RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM135 (Homo sapiens)

Ensembl gene IDs: ENSG00000166575

Ensembl transcript IDs: ENST00000305494.6, ENST00000340353.11, ENST00000525018.5, ENST00000526733.5, ENST00000528861.1, ENST00000529023.5, ENST00000531643.1, ENST00000532959.5

Found 331 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTTGTACTGAGCCAGACCACCAGCATCCCAAGGTCTCCAGGTTATaGATGGCCTGTGGTGGGGTTTCTCAGCCTCCACAATCACATGAG +
Preference number: 1 (lower is better)
Translates to: TCTEPDHQHPKVSRL*MACGGVSQPPQSHE
Trigger: CTCATGTGATTGTGGAGGCTGAGAAACCCCACCACAGGCCATTCATAACCTGGAGACCTTGGGATGCTGGTGGTCTGGCTCAGTACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR CCA 90 bp ATTCACTCACTACTCTGCTGTAGTCCTATGACACTAGCTATATCATaGCCAACTTACTGCCCCACTTCTGTTTCCAGAAGTCACACACAC +
Preference number: 1 (lower is better)
Translates to: IHSLLCCSPMTLAIS*PTYCPTSVSRSHTH
Trigger: GTGTGTGTGACTTCTGGAAACAGAAGTGGGGCAGTAAGTTGGCCATGATATAGCTAGTGTCATAGGACTACAGCAGAGTAGTGAGTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR CCA 90 bp TTGGCCAAAACAGGGTCACATGAACACCTCCGAGTAAAGGCTGGTTaGAAAAGTATCTGGACAAGAAGAAAGGAAAGACATGAAAGGCCT +
Preference number: 1 (lower is better)
Translates to: LAKTGSHEHLRVKAG*KSIWTRRKERHERP
Trigger: AGGCCTTTCATGTCTTTCCTTTCTTCTTGTCCAGATACTTTTCCAACCAGCCTTTACTCGGAGGTGTTCATGTGACCCTGTTTTGGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR CCA 90 bp AATAATTTCTCTGCTCCAAAAACAACATTTGGGCCATTGCTCCAGTaGTCAGTTCCCTTCAGTCCCACAAGAAGCTTCCTAATTAGCACC +
Preference number: 1 (lower is better)
Translates to: NNFSAPKTTFGPLLQ*SVPFSPTRSFLIST
Trigger: GGTGCTAATTAGGAAGCTTCTTGTGGGACTGAAGGGAACTGACCACTGGAGCAATGGCCCAAATGTTGTTTTTGGAGCAGAGAAATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR GCA 90 bp GCATGGATACCACGACATTTATCCAAATGGTATGAGACCCATCTTTaGATCCCTGAAGTAAGAATGGCCACTTCTCCAATTAAATTGCTC +
Preference number: 1 (lower is better)
Translates to: AWIPRHLSKWYETHL*IPEVRMATSPIKLL
Trigger: GAGCAATTTAATTGGAGAAGTGGCCATTCTTACTTCAGGGATGCAAAGATGGGTCTCATACCATTTGGATAAATGTCGTGGTATCCATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
3UTR TCA 90 bp TCTGGACAAGAAGAAAGGAAAGACATGAAAGGCCTAGAACAATTATaGTTCATCCCTGGGGCTAGGCATGTAACTGTCTTAAACAACATC +
Preference number: 1 (lower is better)
Translates to: SGQEERKDMKGLEQL*FIPGARHVTVLNNI
Trigger: GATGTTGTTTAAGACAGTTACATGCCTAGCCCCAGGGATGAATCATAATTGTTCTAGGCCTTTCATGTCTTTCCTTTCTTCTTGTCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR CCA 90 bp TGCTCAAACAACTACACTTTGCAGTCTGTCCCAATGAAATCAAACTaGACTTCTCAATCCACCACTGCAAATTGGTTATTCACTCAACCT +
Preference number: 1 (lower is better)
Translates to: CSNNYTLQSVPMKSN*TSQSTTANWLFTQP
Trigger: AGGTTGAGTGAATAACCAATTTGCAGTGGTGGATTGAGAAGTCCAGTTTGATTTCATTGGGACAGACTGCAAAGTGTAGTTGTTTGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
3UTR TCA 90 bp ATCTACAAGGAGACGAACACTCGAGCACAACAAGAAAATACTGTGTaGCATTTGCTCAGTTTGGATTCCATCAAAAACATACATGTTCAG +
Preference number: 1 (lower is better)
Translates to: IYKETNTRAQQENTV*HLLSLDSIKNIHVQ
Trigger: CTGAACATGTATGTTTTTGATGGAATCCAAACTGAGCAAATGTCACACAGTATTTTCTTGTTGTGCTCGAGTGTTCGTCTCCTTGTAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR TCA 90 bp TGGCACCATTCAGTGGCTCACAGAAGCAGGTTCTTTCTATTTTTCTaGCCTGGCATCTTTAATATGCTGGTTTTTCATGTTTGTACTTTT +
Preference number: 1 (lower is better)
Translates to: WHHSVAHRSRFFLFF*PGIFNMLVFHVCTF
Trigger: AAAAGTACAAACATGAAAAACCAGCATATTAAAGATGCCAGGTCAGAAAAATAGAAAGAACCTGCTTCTGTGAGCCACTGAATGGTGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR GCA 90 bp AGGAGACGAACACTCGAGCACAACAAGAAAATACTGTGTGACATTTaGTCAGTTTGGATTCCATCAAAAACATACATGTTCAGTCTAATA +
Preference number: 1 (lower is better)
Translates to: RRRTLEHNKKILCDI*SVWIPSKTYMFSLI
Trigger: TATTAGACTGAACATGTATGTTTTTGATGGAATCCAAACTGAGCAAATGTCACACAGTATTTTCTTGTTGTGCTCGAGTGTTCGTCTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR CCA 90 bp TCTACAAAGCTAATCATAATGCCAAATTTTGACCAAATGATAAAGTaGCTCTGTTACCATAGTACCAGAGTCTGTCTTTTTGTTGGGTTT +
Preference number: 1 (lower is better)
Translates to: STKLIIMPNFDQMIK*LCYHSTRVCLFVGF
Trigger: AAACCCAACAAAAAGACAGACTCTGGTACTATGGTAACAGAGCCACTTTATCATTTGGTCAAAATTTGGCATTATGATTAGCTTTGTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
3UTR-3UTR TCA 90 bp TCTCCAGGTTATGAATGGCCTGTGGTGGGGTTTCTCAGCCTCCACAATCACATGCCCAAGAGGATCACTTaGGGCCAGGAGTTTAAGACC +
Preference number: 2 (lower is better)
Translates to: SPGYEWPVVGFLSLHNHMPKRIT*GQEFKT
Trigger: GGTCTTAAACTCCTGGCCTCAAGTGATCCTCTTGGG...CATGTGATTGTGGAGGCTGAGAAACCCCACCACAGGCCATTCATAACCTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR TCA 90 bp TATGCCTATGGCCTCTATGCCAAGACCAGGGAACATCCTATTATCCACGGTCTGCCATCTTTGCATCCCTaGAGTAAGAATGGCCACTTC +
Preference number: 2 (lower is better)
Translates to: YAYGLYAKTREHPIIHGLPSLHP*SKNGHF
Trigger: GAAGTGGCCATTCTTACTTCAGGGATGCAAAGATGG...CAGACCGTGGATAATAGGATGTTCCCTGGTCTTGGCATAGAGGCCATAGGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR GCA 90 bp AGCACCAAGGGAGAGGTTGTGACACAGGCAAGTGGACGAAGCTCCCTGAGAGTACTTCTCCAATTAAATTaGTCTACACGAAAGCAGCAC +
Preference number: 2 (lower is better)
Translates to: STKGEVVTQASGRSSLRVLLQLN*STRKQH
Trigger: GTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAG...TACTCTCAGGGAGCTTCGTCCACTTGCCTGTGTCACAACCTCTCCCTTGGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR CCA 90 bp TGCAACTACAGGGCTATTACAAAGTCACCTGAGGCCACTACTTTAAACAGAAACGGGCCATTGCTCCAGTaGTCAGTTCCCTTCAGTCCC +
Preference number: 2 (lower is better)
Translates to: CNYRAITKSPEATTLNRNGPLLQ*SVPFSP
Trigger: GGGACTGAAGGGAACTGACCACTGGAGCAATGGCCC...GTTTCTGTTTAAAGTAGTGGCCTCAGGTGACTTTGTAATAGCCCTGTAGTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR GCA 90 bp TATGCCTATGGCCTCTATGCCAAGACCAGGGAACATCCTATTATCCACGGTCTGTCAATGAGCTATGATTaGACCACTGTACTCCAACCC +
Preference number: 2 (lower is better)
Translates to: YAYGLYAKTREHPIIHGLSMSYD*TTVLQP
Trigger: GGGTTGGAGTACAGTGGTGCAATCATAGCTCATTGA...CAGACCGTGGATAATAGGATGTTCCCTGGTCTTGGCATAGAGGCCATAGGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR CCA 90 bp TCTCCAGGTTATGAATGGCCTGTGGTGGGGTTTCTCAGCCTCCACAATCACATGAAGCAGCACTGTCCGTaGAGAGTTACTTCAAATCTA +
Preference number: 2 (lower is better)
Translates to: SPGYEWPVVGFLSLHNHMKQHCP*RVTSNL
Trigger: TAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTT...CATGTGATTGTGGAGGCTGAGAAACCCCACCACAGGCCATTCATAACCTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR CAA 90 bp CTCTGGGCTAATAATTTCTCTGCTCCAAAAACAACATTTGGGCCATaGCTCCAGTGGTCAGTTCCCTTCAGTCCCACAAGAAGCTTCCTA +
Preference number: 2 (lower is better)
Translates to: LWANNFSAPKTTFGP*LQWSVPFSPTRSFL
Trigger: TAGGAAGCTTCTTGTGGGACTGAAGGGAACTGACCACTGGAGCAATGGCCCAAATGTTGTTTTTGGAGCAGAGAAATTATTAGCCCAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR TCA 90 bp TCTCCAGGTTATGAATGGCCTGTGGTGGGGTTTCTCAGCCTCCACAATCACATGGGGGAAATAATTGCTTaGACCAAGGAATTTGAGGTT +
Preference number: 2 (lower is better)
Translates to: SPGYEWPVVGFLSLHNHMGEIIA*TKEFEV
Trigger: AACCTCAAATTCCTTGGTTCAAGCAATTATTTCCCC...CATGTGATTGTGGAGGCTGAGAAACCCCACCACAGGCCATTCATAACCTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR GCA 90 bp TATGCCTATGGCCTCTATGCCAAGACCAGGGAACATCCTATTATCCACGGTCTGATAGGTTCACTGGGCTaGCAAATAGCCCAATTAACT +
Preference number: 2 (lower is better)
Translates to: YAYGLYAKTREHPIIHGLIGSLG*QIAQLT
Trigger: AGTTAATTGGGCTATTTGGCAGCCCAGTGAACCTAT...CAGACCGTGGATAATAGGATGTTCCCTGGTCTTGGCATAGAGGCCATAGGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR CCA 90 bp CACGGTCTGACAAGATTAGAATGTTATGCTCTGCAGAGGCAGCAGGCTGGGGGTTCCACCACTGCAAATTaGTTATTCACTCAACCTATA +
Preference number: 2 (lower is better)
Translates to: HGLTRLECYALQRQQAGGSTTAN*LFTQPI
Trigger: TATAGGTTGAGTGAATAACCAATTTGCAGTGGTGGA...ACCCCCAGCCTGCTGCCTCTGCAGAGCATAACATTCTAATCTTGTCAGACCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR TCA 90 bp TCTCCAGGTTATGAATGGCCTGTGGTGGGGTTTCTCAGCCTCCACAATCACATGAAATCCATGTACCCGTaGTCCTTTGTAAATCCTAAA +
Preference number: 2 (lower is better)
Translates to: SPGYEWPVVGFLSLHNHMKSMYP*SFVNPK
Trigger: TTTAGGATTTACAAAGGATCACGGGTACATGGATTT...CATGTGATTGTGGAGGCTGAGAAACCCCACCACAGGCCATTCATAACCTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR GCA 90 bp TATGCCTATGGCCTCTATGCCAAGACCAGGGAACATCCTATTATCCACGGTCTGTGTTGGGTTTCTGTTTaGCATAACAACCAAGGATTG +
Preference number: 2 (lower is better)
Translates to: YAYGLYAKTREHPIIHGLCWVSV*HNNQGL
Trigger: CAATCCTTGGTTGTTATGGCAAACAGAAACCCAACA...CAGACCGTGGATAATAGGATGTTCCCTGGTCTTGGCATAGAGGCCATAGGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR GCA 90 bp TCTCCAGGTTATGAATGGCCTGTGGTGGGGTTTCTCAGCCTCCACAATCACATGATACTGTGTGACATTTaGTCAGTTTGGATTCCATCA +
Preference number: 2 (lower is better)
Translates to: SPGYEWPVVGFLSLHNHMILCDI*SVWIPS
Trigger: TGATGGAATCCAAACTGAGCAAATGTCACACAGTAT...CATGTGATTGTGGAGGCTGAGAAACCCCACCACAGGCCATTCATAACCTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR TCA 90 bp CCTTGGACTGAGAATTACACCATCAGTTTCCCTGGTTCCAAGGCTTTTGGACTTCATAAGTTAAACAGCTaGGAGGACACAAACTGCCAA +
Preference number: 2 (lower is better)
Translates to: PWTENYTISFPGSKAFGLHKLNS*EDTNCQ
Trigger: TTGGCAGTTTGTGTCCTCTCAGCTGTTTAACTTATG...AAGTCCAAAAGCCTTGGAACCAGGGAAACTGATGGTGTAATTCTCAGTCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR CAA 90 bp CATCTTTGCATCCCTGAAGTAAGAATGGCCACTTCTCCAATTAAATaGCTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAA +
Preference number: 2 (lower is better)
Translates to: HLCIPEVRMATSPIK*LYTKAALSVESYFK
Trigger: TTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGTGGCCATTCTTACTTCAGGGATGCAAAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
3UTR-3UTR TCA 90 bp AATTGTTCTGGATTTAAAGGCTTCACATACAGAGAAACATCTCCTTCCATATCTCCAAGGGAGAGGTTGTaGCACAGGCAAGTGGACGAA +
Preference number: 2 (lower is better)
Translates to: NCSGFKGFTYRETSPSISPRERL*HRQVDE
Trigger: TTCGTCCACTTGCCTGTGTCACAACCTCTCCCTTGG...AGATATGGAAGGAGATGTTTCTCTGTATGTGAAGCCTTTAAATCCAGAACAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR TCA 90 bp CCTTGGACTGAGAATTACACCATCAGTTTCCCTGGTTCCAAGGCTTTTGGACTTCCACTCATTTTCAGCTaGGTGAAGTATTCTACTATG +
Preference number: 2 (lower is better)
Translates to: PWTENYTISFPGSKAFGLPLIFS*VKYSTM
Trigger: CATAGTAGAATACTTCACTCAGCTGAAAATGAGTGG...AAGTCCAAAAGCCTTGGAACCAGGGAAACTGATGGTGTAATTCTCAGTCCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR TCA 90 bp GCTAGGCATGTAACTGTCTTAAACAACATCAGTGTTCCCTCAGCAAGGAAAAACTTGTTATCACCGTTATaGTCACTCCAGAGCCTCTCA +
Preference number: 2 (lower is better)
Translates to: ARHVTVLNNISVPSARKNLLSPL*SLQSLS
Trigger: TGAGAGGCTCTGGAGTGATCATAACGGTGATAACAA...GTTTTTCCTTGCTGAGGGAACACTGATGTTGTTTAAGACAGTTACATGCCTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR CAA 90 bp ACATTTCAACTTTATCGGATGTGTCCATTTCCATTTGCCCCTAACTaGCCATTAGTACATAGGTTCACTGGGCTGCCAAATAGCCCAATT +
Preference number: 2 (lower is better)
Translates to: TFQLYRMCPFPFAPN*PLVHRFTGLPNSPI
Trigger: AATTGGGCTATTTGGCAGCCCAGTGAACCTATGTACTAATGGCAAGTTAGGGGCAAATGGAAATGGACACATCCGATAAAGTTGAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
3UTR-3UTR TCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCTGTCAGTCACTACAGTaGTCCAGAATCTTATTCTGG +
Preference number: 2 (lower is better)
Translates to: LYTKAALSVESYFKSITFCQSLQ*SRILFW
Trigger: CCAGAATAAGATTCTGGATCACTGTAGTGACTGACA...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
3UTR-3UTR TCA 90 bp AGGAGACGAACACTCGAGCACAACAAGAAAATACTGTGTGACATTTGCTCAGTTAGTCTGAAACCGAAATaGTCCTTTAACAGCATTGCC +
Preference number: 2 (lower is better)
Translates to: RRRTLEHNKKILCDICSVSLKPK*SFNSIA
Trigger: GGCAATGCTGTTAAAGGATCATTTCGGTTTCAGACT...AACTGAGCAAATGTCACACAGTATTTTCTTGTTGTGCTCGAGTGTTCGTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR GCA 90 bp AGGAGACGAACACTCGAGCACAACAAGAAAATACTGTGTGACATTTGCTCAGTTCACAAACTGCCAACTTaGCAAGACTACTTTGTTCCA +
Preference number: 2 (lower is better)
Translates to: RRRTLEHNKKILCDICSVHKLPT*QDYFVP
Trigger: TGGAACAAAGTAGTCTTGGCAAGTTGGCAGTTTGTG...AACTGAGCAAATGTCACACAGTATTTTCTTGTTGTGCTCGAGTGTTCGTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR GCA 90 bp CCTTGGACTGAGAATTACACCATCAGTTTCCCTGGTTCCAAGGCTTTTGGACTTTTCTCAATCCACCACTaGAAATTGGTTATTCACTCA +
Preference number: 2 (lower is better)
Translates to: PWTENYTISFPGSKAFGLFSIHH*KLVIHS
Trigger: TGAGTGAATAACCAATTTGCAGTGGTGGATTGAGAA...AAGTCCAAAAGCCTTGGAACCAGGGAAACTGATGGTGTAATTCTCAGTCCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR GCA 90 bp TGCAACTACAGGGCTATTACAAAGTCACCTGAGGCCACTACTTTAAACAGAAACTACCACTGCCCCAAATaGACGGTTTTTCAATCTCAA +
Preference number: 2 (lower is better)
Translates to: CNYRAITKSPEATTLNRNYHCPK*TVFQSQ
Trigger: TTGAGATTGAAAAACCGTGCATTTGGGGCAGTGGTA...GTTTCTGTTTAAAGTAGTGGCCTCAGGTGACTTTGTAATAGCCCTGTAGTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR CCA 90 bp GCTAGGCATGTAACTGTCTTAAACAACATCAGTGTTCCCTCAGCAAGGAAAAACTCTGTGGTAATATACTaGGATTTTCAGGTCTGCTGG +
Preference number: 2 (lower is better)
Translates to: ARHVTVLNNISVPSARKNSVVIY*DFQVCW
Trigger: CCAGCAGACCTGAAAATCCCAGTATATTACCACAGA...GTTTTTCCTTGCTGAGGGAACACTGATGTTGTTTAAGACAGTTACATGCCTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR TCA 90 bp GCTAGGCATGTAACTGTCTTAAACAACATCAGTGTTCCCTCAGCAAGGAAAAACCTTAAAAGGTTGCAATaGAGTCCAAGGAGACTAGTT +
Preference number: 2 (lower is better)
Translates to: ARHVTVLNNISVPSARKNLKRLQ*SPRRLV
Trigger: AACTAGTCTCCTTGGACTTCATTGCAACCTTTTAAG...GTTTTTCCTTGCTGAGGGAACACTGATGTTGTTTAAGACAGTTACATGCCTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR GCA 90 bp GCTAGGCATGTAACTGTCTTAAACAACATCAGTGTTCCCTCAGCAAGGAAAAACCAACACAAGTTCTACTaGATAATTTGCACTGGCCTA +
Preference number: 2 (lower is better)
Translates to: ARHVTVLNNISVPSARKNQHKFY*IICTGL
Trigger: TAGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTG...GTTTTTCCTTGCTGAGGGAACACTGATGTTGTTTAAGACAGTTACATGCCTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR CCA 90 bp TATCCCTCTCATATCTCTCTCTATGTATCTCTCTATCCCTATTGTTCTGCCTCTCATGCTTTAAACCTTTaGCACTATAGCTTCAGGGTC +
Preference number: 2 (lower is better)
Translates to: YPSHISLYVSLYPYCSASHALNL*HYSFRV
Trigger: GACCCTGAAGCTATAGTGCCAAAGGTTTAAAGCATG...AGAGGCAGAACAATAGGGATAGAGAGATACATAGAGAGAGATATGAGAGGGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR TCA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTTTTATCCAAATGGTATaGGACCCATCTTTGCATCCC +
Preference number: 2 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPFIQMV*DPSLHP
Trigger: GGGATGCAAAGATGGGTCTCATACCATTTGGATAAA...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
3UTR-3UTR GCA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTCACAAACTGCCAACTTaGCAAGACTACTTTGTTCCA +
Preference number: 2 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPHKLPT*QDYFVP
Trigger: TGGAACAAAGTAGTCTTGGCAAGTTGGCAGTTTGTG...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
3UTR-3UTR GCA 90 bp TATCCCTCTCATATCTCTCTCTATGTATCTCTCTATCCCTATTGTTCTGCCTCTCTCAAAATGCTCAAATaGAGATGGTTAATGGCACCA +
Preference number: 2 (lower is better)
Translates to: YPSHISLYVSLYPYCSASLKMLK*RWLMAP
Trigger: TGGTGCCATTAACCATCTGCATTTGAGCATTTTGAG...AGAGGCAGAACAATAGGGATAGAGAGATACATAGAGAGAGATATGAGAGGGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR CCA 90 bp AGGAGACGAACACTCGAGCACAACAAGAAAATACTGTGTGACATTTGCTCAGTTATCAGCAGGACTTTATaGTGTCACCTCTTTATTCTA +
Preference number: 2 (lower is better)
Translates to: RRRTLEHNKKILCDICSVISRTL*CHLFIL
Trigger: TAGAATAAAGAGGTGACACCATAAAGTCCTGCTGAT...AACTGAGCAAATGTCACACAGTATTTTCTTGTTGTGCTCGAGTGTTCGTCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR TCA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGTGTCAGTCACTACAGTaGTCCAGAATCTTATTCTGG +
Preference number: 2 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWCQSLQ*SRILFW
Trigger: CCAGAATAAGATTCTGGATCACTGTAGTGACTGACA...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
3UTR-3UTR TCA 90 bp TATCCCTCTCATATCTCTCTCTATGTATCTCTCTATCCCTATTGTTCTGCCTCTCAAGAAAATACTGTGTaGCATTTGCTCAGTTTGGAT +
Preference number: 2 (lower is better)
Translates to: YPSHISLYVSLYPYCSASQENTV*HLLSLD
Trigger: ATCCAAACTGAGCAAATGTCACACAGTATTTTCTTG...AGAGGCAGAACAATAGGGATAGAGAGATACATAGAGAGAGATATGAGAGGGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR CCA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTCGACATTTATCCAAATaGTATGAGACCCATCTTTGC +
Preference number: 2 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPRHLSK*YETHLC
Trigger: GCAAAGATGGGTCTCATACCATTTGGATAAATGTCG...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
3UTR CAA 90 bp TTCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTaGCAGTCTGTCCCAATGAAATCAAACTGGACTTCTCAATCCACC +
Preference number: 2 (lower is better)
Translates to: FKNTKFLCVCSNNYT*QSVPMKSNWTSQST
Trigger: GGTGGATTGAGAAGTCCAGTTTGATTTCATTGGGACAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
3UTR-3UTR CCA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTTCCAGAATCTTATTCTaGCTATGGAGGAAGCTTAAT +
Preference number: 2 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPSRILF*LWRKLN
Trigger: ATTAAGCTTCCTCCATAGCCAGAATAAGATTCTGGA...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
3UTR-3UTR GCA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGTATGAGACCCATCTTTaGATCCCTGAAGTAAGAATG +
Preference number: 2 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLYETHL*IPEVRM
Trigger: CATTCTTACTTCAGGGATGCAAAGATGGGTCTCATA...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
3UTR-3UTR GCA 90 bp AATTGTTCTGGATTTAAAGGCTTCACATACAGAGAAACATCTCCTTCCATATCTATTCACTCACTACTCTaGTGTAGTCCTATGACACTA +
Preference number: 2 (lower is better)
Translates to: NCSGFKGFTYRETSPSISIHSLL*CSPMTL
Trigger: TAGTGTCATAGGACTACAGCAGAGTAGTGAGTGAAT...AGATATGGAAGGAGATGTTTCTCTGTATGTGAAGCCTTTAAATCCAGAACAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR CCA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGTCCAGAATCTTATTCTaGCTATGGAGGAAGCTTAAT +
Preference number: 2 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWSRILF*LWRKLN
Trigger: ATTAAGCTTCCTCCATAGCCAGAATAAGATTCTGGA...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
3UTR-3UTR CCA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGGACCAAATGATAAAGTaGCTCTGTTACCATAGTACC +
Preference number: 2 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLDQMIK*LCYHST
Trigger: GGTACTATGGTAACAGAGCCACTTTATCATTTGGTC...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
3UTR-3UTR TCA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGAAATCCATGTACCCGTaGTCCTTTGTAAATCCTAAA +
Preference number: 2 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLKSMYP*SFVNPK
Trigger: TTTAGGATTTACAAAGGATCACGGGTACATGGATTT...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
3UTR-3UTR CCA 90 bp AATTGTTCTGGATTTAAAGGCTTCACATACAGAGAAACATCTCCTTCCATATCTAGTCTGTCTTTTTGTTaGGTTTCTGTTTGCCATAAC +
Preference number: 2 (lower is better)
Translates to: NCSGFKGFTYRETSPSISSLSFC*VSVCHN
Trigger: GTTATGGCAAACAGAAACCCAACAAAAAGACAGACT...AGATATGGAAGGAGATGTTTCTCTGTATGTGAAGCCTTTAAATCCAGAACAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR CCA 72 bp CAGACCACCAGCATCCCAAGGTCTCCAGGTTATGAATaGCCTGTGGTGGGGTTTCTCAGCCTCCACAATCAC +
Preference number: 3 (lower is better)
Translates to: QTTSIPRSPGYE*PVVGFLSLHNH
Trigger: GTGATTGTGGAGGCTGAGAAACCCCACCACAGGCCATTCATAACCTGGAGACCTTGGGATGCTGGTGGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR TCA 72 bp GGCCTGTGGTGGGGTTTCTCAGCCTCCACAATCACATaGGCCAACTCCCTTAATCCCCTCTCATATCTCTCT +
Preference number: 3 (lower is better)
Translates to: GLWWGFSASTIT*ANSLNPLSYLS
Trigger: AGAGAGATATGAGAGGGGATTAAGGGAGTTGGCTCATGTGATTGTGGAGGCTGAGAAACCCCACCACAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR CCA 72 bp GGGTGTTTCCAGAGGAGATTGGCATGTGAGTTAGCGTaGACTAGGCAGAGAAGATCTGCCCTCAATATGGGC +
Preference number: 3 (lower is better)
Translates to: GCFQRRLACELA*TRQRRSALNMG
Trigger: GCCCATATTGAGGGCAGATCTTCTCTGCCTAGTCCACGCTAACTCACATGCCAATCTCCTCTGGAAACACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR CAA 90 bp TATGCCTATGGCCTCTATGCCAAGACCAGGGAACATCCTATTATCCACGGTCTGACAACATTTGGGCCATaGCTCCAGTGGTCAGTTCCC +
Preference number: 3 (lower is better)
Translates to: YAYGLYAKTREHPIIHGLTTFGP*LQWSVP
Trigger: GGGAACTGACCACTGGAGCAATGGCCCAAATGTTGT...CAGACCGTGGATAATAGGATGTTCCCTGGTCTTGGCATAGAGGCCATAGGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR CAA 90 bp CCTTGGACTGAGAATTACACCATCAGTTTCCCTGGTTCCAAGGCTTTTGGACTTGCCCTGATGTCCCTGTaGGTGACCAGATGGTATGTG +
Preference number: 3 (lower is better)
Translates to: PWTENYTISFPGSKAFGLALMSL*VTRWYV
Trigger: CACATACCATCTGGTCACCAACAGGGACATCAGGGC...AAGTCCAAAAGCCTTGGAACCAGGGAAACTGATGGTGTAATTCTCAGTCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR CCA 72 bp CCCACCCCCAGGTTCTCAGACTTGAAAATTCAGCCTTaGACTGAGAATTACACCATCAGTTTCCCTGGTTCC +
Preference number: 3 (lower is better)
Translates to: PTPRFSDLKIQP*TENYTISFPGS
Trigger: GGAACCAGGGAAACTGATGGTGTAATTCTCAGTCCAAGGCTGAATTTTCAAGTCTGAGAACCTGGGGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR CAA 90 bp TCTCCAGGTTATGAATGGCCTGTGGTGGGGTTTCTCAGCCTCCACAATCACATGCCAGAGTCTGTCTTTTaGTTGGGTTTCTGTTTGCCA +
Preference number: 3 (lower is better)
Translates to: SPGYEWPVVGFLSLHNHMPESVF*LGFCLP
Trigger: TGGCAAACAGAAACCCAACAAAAAGACAGACTCTGG...CATGTGATTGTGGAGGCTGAGAAACCCCACCACAGGCCATTCATAACCTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR TCA 72 bp GGTTCTGAAGAGAGCCTTAGTGCTATCCCTGAGCAGTaGCAGGCTATCAAAAACTGCCGACTCAGATTCAGA +
Preference number: 3 (lower is better)
Translates to: GSEESLSAIPEQ*QAIKNCRLRFR
Trigger: TCTGAATCTGAGTCGGCAGTTTTTGATAGCCTGTCACTGCTCAGGGATAGCACTAAGGCTCTCTTCAGAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR TCA 72 bp TATCACTCCCCCATCCCACCCCCAGGTTCTCAGACTTaGAAATTCAGCCTTGGACTGAGAATTACACCATCA +
Preference number: 3 (lower is better)
Translates to: YHSPIPPPGSQT*KFSLGLRITPS
Trigger: TGATGGTGTAATTCTCAGTCCAAGGCTGAATTTTCAAGTCTGAGAACCTGGGGGTGGGATGGGGGAGTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR CAA 90 bp TCTCCAGGTTATGAATGGCCTGTGGTGGGGTTTCTCAGCCTCCACAATCACATGTCAAACAACTACACTTaGCAGTCTGTCCCAATGAAA +
Preference number: 3 (lower is better)
Translates to: SPGYEWPVVGFLSLHNHMSNNYT*QSVPMK
Trigger: TTTCATTGGGACAGACTGCAAAGTGTAGTTGTTTGA...CATGTGATTGTGGAGGCTGAGAAACCCCACCACAGGCCATTCATAACCTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR CAA 90 bp CCTTGGACTGAGAATTACACCATCAGTTTCCCTGGTTCCAAGGCTTTTGGACTTCCGAGTAAAGGCTGGTaGGAAAAGTATCTGGACAAG +
Preference number: 3 (lower is better)
Translates to: PWTENYTISFPGSKAFGLPSKGW*EKYLDK
Trigger: CTTGTCCAGATACTTTTCCAACCAGCCTTTACTCGG...AAGTCCAAAAGCCTTGGAACCAGGGAAACTGATGGTGTAATTCTCAGTCCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR CAA 90 bp TCTCCAGGTTATGAATGGCCTGTGGTGGGGTTTCTCAGCCTCCACAATCACATGTCAATCTTTACTCGGTaGCTACTAGTTCTAGGATTT +
Preference number: 3 (lower is better)
Translates to: SPGYEWPVVGFLSLHNHMSIFTR*LLVLGF
Trigger: AAATCCTAGAACTAGTAGCAACCGAGTAAAGATTGA...CATGTGATTGTGGAGGCTGAGAAACCCCACCACAGGCCATTCATAACCTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR TCA 72 bp GTTATCACCGTTATGATCACTCCAGAGCCTCTCACTTaGACGGCTGGCTTAAAAGGTTGCAATGAAGTCCAA +
Preference number: 3 (lower is better)
Translates to: VITVMITPEPLT*TAGLKGCNEVQ
Trigger: TTGGACTTCATTGCAACCTTTTAAGCCAGCCGTTCAAGTGAGAGGCTCTGGAGTGATCATAACGGTGATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR TCA 72 bp TCTCTGGAAATGTTTACTCCATTGTTATCACCGTTATaGTCACTCCAGAGCCTCTCACTTGAACGGCTGGCT +
Preference number: 3 (lower is better)
Translates to: SLEMFTPLLSPL*SLQSLSLERLA
Trigger: AGCCAGCCGTTCAAGTGAGAGGCTCTGGAGTGATCATAACGGTGATAACAATGGAGTAAACATTTCCAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR CCA 72 bp CTACTCTGCTGTAGTCCTATGACACTAGCTATATCATaGCCAACTTACTGCCCCACTTCTGTTTCCAGAAGT +
Preference number: 3 (lower is better)
Translates to: LLCCSPMTLAIS*PTYCPTSVSRS
Trigger: ACTTCTGGAAACAGAAGTGGGGCAGTAAGTTGGCCATGATATAGCTAGTGTCATAGGACTACAGCAGAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR CAA 90 bp TATGCCTATGGCCTCTATGCCAAGACCAGGGAACATCCTATTATCCACGGTCTGGTTCTACTGCATAATTaGCACTGGCCTAAAAACTTT +
Preference number: 3 (lower is better)
Translates to: YAYGLYAKTREHPIIHGLVLLHN*HWPKNF
Trigger: AAAGTTTTTAGGCCAGTGCAAATTATGCAGTAGAAC...CAGACCGTGGATAATAGGATGTTCCCTGGTCTTGGCATAGAGGCCATAGGCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR CAA 90 bp TATGCCTATGGCCTCTATGCCAAGACCAGGGAACATCCTATTATCCACGGTCTGGTACCAACCATCGTTTaGATTCCAGTGAATAAAAAG +
Preference number: 3 (lower is better)
Translates to: YAYGLYAKTREHPIIHGLVPTIV*IPVNKK
Trigger: CTTTTTATTCACTGGAATCAAAACGATGGTTGGTAC...CAGACCGTGGATAATAGGATGTTCCCTGGTCTTGGCATAGAGGCCATAGGCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR CCA 72 bp GACCAACCACAGAATGTACTTCATGCTTTAAACCTTTaGCACTATAGCTTCAGGGTCCTCTTAGGTGACCAA +
Preference number: 3 (lower is better)
Translates to: DQPQNVLHALNL*HYSFRVLLGDQ
Trigger: TTGGTCACCTAAGAGGACCCTGAAGCTATAGTGCCAAAGGTTTAAAGCATGAAGTACATTCTGTGGTTGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR GCA 72 bp CCACGACATTTATCCAAATGGTATGAGACCCATCTTTaGATCCCTGAAGTAAGAATGGCCACTTCTCCAATT +
Preference number: 3 (lower is better)
Translates to: PRHLSKWYETHL*IPEVRMATSPI
Trigger: AATTGGAGAAGTGGCCATTCTTACTTCAGGGATGCAAAGATGGGTCTCATACCATTTGGATAAATGTCGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
3UTR-3UTR CAA 90 bp TATCCCTCTCATATCTCTCTCTATGTATCTCTCTATCCCTATTGTTCTGCCTCTGGGTCATCTCAGTCCTaGACACTCCTTTCTTTGTTA +
Preference number: 3 (lower is better)
Translates to: YPSHISLYVSLYPYCSASGSSQS*TLLSLL
Trigger: TAACAAAGAAAGGAGTGTCAAGGACTGAGATGACCC...AGAGGCAGAACAATAGGGATAGAGAGATACATAGAGAGAGATATGAGAGGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR CAA 90 bp CCTTGGACTGAGAATTACACCATCAGTTTCCCTGGTTCCAAGGCTTTTGGACTTTTCCATTACATTTTATaGGCCAAAACAGGGTCACAT +
Preference number: 3 (lower is better)
Translates to: PWTENYTISFPGSKAFGLFHYIL*AKTGSH
Trigger: ATGTGACCCTGTTTTGGCCAATAAAATGTAATGGAA...AAGTCCAAAAGCCTTGGAACCAGGGAAACTGATGGTGTAATTCTCAGTCCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR CCA 72 bp AATGCTCAAATGCAGATGGTTAATGGCACCATTCAGTaGCTCACAGAAGCAGGTTCTTTCTATTTTTCTGAC +
Preference number: 3 (lower is better)
Translates to: NAQMQMVNGTIQ*LTEAGSFYFSD
Trigger: GTCAGAAAAATAGAAAGAACCTGCTTCTGTGAGCCACTGAATGGTGCCATTAACCATCTGCATTTGAGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR CAA 90 bp GCTAGGCATGTAACTGTCTTAAACAACATCAGTGTTCCCTCAGCAAGGAAAAACGATCCTTTAACAGCATaGCCAAATAAACAGGTCAGT +
Preference number: 3 (lower is better)
Translates to: ARHVTVLNNISVPSARKNDPLTA*PNKQVS
Trigger: ACTGACCTGTTTATTTGGCAATGCTGTTAAAGGATC...GTTTTTCCTTGCTGAGGGAACACTGATGTTGTTTAAGACAGTTACATGCCTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR CCA 72 bp AACTACACTTTGCAGTCTGTCCCAATGAAATCAAACTaGACTTCTCAATCCACCACTGCAAATTGGTTATTC +
Preference number: 3 (lower is better)
Translates to: NYTLQSVPMKSN*TSQSTTANWLF
Trigger: GAATAACCAATTTGCAGTGGTGGATTGAGAAGTCCAGTTTGATTTCATTGGGACAGACTGCAAAGTGTAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
3UTR-3UTR CAA 90 bp AATTGTTCTGGATTTAAAGGCTTCACATACAGAGAAACATCTCCTTCCATATCTCCATTTGCCCCTAACTaGCCATTAGTACATAGGTTC +
Preference number: 3 (lower is better)
Translates to: NCSGFKGFTYRETSPSISPFAPN*PLVHRF
Trigger: GAACCTATGTACTAATGGCAAGTTAGGGGCAAATGG...AGATATGGAAGGAGATGTTTCTCTGTATGTGAAGCCTTTAAATCCAGAACAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR TCA 72 bp GAGACGAACACTCGAGCACAACAAGAAAATACTGTGTaGCATTTGCTCAGTTTGGATTCCATCAAAAACATA +
Preference number: 3 (lower is better)
Translates to: ETNTRAQQENTV*HLLSLDSIKNI
Trigger: TATGTTTTTGATGGAATCCAAACTGAGCAAATGTCACACAGTATTTTCTTGTTGTGCTCGAGTGTTCGTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR GCA 72 bp CCCAATGAAATCAAACTGGACTTCTCAATCCACCACTaGAAATTGGTTATTCACTCAACCTATACATTCATC +
Preference number: 3 (lower is better)
Translates to: PNEIKLDFSIHH*KLVIHSTYTFI
Trigger: GATGAATGTATAGGTTGAGTGAATAACCAATTTGCAGTGGTGGATTGAGAAGTCCAGTTTGATTTCATTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
3UTR GCA 72 bp ACACTCGAGCACAACAAGAAAATACTGTGTGACATTTaGTCAGTTTGGATTCCATCAAAAACATACATGTTC +
Preference number: 3 (lower is better)
Translates to: TLEHNKKILCDI*SVWIPSKTYMF
Trigger: GAACATGTATGTTTTTGATGGAATCCAAACTGAGCAAATGTCACACAGTATTTTCTTGTTGTGCTCGAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR CAA 90 bp AATTGTTCTGGATTTAAAGGCTTCACATACAGAGAAACATCTCCTTCCATATCTACTTCTCCAATTAAATaGCTCTACACGAAAGCAGCA +
Preference number: 3 (lower is better)
Translates to: NCSGFKGFTYRETSPSISTSPIK*LYTKAA
Trigger: TGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGT...AGATATGGAAGGAGATGTTTCTCTGTATGTGAAGCCTTTAAATCCAGAACAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR CAA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGGATCCTTTAACAGCATaGCCAAATAAACAGGTCAGT +
Preference number: 3 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLDPLTA*PNKQVS
Trigger: ACTGACCTGTTTATTTGGCAATGCTGTTAAAGGATC...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
3UTR-3UTR CAA 90 bp AATTGTTCTGGATTTAAAGGCTTCACATACAGAGAAACATCTCCTTCCATATCTTATTCAAGAAGAAGGTaGGAGAACCTGAATGGAATT +
Preference number: 3 (lower is better)
Translates to: NCSGFKGFTYRETSPSISYSRRR*ENLNGI
Trigger: AATTCCATTCAGGTTCTCCAACCTTCTTCTTGAATA...AGATATGGAAGGAGATGTTTCTCTGTATGTGAAGCCTTTAAATCCAGAACAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR-3UTR CAA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGGTACCAACCATCGTTTaGATTCCAGTGAATAAAAAG +
Preference number: 3 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLVPTIV*IPVNKK
Trigger: CTTTTTATTCACTGGAATCAAAACGATGGTTGGTAC...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
3UTR GCA 72 bp TATATTGGGTACAATGCACACTATTCTGGTGACAGGTaGACTAAAATTTCAGACTTCACCAATATACAATTC +
Preference number: 3 (lower is better)
Translates to: YIGYNAHYSGDR*TKISDFTNIQF
Trigger: GAATTGTATATTGGTGAAGTCTGAAATTTTAGTGCACCTGTCACCAGAATAGTGTGCATTGTACCCAATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR CCA 72 bp ATAGAAAATCAAATTCTGTATGTTCTCAACTGTAAGTaGGAGCTAAGCTATGGATACACAAGGGTATACAGA +
Preference number: 3 (lower is better)
Translates to: IENQILYVLNCK*ELSYGYTRVYR
Trigger: TCTGTATACCCTTGTGTATCCATAGCTTAGCTCCCACTTACAGTTGAGAACATACAGAATTTGATTTTCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR TCA 72 bp TTTGTTGGGTTTCTGTTTGCCATAACAACCAAGGATTaGATTACATTTAAGCAGAAGTATACAAGGCTTGAT +
Preference number: 3 (lower is better)
Translates to: FVGFLFAITTKD*ITFKQKYTRLD
Trigger: ATCAAGCCTTGTATACTTCTGCTTAAATGTAATTCAATCCTTGGTTGTTATGGCAAACAGAAACCCAACAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp TATGCCTATGGCCTCTATGCCAAGACCAGGGAACATCCTATTATCCACGGTCTGCCAGGGCGCCCCCGGTaGTCTGCAGGAAGGAGACCC +
Preference number: 4 (lower is better)
Translates to: YAYGLYAKTREHPIIHGLPGRPR*SAGRRP
Trigger: GGGTCTCCTTCCTGCAGATCACCGGGGGCGCCCTGG...CAGACCGTGGATAATAGGATGTTCCCTGGTCTTGGCATAGAGGCCATAGGCATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp AGCACCAAGGGAGAGGTTGTGACACAGGCAAGTGGACGAAGCTCCCTGAGAGTAACCGTGGCTCACACCTaGAATCCCAGAGTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: STKGEVVTQASGRSSLRVTVAHT*NPRVPG
Trigger: TCCCGGGACTCTGGGATTCCAGGTGTGAGCCACGGT...TACTCTCAGGGAGCTTCGTCCACTTGCCTGTGTCACAACCTCTCCCTTGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp ACTTCTCCAATTAAATTGCTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACGGAGAGCCTGAGCCCTaGAGGGAGGGGCGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: TSPIKLLYTKAALSVESYGEPEP*REGRES
Trigger: GCTCTCGCGCCCCTCCCTGCAGGGCTCAGGCTCTCC...GTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCGGAGAGCCTGAGCCCTaGAGGGAGGGGCGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: LYTKAALSVESYFKSITFGEPEP*REGRES
Trigger: GCTCTCGCGCCCCTCCCTGCAGGGCTCAGGCTCTCC...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp AGCACCAAGGGAGAGGTTGTGACACAGGCAAGTGGACGAAGCTCCCTGAGAGTATGCCTATGGCCTCTATaGCAAGACCAGGGAACATCC +
Preference number: 4 (lower is better)
Translates to: STKGEVVTQASGRSSLRVCLWPL*QDQGTS
Trigger: GGATGTTCCCTGGTCTTGGCATAGAGGCCATAGGCA...TACTCTCAGGGAGCTTCGTCCACTTGCCTGTGTCACAACCTCTCCCTTGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp AGCACCAAGGGAGAGGTTGTGACACAGGCAAGTGGACGAAGCTCCCTGAGAGTACTTCTCTCTCTCCCCTaGAGCAGGGATACACTCTTC +
Preference number: 4 (lower is better)
Translates to: STKGEVVTQASGRSSLRVLLSLP*SRDTLF
Trigger: GAAGAGTGTATCCCTGCTGCAGGGGAGAGAGAGAAG...TACTCTCAGGGAGCTTCGTCCACTTGCCTGTGTCACAACCTCTCCCTTGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp TCTCCAGGTTATGAATGGCCTGTGGTGGGGTTTCTCAGCCTCCACAATCACATGCCAAGGGAGAGGTTGTaGCACAGGCAAGTGGACGAA +
Preference number: 4 (lower is better)
Translates to: SPGYEWPVVGFLSLHNHMPRERL*HRQVDE
Trigger: TTCGTCCACTTGCCTGTGTCACAACCTCTCCCTTGG...CATGTGATTGTGGAGGCTGAGAAACCCCACCACAGGCCATTCATAACCTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp AGCACCAAGGGAGAGGTTGTGACACAGGCAAGTGGACGAAGCTCCCTGAGAGTAAATGGCCACATAAGATaGTGGCAGAGCGGCACCAAA +
Preference number: 4 (lower is better)
Translates to: STKGEVVTQASGRSSLRVNGHIR*WQSGTK
Trigger: TTTGGTGCCGCTCTGCCAGCATCTTATGTGGCCATT...TACTCTCAGGGAGCTTCGTCCACTTGCCTGTGTCACAACCTCTCCCTTGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp CACGGTCTGACAAGATTAGAATGTTATGCTCTGCAGAGGCAGCAGGCTGGGGGTGTTATGAATGGCCTGTaGTGGGGTTTCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: HGLTRLECYALQRQQAGGVMNGL*WGFSAS
Trigger: GGAGGCTGAGAAACCCCACCACAGGCCATTCATAAC...ACCCCCAGCCTGCTGCCTCTGCAGAGCATAACATTCTAATCTTGTCAGACCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTCCAGGGCGCCCCCGGTaGTCTGCAGGAAGGAGACCC +
Preference number: 4 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPPGRPR*SAGRRP
Trigger: GGGTCTCCTTCCTGCAGATCACCGGGGGCGCCCTGG...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp AGCACCAAGGGAGAGGTTGTGACACAGGCAAGTGGACGAAGCTCCCTGAGAGTAAAGTCTGAACTTCCATaGCAGCTGCCTGGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: STKGEVVTQASGRSSLRVKSELP*QLPGSK
Trigger: TTTGCTTCCAGGCAGCTGTCATGGAAGTTCAGACTT...TACTCTCAGGGAGCTTCGTCCACTTGCCTGTGTCACAACCTCTCCCTTGGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp CACGGTCTGACAAGATTAGAATGTTATGCTCTGCAGAGGCAGCAGGCTGGGGGTGATGGTCTCAAAGTCTaGACTTCCATGACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: HGLTRLECYALQRQQAGGDGLKV*TSMTAA
Trigger: GGCAGCTGTCATGGAAGTTCAGACTTTGAGACCATC...ACCCCCAGCCTGCTGCCTCTGCAGAGCATAACATTCTAATCTTGTCAGACCGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp CACGGTCTGACAAGATTAGAATGTTATGCTCTGCAGAGGCAGCAGGCTGGGGGTCCATCTTTGCATCCCTaGAGTAAGAATGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: HGLTRLECYALQRQQAGGPSLHP*SKNGHF
Trigger: GAAGTGGCCATTCTTACTTCAGGGATGCAAAGATGG...ACCCCCAGCCTGCTGCCTCTGCAGAGCATAACATTCTAATCTTGTCAGACCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp AGCACCAAGGGAGAGGTTGTGACACAGGCAAGTGGACGAAGCTCCCTGAGAGTATTTCCGGAGAATTGCTaGAATCAAGTACAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: STKGEVVTQASGRSSLRVFPENC*NQVQRS
Trigger: GCTCCTCTGTACTTGATTGCAGCAATTCTCCGGAAA...TACTCTCAGGGAGCTTCGTCCACTTGCCTGTGTCACAACCTCTCCCTTGGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp TCTCCAGGTTATGAATGGCCTGTGGTGGGGTTTCTCAGCCTCCACAATCACATGTGGCCATATAAATTGTaGGCAGCCCTCTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SPGYEWPVVGFLSLHNHMWPYKL*AALSCF
Trigger: AAAGCAGGAGAGGGCTGCTCACAATTTATATGGCCA...CATGTGATTGTGGAGGCTGAGAAACCCCACCACAGGCCATTCATAACCTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp TGCAACTACAGGGCTATTACAAAGTCACCTGAGGCCACTACTTTAAACAGAAACACCCGGCAGGAAGGGTaGCAAGTGTGGCCGATCTCA +
Preference number: 4 (lower is better)
Translates to: CNYRAITKSPEATTLNRNTRQEG*QVWPIS
Trigger: TGAGATCGGCCACACTTGGCACCCTTCCTGCCGGGT...GTTTCTGTTTAAAGTAGTGGCCTCAGGTGACTTTGTAATAGCCCTGTAGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp AGCACCAAGGGAGAGGTTGTGACACAGGCAAGTGGACGAAGCTCCCTGAGAGTATACCACTGCCCCAAATaGACGGTTTTTCAATCTCAA +
Preference number: 4 (lower is better)
Translates to: STKGEVVTQASGRSSLRVYHCPK*TVFQSQ
Trigger: TTGAGATTGAAAAACCGTGCATTTGGGGCAGTGGTA...TACTCTCAGGGAGCTTCGTCCACTTGCCTGTGTCACAACCTCTCCCTTGGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp CACGGTCTGACAAGATTAGAATGTTATGCTCTGCAGAGGCAGCAGGCTGGGGGTATTGTTCTGCCTCTCTaGGAAACCCTGACTGATACA +
Preference number: 4 (lower is better)
Translates to: HGLTRLECYALQRQQAGGIVLPL*ETLTDT
Trigger: TGTATCAGTCAGGGTTTCCCAGAGAGGCAGAACAAT...ACCCCCAGCCTGCTGCCTCTGCAGAGCATAACATTCTAATCTTGTCAGACCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp AGCACCAAGGGAGAGGTTGTGACACAGGCAAGTGGACGAAGCTCCCTGAGAGTAAATTCCAGAGTCAAGTaGTGTTACGGGGTTTTAAGA +
Preference number: 4 (lower is better)
Translates to: STKGEVVTQASGRSSLRVNSRVK*CYGVLR
Trigger: TCTTAAAACCCCGTAACATCACTTGACTCTGGAATT...TACTCTCAGGGAGCTTCGTCCACTTGCCTGTGTCACAACCTCTCCCTTGGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp TCTCCAGGTTATGAATGGCCTGTGGTGGGGTTTCTCAGCCTCCACAATCACATGAAACAGATGCCTAAATaGAGAAGGGATTCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SPGYEWPVVGFLSLHNHMKQMPK*RRDSEA
Trigger: TGCCTCCGAATCCCTTCTGCATTTAGGCATCTGTTT...CATGTGATTGTGGAGGCTGAGAAACCCCACCACAGGCCATTCATAACCTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp GCTAGGCATGTAACTGTCTTAAACAACATCAGTGTTCCCTCAGCAAGGAAAAACGGGCCATTGCTCCAGTaGTCAGTTCCCTTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: ARHVTVLNNISVPSARKNGPLLQ*SVPFSP
Trigger: GGGACTGAAGGGAACTGACCACTGGAGCAATGGCCC...GTTTTTCCTTGCTGAGGGAACACTGATGTTGTTTAAGACAGTTACATGCCTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp TATGCCTATGGCCTCTATGCCAAGACCAGGGAACATCCTATTATCCACGGTCTGGGTAAGGCATTATTTTaGGGTGTGTCTGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: YAYGLYAKTREHPIIHGLGKALF*GVSVRV
Trigger: CACCCTCACAGACACACCCCAAAATAATGCCTTACC...CAGACCGTGGATAATAGGATGTTCCCTGGTCTTGGCATAGAGGCCATAGGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp AGCACCAAGGGAGAGGTTGTGACACAGGCAAGTGGACGAAGCTCCCTGAGAGTACTTCAAAGACGAGATTaGCAGTATTTTAGCATACAC +
Preference number: 4 (lower is better)
Translates to: STKGEVVTQASGRSSLRVLQRRD*QYFSIH
Trigger: GTGTATGCTAAAATACTGTCAATCTCGTCTTTGAAG...TACTCTCAGGGAGCTTCGTCCACTTGCCTGTGTCACAACCTCTCCCTTGGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp CACGGTCTGACAAGATTAGAATGTTATGCTCTGCAGAGGCAGCAGGCTGGGGGTCAAGGGTATACAGAGTaGTATAATGGACTATGGAGA +
Preference number: 4 (lower is better)
Translates to: HGLTRLECYALQRQQAGGQGYTE*YNGLWR
Trigger: TCTCCATAGTCCATTATATCACTCTGTATACCCTTG...ACCCCCAGCCTGCTGCCTCTGCAGAGCATAACATTCTAATCTTGTCAGACCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTACCCGGCAGGAAGGGTaGCAAGTGTGGCCGATCTCA +
Preference number: 4 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPTRQEG*QVWPIS
Trigger: TGAGATCGGCCACACTTGGCACCCTTCCTGCCGGGT...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTGCCAGCACTCGGAGGTaGGGAATGGAGGGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPASTRR*GMEGKG
Trigger: ACCTTTCCCCTCCATTCCGCACCTCCGAGTGCTGGC...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340353.11
CDS-3UTR CCA 90 bp ACTTCTCCAATTAAATTGCTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACATTCGGAGGCAGCACTaGATCAAGTACCCCACGCTA +
Preference number: 4 (lower is better)
Translates to: TSPIKLLYTKAALSVESYIRRQH*IKYPTL
Trigger: TAGCGTGGGGTACTTGATCCAGTGCTGCCTCCGAAT...GTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CCA 90 bp CACGGTCTGACAAGATTAGAATGTTATGCTCTGCAGAGGCAGCAGGCTGGGGGTGAACTTCCAGTAAGATaGTCTCAAAGTCTGAACTTC +
Preference number: 4 (lower is better)
Translates to: HGLTRLECYALQRQQAGGELPVR*SQSLNF
Trigger: GAAGTTCAGACTTTGAGACCATCTTACTGGAAGTTC...ACCCCCAGCCTGCTGCCTCTGCAGAGCATAACATTCTAATCTTGTCAGACCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp CACGGTCTGACAAGATTAGAATGTTATGCTCTGCAGAGGCAGCAGGCTGGGGGTGACCAAATGATAAAGTaGCTCTGTTACCATAGTACC +
Preference number: 4 (lower is better)
Translates to: HGLTRLECYALQRQQAGGDQMIK*LCYHST
Trigger: GGTACTATGGTAACAGAGCCACTTTATCATTTGGTC...ACCCCCAGCCTGCTGCCTCTGCAGAGCATAACATTCTAATCTTGTCAGACCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp CACGGTCTGACAAGATTAGAATGTTATGCTCTGCAGAGGCAGCAGGCTGGGGGTTACAGGTCTACTTTATaGAAGCCTGAATCTCTCAAG +
Preference number: 4 (lower is better)
Translates to: HGLTRLECYALQRQQAGGYRSTL*KPESLK
Trigger: CTTGAGAGATTCAGGCTTCCATAAAGTAGACCTGTA...ACCCCCAGCCTGCTGCCTCTGCAGAGCATAACATTCTAATCTTGTCAGACCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp TCTCCAGGTTATGAATGGCCTGTGGTGGGGTTTCTCAGCCTCCACAATCACATGCATTTCTTAATGTTGTaGTGGTTCCTCTTGCTACAC +
Preference number: 4 (lower is better)
Translates to: SPGYEWPVVGFLSLHNHMHFLML*WFLLLH
Trigger: GTGTAGCAAGAGGAACCATCACAACATTAAGAAATG...CATGTGATTGTGGAGGCTGAGAAACCCCACCACAGGCCATTCATAACCTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp ACTTCTCCAATTAAATTGCTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACGATGGTCTCAAAGTCTaGACTTCCATGACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: TSPIKLLYTKAALSVESYDGLKV*TSMTAA
Trigger: GGCAGCTGTCATGGAAGTTCAGACTTTGAGACCATC...GTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp TCTCCAGGTTATGAATGGCCTGTGGTGGGGTTTCTCAGCCTCCACAATCACATGTATTACAAAGTCACCTaGGGCCACTACTTTAAACAG +
Preference number: 4 (lower is better)
Translates to: SPGYEWPVVGFLSLHNHMYYKVT*GHYFKQ
Trigger: CTGTTTAAAGTAGTGGCCTCAGGTGACTTTGTAATA...CATGTGATTGTGGAGGCTGAGAAACCCCACCACAGGCCATTCATAACCTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp TCTCCAGGTTATGAATGGCCTGTGGTGGGGTTTCTCAGCCTCCACAATCACATGCTTCTCCAATTAAATTaGTCTACACGAAAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SPGYEWPVVGFLSLHNHMLLQLN*STRKQH
Trigger: GTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAG...CATGTGATTGTGGAGGCTGAGAAACCCCACCACAGGCCATTCATAACCTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp AGCACCAAGGGAGAGGTTGTGACACAGGCAAGTGGACGAAGCTCCCTGAGAGTACTCCTTCCATATCTGTaGAATTATCTTCTACATCAT +
Preference number: 4 (lower is better)
Translates to: STKGEVVTQASGRSSLRVLLPYL*NYLLHH
Trigger: ATGATGTAGAAGATAATTGCACAGATATGGAAGGAG...TACTCTCAGGGAGCTTCGTCCACTTGCCTGTGTCACAACCTCTCCCTTGGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp CCTTGGACTGAGAATTACACCATCAGTTTCCCTGGTTCCAAGGCTTTTGGACTTTGTCTGCAAGATTGCTaGCACAGATTCAGACCCTAC +
Preference number: 4 (lower is better)
Translates to: PWTENYTISFPGSKAFGLCLQDC*HRFRPY
Trigger: GTAGGGTCTGAATCTGTGGCAGCAATCTTGCAGACA...AAGTCCAAAAGCCTTGGAACCAGGGAAACTGATGGTGTAATTCTCAGTCCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp TGCAACTACAGGGCTATTACAAAGTCACCTGAGGCCACTACTTTAAACAGAAACTGTGACACAGGCAAGTaGACGAAGCTCCCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: CNYRAITKSPEATTLNRNCDTGK*TKLPES
Trigger: ACTCTCAGGGAGCTTCGTCCACTTGCCTGTGTCACA...GTTTCTGTTTAAAGTAGTGGCCTCAGGTGACTTTGTAATAGCCCTGTAGTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp CACGGTCTGACAAGATTAGAATGTTATGCTCTGCAGAGGCAGCAGGCTGGGGGTTTGAAAATTCAGCCTTaGACTGAGAATTACACCATC +
Preference number: 4 (lower is better)
Translates to: HGLTRLECYALQRQQAGGLKIQP*TENYTI
Trigger: GATGGTGTAATTCTCAGTCCAAGGCTGAATTTTCAA...ACCCCCAGCCTGCTGCCTCTGCAGAGCATAACATTCTAATCTTGTCAGACCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp ACTTCTCCAATTAAATTGCTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACGGACTTTTCGGTTCATaGCAGCAAATTTGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: TSPIKLLYTKAALSVESYGLFGS*QQICPW
Trigger: CCAAGGGCAAATTTGCTGTCATGAACCGAAAAGTCC...GTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp TATCCCTCTCATATCTCTCTCTATGTATCTCTCTATCCCTATTGTTCTGCCTCTCCCAAGAGGATCACTTaGGGCCAGGAGTTTAAGACC +
Preference number: 4 (lower is better)
Translates to: YPSHISLYVSLYPYCSASPKRIT*GQEFKT
Trigger: GGTCTTAAACTCCTGGCCTCAAGTGATCCTCTTGGG...AGAGGCAGAACAATAGGGATAGAGAGATACATAGAGAGAGATATGAGAGGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp TATGCCTATGGCCTCTATGCCAAGACCAGGGAACATCCTATTATCCACGGTCTGAATTCAGCCTTGGACTaGGAATTACACCATCAGTTT +
Preference number: 4 (lower is better)
Translates to: YAYGLYAKTREHPIIHGLNSALD*ELHHQF
Trigger: AAACTGATGGTGTAATTCTCAGTCCAAGGCTGAATT...CAGACCGTGGATAATAGGATGTTCCCTGGTCTTGGCATAGAGGCCATAGGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp TATCCCTCTCATATCTCTCTCTATGTATCTCTCTATCCCTATTGTTCTGCCTCTTTTGGGGTGTGTCTGTaGGGGTGTTTCCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: YPSHISLYVSLYPYCSASFGVCL*GCFQRR
Trigger: TCTCCTCTGGAAACACCCTCACAGACACACCCCAAA...AGAGGCAGAACAATAGGGATAGAGAGATACATAGAGAGAGATATGAGAGGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGAAAGTCCTCGGATGTTaGGCGCTCGGCGTATCGCAG +
Preference number: 4 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWKVLGC*ALGVSQ
Trigger: CTGCGATACGCCGAGCGCTCAACATCCGAGGACTTT...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340353.11
CDS-3UTR GCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCAATGGCCACATAAGATaGTGGCAGAGCGGCACCAAA +
Preference number: 4 (lower is better)
Translates to: LYTKAALSVESYFKSITFNGHIR*WQSGTK
Trigger: TTTGGTGCCGCTCTGCCAGCATCTTATGTGGCCATT...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp TCTCCAGGTTATGAATGGCCTGTGGTGGGGTTTCTCAGCCTCCACAATCACATGTATTCTGGTGACAGGTaGACTAAAATTTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: SPGYEWPVVGFLSLHNHMYSGDR*TKISDF
Trigger: GAAGTCTGAAATTTTAGTGCACCTGTCACCAGAATA...CATGTGATTGTGGAGGCTGAGAAACCCCACCACAGGCCATTCATAACCTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp TCTCCAGGTTATGAATGGCCTGTGGTGGGGTTTCTCAGCCTCCACAATCACATGTCCATTACATTTTATTaGCCAAAACAGGGTCACATG +
Preference number: 4 (lower is better)
Translates to: SPGYEWPVVGFLSLHNHMSITFY*PKQGHM
Trigger: CATGTGACCCTGTTTTGGCCAATAAAATGTAATGGA...CATGTGATTGTGGAGGCTGAGAAACCCCACCACAGGCCATTCATAACCTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp GCTAGGCATGTAACTGTCTTAAACAACATCAGTGTTCCCTCAGCAAGGAAAAACTCTCCAGGTTATGAATaGCCTGTGGTGGGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: ARHVTVLNNISVPSARKNSPGYE*PVVGFL
Trigger: GAGAAACCCCACCACAGGCCATTCATAACCTGGAGA...GTTTTTCCTTGCTGAGGGAACACTGATGTTGTTTAAGACAGTTACATGCCTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp AGGAGACGAACACTCGAGCACAACAAGAAAATACTGTGTGACATTTGCTCAGTTTTCTCCAACTGCCCATaGACATTAGGACCCCAGATC +
Preference number: 4 (lower is better)
Translates to: RRRTLEHNKKILCDICSVFSNCP*TLGPQI
Trigger: GATCTGGGGTCCTAATGTCCATGGGCAGTTGGAGAA...AACTGAGCAAATGTCACACAGTATTTTCTTGTTGTGCTCGAGTGTTCGTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR CAA 72 bp ATCCCTGAAGTAAGAATGGCCACTTCTCCAATTAAATaGCTCTACACGAAAGCAGCACTGTCCGTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: IPEVRMATSPIK*LYTKAALSVES
Trigger: ACTCTCCACGGACAGTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGTGGCCATTCTTACTTCAGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
3UTR CAA 72 bp TCTGGGCTAATAATTTCTCTGCTCCAAAAACAACATTaGGGCCATTGCTCCAGTGGTCAGTTCCCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: SGLIISLLQKQH*GHCSSGQFPSV
Trigger: GACTGAAGGGAACTGACCACTGGAGCAATGGCCCAAATGTTGTTTTTGGAGCAGAGAAATTATTAGCCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp GCTAGGCATGTAACTGTCTTAAACAACATCAGTGTTCCCTCAGCAAGGAAAAACCATCATCTAAGTTTCTaGTCCAGCGCAGGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: ARHVTVLNNISVPSARKNHHLSF*SSAGSN
Trigger: GTTGCTTCCTGCGCTGGATCAGAAACTTAGATGATG...GTTTTTCCTTGCTGAGGGAACACTGATGTTGTTTAAGACAGTTACATGCCTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCCATCATCTAAGTTTCTaGTCCAGCGCAGGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: LYTKAALSVESYFKSITFHHLSF*SSAGSN
Trigger: GTTGCTTCCTGCGCTGGATCAGAAACTTAGATGATG...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCGGACTTTTCGGTTCATaGCAGCAAATTTGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LYTKAALSVESYFKSITFGLFGS*QQICPW
Trigger: CCAAGGGCAAATTTGCTGTCATGAACCGAAAAGTCC...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp TGCAACTACAGGGCTATTACAAAGTCACCTGAGGCCACTACTTTAAACAGAAACCCAGGTTCTCAGACTTaGAAATTCAGCCTTGGACTG +
Preference number: 4 (lower is better)
Translates to: CNYRAITKSPEATTLNRNPGSQT*KFSLGL
Trigger: CAGTCCAAGGCTGAATTTTCAAGTCTGAGAACCTGG...GTTTCTGTTTAAAGTAGTGGCCTCAGGTGACTTTGTAATAGCCCTGTAGTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp TATCCCTCTCATATCTCTCTCTATGTATCTCTCTATCCCTATTGTTCTGCCTCTCAACATTTGGGCCATTaGTCCAGTGGTCAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: YPSHISLYVSLYPYCSASQHLGH*SSGQFP
Trigger: AGGGAACTGACCACTGGAGCAATGGCCCAAATGTTG...AGAGGCAGAACAATAGGGATAGAGAGATACATAGAGAGAGATATGAGAGGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp AGGAGACGAACACTCGAGCACAACAAGAAAATACTGTGTGACATTTGCTCAGTTTCCATGACAGCTGCCTaGAAGCAAATTGCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: RRRTLEHNKKILCDICSVSMTAA*KQIAVE
Trigger: CTCTACAGCAATTTGCTTCCAGGCAGCTGTCATGGA...AACTGAGCAAATGTCACACAGTATTTTCTTGTTGTGCTCGAGTGTTCGTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp ACTTCTCCAATTAAATTGCTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAGGAAAACTCTGTaGGCAACTCTGGTGTTACAG +
Preference number: 4 (lower is better)
Translates to: TSPIKLLYTKAALSVESYFRKTL*ATLVLQ
Trigger: CTGTAACACCAGAGTTGCCCACAGAGTTTTCCTGAA...GTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CCA 90 bp TATGCCTATGGCCTCTATGCCAAGACCAGGGAACATCCTATTATCCACGGTCTGATCAGCAGGACTTTATaGTGTCACCTCTTTATTCTA +
Preference number: 4 (lower is better)
Translates to: YAYGLYAKTREHPIIHGLISRTL*CHLFIL
Trigger: TAGAATAAAGAGGTGACACCATAAAGTCCTGCTGAT...CAGACCGTGGATAATAGGATGTTCCCTGGTCTTGGCATAGAGGCCATAGGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp GCTAGGCATGTAACTGTCTTAAACAACATCAGTGTTCCCTCAGCAAGGAAAAACCACCATCAGTTTCCCTaGTTCCAAGGCTTTTGGACT +
Preference number: 4 (lower is better)
Translates to: ARHVTVLNNISVPSARKNHHQFP*FQGFWT
Trigger: AGTCCAAAAGCCTTGGAACCAGGGAAACTGATGGTG...GTTTTTCCTTGCTGAGGGAACACTGATGTTGTTTAAGACAGTTACATGCCTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGAGAGCGGGGTTACTCTaGGCCAAAGTCCTCGGATGT +
Preference number: 4 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWRAGLL*AKVLGC
Trigger: ACATCCGAGGACTTTGGCCCAGAGTAACCCCGCTCT...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340353.11
CDS-3UTR CCA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGCTCGGAGGTGCGGAATaGAGGGGAAAGGTCACGAGA +
Preference number: 4 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLLGGAE*RGKVTR
Trigger: TCTCGTGACCTTTCCCCTCCATTCCGCACCTCCGAG...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340353.11
3UTR CAA 72 bp CTTTATCGGATGTGTCCATTTCCATTTGCCCCTAACTaGCCATTAGTACATAGGTTCACTGGGCTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: LYRMCPFPFAPN*PLVHRFTGLPN
Trigger: ATTTGGCAGCCCAGTGAACCTATGTACTAATGGCAAGTTAGGGGCAAATGGAAATGGACACATCCGATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCAGCCATCCTTGCACCTaGAAAAGAACATGTACATGG +
Preference number: 4 (lower is better)
Translates to: LYTKAALSVESYFKSITFSHPCT*KRTCTW
Trigger: CCATGTACATGTTCTTTTTCAGGTGCAAGGATGGCT...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp GCTAGGCATGTAACTGTCTTAAACAACATCAGTGTTCCCTCAGCAAGGAAAAACCTGGGGATGAAATCCTaGAAGTGTTTAGATGCACCA +
Preference number: 4 (lower is better)
Translates to: ARHVTVLNNISVPSARKNLGMKS*KCLDAP
Trigger: TGGTGCATCTAAACACTTTCAGGATTTCATCCCCAG...GTTTTTCCTTGCTGAGGGAACACTGATGTTGTTTAAGACAGTTACATGCCTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp ACTTCTCCAATTAAATTGCTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTTATCCAAATGGTATaGGACCCATCTTTGCATCCC +
Preference number: 4 (lower is better)
Translates to: TSPIKLLYTKAALSVESYFIQMV*DPSLHP
Trigger: GGGATGCAAAGATGGGTCTCATACCATTTGGATAAA...GTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCTGCAGTCTGTCCCAATaGAATCAAACTGGACTTCTC +
Preference number: 4 (lower is better)
Translates to: LYTKAALSVESYFKSITFCSLSQ*NQTGLL
Trigger: GAGAAGTCCAGTTTGATTTCATTGGGACAGACTGCA...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCAGAGCCTCTCACTTaGACGGCTGGCTTAAAAGGT +
Preference number: 4 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWPEPLT*TAGLKG
Trigger: ACCTTTTAAGCCAGCCGTTCAAGTGAGAGGCTCTGG...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCTTGTTATCACCGTTATaGTCACTCCAGAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: LYTKAALSVESYFKSITFLLSPL*SLQSLS
Trigger: TGAGAGGCTCTGGAGTGATCATAACGGTGATAACAA...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp TATCCCTCTCATATCTCTCTCTATGTATCTCTCTATCCCTATTGTTCTGCCTCTCCGTTTCCGGAGAATTaGTGCAATCAAGTACAGAGG +
Preference number: 4 (lower is better)
Translates to: YPSHISLYVSLYPYCSASPFPEN*CNQVQR
Trigger: CCTCTGTACTTGATTGCAGCAATTCTCCGGAAACGG...AGAGGCAGAACAATAGGGATAGAGAGATACATAGAGAGAGATATGAGAGGGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp CCTTGGACTGAGAATTACACCATCAGTTTCCCTGGTTCCAAGGCTTTTGGACTTATAGGGAACCTTCCCTaGTTCAATGCCTTTGAAATA +
Preference number: 4 (lower is better)
Translates to: PWTENYTISFPGSKAFGLIGNLP*FNAFEI
Trigger: TATTTCAAAGGCATTGAAGCAGGGAAGGTTCCCTAT...AAGTCCAAAAGCCTTGGAACCAGGGAAACTGATGGTGTAATTCTCAGTCCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp AGGAGACGAACACTCGAGCACAACAAGAAAATACTGTGTGACATTTGCTCAGTTAACTTCCATGACAGCTaGCTGGAAGCAAATTGCTGT +
Preference number: 4 (lower is better)
Translates to: RRRTLEHNKKILCDICSVNFHDS*LEANCC
Trigger: ACAGCAATTTGCTTCCAGGCAGCTGTCATGGAAGTT...AACTGAGCAAATGTCACACAGTATTTTCTTGTTGTGCTCGAGTGTTCGTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp ACTTCTCCAATTAAATTGCTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTACAGTTGTGTATCTTaGATCCAACCTGGGGATGAA +
Preference number: 4 (lower is better)
Translates to: TSPIKLLYTKAALSVESYYSCVS*IQPGDE
Trigger: TTCATCCCCAGGTTGGATCCAAGATACACAACTGTA...GTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CCA 90 bp GCTAGGCATGTAACTGTCTTAAACAACATCAGTGTTCCCTCAGCAAGGAAAAACCTCTGTGGGCAACTCTaGTGTTACAGTTGTGTATCT +
Preference number: 4 (lower is better)
Translates to: ARHVTVLNNISVPSARKNLCGQL*CYSCVS
Trigger: AGATACACAACTGTAACACCAGAGTTGCCCACAGAG...GTTTTTCCTTGCTGAGGGAACACTGATGTTGTTTAAGACAGTTACATGCCTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCACACTAGCTATATCATaGCCAACTTACTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: LYTKAALSVESYFKSITFTLAIS*PTYCPT
Trigger: AGTGGGGCAGTAAGTTGGCCATGATATAGCTAGTGT...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp GCTAGGCATGTAACTGTCTTAAACAACATCAGTGTTCCCTCAGCAAGGAAAAACTATGGCAGGAAAGCATaGGCCAGGAAAGGTAAAGAA +
Preference number: 4 (lower is better)
Translates to: ARHVTVLNNISVPSARKNYGRKA*ARKGKE
Trigger: TTCTTTACCTTTCCTGGCCCATGCTTTCCTGCCATA...GTTTTTCCTTGCTGAGGGAACACTGATGTTGTTTAAGACAGTTACATGCCTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp TATCCCTCTCATATCTCTCTCTATGTATCTCTCTATCCCTATTGTTCTGCCTCTCCTCCGAGTAAAGGCTaGTTGGAAAAGTATCTGGAC +
Preference number: 4 (lower is better)
Translates to: YPSHISLYVSLYPYCSASPPSKG*LEKYLD
Trigger: GTCCAGATACTTTTCCAACCAGCCTTTACTCGGAGG...AGAGGCAGAACAATAGGGATAGAGAGATACATAGAGAGAGATATGAGAGGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp TATCCCTCTCATATCTCTCTCTATGTATCTCTCTATCCCTATTGTTCTGCCTCTTTGCAGCATCTTGGATaGAGCTGGAGGCCATTATTC +
Preference number: 4 (lower is better)
Translates to: YPSHISLYVSLYPYCSASLQHLG*SWRPLF
Trigger: GAATAATGGCCTCCAGCTCCATCCAAGATGCTGCAA...AGAGGCAGAACAATAGGGATAGAGAGATACATAGAGAGAGATATGAGAGGGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp TGCAACTACAGGGCTATTACAAAGTCACCTGAGGCCACTACTTTAAACAGAAACTGTACATGGCAGCTGTaGTGCAAAACAAAAGGACTT +
Preference number: 4 (lower is better)
Translates to: CNYRAITKSPEATTLNRNCTWQL*CKTKGL
Trigger: AAGTCCTTTTGTTTTGCATCACAGCTGCCATGTACA...GTTTCTGTTTAAAGTAGTGGCCTCAGGTGACTTTGTAATAGCCCTGTAGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp TGCAACTACAGGGCTATTACAAAGTCACCTGAGGCCACTACTTTAAACAGAAACATATGCTGCCTCTGGTaGAAAAGAATGTGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: CNYRAITKSPEATTLNRNICCLW*KRMCGN
Trigger: ATTCCCACACATTCTTTTTCACCAGAGGCAGCATAT...GTTTCTGTTTAAAGTAGTGGCCTCAGGTGACTTTGTAATAGCCCTGTAGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp ACTTCTCCAATTAAATTGCTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACCTGCTTCAATGCCTTTaGAATACATTGTCTCTACCA +
Preference number: 4 (lower is better)
Translates to: TSPIKLLYTKAALSVESYLLQCL*NTLSLP
Trigger: TGGTAGAGACAATGTATTTCAAAGGCATTGAAGCAG...GTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCAGTCTGAAACCGAAATaGTCCTTTAACAGCATTGCC +
Preference number: 4 (lower is better)
Translates to: LYTKAALSVESYFKSITFSLKPK*SFNSIA
Trigger: GGCAATGCTGTTAAAGGATCATTTCGGTTTCAGACT...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp ACTTCTCCAATTAAATTGCTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACCTGGGAAACCCTGACTaGTACAGAACTTTAAGAAAT +
Preference number: 4 (lower is better)
Translates to: TSPIKLLYTKAALSVESYLGNPD*YRTLRN
Trigger: ATTTCTTAAAGTTCTGTATCAGTCAGGGTTTCCCAG...GTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp ACTTCTCCAATTAAATTGCTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTATGAGACCCATCTTTaGATCCCTGAAGTAAGAATG +
Preference number: 4 (lower is better)
Translates to: TSPIKLLYTKAALSVESYYETHL*IPEVRM
Trigger: CATTCTTACTTCAGGGATGCAAAGATGGGTCTCATA...GTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp TGCAACTACAGGGCTATTACAAAGTCACCTGAGGCCACTACTTTAAACAGAAACATAGGTTCACTGGGCTaGCAAATAGCCCAATTAACT +
Preference number: 4 (lower is better)
Translates to: CNYRAITKSPEATTLNRNIGSLG*QIAQLT
Trigger: AGTTAATTGGGCTATTTGGCAGCCCAGTGAACCTAT...GTTTCTGTTTAAAGTAGTGGCCTCAGGTGACTTTGTAATAGCCCTGTAGTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCCACAAACTGCCAACTTaGCAAGACTACTTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: LYTKAALSVESYFKSITFHKLPT*QDYFVP
Trigger: TGGAACAAAGTAGTCTTGGCAAGTTGGCAGTTTGTG...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp ACTTCTCCAATTAAATTGCTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACATTCACTCACTACTCTaGTGTAGTCCTATGACACTA +
Preference number: 4 (lower is better)
Translates to: TSPIKLLYTKAALSVESYIHSLL*CSPMTL
Trigger: TAGTGTCATAGGACTACAGCAGAGTAGTGAGTGAAT...GTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp ACTTCTCCAATTAAATTGCTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACGAACTTCCAGTAAGATaGTCTCAAAGTCTGAACTTC +
Preference number: 4 (lower is better)
Translates to: TSPIKLLYTKAALSVESYELPVR*SQSLNF
Trigger: GAAGTTCAGACTTTGAGACCATCTTACTGGAAGTTC...GTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CCA 90 bp TGCAACTACAGGGCTATTACAAAGTCACCTGAGGCCACTACTTTAAACAGAAACTACAGTTGTGTATCTTaGATCCAACCTGGGGATGAA +
Preference number: 4 (lower is better)
Translates to: CNYRAITKSPEATTLNRNYSCVS*IQPGDE
Trigger: TTCATCCCCAGGTTGGATCCAAGATACACAACTGTA...GTTTCTGTTTAAAGTAGTGGCCTCAGGTGACTTTGTAATAGCCCTGTAGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCAAGCAGCACTGTCCGTaGAGAGTTACTTCAAATCTA +
Preference number: 4 (lower is better)
Translates to: LYTKAALSVESYFKSITFKQHCP*RVTSNL
Trigger: TAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTT...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CCA 90 bp ACTTCTCCAATTAAATTGCTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACGACCAAATGATAAAGTaGCTCTGTTACCATAGTACC +
Preference number: 4 (lower is better)
Translates to: TSPIKLLYTKAALSVESYDQMIK*LCYHST
Trigger: GGTACTATGGTAACAGAGCCACTTTATCATTTGGTC...GTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CCA 90 bp TGCAACTACAGGGCTATTACAAAGTCACCTGAGGCCACTACTTTAAACAGAAACTCTGTGGTAATATACTaGGATTTTCAGGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CNYRAITKSPEATTLNRNSVVIY*DFQVCW
Trigger: CCAGCAGACCTGAAAATCCCAGTATATTACCACAGA...GTTTCTGTTTAAAGTAGTGGCCTCAGGTGACTTTGTAATAGCCCTGTAGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp TATCCCTCTCATATCTCTCTCTATGTATCTCTCTATCCCTATTGTTCTGCCTCTTACATAGCAAAGATATaGCAGGAAAGCATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: YPSHISLYVSLYPYCSASYIAKI*QESMGQ
Trigger: CTGGCCCATGCTTTCCTGCCATATCTTTGCTATGTA...AGAGGCAGAACAATAGGGATAGAGAGATACATAGAGAGAGATATGAGAGGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCAAAGCCAGGAGTCCATaGGTAGAATTTTCCAAGTAT +
Preference number: 4 (lower is better)
Translates to: LYTKAALSVESYFKSITFKARSP*VEFSKY
Trigger: ATACTTGGAAAATTCTACTCATGGACTCCTGGCTTT...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGAAGTCTGAACTTCCATaGCAGCTGCCTGGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWKSELP*QLPGSK
Trigger: TTTGCTTCCAGGCAGCTGTCATGGAAGTTCAGACTT...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCATCTTTGCATCCCTaGAGTAAGAATGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWPSLHP*SKNGHF
Trigger: GAAGTGGCCATTCTTACTTCAGGGATGCAAAGATGG...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp GCTAGGCATGTAACTGTCTTAAACAACATCAGTGTTCCCTCAGCAAGGAAAAACGAAGGTTGGAGAACCTaGATGGAATTAGTGACAAAT +
Preference number: 4 (lower is better)
Translates to: ARHVTVLNNISVPSARKNEGWRT*MELVTN
Trigger: ATTTGTCACTAATTCCATTCAGGTTCTCCAACCTTC...GTTTTTCCTTGCTGAGGGAACACTGATGTTGTTTAAGACAGTTACATGCCTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTTGCAGTCTGTCCCAATaGAATCAAACTGGACTTCTC +
Preference number: 4 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPCSLSQ*NQTGLL
Trigger: GAGAAGTCCAGTTTGATTTCATTGGGACAGACTGCA...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp AGGAGACGAACACTCGAGCACAACAAGAAAATACTGTGTGACATTTGCTCAGTTCCACTCATTTTCAGCTaGGTGAAGTATTCTACTATG +
Preference number: 4 (lower is better)
Translates to: RRRTLEHNKKILCDICSVPLIFS*VKYSTM
Trigger: CATAGTAGAATACTTCACTCAGCTGAAAATGAGTGG...AACTGAGCAAATGTCACACAGTATTTTCTTGTTGTGCTCGAGTGTTCGTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCCTTAAAAGGTTGCAATaGAGTCCAAGGAGACTAGTT +
Preference number: 4 (lower is better)
Translates to: LYTKAALSVESYFKSITFLKRLQ*SPRRLV
Trigger: AACTAGTCTCCTTGGACTTCATTGCAACCTTTTAAG...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGGCTATCCCTGAGCAGTaGCAGGCTATCAAAAACTGC +
Preference number: 4 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLAIPEQ*QAIKNC
Trigger: GCAGTTTTTGATAGCCTGTCACTGCTCAGGGATAGC...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGGGCCTAGAACAATTATaGTTCATCCCTGGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLGLEQL*FIPGAR
Trigger: CCTAGCCCCAGGGATGAATCATAATTGTTCTAGGCC...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCGTTTCCGGAGAATTaGTGCAATCAAGTACAGAGG +
Preference number: 4 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWPFPEN*CNQVQR
Trigger: CCTCTGTACTTGATTGCAGCAATTCTCCGGAAACGG...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCTGTTTGCAACATCTATaGCTTGGTCCATGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: LYTKAALSVESYFKSITFCLQHL*LGPCLH
Trigger: ATGCAAACATGGACCAAGGCATAGATGTTGCAAACA...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCCAACACAAGTTCTACTaGATAATTTGCACTGGCCTA +
Preference number: 4 (lower is better)
Translates to: LYTKAALSVESYFKSITFQHKFY*IICTGL
Trigger: TAGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTG...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp CCTTGGACTGAGAATTACACCATCAGTTTCCCTGGTTCCAAGGCTTTTGGACTTGGTTATAATTCCTTTTaGAACACAAGTTCTACTGCA +
Preference number: 4 (lower is better)
Translates to: PWTENYTISFPGSKAFGLGYNSF*NTSSTA
Trigger: TGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACC...AAGTCCAAAAGCCTTGGAACCAGGGAAACTGATGGTGTAATTCTCAGTCCAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp ACTTCTCCAATTAAATTGCTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCTCAATCCACCACTaGAAATTGGTTATTCACTCA +
Preference number: 4 (lower is better)
Translates to: TSPIKLLYTKAALSVESYFSIHH*KLVIHS
Trigger: TGAGTGAATAACCAATTTGCAGTGGTGGATTGAGAA...GTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp TGCAACTACAGGGCTATTACAAAGTCACCTGAGGCCACTACTTTAAACAGAAACATAAAGCATGTTGTATaGCTATGGCCTCTATGCCAA +
Preference number: 4 (lower is better)
Translates to: CNYRAITKSPEATTLNRNIKHVV*LWPLCQ
Trigger: TTGGCATAGAGGCCATAGGCATACAACATGCTTTAT...GTTTCTGTTTAAAGTAGTGGCCTCAGGTGACTTTGTAATAGCCCTGTAGTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTCAGGCTATCAAAAACTaGCGACTCAGATTCAGATGC +
Preference number: 4 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPQAIKN*RLRFRC
Trigger: GCATCTGAATCTGAGTCGGCAGTTTTTGATAGCCTG...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp CCTTGGACTGAGAATTACACCATCAGTTTCCCTGGTTCCAAGGCTTTTGGACTTTTGTCTCTACCAATTTaGACGCTAAATACATGGAAA +
Preference number: 4 (lower is better)
Translates to: PWTENYTISFPGSKAFGLLSLPI*TLNTWK
Trigger: TTTCCATGTATTTAGCGTCCAAATTGGTAGAGACAA...AAGTCCAAAAGCCTTGGAACCAGGGAAACTGATGGTGTAATTCTCAGTCCAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp TGCAACTACAGGGCTATTACAAAGTCACCTGAGGCCACTACTTTAAACAGAAACATGCTCAAATGCAGATaGTTAATGGCACCATTCAGT +
Preference number: 4 (lower is better)
Translates to: CNYRAITKSPEATTLNRNMLKCR*LMAPFS
Trigger: ACTGAATGGTGCCATTAACCATCTGCATTTGAGCAT...GTTTCTGTTTAAAGTAGTGGCCTCAGGTGACTTTGTAATAGCCCTGTAGTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp TGCAACTACAGGGCTATTACAAAGTCACCTGAGGCCACTACTTTAAACAGAAACTCCATGTTTGCATATTaGATCCACAAATTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: CNYRAITKSPEATTLNRNSMFAY*IHKFPD
Trigger: GTCAGGAAATTTGTGGATTCAATATGCAAACATGGA...GTTTCTGTTTAAAGTAGTGGCCTCAGGTGACTTTGTAATAGCCCTGTAGTTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCTCCATGTTTGCATATTaGATCCACAAATTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: LYTKAALSVESYFKSITFSMFAY*IHKFPD
Trigger: GTCAGGAAATTTGTGGATTCAATATGCAAACATGGA...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTCAAATTTGCCCTTGGTaGGTCTTAAAAGGAACTTCC +
Preference number: 4 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPQICPW*VLKGTS
Trigger: GGAAGTTCCTTTTAAGACTCACCAAGGGCAAATTTG...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTTGTCAGTCACTACAGTaGTCCAGAATCTTATTCTGG +
Preference number: 4 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPCQSLQ*SRILFW
Trigger: CCAGAATAAGATTCTGGATCACTGTAGTGACTGACA...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCAAATCCATGTACCCGTaGTCCTTTGTAAATCCTAAA +
Preference number: 4 (lower is better)
Translates to: LYTKAALSVESYFKSITFKSMYP*SFVNPK
Trigger: TTTAGGATTTACAAAGGATCACGGGTACATGGATTT...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTCATAAGTTAAACAGCTaGGAGGACACAAACTGCCAA +
Preference number: 4 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPHKLNS*EDTNCQ
Trigger: TTGGCAGTTTGTGTCCTCTCAGCTGTTTAACTTATG...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCCAAGAAAATACTGTGTaGCATTTGCTCAGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: LYTKAALSVESYFKSITFQENTV*HLLSLD
Trigger: ATCCAAACTGAGCAAATGTCACACAGTATTTTCTTG...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp TATCCCTCTCATATCTCTCTCTATGTATCTCTCTATCCCTATTGTTCTGCCTCTGGGGAAATAATTGCTTaGACCAAGGAATTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: YPSHISLYVSLYPYCSASGEIIA*TKEFEV
Trigger: AACCTCAAATTCCTTGGTTCAAGCAATTATTTCCCC...AGAGGCAGAACAATAGGGATAGAGAGATACATAGAGAGAGATATGAGAGGGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGAAACAGATGCCTAAATaGAGAAGGGATTCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWKQMPK*RRDSEA
Trigger: TGCCTCCGAATCCCTTCTGCATTTAGGCATCTGTTT...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCTTCTCAATCCACCACTaGAAATTGGTTATTCACTCA +
Preference number: 4 (lower is better)
Translates to: LYTKAALSVESYFKSITFFSIHH*KLVIHS
Trigger: TGAGTGAATAACCAATTTGCAGTGGTGGATTGAGAA...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCTCTTCTACATCATCCTaGCTAAGAAAAACAGAGCAT +
Preference number: 4 (lower is better)
Translates to: LYTKAALSVESYFKSITFSSTSS*LRKTEH
Trigger: ATGCTCTGTTTTTCTTAGGCAGGATGATGTAGAAGA...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGTCCATGACAGCTGCCTaGAAGCAAATTGCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLSMTAA*KQIAVE
Trigger: CTCTACAGCAATTTGCTTCCAGGCAGCTGTCATGGA...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CCA 90 bp AGGAGACGAACACTCGAGCACAACAAGAAAATACTGTGTGACATTTGCTCAGTTTCCAGAATCTTATTCTaGCTATGGAGGAAGCTTAAT +
Preference number: 4 (lower is better)
Translates to: RRRTLEHNKKILCDICSVSRILF*LWRKLN
Trigger: ATTAAGCTTCCTCCATAGCCAGAATAAGATTCTGGA...AACTGAGCAAATGTCACACAGTATTTTCTTGTTGTGCTCGAGTGTTCGTCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTAAGCAGCACTGTCCGTaGAGAGTTACTTCAAATCTA +
Preference number: 4 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPKQHCP*RVTSNL
Trigger: TAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTT...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCTCCACCACTGCAAATTaGTTATTCACTCAACCTATA +
Preference number: 4 (lower is better)
Translates to: LYTKAALSVESYFKSITFSTTAN*LFTQPI
Trigger: TATAGGTTGAGTGAATAACCAATTTGCAGTGGTGGA...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCATACAAATAAAAATATaGCTAGGTACCGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LYTKAALSVESYFKSITFIQIKI*LGTVAH
Trigger: GTGAGCCACGGTACCTAGCCATATTTTTATTTGTAT...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGCATGTTGTATGCCTATaGCCTCTATGCCAAGACCAG +
Preference number: 4 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLHVVCL*PLCQDQ
Trigger: CTGGTCTTGGCATAGAGGCCATAGGCATACAACATG...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp AATTGTTCTGGATTTAAAGGCTTCACATACAGAGAAACATCTCCTTCCATATCTAGCCATCCTTGCACCTaGAAAAGAACATGTACATGG +
Preference number: 4 (lower is better)
Translates to: NCSGFKGFTYRETSPSISSHPCT*KRTCTW
Trigger: CCATGTACATGTTCTTTTTCAGGTGCAAGGATGGCT...AGATATGGAAGGAGATGTTTCTCTGTATGTGAAGCCTTTAAATCCAGAACAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGCTGGGGATGAAATCCTaGAAGTGTTTAGATGCACCA +
Preference number: 4 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLLGMKS*KCLDAP
Trigger: TGGTGCATCTAAACACTTTCAGGATTTCATCCCCAG...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCATAAGTTAAACAGCTaGGAGGACACAAACTGCCAA +
Preference number: 4 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWHKLNS*EDTNCQ
Trigger: TTGGCAGTTTGTGTCCTCTCAGCTGTTTAACTTATG...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTGAAGGTTGGAGAACCTaGATGGAATTAGTGACAAAT +
Preference number: 4 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPEGWRT*MELVTN
Trigger: ATTTGTCACTAATTCCATTCAGGTTCTCCAACCTTC...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGGGCTGTGTAAACAGATaGCTAAATGCAGAAGGGATT +
Preference number: 4 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWGCVNR*LNAEGI
Trigger: AATCCCTTCTGCATTTAGGCATCTGTTTACACAGCC...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGAACTTCCATGACAGCTaGCTGGAAGCAAATTGCTGT +
Preference number: 4 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLNFHDS*LEANCC
Trigger: ACAGCAATTTGCTTCCAGGCAGCTGTCATGGAAGTT...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTTATGAGACCCATCTTTaGATCCCTGAAGTAAGAATG +
Preference number: 4 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPYETHL*IPEVRM
Trigger: CATTCTTACTTCAGGGATGCAAAGATGGGTCTCATA...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTCAACACAAGTTCTACTaGATAATTTGCACTGGCCTA +
Preference number: 4 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPQHKFY*IICTGL
Trigger: TAGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTG...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCGGTTATAATTCCTTTTaGAACACAAGTTCTACTGCA +
Preference number: 4 (lower is better)
Translates to: LYTKAALSVESYFKSITFGYNSF*NTSSTA
Trigger: TGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACC...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTTGTTGGGTTTCTGTTTaGCATAACAACCAAGGATTG +
Preference number: 4 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPCWVSV*HNNQGL
Trigger: CAATCCTTGGTTGTTATGGCAAACAGAAACCCAACA...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp AATTGTTCTGGATTTAAAGGCTTCACATACAGAGAAACATCTCCTTCCATATCTTCAATGAGCTATGATTaGACCACTGTACTCCAACCC +
Preference number: 4 (lower is better)
Translates to: NCSGFKGFTYRETSPSISSMSYD*TTVLQP
Trigger: GGGTTGGAGTACAGTGGTGCAATCATAGCTCATTGA...AGATATGGAAGGAGATGTTTCTCTGTATGTGAAGCCTTTAAATCCAGAACAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGCTCTGTGGGCAACTCTaGTGTTACAGTTGTGTATCT +
Preference number: 4 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLLCGQL*CYSCVS
Trigger: AGATACACAACTGTAACACCAGAGTTGCCCACAGAG...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CCA 90 bp AATTGTTCTGGATTTAAAGGCTTCACATACAGAGAAACATCTCCTTCCATATCTTTCAGGAAAACTCTGTaGGCAACTCTGGTGTTACAG +
Preference number: 4 (lower is better)
Translates to: NCSGFKGFTYRETSPSISFRKTL*ATLVLQ
Trigger: CTGTAACACCAGAGTTGCCCACAGAGTTTTCCTGAA...AGATATGGAAGGAGATGTTTCTCTGTATGTGAAGCCTTTAAATCCAGAACAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCGAGTAAAGGCTGGTTaGAAAAGTATCTGGACAAGA +
Preference number: 4 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWRVKAG*KSIWTR
Trigger: TCTTGTCCAGATACTTTTCCAACCAGCCTTTACTCG...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGATATGCTGCCTCTGGTaGAAAAGAATGTGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLICCLW*KRMCGN
Trigger: ATTCCCACACATTCTTTTTCACCAGAGGCAGCATAT...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGCAAATTTGCCCTTGGTaGGTCTTAAAAGGAACTTCC +
Preference number: 4 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLQICPW*VLKGTS
Trigger: GGAAGTTCCTTTTAAGACTCACCAAGGGCAAATTTG...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGAGTCTGAAACCGAAATaGTCCTTTAACAGCATTGCC +
Preference number: 4 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLSLKPK*SFNSIA
Trigger: GGCAATGCTGTTAAAGGATCATTTCGGTTTCAGACT...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTGCTTTTCATTACCTATaGAATGTAGAGCACACAGAA +
Preference number: 4 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPAFHYL*NVEHTE
Trigger: TTCTGTGTGCTCTACATTTCATAGGTAATGAAAAGC...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGTGTTTGCAACATCTATaGCTTGGTCCATGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWCLQHL*LGPCLH
Trigger: ATGCAAACATGGACCAAGGCATAGATGTTGCAAACA...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp AATTGTTCTGGATTTAAAGGCTTCACATACAGAGAAACATCTCCTTCCATATCTGGCTGTGTAAACAGATaGCTAAATGCAGAAGGGATT +
Preference number: 4 (lower is better)
Translates to: NCSGFKGFTYRETSPSISGCVNR*LNAEGI
Trigger: AATCCCTTCTGCATTTAGGCATCTGTTTACACAGCC...AGATATGGAAGGAGATGTTTCTCTGTATGTGAAGCCTTTAAATCCAGAACAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGATAGGTTCACTGGGCTaGCAAATAGCCCAATTAACT +
Preference number: 4 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLIGSLG*QIAQLT
Trigger: AGTTAATTGGGCTATTTGGCAGCCCAGTGAACCTAT...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGTACCACTGCCCCAAATaGACGGTTTTTCAATCTCAA +
Preference number: 4 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLYHCPK*TVFQSQ
Trigger: TTGAGATTGAAAAACCGTGCATTTGGGGCAGTGGTA...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTTGTAGTTACCCTTTTTaGAACTACAGGGCTATTACA +
Preference number: 4 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPCSYPF*NYRAIT
Trigger: TGTAATAGCCCTGTAGTTGCAAAAAGGGTAACTACA...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCTCAAAATGCTCAAATaGAGATGGTTAATGGCACCA +
Preference number: 4 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWLKMLK*RWLMAP
Trigger: TGGTGCCATTAACCATCTGCATTTGAGCATTTTGAG...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGCATGCTTTAAACCTTTaGCACTATAGCTTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLHALNL*HYSFRV
Trigger: GACCCTGAAGCTATAGTGCCAAAGGTTTAAAGCATG...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTAGGCATCAACTTGACTaGATTAAGGAATATCTAGAG +
Preference number: 4 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPRHQLD*IKEYLE
Trigger: CTCTAGATATTCCTTAATCCAGTCAAGTTGATGCCT...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
3UTR CAA 72 bp ACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTaGCAGTCTGTCCCAATGAAATCAAACTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: TKFLCVCSNNYT*QSVPMKSNWTS
Trigger: AGAAGTCCAGTTTGATTTCATTGGGACAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGAAAGCCAGGAGTCCATaGGTAGAATTTTCCAAGTAT +
Preference number: 4 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLKARSP*VEFSKY
Trigger: ATACTTGGAAAATTCTACTCATGGACTCCTGGCTTT...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR TCA 90 bp AATTGTTCTGGATTTAAAGGCTTCACATACAGAGAAACATCTCCTTCCATATCTCTGCTTCAATGCCTTTaGAATACATTGTCTCTACCA +
Preference number: 4 (lower is better)
Translates to: NCSGFKGFTYRETSPSISLLQCL*NTLSLP
Trigger: TGGTAGAGACAATGTATTTCAAAGGCATTGAAGCAG...AGATATGGAAGGAGATGTTTCTCTGTATGTGAAGCCTTTAAATCCAGAACAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR TCA 90 bp AATTGTTCTGGATTTAAAGGCTTCACATACAGAGAAACATCTCCTTCCATATCTAAAAAGGTCCTCAGATaGTTCAATGATGCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: NCSGFKGFTYRETSPSISKKVLR*FNDASS
Trigger: ACTAGAGGCATCATTGAATCATCTGAGGACCTTTTT...AGATATGGAAGGAGATGTTTCTCTGTATGTGAAGCCTTTAAATCCAGAACAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGATAGGGAACCTTCCCTaGTTCAATGCCTTTGAAATA +
Preference number: 4 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLIGNLP*FNAFEI
Trigger: TATTTCAAAGGCATTGAAGCAGGGAAGGTTCCCTAT...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGCTTCTCCAATTAAATTaGTCTACACGAAAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLLLQLN*STRKQH
Trigger: GTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAG...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGTGTTGGGTTTCTGTTTaGCATAACAACCAAGGATTG +
Preference number: 4 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLCWVSV*HNNQGL
Trigger: CAATCCTTGGTTGTTATGGCAAACAGAAACCCAACA...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTAACACAGTTCACAATTaGAAAGATACAGAATCAACC +
Preference number: 4 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPNTVHN*KDTEST
Trigger: GGTTGATTCTGTATCTTTGCAATTGTGAACTGTGTT...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp AATTGTTCTGGATTTAAAGGCTTCACATACAGAGAAACATCTCCTTCCATATCTCGACATTTATCCAAATaGTATGAGACCCATCTTTGC +
Preference number: 4 (lower is better)
Translates to: NCSGFKGFTYRETSPSISRHLSK*YETHLC
Trigger: GCAAAGATGGGTCTCATACCATTTGGATAAATGTCG...AGATATGGAAGGAGATGTTTCTCTGTATGTGAAGCCTTTAAATCCAGAACAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGCGACATTTATCCAAATaGTATGAGACCCATCTTTGC +
Preference number: 4 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLRHLSK*YETHLC
Trigger: GCAAAGATGGGTCTCATACCATTTGGATAAATGTCG...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CCA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGATCAGCAGGACTTTATaGTGTCACCTCTTTATTCTA +
Preference number: 4 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWISRTL*CHLFIL
Trigger: TAGAATAAAGAGGTGACACCATAAAGTCCTGCTGAT...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CCA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGAGTCTGTCTTTTTGTTaGGTTTCTGTTTGCCATAAC +
Preference number: 4 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWSLSFC*VSVCHN
Trigger: GTTATGGCAAACAGAAACCCAACAAAAAGACAGACT...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CCA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGTCCACCACTGCAAATTaGTTATTCACTCAACCTATA +
Preference number: 4 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWSTTAN*LFTQPI
Trigger: TATAGGTTGAGTGAATAACCAATTTGCAGTGGTGGA...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR GCA 90 bp AATTGTTCTGGATTTAAAGGCTTCACATACAGAGAAACATCTCCTTCCATATCTATACTGTGTGACATTTaGTCAGTTTGGATTCCATCA +
Preference number: 4 (lower is better)
Translates to: NCSGFKGFTYRETSPSISILCDI*SVWIPS
Trigger: TGATGGAATCCAAACTGAGCAAATGTCACACAGTAT...AGATATGGAAGGAGATGTTTCTCTGTATGTGAAGCCTTTAAATCCAGAACAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGACAGAATGTACTTCATaGTTTAAACCTTTGGCACTA +
Preference number: 4 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWTECTS*FKPLAL
Trigger: TAGTGCCAAAGGTTTAAAGCATGAAGTACATTCTGT...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR GCA 90 bp AATTGTTCTGGATTTAAAGGCTTCACATACAGAGAAACATCTCCTTCCATATCTTTTTCATTTCATGTCTaGAAGATTGCTGCCACAGAT +
Preference number: 4 (lower is better)
Translates to: NCSGFKGFTYRETSPSISFSFHV*KIAATD
Trigger: ATCTGTGGCAGCAATCTTGCAGACATGAAATGAAAA...AGATATGGAAGGAGATGTTTCTCTGTATGTGAAGCCTTTAAATCCAGAACAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CCA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGTTGTCTCTACCAATTTaGACGCTAAATACATGGAAA +
Preference number: 4 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWLSLPI*TLNTWK
Trigger: TTTCCATGTATTTAGCGTCCAAATTGGTAGAGACAA...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS GCA 90 bp GCGAGAGCCCAGCCGCCAGCCTCTCGCCCGGCCAGCACTCGGAGGTaGGGAATGGAGGGGAAAGGTCACGAGAGCGGGGTTACTCTGGGC +
Preference number: 5 (lower is better)
Translates to: ARAQPPASRPASTRR*GMEGKGHESGVTLG
Trigger: GCCCAGAGTAACCCCGCTCTCGTGACCTTTCCCCTCCATTCCGCACCTCCGAGTGCTGGCCGGGCGAGAGGCTGGCGGCTGGGCTCTCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340353.11
ENST00000529023.5
CDS TCA 90 bp ACAGAGGAGCATAGATCTTCAGGGACTCCTCCAGGGCGCCCCCGGTaGTCTGCAGGAAGGAGACCCGGCAGGAAGGGTGCCAAGTGTGGC +
Preference number: 5 (lower is better)
Translates to: TEEHRSSGTPPGRPR*SAGRRPGRKGAKCG
Trigger: GCCACACTTGGCACCCTTCCTGCCGGGTCTCCTTCCTGCAGATCACCGGGGGCGCCCTGGAGGAGTCCCTGAAGATCTATGCTCCTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000305494.6
ENST00000340353.11
ENST00000525018.5
ENST00000526733.5
ENST00000529023.5
CDS-3UTR CAA 90 bp AGCACCAAGGGAGAGGTTGTGACACAGGCAAGTGGACGAAGCTCCCTGAGAGTAGCCCTGATGTCCCTGTaGGTGACCAGATGGTATGTG +
Preference number: 5 (lower is better)
Translates to: STKGEVVTQASGRSSLRVALMSL*VTRWYV
Trigger: CACATACCATCTGGTCACCAACAGGGACATCAGGGC...TACTCTCAGGGAGCTTCGTCCACTTGCCTGTGTCACAACCTCTCCCTTGGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CAA 90 bp AGCACCAAGGGAGAGGTTGTGACACAGGCAAGTGGACGAAGCTCCCTGAGAGTATCCAGAGCCTCTCACTaGAACGGCTGGCTTAAAAGG +
Preference number: 5 (lower is better)
Translates to: STKGEVVTQASGRSSLRVSRASH*NGWLKR
Trigger: CCTTTTAAGCCAGCCGTTCAAGTGAGAGGCTCTGGA...TACTCTCAGGGAGCTTCGTCCACTTGCCTGTGTCACAACCTCTCCCTTGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CAA 90 bp TCTCCAGGTTATGAATGGCCTGTGGTGGGGTTTCTCAGCCTCCACAATCACATGTGTTTCCAGAGGAGATaGGCATGTGAGTTAGCGTGG +
Preference number: 5 (lower is better)
Translates to: SPGYEWPVVGFLSLHNHMCFQRR*ACELAW
Trigger: CCACGCTAACTCACATGCCAATCTCCTCTGGAAACA...CATGTGATTGTGGAGGCTGAGAAACCCCACCACAGGCCATTCATAACCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CAA 90 bp CACGGTCTGACAAGATTAGAATGTTATGCTCTGCAGAGGCAGCAGGCTGGGGGTGGGTTTTTCCTCATGTaGCTCTCTCTTTTGTTCCAC +
Preference number: 5 (lower is better)
Translates to: HGLTRLECYALQRQQAGGGFFLM*LSLLFH
Trigger: GTGGAACAAAAGAGAGAGCAACATGAGGAAAAACCC...ACCCCCAGCCTGCTGCCTCTGCAGAGCATAACATTCTAATCTTGTCAGACCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CAA 90 bp TATGCCTATGGCCTCTATGCCAAGACCAGGGAACATCCTATTATCCACGGTCTGCAGAAGAAAGGAGAATaGGCTTCTCTCTCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: YAYGLYAKTREHPIIHGLQKKGE*ASLSPL
Trigger: CAGGGGAGAGAGAGAAGCCAATTCTCCTTTCTTCTG...CAGACCGTGGATAATAGGATGTTCCCTGGTCTTGGCATAGAGGCCATAGGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CAA 90 bp CACGGTCTGACAAGATTAGAATGTTATGCTCTGCAGAGGCAGCAGGCTGGGGGTTGCAACATCTATGCCTaGGTCCATGTTTGCATATTG +
Preference number: 5 (lower is better)
Translates to: HGLTRLECYALQRQQAGGCNIYA*VHVCIL
Trigger: CAATATGCAAACATGGACCAAGGCATAGATGTTGCA...ACCCCCAGCCTGCTGCCTCTGCAGAGCATAACATTCTAATCTTGTCAGACCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CAA 90 bp TATGCCTATGGCCTCTATGCCAAGACCAGGGAACATCCTATTATCCACGGTCTGCCGAGTAAAGGCTGGTaGGAAAAGTATCTGGACAAG +
Preference number: 5 (lower is better)
Translates to: YAYGLYAKTREHPIIHGLPSKGW*EKYLDK
Trigger: CTTGTCCAGATACTTTTCCAACCAGCCTTTACTCGG...CAGACCGTGGATAATAGGATGTTCCCTGGTCTTGGCATAGAGGCCATAGGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CAA 90 bp TATGCCTATGGCCTCTATGCCAAGACCAGGGAACATCCTATTATCCACGGTCTGCCTTTCAAGCCATCCTaGCACCTGAAAAAGAACATG +
Preference number: 5 (lower is better)
Translates to: YAYGLYAKTREHPIIHGLPFKPS*HLKKNM
Trigger: CATGTTCTTTTTCAGGTGCAAGGATGGCTTGAAAGG...CAGACCGTGGATAATAGGATGTTCCCTGGTCTTGGCATAGAGGCCATAGGCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS CCA 90 bp TCAGGAAAACTCTGTGGGCAACTCTGGTGTTACAGTTGTGTATCTTaGATCCAACCTGGGGATGAAATCCTGAAAGTGTTTAGATGCACC +
Preference number: 5 (lower is better)
Translates to: SGKLCGQLWCYSCVS*IQPGDEILKVFRCT
Trigger: GGTGCATCTAAACACTTTCAGGATTTCATCCCCAGGTTGGATCCAAGATACACAACTGTAACACCAGAGTTGCCCACAGAGTTTTCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305494.6
ENST00000340353.11
ENST00000528861.1
ENST00000531643.1
ENST00000532959.5
CDS-3UTR CAA 90 bp TATGCCTATGGCCTCTATGCCAAGACCAGGGAACATCCTATTATCCACGGTCTGTGCCTTGGTCCATGTTaGCATATTGAATCCACAAAT +
Preference number: 5 (lower is better)
Translates to: YAYGLYAKTREHPIIHGLCLGPC*HIESTN
Trigger: ATTTGTGGATTCAATATGCAAACATGGACCAAGGCA...CAGACCGTGGATAATAGGATGTTCCCTGGTCTTGGCATAGAGGCCATAGGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CAA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCAAAGTCCTCGGATGTaGAGCGCTCGGCGTATCGCA +
Preference number: 5 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWQSPRM*SARRIA
Trigger: TGCGATACGCCGAGCGCTCAACATCCGAGGACTTTG...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340353.11
CDS CCA 90 bp TGTGTAAACAGATGCCTAAATGCAGAAGGGATTCGGAGGCAGCACTaGATCAAGTACCCCACGCTAAACATTCTGATGAAACCTTTAATG +
Preference number: 5 (lower is better)
Translates to: CVNRCLNAEGIRRQH*IKYPTLNILMKPLM
Trigger: CATTAAAGGTTTCATCAGAATGTTTAGCGTGGGGTACTTGATCCAGTGCTGCCTCCGAATCCCTTCTGCATTTAGGCATCTGTTTACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305494.6
ENST00000340353.11
ENST00000532959.5
CDS-3UTR CAA 90 bp ACTTCTCCAATTAAATTGCTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACCCAGAGTCTGTCTTTTaGTTGGGTTTCTGTTTGCCA +
Preference number: 5 (lower is better)
Translates to: TSPIKLLYTKAALSVESYPESVF*LGFCLP
Trigger: TGGCAAACAGAAACCCAACAAAAAGACAGACTCTGG...GTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp AGGAGACGAACACTCGAGCACAACAAGAAAATACTGTGTGACATTTGCTCAGTTCTCCAAAAACAACATTaGGGCCATTGCTCCAGTGGT +
Preference number: 5 (lower is better)
Translates to: RRRTLEHNKKILCDICSVLQKQH*GHCSSG
Trigger: ACCACTGGAGCAATGGCCCAAATGTTGTTTTTGGAG...AACTGAGCAAATGTCACACAGTATTTTCTTGTTGTGCTCGAGTGTTCGTCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CAA 90 bp AGGAGACGAACACTCGAGCACAACAAGAAAATACTGTGTGACATTTGCTCAGTTTTCATGTCTGCAAGATaGCTGCCACAGATTCAGACC +
Preference number: 5 (lower is better)
Translates to: RRRTLEHNKKILCDICSVFMSAR*LPQIQT
Trigger: GGTCTGAATCTGTGGCAGCAATCTTGCAGACATGAA...AACTGAGCAAATGTCACACAGTATTTTCTTGTTGTGCTCGAGTGTTCGTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CAA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTGTCTTTTGCAGCATCTaGGATGGAGCTGGAGGCCAT +
Preference number: 5 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPVFCSI*DGAGGH
Trigger: ATGGCCTCCAGCTCCATCCAAGATGCTGCAAAAGAC...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CAA 90 bp ACTTCTCCAATTAAATTGCTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTGCAACATCTATGCCTaGGTCCATGTTTGCATATTG +
Preference number: 5 (lower is better)
Translates to: TSPIKLLYTKAALSVESYCNIYA*VHVCIL
Trigger: CAATATGCAAACATGGACCAAGGCATAGATGTTGCA...GTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp ACTTCTCCAATTAAATTGCTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACCCTGCTTCAATGCCTTaGAAATACATTGTCTCTACC +
Preference number: 5 (lower is better)
Translates to: TSPIKLLYTKAALSVESYPASMP*KYIVST
Trigger: GGTAGAGACAATGTATTTCAAAGGCATTGAAGCAGG...GTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp CCTTGGACTGAGAATTACACCATCAGTTTCCCTGGTTCCAAGGCTTTTGGACTTTTCATGACAGCAAATTaGCCCTTGGTGAGTCTTAAA +
Preference number: 5 (lower is better)
Translates to: PWTENYTISFPGSKAFGLFMTAN*PLVSLK
Trigger: TTTAAGACTCACCAAGGGCAAATTTGCTGTCATGAA...AAGTCCAAAAGCCTTGGAACCAGGGAAACTGATGGTGTAATTCTCAGTCCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CAA 90 bp GCTAGGCATGTAACTGTCTTAAACAACATCAGTGTTCCCTCAGCAAGGAAAAACACTCTGGTGTTACAGTaGTGTATCTTGGATCCAACC +
Preference number: 5 (lower is better)
Translates to: ARHVTVLNNISVPSARKNTLVLQ*CILDPT
Trigger: GGTTGGATCCAAGATACACAACTGTAACACCAGAGT...GTTTTTCCTTGCTGAGGGAACACTGATGTTGTTTAAGACAGTTACATGCCTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CAA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCACTCTGGTGTTACAGTaGTGTATCTTGGATCCAACC +
Preference number: 5 (lower is better)
Translates to: LYTKAALSVESYFKSITFTLVLQ*CILDPT
Trigger: GGTTGGATCCAAGATACACAACTGTAACACCAGAGT...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCCCATTTGCCCCTAACTaGCCATTAGTACATAGGTTC +
Preference number: 5 (lower is better)
Translates to: LYTKAALSVESYFKSITFPFAPN*PLVHRF
Trigger: GAACCTATGTACTAATGGCAAGTTAGGGGCAAATGG...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp TGCAACTACAGGGCTATTACAAAGTCACCTGAGGCCACTACTTTAAACAGAAACCCTGCTTCAATGCCTTaGAAATACATTGTCTCTACC +
Preference number: 5 (lower is better)
Translates to: CNYRAITKSPEATTLNRNPASMP*KYIVST
Trigger: GGTAGAGACAATGTATTTCAAAGGCATTGAAGCAGG...GTTTCTGTTTAAAGTAGTGGCCTCAGGTGACTTTGTAATAGCCCTGTAGTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CAA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCACAGCAAATTTGCCCTaGGTGAGTCTTAAAAGGAAC +
Preference number: 5 (lower is better)
Translates to: LYTKAALSVESYFKSITFTANLP*VSLKRN
Trigger: GTTCCTTTTAAGACTCACCAAGGGCAAATTTGCTGT...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp ACTTCTCCAATTAAATTGCTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCATGACAGCAAATTaGCCCTTGGTGAGTCTTAAA +
Preference number: 5 (lower is better)
Translates to: TSPIKLLYTKAALSVESYFMTAN*PLVSLK
Trigger: TTTAAGACTCACCAAGGGCAAATTTGCTGTCATGAA...GTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp AATTGTTCTGGATTTAAAGGCTTCACATACAGAGAAACATCTCCTTCCATATCTACAACATTTGGGCCATaGCTCCAGTGGTCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: NCSGFKGFTYRETSPSISTTFGP*LQWSVP
Trigger: GGGAACTGACCACTGGAGCAATGGCCCAAATGTTGT...AGATATGGAAGGAGATGTTTCTCTGTATGTGAAGCCTTTAAATCCAGAACAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CAA 90 bp TATCCCTCTCATATCTCTCTCTATGTATCTCTCTATCCCTATTGTTCTGCCTCTATCTCTCTATCCCTATaGTTCTGCCTCTCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: YPSHISLYVSLYPYCSASISLSL*FCLSGK
Trigger: TTTCCCAGAGAGGCAGAACAATAGGGATAGAGAGAT...AGAGGCAGAACAATAGGGATAGAGAGATACATAGAGAGAGATATGAGAGGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS TCA 90 bp GGTGTTACAGTTGTGTATCTTGGATCCAACCTGGGGATGAAATCCTaGAAGTGTTTAGATGCACCAGTACCAAAAACATCAAGGACTTTT +
Preference number: 5 (lower is better)
Translates to: GVTVVYLGSNLGMKS*KCLDAPVPKTSRTF
Trigger: AAAAGTCCTTGATGTTTTTGGTACTGGTGCATCTAAACACTTTCAGGATTTCATCCCCAGGTTGGATCCAAGATACACAACTGTAACACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305494.6
ENST00000340353.11
ENST00000528861.1
ENST00000531643.1
ENST00000532959.5
CDS CCA 90 bp ATTAATAAGTTACAGTCATCTTCAGGAAAACTCTGTGGGCAACTCTaGTGTTACAGTTGTGTATCTTGGATCCAACCTGGGGATGAAATC +
Preference number: 5 (lower is better)
Translates to: INKLQSSSGKLCGQL*CYSCVSWIQPGDEI
Trigger: GATTTCATCCCCAGGTTGGATCCAAGATACACAACTGTAACACCAGAGTTGCCCACAGAGTTTTCCTGAAGATGACTGTAACTTATTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305494.6
ENST00000340353.11
ENST00000528861.1
ENST00000531643.1
ENST00000532959.5
CDS-3UTR CAA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCGATCCTTTAACAGCATaGCCAAATAAACAGGTCAGT +
Preference number: 5 (lower is better)
Translates to: LYTKAALSVESYFKSITFDPLTA*PNKQVS
Trigger: ACTGACCTGTTTATTTGGCAATGCTGTTAAAGGATC...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp ACTTCTCCAATTAAATTGCTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACGTACCAACCATCGTTTaGATTCCAGTGAATAAAAAG +
Preference number: 5 (lower is better)
Translates to: TSPIKLLYTKAALSVESYVPTIV*IPVNKK
Trigger: CTTTTTATTCACTGGAATCAAAACGATGGTTGGTAC...GTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp ACTTCTCCAATTAAATTGCTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTCAATCTTTACTCGGTaGCTACTAGTTCTAGGATTT +
Preference number: 5 (lower is better)
Translates to: TSPIKLLYTKAALSVESYSIFTR*LLVLGF
Trigger: AAATCCTAGAACTAGTAGCAACCGAGTAAAGATTGA...GTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTTTCAAGCCATCCTaGCACCTGAAAAAGAACATG +
Preference number: 5 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWPFKPS*HLKKNM
Trigger: CATGTTCTTTTTCAGGTGCAAGGATGGCTTGAAAGG...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCATTGTCTCTACCAATTaGGACGCTAAATACATGGAA +
Preference number: 5 (lower is better)
Translates to: LYTKAALSVESYFKSITFIVSTN*DAKYME
Trigger: TTCCATGTATTTAGCGTCCAAATTGGTAGAGACAAT...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCATTTGCCCCTAACTaGCCATTAGTACATAGGTTC +
Preference number: 5 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWPFAPN*PLVHRF
Trigger: GAACCTATGTACTAATGGCAAGTTAGGGGCAAATGG...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCTATTCAAGAAGAAGGTaGGAGAACCTGAATGGAATT +
Preference number: 5 (lower is better)
Translates to: LYTKAALSVESYFKSITFYSRRR*ENLNGI
Trigger: AATTCCATTCAGGTTCTCCAACCTTCTTCTTGAATA...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp CTCTACACGAAAGCAGCACTGTCCGTGGAGAGTTACTTCAAATCTATAACATTCAAACAAAGGACAACTTaGTTGCTGTGTCAAACTACT +
Preference number: 5 (lower is better)
Translates to: LYTKAALSVESYFKSITFKQRTT*LLCQTT
Trigger: AGTAGTTTGACACAGCAACAAAGTTGTCCTTTGTTT...GAATGTTATAGATTTGAAGTAACTCTCCACGGACAGTGCTGCTTTCGTGTAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CAA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGGGGTCATCTCAGTCCTaGACACTCCTTTCTTTGTTA +
Preference number: 5 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWGSSQS*TLLSLL
Trigger: TAACAAAGAAAGGAGTGTCAAGGACTGAGATGACCC...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CAA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGCCCAGGTTCTCAGACTaGAAAATTCAGCCTTGGACT +
Preference number: 5 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLPRFSD*KIQPWT
Trigger: AGTCCAAGGCTGAATTTTCAAGTCTGAGAACCTGGG...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CAA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTATGTTGCTCTCTCTTTaGTTCCACTTTTGCATATGC +
Preference number: 5 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPMLLSL*FHFCIC
Trigger: GCATATGCAAAAGTGGAACAAAAGAGAGAGCAACAT...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTTGCCTTGGTCCATGTTaGCATATTGAATCCACAAAT +
Preference number: 5 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPCLGPC*HIESTN
Trigger: ATTTGTGGATTCAATATGCAAACATGGACCAAGGCA...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGACAGCAAATTTGCCCTaGGTGAGTCTTAAAAGGAAC +
Preference number: 5 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWTANLP*VSLKRN
Trigger: GTTCCTTTTAAGACTCACCAAGGGCAAATTTGCTGT...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTACTTCTCCAATTAAATaGCTCTACACGAAAGCAGCA +
Preference number: 5 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPTSPIK*LYTKAA
Trigger: TGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGT...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGCCAGAGTCTGTCTTTTaGTTGGGTTTCTGTTTGCCA +
Preference number: 5 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLPESVF*LGFCLP
Trigger: TGGCAAACAGAAACCCAACAAAAAGACAGACTCTGG...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTGATCCTTTAACAGCATaGCCAAATAAACAGGTCAGT +
Preference number: 5 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPDPLTA*PNKQVS
Trigger: ACTGACCTGTTTATTTGGCAATGCTGTTAAAGGATC...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp TATCCCTCTCATATCTCTCTCTATGTATCTCTCTATCCCTATTGTTCTGCCTCTGTACCAACCATCGTTTaGATTCCAGTGAATAAAAAG +
Preference number: 5 (lower is better)
Translates to: YPSHISLYVSLYPYCSASVPTIV*IPVNKK
Trigger: CTTTTTATTCACTGGAATCAAAACGATGGTTGGTAC...AGAGGCAGAACAATAGGGATAGAGAGATACATAGAGAGAGATATGAGAGGGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CAA 90 bp TATCCCTCTCATATCTCTCTCTATGTATCTCTCTATCCCTATTGTTCTGCCTCTTTCCATTACATTTTATaGGCCAAAACAGGGTCACAT +
Preference number: 5 (lower is better)
Translates to: YPSHISLYVSLYPYCSASFHYIL*AKTGSH
Trigger: ATGTGACCCTGTTTTGGCCAATAAAATGTAATGGAA...AGAGGCAGAACAATAGGGATAGAGAGATACATAGAGAGAGATATGAGAGGGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CAA 90 bp TGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGCCTTATTCAAGAAGAAGGTaGGAGAACCTGAATGGAATT +
Preference number: 5 (lower is better)
Translates to: WVIIPFATQVLLHNLHWPYSRRR*ENLNGI
Trigger: AATTCCATTCAGGTTCTCCAACCTTCTTCTTGAATA...AGGCCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGATCCACCACTGCAAATaGGTTATTCACTCAACCTAT +
Preference number: 5 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWIHHCK*VIHSTY
Trigger: ATAGGTTGAGTGAATAACCAATTTGCAGTGGTGGAT...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGTATTTATCCTGCCCTTaGGTTCTGAAGAGAGCCTTA +
Preference number: 5 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLYLSCP*VLKRAL
Trigger: TAAGGCTCTCTTCAGAACCAAAGGGCAGGATAAATA...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CAA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGATGTTGCTCTCTCTTTaGTTCCACTTTTGCATATGC +
Preference number: 5 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLMLLSL*FHFCIC
Trigger: GCATATGCAAAAGTGGAACAAAAGAGAGAGCAACAT...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGACTTCTCCAATTAAATaGCTCTACACGAAAGCAGCA +
Preference number: 5 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLTSPIK*LYTKAA
Trigger: TGCTGCTTTCGTGTAGAGCAATTTAATTGGAGAAGT...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp GTATGGGTTATAATTCCTTTTGCAACACAAGTTCTACTGCATAATTTGCACTGGGTTCTACTGCATAATTaGCACTGGCCTAAAAACTTT +
Preference number: 5 (lower is better)
Translates to: VWVIIPFATQVLLHNLHWVLLHN*HWPKNF
Trigger: AAAGTTTTTAGGCCAGTGCAAATTATGCAGTAGAAC...CCAGTGCAAATTATGCAGTAGAACTTGTGTTGCAAAAGGAATTATAACCCATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGATCCACCACTGCAAATaGGTTATTCACTCAACCTAT +
Preference number: 5 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLIHHCK*VIHSTY
Trigger: ATAGGTTGAGTGAATAACCAATTTGCAGTGGTGGAT...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp AATTGTTCTGGATTTAAAGGCTTCACATACAGAGAAACATCTCCTTCCATATCTTCAAACAACTACACTTaGCAGTCTGTCCCAATGAAA +
Preference number: 5 (lower is better)
Translates to: NCSGFKGFTYRETSPSISSNNYT*QSVPMK
Trigger: TTTCATTGGGACAGACTGCAAAGTGTAGTTGTTTGA...AGATATGGAAGGAGATGTTTCTCTGTATGTGAAGCCTTTAAATCCAGAACAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CAA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGTCAAACAACTACACTTaGCAGTCTGTCCCAATGAAA +
Preference number: 5 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLSNNYT*QSVPMK
Trigger: TTTCATTGGGACAGACTGCAAAGTGTAGTTGTTTGA...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGATTGTCTCTACCAATTaGGACGCTAAATACATGGAA +
Preference number: 5 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLIVSTN*DAKYME
Trigger: TTCCATGTATTTAGCGTCCAAATTGGTAGAGACAAT...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS-3UTR CAA 90 bp AATTGTTCTGGATTTAAAGGCTTCACATACAGAGAAACATCTCCTTCCATATCTGTTCTACTGCATAATTaGCACTGGCCTAAAAACTTT +
Preference number: 5 (lower is better)
Translates to: NCSGFKGFTYRETSPSISVLLHN*HWPKNF
Trigger: AAAGTTTTTAGGCCAGTGCAAATTATGCAGTAGAAC...AGATATGGAAGGAGATGTTTCTCTGTATGTGAAGCCTTTAAATCCAGAACAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305494.6
CDS-3UTR CAA 90 bp TCAAAAACACAAAGTTTCTTTGTGTTTGCTCAAACAACTACACTTTGCAGTCTGTCAATCTTTACTCGGTaGCTACTAGTTCTAGGATTT +
Preference number: 5 (lower is better)
Translates to: SKTQSFFVFAQTTTLCSLSIFTR*LLVLGF
Trigger: AAATCCTAGAACTAGTAGCAACCGAGTAAAGATTGA...CAGACTGCAAAGTGTAGTTGTTTGAGCAAACACAAAGAAACTTTGTGTTTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305494.6
ENST00000340353.11
CDS GCA 72 bp CAGCCGCCAGCCTCTCGCCCGGCCAGCACTCGGAGGTaGGGAATGGAGGGGAAAGGTCACGAGAGCGGGGTT +
Preference number: 6 (lower is better)
Translates to: QPPASRPASTRR*GMEGKGHESGV
Trigger: AACCCCGCTCTCGTGACCTTTCCCCTCCATTCCGCACCTCCGAGTGCTGGCCGGGCGAGAGGCTGGCGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340353.11
ENST00000529023.5
CDS TCA 72 bp CATAGATCTTCAGGGACTCCTCCAGGGCGCCCCCGGTaGTCTGCAGGAAGGAGACCCGGCAGGAAGGGTGCC +
Preference number: 6 (lower is better)
Translates to: HRSSGTPPGRPR*SAGRRPGRKGA
Trigger: GGCACCCTTCCTGCCGGGTCTCCTTCCTGCAGATCACCGGGGGCGCCCTGGAGGAGTCCCTGAAGATCTATG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000305494.6
ENST00000340353.11
ENST00000525018.5
ENST00000526733.5
ENST00000529023.5
CDS GCA 72 bp ATCTTCAGGGACTCCTCCAGGGCGCCCCCGGTGATCTaGAGGAAGGAGACCCGGCAGGAAGGGTGCCAAGTG +
Preference number: 6 (lower is better)
Translates to: IFRDSSRAPPVI*RKETRQEGCQV
Trigger: CACTTGGCACCCTTCCTGCCGGGTCTCCTTCCTGCAGATCACCGGGGGCGCCCTGGAGGAGTCCCTGAAGAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000305494.6
ENST00000340353.11
ENST00000525018.5
ENST00000526733.5
ENST00000529023.5
CDS CAA 72 bp GAGAGCGGGGTTACTCTGGGCCAAAGTCCTCGGATGTaGAGCGCTCGGCGTATCGCAGCTCAAGGGGGCGGG +
Preference number: 6 (lower is better)
Translates to: ESGVTLGQSPRM*SARRIAAQGGG
Trigger: CCCGCCCCCTTGAGCTGCGATACGCCGAGCGCTCAACATCCGAGGACTTTGGCCCAGAGTAACCCCGCTCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340353.11
CDS TCA 72 bp AGAGCGGGGTTACTCTGGGCCAAAGTCCTCGGATGTTaGGCGCTCGGCGTATCGCAGCTCAAGGGGGCGGGA +
Preference number: 6 (lower is better)
Translates to: RAGLLWAKVLGC*ALGVSQLKGAG
Trigger: TCCCGCCCCCTTGAGCTGCGATACGCCGAGCGCTCAACATCCGAGGACTTTGGCCCAGAGTAACCCCGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340353.11
CDS CAA 72 bp TCCCAGCTACTCAGGTGGCTGAGGAACAAGAATCGCTaGAACCCGGGAGGTGCAGGTTGTAGTGAGCTGAGA +
Preference number: 6 (lower is better)
Translates to: SQLLRWLRNKNR*NPGGAGCSELR
Trigger: TCTCAGCTCACTACAACCTGCACCTCCCGGGTTCAAGCGATTCTTGTTCCTCAGCCACCTGAGTAGCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525018.5
CDS GCA 72 bp AAGAGAGAAAGTAGCCGAGATGGCTGTGTAAACAGATaGCTAAATGCAGAAGGGATTCGGAGGCAGCACTGG +
Preference number: 6 (lower is better)
Translates to: KRESSRDGCVNR*LNAEGIRRQHW
Trigger: CCAGTGCTGCCTCCGAATCCCTTCTGCATTTAGGCATCTGTTTACACAGCCATCTCGGCTACTTTCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305494.6
ENST00000340353.11
ENST00000532959.5
CDS CCA 72 bp AGATGCCTAAATGCAGAAGGGATTCGGAGGCAGCACTaGATCAAGTACCCCACGCTAAACATTCTGATGAAA +
Preference number: 6 (lower is better)
Translates to: RCLNAEGIRRQH*IKYPTLNILMK
Trigger: TTTCATCAGAATGTTTAGCGTGGGGTACTTGATCCAGTGCTGCCTCCGAATCCCTTCTGCATTTAGGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305494.6
ENST00000340353.11
ENST00000532959.5
CDS CCA 72 bp CTCTGTGGGCAACTCTGGTGTTACAGTTGTGTATCTTaGATCCAACCTGGGGATGAAATCCTGAAAGTGTTT +
Preference number: 6 (lower is better)
Translates to: LCGQLWCYSCVS*IQPGDEILKVF
Trigger: AAACACTTTCAGGATTTCATCCCCAGGTTGGATCCAAGATACACAACTGTAACACCAGAGTTGCCCACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305494.6
ENST00000340353.11
ENST00000528861.1
ENST00000531643.1
ENST00000532959.5
CDS CCA 72 bp TTACAGTCATCTTCAGGAAAACTCTGTGGGCAACTCTaGTGTTACAGTTGTGTATCTTGGATCCAACCTGGG +
Preference number: 6 (lower is better)
Translates to: LQSSSGKLCGQL*CYSCVSWIQPG
Trigger: CCCAGGTTGGATCCAAGATACACAACTGTAACACCAGAGTTGCCCACAGAGTTTTCCTGAAGATGACTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305494.6
ENST00000340353.11
ENST00000528861.1
ENST00000531643.1
ENST00000532959.5
CDS TCA 72 bp GAGGAAAATAGGGAACCTTCCCTGCTTCAATGCCTTTaGAATACATTGTCTCTACCAATTTGGACGCTAAAT +
Preference number: 6 (lower is better)
Translates to: EENREPSLLQCL*NTLSLPIWTLN
Trigger: ATTTAGCGTCCAAATTGGTAGAGACAATGTATTTCAAAGGCATTGAAGCAGGGAAGGTTCCCTATTTTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305494.6
ENST00000340353.11
ENST00000532959.5