQTPLTLGRNTCF*HIVGAG
Trigger: TCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCT...TCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp TATTTACTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGACAAATGAACGAGGTCTaGTGTGGAGAGAAGAGAAAT +
Preference number: 2 (lower is better)
Translates to: YLLAVCPRAHYQTPLTLGQMNEV*CGEKRN
Trigger: ATTTCTCTTCTCTCCACACCAGACCTCGTTCATTTG...TCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp GTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCATTTTTCAAATGAACGAGGTCTaGTGTGGAGAGAAGAGAAAT +
Preference number: 2 (lower is better)
Translates to: VCPRAHYQTPLTLGILIFQMNEV*CGEKRN
Trigger: ATTTCTCTTCTCTCCACACCAGACCTCGTTCATTTG...AAAAATGAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp TCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTAAGGGTCTTCTCCGCCTTCTCTaGATCACCTCCCTACCTCAT +
Preference number: 2 (lower is better)
Translates to: SWNPHFSIITHKAVKPKGLLRLL*ITSLPH
Trigger: ATGAGGTAGGGAGGTGATCCAGAGAAGGCGGAGAAG...ACCCTTAGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CCA 90 bp GGCTACATATGGATGATTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACATGTTCTCTGTAGACACAATTaGTCGCCCATTCTGTTTATA +
Preference number: 2 (lower is better)
Translates to: GYIWMIQEGVSSPESSHVLCRHN*SPILFI
Trigger: TATAAACAGAATGGGCGACCAATTGTGTCTACAGAG...AACATGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAATCATCCATATGTAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR GCA 90 bp CTTGGCTTCCTATTACCTTGTGTTGAAAACACAATAGGCTTTGGGATCAGGAGTAGAAGACTCAAATTATaGCACCCATATCTCAGCTGG +
Preference number: 2 (lower is better)
Translates to: LGFLLPCVENTIGFGIRSRRLKL*HPYLSW
Trigger: CCAGCTGAGATATGGGTGGCATAATTTGAGTCTTCT...ACTCCTGATCCCAAAGCCTATTGTGTTTTCAACACAAGGTAATAGGAAGCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR TCA 90 bp TCTGACTCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTCCAAGTCCCCATTTATaGTGTCCAGGCAGAAACACT +
Preference number: 2 (lower is better)
Translates to: SDSWNPHFSIITHKAVKPPSPHL*CPGRNT
Trigger: AGTGTTTCTGCCTGGACATCATAAATGGGGACTTGG...AGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGAGTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR TCA 72 bp GAAGTTGAACGGTTGGGGCCAGGCTGCGAAGGAGACTaGGAGCGCGACAAGGCCCTGGACAGATGCCCGCGC +
Preference number: 3 (lower is better)
Translates to: EVERLGPGCEGD*ERDKALDRCPR
Trigger: GCGCGGGCATCTGTCCAGGGCCTTGTCGCGCTCTCAGTCTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR CCA 72 bp AGGCCCTGGACAGATGCCCGCGCGGGGAAGGAAGGCTaGCTTAGGAGGGGGCGTCAGCTATGGTTTAGCAGC +
Preference number: 3 (lower is better)
Translates to: RPWTDARAGKEG*LRRGRQLWFSS
Trigger: GCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGTCCAGGGCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR CCA 72 bp ACCAGCGCTTTGACTGACTTTGCTCGTCCAGGAGGCTaGGGACATGCGTGCCCATGCTCAGCCCACCCCCTC +
Preference number: 3 (lower is better)
Translates to: TSALTDFARPGG*GHACPCSAHPL
Trigger: GAGGGGGTGGGCTGAGCATGGGCACGCATGTCCCCAGCCTCCTGGACGAGCAAAGTCAGTCAAAGCGCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR TCA 72 bp CTACGCACGCGGAGCAGGGATCACCAGCGCTTTGACTaGCTTTGCTCGTCCAGGAGGCTGGGGACATGCGTG +
Preference number: 3 (lower is better)
Translates to: LRTRSRDHQRFD*LCSSRRLGTCV
Trigger: CACGCATGTCCCCAGCCTCCTGGACGAGCAAAGTCAGTCAAAGCGCTGGTGATCCCTGCTCCGCGTGCGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR TCA 72 bp ACTGCTACGCACGCGGAGCAGGGATCACCAGCGCTTTaGCTGACTTTGCTCGTCCAGGAGGCTGGGGACATG +
Preference number: 3 (lower is better)
Translates to: TATHAEQGSPAL*LTLLVQEAGDM
Trigger: CATGTCCCCAGCCTCCTGGACGAGCAAAGTCAGTCAAAGCGCTGGTGATCCCTGCTCCGCGTGCGTAGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR GCA 72 bp TTTGCTCGTCCAGGAGGCTGGGGACATGCGTGCCCATaGTCAGCCCACCCCCTCTGTAGACACAATTGGTCG +
Preference number: 3 (lower is better)
Translates to: FARPGGWGHACP*SAHPLCRHNWS
Trigger: CGACCAATTGTGTCTACAGAGGGGGTGGGCTGAGCATGGGCACGCATGTCCCCAGCCTCCTGGACGAGCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR TCA 72 bp TATTGGGATCTCAGGAATCAGGACCGGCGGCTGGGGTaGAAGCCTAGCGGTCAGAGCTTAGGAGTGAGGCAG +
Preference number: 3 (lower is better)
Translates to: YWDLRNQDRRLG*KPSGQSLGVRQ
Trigger: CTGCCTCACTCCTAAGCTCTGACCGCTAGGCTTTCACCCCAGCCGCCGGTCCTGATTCCTGAGATCCCAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CAA 90 bp GCTTTATTGAAGTTGAACGGTTGGGGCCAGGCTGCGAAGGAGACTGAGAGCGCGGGGATCACCAGCGCTTaGACTGACTTTGCTCGTCCA +
Preference number: 3 (lower is better)
Translates to: ALLKLNGWGQAAKETESAGITSA*TDFARP
Trigger: TGGACGAGCAAAGTCAGTCAAAGCGCTGGTGATCCC...CGCGCTCTCAGTCTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAATAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR CCA 72 bp GGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATaGTTTAGCAGCTTCCAGCGACCGAAACCTACATCA +
Preference number: 3 (lower is better)
Translates to: GKEGWLRRGRQL*FSSFQRPKPTS
Trigger: TGATGTAGGTTTCGGTCGCTGGAAGCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CAA 90 bp GCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAGCAGCTAGACATGCAAGTTGCTaGGCTTCCTATTACCTTGTG +
Preference number: 3 (lower is better)
Translates to: ARGRKAGLGGGVSYGLAARHASC*ASYYLV
Trigger: CACAAGGTAATAGGAAGCCAAGCAACTTGCATGTCT...AGCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CAA 90 bp TGGAAGTCCCTCCACCTGGGGTCACTGACTCCACTGTTTTCAGATAGGATGGGGGGGATCACCAGCGCTTaGACTGACTTTGCTCGTCCA +
Preference number: 3 (lower is better)
Translates to: WKSLHLGSLTPLFSDRMGGITSA*TDFARP
Trigger: TGGACGAGCAAAGTCAGTCAAAGCGCTGGTGATCCC...CCCCATCCTATCTGAAAACAGTGGAGTCAGTGACCCCAGGTGGAGGGACTTCCA
56% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CAA 90 bp AAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAGCAGCTTCCAGCGACCGAACCTGGTGCTCAATATaGGGATCTCAGGAATCAGGA +
Preference number: 3 (lower is better)
Translates to: KAGLGGGVSYGLAASSDRTWCSI*GSQESG
Trigger: TCCTGATTCCTGAGATCCCAATATTGAGCACCAGGT...TCGGTCGCTGGAAGCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR GCA 72 bp CATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTaGTCAATATTGGGATCTCAGGAATCAGGACCGGCG +
Preference number: 3 (lower is better)
Translates to: HHSRSTQFQETW*SILGSQESGPA
Trigger: CGCCGGTCCTGATTCCTGAGATCCCAATATTGAGCACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR TCA 72 bp AGACTCTTCGCAAGTGACCCCGGGGCTACATATGGATaGTTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCAC +
Preference number: 3 (lower is better)
Translates to: RLFASDPGATYG*FKRESPRQKVH
Trigger: GTGAACTTTCTGGCGAGGAGACTCCCTCTTGAATCATCCATATGTAGCCCCGGGGTCACTTGCGAAGAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR CCA 72 bp TGCCCATGCTCAGCCCACCCCCTCTGTAGACACAATTaGTCGCCCATTCTGTTTATAGGAAGTCTTCCATCC +
Preference number: 3 (lower is better)
Translates to: CPCSAHPLCRHN*SPILFIGSLPS
Trigger: GGATGGAAGACTTCCTATAAACAGAATGGGCGACCAATTGTGTCTACAGAGGGGGTGGGCTGAGCATGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CAA 90 bp AACCTGGTGCTCAATATTGGGATCTCAGGAATCAGGACCGGCGGCTGGGGTGAATGGGAGACATGCAAGTaGCTTGGCTTCCTATTACCT +
Preference number: 3 (lower is better)
Translates to: NLVLNIGISGIRTGGWGEWETCK*LGFLLP
Trigger: AGGTAATAGGAAGCCAAGCAACTTGCATGTCTCCCA...TTCACCCCAGCCGCCGGTCCTGATTCCTGAGATCCCAATATTGAGCACCAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CAA 90 bp CGACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTGCTCAGACATGCAAGTTGCTaGGCTTCCTATTACCTTGTG +
Preference number: 3 (lower is better)
Translates to: RPKPTSQPQHTIPGNLVLRHASC*ASYYLV
Trigger: CACAAGGTAATAGGAAGCCAAGCAACTTGCATGTCT...GAGCACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR CCA 72 bp CCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCTCTaGATCACCTCCCTACCTCATCCTCAATCTAACGCT +
Preference number: 3 (lower is better)
Translates to: PLRGYFFLLRLL*ITSLPHPQSNA
Trigger: AGCGTTAGATTGAGGATGAGGTAGGGAGGTGATCCAGAGAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR CCA 72 bp GTCAAGCCTAAGGGTTCTAACAGCTCGAACAGCACCTaGAACAGAAGCAATAGCCGCCACTCAGAGGTTACT +
Preference number: 3 (lower is better)
Translates to: VKPKGSNSSNST*NRSNSRHSEVT
Trigger: AGTAACCTCTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCTTAGGCTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR CCA 72 bp CTACATCACAGCCGCAGCACACAATTCCAGGAAACCTaGTGCTCAATATTGGGATCTCAGGAATCAGGACCG +
Preference number: 3 (lower is better)
Translates to: LHHSRSTQFQET*CSILGSQESGP
Trigger: CGGTCCTGATTCCTGAGATCCCAATATTGAGCACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CAA 90 bp CTGGAGTTTTGCTTTATTGAAGTTGAACGGTTGGGGCCAGGCTGCGAAGGAGACTGGGAGACATGCAAGTaGCTTGGCTTCCTATTACCT +
Preference number: 3 (lower is better)
Translates to: LEFCFIEVERLGPGCEGDWETCK*LGFLLP
Trigger: AGGTAATAGGAAGCCAAGCAACTTGCATGTCTCCCA...GTCTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAATAAAGCAAAACTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CAA 90 bp CTGGAGTTTTGCTTTATTGAAGTTGAACGGTTGGGGCCAGGCTGCGAAGGAGACACCTGGTGCTCAATATaGGGATCTCAGGAATCAGGA +
Preference number: 3 (lower is better)
Translates to: LEFCFIEVERLGPGCEGDTWCSI*GSQESG
Trigger: TCCTGATTCCTGAGATCCCAATATTGAGCACCAGGT...GTCTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAATAAAGCAAAACTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR GCA 72 bp GGTAGGTCACCAAATGTTGCCAGAAGACTCAAATTATaGCACCCATATCTCAGCTGGGAAGGGCTTACCGTG +
Preference number: 3 (lower is better)
Translates to: GRSPNVARRLKL*HPYLSWEGLTV
Trigger: CACGGTAAGCCCTTCCCAGCTGAGATATGGGTGGCATAATTTGAGTCTTCTGGCAACATTTGGTGACCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CAA 90 bp GGCTACATATGGATGATTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACATGTTGTCCCTAGACAGGGATaGGGAGACATGCAAGTTGCT +
Preference number: 3 (lower is better)
Translates to: GYIWMIQEGVSSPESSHVVPRQG*GDMQVA
Trigger: AGCAACTTGCATGTCTCCCAATCCCTGTCTAGGGAC...AACATGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAATCATCCATATGTAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CAA 90 bp GGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGCCGCCACTCAGAGGTAGGTCACCAAATGTaGCCAGAAGACTCAAATTAT +
Preference number: 3 (lower is better)
Translates to: GSNSSNSTWNRSNSRHSEVGHQM*PEDSNY
Trigger: ATAATTTGAGTCTTCTGGCAACATTTGGTGACCTAC...CTCTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR CCA 72 bp TCTCCTCGCCAGAAAGTTCACATGTTTCACTCCTTCTaGCCTTCATACCAACCCATTGTTAAAACTGGAAGT +
Preference number: 3 (lower is better)
Translates to: SPRQKVHMFHSF*PSYQPIVKTGS
Trigger: ACTTCCAGTTTTAACAATGGGTTGGTATGAAGGCCAGAAGGAGTGAAACATGTGAACTTTCTGGCGAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CAA 90 bp GGCTACATATGGATGATTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACATGTTGTAGGTCACCAAATGTaGCCAGAAGACTCAAATTAT +
Preference number: 3 (lower is better)
Translates to: GYIWMIQEGVSSPESSHVVGHQM*PEDSNY
Trigger: ATAATTTGAGTCTTCTGGCAACATTTGGTGACCTAC...AACATGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAATCATCCATATGTAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR-3UTR CAA 90 bp GTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCATTTTTGTAGGTCACCAAATGTaGCCAGAAGACTCAAATTAT +
Preference number: 3 (lower is better)
Translates to: VCPRAHYQTPLTLGILIFVGHQM*PEDSNY
Trigger: ATAATTTGAGTCTTCTGGCAACATTTGGTGACCTAC...AAAAATGAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR CCA 72 bp GTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTaGAATCCTCATTTTTCAATAATAACTCACAAAGCT +
Preference number: 3 (lower is better)
Translates to: VPSCTLSNSSDS*NPHFSIITHKA
Trigger: AGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
3UTR GCA 72 bp GTTATTTTAATGTTATTTACTAGCAGTGTGCCCTCGTaGACATTATCAAACTCCTCTGACTCTTGGAATCCT +
Preference number: 3 (lower is better)
Translates to: VILMLFTSSVPS*TLSNSSDSWNP
Trigger: AGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGTAAATAACATTAAAATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp AGCGCGACAAGGCCCTGGACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGTCCAGGATCCGGTCCTaGGCACGCCCTGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SATRPWTDARAGKEGWLRSRIRS*ARPAWG
Trigger: GCCCCAGGCAGGGCGTGCCCAGGACCGGATCCTGGA...CCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGTCCAGGGCCTTGTCGCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410004.1
CDS-3UTR GCA 90 bp GGGGCCAGGCTGCGAAGGAGACTGAGAGCGCGACAAGGCCCTGGACAGATGCCCAAGGCCCTGGACAGATaGCCGCGCGGGGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GARLRRRLRARQGPGQMPKALDR*PRGEGR
Trigger: CCTTCCTTCCCCGCGCGGGCATCTGTCCAGGGCCTT...GGGCATCTGTCCAGGGCCTTGTCGCGCTCTCAGTCTCCTTCGCAGCCTGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp AGCGCGACAAGGCCCTGGACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGGCGGGGAAGGAAGGCTaGCTTAGGAGGGGGCGTCAG +
Preference number: 4 (lower is better)
Translates to: SATRPWTDARAGKEGWLRAGKEG*LRRGRQ
Trigger: CTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGC...CCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGTCCAGGGCCTTGTCGCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp ATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAGACCGGCGGCTGGGGTaGAAGCCTAGCGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: MPARGRKAGLGGGVSYGLDRRLG*KPSGQS
Trigger: GCTCTGACCGCTAGGCTTTCACCCCAGCCGCCGGTC...TAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGCGGGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GGGGCCAGGCTGCGAAGGAGACTGAGAGCGCGACAAGGCCCTGGACAGATGCCCCTGCTCTCTAGCCCCTaGGCAGGAGAGGCACAGACA +
Preference number: 4 (lower is better)
Translates to: GARLRRRLRARQGPGQMPLLSSP*AGEAQT
Trigger: TGTCTGTGCCTCTCCTGCCCAGGGGCTAGAGAGCAG...GGGCATCTGTCCAGGGCCTTGTCGCGCTCTCAGTCTCCTTCGCAGCCTGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp GCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAGCAGCTTCGGTCCCAATCCCATaGCCCTCCCGACCCTCGCAC +
Preference number: 4 (lower is better)
Translates to: ARGRKAGLGGGVSYGLAASVPIP*PSRPSH
Trigger: GTGCGAGGGTCGGGAGGGTCATGGGATTGGGACCGA...AGCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359333.8
CDS-3UTR GCA 90 bp GCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAGCAGCTAAGGCCCTGGACAGATaGCCGCGCGGGGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: ARGRKAGLGGGVSYGLAAKALDR*PRGEGR
Trigger: CCTTCCTTCCCCGCGCGGGCATCTGTCCAGGGCCTT...AGCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp AGCGCGACAAGGCCCTGGACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGGCCTCTGTTCCAGTTTaGCTCTCCTGGACCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SATRPWTDARAGKEGWLRASVPV*LSWTPL
Trigger: CAGAGGGGTCCAGGAGAGCCAAACTGGAACAGAGGC...CCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGTCCAGGGCCTTGTCGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp ACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGCTGCTCTCTAGCCCCTaGGCAGGAGAGGCACAGACA +
Preference number: 4 (lower is better)
Translates to: TDARAGKEGWLRRGRQLWLLSSP*AGEAQT
Trigger: TGTCTGTGCCTCTCCTGCCCAGGGGCTAGAGAGCAG...CCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp ACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGCACCAGCGCTTTGACTaGCTTTGCTCGTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TDARAGKEGWLRRGRQLWHQRFD*LCSSRR
Trigger: CCTCCTGGACGAGCAAAGTCAGTCAAAGCGCTGGTG...CCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp GGGGCCAGGCTGCGAAGGAGACTGAGAGCGCGACAAGGCCCTGGACAGATGCCCTCCGGTGTTAGCCCATaGTCCAGGTGGAGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: GARLRRRLRARQGPGQMPSGVSP*SRWREK
Trigger: TTTCTCCCTCCACCTGGAGCATGGGCTAACACCGGA...GGGCATCTGTCCAGGGCCTTGTCGCGCTCTCAGTCTCCTTCGCAGCCTGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359333.8
ENST00000410004.1
CDS-3UTR GCA 90 bp AGCGCGACAAGGCCCTGGACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGCCTGGGCTCTCAGTCTaGATTGATTGGAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SATRPWTDARAGKEGWLRPGLSV*IDWSWD
Trigger: GTCCCAGCTCCAATCAATGCAGACTGAGAGCCCAGG...CCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGTCCAGGGCCTTGTCGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GGGATCTCAGGAATCAGGACCGGCGGCTGGGGTGAAAGCCTAGCGGTCAGAGCTGCAGATCAGGAGCAGTaGACACAGCCCGTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: GISGIRTGGWGESLAVRAADQEQ*TQPVVP
Trigger: GGGGACCACGGGCTGTGTCCACTGCTCCTGATCTGC...AGCTCTGACCGCTAGGCTTTCACCCCAGCCGCCGGTCCTGATTCCTGAGATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp ACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTCTCCTGGACCCCTCTaGATGGCTAGGTTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: TDARAGKEGWLRRGRQLWSPGPL*MARLFL
Trigger: GAGGAACAACCTAGCCATCCAGAGGGGTCCAGGAGA...CCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GGCTGGGGACATGCGTGCCCATGCTCAGCCCACCCCCTCTGTAGACACAATTGGAGTGGACACAGCCCGTaGTCCCCGAAGCCGAAGGTT +
Preference number: 4 (lower is better)
Translates to: GWGHACPCSAHPLCRHNWSGHSP*SPKPKV
Trigger: AACCTTCGGCTTCGGGGACCACGGGCTGTGTCCACT...CCAATTGTGTCTACAGAGGGGGTGGGCTGAGCATGGGCACGCATGTCCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp AGCGCGACAAGGCCCTGGACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGCTTCTCCGCCTTCTCTaGATCACCTCCCTACCTCAT +
Preference number: 4 (lower is better)
Translates to: SATRPWTDARAGKEGWLRLLRLL*ITSLPH
Trigger: ATGAGGTAGGGAGGTGATCCAGAGAAGGCGGAGAAG...CCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGTCCAGGGCCTTGTCGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp GGGGCCAGGCTGCGAAGGAGACTGAGAGCGCGACAAGGCCCTGGACAGATGCCCGGGGCTACATATGGATaGTTCAAGAGGGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GARLRRRLRARQGPGQMPGATYG*FKRESP
Trigger: AGGAGACTCCCTCTTGAATCATCCATATGTAGCCCC...GGGCATCTGTCCAGGGCCTTGTCGCGCTCTCAGTCTCCTTCGCAGCCTGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp ATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAGGTGGAGGGAGAAAGTaGACACAGGCGCACCAAAGC +
Preference number: 4 (lower is better)
Translates to: MPARGRKAGLGGGVSYGLGGGRK*TQAHQS
Trigger: GCTTTGGTGCGCCTGTGTGCACTTTCTCCCTCCACC...TAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGCGGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359333.8
ENST00000410004.1
CDS-3UTR GCA 90 bp AAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAGCAGCTTCCAGCGACCGAGAGAGGCACAGACACTaGTACGCACGCGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KAGLGGGVSYGLAASSDRERHRH*YARGAG
Trigger: CCCTGCTCCGCGTGCGTAGCAGTGTCTGTGCCTCTC...TCGGTCGCTGGAAGCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp ATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAGGTTGGTCCAACTCTTaGGGGCGGCACTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: MPARGRKAGLGGGVSYGLGWSNS*GRHWDS
Trigger: AGAATCCCAGTGCCGCCCCCAAGAGTTGGACCAACC...TAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGCGGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GGGATCTCAGGAATCAGGACCGGCGGCTGGGGTGAAAGCCTAGCGGTCAGAGCTGGTTGGTCCAACTCTTaGGGGCGGCACTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: GISGIRTGGWGESLAVRAGWSNS*GRHWDS
Trigger: AGAATCCCAGTGCCGCCCCCAAGAGTTGGACCAACC...AGCTCTGACCGCTAGGCTTTCACCCCAGCCGCCGGTCCTGATTCCTGAGATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp ACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGCTTCTCCGCCTTCTCTaGATCACCTCCCTACCTCAT +
Preference number: 4 (lower is better)
Translates to: TDARAGKEGWLRRGRQLWLLRLL*ITSLPH
Trigger: ATGAGGTAGGGAGGTGATCCAGAGAAGGCGGAGAAG...CCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
3UTR CAA 72 bp CACTGCTACGCACGCGGAGCAGGGATCACCAGCGCTTaGACTGACTTTGCTCGTCCAGGAGGCTGGGGACAT +
Preference number: 4 (lower is better)
Translates to: HCYARGAGITSA*TDFARPGGWGH
Trigger: ATGTCCCCAGCCTCCTGGACGAGCAAAGTCAGTCAAAGCGCTGGTGATCCCTGCTCCGCGTGCGTAGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp GGCTGGGGACATGCGTGCCCATGCTCAGCCCACCCCCTCTGTAGACACAATTGGGCTCTCAGTCTGCATTaGTTGGAGCTGGGACCGAAG +
Preference number: 4 (lower is better)
Translates to: GWGHACPCSAHPLCRHNWALSLH*LELGPK
Trigger: CTTCGGTCCCAGCTCCAATCAATGCAGACTGAGAGC...CCAATTGTGTCTACAGAGGGGGTGGGCTGAGCATGGGCACGCATGTCCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp CAGCAGCTGTCCCTAGACAGGGATTGGGAGACATGCAAGTTGCTTGGCTTCCTAGACCGGCGGCTGGGGTaGAAGCCTAGCGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: QQLSLDRDWETCKLLGFLDRRLG*KPSGQS
Trigger: GCTCTGACCGCTAGGCTTTCACCCCAGCCGCCGGTC...TAGGAAGCCAAGCAACTTGCATGTCTCCCAATCCCTGTCTAGGGACAGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp TGGAAGTCCCTCCACCTGGGGTCACTGACTCCACTGTTTTCAGATAGGATGGGGGGCTGCGAAGGAGACTaGGAGCGCGACAAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: WKSLHLGSLTPLFSDRMGGCEGD*ERDKAL
Trigger: CAGGGCCTTGTCGCGCTCTCAGTCTCCTTCGCAGCC...CCCCATCCTATCTGAAAACAGTGGAGTCAGTGACCCCAGGTGGAGGGACTTCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp GCTTTATTGAAGTTGAACGGTTGGGGCCAGGCTGCGAAGGAGACTGAGAGCGCGCCCTGCACTGGAGACTaGTCTCTAGCCCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ALLKLNGWGQAAKETESAPCTGD*SLAPGQ
Trigger: CTGCCCAGGGGCTAGAGAGCAGTCTCCAGTGCAGGG...CGCGCTCTCAGTCTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAATAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp CGTCAGCTATGGTTTAGCAGCTTCCAGCGACCGAAACCTACATCACAGCCGCAGGTCCTGGGCACGCCCTaGCTGGGGCTTCAGTGCACA +
Preference number: 4 (lower is better)
Translates to: RQLWFSSFQRPKPTSQPQVLGTP*LGLQCT
Trigger: TGTGCACTGAAGCCCCAGGCAGGGCGTGCCCAGGAC...CTGCGGCTGTGATGTAGGTTTCGGTCGCTGGAAGCTGCTAAACCATAGCTGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410004.1
CDS-3UTR CCA 90 bp GGGGCCAGGCTGCGAAGGAGACTGAGAGCGCGACAAGGCCCTGGACAGATGCCCCCTGGTGCTCAATATTaGGATCTCAGGAATCAGGAC +
Preference number: 4 (lower is better)
Translates to: GARLRRRLRARQGPGQMPPGAQY*DLRNQD
Trigger: GTCCTGATTCCTGAGATCCCAATATTGAGCACCAGG...GGGCATCTGTCCAGGGCCTTGTCGCGCTCTCAGTCTCCTTCGCAGCCTGGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp AGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCTCTGGAAGCGCGACAAGGCCCTaGACAGATGCCCGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: RSNSRHSEVTSSFSAFSGSATRP*TDARAG
Trigger: CCCCGCGCGGGCATCTGTCCAGGGCCTTGTCGCGCT...TCCAGAGAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GGGATCTCAGGAATCAGGACCGGCGGCTGGGGTGAAAGCCTAGCGGTCAGAGCTTTGAAGTTGAACGGTTaGGGCCAGGCTGCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GISGIRTGGWGESLAVRALKLNG*GQAAKE
Trigger: CTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAA...AGCTCTGACCGCTAGGCTTTCACCCCAGCCGCCGGTCCTGATTCCTGAGATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp GGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGCCGCCACTCAGAGGTCCCGTGCATTGCCTaGGGGCCCTGGGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: GSNSSNSTWNRSNSRHSEVPCIA*GPWALS
Trigger: ACTGAGAGCCCAGGGCCCTCAGGCAATGCACGGGAC...CTCTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp GACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTGCTCAGGCTGCGAAGGAGACTaGGAGCGCGACAAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: DRNLHHSRSTQFQETWCSGCEGD*ERDKAL
Trigger: CAGGGCCTTGTCGCGCTCTCAGTCTCCTTCGCAGCC...TGAGCACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp TGGAAGTCCCTCCACCTGGGGTCACTGACTCCACTGTTTTCAGATAGGATGGGGGGACATGCGTGCCCATaGTCAGCCCACCCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: WKSLHLGSLTPLFSDRMGGHACP*SAHPLC
Trigger: ACAGAGGGGGTGGGCTGAGCATGGGCACGCATGTCC...CCCCATCCTATCTGAAAACAGTGGAGTCAGTGACCCCAGGTGGAGGGACTTCCA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp AACCTGGTGCTCAATATTGGGATCTCAGGAATCAGGACCGGCGGCTGGGGTGAAGAGAGGCACAGACACTaGTACGCACGCGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: NLVLNIGISGIRTGGWGEERHRH*YARGAG
Trigger: CCCTGCTCCGCGTGCGTAGCAGTGTCTGTGCCTCTC...TTCACCCCAGCCGCCGGTCCTGATTCCTGAGATCCCAATATTGAGCACCAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp CCAGCGACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTCCCTGCACTGGAGACTaGTCTCTAGCCCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PATETYITAAAHNSRKPGPCTGD*SLAPGQ
Trigger: CTGCCCAGGGGCTAGAGAGCAGTCTCCAGTGCAGGG...ACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTCGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TGGAAGTCCCTCCACCTGGGGTCACTGACTCCACTGTTTTCAGATAGGATGGGGCCAGGGCTTCCTTCCTaGGCCATGGACCCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: WKSLHLGSLTPLFSDRMGPGLPS*AMDPSE
Trigger: CTCAGAGGGGTCCATGGCCCAGGAAGGAAGCCCTGG...CCCCATCCTATCTGAAAACAGTGGAGTCAGTGACCCCAGGTGGAGGGACTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAGCAGCTAAGCCGAAGGTTGATTaGAGCTCTTCCAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ARGRKAGLGGGVSYGLAAKPKVD*SSSRAS
Trigger: GGAAGCCCTGGAAGAGCTCCAATCAACCTTCGGCTT...AGCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCAGCGCGACAAGGCCCTaGACAGATGCCCGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: LAVCPRAHYQTPLTLGILSATRP*TDARAG
Trigger: CCCCGCGCGGGCATCTGTCCAGGGCCTTGTCGCGCT...GAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp GGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGCCGCCACTCAGAGGGCCATGGACCCCTCTaGGGCCATTCGCCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: GSNSSNSTWNRSNSRHSEGHGPL*GHSPLF
Trigger: GAACAGAGGCGAATGGCCTCAGAGGGGTCCATGGCC...CTCTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp TCCTTCTCCGCCTTCTCTGGATCACCTCCCTACCTCATCCTCAATCTAACGCTGGGCCATGGACCCCTCTaGGGCCATTCGCCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: SFSAFSGSPPYLILNLTLGHGPL*GHSPLF
Trigger: GAACAGAGGCGAATGGCCTCAGAGGGGTCCATGGCC...CAGCGTTAGATTGAGGATGAGGTAGGGAGGTGATCCAGAGAAGGCGGAGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp CGACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTGCTCCCCGAAGCCGAAGGTTaGTTGGAGCTCTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RPKPTSQPQHTIPGNLVLPEAEG*LELFQG
Trigger: GCCCTGGAAGAGCTCCAATCAACCTTCGGCTTCGGG...GAGCACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp CTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCGACCGGCGGCTGGGGTaGAAGCCTAGCGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: LAVCPRAHYQTPLTLGILDRRLG*KPSGQS
Trigger: GCTCTGACCGCTAGGCTTTCACCCCAGCCGCCGGTC...GAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp GCTTTATTGAAGTTGAACGGTTGGGGCCAGGCTGCGAAGGAGACTGAGAGCGCGACTGCCGCCAAGCTCTaGAGATCAGGAGCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: ALLKLNGWGQAAKETESATAAKL*RSGAVD
Trigger: GTCCACTGCTCCTGATCTGCAGAGCTTGGCGGCAGT...CGCGCTCTCAGTCTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAATAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp ACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGGGGAGACATGCAAGTTaGTTGGCTTCCTATTACCTT +
Preference number: 4 (lower is better)
Translates to: TDARAGKEGWLRRGRQLWGRHAS*LASYYL
Trigger: AAGGTAATAGGAAGCCAAGCAACTTGCATGTCTCCC...CCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp CAGCAGCTGTCCCTAGACAGGGATTGGGAGACATGCAAGTTGCTTGGCTTCCTAGGACATGCGTGCCCATaGTCAGCCCACCCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: QQLSLDRDWETCKLLGFLGHACP*SAHPLC
Trigger: ACAGAGGGGGTGGGCTGAGCATGGGCACGCATGTCC...TAGGAAGCCAAGCAACTTGCATGTCTCCCAATCCCTGTCTAGGGACAGCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACATGTTTCACTCCTTCTGGCCTCAGGAGGTAGCCCAGTaGCTGGGAGGCGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: FKRESPRQKVHMFHSFWPQEVAQ*LGGGGQ
Trigger: CTGCCCACCGCCTCCCAGCCACTGGGCTACCTCCTG...AGGCCAGAAGGAGTGAAACATGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359333.8
CDS-3UTR CCA 90 bp AGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGCCGCCACTCAGAGTGCATTGGCACCATaGCCCCTCCCCAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: RVLTARTAPGTEAIAATQSALAP*PLPRLP
Trigger: AGGGAGCCTGGGGAGGGGCCATGGTGCCAATGCACT...CTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359333.8
ENST00000409244.5
CDS-3UTR CCA 90 bp GACTCTTCGCAAGTGACCCCGGGGCTACATATGGATGATTCAAGAGGGAGTCTCGCAGATCAGGAGCAGTaGACACAGCCCGTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: DSSQVTPGLHMDDSRGSLADQEQ*TQPVVP
Trigger: GGGGACCACGGGCTGTGTCCACTGCTCCTGATCTGC...GAGACTCCCTCTTGAATCATCCATATGTAGCCCCGGGGTCACTTGCGAAGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp AGGCCCTGGACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTAAACACAATAGGCTTTaGGATCAGGAGTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: RPWTDARAGKEGWLRRGRKHNRL*DQEFIP
Trigger: TGGAATGAACTCCTGATCCCAAAGCCTATTGTGTTT...ACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGTCCAGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TGGAAGTCCCTCCACCTGGGGTCACTGACTCCACTGTTTTCAGATAGGATGGGGCTGCTCTCTAGCCCCTaGGCAGGAGAGGCACAGACA +
Preference number: 4 (lower is better)
Translates to: WKSLHLGSLTPLFSDRMGLLSSP*AGEAQT
Trigger: TGTCTGTGCCTCTCCTGCCCAGGGGCTAGAGAGCAG...CCCCATCCTATCTGAAAACAGTGGAGTCAGTGACCCCAGGTGGAGGGACTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGCCGCCACTCAGAGATCAGGACCGGCGGCTaGGGTGAAAGCCTAGCGGTC +
Preference number: 4 (lower is better)
Translates to: GSNSSNSTWNRSNSRHSEIRTGG*GESLAV
Trigger: GACCGCTAGGCTTTCACCCCAGCCGCCGGTCCTGAT...CTCTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GGGGCCAGGCTGCGAAGGAGACTGAGAGCGCGACAAGGCCCTGGACAGATGCCCCAATTCCAGGAAACCTaGTGCTCAATATTGGGATCT +
Preference number: 4 (lower is better)
Translates to: GARLRRRLRARQGPGQMPQFQET*CSILGS
Trigger: AGATCCCAATATTGAGCACCAGGTTTCCTGGAATTG...GGGCATCTGTCCAGGGCCTTGTCGCGCTCTCAGTCTCCTTCGCAGCCTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp AAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAGCAGCTTCCAGCGACCGAAGGGGGCGTCAGCTATaGTTTAGCAGCTTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: KAGLGGGVSYGLAASSDRRGRQL*FSSFQR
Trigger: TCGCTGGAAGCTGCTAAACCATAGCTGACGCCCCCT...TCGGTCGCTGGAAGCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GGGATCTCAGGAATCAGGACCGGCGGCTGGGGTGAAAGCCTAGCGGTCAGAGCTGGCTTCAGTGCACACTaGCATCTCTGGAATTCAGGT +
Preference number: 4 (lower is better)
Translates to: GISGIRTGGWGESLAVRAGFSAH*HLWNSG
Trigger: ACCTGAATTCCAGAGATGCCAGTGTGCACTGAAGCC...AGCTCTGACCGCTAGGCTTTCACCCCAGCCGCCGGTCCTGATTCCTGAGATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410004.1
CDS-3UTR CCA 90 bp GACTCTTCGCAAGTGACCCCGGGGCTACATATGGATGATTCAAGAGGGAGTCTCAGTGCATTGGCACCATaGCCCCTCCCCAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: DSSQVTPGLHMDDSRGSLSALAP*PLPRLL
Trigger: CAGGAGCCTGGGGAGGGGCCATGGTGCCAATGCACT...GAGACTCCCTCTTGAATCATCCATATGTAGCCCCGGGGTCACTTGCGAAGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409541.5
CDS-3UTR TCA 90 bp TCCTTCTCCGCCTTCTCTGGATCACCTCCCTACCTCATCCTCAATCTAACGCTGCCCGAAGCCGAAGGTTaGTTGGAGCTCTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SFSAFSGSPPYLILNLTLPEAEG*LELFQG
Trigger: GCCCTGGAAGAGCTCCAATCAACCTTCGGCTTCGGG...CAGCGTTAGATTGAGGATGAGGTAGGGAGGTGATCCAGAGAAGGCGGAGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp GGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGCCGCCACTCAGAGCCCGAAGCCGAAGGTTaGTTGGAGCTCTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GSNSSNSTWNRSNSRHSEPEAEG*LELFQG
Trigger: GCCCTGGAAGAGCTCCAATCAACCTTCGGCTTCGGG...CTCTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp ACTCAAATTATGCCACCCATATCTCAGCTGGGAAGGGCTTACCGTGGCCTGACTGGGCTTACCGTGGCCTaGCTCTCCTCAGGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: TQIMPPISQLGRAYRGLTGLTVA*LSSGSK
Trigger: CTTGGACCCTGAGGAGAGTCAGGCCACGGTAAGCCC...AGTCAGGCCACGGTAAGCCCTTCCCAGCTGAGATATGGGTGGCATAATTTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp CCAGCGACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTACTGCCGCCAAGCTCTaGAGATCAGGAGCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: PATETYITAAAHNSRKPGTAAKL*RSGAVD
Trigger: GTCCACTGCTCCTGATCTGCAGAGCTTGGCGGCAGT...ACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTCGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp AGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCTCTGGAGGACATGCGTGCCCATaGTCAGCCCACCCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: RSNSRHSEVTSSFSAFSGGHACP*SAHPLC
Trigger: ACAGAGGGGGTGGGCTGAGCATGGGCACGCATGTCC...TCCAGAGAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp GGCCTTCATACCAACCCATTGTTAAAACTGGAAGTCCCTCCACCTGGGGTCACTGAGAGGCACAGACACTaGTACGCACGCGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GLHTNPLLKLEVPPPGVTERHRH*YARGAG
Trigger: CCCTGCTCCGCGTGCGTAGCAGTGTCTGTGCCTCTC...AGTGACCCCAGGTGGAGGGACTTCCAGTTTTAACAATGGGTTGGTATGAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp GCTGTCAAGCCTAAGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAAGGCCCTGGACAGATaGCCGCGCGGGGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: AVKPKGSNSSNSTWNRSNKALDR*PRGEGR
Trigger: CCTTCCTTCCCCGCGCGGGCATCTGTCCAGGGCCTT...ATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCTTAGGCTTGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TGGAACAGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCCCAGGGCTTCCTTCCTaGGCCATGGACCCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: WNRSNSRHSEVTSSFSAFPGLPS*AMDPSE
Trigger: CTCAGAGGGGTCCATGGCCCAGGAAGGAAGCCCTGG...GAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCTGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CTGGAGTTTTGCTTTATTGAAGTTGAACGGTTGGGGCCAGGCTGCGAAGGAGACCCAGGGCTTCCTTCCTaGGCCATGGACCCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LEFCFIEVERLGPGCEGDPGLPS*AMDPSE
Trigger: CTCAGAGGGGTCCATGGCCCAGGAAGGAAGCCCTGG...GTCTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAATAAAGCAAAACTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGCCGCCACTCAGAGAGTGGACACAGCCCGTaGTCCCCGAAGCCGAAGGTT +
Preference number: 4 (lower is better)
Translates to: GSNSSNSTWNRSNSRHSESGHSP*SPKPKV
Trigger: AACCTTCGGCTTCGGGGACCACGGGCTGTGTCCACT...CTCTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TGGAACAGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCGCAGATCAGGAGCAGTaGACACAGCCCGTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: WNRSNSRHSEVTSSFSAFADQEQ*TQPVVP
Trigger: GGGGACCACGGGCTGTGTCCACTGCTCCTGATCTGC...GAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCTGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CCGGGGCTACATATGGATGATTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACAGCAGATCAGGAGCAGTaGACACAGCCCGTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: PGLHMDDSRGSLLARKFTADQEQ*TQPVVP
Trigger: GGGGACCACGGGCTGTGTCCACTGCTCCTGATCTGC...TGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAATCATCCATATGTAGCCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTGCTCAGGGAAGGGCTTACCGTaGCCTGACTCTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: DRNLHHSRSTQFQETWCSGKGLP*PDSPQG
Trigger: ACCCTGAGGAGAGTCAGGCCACGGTAAGCCCTTCCC...TGAGCACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGCCGCCACTCAGAGGGGAAGGGCTTACCGTaGCCTGACTCTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: GSNSSNSTWNRSNSRHSEGKGLP*PDSPQG
Trigger: ACCCTGAGGAGAGTCAGGCCACGGTAAGCCCTTCCC...CTCTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TGGAACAGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCATCAGGACCGGCGGCTaGGGTGAAAGCCTAGCGGTC +
Preference number: 4 (lower is better)
Translates to: WNRSNSRHSEVTSSFSAFIRTGG*GESLAV
Trigger: GACCGCTAGGCTTTCACCCCAGCCGCCGGTCCTGAT...GAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCTGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GGCTACATATGGATGATTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACATGTTAGCGCGACAAGGCCCTaGACAGATGCCCGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: GYIWMIQEGVSSPESSHVSATRP*TDARAG
Trigger: CCCCGCGCGGGCATCTGTCCAGGGCCTTGTCGCGCT...AACATGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAATCATCCATATGTAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp GCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAGCAGCTAGAAGCCACCCAATGTaGGAAAGAAATAAGCAACGG +
Preference number: 4 (lower is better)
Translates to: ARGRKAGLGGGVSYGLAARSHPM*ERNKQR
Trigger: CCGTTGCTTATTTCTTTCTCACATTGGGTGGCTTCT...AGCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp ACAAAGCTGTCAAGCCTAAGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGTCCCGTGCATTGCCTaGGGGCCCTGGGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: TKLSSLRVLTARTAPGTEVPCIA*GPWALS
Trigger: ACTGAGAGCCCAGGGCCCTCAGGCAATGCACGGGAC...TTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCTTAGGCTTGACAGCTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp GGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGCCGCCACTCAGAGCACCAGCGCTTTGACTaGCTTTGCTCGTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GSNSSNSTWNRSNSRHSEHQRFD*LCSSRR
Trigger: CCTCCTGGACGAGCAAAGTCAGTCAAAGCGCTGGTG...CTCTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp AAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAGCAGCTTCCAGCGACCGATCCACCTGGGGTCACTaGCTCCACTGTTTTCAGATA +
Preference number: 4 (lower is better)
Translates to: KAGLGGGVSYGLAASSDRSTWGH*LHCFQI
Trigger: TATCTGAAAACAGTGGAGTCAGTGACCCCAGGTGGA...TCGGTCGCTGGAAGCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp CAGCAGCTGTCCCTAGACAGGGATTGGGAGACATGCAAGTTGCTTGGCTTCCTAGGTGGAGGGAGAAAGTaGACACAGGCGCACCAAAGC +
Preference number: 4 (lower is better)
Translates to: QQLSLDRDWETCKLLGFLGGGRK*TQAHQS
Trigger: GCTTTGGTGCGCCTGTGTGCACTTTCTCCCTCCACC...TAGGAAGCCAAGCAACTTGCATGTCTCCCAATCCCTGTCTAGGGACAGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359333.8
ENST00000410004.1
CDS-3UTR GCA 90 bp AACCTGGTGCTCAATATTGGGATCTCAGGAATCAGGACCGGCGGCTGGGGTGAATCCGGTGTTAGCCCATaGTCCAGGTGGAGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: NLVLNIGISGIRTGGWGESGVSP*SRWREK
Trigger: TTTCTCCCTCCACCTGGAGCATGGGCTAACACCGGA...TTCACCCCAGCCGCCGGTCCTGATTCCTGAGATCCCAATATTGAGCACCAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359333.8
ENST00000410004.1
CDS-3UTR GCA 90 bp CGACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTGCTCAGTCTCCCCAGTAAGTaGATTGGCACCATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: RPKPTSQPQHTIPGNLVLSLPSK*IGTMAP
Trigger: AGGGGCCATGGTGCCAATGCACTTACTGGGGAGACT...GAGCACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp GCTTTATTGAAGTTGAACGGTTGGGGCCAGGCTGCGAAGGAGACTGAGAGCGCGATAGGATGGGGACCCTaGACTGGAGACTGCTCTCTA +
Preference number: 4 (lower is better)
Translates to: ALLKLNGWGQAAKETESAIGWGP*TGDCSL
Trigger: TAGAGAGCAGTCTCCAGTGCAGGGTCCCCATCCTAT...CGCGCTCTCAGTCTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAATAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TGGAACAGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCTCTTGGGGGCGGCACTaGGATTCTAGTCCCACCACG +
Preference number: 4 (lower is better)
Translates to: WNRSNSRHSEVTSSFSAFSWGRH*DSSPTT
Trigger: CGTGGTGGGACTAGAATCCCAGTGCCGCCCCCAAGA...GAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCTGTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TGGAAGTCCCTCCACCTGGGGTCACTGACTCCACTGTTTTCAGATAGGATGGGGCTGGACCCCTCTGGATaGCTAGGTTGTTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: WKSLHLGSLTPLFSDRMGLDPSG*LGCSSS
Trigger: TGAGGAGGAACAACCTAGCCATCCAGAGGGGTCCAG...CCCCATCCTATCTGAAAACAGTGGAGTCAGTGACCCCAGGTGGAGGGACTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp AACCTGGTGCTCAATATTGGGATCTCAGGAATCAGGACCGGCGGCTGGGGTGAATCTCCTGGACCCCTCTaGATGGCTAGGTTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: NLVLNIGISGIRTGGWGESPGPL*MARLFL
Trigger: GAGGAACAACCTAGCCATCCAGAGGGGTCCAGGAGA...TTCACCCCAGCCGCCGGTCCTGATTCCTGAGATCCCAATATTGAGCACCAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCCTTCTCCGCCTTCTCTGGATCACCTCCCTACCTCATCCTCAATCTAACGCTGTTCCTTCCTGGGCCATaGACCCCTCTGAGGCCATTC +
Preference number: 4 (lower is better)
Translates to: SFSAFSGSPPYLILNLTLFLPGP*TPLRPF
Trigger: GAATGGCCTCAGAGGGGTCCATGGCCCAGGAAGGAA...CAGCGTTAGATTGAGGATGAGGTAGGGAGGTGATCCAGAGAAGGCGGAGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp AGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCTCTGGAAGTGGACACAGCCCGTaGTCCCCGAAGCCGAAGGTT +
Preference number: 4 (lower is better)
Translates to: RSNSRHSEVTSSFSAFSGSGHSP*SPKPKV
Trigger: AACCTTCGGCTTCGGGGACCACGGGCTGTGTCCACT...TCCAGAGAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TGGAACAGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCAGTGGACACAGCCCGTaGTCCCCGAAGCCGAAGGTT +
Preference number: 4 (lower is better)
Translates to: WNRSNSRHSEVTSSFSAFSGHSP*SPKPKV
Trigger: AACCTTCGGCTTCGGGGACCACGGGCTGTGTCCACT...GAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCTGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TGGAACAGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCGGGAAGGGCTTACCGTaGCCTGACTCTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: WNRSNSRHSEVTSSFSAFGKGLP*PDSPQG
Trigger: ACCCTGAGGAGAGTCAGGCCACGGTAAGCCCTTCCC...GAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCTGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp AGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGCCGCCACTCAGGCTCTCAGTCTGCATTaGTTGGAGCTGGGACCGAAG +
Preference number: 4 (lower is better)
Translates to: RVLTARTAPGTEAIAATQALSLH*LELGPK
Trigger: CTTCGGTCCCAGCTCCAATCAATGCAGACTGAGAGC...CTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp CAGCAGCTGTCCCTAGACAGGGATTGGGAGACATGCAAGTTGCTTGGCTTCCTAGCTCTCAGTCTGCATTaGTTGGAGCTGGGACCGAAG +
Preference number: 4 (lower is better)
Translates to: QQLSLDRDWETCKLLGFLALSLH*LELGPK
Trigger: CTTCGGTCCCAGCTCCAATCAATGCAGACTGAGAGC...TAGGAAGCCAAGCAACTTGCATGTCTCCCAATCCCTGTCTAGGGACAGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp ACAAAGCTGTCAAGCCTAAGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGGCCATGGACCCCTCTaGGGCCATTCGCCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: TKLSSLRVLTARTAPGTEGHGPL*GHSPLF
Trigger: GAACAGAGGCGAATGGCCTCAGAGGGGTCCATGGCC...TTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCTTAGGCTTGACAGCTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp CTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCCCCGAAGCCGAAGGTTaGTTGGAGCTCTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LAVCPRAHYQTPLTLGILPEAEG*LELFQG
Trigger: GCCCTGGAAGAGCTCCAATCAACCTTCGGCTTCGGG...GAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp GGCCTTCATACCAACCCATTGTTAAAACTGGAAGTCCCTCCACCTGGGGTCACTCACCAGCGCTTTGACTaGCTTTGCTCGTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GLHTNPLLKLEVPPPGVTHQRFD*LCSSRR
Trigger: CCTCCTGGACGAGCAAAGTCAGTCAAAGCGCTGGTG...AGTGACCCCAGGTGGAGGGACTTCCAGTTTTAACAATGGGTTGGTATGAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp AGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGCCGCCACTCAGGGATCACCAGCGCTTTaGCTGACTTTGCTCGTCCAG +
Preference number: 4 (lower is better)
Translates to: RVLTARTAPGTEAIAATQGSPAL*LTLLVQ
Trigger: CTGGACGAGCAAAGTCAGTCAAAGCGCTGGTGATCC...CTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp CTGGAGTTTTGCTTTATTGAAGTTGAACGGTTGGGGCCAGGCTGCGAAGGAGACGAGACTCTTCGCAAGTaGCCCCGGGGCTACATATGG +
Preference number: 4 (lower is better)
Translates to: LEFCFIEVERLGPGCEGDETLRK*PRGYIW
Trigger: CCATATGTAGCCCCGGGGTCACTTGCGAAGAGTCTC...GTCTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAATAAAGCAAAACTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp CCGGGGCTACATATGGATGATTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACATCTCTGGAATTCAGGTaGTGGGGCAGGCCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: PGLHMDDSRGSLLARKFTSLEFR*WGRPLS
Trigger: AGACAGGGGCCTGCCCCATCACCTGAATTCCAGAGA...TGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAATCATCCATATGTAGCCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410004.1
CDS-3UTR GCA 90 bp GACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTGCTCAAGTCTCCCCAGTAAGTaGATTGGCACCATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: DRNLHHSRSTQFQETWCSSLPSK*IGTMAP
Trigger: AGGGGCCATGGTGCCAATGCACTTACTGGGGAGACT...TGAGCACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp TGGAACAGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCACTGCCGCCAAGCTCTaGAGATCAGGAGCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: WNRSNSRHSEVTSSFSAFTAAKL*RSGAVD
Trigger: GTCCACTGCTCCTGATCTGCAGAGCTTGGCGGCAGT...GAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCTGTTCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGCCGCCACTCAGAGTCAGTCTGCATTGATTaGAGCTGGGACCGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: GSNSSNSTWNRSNSRHSESVCID*SWDRSP
Trigger: GGGGCTTCGGTCCCAGCTCCAATCAATGCAGACTGA...CTCTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GACTCTTCGCAAGTGACCCCGGGGCTACATATGGATGATTCAAGAGGGAGTCTCTCAGTCTGCATTGATTaGAGCTGGGACCGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: DSSQVTPGLHMDDSRGSLSVCID*SWDRSP
Trigger: GGGGCTTCGGTCCCAGCTCCAATCAATGCAGACTGA...GAGACTCCCTCTTGAATCATCCATATGTAGCCCCGGGGTCACTTGCGAAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CCAGCGACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTTTCCTCCTCAGGTGCTaGGGGTATCACAACAGTGCT +
Preference number: 4 (lower is better)
Translates to: PATETYITAAAHNSRKPGFLLRC*GYHNSA
Trigger: AGCACTGTTGTGATACCCCCAGCACCTGAGGAGGAA...ACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTCGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCCTTCTCCGCCTTCTCTGGATCACCTCCCTACCTCATCCTCAATCTAACGCTGCTGGACCCCTCTGGATaGCTAGGTTGTTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SFSAFSGSPPYLILNLTLLDPSG*LGCSSS
Trigger: TGAGGAGGAACAACCTAGCCATCCAGAGGGGTCCAG...CAGCGTTAGATTGAGGATGAGGTAGGGAGGTGATCCAGAGAAGGCGGAGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCCTTCTCCGCCTTCTCTGGATCACCTCCCTACCTCATCCTCAATCTAACGCTGTCTCCTGGACCCCTCTaGATGGCTAGGTTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: SFSAFSGSPPYLILNLTLSPGPL*MARLFL
Trigger: GAGGAACAACCTAGCCATCCAGAGGGGTCCAGGAGA...CAGCGTTAGATTGAGGATGAGGTAGGGAGGTGATCCAGAGAAGGCGGAGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TGGAACAGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCTTCCTTCCTGGGCCATaGACCCCTCTGAGGCCATTC +
Preference number: 4 (lower is better)
Translates to: WNRSNSRHSEVTSSFSAFFLPGP*TPLRPF
Trigger: GAATGGCCTCAGAGGGGTCCATGGCCCAGGAAGGAA...GAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCTGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp AGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCTCTGGATTCCTTCCTGGGCCATaGACCCCTCTGAGGCCATTC +
Preference number: 4 (lower is better)
Translates to: RSNSRHSEVTSSFSAFSGFLPGP*TPLRPF
Trigger: GAATGGCCTCAGAGGGGTCCATGGCCCAGGAAGGAA...TCCAGAGAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GCTTCCAGCGACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCAAGCCGAAGGTTGATTaGAGCTCTTCCAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ASSDRNLHHSRSTQFQETKPKVD*SSSRAS
Trigger: GGAAGCCCTGGAAGAGCTCCAATCAACCTTCGGCTT...GGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTCGCTGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GCTGTCAAGCCTAAGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGTGGACACAGCCCGTaGTCCCCGAAGCCGAAGGTT +
Preference number: 4 (lower is better)
Translates to: AVKPKGSNSSNSTWNRSNSGHSP*SPKPKV
Trigger: AACCTTCGGCTTCGGGGACCACGGGCTGTGTCCACT...ATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCTTAGGCTTGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp AGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGCCGCCACTCAGTCAGAGGCTCTAATGTaGGGACTGCCGCCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: RVLTARTAPGTEAIAATQSEALM*GLPPSS
Trigger: AGAGCTTGGCGGCAGTCCCCACATTAGAGCCTCTGA...CTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAGCAGCTAGAGAAGAGAAATCTTaGGAGAGTCATTTAAGGGGG +
Preference number: 4 (lower is better)
Translates to: ARGRKAGLGGGVSYGLAAREEKS*ESHLRG
Trigger: CCCCCTTAAATGACTCTCCCAAGATTTCTCTTCTCT...AGCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CGACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTGCTCAGCTCGAACAGCACCTaGAACAGAAGCAATAGCCGC +
Preference number: 4 (lower is better)
Translates to: RPKPTSQPQHTIPGNLVLSSNST*NRSNSR
Trigger: GCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCT...GAGCACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TGGAAGTCCCTCCACCTGGGGTCACTGACTCCACTGTTTTCAGATAGGATGGGGAGCTCGAACAGCACCTaGAACAGAAGCAATAGCCGC +
Preference number: 4 (lower is better)
Translates to: WKSLHLGSLTPLFSDRMGSSNST*NRSNSR
Trigger: GCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCT...CCCCATCCTATCTGAAAACAGTGGAGTCAGTGACCCCAGGTGGAGGGACTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CTCTGTAGACACAATTGGTCGCCCATTCTGTTTATAGGAAGTCTTCCATCCTGCTGGGCACGCCCTGCCTaGGGCTTCAGTGCACACTGG +
Preference number: 4 (lower is better)
Translates to: LCRHNWSPILFIGSLPSCWARPA*GFSAHW
Trigger: CCAGTGTGCACTGAAGCCCCAGGCAGGGCGTGCCCA...GCAGGATGGAAGACTTCCTATAAACAGAATGGGCGACCAATTGTGTCTACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410004.1
CDS-3UTR TCA 90 bp TCCCCATTTATGATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCGGCCATGGACCCCTCTaGGGCCATTCGCCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: SPFMMSRQKHLFLTHSRRGHGPL*GHSPLF
Trigger: GAACAGAGGCGAATGGCCTCAGAGGGGTCCATGGCC...GCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACATCATAAATGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp TGGAACAGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCGGATCACCAGCGCTTTaGCTGACTTTGCTCGTCCAG +
Preference number: 4 (lower is better)
Translates to: WNRSNSRHSEVTSSFSAFGSPAL*LTLLVQ
Trigger: CTGGACGAGCAAAGTCAGTCAAAGCGCTGGTGATCC...GAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCTGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp GTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCATTTTTGGCTGCGAAGGAGACTaGGAGCGCGACAAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: VCPRAHYQTPLTLGILIFGCEGD*ERDKAL
Trigger: CAGGGCCTTGTCGCGCTCTCAGTCTCCTTCGCAGCC...AAAAATGAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp TGGAAGTCCCTCCACCTGGGGTCACTGACTCCACTGTTTTCAGATAGGATGGGGAGTTTGCAAATTTCCTaGCAGGAGGTAGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: WKSLHLGSLTPLFSDRMGSLQIS*QEVAQW
Trigger: CCACTGGGCTACCTCCTGGCAGGAAATTTGCAAACT...CCCCATCCTATCTGAAAACAGTGGAGTCAGTGACCCCAGGTGGAGGGACTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359333.8
CDS-3UTR GCA 90 bp CTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCGGTGGAGGGAGAAAGTaGACACAGGCGCACCAAAGC +
Preference number: 4 (lower is better)
Translates to: LAVCPRAHYQTPLTLGILGGGRK*TQAHQS
Trigger: GCTTTGGTGCGCCTGTGTGCACTTTCTCCCTCCACC...GAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409244.5
ENST00000410004.1
CDS-3UTR GCA 90 bp TGGAACAGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCTCCGGTGTTAGCCCATaGTCCAGGTGGAGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: WNRSNSRHSEVTSSFSAFSGVSP*SRWREK
Trigger: TTTCTCCCTCCACCTGGAGCATGGGCTAACACCGGA...GAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCTGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409244.5
ENST00000410004.1
CDS-3UTR GCA 90 bp AACCTGGTGCTCAATATTGGGATCTCAGGAATCAGGACCGGCGGCTGGGGTGAATTGTTCCTCCTCAGGTaGTGGGGGTATCACAACAGT +
Preference number: 4 (lower is better)
Translates to: NLVLNIGISGIRTGGWGELFLLR*WGYHNS
Trigger: ACTGTTGTGATACCCCCAGCACCTGAGGAGGAACAA...TTCACCCCAGCCGCCGGTCCTGATTCCTGAGATCCCAATATTGAGCACCAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp GCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAGCAGCTTATTTACTAGCAGTGTaGCCTCGTGCACATTATCAA +
Preference number: 4 (lower is better)
Translates to: ARGRKAGLGGGVSYGLAAYLLAV*PRAHYQ
Trigger: TTGATAATGTGCACGAGGGCACACTGCTAGTAAATA...AGCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GGCCTTCATACCAACCCATTGTTAAAACTGGAAGTCCCTCCACCTGGGGTCACTAAAGGCCCAGCACAATaGCCGGAGGCCCTGATAACT +
Preference number: 4 (lower is better)
Translates to: GLHTNPLLKLEVPPPGVTKGPAQ*PEALIT
Trigger: AGTTATCAGGGCCTCCGGCCATTGTGCTGGGCCTTT...AGTGACCCCAGGTGGAGGGACTTCCAGTTTTAACAATGGGTTGGTATGAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359333.8
CDS-3UTR CCA 90 bp ACTCAAATTATGCCACCCATATCTCAGCTGGGAAGGGCTTACCGTGGCCTGACTTGCATTGATTGGAGCTaGGACCGAAGCCCCCATTCC +
Preference number: 4 (lower is better)
Translates to: TQIMPPISQLGRAYRGLTCIDWS*DRSPHS
Trigger: GGAATGGGGGCTTCGGTCCCAGCTCCAATCAATGCA...AGTCAGGCCACGGTAAGCCCTTCCCAGCTGAGATATGGGTGGCATAATTTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp ACTCAAATTATGCCACCCATATCTCAGCTGGGAAGGGCTTACCGTGGCCTGACTTCAGTCTGCATTGATTaGAGCTGGGACCGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: TQIMPPISQLGRAYRGLTSVCID*SWDRSP
Trigger: GGGGCTTCGGTCCCAGCTCCAATCAATGCAGACTGA...AGTCAGGCCACGGTAAGCCCTTCCCAGCTGAGATATGGGTGGCATAATTTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TGGAACAGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCTCTCCTGGACCCCTCTaGATGGCTAGGTTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: WNRSNSRHSEVTSSFSAFSPGPL*MARLFL
Trigger: GAGGAACAACCTAGCCATCCAGAGGGGTCCAGGAGA...GAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCTGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp AGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCTCTGGATCAGAGGCTCTAATGTaGGGACTGCCGCCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: RSNSRHSEVTSSFSAFSGSEALM*GLPPSS
Trigger: AGAGCTTGGCGGCAGTCCCCACATTAGAGCCTCTGA...TCCAGAGAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GGGATCTCAGGAATCAGGACCGGCGGCTGGGGTGAAAGCCTAGCGGTCAGAGCTCTCTGTAGACACAATTaGTCGCCCATTCTGTTTATA +
Preference number: 4 (lower is better)
Translates to: GISGIRTGGWGESLAVRALCRHN*SPILFI
Trigger: TATAAACAGAATGGGCGACCAATTGTGTCTACAGAG...AGCTCTGACCGCTAGGCTTTCACCCCAGCCGCCGGTCCTGATTCCTGAGATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TTTACTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATGCTCGTCCAGGAGGCTaGGGACATGCGTGCCCATGC +
Preference number: 4 (lower is better)
Translates to: FTSSVPSCTLSNSSDSWNARPGG*GHACPC
Trigger: GCATGGGCACGCATGTCCCCAGCCTCCTGGACGAGC...ATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCATTTTTGCTCGTCCAGGAGGCTaGGGACATGCGTGCCCATGC +
Preference number: 4 (lower is better)
Translates to: VCPRAHYQTPLTLGILIFARPGG*GHACPC
Trigger: GCATGGGCACGCATGTCCCCAGCCTCCTGGACGAGC...AAAAATGAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp AACCTGGTGCTCAATATTGGGATCTCAGGAATCAGGACCGGCGGCTGGGGTGAATGTTTTCAGATAGGATaGGGACCCTGCACTGGAGAC +
Preference number: 4 (lower is better)
Translates to: NLVLNIGISGIRTGGWGECFQIG*GPCTGD
Trigger: GTCTCCAGTGCAGGGTCCCCATCCTATCTGAAAACA...TTCACCCCAGCCGCCGGTCCTGATTCCTGAGATCCCAATATTGAGCACCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCCTTCTCCGCCTTCTCTGGATCACCTCCCTACCTCATCCTCAATCTAACGCTGCCCCGGGGCTACATATaGATGATTCAAGAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: SFSAFSGSPPYLILNLTLPRGYI*MIQEGV
Trigger: GACTCCCTCTTGAATCATCCATATGTAGCCCCGGGG...CAGCGTTAGATTGAGGATGAGGTAGGGAGGTGATCCAGAGAAGGCGGAGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTGCTCACCCCGGGGCTACATATaGATGATTCAAGAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: DRNLHHSRSTQFQETWCSPRGYI*MIQEGV
Trigger: GACTCCCTCTTGAATCATCCATATGTAGCCCCGGGG...TGAGCACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAATGTTAGTCGCGGGGAAGGAAGGCTaGCTTAGGAGGGGGCGTCAG +
Preference number: 4 (lower is better)
Translates to: SRQKHLFLTHSRRWKMLVAGKEG*LRRGRQ
Trigger: CTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGC...GACTAACATTTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp GACTCTTCGCAAGTGACCCCGGGGCTACATATGGATGATTCAAGAGGGAGTCTCAATAAGCAACGGGGGTaGTGTCCGTCTTTATGCCCA +
Preference number: 4 (lower is better)
Translates to: DSSQVTPGLHMDDSRGSLNKQRG*CPSLCP
Trigger: TGGGCATAAAGACGGACATCACCCCCGTTGCTTATT...GAGACTCCCTCTTGAATCATCCATATGTAGCCCCGGGGTCACTTGCGAAGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp TTTATGATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAGTCCCGTGCATTGCCTaGGGGCCCTGGGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: FMMSRQKHLFLTHSRRWKVPCIA*GPWALS
Trigger: ACTGAGAGCCCAGGGCCCTCAGGCAATGCACGGGAC...TTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACATCATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp TCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAATGTTAGTCGGCCATGGACCCCTCTaGGGCCATTCGCCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: SRQKHLFLTHSRRWKMLVGHGPL*GHSPLF
Trigger: GAACAGAGGCGAATGGCCTCAGAGGGGTCCATGGCC...GACTAACATTTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp GACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTGCTCAGGGGCTACATATGGATaGTTCAAGAGGGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: DRNLHHSRSTQFQETWCSGATYG*FKRESP
Trigger: AGGAGACTCCCTCTTGAATCATCCATATGTAGCCCC...TGAGCACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp CTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCCCTGGGCTCTCAGTCTaGATTGATTGGAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LAVCPRAHYQTPLTLGILPGLSV*IDWSWD
Trigger: GTCCCAGCTCCAATCAATGCAGACTGAGAGCCCAGG...GAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp CCGGGGCTACATATGGATGATTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACAATAGGATGGGGACCCTaGACTGGAGACTGCTCTCTA +
Preference number: 4 (lower is better)
Translates to: PGLHMDDSRGSLLARKFTIGWGP*TGDCSL
Trigger: TAGAGAGCAGTCTCCAGTGCAGGGTCCCCATCCTAT...TGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAATCATCCATATGTAGCCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACATGTTTCACTCCTTCTGGCCTTCAGTCTGCATTGATTaGAGCTGGGACCGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: FKRESPRQKVHMFHSFWPSVCID*SWDRSP
Trigger: GGGGCTTCGGTCCCAGCTCCAATCAATGCAGACTGA...AGGCCAGAAGGAGTGAAACATGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GGCCTTCATACCAACCCATTGTTAAAACTGGAAGTCCCTCCACCTGGGGTCACTTTCCTCCTCAGGTGCTaGGGGTATCACAACAGTGCT +
Preference number: 4 (lower is better)
Translates to: GLHTNPLLKLEVPPPGVTFLLRC*GYHNSA
Trigger: AGCACTGTTGTGATACCCCCAGCACCTGAGGAGGAA...AGTGACCCCAGGTGGAGGGACTTCCAGTTTTAACAATGGGTTGGTATGAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp ACAAAGCTGTCAAGCCTAAGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCCTCTGTTCCAGTTTaGCTCTCCTGGACCCCTCTG +
Preference number: 4 (lower is better)
Translates to: TKLSSLRVLTARTAPGTEASVPV*LSWTPL
Trigger: CAGAGGGGTCCAGGAGAGCCAAACTGGAACAGAGGC...TTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCTTAGGCTTGACAGCTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAATGTTAGTCCCAGGGCTTCCTTCCTaGGCCATGGACCCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SRQKHLFLTHSRRWKMLVPGLPS*AMDPSE
Trigger: CTCAGAGGGGTCCATGGCCCAGGAAGGAAGCCCTGG...GACTAACATTTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACATGTTTCACTCCTTCTGGCCTTCAGAGGCTCTAATGTaGGGACTGCCGCCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: FKRESPRQKVHMFHSFWPSEALM*GLPPSS
Trigger: AGAGCTTGGCGGCAGTCCCCACATTAGAGCCTCTGA...AGGCCAGAAGGAGTGAAACATGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CTCCTCAGGGTCCAAGTCCCCATTTATGATGTCCAGGCAGAAACACTTGTTTCTCACCCATATCTCAGCTaGGAAGGGCTTACCGTGGCC +
Preference number: 4 (lower is better)
Translates to: LLRVQVPIYDVQAETLVSHPYLS*EGLTVA
Trigger: GGCCACGGTAAGCCCTTCCCAGCTGAGATATGGGTG...AGAAACAAGTGTTTCTGCCTGGACATCATAAATGGGGACTTGGACCCTGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TGGAACAGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCCTTCTCCGCCTTCTCTaGATCACCTCCCTACCTCAT +
Preference number: 4 (lower is better)
Translates to: WNRSNSRHSEVTSSFSAFLLRLL*ITSLPH
Trigger: ATGAGGTAGGGAGGTGATCCAGAGAAGGCGGAGAAG...GAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCTGTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp AGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCTCTGGAAGCTCGAACAGCACCTaGAACAGAAGCAATAGCCGC +
Preference number: 4 (lower is better)
Translates to: RSNSRHSEVTSSFSAFSGSSNST*NRSNSR
Trigger: GCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCT...TCCAGAGAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TGGAACAGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCAGCTCGAACAGCACCTaGAACAGAAGCAATAGCCGC +
Preference number: 4 (lower is better)
Translates to: WNRSNSRHSEVTSSFSAFSSNST*NRSNSR
Trigger: GCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCT...GAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCTGTTCCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GCTTCCAGCGACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTCCCTAGACAGGGATTaGGAGACATGCAAGTTGCTT +
Preference number: 4 (lower is better)
Translates to: ASSDRNLHHSRSTQFQETSLDRD*ETCKLL
Trigger: AAGCAACTTGCATGTCTCCCAATCCCTGTCTAGGGA...GGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTCGCTGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CTCTGGATCACCTCCCTACCTCATCCTCAATCTAACGCTGGAAATATTGGATATATCAGGACCGGCGGCTaGGGTGAAAGCCTAGCGGTC +
Preference number: 4 (lower is better)
Translates to: LWITSLPHPQSNAGNIGYIRTGG*GESLAV
Trigger: GACCGCTAGGCTTTCACCCCAGCCGCCGGTCCTGAT...ATATCCAATATTTCCAGCGTTAGATTGAGGATGAGGTAGGGAGGTGATCCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CTTGGCTTCCTATTACCTTGTGTTGAAAACACAATAGGCTTTGGGATCAGGAGTGCGGGGAAGGAAGGCTaGCTTAGGAGGGGGCGTCAG +
Preference number: 4 (lower is better)
Translates to: LGFLLPCVENTIGFGIRSAGKEG*LRRGRQ
Trigger: CTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGC...ACTCCTGATCCCAAAGCCTATTGTGTTTTCAACACAAGGTAATAGGAAGCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCTTGAAGTTGAACGGTTaGGGCCAGGCTGCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LAVCPRAHYQTPLTLGILLKLNG*GQAAKE
Trigger: CTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAA...GAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TGGAACAGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCGCACACTGGCATCTCTaGAATTCAGGTGATGGGGCA +
Preference number: 4 (lower is better)
Translates to: WNRSNSRHSEVTSSFSAFAHWHL*NSGDGA
Trigger: TGCCCCATCACCTGAATTCCAGAGATGCCAGTGTGC...GAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCTGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410004.1
CDS-3UTR TCA 90 bp TGGAACAGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCAATAAGCAACGGGGGTaGTGTCCGTCTTTATGCCCA +
Preference number: 4 (lower is better)
Translates to: WNRSNSRHSEVTSSFSAFNKQRG*CPSLCP
Trigger: TGGGCATAAAGACGGACATCACCCCCGTTGCTTATT...GAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCTGTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp AATATTGGATATGGGGTAGGTCACCAAATGTTGCCAGAAGACTCAAATTATGCCGTCCCGTGCATTGCCTaGGGGCCCTGGGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: NIGYGVGHQMLPEDSNYAVPCIA*GPWALS
Trigger: ACTGAGAGCCCAGGGCCCTCAGGCAATGCACGGGAC...GGCATAATTTGAGTCTTCTGGCAACATTTGGTGACCTACCCCATATCCAATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp CTCTGGATCACCTCCCTACCTCATCCTCAATCTAACGCTGGAAATATTGGATATCCCGAAGCCGAAGGTTaGTTGGAGCTCTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LWITSLPHPQSNAGNIGYPEAEG*LELFQG
Trigger: GCCCTGGAAGAGCTCCAATCAACCTTCGGCTTCGGG...ATATCCAATATTTCCAGCGTTAGATTGAGGATGAGGTAGGGAGGTGATCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp ATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAATGTTAGGGCTTACCGTGGCCTaGCTCTCCTCAGGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: MSRQKHLFLTHSRRWKMLGLTVA*LSSGSK
Trigger: CTTGGACCCTGAGGAGAGTCAGGCCACGGTAAGCCC...TAACATTTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp CTTGGCTTCCTATTACCTTGTGTTGAAAACACAATAGGCTTTGGGATCAGGAGTGGGCTTACCGTGGCCTaGCTCTCCTCAGGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: LGFLLPCVENTIGFGIRSGLTVA*LSSGSK
Trigger: CTTGGACCCTGAGGAGAGTCAGGCCACGGTAAGCCC...ACTCCTGATCCCAAAGCCTATTGTGTTTTCAACACAAGGTAATAGGAAGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp CCGGGGCTACATATGGATGATTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACAGGGGCTACATATGGATaGTTCAAGAGGGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PGLHMDDSRGSLLARKFTGATYG*FKRESP
Trigger: AGGAGACTCCCTCTTGAATCATCCATATGTAGCCCC...TGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAATCATCCATATGTAGCCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp CTCTGGATCACCTCCCTACCTCATCCTCAATCTAACGCTGGAAATATTGGATATTCTAGACCCCACATCTaGCAGGGCCCTCCTCTACCC +
Preference number: 4 (lower is better)
Translates to: LWITSLPHPQSNAGNIGYSRPHI*QGPPLP
Trigger: GGGTAGAGGAGGGCCCTGGCAGATGTGGGGTCTAGA...ATATCCAATATTTCCAGCGTTAGATTGAGGATGAGGTAGGGAGGTGATCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359333.8
CDS-3UTR GCA 90 bp CTCCTCAGGGTCCAAGTCCCCATTTATGATGTCCAGGCAGAAACACTTGTTTCTAGTCTCCCCAGTAAGTaGATTGGCACCATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LLRVQVPIYDVQAETLVSSLPSK*IGTMAP
Trigger: AGGGGCCATGGTGCCAATGCACTTACTGGGGAGACT...AGAAACAAGTGTTTCTGCCTGGACATCATAAATGGGGACTTGGACCCTGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp ACAAAGCTGTCAAGCCTAAGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAACCTGGGCTCTCAGTCTaGATTGATTGGAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: TKLSSLRVLTARTAPGTEPGLSV*IDWSWD
Trigger: GTCCCAGCTCCAATCAATGCAGACTGAGAGCCCAGG...TTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCTTAGGCTTGACAGCTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp ACTCAAATTATGCCACCCATATCTCAGCTGGGAAGGGCTTACCGTGGCCTGACTTTGTTCCTCCTCAGGTaGTGGGGGTATCACAACAGT +
Preference number: 4 (lower is better)
Translates to: TQIMPPISQLGRAYRGLTLFLLR*WGYHNS
Trigger: ACTGTTGTGATACCCCCAGCACCTGAGGAGGAACAA...AGTCAGGCCACGGTAAGCCCTTCCCAGCTGAGATATGGGTGGCATAATTTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp CTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCATAGGATGGGGACCCTaGACTGGAGACTGCTCTCTA +
Preference number: 4 (lower is better)
Translates to: LAVCPRAHYQTPLTLGILIGWGP*TGDCSL
Trigger: TAGAGAGCAGTCTCCAGTGCAGGGTCCCCATCCTAT...GAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CAATCTAACGCTGGAAATATTGGATATGGGGTAGGTCACCAAATGTTGCCAGAAAGTGCATTGGCACCATaGCCCCTCCCCAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: QSNAGNIGYGVGHQMLPESALAP*PLPRLP
Trigger: AGGGAGCCTGGGGAGGGGCCATGGTGCCAATGCACT...TTCTGGCAACATTTGGTGACCTACCCCATATCCAATATTTCCAGCGTTAGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359333.8
ENST00000409244.5
CDS-3UTR CCA 90 bp TATTTACTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGATCTTGGGGGCGGCACTaGGATTCTAGTCCCACCACG +
Preference number: 4 (lower is better)
Translates to: YLLAVCPRAHYQTPLTLGSWGRH*DSSPTT
Trigger: CGTGGTGGGACTAGAATCCCAGTGCCGCCCCCAAGA...TCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGTAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAATGTTAGTCTCTTGGGGGCGGCACTaGGATTCTAGTCCCACCACG +
Preference number: 4 (lower is better)
Translates to: SRQKHLFLTHSRRWKMLVSWGRH*DSSPTT
Trigger: CGTGGTGGGACTAGAATCCCAGTGCCGCCCCCAAGA...GACTAACATTTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CTCCTCAGGGTCCAAGTCCCCATTTATGATGTCCAGGCAGAAACACTTGTTTCTCTGGACCCCTCTGGATaGCTAGGTTGTTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LLRVQVPIYDVQAETLVSLDPSG*LGCSSS
Trigger: TGAGGAGGAACAACCTAGCCATCCAGAGGGGTCCAG...AGAAACAAGTGTTTCTGCCTGGACATCATAAATGGGGACTTGGACCCTGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TTTATGATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAACCAGGGCTTCCTTCCTaGGCCATGGACCCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: FMMSRQKHLFLTHSRRWKPGLPS*AMDPSE
Trigger: CTCAGAGGGGTCCATGGCCCAGGAAGGAAGCCCTGG...TTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACATCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAATGTTAGTCGGGAAGGGCTTACCGTaGCCTGACTCTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: SRQKHLFLTHSRRWKMLVGKGLP*PDSPQG
Trigger: ACCCTGAGGAGAGTCAGGCCACGGTAAGCCCTTCCC...GACTAACATTTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCCCCATTTATGATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCCACCCATATCTCAGCTaGGAAGGGCTTACCGTGGCC +
Preference number: 4 (lower is better)
Translates to: SPFMMSRQKHLFLTHSRRHPYLS*EGLTVA
Trigger: GGCCACGGTAAGCCCTTCCCAGCTGAGATATGGGTG...GCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACATCATAAATGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCCTTCTCCGCCTTCTCTGGATCACCTCCCTACCTCATCCTCAATCTAACGCTGTCCCTAGACAGGGATTaGGAGACATGCAAGTTGCTT +
Preference number: 4 (lower is better)
Translates to: SFSAFSGSPPYLILNLTLSLDRD*ETCKLL
Trigger: AAGCAACTTGCATGTCTCCCAATCCCTGTCTAGGGA...CAGCGTTAGATTGAGGATGAGGTAGGGAGGTGATCCAGAGAAGGCGGAGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CTGGAGTTTTGCTTTATTGAAGTTGAACGGTTGGGGCCAGGCTGCGAAGGAGACTGTTTTCAGATAGGATaGGGACCCTGCACTGGAGAC +
Preference number: 4 (lower is better)
Translates to: LEFCFIEVERLGPGCEGDCFQIG*GPCTGD
Trigger: GTCTCCAGTGCAGGGTCCCCATCCTATCTGAAAACA...GTCTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAATAAAGCAAAACTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CAGCAGCTGTCCCTAGACAGGGATTGGGAGACATGCAAGTTGCTTGGCTTCCTACCTGGTGCTCAATATTaGGATCTCAGGAATCAGGAC +
Preference number: 4 (lower is better)
Translates to: QQLSLDRDWETCKLLGFLPGAQY*DLRNQD
Trigger: GTCCTGATTCCTGAGATCCCAATATTGAGCACCAGG...TAGGAAGCCAAGCAACTTGCATGTCTCCCAATCCCTGTCTAGGGACAGCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCCTTCTCCGCCTTCTCTGGATCACCTCCCTACCTCATCCTCAATCTAACGCTGCCTGGTGCTCAATATTaGGATCTCAGGAATCAGGAC +
Preference number: 4 (lower is better)
Translates to: SFSAFSGSPPYLILNLTLPGAQY*DLRNQD
Trigger: GTCCTGATTCCTGAGATCCCAATATTGAGCACCAGG...CAGCGTTAGATTGAGGATGAGGTAGGGAGGTGATCCAGAGAAGGCGGAGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp ATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAATGTTAAGTGCATTGGCACCATaGCCCCTCCCCAGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: MSRQKHLFLTHSRRWKMLSALAP*PLPRLH
Trigger: GTGGAGCCTGGGGAGGGGCCATGGTGCCAATGCACT...TAACATTTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410004.1
CDS-3UTR TCA 90 bp CTCTGTAGACACAATTGGTCGCCCATTCTGTTTATAGGAAGTCTTCCATCCTGCGGATCACCAGCGCTTTaGCTGACTTTGCTCGTCCAG +
Preference number: 4 (lower is better)
Translates to: LCRHNWSPILFIGSLPSCGSPAL*LTLLVQ
Trigger: CTGGACGAGCAAAGTCAGTCAAAGCGCTGGTGATCC...GCAGGATGGAAGACTTCCTATAAACAGAATGGGCGACCAATTGTGTCTACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp CTCTGGATCACCTCCCTACCTCATCCTCAATCTAACGCTGGAAATATTGGATATACTGCCGCCAAGCTCTaGAGATCAGGAGCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: LWITSLPHPQSNAGNIGYTAAKL*RSGAVD
Trigger: GTCCACTGCTCCTGATCTGCAGAGCTTGGCGGCAGT...ATATCCAATATTTCCAGCGTTAGATTGAGGATGAGGTAGGGAGGTGATCCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp TGGAAGTCCCTCCACCTGGGGTCACTGACTCCACTGTTTTCAGATAGGATGGGGAGAAGACTCAAATTATaGCACCCATATCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: WKSLHLGSLTPLFSDRMGRRLKL*HPYLSW
Trigger: CCAGCTGAGATATGGGTGGCATAATTTGAGTCTTCT...CCCCATCCTATCTGAAAACAGTGGAGTCAGTGACCCCAGGTGGAGGGACTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp GACTCTTCGCAAGTGACCCCGGGGCTACATATGGATGATTCAAGAGGGAGTCTCGGGAGACATGCAAGTTaGTTGGCTTCCTATTACCTT +
Preference number: 4 (lower is better)
Translates to: DSSQVTPGLHMDDSRGSLGRHAS*LASYYL
Trigger: AAGGTAATAGGAAGCCAAGCAACTTGCATGTCTCCC...GAGACTCCCTCTTGAATCATCCATATGTAGCCCCGGGGTCACTTGCGAAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp CAGCAGCTGTCCCTAGACAGGGATTGGGAGACATGCAAGTTGCTTGGCTTCCTAGGGAGACATGCAAGTTaGTTGGCTTCCTATTACCTT +
Preference number: 4 (lower is better)
Translates to: QQLSLDRDWETCKLLGFLGRHAS*LASYYL
Trigger: AAGGTAATAGGAAGCCAAGCAACTTGCATGTCTCCC...TAGGAAGCCAAGCAACTTGCATGTCTCCCAATCCCTGTCTAGGGACAGCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp GACTCTTCGCAAGTGACCCCGGGGCTACATATGGATGATTCAAGAGGGAGTCTCTTCCAGGAAACCTGGTaGTCAATATTGGGATCTCAG +
Preference number: 4 (lower is better)
Translates to: DSSQVTPGLHMDDSRGSLFQETW*SILGSQ
Trigger: CTGAGATCCCAATATTGAGCACCAGGTTTCCTGGAA...GAGACTCCCTCTTGAATCATCCATATGTAGCCCCGGGGTCACTTGCGAAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CAATCTAACGCTGGAAATATTGGATATGGGGTAGGTCACCAAATGTTGCCAGAAGTGGCTGGGAGGCGGTaGGCAGGGGAACTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: QSNAGNIGYGVGHQMLPEVAGRR*AGELFS
Trigger: AGAAAAGAGTTCCCCTGCCCACCGCCTCCCAGCCAC...TTCTGGCAACATTTGGTGACCTACCCCATATCCAATATTTCCAGCGTTAGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359333.8
CDS-3UTR CCA 90 bp TCCCCATTTATGATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGCATTGATTGGAGCTaGGACCGAAGCCCCCATTCC +
Preference number: 4 (lower is better)
Translates to: SPFMMSRQKHLFLTHSRRCIDWS*DRSPHS
Trigger: GGAATGGGGGCTTCGGTCCCAGCTCCAATCAATGCA...GCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACATCATAAATGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CTCTGTAGACACAATTGGTCGCCCATTCTGTTTATAGGAAGTCTTCCATCCTGCTGCATTGATTGGAGCTaGGACCGAAGCCCCCATTCC +
Preference number: 4 (lower is better)
Translates to: LCRHNWSPILFIGSLPSCCIDWS*DRSPHS
Trigger: GGAATGGGGGCTTCGGTCCCAGCTCCAATCAATGCA...GCAGGATGGAAGACTTCCTATAAACAGAATGGGCGACCAATTGTGTCTACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TATTTACTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAGGTTGGTCCAACTCTTaGGGGCGGCACTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: YLLAVCPRAHYQTPLTLGGWSNS*GRHWDS
Trigger: AGAATCCCAGTGCCGCCCCCAAGAGTTGGACCAACC...TCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGTAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CTCTGGATCACCTCCCTACCTCATCCTCAATCTAACGCTGGAAATATTGGATATGGTTGGTCCAACTCTTaGGGGCGGCACTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: LWITSLPHPQSNAGNIGYGWSNS*GRHWDS
Trigger: AGAATCCCAGTGCCGCCCCCAAGAGTTGGACCAACC...ATATCCAATATTTCCAGCGTTAGATTGAGGATGAGGTAGGGAGGTGATCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TATTTACTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAGCCTCTGTTCCAGTTTaGCTCTCCTGGACCCCTCTG +
Preference number: 4 (lower is better)
Translates to: YLLAVCPRAHYQTPLTLGASVPV*LSWTPL
Trigger: CAGAGGGGTCCAGGAGAGCCAAACTGGAACAGAGGC...TCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGTAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TATTTACTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGATTCCTTCCTGGGCCATaGACCCCTCTGAGGCCATTC +
Preference number: 4 (lower is better)
Translates to: YLLAVCPRAHYQTPLTLGFLPGP*TPLRPF
Trigger: GAATGGCCTCAGAGGGGTCCATGGCCCAGGAAGGAA...TCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGTAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TGGAAGTCCCTCCACCTGGGGTCACTGACTCCACTGTTTTCAGATAGGATGGGGAGAGAAGAGAAATCTTaGGAGAGTCATTTAAGGGGG +
Preference number: 4 (lower is better)
Translates to: WKSLHLGSLTPLFSDRMGREEKS*ESHLRG
Trigger: CCCCCTTAAATGACTCTCCCAAGATTTCTCTTCTCT...CCCCATCCTATCTGAAAACAGTGGAGTCAGTGACCCCAGGTGGAGGGACTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCATTTTTCACCCATATCTCAGCTaGGAAGGGCTTACCGTGGCC +
Preference number: 4 (lower is better)
Translates to: VCPRAHYQTPLTLGILIFHPYLS*EGLTVA
Trigger: GGCCACGGTAAGCCCTTCCCAGCTGAGATATGGGTG...AAAAATGAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAATGTTAGTCCACCCATATCTCAGCTaGGAAGGGCTTACCGTGGCC +
Preference number: 4 (lower is better)
Translates to: SRQKHLFLTHSRRWKMLVHPYLS*EGLTVA
Trigger: GGCCACGGTAAGCCCTTCCCAGCTGAGATATGGGTG...GACTAACATTTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TATTTACTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGACACCCATATCTCAGCTaGGAAGGGCTTACCGTGGCC +
Preference number: 4 (lower is better)
Translates to: YLLAVCPRAHYQTPLTLGHPYLS*EGLTVA
Trigger: GGCCACGGTAAGCCCTTCCCAGCTGAGATATGGGTG...TCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGTAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp ACAAAGCTGTCAAGCCTAAGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAAGCTCGAACAGCACCTaGAACAGAAGCAATAGCCGC +
Preference number: 4 (lower is better)
Translates to: TKLSSLRVLTARTAPGTESSNST*NRSNSR
Trigger: GCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCT...TTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCTTAGGCTTGACAGCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCTGTTTTCAGATAGGATaGGGACCCTGCACTGGAGAC +
Preference number: 4 (lower is better)
Translates to: LAVCPRAHYQTPLTLGILCFQIG*GPCTGD
Trigger: GTCTCCAGTGCAGGGTCCCCATCCTATCTGAAAACA...GAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CTCCTCAGGGTCCAAGTCCCCATTTATGATGTCCAGGCAGAAACACTTGTTTCTCCCCGGGGCTACATATaGATGATTCAAGAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: LLRVQVPIYDVQAETLVSPRGYI*MIQEGV
Trigger: GACTCCCTCTTGAATCATCCATATGTAGCCCCGGGG...AGAAACAAGTGTTTCTGCCTGGACATCATAAATGGGGACTTGGACCCTGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CGTCAGCTATGGTTTAGCAGCTTCCAGCGACCGAAACCTACATCACAGCCGCAGCAATTCCAGGAAACCTaGTGCTCAATATTGGGATCT +
Preference number: 4 (lower is better)
Translates to: RQLWFSSFQRPKPTSQPQQFQET*CSILGS
Trigger: AGATCCCAATATTGAGCACCAGGTTTCCTGGAATTG...CTGCGGCTGTGATGTAGGTTTCGGTCGCTGGAAGCTGCTAAACCATAGCTGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp CCGGGGCTACATATGGATGATTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACAAGAAGCCACCCAATGTaGGAAAGAAATAAGCAACGG +
Preference number: 4 (lower is better)
Translates to: PGLHMDDSRGSLLARKFTRSHPM*ERNKQR
Trigger: CCGTTGCTTATTTCTTTCTCACATTGGGTGGCTTCT...TGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAATCATCCATATGTAGCCCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp TGGAACAGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCAGAAGCCACCCAATGTaGGAAAGAAATAAGCAACGG +
Preference number: 4 (lower is better)
Translates to: WNRSNSRHSEVTSSFSAFRSHPM*ERNKQR
Trigger: CCGTTGCTTATTTCTTTCTCACATTGGGTGGCTTCT...GAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCTGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp ACTCAAATTATGCCACCCATATCTCAGCTGGGAAGGGCTTACCGTGGCCTGACTAGAAGCCACCCAATGTaGGAAAGAAATAAGCAACGG +
Preference number: 4 (lower is better)
Translates to: TQIMPPISQLGRAYRGLTRSHPM*ERNKQR
Trigger: CCGTTGCTTATTTCTTTCTCACATTGGGTGGCTTCT...AGTCAGGCCACGGTAAGCCCTTCCCAGCTGAGATATGGGTGGCATAATTTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp TTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACATGTTTCACTCCTTCTGGCCTCCAAGTCCCCATTTATaGTGTCCAGGCAGAAACACT +
Preference number: 4 (lower is better)
Translates to: FKRESPRQKVHMFHSFWPPSPHL*CPGRNT
Trigger: AGTGTTTCTGCCTGGACATCATAAATGGGGACTTGG...AGGCCAGAAGGAGTGAAACATGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp GTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCATTTTTAGTCTCCCCAGTAAGTaGATTGGCACCATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: VCPRAHYQTPLTLGILIFSLPSK*IGTMAP
Trigger: AGGGGCCATGGTGCCAATGCACTTACTGGGGAGACT...AAAAATGAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp GACTCTTCGCAAGTGACCCCGGGGCTACATATGGATGATTCAAGAGGGAGTCTCAGAAGACTCAAATTATaGCACCCATATCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: DSSQVTPGLHMDDSRGSLRRLKL*HPYLSW
Trigger: CCAGCTGAGATATGGGTGGCATAATTTGAGTCTTCT...GAGACTCCCTCTTGAATCATCCATATGTAGCCCCGGGGTCACTTGCGAAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp CTGGAGTTTTGCTTTATTGAAGTTGAACGGTTGGGGCCAGGCTGCGAAGGAGACTTCCAGGAAACCTGGTaGTCAATATTGGGATCTCAG +
Preference number: 4 (lower is better)
Translates to: LEFCFIEVERLGPGCEGDFQETW*SILGSQ
Trigger: CTGAGATCCCAATATTGAGCACCAGGTTTCCTGGAA...GTCTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAATAAAGCAAAACTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAATGTTAGTCTGCATTGATTGGAGCTaGGACCGAAGCCCCCATTCC +
Preference number: 4 (lower is better)
Translates to: SRQKHLFLTHSRRWKMLVCIDWS*DRSPHS
Trigger: GGAATGGGGGCTTCGGTCCCAGCTCCAATCAATGCA...GACTAACATTTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TTTACTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCTGGACCCCTCTGGATaGCTAGGTTGTTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: FTSSVPSCTLSNSSDSWNLDPSG*LGCSSS
Trigger: TGAGGAGGAACAACCTAGCCATCCAGAGGGGTCCAG...ATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CTTGGCTTCCTATTACCTTGTGTTGAAAACACAATAGGCTTTGGGATCAGGAGTGCCTCTGTTCCAGTTTaGCTCTCCTGGACCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LGFLLPCVENTIGFGIRSASVPV*LSWTPL
Trigger: CAGAGGGGTCCAGGAGAGCCAAACTGGAACAGAGGC...ACTCCTGATCCCAAAGCCTATTGTGTTTTCAACACAAGGTAATAGGAAGCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp ATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAATGTTATTCCTTCCTGGGCCATaGACCCCTCTGAGGCCATTC +
Preference number: 4 (lower is better)
Translates to: MSRQKHLFLTHSRRWKMLFLPGP*TPLRPF
Trigger: GAATGGCCTCAGAGGGGTCCATGGCCCAGGAAGGAA...TAACATTTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CTCTGTAGACACAATTGGTCGCCCATTCTGTTTATAGGAAGTCTTCCATCCTGCAAGCCGAAGGTTGATTaGAGCTCTTCCAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LCRHNWSPILFIGSLPSCKPKVD*SSSRAS
Trigger: GGAAGCCCTGGAAGAGCTCCAATCAACCTTCGGCTT...GCAGGATGGAAGACTTCCTATAAACAGAATGGGCGACCAATTGTGTCTACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTGCTCAAGAGAAGAGAAATCTTaGGAGAGTCATTTAAGGGGG +
Preference number: 4 (lower is better)
Translates to: DRNLHHSRSTQFQETWCSREEKS*ESHLRG
Trigger: CCCCCTTAAATGACTCTCCCAAGATTTCTCTTCTCT...TGAGCACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCCTTCTCCGCCTTCTCTGGATCACCTCCCTACCTCATCCTCAATCTAACGCTGCAAATGAACGAGGTCTaGTGTGGAGAGAAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: SFSAFSGSPPYLILNLTLQMNEV*CGEKRN
Trigger: ATTTCTCTTCTCTCCACACCAGACCTCGTTCATTTG...CAGCGTTAGATTGAGGATGAGGTAGGGAGGTGATCCAGAGAAGGCGGAGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TATTTACTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAAGGGGGCGTCAGCTATaGTTTAGCAGCTTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: YLLAVCPRAHYQTPLTLGRGRQL*FSSFQR
Trigger: TCGCTGGAAGCTGCTAAACCATAGCTGACGCCCCCT...TCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGTAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp TCCCCATTTATGATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCAATAAGCAACGGGGGTaGTGTCCGTCTTTATGCCCA +
Preference number: 4 (lower is better)
Translates to: SPFMMSRQKHLFLTHSRRNKQRG*CPSLCP
Trigger: TGGGCATAAAGACGGACATCACCCCCGTTGCTTATT...GCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACATCATAAATGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp GCTGTCAAGCCTAAGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGAAGCCACCCAATGTaGGAAAGAAATAAGCAACGG +
Preference number: 4 (lower is better)
Translates to: AVKPKGSNSSNSTWNRSNRSHPM*ERNKQR
Trigger: CCGTTGCTTATTTCTTTCTCACATTGGGTGGCTTCT...ATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCTTAGGCTTGACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp ATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAATGTTAGCTCTCAGTCTGCATTaGTTGGAGCTGGGACCGAAG +
Preference number: 4 (lower is better)
Translates to: MSRQKHLFLTHSRRWKMLALSLH*LELGPK
Trigger: CTTCGGTCCCAGCTCCAATCAATGCAGACTGAGAGC...TAACATTTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp CCGGGGCTACATATGGATGATTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACAAAAATGTTAGTCAAATaGACGAGGTCTGGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: PGLHMDDSRGSLLARKFTKMLVK*TRSGVE
Trigger: CTCCACACCAGACCTCGTTCATTTGACTAACATTTT...TGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAATCATCCATATGTAGCCCCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp CTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCAGAAACACTTGTTTCTaGCACATAGTAGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: LAVCPRAHYQTPLTLGILRNTCF*HIVGAG
Trigger: TCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCT...GAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp AATATTGGATATGGGGTAGGTCACCAAATGTTGCCAGAAGACTCAAATTATGCCGAGACTCTTCGCAAGTaGCCCCGGGGCTACATATGG +
Preference number: 4 (lower is better)
Translates to: NIGYGVGHQMLPEDSNYAETLRK*PRGYIW
Trigger: CCATATGTAGCCCCGGGGTCACTTGCGAAGAGTCTC...GGCATAATTTGAGTCTTCTGGCAACATTTGGTGACCTACCCCATATCCAATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp TCCTTCTCCGCCTTCTCTGGATCACCTCCCTACCTCATCCTCAATCTAACGCTGTTGTGTAGAATCAATTaGTTGGACCCACATACACGA +
Preference number: 4 (lower is better)
Translates to: SFSAFSGSPPYLILNLTLLCRIN*LDPHTR
Trigger: TCGTGTATGTGGGTCCAATCAATTGATTCTACACAA...CAGCGTTAGATTGAGGATGAGGTAGGGAGGTGATCCAGAGAAGGCGGAGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409102.5
CDS-3UTR GCA 90 bp GACTCTTCGCAAGTGACCCCGGGGCTACATATGGATGATTCAAGAGGGAGTCTCTTGTTAAACTCAGTTTaGAAATTTCCTGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: DSSQVTPGLHMDDSRGSLLLNSV*KFPARR
Trigger: CCTCCTGGCAGGAAATTTGCAAACTGAGTTTAACAA...GAGACTCCCTCTTGAATCATCCATATGTAGCCCCGGGGTCACTTGCGAAGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359333.8
CDS-3UTR GCA 90 bp TTTATGATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAACCTGGGCTCTCAGTCTaGATTGATTGGAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: FMMSRQKHLFLTHSRRWKPGLSV*IDWSWD
Trigger: GTCCCAGCTCCAATCAATGCAGACTGAGAGCCCAGG...TTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACATCATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp TCCCCATTTATGATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTTGTTCCTCCTCAGGTaGTGGGGGTATCACAACAGT +
Preference number: 4 (lower is better)
Translates to: SPFMMSRQKHLFLTHSRRLFLLR*WGYHNS
Trigger: ACTGTTGTGATACCCCCAGCACCTGAGGAGGAACAA...GCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACATCATAAATGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp CAGCAGCTGTCCCTAGACAGGGATTGGGAGACATGCAAGTTGCTTGGCTTCCTATATTTACTAGCAGTGTaGCCTCGTGCACATTATCAA +
Preference number: 4 (lower is better)
Translates to: QQLSLDRDWETCKLLGFLYLLAV*PRAHYQ
Trigger: TTGATAATGTGCACGAGGGCACACTGCTAGTAAATA...TAGGAAGCCAAGCAACTTGCATGTCTCCCAATCCCTGTCTAGGGACAGCTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp GGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGCCGCCACTCAGAGTATTTACTAGCAGTGTaGCCTCGTGCACATTATCAA +
Preference number: 4 (lower is better)
Translates to: GSNSSNSTWNRSNSRHSEYLLAV*PRAHYQ
Trigger: TTGATAATGTGCACGAGGGCACACTGCTAGTAAATA...CTCTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp CAATCTAACGCTGGAAATATTGGATATGGGGTAGGTCACCAAATGTTGCCAGAATGCCTGGGGCTTCAGTaGACACTGGCATCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: QSNAGNIGYGVGHQMLPECLGLQ*TLASLE
Trigger: TTCCAGAGATGCCAGTGTGCACTGAAGCCCCAGGCA...TTCTGGCAACATTTGGTGACCTACCCCATATCCAATATTTCCAGCGTTAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410004.1
CDS-3UTR CCA 90 bp AATATTGGATATGGGGTAGGTCACCAAATGTTGCCAGAAGACTCAAATTATGCCGGTTGGTCCAACTCTTaGGGGCGGCACTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: NIGYGVGHQMLPEDSNYAGWSNS*GRHWDS
Trigger: AGAATCCCAGTGCCGCCCCCAAGAGTTGGACCAACC...GGCATAATTTGAGTCTTCTGGCAACATTTGGTGACCTACCCCATATCCAATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAATGTTAGTCTTCCTCCTCAGGTGCTaGGGGTATCACAACAGTGCT +
Preference number: 4 (lower is better)
Translates to: SRQKHLFLTHSRRWKMLVFLLRC*GYHNSA
Trigger: AGCACTGTTGTGATACCCCCAGCACCTGAGGAGGAA...GACTAACATTTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TTTACTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATTTCCTCCTCAGGTGCTaGGGGTATCACAACAGTGCT +
Preference number: 4 (lower is better)
Translates to: FTSSVPSCTLSNSSDSWNFLLRC*GYHNSA
Trigger: AGCACTGTTGTGATACCCCCAGCACCTGAGGAGGAA...ATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CAATCTAACGCTGGAAATATTGGATATGGGGTAGGTCACCAAATGTTGCCAGAACTGGACCCCTCTGGATaGCTAGGTTGTTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: QSNAGNIGYGVGHQMLPELDPSG*LGCSSS
Trigger: TGAGGAGGAACAACCTAGCCATCCAGAGGGGTCCAG...TTCTGGCAACATTTGGTGACCTACCCCATATCCAATATTTCCAGCGTTAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp ATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAATGTTATCTCCTGGACCCCTCTaGATGGCTAGGTTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: MSRQKHLFLTHSRRWKMLSPGPL*MARLFL
Trigger: GAGGAACAACCTAGCCATCCAGAGGGGTCCAGGAGA...TAACATTTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TTTACTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATAAGCCGAAGGTTGATTaGAGCTCTTCCAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: FTSSVPSCTLSNSSDSWNKPKVD*SSSRAS
Trigger: GGAAGCCCTGGAAGAGCTCCAATCAACCTTCGGCTT...ATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCTGACTCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTGCAGATCAGGAGCAGTaGACACAGCCCGTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: SDSWNPHFSIITHKAVKPADQEQ*TQPVVP
Trigger: GGGGACCACGGGCTGTGTCCACTGCTCCTGATCTGC...AGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGAGTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TTTATGATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAATCAGAGGCTCTAATGTaGGGACTGCCGCCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: FMMSRQKHLFLTHSRRWKSEALM*GLPPSS
Trigger: AGAGCTTGGCGGCAGTCCCCACATTAGAGCCTCTGA...TTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACATCATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CAATCTAACGCTGGAAATATTGGATATGGGGTAGGTCACCAAATGTTGCCAGAATCAGAGGCTCTAATGTaGGGACTGCCGCCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: QSNAGNIGYGVGHQMLPESEALM*GLPPSS
Trigger: AGAGCTTGGCGGCAGTCCCCACATTAGAGCCTCTGA...TTCTGGCAACATTTGGTGACCTACCCCATATCCAATATTTCCAGCGTTAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TGGAACAGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCCAAATGAACGAGGTCTaGTGTGGAGAGAAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: WNRSNSRHSEVTSSFSAFQMNEV*CGEKRN
Trigger: ATTTCTCTTCTCTCCACACCAGACCTCGTTCATTTG...GAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCTGTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAATGTTAGTCCTTCTCCGCCTTCTCTaGATCACCTCCCTACCTCAT +
Preference number: 4 (lower is better)
Translates to: SRQKHLFLTHSRRWKMLVLLRLL*ITSLPH
Trigger: ATGAGGTAGGGAGGTGATCCAGAGAAGGCGGAGAAG...GACTAACATTTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CTTGGCTTCCTATTACCTTGTGTTGAAAACACAATAGGCTTTGGGATCAGGAGTTTGAAGTTGAACGGTTaGGGCCAGGCTGCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LGFLLPCVENTIGFGIRSLKLNG*GQAAKE
Trigger: CTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAA...ACTCCTGATCCCAAAGCCTATTGTGTTTTCAACACAAGGTAATAGGAAGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp AATATTGGATATGGGGTAGGTCACCAAATGTTGCCAGAAGACTCAAATTATGCCGCTCTCAGTCTGCATTaGTTGGAGCTGGGACCGAAG +
Preference number: 4 (lower is better)
Translates to: NIGYGVGHQMLPEDSNYAALSLH*LELGPK
Trigger: CTTCGGTCCCAGCTCCAATCAATGCAGACTGAGAGC...GGCATAATTTGAGTCTTCTGGCAACATTTGGTGACCTACCCCATATCCAATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp TCCCCATTTATGATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCCCAAGTCCCCATTTATaGTGTCCAGGCAGAAACACT +
Preference number: 4 (lower is better)
Translates to: SPFMMSRQKHLFLTHSRRPSPHL*CPGRNT
Trigger: AGTGTTTCTGCCTGGACATCATAAATGGGGACTTGG...GCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACATCATAAATGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp CTCTGTAGACACAATTGGTCGCCCATTCTGTTTATAGGAAGTCTTCCATCCTGCCCAAGTCCCCATTTATaGTGTCCAGGCAGAAACACT +
Preference number: 4 (lower is better)
Translates to: LCRHNWSPILFIGSLPSCPSPHL*CPGRNT
Trigger: AGTGTTTCTGCCTGGACATCATAAATGGGGACTTGG...GCAGGATGGAAGACTTCCTATAAACAGAATGGGCGACCAATTGTGTCTACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp AGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGCCGCCACTCAGATTATCAAACTCCTCTaGCTCTTGGAATCCTCATTT +
Preference number: 4 (lower is better)
Translates to: RVLTARTAPGTEAIAATQIIKLL*LLESSF
Trigger: AAATGAGGATTCCAAGAGTCAGAGGAGTTTGATAAT...CTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp TTTACTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATTCCACCTGGGGTCACTaGCTCCACTGTTTTCAGATA +
Preference number: 4 (lower is better)
Translates to: FTSSVPSCTLSNSSDSWNSTWGH*LHCFQI
Trigger: TATCTGAAAACAGTGGAGTCAGTGACCCCAGGTGGA...ATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp CTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCAGAAGACTCAAATTATaGCACCCATATCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LAVCPRAHYQTPLTLGILRRLKL*HPYLSW
Trigger: CCAGCTGAGATATGGGTGGCATAATTTGAGTCTTCT...GAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp AATATTGGATATGGGGTAGGTCACCAAATGTTGCCAGAAGACTCAAATTATGCCTCAGTCTGCATTGATTaGAGCTGGGACCGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: NIGYGVGHQMLPEDSNYASVCID*SWDRSP
Trigger: GGGGCTTCGGTCCCAGCTCCAATCAATGCAGACTGA...GGCATAATTTGAGTCTTCTGGCAACATTTGGTGACCTACCCCATATCCAATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTAAGGGTTCTTGGGGGCGGCACTaGGATTCTAGTCCCACCACG +
Preference number: 4 (lower is better)
Translates to: SWNPHFSIITHKAVKPKGSWGRH*DSSPTT
Trigger: CGTGGTGGGACTAGAATCCCAGTGCCGCCCCCAAGA...ACCCTTAGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCTGACTCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTTCTTGGGGGCGGCACTaGGATTCTAGTCCCACCACG +
Preference number: 4 (lower is better)
Translates to: SDSWNPHFSIITHKAVKPSWGRH*DSSPTT
Trigger: CGTGGTGGGACTAGAATCCCAGTGCCGCCCCCAAGA...AGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGAGTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CGTCAGCTATGGTTTAGCAGCTTCCAGCGACCGAAACCTACATCACAGCCGCAGAACTCCTCTGACTCTTaGAATCCTCATTTTTCAATA +
Preference number: 4 (lower is better)
Translates to: RQLWFSSFQRPKPTSQPQNSSDS*NPHFSI
Trigger: TATTGAAAAATGAGGATTCCAAGAGTCAGAGGAGTT...CTGCGGCTGTGATGTAGGTTTCGGTCGCTGGAAGCTGCTAAACCATAGCTGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CTGGAGTTTTGCTTTATTGAAGTTGAACGGTTGGGGCCAGGCTGCGAAGGAGACAAACACAATAGGCTTTaGGATCAGGAGTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: LEFCFIEVERLGPGCEGDKHNRL*DQEFIP
Trigger: TGGAATGAACTCCTGATCCCAAAGCCTATTGTGTTT...GTCTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAATAAAGCAAAACTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp GCTGTCAAGCCTAAGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATGACATGCAAGTTGCTTaGCTTCCTATTACCTTGTGT +
Preference number: 4 (lower is better)
Translates to: AVKPKGSNSSNSTWNRSNDMQVA*LPITLC
Trigger: ACACAAGGTAATAGGAAGCCAAGCAACTTGCATGTC...ATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCTTAGGCTTGACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCTGACTCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTAGTGCATTGGCACCATaGCCCCTCCCCAGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: SDSWNPHFSIITHKAVKPSALAP*PLPRLL
Trigger: AAGGAGCCTGGGGAGGGGCCATGGTGCCAATGCACT...AGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGAGTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409102.5
CDS-3UTR TCA 90 bp ACAAAGCTGTCAAGCCTAAGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAAAAATGTTAGTCAAATaGACGAGGTCTGGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: TKLSSLRVLTARTAPGTEKMLVK*TRSGVE
Trigger: CTCCACACCAGACCTCGTTCATTTGACTAACATTTT...TTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCTTAGGCTTGACAGCTTTGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp TCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAATGTTAGTCCCAAGTCCCCATTTATaGTGTCCAGGCAGAAACACT +
Preference number: 4 (lower is better)
Translates to: SRQKHLFLTHSRRWKMLVPSPHL*CPGRNT
Trigger: AGTGTTTCTGCCTGGACATCATAAATGGGGACTTGG...GACTAACATTTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp TGGAACAGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCATTATCAAACTCCTCTaGCTCTTGGAATCCTCATTT +
Preference number: 4 (lower is better)
Translates to: WNRSNSRHSEVTSSFSAFIIKLL*LLESSF
Trigger: AAATGAGGATTCCAAGAGTCAGAGGAGTTTGATAAT...GAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCTGTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp ATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAATGTTATTGTTCCTCCTCAGGTaGTGGGGGTATCACAACAGT +
Preference number: 4 (lower is better)
Translates to: MSRQKHLFLTHSRRWKMLLFLLR*WGYHNS
Trigger: ACTGTTGTGATACCCCCAGCACCTGAGGAGGAACAA...TAACATTTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp TTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACATGTTTCACTCCTTCTGGCCTTATTTACTAGCAGTGTaGCCTCGTGCACATTATCAA +
Preference number: 4 (lower is better)
Translates to: FKRESPRQKVHMFHSFWPYLLAV*PRAHYQ
Trigger: TTGATAATGTGCACGAGGGCACACTGCTAGTAAATA...AGGCCAGAAGGAGTGAAACATGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTAAGGGTGCCTCTGTTCCAGTTTaGCTCTCCTGGACCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SWNPHFSIITHKAVKPKGASVPV*LSWTPL
Trigger: CAGAGGGGTCCAGGAGAGCCAAACTGGAACAGAGGC...ACCCTTAGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CTCCTCAGGGTCCAAGTCCCCATTTATGATGTCCAGGCAGAAACACTTGTTTCTAGAGAAGAGAAATCTTaGGAGAGTCATTTAAGGGGG +
Preference number: 4 (lower is better)
Translates to: LLRVQVPIYDVQAETLVSREEKS*ESHLRG
Trigger: CCCCCTTAAATGACTCTCCCAAGATTTCTCTTCTCT...AGAAACAAGTGTTTCTGCCTGGACATCATAAATGGGGACTTGGACCCTGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp AGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGCCGCCACTCAGAACTCCTCTGACTCTTaGAATCCTCATTTTTCAATA +
Preference number: 4 (lower is better)
Translates to: RVLTARTAPGTEAIAATQNSSDS*NPHFSI
Trigger: TATTGAAAAATGAGGATTCCAAGAGTCAGAGGAGTT...CTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp TTTACTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATAGAAACACTTGTTTCTaGCACATAGTAGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: FTSSVPSCTLSNSSDSWNRNTCF*HIVGAG
Trigger: TCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCT...ATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp ATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAATGTTACCAAGTCCCCATTTATaGTGTCCAGGCAGAAACACT +
Preference number: 4 (lower is better)
Translates to: MSRQKHLFLTHSRRWKMLPSPHL*CPGRNT
Trigger: AGTGTTTCTGCCTGGACATCATAAATGGGGACTTGG...TAACATTTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp TCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTAAGGGTAGTCTCCCCAGTAAGTaGATTGGCACCATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SWNPHFSIITHKAVKPKGSLPSK*IGTMAP
Trigger: AGGGGCCATGGTGCCAATGCACTTACTGGGGAGACT...ACCCTTAGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp TCTGACTCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTCCTGGGCTCTCAGTCTaGATTGATTGGAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SDSWNPHFSIITHKAVKPPGLSV*IDWSWD
Trigger: GTCCCAGCTCCAATCAATGCAGACTGAGAGCCCAGG...AGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGAGTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp TCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAATGTTAGTCTTCCAGGAAACCTGGTaGTCAATATTGGGATCTCAG +
Preference number: 4 (lower is better)
Translates to: SRQKHLFLTHSRRWKMLVFQETW*SILGSQ
Trigger: CTGAGATCCCAATATTGAGCACCAGGTTTCCTGGAA...GACTAACATTTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCTGACTCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTTGCATTGATTGGAGCTaGGACCGAAGCCCCCATTCC +
Preference number: 4 (lower is better)
Translates to: SDSWNPHFSIITHKAVKPCIDWS*DRSPHS
Trigger: GGAATGGGGGCTTCGGTCCCAGCTCCAATCAATGCA...AGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGAGTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CCGGGGCTACATATGGATGATTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACAAACTCCTCTGACTCTTaGAATCCTCATTTTTCAATA +
Preference number: 4 (lower is better)
Translates to: PGLHMDDSRGSLLARKFTNSSDS*NPHFSI
Trigger: TATTGAAAAATGAGGATTCCAAGAGTCAGAGGAGTT...TGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAATCATCCATATGTAGCCCCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp TTTACTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATAAAATGTTAGTCAAATaGACGAGGTCTGGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: FTSSVPSCTLSNSSDSWNKMLVK*TRSGVE
Trigger: CTCCACACCAGACCTCGTTCATTTGACTAACATTTT...ATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp ACAAAGCTGTCAAGCCTAAGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAATTATCAAACTCCTCTaGCTCTTGGAATCCTCATTT +
Preference number: 4 (lower is better)
Translates to: TKLSSLRVLTARTAPGTEIIKLL*LLESSF
Trigger: AAATGAGGATTCCAAGAGTCAGAGGAGTTTGATAAT...TTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCTTAGGCTTGACAGCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp CTCTGGATCACCTCCCTACCTCATCCTCAATCTAACGCTGGAAATATTGGATATCCACAGGGACACAACTaGTTGAGAAACAATTGTACA +
Preference number: 4 (lower is better)
Translates to: LWITSLPHPQSNAGNIGYPQGHN*LRNNCT
Trigger: TGTACAATTGTTTCTCAAGCAGTTGTGTCCCTGTGG...ATATCCAATATTTCCAGCGTTAGATTGAGGATGAGGTAGGGAGGTGATCCAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359333.8
CDS-3UTR GCA 90 bp TCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAATGTTAGTCAGAAGACTCAAATTATaGCACCCATATCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SRQKHLFLTHSRRWKMLVRRLKL*HPYLSW
Trigger: CCAGCTGAGATATGGGTGGCATAATTTGAGTCTTCT...GACTAACATTTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCTGACTCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTTTCCTCCTCAGGTGCTaGGGGTATCACAACAGTGCT +
Preference number: 4 (lower is better)
Translates to: SDSWNPHFSIITHKAVKPFLLRC*GYHNSA
Trigger: AGCACTGTTGTGATACCCCCAGCACCTGAGGAGGAA...AGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGAGTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCTGACTCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTAAGCCGAAGGTTGATTaGAGCTCTTCCAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SDSWNPHFSIITHKAVKPKPKVD*SSSRAS
Trigger: GGAAGCCCTGGAAGAGCTCCAATCAACCTTCGGCTT...AGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGAGTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAATGTTAGTCCAAATGAACGAGGTCTaGTGTGGAGAGAAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: SRQKHLFLTHSRRWKMLVQMNEV*CGEKRN
Trigger: ATTTCTCTTCTCTCCACACCAGACCTCGTTCATTTG...GACTAACATTTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCTGACTCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTCTTCTCCGCCTTCTCTaGATCACCTCCCTACCTCAT +
Preference number: 4 (lower is better)
Translates to: SDSWNPHFSIITHKAVKPLLRLL*ITSLPH
Trigger: ATGAGGTAGGGAGGTGATCCAGAGAAGGCGGAGAAG...AGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGAGTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TTTACTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATGACATGCAAGTTGCTTaGCTTCCTATTACCTTGTGT +
Preference number: 4 (lower is better)
Translates to: FTSSVPSCTLSNSSDSWNDMQVA*LPITLC
Trigger: ACACAAGGTAATAGGAAGCCAAGCAACTTGCATGTC...ATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TATTTACTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGACAATTCCAGGAAACCTaGTGCTCAATATTGGGATCT +
Preference number: 4 (lower is better)
Translates to: YLLAVCPRAHYQTPLTLGQFQET*CSILGS
Trigger: AGATCCCAATATTGAGCACCAGGTTTCCTGGAATTG...TCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp TCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTAAGGGTAATAAGCAACGGGGGTaGTGTCCGTCTTTATGCCCA +
Preference number: 4 (lower is better)
Translates to: SWNPHFSIITHKAVKPKGNKQRG*CPSLCP
Trigger: TGGGCATAAAGACGGACATCACCCCCGTTGCTTATT...ACCCTTAGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp AATATTGGATATGGGGTAGGTCACCAAATGTTGCCAGAAGACTCAAATTATGCCAGAAACACTTGTTTCTaGCACATAGTAGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: NIGYGVGHQMLPEDSNYARNTCF*HIVGAG
Trigger: TCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCT...GGCATAATTTGAGTCTTCTGGCAACATTTGGTGACCTACCCCATATCCAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp TCCCCATTTATGATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCATTATCAAACTCCTCTaGCTCTTGGAATCCTCATTT +
Preference number: 4 (lower is better)
Translates to: SPFMMSRQKHLFLTHSRRIIKLL*LLESSF
Trigger: AAATGAGGATTCCAAGAGTCAGAGGAGTTTGATAAT...GCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACATCATAAATGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp ATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAATGTTAAGAAGACTCAAATTATaGCACCCATATCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: MSRQKHLFLTHSRRWKMLRRLKL*HPYLSW
Trigger: CCAGCTGAGATATGGGTGGCATAATTTGAGTCTTCT...TAACATTTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CAATCTAACGCTGGAAATATTGGATATGGGGTAGGTCACCAAATGTTGCCAGAACAAATGAACGAGGTCTaGTGTGGAGAGAAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: QSNAGNIGYGVGHQMLPEQMNEV*CGEKRN
Trigger: ATTTCTCTTCTCTCCACACCAGACCTCGTTCATTTG...TTCTGGCAACATTTGGTGACCTACCCCATATCCAATATTTCCAGCGTTAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TTTATGATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAGACATGCAAGTTGCTTaGCTTCCTATTACCTTGTGT +
Preference number: 4 (lower is better)
Translates to: FMMSRQKHLFLTHSRRWKDMQVA*LPITLC
Trigger: ACACAAGGTAATAGGAAGCCAAGCAACTTGCATGTC...TTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACATCATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp AATATTGGATATGGGGTAGGTCACCAAATGTTGCCAGAAGACTCAAATTATGCCAAAATGTTAGTCAAATaGACGAGGTCTGGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: NIGYGVGHQMLPEDSNYAKMLVK*TRSGVE
Trigger: CTCCACACCAGACCTCGTTCATTTGACTAACATTTT...GGCATAATTTGAGTCTTCTGGCAACATTTGGTGACCTACCCCATATCCAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp TCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAATGTTAGTCATTATCAAACTCCTCTaGCTCTTGGAATCCTCATTT +
Preference number: 4 (lower is better)
Translates to: SRQKHLFLTHSRRWKMLVIIKLL*LLESSF
Trigger: AAATGAGGATTCCAAGAGTCAGAGGAGTTTGATAAT...GACTAACATTTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp TCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTAAGGGTTGTGTAGCAAGGAATTaGAGATTCCCTCCTCACACC +
Preference number: 4 (lower is better)
Translates to: SWNPHFSIITHKAVKPKGCVARN*RFPPHT
Trigger: GGTGTGAGGAGGGAATCTGCAATTCCTTGCTACACA...ACCCTTAGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359333.8
CDS-3UTR CCA 90 bp CTCTGTAGACACAATTGGTCGCCCATTCTGTTTATAGGAAGTCTTCCATCCTGCAACTCCTCTGACTCTTaGAATCCTCATTTTTCAATA +
Preference number: 4 (lower is better)
Translates to: LCRHNWSPILFIGSLPSCNSSDS*NPHFSI
Trigger: TATTGAAAAATGAGGATTCCAAGAGTCAGAGGAGTT...GCAGGATGGAAGACTTCCTATAAACAGAATGGGCGACCAATTGTGTCTACAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp CAATCTAACGCTGGAAATATTGGATATGGGGTAGGTCACCAAATGTTGCCAGAAAAACACAATAGGCTTTaGGATCAGGAGTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: QSNAGNIGYGVGHQMLPEKHNRL*DQEFIP
Trigger: TGGAATGAACTCCTGATCCCAAAGCCTATTGTGTTT...TTCTGGCAACATTTGGTGACCTACCCCATATCCAATATTTCCAGCGTTAGATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp ATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAATGTTACTCTGTAGACACAATTaGTCGCCCATTCTGTTTATA +
Preference number: 4 (lower is better)
Translates to: MSRQKHLFLTHSRRWKMLLCRHN*SPILFI
Trigger: TATAAACAGAATGGGCGACCAATTGTGTCTACAGAG...TAACATTTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp TCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTAAGGGTAGAAACACTTGTTTCTaGCACATAGTAGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: SWNPHFSIITHKAVKPKGRNTCF*HIVGAG
Trigger: TCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCT...ACCCTTAGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR TCA 90 bp TCTGACTCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTAGAAACACTTGTTTCTaGCACATAGTAGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: SDSWNPHFSIITHKAVKPRNTCF*HIVGAG
Trigger: TCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCT...AGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGAGTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR GCA 90 bp AATATTGGATATGGGGTAGGTCACCAAATGTTGCCAGAAGACTCAAATTATGCCTATTTACTAGCAGTGTaGCCTCGTGCACATTATCAA +
Preference number: 4 (lower is better)
Translates to: NIGYGVGHQMLPEDSNYAYLLAV*PRAHYQ
Trigger: TTGATAATGTGCACGAGGGCACACTGCTAGTAAATA...GGCATAATTTGAGTCTTCTGGCAACATTTGGTGACCTACCCCATATCCAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCTGACTCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTAGAGAAGAGAAATCTTaGGAGAGTCATTTAAGGGGG +
Preference number: 4 (lower is better)
Translates to: SDSWNPHFSIITHKAVKPREEKS*ESHLRG
Trigger: CCCCCTTAAATGACTCTCCCAAGATTTCTCTTCTCT...AGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGAGTCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CCA 90 bp TCTGACTCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTAACTCCTCTGACTCTTaGAATCCTCATTTTTCAATA +
Preference number: 4 (lower is better)
Translates to: SDSWNPHFSIITHKAVKPNSSDS*NPHFSI
Trigger: TATTGAAAAATGAGGATTCCAAGAGTCAGAGGAGTT...AGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGAGTCAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp AGGCCCTGGACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCTCTGGATGGCTAGGTaGTTCCTCCTCAGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: RPWTDARAGKEGWLRRGRLWMAR*FLLRCW
Trigger: CCAGCACCTGAGGAGGAACAACCTAGCCATCCAGAG...ACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGTCCAGGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS CCA 90 bp CCCCAGGCTCCACCATCCAGGATCCGGTCCTGGGCACGCCCTGCCTaGGGCTTCAGTGCACACTGGCATCTCTGGAATTCAGGTGATGGG +
Preference number: 5 (lower is better)
Translates to: PQAPPSRIRSWARPA*GFSAHWHLWNSGDG
Trigger: CCCATCACCTGAATTCCAGAGATGCCAGTGTGCACTGAAGCCCCAGGCAGGGCGTGCCCAGGACCGGATCCTGGATGGTGGAGCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410004.1
CDS-3UTR CAA 90 bp GGGGCCAGGCTGCGAAGGAGACTGAGAGCGCGACAAGGCCCTGGACAGATGCCCGGCTCTCAGTCTGCATaGATTGGAGCTGGGACCGAA +
Preference number: 5 (lower is better)
Translates to: GARLRRRLRARQGPGQMPGSQSA*IGAGTE
Trigger: TTCGGTCCCAGCTCCAATCAATGCAGACTGAGAGCC...GGGCATCTGTCCAGGGCCTTGTCGCGCTCTCAGTCTCCTTCGCAGCCTGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp GCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAGCAGCTCCCCGAAGCCGAAGGTaGATTGGAGCTCTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: ARGRKAGLGGGVSYGLAAPRSRR*IGALPG
Trigger: CCCTGGAAGAGCTCCAATCAACCTTCGGCTTCGGGG...AGCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp ACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGGGGATCACCAGCGCTTaGACTGACTTTGCTCGTCCA +
Preference number: 5 (lower is better)
Translates to: TDARAGKEGWLRRGRQLWGITSA*TDFARP
Trigger: TGGACGAGCAAAGTCAGTCAAAGCGCTGGTGATCCC...CCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS CCA 90 bp TCCCGTGCATTGCCTGAGGGCCCTGGGCTCTCAGTCTGCATTGATTaGAGCTGGGACCGAAGCCCCCATTCCAGAAACCGGACCAGGAGA +
Preference number: 5 (lower is better)
Translates to: SRALPEGPGLSVCID*SWDRSPHSRNRTRR
Trigger: TCTCCTGGTCCGGTTTCTGGAATGGGGGCTTCGGTCCCAGCTCCAATCAATGCAGACTGAGAGCCCAGGGCCCTCAGGCAATGCACGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp GGGGCCAGGCTGCGAAGGAGACTGAGAGCGCGACAAGGCCCTGGACAGATGCCCACTTCAAAGGCTTCATaGTCCCGTGCATTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: GARLRRRLRARQGPGQMPTSKAS*SRALPE
Trigger: CTCAGGCAATGCACGGGACAATGAAGCCTTTGAAGT...GGGCATCTGTCCAGGGCCTTGTCGCGCTCTCAGTCTCCTTCGCAGCCTGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp AGCGCGACAAGGCCCTGGACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGACTTCAAAGGCTTCATaGTCCCGTGCATTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: SATRPWTDARAGKEGWLRTSKAS*SRALPE
Trigger: CTCAGGCAATGCACGGGACAATGAAGCCTTTGAAGT...CCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGTCCAGGGCCTTGTCGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS GCA 90 bp GCTTCATTGTCCCGTGCATTGCCTGAGGGCCCTGGGCTCTCAGTCTaGATTGATTGGAGCTGGGACCGAAGCCCCCATTCCAGAAACCGG +
Preference number: 5 (lower is better)
Translates to: ASLSRALPEGPGLSV*IDWSWDRSPHSRNR
Trigger: CCGGTTTCTGGAATGGGGGCTTCGGTCCCAGCTCCAATCAATGCAGACTGAGAGCCCAGGGCCCTCAGGCAATGCACGGGACAATGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS CCA 90 bp CCCCGAAGCCGAAGGTTGATTGGAGCTCTTCCAGGGCTTCCTTCCTaGGCCATGGACCCCTCTGAGGCCATTCGCCTCTGTTCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: PRSRRLIGALPGLPS*AMDPSEAIRLCSSL
Trigger: CAAACTGGAACAGAGGCGAATGGCCTCAGAGGGGTCCATGGCCCAGGAAGGAAGCCCTGGAAGAGCTCCAATCAACCTTCGGCTTCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
ENST00000471161.1
ENST00000480421.5
ENST00000487419.1
CDS-3UTR CAA 90 bp ATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAATTGAAGTTGAACGGTaGGGGCCAGGCTGCGAAGGA +
Preference number: 5 (lower is better)
Translates to: MPARGRKAGLGGGVSYGLIEVER*GPGCEG
Trigger: TCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAAT...TAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGCGGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp CGACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTGCTCTCATTGTCCCGTGCATaGCCTGAGGGCCCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: RPKPTSQPQHTIPGNLVLSLSRA*PEGPGL
Trigger: GAGCCCAGGGCCCTCAGGCAATGCACGGGACAATGA...GAGCACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp GCGCGGGGAAGGAAGGCTGGCTTAGGAGGGGGCGTCAGCTATGGTTTAGCAGCTGTCCCTAGACAGGGATaGGGAGACATGCAAGTTGCT +
Preference number: 5 (lower is better)
Translates to: ARGRKAGLGGGVSYGLAAVPRQG*GDMQVA
Trigger: AGCAACTTGCATGTCTCCCAATCCCTGTCTAGGGAC...AGCTGCTAAACCATAGCTGACGCCCCCTCCTAAGCCAGCCTTCCTTCCCCGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS CCA 90 bp CAAAGCAGACATCATAGGCAGGGGGTGGAGTCAGAGGCTCTAATGTaGGGACTGCCGCCAAGCTCTGCAGATCAGGAGCAGTGGACACAG +
Preference number: 5 (lower is better)
Translates to: QSRHHRQGVESEALM*GLPPSSADQEQWTQ
Trigger: CTGTGTCCACTGCTCCTGATCTGCAGAGCTTGGCGGCAGTCCCCACATTAGAGCCTCTGACTCCACCCCCTGCCTATGATGTCTGCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
ENST00000471161.1
ENST00000480421.5
ENST00000487419.1
CDS-3UTR CAA 90 bp CGACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTGCTCTGGTTGGTCCAACTCTaGGGGGCGGCACTGGGATTC +
Preference number: 5 (lower is better)
Translates to: RPKPTSQPQHTIPGNLVLWLVQL*GAALGF
Trigger: GAATCCCAGTGCCGCCCCCAAGAGTTGGACCAACCA...GAGCACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp CGACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTGCTCCGCCTCTGTTCCAGTTaGGCTCTCCTGGACCCCTCT +
Preference number: 5 (lower is better)
Translates to: RPKPTSQPQHTIPGNLVLRLCSS*ALLDPS
Trigger: AGAGGGGTCCAGGAGAGCCAAACTGGAACAGAGGCG...GAGCACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp AGCGCGACAAGGCCCTGGACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGCTTCATACCAACCCATaGTTAAAACTGGAAGTCCCT +
Preference number: 5 (lower is better)
Translates to: SATRPWTDARAGKEGWLRLHTNP*LKLEVP
Trigger: AGGGACTTCCAGTTTTAACAATGGGTTGGTATGAAG...CCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGTCCAGGGCCTTGTCGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp CTGGAGTTTTGCTTTATTGAAGTTGAACGGTTGGGGCCAGGCTGCGAAGGAGACTCATTGTCCCGTGCATaGCCTGAGGGCCCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: LEFCFIEVERLGPGCEGDSLSRA*PEGPGL
Trigger: GAGCCCAGGGCCCTCAGGCAATGCACGGGACAATGA...GTCTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAATAAAGCAAAACTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp GACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTGCTCATGGTTGGTCCAACTCTaGGGGGCGGCACTGGGATTC +
Preference number: 5 (lower is better)
Translates to: DRNLHHSRSTQFQETWCSWLVQL*GAALGF
Trigger: GAATCCCAGTGCCGCCCCCAAGAGTTGGACCAACCA...TGAGCACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp AGCGCGACAAGGCCCTGGACAGATGCCCGCGCGGGGAAGGAAGGCTGGCTTAGGGTAGGTCACCAAATGTaGCCAGAAGACTCAAATTAT +
Preference number: 5 (lower is better)
Translates to: SATRPWTDARAGKEGWLRVGHQM*PEDSNY
Trigger: ATAATTTGAGTCTTCTGGCAACATTTGGTGACCTAC...CCTAAGCCAGCCTTCCTTCCCCGCGCGGGCATCTGTCCAGGGCCTTGTCGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp GGGATCTCAGGAATCAGGACCGGCGGCTGGGGTGAAAGCCTAGCGGTCAGAGCTTTTGCTTTATTGAAGTaGAACGGTTGGGGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: GISGIRTGGWGESLAVRAFALLK*NGWGQA
Trigger: AGCCTGGCCCCAACCGTTCAACTTCAATAAAGCAAA...AGCTCTGACCGCTAGGCTTTCACCCCAGCCGCCGGTCCTGATTCCTGAGATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp CTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCTCATTGTCCCGTGCATaGCCTGAGGGCCCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: LAVCPRAHYQTPLTLGILSLSRA*PEGPGL
Trigger: GAGCCCAGGGCCCTCAGGCAATGCACGGGACAATGA...GAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp GCTGTCAAGCCTAAGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATTCATTGTCCCGTGCATaGCCTGAGGGCCCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: AVKPKGSNSSNSTWNRSNSLSRA*PEGPGL
Trigger: GAGCCCAGGGCCCTCAGGCAATGCACGGGACAATGA...ATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCTTAGGCTTGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp ACTCAAATTATGCCACCCATATCTCAGCTGGGAAGGGCTTACCGTGGCCTGACTTGGTTGGTCCAACTCTaGGGGGCGGCACTGGGATTC +
Preference number: 5 (lower is better)
Translates to: TQIMPPISQLGRAYRGLTWLVQL*GAALGF
Trigger: GAATCCCAGTGCCGCCCCCAAGAGTTGGACCAACCA...AGTCAGGCCACGGTAAGCCCTTCCCAGCTGAGATATGGGTGGCATAATTTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp CTGGAGTTTTGCTTTATTGAAGTTGAACGGTTGGGGCCAGGCTGCGAAGGAGACTGGTTGGTCCAACTCTaGGGGGCGGCACTGGGATTC +
Preference number: 5 (lower is better)
Translates to: LEFCFIEVERLGPGCEGDWLVQL*GAALGF
Trigger: GAATCCCAGTGCCGCCCCCAAGAGTTGGACCAACCA...GTCTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAATAAAGCAAAACTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp GGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGCCGCCACTCAGAGCTCTGGATGGCTAGGTaGTTCCTCCTCAGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: GSNSSNSTWNRSNSRHSELWMAR*FLLRCW
Trigger: CCAGCACCTGAGGAGGAACAACCTAGCCATCCAGAG...CTCTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp AGAAGCAATAGCCGCCACTCAGAGGTTACTTCTTCCTTCTCCGCCTTCTCTGGACGCCTCTGTTCCAGTTaGGCTCTCCTGGACCCCTCT +
Preference number: 5 (lower is better)
Translates to: RSNSRHSEVTSSFSAFSGRLCSS*ALLDPS
Trigger: AGAGGGGTCCAGGAGAGCCAAACTGGAACAGAGGCG...TCCAGAGAAGGCGGAGAAGGAAGAAGTAACCTCTGAGTGGCGGCTATTGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp CTGGAGTTTTGCTTTATTGAAGTTGAACGGTTGGGGCCAGGCTGCGAAGGAGACCGCCTCTGTTCCAGTTaGGCTCTCCTGGACCCCTCT +
Preference number: 5 (lower is better)
Translates to: LEFCFIEVERLGPGCEGDRLCSS*ALLDPS
Trigger: AGAGGGGTCCAGGAGAGCCAAACTGGAACAGAGGCG...GTCTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAATAAAGCAAAACTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp ACTCAAATTATGCCACCCATATCTCAGCTGGGAAGGGCTTACCGTGGCCTGACTCCCCGAAGCCGAAGGTaGATTGGAGCTCTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: TQIMPPISQLGRAYRGLTPRSRR*IGALPG
Trigger: CCCTGGAAGAGCTCCAATCAACCTTCGGCTTCGGGG...AGTCAGGCCACGGTAAGCCCTTCCCAGCTGAGATATGGGTGGCATAATTTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS TCA 90 bp AGAAAGTGCACACAGGCGCACCAAAGCCACAGGGACACAACTGCTTaGGAAACAATTGTACAGGCAAAGGCCCAGCACAATGGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: RKCTQAHQSHRDTTA*ETIVQAKAQHNGRR
Trigger: CCTCCGGCCATTGTGCTGGGCCTTTGCCTGTACAATTGTTTCTCAAGCAGTTGTGTCCCTGTGGCTTTGGTGCGCCTGTGTGCACTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359333.8
ENST00000482420.1
CDS GCA 90 bp AGGGAGAAAGTGCACACAGGCGCACCAAAGCCACAGGGACACAACTaGTTGAGAAACAATTGTACAGGCAAAGGCCCAGCACAATGGCCG +
Preference number: 5 (lower is better)
Translates to: REKVHTGAPKPQGHN*LRNNCTGKGPAQWP
Trigger: CGGCCATTGTGCTGGGCCTTTGCCTGTACAATTGTTTCTCAAGCAGTTGTGTCCCTGTGGCTTTGGTGCGCCTGTGTGCACTTTCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359333.8
ENST00000482420.1
CDS-3UTR CAA 90 bp GGCTACATATGGATGATTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACATGTTTCATTGTCCCGTGCATaGCCTGAGGGCCCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: GYIWMIQEGVSSPESSHVSLSRA*PEGPGL
Trigger: GAGCCCAGGGCCCTCAGGCAATGCACGGGACAATGA...AACATGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAATCATCCATATGTAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp CGTCAGCTATGGTTTAGCAGCTTCCAGCGACCGAAACCTACATCACAGCCGCAGACTTCAAAGGCTTCATaGTCCCGTGCATTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: RQLWFSSFQRPKPTSQPQTSKAS*SRALPE
Trigger: CTCAGGCAATGCACGGGACAATGAAGCCTTTGAAGT...CTGCGGCTGTGATGTAGGTTTCGGTCGCTGGAAGCTGCTAAACCATAGCTGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp CCGGGGCTACATATGGATGATTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACAGGGATCACCAGCGCTTaGACTGACTTTGCTCGTCCA +
Preference number: 5 (lower is better)
Translates to: PGLHMDDSRGSLLARKFTGITSA*TDFARP
Trigger: TGGACGAGCAAAGTCAGTCAAAGCGCTGGTGATCCC...TGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAATCATCCATATGTAGCCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp CTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCGGCTCTCAGTCTGCATaGATTGGAGCTGGGACCGAA +
Preference number: 5 (lower is better)
Translates to: LAVCPRAHYQTPLTLGILGSQSA*IGAGTE
Trigger: TTCGGTCCCAGCTCCAATCAATGCAGACTGAGAGCC...GAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp CTCCTCAGGGTCCAAGTCCCCATTTATGATGTCCAGGCAGAAACACTTGTTTCTCTCTGGATGGCTAGGTaGTTCCTCCTCAGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: LLRVQVPIYDVQAETLVSLWMAR*FLLRCW
Trigger: CCAGCACCTGAGGAGGAACAACCTAGCCATCCAGAG...AGAAACAAGTGTTTCTGCCTGGACATCATAAATGGGGACTTGGACCCTGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp CCAGCGACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTACCTGGTGCTCAATATaGGGATCTCAGGAATCAGGA +
Preference number: 5 (lower is better)
Translates to: PATETYITAAAHNSRKPGTWCSI*GSQESG
Trigger: TCCTGATTCCTGAGATCCCAATATTGAGCACCAGGT...ACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTCGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp GGCTACATATGGATGATTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACATGTTCTCTGGATGGCTAGGTaGTTCCTCCTCAGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: GYIWMIQEGVSSPESSHVLWMAR*FLLRCW
Trigger: CCAGCACCTGAGGAGGAACAACCTAGCCATCCAGAG...AACATGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAATCATCCATATGTAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp TTTACTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCGCCTCTGTTCCAGTTaGGCTCTCCTGGACCCCTCT +
Preference number: 5 (lower is better)
Translates to: FTSSVPSCTLSNSSDSWNRLCSS*ALLDPS
Trigger: AGAGGGGTCCAGGAGAGCCAAACTGGAACAGAGGCG...ATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp CTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCGTCCCTAGACAGGGATaGGGAGACATGCAAGTTGCT +
Preference number: 5 (lower is better)
Translates to: LAVCPRAHYQTPLTLGILVPRQG*GDMQVA
Trigger: AGCAACTTGCATGTCTCCCAATCCCTGTCTAGGGAC...GAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp CAGCAGCTGTCCCTAGACAGGGATTGGGAGACATGCAAGTTGCTTGGCTTCCTAACCTGGTGCTCAATATaGGGATCTCAGGAATCAGGA +
Preference number: 5 (lower is better)
Translates to: QQLSLDRDWETCKLLGFLTWCSI*GSQESG
Trigger: TCCTGATTCCTGAGATCCCAATATTGAGCACCAGGT...TAGGAAGCCAAGCAACTTGCATGTCTCCCAATCCCTGTCTAGGGACAGCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp CTCCTCAGGGTCCAAGTCCCCATTTATGATGTCCAGGCAGAAACACTTGTTTCTATTGAAGTTGAACGGTaGGGGCCAGGCTGCGAAGGA +
Preference number: 5 (lower is better)
Translates to: LLRVQVPIYDVQAETLVSIEVER*GPGCEG
Trigger: TCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAAT...AGAAACAAGTGTTTCTGCCTGGACATCATAAATGGGGACTTGGACCCTGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp AACCTGGTGCTCAATATTGGGATCTCAGGAATCAGGACCGGCGGCTGGGGTGAATGGAGTTTTGCTTTATaGAAGTTGAACGGTTGGGGC +
Preference number: 5 (lower is better)
Translates to: NLVLNIGISGIRTGGWGEWSFAL*KLNGWG
Trigger: GCCCCAACCGTTCAACTTCAATAAAGCAAAACTCCA...TTCACCCCAGCCGCCGGTCCTGATTCCTGAGATCCCAATATTGAGCACCAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp TGGAAGTCCCTCCACCTGGGGTCACTGACTCCACTGTTTTCAGATAGGATGGGGTGGAGTTTTGCTTTATaGAAGTTGAACGGTTGGGGC +
Preference number: 5 (lower is better)
Translates to: WKSLHLGSLTPLFSDRMGWSFAL*KLNGWG
Trigger: GCCCCAACCGTTCAACTTCAATAAAGCAAAACTCCA...CCCCATCCTATCTGAAAACAGTGGAGTCAGTGACCCCAGGTGGAGGGACTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp CTGGAGTTTTGCTTTATTGAAGTTGAACGGTTGGGGCCAGGCTGCGAAGGAGACCAGGGACACAACTGCTaGAGAAACAATTGTACAGGC +
Preference number: 5 (lower is better)
Translates to: LEFCFIEVERLGPGCEGDQGHNC*RNNCTG
Trigger: GCCTGTACAATTGTTTCTCAAGCAGTTGTGTCCCTG...GTCTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAATAAAGCAAAACTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359333.8
CDS-3UTR CAA 90 bp CTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCACTTCAAAGGCTTCATaGTCCCGTGCATTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: LAVCPRAHYQTPLTLGILTSKAS*SRALPE
Trigger: CTCAGGCAATGCACGGGACAATGAAGCCTTTGAAGT...GAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp TTTATGATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAATGGTTGGTCCAACTCTaGGGGGCGGCACTGGGATTC +
Preference number: 5 (lower is better)
Translates to: FMMSRQKHLFLTHSRRWKWLVQL*GAALGF
Trigger: GAATCCCAGTGCCGCCCCCAAGAGTTGGACCAACCA...TTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACATCATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp TTTATGATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAACCCCGAAGCCGAAGGTaGATTGGAGCTCTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: FMMSRQKHLFLTHSRRWKPRSRR*IGALPG
Trigger: CCCTGGAAGAGCTCCAATCAACCTTCGGCTTCGGGG...TTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACATCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp AGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATAGCCGCCACTCAGGAGAGAAGAGAAATCTaGGGAGAGTCATTTAAGGGG +
Preference number: 5 (lower is better)
Translates to: RVLTARTAPGTEAIAATQERREI*GESFKG
Trigger: CCCCTTAAATGACTCTCCCAAGATTTCTCTTCTCTC...CTGAGTGGCGGCTATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp GCTTTATTGAAGTTGAACGGTTGGGGCCAGGCTGCGAAGGAGACTGAGAGCGCGGTAGGTCACCAAATGTaGCCAGAAGACTCAAATTAT +
Preference number: 5 (lower is better)
Translates to: ALLKLNGWGQAAKETESAVGHQM*PEDSNY
Trigger: ATAATTTGAGTCTTCTGGCAACATTTGGTGACCTAC...CGCGCTCTCAGTCTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAATAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp CAGCAGCTGTCCCTAGACAGGGATTGGGAGACATGCAAGTTGCTTGGCTTCCTAAGACATGCAAGTTGCTaGGCTTCCTATTACCTTGTG +
Preference number: 5 (lower is better)
Translates to: QQLSLDRDWETCKLLGFLRHASC*ASYYLV
Trigger: CACAAGGTAATAGGAAGCCAAGCAACTTGCATGTCT...TAGGAAGCCAAGCAACTTGCATGTCTCCCAATCCCTGTCTAGGGACAGCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp CGACCGAAACCTACATCACAGCCGCAGCACACAATTCCAGGAAACCTGGTGCTCCTTCATACCAACCCATaGTTAAAACTGGAAGTCCCT +
Preference number: 5 (lower is better)
Translates to: RPKPTSQPQHTIPGNLVLLHTNP*LKLEVP
Trigger: AGGGACTTCCAGTTTTAACAATGGGTTGGTATGAAG...GAGCACCAGGTTTCCTGGAATTGTGTGCTGCGGCTGTGATGTAGGTTTCGGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp CTGGAGTTTTGCTTTATTGAAGTTGAACGGTTGGGGCCAGGCTGCGAAGGAGACTTTGCTTTATTGAAGTaGAACGGTTGGGGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: LEFCFIEVERLGPGCEGDFALLK*NGWGQA
Trigger: AGCCTGGCCCCAACCGTTCAACTTCAATAAAGCAAA...GTCTCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAATAAAGCAAAACTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp CTCTGGATCACCTCCCTACCTCATCCTCAATCTAACGCTGGAAATATTGGATATACAGCCTGTCAGAAGTaGCCAGCGCTCTGTGTAGCA +
Preference number: 5 (lower is better)
Translates to: LWITSLPHPQSNAGNIGYTACQK*PALCVA
Trigger: TGCTACACAGAGCGCTGGCAACTTCTGACAGGCTGT...ATATCCAATATTTCCAGCGTTAGATTGAGGATGAGGTAGGGAGGTGATCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359333.8
CDS-3UTR CAA 90 bp CTCTGGATCACCTCCCTACCTCATCCTCAATCTAACGCTGGAAATATTGGATATGGCTCTCAGTCTGCATaGATTGGAGCTGGGACCGAA +
Preference number: 5 (lower is better)
Translates to: LWITSLPHPQSNAGNIGYGSQSA*IGAGTE
Trigger: TTCGGTCCCAGCTCCAATCAATGCAGACTGAGAGCC...ATATCCAATATTTCCAGCGTTAGATTGAGGATGAGGTAGGGAGGTGATCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp GGCTACATATGGATGATTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACATGTTCTGCTTGAGAAACAATaGTACAGGCAAAGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: GYIWMIQEGVSSPESSHVLLEKQ*YRQRPS
Trigger: GCTGGGCCTTTGCCTGTACAATTGTTTCTCAAGCAG...AACATGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAATCATCCATATGTAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359333.8
CDS-3UTR CAA 90 bp TCCCCATTTATGATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCACTTCAAAGGCTTCATaGTCCCGTGCATTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: SPFMMSRQKHLFLTHSRRTSKAS*SRALPE
Trigger: CTCAGGCAATGCACGGGACAATGAAGCCTTTGAAGT...GCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACATCATAAATGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp GCTGTCAAGCCTAAGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGCAATGAGAGAAGAGAAATCTaGGGAGAGTCATTTAAGGGG +
Preference number: 5 (lower is better)
Translates to: AVKPKGSNSSNSTWNRSNERREI*GESFKG
Trigger: CCCCTTAAATGACTCTCCCAAGATTTCTCTTCTCTC...ATTGCTTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCTTAGGCTTGACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp TTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACATGTTTCACTCCTTCTGGCCTGAGAGAAGAGAAATCTaGGGAGAGTCATTTAAGGGG +
Preference number: 5 (lower is better)
Translates to: FKRESPRQKVHMFHSFWPERREI*GESFKG
Trigger: CCCCTTAAATGACTCTCCCAAGATTTCTCTTCTCTC...AGGCCAGAAGGAGTGAAACATGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp CAATCTAACGCTGGAAATATTGGATATGGGGTAGGTCACCAAATGTTGCCAGAAATTGAAGTTGAACGGTaGGGGCCAGGCTGCGAAGGA +
Preference number: 5 (lower is better)
Translates to: QSNAGNIGYGVGHQMLPEIEVER*GPGCEG
Trigger: TCCTTCGCAGCCTGGCCCCAACCGTTCAACTTCAAT...TTCTGGCAACATTTGGTGACCTACCCCATATCCAATATTTCCAGCGTTAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp CTCCTCAGGGTCCAAGTCCCCATTTATGATGTCCAGGCAGAAACACTTGTTTCTTTTGCTTTATTGAAGTaGAACGGTTGGGGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: LLRVQVPIYDVQAETLVSFALLK*NGWGQA
Trigger: AGCCTGGCCCCAACCGTTCAACTTCAATAAAGCAAA...AGAAACAAGTGTTTCTGCCTGGACATCATAAATGGGGACTTGGACCCTGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp TCTGACTCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTCCCCGAAGCCGAAGGTaGATTGGAGCTCTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: SDSWNPHFSIITHKAVKPPRSRR*IGALPG
Trigger: CCCTGGAAGAGCTCCAATCAACCTTCGGCTTCGGGG...AGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGAGTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp ACAAAGCTGTCAAGCCTAAGGGTTCTAACAGCTCGAACAGCACCTGGAACAGAAGAGAGAAGAGAAATCTaGGGAGAGTCATTTAAGGGG +
Preference number: 5 (lower is better)
Translates to: TKLSSLRVLTARTAPGTEERREI*GESFKG
Trigger: CCCCTTAAATGACTCTCCCAAGATTTCTCTTCTCTC...TTCTGTTCCAGGTGCTGTTCGAGCTGTTAGAACCCTTAGGCTTGACAGCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp GGCTACATATGGATGATTCAAGAGGGAGTCTCCTCGCCAGAAAGTTCACATGTTTGGGAGACATGCAAGTaGCTTGGCTTCCTATTACCT +
Preference number: 5 (lower is better)
Translates to: GYIWMIQEGVSSPESSHVWETCK*LGFLLP
Trigger: AGGTAATAGGAAGCCAAGCAACTTGCATGTCTCCCA...AACATGTGAACTTTCTGGCGAGGAGACTCCCTCTTGAATCATCCATATGTAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp CTCTGTAGACACAATTGGTCGCCCATTCTGTTTATAGGAAGTCTTCCATCCTGCTGGGAGACATGCAAGTaGCTTGGCTTCCTATTACCT +
Preference number: 5 (lower is better)
Translates to: LCRHNWSPILFIGSLPSCWETCK*LGFLLP
Trigger: AGGTAATAGGAAGCCAAGCAACTTGCATGTCTCCCA...GCAGGATGGAAGACTTCCTATAAACAGAATGGGCGACCAATTGTGTCTACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp TTTATGATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAAGTCCCTAGACAGGGATaGGGAGACATGCAAGTTGCT +
Preference number: 5 (lower is better)
Translates to: FMMSRQKHLFLTHSRRWKVPRQG*GDMQVA
Trigger: AGCAACTTGCATGTCTCCCAATCCCTGTCTAGGGAC...TTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACATCATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp TCCCCATTTATGATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCACCTGGTGCTCAATATaGGGATCTCAGGAATCAGGA +
Preference number: 5 (lower is better)
Translates to: SPFMMSRQKHLFLTHSRRTWCSI*GSQESG
Trigger: TCCTGATTCCTGAGATCCCAATATTGAGCACCAGGT...GCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACATCATAAATGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp ACTCAAATTATGCCACCCATATCTCAGCTGGGAAGGGCTTACCGTGGCCTGACTTCTGCTGATCCTAACTaGTTAAACTCAGTTTGCAAA +
Preference number: 5 (lower is better)
Translates to: TQIMPPISQLGRAYRGLTSADPN*LNSVCK
Trigger: TTTGCAAACTGAGTTTAACAAGTTAGGATCAGCAGA...AGTCAGGCCACGGTAAGCCCTTCCCAGCTGAGATATGGGTGGCATAATTTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359333.8
CDS-3UTR CAA 90 bp TCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTAAGGGTCTCTGGATGGCTAGGTaGTTCCTCCTCAGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: SWNPHFSIITHKAVKPKGLWMAR*FLLRCW
Trigger: CCAGCACCTGAGGAGGAACAACCTAGCCATCCAGAG...ACCCTTAGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp CTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCGTAGGTCACCAAATGTaGCCAGAAGACTCAAATTAT +
Preference number: 5 (lower is better)
Translates to: LAVCPRAHYQTPLTLGILVGHQM*PEDSNY
Trigger: ATAATTTGAGTCTTCTGGCAACATTTGGTGACCTAC...GAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp TCTGACTCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTGGCTCTCAGTCTGCATaGATTGGAGCTGGGACCGAA +
Preference number: 5 (lower is better)
Translates to: SDSWNPHFSIITHKAVKPGSQSA*IGAGTE
Trigger: TTCGGTCCCAGCTCCAATCAATGCAGACTGAGAGCC...AGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGAGTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp TTTACTAGCAGTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATGAGAGAAGAGAAATCTaGGGAGAGTCATTTAAGGGG +
Preference number: 5 (lower is better)
Translates to: FTSSVPSCTLSNSSDSWNERREI*GESFKG
Trigger: CCCCTTAAATGACTCTCCCAAGATTTCTCTTCTCTC...ATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACACTGCTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp TCCCCATTTATGATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCCTTCATACCAACCCATaGTTAAAACTGGAAGTCCCT +
Preference number: 5 (lower is better)
Translates to: SPFMMSRQKHLFLTHSRRLHTNP*LKLEVP
Trigger: AGGGACTTCCAGTTTTAACAATGGGTTGGTATGAAG...GCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACATCATAAATGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp GTGTGCCCTCGTGCACATTATCAAACTCCTCTGACTCTTGGAATCCTCATTTTTTGGAGTTTTGCTTTATaGAAGTTGAACGGTTGGGGC +
Preference number: 5 (lower is better)
Translates to: VCPRAHYQTPLTLGILIFWSFAL*KLNGWG
Trigger: GCCCCAACCGTTCAACTTCAATAAAGCAAAACTCCA...AAAAATGAGGATTCCAAGAGTCAGAGGAGTTTGATAATGTGCACGAGGGCACAC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp TTTATGATGTCCAGGCAGAAACACTTGTTTCTGACACATAGTAGGCGCTGGAAACTTGTTAAACTCAGTTaGCAAATTTCCTGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: FMMSRQKHLFLTHSRRWKLVKLS*QISCQE
Trigger: CTCCTGGCAGGAAATTTGCAAACTGAGTTTAACAAG...TTTCCAGCGCCTACTATGTGTCAGAAACAAGTGTTTCTGCCTGGACATCATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359333.8
CDS-3UTR CAA 90 bp AATATTGGATATGGGGTAGGTCACCAAATGTTGCCAGAAGACTCAAATTATGCCAGACATGCAAGTTGCTaGGCTTCCTATTACCTTGTG +
Preference number: 5 (lower is better)
Translates to: NIGYGVGHQMLPEDSNYARHASC*ASYYLV
Trigger: CACAAGGTAATAGGAAGCCAAGCAACTTGCATGTCT...GGCATAATTTGAGTCTTCTGGCAACATTTGGTGACCTACCCCATATCCAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp TCTGACTCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTTGGGAGACATGCAAGTaGCTTGGCTTCCTATTACCT +
Preference number: 5 (lower is better)
Translates to: SDSWNPHFSIITHKAVKPWETCK*LGFLLP
Trigger: AGGTAATAGGAAGCCAAGCAACTTGCATGTCTCCCA...AGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGAGTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359333.8
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp AATATTGGATATGGGGTAGGTCACCAAATGTTGCCAGAAGACTCAAATTATGCCGTAGGTCACCAAATGTaGCCAGAAGACTCAAATTAT +
Preference number: 5 (lower is better)
Translates to: NIGYGVGHQMLPEDSNYAVGHQM*PEDSNY
Trigger: ATAATTTGAGTCTTCTGGCAACATTTGGTGACCTAC...GGCATAATTTGAGTCTTCTGGCAACATTTGGTGACCTACCCCATATCCAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS-3UTR CAA 90 bp TCTGACTCTTGGAATCCTCATTTTTCAATAATAACTCACAAAGCTGTCAAGCCTGTAGGTCACCAAATGTaGCCAGAAGACTCAAATTAT +
Preference number: 5 (lower is better)
Translates to: SDSWNPHFSIITHKAVKPVGHQM*PEDSNY
Trigger: ATAATTTGAGTCTTCTGGCAACATTTGGTGACCTAC...AGGCTTGACAGCTTTGTGAGTTATTATTGAAAAATGAGGATTCCAAGAGTCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS GCA 72 bp GGCTCCACCATCCAGGATCCGGTCCTGGGCACGCCCTaGCTGGGGCTTCAGTGCACACTGGCATCTCTGGAA +
Preference number: 6 (lower is better)
Translates to: GSTIQDPVLGTP*LGLQCTLASLE
Trigger: TTCCAGAGATGCCAGTGTGCACTGAAGCCCCAGGCAGGGCGTGCCCAGGACCGGATCCTGGATGGTGGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410004.1
CDS CCA 72 bp TCCTGGGCACGCCCTGCCTGGGGCTTCAGTGCACACTaGCATCTCTGGAATTCAGGTGATGGGGCAGGCCCC +
Preference number: 6 (lower is better)
Translates to: SWARPAWGFSAH*HLWNSGDGAGP
Trigger: GGGGCCTGCCCCATCACCTGAATTCCAGAGATGCCAGTGTGCACTGAAGCCCCAGGCAGGGCGTGCCCAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410004.1
CDS GCA 72 bp TCCCGTGCATTGCCTGAGGGCCCTGGGCTCTCAGTCTaGATTGATTGGAGCTGGGACCGAAGCCCCCATTCC +
Preference number: 6 (lower is better)
Translates to: SRALPEGPGLSV*IDWSWDRSPHS
Trigger: GGAATGGGGGCTTCGGTCCCAGCTCCAATCAATGCAGACTGAGAGCCCAGGGCCCTCAGGCAATGCACGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS GCA 72 bp GTCAGAGGCTCTAATGTGGGGACTGCCGCCAAGCTCTaGAGATCAGGAGCAGTGGACACAGCCCGTGGTCCC +
Preference number: 6 (lower is better)
Translates to: VRGSNVGTAAKL*RSGAVDTARGP
Trigger: GGGACCACGGGCTGTGTCCACTGCTCCTGATCTGCAGAGCTTGGCGGCAGTCCCCACATTAGAGCCTCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
ENST00000471161.1
ENST00000480421.5
ENST00000487419.1
CDS CCA 72 bp GAGGGCCCTGGGCTCTCAGTCTGCATTGATTGGAGCTaGGACCGAAGCCCCCATTCCAGAAACCGGACCAGG +
Preference number: 6 (lower is better)
Translates to: EGPGLSVCIDWS*DRSPHSRNRTR
Trigger: CCTGGTCCGGTTTCTGGAATGGGGGCTTCGGTCCCAGCTCCAATCAATGCAGACTGAGAGCCCAGGGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS CCA 72 bp CCACCATCCAGGATCCGGTCCTGGGCACGCCCTGCCTaGGGCTTCAGTGCACACTGGCATCTCTGGAATTCA +
Preference number: 6 (lower is better)
Translates to: PPSRIRSWARPA*GFSAHWHLWNS
Trigger: TGAATTCCAGAGATGCCAGTGTGCACTGAAGCCCCAGGCAGGGCGTGCCCAGGACCGGATCCTGGATGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410004.1
CDS CCA 72 bp TTGCCTGAGGGCCCTGGGCTCTCAGTCTGCATTGATTaGAGCTGGGACCGAAGCCCCCATTCCAGAAACCGG +
Preference number: 6 (lower is better)
Translates to: LPEGPGLSVCID*SWDRSPHSRNR
Trigger: CCGGTTTCTGGAATGGGGGCTTCGGTCCCAGCTCCAATCAATGCAGACTGAGAGCCCAGGGCCCTCAGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS CCA 72 bp TCGCCTCTGTTCCAGTTTGGCTCTCCTGGACCCCTCTaGATGGCTAGGTTGTTCCTCCTCAGGTGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: SPLFQFGSPGPL*MARLFLLRCWG
Trigger: CCCCCAGCACCTGAGGAGGAACAACCTAGCCATCCAGAGGGGTCCAGGAGAGCCAAACTGGAACAGAGGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
ENST00000471161.1
ENST00000480421.5
ENST00000487419.1
CDS CAA 90 bp CATTGTCCCGTGCATTGCCTGAGGGCCCTGGGCTCTCAGTCTGCATaGATTGGAGCTGGGACCGAAGCCCCCATTCCAGAAACCGGACCA +
Preference number: 6 (lower is better)
Translates to: HCPVHCLRALGSQSA*IGAGTEAPIPETGP
Trigger: TGGTCCGGTTTCTGGAATGGGGGCTTCGGTCCCAGCTCCAATCAATGCAGACTGAGAGCCCAGGGCCCTCAGGCAATGCACGGGACAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS CAA 90 bp TCCTGGGCCATGGACCCCTCTGAGGCCATTCGCCTCTGTTCCAGTTaGGCTCTCCTGGACCCCTCTGGATGGCTAGGTTGTTCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: SWAMDPSEAIRLCSS*ALLDPSGWLGCSSS
Trigger: TGAGGAGGAACAACCTAGCCATCCAGAGGGGTCCAGGAGAGCCAAACTGGAACAGAGGCGAATGGCCTCAGAGGGGTCCATGGCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
ENST00000471161.1
ENST00000480421.5
ENST00000487419.1
CDS CCA 72 bp CGAAGGTTGATTGGAGCTCTTCCAGGGCTTCCTTCCTaGGCCATGGACCCCTCTGAGGCCATTCGCCTCTGT +
Preference number: 6 (lower is better)
Translates to: RRLIGALPGLPS*AMDPSEAIRLC
Trigger: ACAGAGGCGAATGGCCTCAGAGGGGTCCATGGCCCAGGAAGGAAGCCCTGGAAGAGCTCCAATCAACCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
ENST00000471161.1
ENST00000480421.5
ENST00000487419.1
CDS CCA 72 bp CATCATAGGCAGGGGGTGGAGTCAGAGGCTCTAATGTaGGGACTGCCGCCAAGCTCTGCAGATCAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: HHRQGVESEALM*GLPPSSADQEQ
Trigger: CTGCTCCTGATCTGCAGAGCTTGGCGGCAGTCCCCACATTAGAGCCTCTGACTCCACCCCCTGCCTATGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
ENST00000471161.1
ENST00000480421.5
ENST00000487419.1
CDS CAA 72 bp GTGCATTGCCTGAGGGCCCTGGGCTCTCAGTCTGCATaGATTGGAGCTGGGACCGAAGCCCCCATTCCAGAA +
Preference number: 6 (lower is better)
Translates to: VHCLRALGSQSA*IGAGTEAPIPE
Trigger: TTCTGGAATGGGGGCTTCGGTCCCAGCTCCAATCAATGCAGACTGAGAGCCCAGGGCCCTCAGGCAATGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
CDS CCA 72 bp CTCTGTTCCAGTTTGGCTCTCCTGGACCCCTCTGGATaGCTAGGTTGTTCCTCCTCAGGTGCTGGGGGTATC +
Preference number: 6 (lower is better)
Translates to: LCSSLALLDPSG*LGCSSSGAGGI
Trigger: GATACCCCCAGCACCTGAGGAGGAACAACCTAGCCATCCAGAGGGGTCCAGGAGAGCCAAACTGGAACAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
ENST00000471161.1
ENST00000480421.5
ENST00000487419.1
CDS CAA 72 bp ATGGACCCCTCTGAGGCCATTCGCCTCTGTTCCAGTTaGGCTCTCCTGGACCCCTCTGGATGGCTAGGTTGT +
Preference number: 6 (lower is better)
Translates to: MDPSEAIRLCSS*ALLDPSGWLGC
Trigger: ACAACCTAGCCATCCAGAGGGGTCCAGGAGAGCCAAACTGGAACAGAGGCGAATGGCCTCAGAGGGGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
ENST00000471161.1
ENST00000480421.5
ENST00000487419.1
CDS CAA 90 bp CAACAACCCGAGGCAGCCCATACCCCAGAAACAGCCTGTCAGAAGTaGCCAGCGCTCTGTGTAGCAAGGAATTGCAGATTCCCTCCTCAC +
Preference number: 6 (lower is better)
Translates to: QQPEAAHTPETACQK*PALCVARNCRFPPH
Trigger: GTGAGGAGGGAATCTGCAATTCCTTGCTACACAGAGCGCTGGCAACTTCTGACAGGCTGTTTCTGGGGTATGGGCTGCCTCGGGTTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359333.8
ENST00000482420.1
CDS CAA 90 bp CACAGGCGCACCAAAGCCACAGGGACACAACTGCTTGAGAAACAATaGTACAGGCAAAGGCCCAGCACAATGGCCGGAGGCCCTGATAAC +
Preference number: 6 (lower is better)
Translates to: HRRTKATGTQLLEKQ*YRQRPSTMAGGPDN
Trigger: GTTATCAGGGCCTCCGGCCATTGTGCTGGGCCTTTGCCTGTACAATTGTTTCTCAAGCAGTTGTGTCCCTGTGGCTTTGGTGCGCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359333.8
ENST00000482420.1
CDS CAA 90 bp GAGAAAGTGCACACAGGCGCACCAAAGCCACAGGGACACAACTGCTaGAGAAACAATTGTACAGGCAAAGGCCCAGCACAATGGCCGGAG +
Preference number: 6 (lower is better)
Translates to: EKVHTGAPKPQGHNC*RNNCTGKGPAQWPE
Trigger: CTCCGGCCATTGTGCTGGGCCTTTGCCTGTACAATTGTTTCTCAAGCAGTTGTGTCCCTGTGGCTTTGGTGCGCCTGTGTGCACTTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359333.8
ENST00000482420.1
CDS GCA 72 bp GTGCACACAGGCGCACCAAAGCCACAGGGACACAACTaGTTGAGAAACAATTGTACAGGCAAAGGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: VHTGAPKPQGHN*LRNNCTGKGPA
Trigger: TGCTGGGCCTTTGCCTGTACAATTGTTTCTCAAGCAGTTGTGTCCCTGTGGCTTTGGTGCGCCTGTGTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359333.8
ENST00000482420.1
CDS CAA 72 bp GAGGCAGCCCATACCCCAGAAACAGCCTGTCAGAAGTaGCCAGCGCTCTGTGTAGCAAGGAATTGCAGATTC +
Preference number: 6 (lower is better)
Translates to: EAAHTPETACQK*PALCVARNCRF
Trigger: GAATCTGCAATTCCTTGCTACACAGAGCGCTGGCAACTTCTGACAGGCTGTTTCTGGGGTATGGGCTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359333.8
ENST00000482420.1
CDS CAA 72 bp ACCAAAGCCACAGGGACACAACTGCTTGAGAAACAATaGTACAGGCAAAGGCCCAGCACAATGGCCGGAGGC +
Preference number: 6 (lower is better)
Translates to: TKATGTQLLEKQ*YRQRPSTMAGG
Trigger: GCCTCCGGCCATTGTGCTGGGCCTTTGCCTGTACAATTGTTTCTCAAGCAGTTGTGTCCCTGTGGCTTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359333.8
ENST00000482420.1
CDS CAA 72 bp CACACAGGCGCACCAAAGCCACAGGGACACAACTGCTaGAGAAACAATTGTACAGGCAAAGGCCCAGCACAA +
Preference number: 6 (lower is better)
Translates to: HTGAPKPQGHNC*RNNCTGKGPAQ
Trigger: TTGTGCTGGGCCTTTGCCTGTACAATTGTTTCTCAAGCAGTTGTGTCCCTGTGGCTTTGGTGCGCCTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359333.8
ENST00000482420.1
CDS TCA 72 bp ACACAGGCGCACCAAAGCCACAGGGACACAACTGCTTaGGAAACAATTGTACAGGCAAAGGCCCAGCACAAT +
Preference number: 6 (lower is better)
Translates to: TQAHQSHRDTTA*ETIVQAKAQHN
Trigger: ATTGTGCTGGGCCTTTGCCTGTACAATTGTTTCTCAAGCAGTTGTGTCCCTGTGGCTTTGGTGCGCCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359333.8
ENST00000482420.1
CDS CCA 72 bp AATGAACGAGGTCTGGTGTGGAGAGAAGAGAAATCTTaGGAGAGTCATTTAAGGGGGTGCCCAGTTGTCCTC +
Preference number: 6 (lower is better)
Translates to: NERGLVWREEKS*ESHLRGCPVVL
Trigger: GAGGACAACTGGGCACCCCCTTAAATGACTCTCCCAAGATTTCTCTTCTCTCCACACCAGACCTCGTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359333.8
ENST00000409102.5
ENST00000409244.5
ENST00000409541.5
ENST00000410004.1
ENST00000471161.1
ENST00000487419.1
CDS TCA 72 bp ATGGCCCCTCCCCAGGCTCCTTTGTGTAGAATCAATTaGTTGGACCCACATACACGATCTCATTTGATCCTT +
Preference number: 6 (lower is better)
Translates to: MAPPQAPLCRIN*LDPHTRSHLIL
Trigger: AAGGATCAAATGAGATCGTGTATGTGGGTCCAATCAATTGATTCTACACAAAGGAGCCTGGGGAGGGGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409102.5