RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM132E (Homo sapiens)

Ensembl gene IDs: ENSG00000181291

Ensembl transcript IDs: ENST00000321639.7, ENST00000577271.1, ENST00000631683.2

Found 629 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTaGCTGCCTGCCCTGTGCTGCAGAGGGAAGTCGCAGTCAGCAGGG +
Preference number: 1 (lower is better)
Translates to: GALYSPPGFRLVGHR*LPALCCRGKSQSAG
Trigger: CCCTGCTGACTGCGACTTCCCTCTGCAGCACAGGGCAGGCAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR GCA 90 bp CCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTaGCTGCCCTGTGCTGCAGAGGGAAGTCGCAGTCAGCAGGGTGAC +
Preference number: 1 (lower is better)
Translates to: PSTPLPGSVLWGIGG*LPCAAEGSRSQQGD
Trigger: GTCACCCTGCTGACTGCGACTTCCCTCTGCAGCACAGGGCAGGCAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR CCA 90 bp CTGCCCTGTGCTGCAGAGGGAAGTCGCAGTCAGCAGGGTGACGGGTaGCTAAGGCGTAGTAGTGTTGACCTTGCTGTGGGGGACGGGGAA +
Preference number: 1 (lower is better)
Translates to: LPCAAEGSRSQQGDG*LRRSSVDLAVGDGE
Trigger: TTCCCCGTCCCCCACAGCAAGGTCAACACTACTACGCCTTAGCCACCCGTCACCCTGCTGACTGCGACTTCCCTCTGCAGCACAGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR TCA 90 bp CCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTaGGAACTCAGGAAGGTGCCTGGCTTGGCACCAGACCTCTCTGTA +
Preference number: 1 (lower is better)
Translates to: PLGPCPKPLGQRWES*ELRKVPGLAPDLSV
Trigger: TACAGAGAGGTCTGGTGCCAAGCCAGGCACCTTCCTGAGTTCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR CCA 90 bp GGTTGCTTAAGATGGGAGGAGGTTTGGAAAGGGCAGAACAGAGGCTaGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCC +
Preference number: 1 (lower is better)
Translates to: GCLRWEEVWKGQNRG*GCFPPYEPLEEEPS
Trigger: GGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCCTTTCCAAACCTCCTCCCATCTTAAGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR CCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGCCCGGGACACAGCGTaGGCCCACCTGACCCCAAGC +
Preference number: 2 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPAARDTA*AHLTPS
Trigger: GCTTGGGGTCAGGTGGGCCCACGCTGTGTCCCGGGC...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR TCA 90 bp CCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGATCGCCCAGAGTCAGTGTaGACCGGGGTCCCGGCTGTG +
Preference number: 2 (lower is better)
Translates to: PLCRVSSQVLGGTRMPADRPESV*TGVPAV
Trigger: CACAGCCGGGACCCCGGTTCACACTGACTCTGGGCG...ATCTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR TCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGACAGCGTGGGCCCACCTaGCCCCAAGCTGGACCTCCT +
Preference number: 2 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRQRGPT*PQAGPP
Trigger: AGGAGGTCCAGCTTGGGGTCAGGTGGGCCCACGCTG...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR GCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGTCCCCTTTAGGTCCCTaGCCAAAGCCCTTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLSPLGP*PKPLGQ
Trigger: CTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGA...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR TCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCGCCCAGAGTCAGTGTaGACCGGGGTCCCGGCTGTG +
Preference number: 2 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEERPESV*TGVPAV
Trigger: CACAGCCGGGACCCCGGTTCACACTGACTCTGGGCG...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR CCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGCTCCTTACGAGCCACTaGAGGAAGAGCCCTCCACCT +
Preference number: 2 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLLLTSH*RKSPPP
Trigger: AGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAG...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR TCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCGGAAGGCCCAGACACTaGGGCGGCCCGCTCCGCACG +
Preference number: 2 (lower is better)
Translates to: MPADATTVPLTPRYFVHSGRPRH*GGPLRT
Trigger: CGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCC...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR GCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGCAAGCTGGACCTCCTTaGCTCACTCTTGGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: DLSVESAPRSWEAPECQQQAGPP*LTLGAG
Trigger: CCCTGCCCCAAGAGTGAGGCAAGGAGGTCCAGCTTG...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR CAA 90 bp ATGGCTGTGGGATGGGGTAGGGGCGACACTGGCTCCCTTCTGCATTaGCCCACCCTGAAGTCCCTCACAGCATTCCCTGGTGCCCTCTAC +
Preference number: 2 (lower is better)
Translates to: MAVGWGRGDTGSLLH*PTLKSLTAFPGALY
Trigger: GTAGAGGGCACCAGGGAATGCTGTGAGGGACTTCAGGGTGGGCAAATGCAGAAGGGAGCCAGTGTCGCCCCTACCCCATCCCACAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR CCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGCACCTGACCCCAAGCTaGACCTCCTTGCCTCACTCT +
Preference number: 2 (lower is better)
Translates to: DLSVESAPRSWEAPECQQHLTPS*TSLPHS
Trigger: AGAGTGAGGCAAGGAGGTCCAGCTTGGGGTCAGGTG...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR CCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCGCCCGGGACACAGCGTaGGCCCACCTGACCCCAAGC +
Preference number: 2 (lower is better)
Translates to: MPADATTVPLTPRYFVHSARDTA*AHLTPS
Trigger: GCTTGGGGTCAGGTGGGCCCACGCTGTGTCCCGGGC...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR CCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGACCACAGCAAGATCCTTaGCAGGGCAGGCAGCTGCCA +
Preference number: 2 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRPQQDP*QGRQLP
Trigger: TGGCAGCTGCCTGCCCTGCCAAGGATCTTGCTGTGG...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR TCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCCAGCGTGGGCCCACCTaGCCCCAAGCTGGACCTCCT +
Preference number: 2 (lower is better)
Translates to: MPADATTVPLTPRYFVHSQRGPT*PQAGPP
Trigger: AGGAGGTCCAGCTTGGGGTCAGGTGGGCCCACGCTG...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR GCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGCTTGGGGCAGGGGGTTaGTTAAGATGGGAGGAGGTT +
Preference number: 2 (lower is better)
Translates to: DLSVESAPRSWEAPECQQLGAGG*LRWEEV
Trigger: AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAG...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR CCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCACTCCTTACGAGCCACTaGAGGAAGAGCCCTCCACCT +
Preference number: 2 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPALLTSH*RKSPPP
Trigger: AGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAG...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR CCA 90 bp CCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGATCACCTGACCCCAAGCTaGACCTCCTTGCCTCACTCT +
Preference number: 2 (lower is better)
Translates to: PLCRVSSQVLGGTRMPADHLTPS*TSLPHS
Trigger: AGAGTGAGGCAAGGAGGTCCAGCTTGGGGTCAGGTG...ATCTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR TCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGTCTTTGTGCAGCCTGTaGCACAAGACCCCCACAGAA +
Preference number: 2 (lower is better)
Translates to: DLSVESAPRSWEAPECQQSLCSL*HKTPTE
Trigger: TTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGA...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR TCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCATCTTTGTGCAGCCTGTaGCACAAGACCCCCACAGAA +
Preference number: 2 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPASLCSL*HKTPTE
Trigger: TTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGA...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR CCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGGGGGTTGCTTAAGATaGGAGGAGGTTTGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPAGGCLR*EEVWKG
Trigger: CCCTTTCCAAACCTCCTCCCATCTTAAGCAACCCCC...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR CAA 90 bp CTTAAGATGGGAGGAGGTTTGGAAAGGGCAGAACAGAGGCTGGGGTaGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTG +
Preference number: 2 (lower is better)
Translates to: LKMGGGLERAEQRLG*LSSLRATGGRALHL
Trigger: CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCCTTTCCAAACCTCCTCCCATCTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR TCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGAGGGTAATGGCGTaGGGCGAGGGAAGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: MPADATTVPLTPRYFVHSKRVMA*GEGRPR
Trigger: TCTGGGCCTTCCCTCGCCTCACGCCATTACCCTCTT...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR TCA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCAAGAGGGTAATGGCGTaGGGCGAGGGAAGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPKRVMA*GEGRPR
Trigger: TCTGGGCCTTCCCTCGCCTCACGCCATTACCCTCTT...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR CCA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCGGGCAGAACAGAGGCTaGGGTTGCTTTCCTCCTTAC +
Preference number: 2 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPGQNRG*GCFPPY
Trigger: GTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR CCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCTCCTTGCCTCACTCTTaGGGCAGGGGGTTGCTTAAG +
Preference number: 2 (lower is better)
Translates to: MPADATTVPLTPRYFVHSSLPHS*GRGLLK
Trigger: CTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGA...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR CCA 72 bp GACACGGGGGACGGGAGGCGGGCCCGGGACACAGCGTaGGCCCACCTGACCCCAAGCTGGACCTCCTTGCCT +
Preference number: 3 (lower is better)
Translates to: DTGDGRRARDTA*AHLTPSWTSLP
Trigger: AGGCAAGGAGGTCCAGCTTGGGGTCAGGTGGGCCCACGCTGTGTCCCGGGCCCGCCTCCCGTCCCCCGTGTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR GCA 72 bp CCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTaGCTGCCCTGTGCTGCAGAGGGAAGTCGCAGTCAG +
Preference number: 3 (lower is better)
Translates to: PLPGSVLWGIGG*LPCAAEGSRSQ
Trigger: CTGACTGCGACTTCCCTCTGCAGCACAGGGCAGGCAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR TCA 72 bp CCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTaGGAACTCAGGAAGGTGCCTGGCTTGGCACCAGAC +
Preference number: 3 (lower is better)
Translates to: PCPKPLGQRWES*ELRKVPGLAPD
Trigger: GTCTGGTGCCAAGCCAGGCACCTTCCTGAGTTCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR CAA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGATCCACAGCAAGATCCTaGGCAGGGCAGGCAGCTGCC +
Preference number: 3 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRSTARS*AGQAAA
Trigger: GGCAGCTGCCTGCCCTGCCAAGGATCTTGCTGTGGA...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR CAA 90 bp CCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGATTCCACAGCAAGATCCTaGGCAGGGCAGGCAGCTGCC +
Preference number: 3 (lower is better)
Translates to: PLCRVSSQVLGGTRMPADSTARS*AGQAAA
Trigger: GGCAGCTGCCTGCCCTGCCAAGGATCTTGCTGTGGA...ATCTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR CAA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGGCTCTGGGGTGTGATTaGGCTAGAGATGGATCCAGG +
Preference number: 3 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLALGCD*ARDGSR
Trigger: CCTGGATCCATCTCTAGCCAAATCACACCCCAGAGC...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR CCA 72 bp ACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTaGAGGAAGAGCCCTCCACCTGCAGGGGGCAGAAGA +
Preference number: 3 (lower is better)
Translates to: TEAGVAFLLTSH*RKSPPPAGGRR
Trigger: TCTTCTGCCCCCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR GCA 72 bp GCTGGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTaGTTAAGATGGGAGGAGGTTTGGAAAGGGCAGAAC +
Preference number: 3 (lower is better)
Translates to: AGPPCLTLGAGG*LRWEEVWKGQN
Trigger: GTTCTGCCCTTTCCAAACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR GCA 72 bp CTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGATaGTACAACTGTCCCCCTAACCCCCAGATATTTCGT +
Preference number: 3 (lower is better)
Translates to: LPGPGRHPNASR*YNCPPNPQIFR
Trigger: ACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR CAA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCATCTTGGGGCAGGGGGTaGCTTAAGATGGGAGGAGGT +
Preference number: 3 (lower is better)
Translates to: TVPLTPRYFVHSKILGRASWGRG*LKMGGG
Trigger: ACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGA...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR CAA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCGAACAGAGGCTGGGGTaGCTTTCCTCCTTACGAGCC +
Preference number: 3 (lower is better)
Translates to: MPADATTVPLTPRYFVHSEQRLG*LSSLRA
Trigger: GGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTC...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR-3UTR CAA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCATCCCTGAATATTAGTTaGAGGAAAGTCTTTGTGCAG +
Preference number: 3 (lower is better)
Translates to: TVPLTPRYFVHSKILGRASLNIS*RKVFVQ
Trigger: CTGCACAAAGACTTTCCTCAAACTAATATTCAGGGA...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR CCA 72 bp CGCTTCCATTTATTTAAGAAAAATCCGACACAGTGGTaGGTAGAACCCGAGAGAAAAATGGCTGTGGGATGG +
Preference number: 3 (lower is better)
Translates to: RFHLFKKNPTQW*VEPERKMAVGW
Trigger: CCATCCCACAGCCATTTTTCTCTCGGGTTCTACCCACCACTGTGTCGGATTTTTCTTAAATAAATGGAAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCGCGACAGGCGGTAGCTaGCTGGCAGCACCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGAATGGS*LAAPGW
Trigger: CCAGCCCGGTGCTGCCAGTCAGCTACCGCCTGTCGC...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCCGCCCGCTGTCTCGATaGTGCCGGGCATCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGARPLSR*CRASAP
Trigger: GGGAGCCGATGCCCGGCAGCATCGAGACAGCGGGCG...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAGGGTGCTGGACGGCTaGAGGAGCTCCCGCGCCACC +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGARVLDG*RSSRAT
Trigger: GGTGGCGCGGGAGCTCCTGCAGCCGTCCAGCACCCT...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCGAGGAGAGGAGGTGCTaGCAGGGGAGCCGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGAEERRC*QGSRLP
Trigger: GGGGAGCCGGCTCCCCTGCCAGCACCTCCTCTCCTC...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCGGAAGCGGCAGCTGGTaGCTACGGGGCCGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGAGSGSW*LRGREE
Trigger: CTCCTCTCGGCCCCGTAGGCACCAGCTGCCGCTTCC...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCTCTGCGAGCTGCCGCTaGTGTGGTGGTCGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGASASCR*CGGRRG
Trigger: GCCACGGCGACCACCACAGCAGCGGCAGCTCGCAGA...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAGGAGCCGTCGCCCCTaGCGTGCACCTGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGARSRRP*RAPGSG
Trigger: TCCAGAGCCAGGTGCACGGCAGGGGCGACGGCTCCT...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCGCTGCAGAGAGCTGTTaGCGACCGCGGGTGACGGGG +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGAAAESC*RPRVTG
Trigger: CCCCGTCACCCGCGGTCGCCAACAGCTCTCTGCAGC...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCGCTCCACGCTGGGGCTaGAGGGCGAGGAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGAAPRWG*RARRSW
Trigger: CCAACTCCTCCTCGCCCTCCAGCCCCAGCGTGGAGC...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCGGGAGAGGGCCAGGCTaGCCACCACCTGGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGAGRGPG*PPPGPE
Trigger: TTCAGGCCCAGGTGGTGGCCAGCCTGGCCCTCTCCC...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCCTGCCGCTGCTGTGGTaGTCGCCGTGGCAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGALPLLW*SPWQKA
Trigger: CGCCTTCTGCCACGGCGACCACCACAGCAGCGGCAG...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCCCCCTGCCGTGCACCTaGCTCTGGACGCTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGAPLPCT*LWTLVC
Trigger: GCAGACCAGCGTCCAGAGCCAGGTGCACGGCAGGGG...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
73% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCATGCAGAGGGGCTCCTaGAGCTCACGGCAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGAMQRGS*SSRQLR
Trigger: CCGGAGCTGCCGTGAGCTGCAGGAGCCCCTCTGCAT...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp CGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGCTGCAGGGCCCTCGGGCGGGATaGGCTTGTGCCGGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: RGKAQTLRRPAPHGAKLQGPRAG*ACAGSA
Trigger: TGCGCTACCGGCACAAGCGCATCCCGCCCGAGGGCC...CTGCAGCTTGGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCCGTCGTAGCGGAAGGTaGCCCTGGCGTTCATGGACC +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGARRSGR*PWRSWT
Trigger: GGTCCATGAACGCCAGGGTCACCTTCCGCTACGACG...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp CGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGCTGCAGCGCCCAGAGTCAGTGTaGACCGGGGTCCCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RGKAQTLRRPAPHGAKLQRPESV*TGVPAV
Trigger: CACAGCCGGGACCCCGGTTCACACTGACTCTGGGCG...CTGCAGCTTGGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCCCCGGCTGTCTCAGATaGAGCTCCGGGACCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGAPGCLR*SSGTRE
Trigger: CTCTCTGGTCCCGGAGCTGCATCTGAGACAGCCGGG...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp CGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGCTGCAGAGACCCCGTGGCACCTaGAGGAAGCCGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: RGKAQTLRRPAPHGAKLQRPRGT*RKPVGS
Trigger: GCTGCCCACCGGCTTCCTGCAGGTGCCACGGGGTCT...CTGCAGCTTGGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAAGGGGGTGGTGCCTaGCTCCAGTCCTGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGAKGGGA*LQSCQR
Trigger: ACGCTGGCAGGACTGGAGCCAGGCACCACCCCCTTT...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGCTGCAGTGGTCCATGCTGGTCTaGCCCTCGGGCGGGATGCGC +
Preference number: 4 (lower is better)
Translates to: RGKAQTLRRPAPHGAKLQWSMLV*PSGGMR
Trigger: GCGCATCCCGCCCGAGGGCCAGACCAGCATGGACCA...CTGCAGCTTGGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGAGGGTAATGGCGTaGGGCGAGGGAAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGAKRVMA*GEGRPR
Trigger: TCTGGGCCTTCCCTCGCCTCACGCCATTACCCTCTT...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp CGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGCTGCAGCGGGGATGTCCAGGGTaGTGGACGGCTGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: RGKAQTLRRPAPHGAKLQRGCPG*WTAAGA
Trigger: AGCTCCTGCAGCCGTCCAGCACCCTGGACATCCCCG...CTGCAGCTTGGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAGCTCCGAGGTCACATaGCACTGGCCACTCCGTGAC +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGASSEVT*HWPLRD
Trigger: GTCACGGAGTGGCCAGTGGCATGTGACCTCGGAGCT...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCTGGCCAGGGGCAGGATaGCTTGCACATCCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGAWPGAG*LAHPAE
Trigger: TTCAGCGGGATGTGCAAGCCATCCTGCCCCTGGCCA...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGCTGCAGCTGTGGTGGTCGCCGTaGCAGAAGGCGGGCACGGTT +
Preference number: 4 (lower is better)
Translates to: RGKAQTLRRPAPHGAKLQLWWSP*QKAGTV
Trigger: AACCGTGCCCGCCTTCTGCCACGGCGACCACCACAG...CTGCAGCTTGGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGCTGCAGCCGTGCACCTGGCTCTaGACGCTGGTCTGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: RGKAQTLRRPAPHGAKLQPCTWL*TLVCEL
Trigger: CAGCTCGCAGACCAGCGTCCAGAGCCAGGTGCACGG...CTGCAGCTTGGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp CGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGCTGCAGCGTCAGCTCAGTGACTaGCCGCTCCAGGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RGKAQTLRRPAPHGAKLQRQLSD*PLQVRQ
Trigger: CTGCCTGACCTGGAGCGGGCAGTCACTGAGCTGACG...CTGCAGCTTGGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp CGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGCTGCAGTGGCTGCCTGCCCTGTaGTGCAGAGGGAAGTCGCAG +
Preference number: 4 (lower is better)
Translates to: RGKAQTLRRPAPHGAKLQWLPAL*CRGKSQ
Trigger: CTGCGACTTCCCTCTGCAGCACAGGGCAGGCAGCCA...CTGCAGCTTGGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGCCTGCAGGGTCCTCCTaGGGGGCGGGCGGAACAGGC +
Preference number: 4 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKPAGSS*GAGGTG
Trigger: GCCTGTTCCGCCCGCCCCCCAGGAGGACCCTGCAGG...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGCTGCAGAAAGGGGGTGGTGCCTaGCTCCAGTCCTGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: RGKAQTLRRPAPHGAKLQKGGGA*LQSCQR
Trigger: ACGCTGGCAGGACTGGAGCCAGGCACCACCCCCTTT...CTGCAGCTTGGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGCTGCAGCTGTGGTGGCTAGGATaGTGTGGCTGCTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RGKAQTLRRPAPHGAKLQLWWLG*CGCSQG
Trigger: GCCCTGGGAGCAGCCACACCATCCTAGCCACCACAG...CTGCAGCTTGGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCGGCAGCTCTCAGCGATaGTTAGCTCTGCGCGAAGCA +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGAGSSQR*LALREA
Trigger: TGCTTCGCGCAGAGCTAACCATCGCTGAGAGCTGCC...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGCTGCAGCCTGCAGGAAGCCGGTaGGCAGCGGCAGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: RGKAQTLRRPAPHGAKLQPAGSR*AAAGSL
Trigger: AAGACTTCCTGCCGCTGCCCACCGGCTTCCTGCAGG...CTGCAGCTTGGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCGATCCTCCGCTTGACTaGCTGGCTGGTGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGADPPLD*LAGEVL
Trigger: GAGAACTTCACCAGCCAGTCAGTCAAGCGGAGGATC...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGGGAAGGCCCAGACACTaGGGCGGCCCGCTCCGCACG +
Preference number: 4 (lower is better)
Translates to: DLSVESAPRSWEAPECQQGRPRH*GGPLRT
Trigger: CGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCC...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGCCGGCTAATGCGCCCTaGCCCGAGCCCTTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKPANAP*PEPFLP
Trigger: GGGCAGGAAGGGCTCGGGGCAGGGCGCATTAGCCGG...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGTGCGAGGCGGGCACGTaGGAGCGGACGATGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLCEAGT*ERTMKA
Trigger: GGCCTTCATCGTCCGCTCGCACGTGCCCGCCTCGCA...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCTCTGAGAGCTCAATGTaGAAGGGCAGCTTGGGGACC +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGASESSM*KGSLGT
Trigger: GGTCCCCAAGCTGCCCTTGCACATTGAGCTCTCAGA...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp CGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGCTGCAGCCAGTCCTGCCAGCGTaGTGCTGTCCACCATGTGTG +
Preference number: 4 (lower is better)
Translates to: RGKAQTLRRPAPHGAKLQPVLPA*CCPPCV
Trigger: CACACATGGTGGACAGCAGCACGCTGGCAGGACTGG...CTGCAGCTTGGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGTGCACCCGCAGCGGCTaGCCGTTGCCCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLCTRSG*PLPRNT
Trigger: GGTGTTCCTGGGCAACGGGCAGCCGCTGCGGGTGCA...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGTCTGCGAGCTGCCGCTaGTGTGGTGGTCGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLSASCR*CGGRRG
Trigger: GCCACGGCGACCACCACAGCAGCGGCAGCTCGCAGA...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp CGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGCTGCAGCTGCCTGCCCTGTGCTaGAGAGGGAAGTCGCAGTCA +
Preference number: 4 (lower is better)
Translates to: RGKAQTLRRPAPHGAKLQLPALC*RGKSQS
Trigger: TGACTGCGACTTCCCTCTGCAGCACAGGGCAGGCAG...CTGCAGCTTGGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCGGGCAGAACAGAGGCTaGGGTTGCTTTCCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGAGQNRG*GCFPPY
Trigger: GTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCCAGCAGGGTGACGGGTaGCTAAGGCGTAGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGAQQGDG*LRRSSV
Trigger: AACACTACTACGCCTTAGCCACCCGTCACCCTGCTG...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp CGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGCTGCAGTTTCCAGGGGAGCATTaGGGACGTCGTAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: RGKAQTLRRPAPHGAKLQFPGEH*GRRSGR
Trigger: CCTTCCGCTACGACGTCCTCAATGCTCCCCTGGAAA...CTGCAGCTTGGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCGTAGGGCTTCCTGCTTaGGGAAGCTCAAGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGAVGLPA*GSSRSV
Trigger: AACAGACCTTGAGCTTCCTCAAGCAGGAAGCCCTAC...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGGCCCCGAGCCCTTCCTaGCCAGGACGTCGACTCCAG +
Preference number: 4 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKAPSPS*PGRRLQ
Trigger: CTGGAGTCGACGTCCTGGGCAGGAAGGGCTCGGGGC...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp CGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGCTGCAGGGCGGATCATCAGGTTaGTGTCCAGCCTGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RGKAQTLRRPAPHGAKLQGGSSG*CPACAP
Trigger: AGGAGCACAGGCTGGACAGCAACCTGATGATCCGCC...CTGCAGCTTGGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGGCCTGGCTCCAGTCCTaGCAGCGTGCTGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLAWLQS*QRAAVH
Trigger: GTGGACAGCAGCACGCTGGCAGGACTGGAGCCAGGC...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGTCGTCCCTCCCAAAGTaGACCCGCAGGCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLSSLPK*TRRPTG
Trigger: CCCTGTGGGCCTGCGGGTGCACTTTGGGAGGGACGA...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCCCGAATGCCAGCAGATaGTACAACTGTCCCCCTAAC +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGAPNASR*YNCPPN
Trigger: GTTAGGGGGACAGTTGTAGCATCTGCTGGCATTCGG...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGCGGCTGGGGCAAGGGTaGCGCGGCCAGAACGGGCTG +
Preference number: 4 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRRLGQG*RGQNGL
Trigger: CAGCCCGTTCTGGCCGCGCCACCCTTGCCCCAGCCG...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGATGGGCGTCCCAGGCGCTaGCGGCTACACCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: PLCRVSSQVLGGTRMPADGRPRR*RLHPRS
Trigger: GCTCCGAGGGTGTAGCCGCCAGCGCCTGGGACGCCC...ATCTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGAGGGCGTCCCAGGCGCTaGCGGCTACACCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRGRPRR*RLHPRS
Trigger: GCTCCGAGGGTGTAGCCGCCAGCGCCTGGGACGCCC...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGGCTCCACGCTGGGGCTaGAGGGCGAGGAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKAPRWG*RARRSW
Trigger: CCAACTCCTCCTCGCCCTCCAGCCCCAGCGTGGAGC...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCTCGGATGATGTCGTGTaGAACTGGGTGAAGACCTGC +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGASDDVV*NWVKTC
Trigger: GCAGGTCTTCACCCAGTTCCACACGACATCATCCGA...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGCTGCAGGGCAGCTCTCAGCGATaGTTAGCTCTGCGCGAAGCA +
Preference number: 4 (lower is better)
Translates to: RGKAQTLRRPAPHGAKLQGSSQR*LALREA
Trigger: TGCTTCGCGCAGAGCTAACCATCGCTGAGAGCTGCC...CTGCAGCTTGGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGCAGCGGGTTGCCTGCTaGCGGCGACAGCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLQRVAC*RRQLSL
Trigger: CAAGGAGAGCTGTCGCCGCCAGCAGGCAACCCGCTG...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGCCTGGCTCTGGACGCTaGTCTGCGAGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKPGSGR*SASCRC
Trigger: GCAGCGGCAGCTCGCAGACCAGCGTCCAGAGCCAGG...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGGCGGGGTCCTCGGCTTaGTCTCGGGCTGAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: RLGLLSSLRATGGRALHLAGSSA*SRAEPP
Trigger: GGGCGGCTCAGCCCGAGACCAAGCCGAGGACCCCGC...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGCCTAGAGCCCAGTGCTaGATCTCCCGGCCTCACGGC +
Preference number: 4 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKPRAQC*ISRPHG
Trigger: GCCGTGAGGCCGGGAGATTCAGCACTGGGCTCTAGG...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGGCACCTGCGCAGCTTaGGGCCAGGGAAGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPAGTCAA*GQGSGS
Trigger: GCTGCCGCTTCCCTGGCCGCAAGCTGCGCAGGTGCC...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGCCGCTGTCTCGATGCTaGCGGGCATCGGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: DLSVESAPRSWEAPECQQPLSRC*RASAPA
Trigger: AGCGGGAGCCGATGCCCGGCAGCATCGAGACAGCGG...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCACGCCCGCTGTCTCGATaGTGCCGGGCATCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPARPLSR*CRASAP
Trigger: GGGAGCCGATGCCCGGCAGCATCGAGACAGCGGGCG...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGGAAAAGTTTCCGTaGGGTGCTGAAACTGGCGAC +
Preference number: 4 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGAKEKFP*GAETGD
Trigger: GTCGCCAGTTTCAGCACCGCACGGAAACTTTTCCTT...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCACCAGCTGGTGCCCCCTaGAGGATCTGCGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPAPAGAP*RICEAR
Trigger: CCGCGCCTCGCAGATCCTGCAGGGGGCACCAGCTGG...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGAAGGGCTCGGAGCGCTaGAGAGAGCTGTTGGCGACC +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLKGSER*RELLAT
Trigger: GGTCGCCAACAGCTCTCTGCAGCGCTCCGAGCCCTT...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGACCTGGACCACGGGCTaGGAGGCGGGCACGTGCGAG +
Preference number: 4 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRTWTTG*EAGTCE
Trigger: CTCGCACGTGCCCGCCTCGCAGCCCGTGGTCCAGGT...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGAGGCCCTCGGGCGGGATaGGCTTGTGCCGGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRGPRAG*ACAGSA
Trigger: TGCGCTACCGGCACAAGCGCATCCCGCCCGAGGGCC...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGCCGTCGCCCCTGCCGTaGACCTGGCTCTGGACGCTG +
Preference number: 4 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRPSPLP*TWLWTL
Trigger: CAGCGTCCAGAGCCAGGTGCACGGCAGGGGCGACGG...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGCAGGGAAGCGGCAGCTaGTGCCTACGGGGCCGAGAG +
Preference number: 4 (lower is better)
Translates to: DLSVESAPRSWEAPECQQQGSGS*CLRGRE
Trigger: CTCTCGGCCCCGTAGGCACCAGCTGCCGCTTCCCTG...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCGGCTGGGGCAAGGGTaGCGCGGCCAGAACGGGCTG +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEERLGQG*RGQNGL
Trigger: CAGCCCGTTCTGGCCGCGCCACCCTTGCCCCAGCCG...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGCGGGCCCTGGTTGGCTaGGGCCCGGGTAGTCATAAG +
Preference number: 4 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKRALVG*GPGSHK
Trigger: CTTATGACTACCCGGGCCCCAGCCAACCAGGGCCCG...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGGTCTGTCAGACCCCGTaGCACCTGCAGGAAGCCGGT +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLVCQTP*HLQEAG
Trigger: ACCGGCTTCCTGCAGGTGCCACGGGGTCTGACAGAC...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGGAGAGTGGTCCATGCTaGTCTGGCCCTCGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKESGPC*SGPRAG
Trigger: TCCCGCCCGAGGGCCAGACCAGCATGGACCACTCTC...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGAGCCCGGGACACAGCGTaGGCCCACCTGACCCCAAGC +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRARDTA*AHLTPS
Trigger: GCTTGGGGTCAGGTGGGCCCACGCTGTGTCCCGGGC...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGGCGGGCGGAACAGGCTaGTGCTCCCGATGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRAGGTG*CSRCAA
Trigger: TGCTGCGCATCGGGAGCATCAGCCTGTTCCGCCCGC...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGCCGGGCCTAACATGGTaGCCACCTGGTCAGTGCCCT +
Preference number: 4 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKPGLTW*PPGQCP
Trigger: AGGGCACTGACCAGGTGGTCACCATGTTAGGCCCGG...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCGGCTAATGCGCCCTaGCCCGAGCCCTTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEEPANAP*PEPFLP
Trigger: GGGCAGGAAGGGCTCGGGGCAGGGCGCATTAGCCGG...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGCATCCAACTCAGGGCTaGCGTGGCGCCCGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: DLSVESAPRSWEAPECQQHPTQG*RGARLS
Trigger: AGACAGCCGGGCGCCACGGCAGCCCTGAGTTGGATG...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGTGCGAGGCGGGCACGTaGGAGCGGACGATGAAGGCC +
Preference number: 4 (lower is better)
Translates to: RLGLLSSLRATGGRALHLCEAGT*ERTMKA
Trigger: GGCCTTCATCGTCCGCTCGCACGTGCCCGCCTCGCA...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGGGTGCAGCCACGGCTTaGACTCTGCCGCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RLGLLSSLRATGGRALHLGAATA*TLPPLL
Trigger: GAGGAGCGGCGGCAGAGTGCAAGCCGTGGCTGCACC...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGGCCTGGCTCCAGTCCTaGCAGCGTGCTGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: DLSVESAPRSWEAPECQQAWLQS*QRAAVH
Trigger: GTGGACAGCAGCACGCTGGCAGGACTGGAGCCAGGC...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGATGCACCCGCAGCGGCTaGCCGTTGCCCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRCTRSG*PLPRNT
Trigger: GGTGTTCCTGGGCAACGGGCAGCCGCTGCGGGTGCA...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTGGCGACAGCTCTCCTTaGACCCGCAGCGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVGDSSP*TRSGCP
Trigger: CGGGCAGCCGCTGCGGGTGCAAGGAGAGCTGTCGCC...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGCAGGGAAGCGGCAGCTaGTGCCTACGGGGCCGAGAG +
Preference number: 4 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRQGSGS*CLRGRE
Trigger: CTCTCGGCCCCGTAGGCACCAGCTGCCGCTTCCCTG...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGCCCTCCGAGTCAGTTTaGGCGAGCGGATCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRPSESV*ASGSPR
Trigger: GCGCGGCGATCCGCTCGCCCAAACTGACTCGGAGGG...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGGCGCTTTCTCCAGTCTaGATCAGGGCCCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLALSPV*IRAQAP
Trigger: TGGAGCCTGGGCCCTGATCCAGACTGGAGAAAGCGC...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGATGAGCGGCCAGAGGCGTaGGCGAGTAGCGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: PLCRVSSQVLGGTRMPADERPEA*ASSAER
Trigger: CCTCTCAGCGCTACTCGCCCACGCCTCTGGCCGCTC...ATCTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGATCAGGCGGTAGCTGACTaGCAGCACCGGGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PLCRVSSQVLGGTRMPADQAVAD*QHRAGL
Trigger: CAGGCCAGCCCGGTGCTGCCAGTCAGCTACCGCCTG...ATCTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCACAGGCGGTAGCTGACTaGCAGCACCGGGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPAQAVAD*QHRAGL
Trigger: CAGGCCAGCCCGGTGCTGCCAGTCAGCTACCGCCTG...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGGGCAGCTCCTTGGTCTaGAACACCACGAAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLGSSLV*NTTKGS
Trigger: CGAGCCCTTCGTGGTGTTCCAGACCAAGGAGCTGCC...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGTCCCGCGCCACCACCTaGCTGGTGCTGAAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEESRATT*LVLKGP
Trigger: GGGGCCCTTCAGCACCAGCCAGGTGGTGGCGCGGGA...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTTCCCGCGCCACCACCTaGCTGGTGCTGAAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVSRATT*LVLKGP
Trigger: GGGGCCCTTCAGCACCAGCCAGGTGGTGGCGCGGGA...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGCTGCAGGGCCACTCCGTGACTTaGTACCTAAAAGGGTCACAC +
Preference number: 4 (lower is better)
Translates to: RGKAQTLRRPAPHGAKLQGHSVT*YLKGSH
Trigger: GTGTGACCCTTTTAGGTACCAAGTCACGGAGTGGCC...CTGCAGCTTGGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGGAAGTCTTCTGTGGGTaGCACGACGGGGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKEVFCG*HDGAGG
Trigger: ACCGCCAGCCCCGTCGTGCCACCCACAGAAGACTTC...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGATTGGTCCATGCTGGTCTaGCCCTCGGGCGGGATGCGC +
Preference number: 4 (lower is better)
Translates to: PLCRVSSQVLGGTRMPADWSMLV*PSGGMR
Trigger: GCGCATCCCGCCCGAGGGCCAGACCAGCATGGACCA...ATCTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCACTGCCGCTGCTGTGGTaGTCGCCGTGGCAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPALPLLW*SPWQKA
Trigger: CGCCTTCTGCCACGGCGACCACCACAGCAGCGGCAG...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGACCCCTGCCGTGCACCTaGCTCTGGACGCTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRPLPCT*LWTLVC
Trigger: GCAGACCAGCGTCCAGAGCCAGGTGCACGGCAGGGG...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGGCTTGCGCTTGGAGGTaGGCGAGCTGGCGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRACAWR*ASWRGP
Trigger: AGGACCCCGCCAGCTCGCCCACCTCCAAGCGCAAGC...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGAGGTCCCCAGGCCTCTaGCTCTGGGGTGTGATTTGG +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLRSPGL*LWGVIW
Trigger: CCAAATCACACCCCAGAGCCAGAGGCCTGGGGACCT...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGCGCAGCAGGGGGTGCTaGGTAGGGCTTTCCGCTCGG +
Preference number: 4 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRRSRGC*VGLSAR
Trigger: CCGAGCGGAAAGCCCTACCCAGCACCCCCTGCTGCG...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631683.2
CDS-3UTR TCA 90 bp CCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGATGTTTCCGTGCGGTGCTaGAACTGGCGACGCCGGTCG +
Preference number: 4 (lower is better)
Translates to: PLCRVSSQVLGGTRMPADVSVRC*NWRRRS
Trigger: CGACCGGCGTCGCCAGTTTCAGCACCGCACGGAAAC...ATCTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGTTTCCGTGCGGTGCTaGAACTGGCGACGCCGGTCG +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPAVSVRC*NWRRRS
Trigger: CGACCGGCGTCGCCAGTTTCAGCACCGCACGGAAAC...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCCTAGAGCCCAGTGCTaGATCTCCCGGCCTCACGGC +
Preference number: 4 (lower is better)
Translates to: RLGLLSSLRATGGRALHLPRAQC*ISRPHG
Trigger: GCCGTGAGGCCGGGAGATTCAGCACTGGGCTCTAGG...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp CCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGATGCCCCAGAGAGACGTTaGGGACCGGCAGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PLCRVSSQVLGGTRMPADAPERR*GPAAPW
Trigger: CCAAGGAGCTGCCGGTCCTCAACGTCTCTCTGGGGC...ATCTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGACCACCTGGCTGGTGCTaGAGGGCCCCAGAGAGACGT +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRPPGWC*RAPERR
Trigger: ACGTCTCTCTGGGGCCCTTCAGCACCAGCCAGGTGG...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCGTGCGAGCGGACGATaGAGGCCCGCACCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: RLGLLSSLRATGGRALHLRASGR*RPAPSS
Trigger: ACTGGAAGGTGCGGGCCTTCATCGTCCGCTCGCACG...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGAGGGCAGCCGCTCGGTaGCGCCGAAGTCGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEERAAAR*RRSRPS
Trigger: ACTGGGACGACTTCGGCGTCACCGAGCGGCTGCCCT...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGTCGTGTGGAACTGGGTaGAGACCTGCAGGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLSCGTG*RPAGWH
Trigger: ATGCCACCCTGCAGGTCTTCACCCAGTTCCACACGA...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCAGGCTTGGTCTCGGGCTaGGCCGCCCGAGGAGCCGTC +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRAGLVSG*AARGAV
Trigger: GACGGCTCCTCGGGCGGCTCAGCCCGAGACCAAGCC...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCAGGAAGGCCCAGACACTaGGGCGGCCCGCTCCGCACG +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRAGRPRH*GGPLRT
Trigger: CGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCC...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGGGCGGCAGGAGCTCTTaGCTTCCCGGGCATCCCGGA +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEEGGRSS*LPGHPG
Trigger: TCCGGGATGCCCGGGAAGTCAAGAGCTCCTGCCGCC...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631683.2
CDS-3UTR GCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCGCTGTCTCGATGCTaGCGGGCATCGGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEEPLSRC*RASAPA
Trigger: AGCGGGAGCCGATGCCCGGCAGCATCGAGACAGCGG...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGGCCCCGAGCCCTTCCTaGCCAGGACGTCGACTCCAG +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEEAPSPS*PGRRLQ
Trigger: CTGGAGTCGACGTCCTGGGCAGGAAGGGCTCGGGGC...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCAGACGCCCAGACCGGATaGCCGAGGCGGGCGGCCAGA +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRADAQTG*PRRAAR
Trigger: TCTGGCCGCCCGCCTCGGGCATCCGGTCTGGGCGTC...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGAACCTCCCCCAGCTGGTaGCCCCTGCAGGATCTGCGA +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRTSPSW*PLQDLR
Trigger: TCGCAGATCCTGCAGGGGGCACCAGCTGGGGGAGGT...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGGCATCCCGGAAGGCATaGAGGCGGACACAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: RLGLLSSLRATGGRALHLASRKA*RRTQGS
Trigger: GCTGCCCTGTGTCCGCCTGCATGCCTTCCGGGATGC...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGGCATCCCGGAAGGCATaGAGGCGGACACAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRASRKA*RRTQGS
Trigger: GCTGCCCTGTGTCCGCCTGCATGCCTTCCGGGATGC...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGACCCTGAGTGTGAAGTaGTCCACGCTGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKTLSVK*STLGLE
Trigger: CTCCAGCCCCAGCGTGGAGCACTTCACACTCAGGGT...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGGGTGCAGCCACGGCTTaGACTCTGCCGCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEEGAATA*TLPPLL
Trigger: GAGGAGCGGCGGCAGAGTGCAAGCCGTGGCTGCACC...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGGCTGTCCACCATGTGTaGCACTCGGGGATCGCCCAC +
Preference number: 4 (lower is better)
Translates to: DLSVESAPRSWEAPECQQAVHHV*HSGIAH
Trigger: GTGGGCGATCCCCGAGTGGCACACATGGTGGACAGC...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGCCAGCAGCGCGTACATaGCGATCTCCAGGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLPAART*RSPGLS
Trigger: TGACAGACCTGGAGATCGGCATGTACGCGCTGCTGG...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGTTCCAGCGGGTTGCCTaGTGGCGGCGACAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRFQRVA*WRRQLS
Trigger: GGAGAGCTGTCGCCGCCAGCAGGCAACCCGCTGGAA...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCATTCCAGCGGGTTGCCTaGTGGCGGCGACAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPAFQRVA*WRRQLS
Trigger: GGAGAGCTGTCGCCGCCAGCAGGCAACCCGCTGGAA...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGCGGTTTCCAGCGGGTTaGCTGCTGGCGGCGACAGCT +
Preference number: 4 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRRFPAG*LLAATA
Trigger: AGCTGTCGCCGCCAGCAGGCAACCCGCTGGAAACCG...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTCGCTGGTCTGCGAGCTaGCGCTGCTGTGGTGGTCGC +
Preference number: 4 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVRWSAS*RCCGGR
Trigger: GCGACCACCACAGCAGCGGCAGCTCGCAGACCAGCG...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTAGGAGCCGTCGCCCCTaGCGTGCACCTGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVRSRRP*RAPGSG
Trigger: TCCAGAGCCAGGTGCACGGCAGGGGCGACGGCTCCT...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGTCCCCTTTAGGTCCCTaGCCAAAGCCCTTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKSPLGP*PKPLGQ
Trigger: CTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGA...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGCACAGCATTCCCTGGTaGCCTCTACTCCCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: DLSVESAPRSWEAPECQQHSIPW*PLLPSR
Trigger: CCGGGAGGGGAGTAGAGGGCACCAGGGAATGCTGTG...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGATGCGCAGCAGGGGGTaGTGGGTAGGGCTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: DLSVESAPRSWEAPECQQMRSRG*WVGLSA
Trigger: AGCGGAAAGCCCTACCCAGCACCCCCTGCTGCGCAT...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631683.2
CDS-3UTR CCA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGGCTCCTCGCCTTCCCTaGGGGAACCTGCACAAACCT +
Preference number: 4 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKAPRLP*GNLHKP
Trigger: AGGTTTGTGCAGGTTCCCCCAGGGAAGGCGAGGAGC...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCATCCACCTCCCCCAGCTaGTGCCCCCTGCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPASTSPS*CPLQDL
Trigger: CAGATCCTGCAGGGGGCACCAGCTGGGGGAGGTGGA...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGATCCACCTCCCCCAGCTaGTGCCCCCTGCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRSTSPS*CPLQDL
Trigger: CAGATCCTGCAGGGGGCACCAGCTGGGGGAGGTGGA...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTGAGCGGCCAGAGGCGTaGGCGAGTAGCGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVERPEA*ASSAER
Trigger: CCTCTCAGCGCTACTCGCCCACGCCTCTGGCCGCTC...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGGGATGTCCAGGGTGCTaGACGGCTGCAGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: RLGLLSSLRATGGRALHLGCPGC*TAAGAP
Trigger: GGGAGCTCCTGCAGCCGTCCAGCACCCTGGACATCC...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGATGGATGTCCAGGGTGCTaGACGGCTGCAGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PLCRVSSQVLGGTRMPADGCPGC*TAAGAP
Trigger: GGGAGCTCCTGCAGCCGTCCAGCACCCTGGACATCC...ATCTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGGCTGTAGAGGGAGAGTaGGGCTGTGGTGCCATCACT +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLAVEGE*GCGAIT
Trigger: AGTGATGGCACCACAGCCCCACTCTCCCTCTACAGC...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGGGGAAGGCCCGGTCCTaGGTCACAGTGGCCACATGC +
Preference number: 4 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRGKARS*VTVATC
Trigger: GCATGTGGCCACTGTGACCCAGGACCGGGCCTTCCC...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGGGGAAGGCCCGGTCCTaGGTCACAGTGGCCACATGC +
Preference number: 4 (lower is better)
Translates to: RLGLLSSLRATGGRALHLGKARS*VTVATC
Trigger: GCATGTGGCCACTGTGACCCAGGACCGGGCCTTCCC...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGATCGGGCCCTGGTTGGCTaGGGCCCGGGTAGTCATAAG +
Preference number: 4 (lower is better)
Translates to: PLCRVSSQVLGGTRMPADRALVG*GPGSHK
Trigger: CTTATGACTACCCGGGCCCCAGCCAACCAGGGCCCG...ATCTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGGAGAGTGGTCCATGCTaGTCTGGCCCTCGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: RLGLLSSLRATGGRALHLESGPC*SGPRAG
Trigger: TCCCGCCCGAGGGCCAGACCAGCATGGACCACTCTC...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTCCTGGCTCTGGACGCTaGTCTGCGAGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVPGSGR*SASCRC
Trigger: GCAGCGGCAGCTCGCAGACCAGCGTCCAGAGCCAGG...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCACCGTGCACCTGGCTCTaGACGCTGGTCTGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPAPCTWL*TLVCEL
Trigger: CAGCTCGCAGACCAGCGTCCAGAGCCAGGTGCACGG...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGCCCTGCTACTCCGGCTaGCGCCTCTATGCAATCTCT +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLPCYSG*RLYAIS
Trigger: AGAGATTGCATAGAGGCGCCAGCCGGAGTAGCAGGG...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGTCAGCTCCCAGGTCCTaGGAGGCACCCGAATGCCAG +
Preference number: 4 (lower is better)
Translates to: DLSVESAPRSWEAPECQQSAPRS*EAPECQ
Trigger: CTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGA...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCGCACTTCCCCGGGCTTaGGGGGCCGGTCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGALPRA*GAGLAG
Trigger: GCCTGCCAGACCGGCCCCTCAAGCCCGGGGAAGTGC...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGGATCCTCCGCTTGACTaGCTGGCTGGTGAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLDPPLD*LAGEVL
Trigger: GAGAACTTCACCAGCCAGTCAGTCAAGCGGAGGATC...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGACGTCGTAGCGGAAGGTaGCCCTGGCGTTCATGGACC +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRRRSGR*PWRSWT
Trigger: GGTCCATGAACGCCAGGGTCACCTTCCGCTACGACG...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGGCTGAGGCGGGCATCTaGGAGCTCAATGTGCAAGGG +
Preference number: 4 (lower is better)
Translates to: DLSVESAPRSWEAPECQQAEAGI*ELNVQG
Trigger: CCCTTGCACATTGAGCTCTCAGATGCCCGCCTCAGC...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp CCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGATCCGGGCCTAACATGGTaGCCACCTGGTCAGTGCCCT +
Preference number: 4 (lower is better)
Translates to: PLCRVSSQVLGGTRMPADPGLTW*PPGQCP
Trigger: AGGGCACTGACCAGGTGGTCACCATGTTAGGCCCGG...ATCTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCGGCTTGGTCTCGGGCTaGGCCGCCCGAGGAGCCGTC +
Preference number: 4 (lower is better)
Translates to: MPADATTVPLTPRYFVHSGLVSG*AARGAV
Trigger: GACGGCTCCTCGGGCGGCTCAGCCCGAGACCAAGCC...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCAGGCACCTGCGCAGCTTaGGGCCAGGGAAGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRAGTCAA*GQGSGS
Trigger: GCTGCCGCTTCCCTGGCCGCAAGCTGCGCAGGTGCC...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCGACGCCCAGACCGGATaGCCGAGGCGGGCGGCCAGA +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGDAQTG*PRRAAR
Trigger: TCTGGCCGCCCGCCTCGGGCATCCGGTCTGGGCGTC...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGGAACTCACTCGAGGGTaGCGACTTCCAACGCAATCC +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLELTRG*RLPTQS
Trigger: GGATTGCGTTGGAAGTCGGCACCCTCGAGTGAGTTC...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCACCAGCTGGTGCCCCCTaGAGGATCTGCGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRAPAGAP*RICEAR
Trigger: CCGCGCCTCGCAGATCCTGCAGGGGGCACCAGCTGG...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTCATCCAACTCAGGGCTaGCGTGGCGCCCGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVHPTQG*RGARLS
Trigger: AGACAGCCGGGCGCCACGGCAGCCCTGAGTTGGATG...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAAAGGGCTCGGAGCGCTaGAGAGAGCTGTTGGCGACC +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPAKGSER*RELLAT
Trigger: GGTCGCCAACAGCTCTCTGCAGCGCTCCGAGCCCTT...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGGGCGGATCATCAGGTTaGTGTCCAGCCTGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKGGSSG*CPACAP
Trigger: AGGAGCACAGGCTGGACAGCAACCTGATGATCCGCC...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGACGTCAGCTCAGTGACTaGCCGCTCCAGGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRRQLSD*PLQVRQ
Trigger: CTGCCTGACCTGGAGCGGGCAGTCACTGAGCTGACG...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGACCTGCAGGGTGGCATaGTGGTACTGCAGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: DLSVESAPRSWEAPECQQTCRVA*WYCRVQ
Trigger: CTGCACCCTGCAGTACCAGCATGCCACCCTGCAGGT...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGAACTGGGTGAAGACCTaGAGGGTGGCATGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLNWVKT*RVACWY
Trigger: GTACCAGCATGCCACCCTGCAGGTCTTCACCCAGTT...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGGTCACAGTGGCCACATaGTCATCCAGGCTGCTCACT +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLVTVAT*SSRLLT
Trigger: AGTGAGCAGCCTGGATGAGCATGTGGCCACTGTGAC...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGGCAGCGGCTGCCCGTTaGCCAGGAACACCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEEAAAAR*PGTPSG
Trigger: ACCACTGGGTGTTCCTGGGCAACGGGCAGCCGCTGC...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTGCAGCGGCTGCCCGTTaGCCAGGAACACCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVAAAAR*PGTPSG
Trigger: ACCACTGGGTGTTCCTGGGCAACGGGCAGCCGCTGC...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCAGGCGACAGCTCTCCTTaGACCCGCAGCGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRAGDSSP*TRSGCP
Trigger: CGGGCAGCCGCTGCGGGTGCAAGGAGAGCTGTCGCC...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGATGGGGCATAGGTGGCTaGCTGCCCTGTGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRWGIGG*LPCAAE
Trigger: CTCTGCAGCACAGGGCAGGCAGCCACCTATGCCCCA...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCACAGCATTCCCTGGTaGCCTCTACTCCCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RLGLLSSLRATGGRALHLHSIPW*PLLPSR
Trigger: CCGGGAGGGGAGTAGAGGGCACCAGGGAATGCTGTG...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGGGAGCCGGCTCCCCATaGACGTGTGTGGGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: RLGLLSSLRATGGRALHLGAGSP*TCVGEE
Trigger: TTCTTCCCCCACACACGTCCATGGGGAGCCGGCTCC...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGGCTGCCCCATGTAGATaGGGCTTGGAGAAGCGAGGG +
Preference number: 4 (lower is better)
Translates to: DLSVESAPRSWEAPECQQAAPCR*GLEKRG
Trigger: CCCTCGCTTCTCCAAGCCCCATCTACATGGGGCAGC...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGATAACTCAGGGCTGCCGTaGCGCCCGGCTGTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: PLCRVSSQVLGGTRMPADNSGLP*RPAVSD
Trigger: ATCTGAGACAGCCGGGCGCCACGGCAGCCCTGAGTT...ATCTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGGCCCCAGGCTGGGCTTaGTCACATCCAACTCAGGGC +
Preference number: 4 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRAPGWA*SHPTQG
Trigger: GCCCTGAGTTGGATGTGACCAAGCCCAGCCTGGGGC...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGACAGTCGACGACGACTTaGCCCCAGGCTGGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRQSTTT*PQAGLG
Trigger: ACCAAGCCCAGCCTGGGGCCAAGTCGTCGTCGACTG...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGGGACCGGCAGCTCCTTaGTCTGGAACACCACGAAGG +
Preference number: 4 (lower is better)
Translates to: DLSVESAPRSWEAPECQQGPAAP*SGTPRR
Trigger: CCTTCGTGGTGTTCCAGACCAAGGAGCTGCCGGTCC...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCCCTGCAGGGTCCTCCTaGGGGGCGGGCGGAACAGGC +
Preference number: 4 (lower is better)
Translates to: MPADATTVPLTPRYFVHSPAGSS*GAGGTG
Trigger: GCCTGTTCCGCCCGCCCCCCAGGAGGACCCTGCAGG...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGACTGTGGTGGCTAGGATaGTGTGGCTGCTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRLWWLG*CGCSQG
Trigger: GCCCTGGGAGCAGCCACACCATCCTAGCCACCACAG...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGAAGCTCAAGGTCTGTTaGGCAGCTGTGGTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLKLKVC*AAVVAR
Trigger: CCTAGCCACCACAGCTGCCCAACAGACCTTGAGCTT...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGGGGAGAGTGGGGCTGTaGTGCCATCACTGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKGRVGL*CHHCRR
Trigger: TCTCCTACAGTGATGGCACCACAGCCCCACTCTCCC...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGCAGGAAGTCTTCTGTaGGTGGCACGACGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPAAGSLL*VARRGW
Trigger: CCAGCCCCGTCGTGCCACCCACAGAAGACTTCCTGC...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGGTCTGTCAGACCCCGTaGCACCTGCAGGAAGCCGGT +
Preference number: 4 (lower is better)
Translates to: RLGLLSSLRATGGRALHLVCQTP*HLQEAG
Trigger: ACCGGCTTCCTGCAGGTGCCACGGGGTCTGACAGAC...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCGCGGGGTCCTCGGCTTaGTCTCGGGCTGAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPAGSSA*SRAEPP
Trigger: GGGCGGCTCAGCCCGAGACCAAGCCGAGGACCCCGC...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCATCAGCTCCCAGGTCCTaGGAGGCACCCGAATGCCAG +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPASAPRS*EAPECQ
Trigger: CTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGA...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCAAGGGCAGCCGCTCGGTaGCGCCGAAGTCGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRARAAAR*RRSRPS
Trigger: ACTGGGACGACTTCGGCGTCACCGAGCGGCTGCCCT...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGTTTCCAGGGGAGCATTaGGGACGTCGTAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: DLSVESAPRSWEAPECQQFPGEH*GRRSGR
Trigger: CCTTCCGCTACGACGTCCTCAATGCTCCCCTGGAAA...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGGCTGAGGCGGGCATCTaGGAGCTCAATGTGCAAGGG +
Preference number: 4 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRAEAGI*ELNVQG
Trigger: CCCTTGCACATTGAGCTCTCAGATGCCCGCCTCAGC...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp CCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGATAGCCCTTCACTTGGCTaGGGCGGGCATCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: PLCRVSSQVLGGTRMPADSPSLG*GGHLRA
Trigger: AGCTCTCAGATGCCCGCCTCAGCCAAGTGAAGGGCT...ATCTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCACAGCGTGGGCCCACCTaGCCCCAAGCTGGACCTCCT +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRAQRGPT*PQAGPP
Trigger: AGGAGGTCCAGCTTGGGGTCAGGTGGGCCCACGCTG...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAGGGCAGCCGGCACCTaGGCAGCTTGCGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: MPADATTVPLTPRYFVHSRAAGT*AACGQG
Trigger: TCCCTGGCCGCAAGCTGCGCAGGTGCCGGCTGCCCT...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCGGCTGTCTCAGATaGAGCTCCGGGACCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEEPGCLR*SSGTRE
Trigger: CTCTCTGGTCCCGGAGCTGCATCTGAGACAGCCGGG...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCAGGGTGCTGGACGGCTaGAGGAGCTCCCGCGCCACC +
Preference number: 4 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPRVLDG*RSSRAT
Trigger: GGTGGCGCGGGAGCTCCTGCAGCCGTCCAGCACCCT...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCACCTGGACCACGGGCTaGGAGGCGGGCACGTGCGAG +
Preference number: 4 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPTWTTG*EAGTCE
Trigger: CTCGCACGTGCCCGCCTCGCAGCCCGTGGTCCAGGT...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGACGGTGGCTGTTGAGTaGTTTGCCCCAGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: DLSVESAPRSWEAPECQQTVAVE*FAPVSS
Trigger: GCTGCTGACTGGGGCAAAGCACTCAACAGCCACCGT...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGTCTGAGAGCTCAATGTaGAAGGGCAGCTTGGGGACC +
Preference number: 4 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKSESSM*KGSLGT
Trigger: GGTCCCCAAGCTGCCCTTGCACATTGAGCTCTCAGA...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCACCAGTCCTGCCAGCGTaGTGCTGTCCACCATGTGTG +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPAPVLPA*CCPPCV
Trigger: CACACATGGTGGACAGCAGCACGCTGGCAGGACTGG...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGAGAGTGGGGCTGTGGTaGCATCACTGTAGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: DLSVESAPRSWEAPECQQRVGLW*HHCRRA
Trigger: GGCTCTCCTACAGTGATGGCACCACAGCCCCACTCT...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCCCGTCGCCCCTGCCGTaGACCTGGCTCTGGACGCTG +
Preference number: 4 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPPSPLP*TWLWTL
Trigger: CAGCGTCCAGAGCCAGGTGCACGGCAGGGGCGACGG...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCTGCCTGCCCTGTGCTaGAGAGGGAAGTCGCAGTCA +
Preference number: 4 (lower is better)
Translates to: RLGLLSSLRATGGRALHLLPALC*RGKSQS
Trigger: TGACTGCGACTTCCCTCTGCAGCACAGGGCAGGCAG...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTTGGCTGCCTGCCCTGTaGTGCAGAGGGAAGTCGCAG +
Preference number: 4 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVWLPAL*CRGKSQ
Trigger: CTGCGACTTCCCTCTGCAGCACAGGGCAGGCAGCCA...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGTGGGGCATAGGTGGCTaGCTGCCCTGTGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEEWGIGG*LPCAAE
Trigger: CTCTGCAGCACAGGGCAGGCAGCCACCTATGCCCCA...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTGGAGCCGGCTCCCCATaGACGTGTGTGGGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVGAGSP*TCVGEE
Trigger: TTCTTCCCCCACACACGTCCATGGGGAGCCGGCTCC...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCACCCTCCGAGTCAGTTTaGGCGAGCGGATCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRAPSESV*ASGSPR
Trigger: GCGCGGCGATCCGCTCGCCCAAACTGACTCGGAGGG...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGAGCTCCTCGCCTTCCCTaGGGGAACCTGCACAAACCT +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRAPRLP*GNLHKP
Trigger: AGGTTTGTGCAGGTTCCCCCAGGGAAGGCGAGGAGC...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGAGCTGCCCCATGTAGATaGGGCTTGGAGAAGCGAGGG +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRAAPCR*GLEKRG
Trigger: CCCTCGCTTCTCCAAGCCCCATCTACATGGGGCAGC...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGAACTCAGGGCTGCCGTaGCGCCCGGCTGTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEENSGLP*RPAVSD
Trigger: ATCTGAGACAGCCGGGCGCCACGGCAGCCCTGAGTT...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTCAGTCGACGACGACTTaGCCCCAGGCTGGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVQSTTT*PQAGLG
Trigger: ACCAAGCCCAGCCTGGGGCCAAGTCGTCGTCGACTG...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGGGCAGCTCCTTGGTCTaGAACACCACGAAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRGSSLV*NTTKGS
Trigger: CGAGCCCTTCGTGGTGTTCCAGACCAAGGAGCTGCC...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGAGGACCGGCAGCTCCTTaGTCTGGAACACCACGAAGG +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRGPAAP*SGTPRR
Trigger: CCTTCGTGGTGTTCCAGACCAAGGAGCTGCCGGTCC...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGTGGCCAGGGGCAGGATaGCTTGCACATCCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRWPGAG*LAHPAE
Trigger: TTCAGCGGGATGTGCAAGCCATCCTGCCCCTGGCCA...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCACTCCAGCCCTTCACTTaGCTGAGGCGGGCATCTGAG +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPALQPFT*LRRASE
Trigger: CTCAGATGCCCGCCTCAGCCAAGTGAAGGGCTGGAG...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGGGGAGAGTGGGGCTGTaGTGCCATCACTGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: DLSVESAPRSWEAPECQQGRVGL*CHHCRR
Trigger: TCTCCTACAGTGATGGCACCACAGCCCCACTCTCCC...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGGGCCCACAGGGGTCGTaGCGAGCACACTCTTGCGTT +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEEGPQGS*RAHSCV
Trigger: AACGCAAGAGTGTGCTCGCCACGACCCCTGTGGGCC...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCCGGGTAGTCATAAGTaGGGTCCTCCTCGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: RLGLLSSLRATGGRALHLPGSHK*GPPRPS
Trigger: GGAGGGACGAGGAGGACCCCACTTATGACTACCCGG...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGCTCCTTACGAGCCACTaGAGGAAGAGCCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: DLSVESAPRSWEAPECQQLLTSH*RKSPPP
Trigger: AGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAG...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGTCCTTGCCTCACTCTTaGGGCAGGGGGTTGCTTAAG +
Preference number: 4 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKSLPHS*GRGLLK
Trigger: CTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGA...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGTGTTGACCTTGCTGTaGGGGACGGGGAAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPAVLTLL*GTGKAR
Trigger: CCTTGCCTTCCCCGTCCCCCACAGCAAGGTCAACAC...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTCCGGGTTCCGTCTTGTaGGGCATAGGTGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVPGSVL*GIGGCL
Trigger: CAGGCAGCCACCTATGCCCCACAAGACGGAACCCGG...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGAAAATGGCTGTGGGATaGGGTAGGGGCGACACTGGC +
Preference number: 4 (lower is better)
Translates to: DLSVESAPRSWEAPECQQKMAVG*GRGDTG
Trigger: GCCAGTGTCGCCCCTACCCCATCCCACAGCCATTTT...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCACCACCTGGCTGGTGCTaGAGGGCCCCAGAGAGACGT +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRAPPGWC*RAPERR
Trigger: ACGTCTCTCTGGGGCCCTTCAGCACCAGCCAGGTGG...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCGCGGGCGGAACAGGCTaGTGCTCCCGATGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGAGGTG*CSRCAA
Trigger: TGCTGCGCATCGGGAGCATCAGCCTGTTCCGCCCGC...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGCTTGCACATCCCGCTaGATGACCGTCAGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPAACTSR*MTVSSV
Trigger: CACTGAGCTGACGGTCATTCAGCGGGATGTGCAAGC...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGAGTCAGTGCCCTCGGATaGTGTCGTGTGGAACTGGGT +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRVSALG*CRVELG
Trigger: ACCCAGTTCCACACGACATCATCCGAGGGCACTGAC...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCGGAAGCGGCAGCTGGTaGCTACGGGGCCGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGGSGSW*LRGREE
Trigger: CTCCTCTCGGCCCCGTAGGCACCAGCTGCCGCTTCC...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGAGCTCCGAGGTCACATaGCACTGGCCACTCCGTGAC +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEESSEVT*HWPLRD
Trigger: GTCACGGAGTGGCCAGTGGCATGTGACCTCGGAGCT...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGACGGTGGCTGTTGAGTaGTTTGCCCCAGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RLGLLSSLRATGGRALHLTVAVE*FAPVSS
Trigger: GCTGCTGACTGGGGCAAAGCACTCAACAGCCACCGT...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGATTTCAAAGTCCAGCTaGAAGATCTCCAAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLISKSS*KISKGP
Trigger: GGGCCCCTTGGAGATCTTGCAGCTGGACTTTGAAAT...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGACCTGCAGGGTGGCATaGTGGTACTGCAGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEETCRVA*WYCRVQ
Trigger: CTGCACCCTGCAGTACCAGCATGCCACCCTGCAGGT...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGGTCCTGCCAGCGTGCTaGTGTCCACCATGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEEVLPAC*CPPCVP
Trigger: TGGCACACATGGTGGACAGCAGCACGCTGGCAGGAC...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGCATGCTCATCCAGGCTaGTCACTAGCAGTCCATAGT +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLHAHPG*SLAVHS
Trigger: ACTATGGACTGCTAGTGAGCAGCCTGGATGAGCATG...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAGACCCCGTGGCACCTaGAGGAAGCCGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: MPADATTVPLTPRYFVHSRPRGT*RKPVGS
Trigger: GCTGCCCACCGGCTTCCTGCAGGTGCCACGGGGTCT...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCAGGTGAGAGTGGTCCATaGTGGTCTGGCCCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRAGESGP*WSGPRA
Trigger: CGCCCGAGGGCCAGACCAGCATGGACCACTCTCACC...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCACGGTTTCCAGCGGGTTaGCTGCTGGCGGCGACAGCT +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRARFPAG*LLAATA
Trigger: AGCTGTCGCCGCCAGCAGGCAACCCGCTGGAAACCG...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCCGCTGGTCTGCGAGCTaGCGCTGCTGTGGTGGTCGC +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGRWSAS*RCCGGR
Trigger: GCGACCACCACAGCAGCGGCAGCTCGCAGACCAGCG...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGCGGCTGGCGCCTCTATaGAATCTCTTTGATTCTGCG +
Preference number: 4 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKRLAPL*NLFDSA
Trigger: CGCAGAATCAAAGAGATTGCATAGAGGCGCCAGCCG...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTCAAGCTGGACCTCCTTaGCTCACTCTTGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVQAGPP*LTLGAG
Trigger: CCCTGCCCCAAGAGTGAGGCAAGGAGGTCCAGCTTG...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCGGCCAGGGGCAGCTCTaGCCGCACCAGACAAGTGGC +
Preference number: 4 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPGQGQL*PHQTSG
Trigger: GCCACTTGTCTGGTGCGGGCAGAGCTGCCCCTGGCC...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000631683.2
CDS-3UTR CCA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTCTTGAGGGGCCGGTCTaGCAGGCGGATCATCAGGTT +
Preference number: 4 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVLEGPV*QADHQV
Trigger: AACCTGATGATCCGCCTGCCAGACCGGCCCCTCAAG...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGGAGGTCACATGCCACTaGCCACTCCGTGACTTGGTA +
Preference number: 4 (lower is better)
Translates to: DLSVESAPRSWEAPECQQEVTCH*PLRDLV
Trigger: TACCAAGTCACGGAGTGGCCAGTGGCATGTGACCTC...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCTCCAGCCCTTCACTTaGCTGAGGCGGGCATCTGAG +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEELQPFT*LRRASE
Trigger: CTCAGATGCCCGCCTCAGCCAAGTGAAGGGCTGGAG...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGAACATGGTGACCACCTaGTCAGTGCCCTCGGATGAT +
Preference number: 4 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKNMVTT*SVPSDD
Trigger: ATCATCCGAGGGCACTGACCAGGTGGTCACCATGTT...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCGGGAGAGGGCCAGGCTaGCCACCACCTGGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPGRGPG*PPPGPE
Trigger: TTCAGGCCCAGGTGGTGGCCAGCCTGGCCCTCTCCC...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCAGTGGCTAGGATGGTGTaGCTGCTCCCAGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRAVARMV*LLPGLG
Trigger: GCCCAGCCCTGGGAGCAGCCACACCATCCTAGCCAC...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCATCTGTTGGGCAGCTGTaGTGGCTAGGATGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPASVGQL*WLGWCG
Trigger: GCCACACCATCCTAGCCACCACAGCTGCCCAACAGA...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGGCTGTAGAGGGAGAGTaGGGCTGTGGTGCCATCACT +
Preference number: 4 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRAVEGE*GCGAIT
Trigger: AGTGATGGCACCACAGCCCCACTCTCCCTCTACAGC...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCTGGAGGTGGGCGAGCTaGCGGGGTCCTCGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: MPADATTVPLTPRYFVHSWRWAS*RGPRLG
Trigger: ACCAAGCCGAGGACCCCGCCAGCTCGCCCACCTCCA...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCTGGAGGTGGGCGAGCTaGCGGGGTCCTCGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPWRWAS*RGPRLG
Trigger: ACCAAGCCGAGGACCCCGCCAGCTCGCCCACCTCCA...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCGCTTGCGCTTGGAGGTaGGCGAGCTGGCGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPACAWR*ASWRGP
Trigger: AGGACCCCGCCAGCTCGCCCACCTCCAAGCGCAAGC...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGGGGGGTTGCTTAAGATaGGAGGAGGTTTGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKGGCLR*EEVWKG
Trigger: CCCTTTCCAAACCTCCTCCCATCTTAAGCAACCCCC...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCACAGCAAGATCCTTaGCAGGGCAGGCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEEPQQDP*QGRQLP
Trigger: TGGCAGCTGCCTGCCCTGCCAAGGATCTTGCTGTGG...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAACTCAGGAAGGTGCCTaGCTTGGCACCAGACCTCTC +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPATQEGA*LGTRPL
Trigger: GAGAGGTCTGGTGCCAAGCCAGGCACCTTCCTGAGT...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGCTCTGGGGTGTGATTTaGCTAGAGATGGATCCAGGA +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLLWGVI*LEMDPG
Trigger: TCCTGGATCCATCTCTAGCCAAATCACACCCCAGAG...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGACCAGGCCTCTGGCTCTaGGGTGTGATTTGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRPGLWL*GVIWLE
Trigger: CTCTAGCCAAATCACACCCCAGAGCCAGAGGCCTGG...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGATCCACGGTGGCTGTTaGGTGCTTTGCCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEEIHGGC*VLCPSQ
Trigger: CTGACTGGGGCAAAGCACTCAACAGCCACCGTGGAT...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGGTCAGTGCCCTCGGATaGTGTCGTGTGGAACTGGGT +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEEVSALG*CRVELG
Trigger: ACCCAGTTCCACACGACATCATCCGAGGGCACTGAC...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGTTCCCTGGGGGAACCTaGACAAACCTTGAACTTTTC +
Preference number: 4 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLFPGGT*TNLELF
Trigger: GAAAAGTTCAAGGTTTGTGCAGGTTCCCCCAGGGAA...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCATGCAGAGGGGCTCCTaGAGCTCACGGCAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGMQRGS*SSRQLR
Trigger: CCGGAGCTGCCGTGAGCTGCAGGAGCCCCTCTGCAT...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGGAACTCACTCGAGGGTaGCGACTTCCAACGCAATCC +
Preference number: 4 (lower is better)
Translates to: RLGLLSSLRATGGRALHLELTRG*RLPTQS
Trigger: GGATTGCGTTGGAAGTCGGCACCCTCGAGTGAGTTC...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCACCTCCCCCAGCTGGTaGCCCCTGCAGGATCTGCGA +
Preference number: 4 (lower is better)
Translates to: MPADATTVPLTPRYFVHSTSPSW*PLQDLR
Trigger: TCGCAGATCCTGCAGGGGGCACCAGCTGGGGGAGGT...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCATCCGGGACCAGAGAGTaGAATTCGGGGACACTTTGC +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPASGTRE*NSGTLC
Trigger: GCAAAGTGTCCCCGAATTGCACTCTCTGGTCCCGGA...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCCGGGGATGTCCAGGGTaGTGGACGGCTGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: MPADATTVPLTPRYFVHSRGCPG*WTAAGA
Trigger: AGCTCCTGCAGCCGTCCAGCACCCTGGACATCCCCG...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGATTTCAAAGTCCAGCTaGAAGATCTCCAAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKISKSS*KISKGP
Trigger: GGGCCCCTTGGAGATCTTGCAGCTGGACTTTGAAAT...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGAACTGGGTGAAGACCTaGAGGGTGGCATGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRNWVKT*RVACWY
Trigger: GTACCAGCATGCCACCCTGCAGGTCTTCACCCAGTT...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCCTAGGATGGTGTGGCTaGTCCCAGGGCTGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGLGWCG*SQGWAA
Trigger: TGCGGCCCAGCCCTGGGAGCAGCCACACCATCCTAG...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCCTAGGATGGTGTGGCTaGTCCCAGGGCTGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPLGWCG*SQGWAA
Trigger: TGCGGCCCAGCCCTGGGAGCAGCCACACCATCCTAG...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGTGGCGAGCACACTCTTaGGTTTGGTTTTCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: DLSVESAPRSWEAPECQQWRAHS*VWFSGS
Trigger: GCTGCCAGAAAACCAAACGCAAGAGTGTGCTCGCCA...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCTCGTCCCTCCCAAAGTaGACCCGCAGGCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGSSLPK*TRRPTG
Trigger: CCCTGTGGGCCTGCGGGTGCACTTTGGGAGGGACGA...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCGGTGAGAGTGGTCCATaGTGGTCTGGCCCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGGESGP*WSGPRA
Trigger: CGCCCGAGGGCCAGACCAGCATGGACCACTCTCACC...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGACTTGGGGCAGGGGGTTaGTTAAGATGGGAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRLGAGG*LRWEEV
Trigger: AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAG...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGTCTGTTCATGGGAGCTaGTGCCCCCACCTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEESVHGS*CPHLQS
Trigger: AGACTGGAGGTGGGGGCAGCAGCTCCCATGAACAGA...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGAAGCTCAAGGTCTGTTaGGCAGCTGTGGTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: RLGLLSSLRATGGRALHLKLKVC*AAVVAR
Trigger: CCTAGCCACCACAGCTGCCCAACAGACCTTGAGCTT...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGCAGTCCATAGTCTCGTaGGCTGTAGAGGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRQSIVS*AVEGEW
Trigger: CCACTCTCCCTCTACAGCCCACGAGACTATGGACTG...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCACAGTCCATAGTCTCGTaGGCTGTAGAGGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPAQSIVS*AVEGEW
Trigger: CCACTCTCCCTCTACAGCCCACGAGACTATGGACTG...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCAGGCCCACAGGGGTCGTaGCGAGCACACTCTTGCGTT +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRAGPQGS*RAHSCV
Trigger: AACGCAAGAGTGTGCTCGCCACGACCCCTGTGGGCC...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCAGCAGGAAGTCTTCTGTaGGTGGCACGACGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRAAGSLL*VARRGW
Trigger: CCAGCCCCGTCGTGCCACCCACAGAAGACTTCCTGC...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCCAGCGGGTTGCCTGCTaGCGGCGACAGCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPQRVAC*RRQLSL
Trigger: CAAGGAGAGCTGTCGCCGCCAGCAGGCAACCCGCTG...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCCTGTGGTGGTCGCCGTaGCAGAAGGCGGGCACGGTT +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGLWWSP*QKAGTV
Trigger: AACCGTGCCCGCCTTCTGCCACGGCGACCACCACAG...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGTCCTTGCCTCACTCTTaGGGCAGGGGGTTGCTTAAG +
Preference number: 4 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRSLPHS*GRGLLK
Trigger: CTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGA...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp CCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGATGTAGGGCTTCCTGCTTaGGGAAGCTCAAGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: PLCRVSSQVLGGTRMPADVGLPA*GSSRSV
Trigger: AACAGACCTTGAGCTTCCTCAAGCAGGAAGCCCTAC...ATCTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCAAAGAGGGTAATGGCGTaGGGCGAGGGAAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRAKRVMA*GEGRPR
Trigger: TCTGGGCCTTCCCTCGCCTCACGCCATTACCCTCTT...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGTCTTTGTGCAGCCTGTaGCACAAGACCCCCACAGAA +
Preference number: 4 (lower is better)
Translates to: RLGLLSSLRATGGRALHLSLCSL*HKTPTE
Trigger: TTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGA...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCGCTGTCCACCATGTGTaGCACTCGGGGATCGCCCAC +
Preference number: 4 (lower is better)
Translates to: MPADATTVPLTPRYFVHSAVHHV*HSGIAH
Trigger: GTGGGCGATCCCCGAGTGGCACACATGGTGGACAGC...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCAGTCCTGCCAGCGTGCTaGTGTCCACCATGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRAVLPAC*CPPCVP
Trigger: TGGCACACATGGTGGACAGCAGCACGCTGGCAGGAC...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGGTCACAGTGGCCACATaGTCATCCAGGCTGCTCACT +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEEVTVAT*SSRLLT
Trigger: AGTGAGCAGCCTGGATGAGCATGTGGCCACTGTGAC...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGACGGCTGGCGCCTCTATaGAATCTCTTTGATTCTGCG +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRRLAPL*NLFDSA
Trigger: CGCAGAATCAAAGAGATTGCATAGAGGCGCCAGCCG...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCACAAGCTGGACCTCCTTaGCTCACTCTTGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRAQAGPP*LTLGAG
Trigger: CCCTGCCCCAAGAGTGAGGCAAGGAGGTCCAGCTTG...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCATCCCCTTTAGGTCCCTaGCCAAAGCCCTTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRASPLGP*PKPLGQ
Trigger: CTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGA...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCAGCGCTTTCTCCAGTCTaGATCAGGGCCCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRAALSPV*IRAQAP
Trigger: TGGAGCCTGGGCCCTGATCCAGACTGGAGAAAGCGC...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCGCCCCAGGCTGGGCTTaGTCACATCCAACTCAGGGC +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGAPGWA*SHPTQG
Trigger: GCCCTGAGTTGGATGTGACCAAGCCCAGCCTGGGGC...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTGAGGTCACATGCCACTaGCCACTCCGTGACTTGGTA +
Preference number: 4 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVEVTCH*PLRDLV
Trigger: TACCAAGTCACGGAGTGGCCAGTGGCATGTGACCTC...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGAAACATGGTGACCACCTaGTCAGTGCCCTCGGATGAT +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRNMVTT*SVPSDD
Trigger: ATCATCCGAGGGCACTGACCAGGTGGTCACCATGTT...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCGAAGTCTTCTGTGGGTaGCACGACGGGGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGEVFCG*HDGAGG
Trigger: ACCGCCAGCCCCGTCGTGCCACCCACAGAAGACTTC...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCCCTGCAGGAAGCCGGTaGGCAGCGGCAGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: MPADATTVPLTPRYFVHSPAGSR*AAAGSL
Trigger: AAGACTTCCTGCCGCTGCCCACCGGCTTCCTGCAGG...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCACCACAGCAAGATCCTTaGCAGGGCAGGCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRAPQQDP*QGRQLP
Trigger: TGGCAGCTGCCTGCCCTGCCAAGGATCTTGCTGTGG...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCAGCAGGGTGACGGGTaGCTAAGGCGTAGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEEQQGDG*LRRSSV
Trigger: AACACTACTACGCCTTAGCCACCCGTCACCCTGCTG...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGCAGGTCAGGTGCAAATaGATGCTGTCTTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKQVRCK*MLSFSK
Trigger: CTTTGAGAAAGACAGCATTCATTTGCACCTGACCTG...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCAATCCACGGTGGCTGTTaGGTGCTTTGCCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRAIHGGC*VLCPSQ
Trigger: CTGACTGGGGCAAAGCACTCAACAGCCACCGTGGAT...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAGCCCTTCACTTGGCTaGGGCGGGCATCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: MPADATTVPLTPRYFVHSSPSLG*GGHLRA
Trigger: AGCTCTCAGATGCCCGCCTCAGCCAAGTGAAGGGCT...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGTTCCCTGGGGGAACCTaGACAAACCTTGAACTTTTC +
Preference number: 4 (lower is better)
Translates to: DLSVESAPRSWEAPECQQFPGGT*TNLELF
Trigger: GAAAAGTTCAAGGTTTGTGCAGGTTCCCCCAGGGAA...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAATAAACGCTGTAAGATaGAGAGGGGCTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPAINAVR*RGAPAA
Trigger: AGCTGCAGGAGCCCCTCTGCATCTTACAGCGTTTAT...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGAATAAACGCTGTAAGATaGAGAGGGGCTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRINAVR*RGAPAA
Trigger: AGCTGCAGGAGCCCCTCTGCATCTTACAGCGTTTAT...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCGCTGGTACTGCAGGGTaGAGCCACGGCTTGCACTCT +
Preference number: 4 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPAGTAG*SHGLHS
Trigger: AGAGTGCAAGCCGTGGCTGCACCCTGCAGTACCAGC...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCGCTGGTACTGCAGGGTaGAGCCACGGCTTGCACTCT +
Preference number: 4 (lower is better)
Translates to: MPADATTVPLTPRYFVHSAGTAG*SHGLHS
Trigger: AGAGTGCAAGCCGTGGCTGCACCCTGCAGTACCAGC...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCAAGAGTGGGGCTGTGGTaGCATCACTGTAGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRARVGLW*HHCRRA
Trigger: GGCTCTCCTACAGTGATGGCACCACAGCCCCACTCT...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCATGCTCATCCAGGCTaGTCACTAGCAGTCCATAGT +
Preference number: 4 (lower is better)
Translates to: RLGLLSSLRATGGRALHLHAHPG*SLAVHS
Trigger: ACTATGGACTGCTAGTGAGCAGCCTGGATGAGCATG...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTCCCCATGGACGTGTGTaGGGGAAGAAGAAGAATCGA +
Preference number: 4 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVPHGRV*GKKKNR
Trigger: TCGATTCTTCTTCTTCCCCCACACACGTCCATGGGG...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCCTTGAGGGGCCGGTCTaGCAGGCGGATCATCAGGTT +
Preference number: 4 (lower is better)
Translates to: MPADATTVPLTPRYFVHSLEGPV*QADHQV
Trigger: AACCTGATGATCCGCCTGCCAGACCGGCCCCTCAAG...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGGGCCACTCCGTGACTTaGTACCTAAAAGGGTCACAC +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEEGHSVT*YLKGSH
Trigger: GTGTGACCCTTTTAGGTACCAAGTCACGGAGTGGCC...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCTCCGCTTGACTGACTaGCTGGTGAAGTTCTCCATT +
Preference number: 4 (lower is better)
Translates to: RLGLLSSLRATGGRALHLLRLTD*LVKFSI
Trigger: AATGGAGAACTTCACCAGCCAGTCAGTCAAGCGGAG...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGTGTGCAAGGGCAGCTTaGGGACCCAGACTGTCATTT +
Preference number: 4 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEECARAA*GPRLSF
Trigger: AAATGACAGTCTGGGTCCCCAAGCTGCCCTTGCACA...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTTCGGATGATGTCGTGTaGAACTGGGTGAAGACCTGC +
Preference number: 4 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVSDDVV*NWVKTC
Trigger: GCAGGTCTTCACCCAGTTCCACACGACATCATCCGA...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGCACACTCTTGCGTTTaGTTTTCTGGCAGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPAAHSCV*FSGSSQ
Trigger: CTGAGAGCTGCCAGAAAACCAAACGCAAGAGTGTGC...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCACTCCTTACGAGCCACTaGAGGAAGAGCCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRALLTSH*RKSPPP
Trigger: AGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAG...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCGTGTTGACCTTGCTGTaGGGGACGGGGAAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPVLTLL*GTGKAR
Trigger: CCTTGCCTTCCCCGTCCCCCACAGCAAGGTCAACAC...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
3UTR CAA 72 bp AGCTGGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTaGCTTAAGATGGGAGGAGGTTTGGAAAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: SWTSLPHSWGRG*LKMGGGLERAE
Trigger: TTCTGCCCTTTCCAAACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCGCTTGCACATCCCGCTaGATGACCGTCAGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGACTSR*MTVSSV
Trigger: CACTGAGCTGACGGTCATTCAGCGGGATGTGCAAGC...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCTCGTGTGGAACTGGGTaGAGACCTGCAGGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPSCGTG*RPAGWH
Trigger: ATGCCACCCTGCAGGTCTTCACCCAGTTCCACACGA...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCCCAGCAGCGCGTACATaGCGATCTCCAGGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGPAART*RSPGLS
Trigger: TGACAGACCTGGAGATCGGCATGTACGCGCTGCTGG...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCTCTGTTCATGGGAGCTaGTGCCCCCACCTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: MPADATTVPLTPRYFVHSSVHGS*CPHLQS
Trigger: AGACTGGAGGTGGGGGCAGCAGCTCCCATGAACAGA...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGAAACCTTGAACTTTTCTaGGGTTCAGAGTCTCCGACG +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRNLELF*GSESPT
Trigger: CGTCGGAGACTCTGAACCCCAGAAAAGTTCAAGGTT...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTCTCCGCTTGACTGACTaGCTGGTGAAGTTCTCCATT +
Preference number: 4 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVLRLTD*LVKFSI
Trigger: AATGGAGAACTTCACCAGCCAGTCAGTCAAGCGGAG...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCTCTGTTGGGCAGCTGTaGTGGCTAGGATGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: MPADATTVPLTPRYFVHSSVGQL*WLGWCG
Trigger: GCCACACCATCCTAGCCACCACAGCTGCCCAACAGA...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCCCCTGCTACTCCGGCTaGCGCCTCTATGCAATCTCT +
Preference number: 4 (lower is better)
Translates to: MPADATTVPLTPRYFVHSPCYSG*RLYAIS
Trigger: AGAGATTGCATAGAGGCGCCAGCCGGAGTAGCAGGG...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCCACCTGACCCCAAGCTaGACCTCCTTGCCTCACTCT +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGHLTPS*TSLPHS
Trigger: AGAGTGAGGCAAGGAGGTCCAGCTTGGGGTCAGGTG...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCCACCTGACCCCAAGCTaGACCTCCTTGCCTCACTCT +
Preference number: 4 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPHLTPS*TSLPHS
Trigger: AGAGTGAGGCAAGGAGGTCCAGCTTGGGGTCAGGTG...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCACTCAGGAAGGTGCCTaGCTTGGCACCAGACCTCTC +
Preference number: 4 (lower is better)
Translates to: MPADATTVPLTPRYFVHSTQEGA*LGTRPL
Trigger: GAGAGGTCTGGTGCCAAGCCAGGCACCTTCCTGAGT...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCCCAGGCCTCTGGCTCTaGGGTGTGATTTGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGPGLWL*GVIWLE
Trigger: CTCTAGCCAAATCACACCCCAGAGCCAGAGGCCTGG...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCAAAATGGCTGTGGGATaGGGTAGGGGCGACACTGGC +
Preference number: 4 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPKMAVG*GRGDTG
Trigger: GCCAGTGTCGCCCCTACCCCATCCCACAGCCATTTT...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp CCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGATAATCCGACACAGTGGTaGGTAGAACCCGAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: PLCRVSSQVLGGTRMPADNPTQW*VEPERK
Trigger: TTTTCTCTCGGGTTCTACCCACCACTGTGTCGGATT...ATCTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAAATCCGACACAGTGGTaGGTAGAACCCGAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPANPTQW*VEPERK
Trigger: TTTTCTCTCGGGTTCTACCCACCACTGTGTCGGATT...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAAAAAATCCGACACAGTaGTGGGTAGAACCCGAGAGA +
Preference number: 4 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPAKNPTQ*WVEPER
Trigger: TCTCTCGGGTTCTACCCACCACTGTGTCGGATTTTT...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCCTGCTCCGCCGTAAATaGCTCGAGAGAGACACACAC +
Preference number: 4 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPLLRRK*LERDTH
Trigger: GTGTGTGTCTCTCTCGAGTCATTTACGGCGGAGCAG...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000321639.7
CDS-3UTR GCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCTCCGGGACCAGAGAGTaGAATTCGGGGACACTTTGC +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGSGTRE*NSGTLC
Trigger: GCAAAGTGTCCCCGAATTGCACTCTCTGGTCCCGGA...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCTGGGAGGCACCCGAATaGCAGCAGATGCTACAACTG +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGWEAPE*QQMLQL
Trigger: CAGTTGTAGCATCTGCTGGCATTCGGGTGCCTCCCA...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCTGGGAGGCACCCGAATaGCAGCAGATGCTACAACTG +
Preference number: 4 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPWEAPE*QQMLQL
Trigger: CAGTTGTAGCATCTGCTGGCATTCGGGTGCCTCCCA...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCCATGTAGATGGGGCTTaGAGAAGCGAGGGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPHVDGA*RSEGAR
Trigger: TCTCGCTCCCTCGCTTCTCCAAGCCCCATCTACATG...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCGGGCAGAACAGAGGCTaGGGTTGCTTTCCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGGQNRG*GCFPPY
Trigger: GTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCTCTTTGTGCAGCCTGTaGCACAAGACCCCCACAGAA +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGSLCSL*HKTPTE
Trigger: TTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGA...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCTGGCGAGCACACTCTTaGGTTTGGTTTTCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGWRAHS*VWFSGS
Trigger: GCTGCCAGAAAACCAAACGCAAGAGTGTGCTCGCCA...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCCCGAATGCCAGCAGATaGTACAACTGTCCCCCTAAC +
Preference number: 4 (lower is better)
Translates to: MPADATTVPLTPRYFVHSPNASR*YNCPPN
Trigger: GTTAGGGGGACAGTTGTAGCATCTGCTGGCATTCGG...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCCCCCATGGACGTGTGTaGGGGAAGAAGAAGAATCGA +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGPHGRV*GKKKNR
Trigger: TCGATTCTTCTTCTTCCCCCACACACGTCCATGGGG...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCGGTAGTAACCGCACATaGATAGCGCCGCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGGSNRT*IAPLSS
Trigger: GGAAGAAAGCGGCGCTATCCATGTGCGGTTACTACC...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCGGTAGTAACCGCACATaGATAGCGCCGCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: MPADATTVPLTPRYFVHSGSNRT*IAPLSS
Trigger: GGAAGAAAGCGGCGCTATCCATGTGCGGTTACTACC...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCTGTGCAAGGGCAGCTTaGGGACCCAGACTGTCATTT +
Preference number: 4 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPCARAA*GPRLSF
Trigger: AAATGACAGTCTGGGTCCCCAAGCTGCCCTTGCACA...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCGGGGGTTGCTTAAGATaGGAGGAGGTTTGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGGGCLR*EEVWKG
Trigger: CCCTTTCCAAACCTCCTCCCATCTTAAGCAACCCCC...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCACTCTGGGGTGTGATTTaGCTAGAGATGGATCCAGGA +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRALWGVI*LEMDPG
Trigger: TCCTGGATCCATCTCTAGCCAAATCACACCCCAGAG...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGGAAAAGTTTCCGTaGGGTGCTGAAACTGGCGAC +
Preference number: 4 (lower is better)
Translates to: MPADATTVPLTPRYFVHSKEKFP*GAETGD
Trigger: GTCGCCAGTTTCAGCACCGCACGGAAACTTTTCCTT...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCGCACACTCTTGCGTTTaGTTTTCTGGCAGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGAHSCV*FSGSSQ
Trigger: CTGAGAGCTGCCAGAAAACCAAACGCAAGAGTGTGC...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCACAGGTCAGGTGCAAATaGATGCTGTCTTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRAQVRCK*MLSFSK
Trigger: CTTTGAGAAAGACAGCATTCATTTGCACCTGACCTG...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGTCTATGCAATCTCTTTaGTTCTGCGCATGTAATTGT +
Preference number: 4 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRSMQSL*FCACNC
Trigger: ACAATTACATGCGCAGAATCAAAGAGATTGCATAGA...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGATCAGGTGCAAATGAATaGTGTCTTTCTCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRSGANE*CLSQRK
Trigger: CTTTCTTTGAGAAAGACAGCATTCATTTGCACCTGA...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAACCTTGAACTTTTCTaGGGTTCAGAGTCTCCGACG +
Preference number: 4 (lower is better)
Translates to: MPADATTVPLTPRYFVHSNLELF*GSESPT
Trigger: CGTCGGAGACTCTGAACCCCAGAAAAGTTCAAGGTT...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CCA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAAAATCCGACACAGTaGTGGGTAGAACCCGAGAGA +
Preference number: 4 (lower is better)
Translates to: MPADATTVPLTPRYFVHSKNPTQ*WVEPER
Trigger: TCTCTCGGGTTCTACCCACCACTGTGTCGGATTTTT...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR TCA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTTCTATGCAATCTCTTTaGTTCTGCGCATGTAATTGT +
Preference number: 4 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVSMQSL*FCACNC
Trigger: ACAATTACATGCGCAGAATCAAAGAGATTGCATAGA...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR GCA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCATCAGGTGCAAATGAATaGTGTCTTTCTCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: TVPLTPRYFVHSKILGRASGANE*CLSQRK
Trigger: CTTTCTTTGAGAAAGACAGCATTCATTTGCACCTGA...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS TCA 90 bp CCTCCCGCAGGAAGAAGGCCAGCCGCGTGTGCGACAGGCGGTAGCTaGCTGGCAGCACCGGGCTGGCCTGCGGCCCCGGCGGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: PPAGRRPAACATGGS*LAAPGWPAAPAGWG
Trigger: GCCCCAGCCCGCCGGGGCCGCAGGCCAGCCCGGTGCTGCCAGTCAGCTACCGCCTGTCGCACACGCGGCTGGCCTTCTTCCTGCGGGAGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 90 bp TCTGGATCAGGGCCCAGGCTCCACACAGGCCGGCTCAGCGCCTCCTaGCCAGGCAGCCGCTCGGCGGCTGGGGCAAGGGTGGCGCGGCCA +
Preference number: 5 (lower is better)
Translates to: SGSGPRLHTGRLSAS*PGSRSAAGARVARP
Trigger: TGGCCGCGCCACCCTTGCCCCAGCCGCCGAGCGGCTGCCTGGGCAGGAGGCGCTGAGCCGGCCTGTGTGGAGCCTGGGCCCTGATCCAGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 90 bp ACCCGCTTGCGCTTGGAGGTGGGCGAGCTGGCGGGGTCCTCGGCTTaGTCTCGGGCTGAGCCGCCCGAGGAGCCGTCGCCCCTGCCGTGC +
Preference number: 5 (lower is better)
Translates to: TRLRLEVGELAGSSA*SRAEPPEEPSPLPC
Trigger: GCACGGCAGGGGCGACGGCTCCTCGGGCGGCTCAGCCCGAGACCAAGCCGAGGACCCCGCCAGCTCGCCCACCTCCAAGCGCAAGCGGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS TCA 90 bp CTTGGAGGTGGGCGAGCTGGCGGGGTCCTCGGCTTGGTCTCGGGCTaGGCCGCCCGAGGAGCCGTCGCCCCTGCCGTGCACCTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: LGGGRAGGVLGLVSG*AARGAVAPAVHLAL
Trigger: CAGAGCCAGGTGCACGGCAGGGGCGACGGCTCCTCGGGCGGCTCAGCCCGAGACCAAGCCGAGGACCCCGCCAGCTCGCCCACCTCCAAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 90 bp CCGCCCCCACCCTGTCCCCGGACGCCCGTTCGCCCGCTGTCTCGATaGTGCCGGGCATCGGCTCCCGCTCCCTCCGAGTCAGTTTGGGCG +
Preference number: 5 (lower is better)
Translates to: PPPPCPRTPVRPLSR*CRASAPAPSESVWA
Trigger: CGCCCAAACTGACTCGGAGGGAGCGGGAGCCGATGCCCGGCAGCATCGAGACAGCGGGCGAACGGGCGTCCGGGGACAGGGTGGGGGCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 90 bp CCTCGGCTTGGTCTCGGGCTGAGCCGCCCGAGGAGCCGTCGCCCCTaGCGTGCACCTGGCTCTGGACGCTGGTCTGCGAGCTGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: PRLGLGLSRPRSRRP*RAPGSGRWSASCRC
Trigger: GCAGCGGCAGCTCGCAGACCAGCGTCCAGAGCCAGGTGCACGGCAGGGGCGACGGCTCCTCGGGCGGCTCAGCCCGAGACCAAGCCGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 90 bp CGGTGGGCAGCGGCAGGAAGTCTTCTGTGGGTGGCACGACGGGGCTaGCGGTGCCCGGGCCTGGAGCCTCCGGTGCGGGTAGCGCAGAGC +
Preference number: 5 (lower is better)
Translates to: RWAAAGSLLWVARRG*RCPGLEPPVRVAQS
Trigger: GCTCTGCGCTACCCGCACCGGAGGCTCCAGGCCCGGGCACCGCCAGCCCCGTCGTGCCACCCACAGAAGACTTCCTGCCGCTGCCCACCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 90 bp GCTGAGCCGCCCGAGGAGCCGTCGCCCCTGCCGTGCACCTGGCTCTaGACGCTGGTCTGCGAGCTGCCGCTGCTGTGGTGGTCGCCGTGG +
Preference number: 5 (lower is better)
Translates to: AEPPEEPSPLPCTWL*TLVCELPLLWWSPW
Trigger: CCACGGCGACCACCACAGCAGCGGCAGCTCGCAGACCAGCGTCCAGAGCCAGGTGCACGGCAGGGGCGACGGCTCCTCGGGCGGCTCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 90 bp CCCCCACCCTGTCCCCGGACGCCCGTTCGCCCGCTGTCTCGATGCTaGCGGGCATCGGCTCCCGCTCCCTCCGAGTCAGTTTGGGCGAGC +
Preference number: 5 (lower is better)
Translates to: PPPCPRTPVRPLSRC*RASAPAPSESVWAS
Trigger: GCTCGCCCAAACTGACTCGGAGGGAGCGGGAGCCGATGCCCGGCAGCATCGAGACAGCGGGCGAACGGGCGTCCGGGGACAGGGTGGGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 90 bp CTGGCGACGCCGGTCGCCACCACCCTAGGCGACGCCCAGACCGGATaGCCGAGGCGGGCGGCCAGATGTTTGTCCCCTCGCAAGGCTCGC +
Preference number: 5 (lower is better)
Translates to: LATPVATTLGDAQTG*PRRAARCLSPRKAR
Trigger: GCGAGCCTTGCGAGGGGACAAACATCTGGCCGCCCGCCTCGGGCATCCGGTCTGGGCGTCGCCTAGGGTGGTGGCGACCGGCGTCGCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 90 bp GAGGAGCCGTCGCCCCTGCCGTGCACCTGGCTCTGGACGCTGGTCTaGGAGCTGCCGCTGCTGTGGTGGTCGCCGTGGCAGAAGGCGGGC +
Preference number: 5 (lower is better)
Translates to: EEPSPLPCTWLWTLV*ELPLLWWSPWQKAG
Trigger: GCCCGCCTTCTGCCACGGCGACCACCACAGCAGCGGCAGCTCGCAGACCAGCGTCCAGAGCCAGGTGCACGGCAGGGGCGACGGCTCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 90 bp GCTTGGTCTCGGGCTGAGCCGCCCGAGGAGCCGTCGCCCCTGCCGTaGACCTGGCTCTGGACGCTGGTCTGCGAGCTGCCGCTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: AWSRAEPPEEPSPLP*TWLWTLVCELPLLW
Trigger: CCACAGCAGCGGCAGCTCGCAGACCAGCGTCCAGAGCCAGGTGCACGGCAGGGGCGACGGCTCCTCGGGCGGCTCAGCCCGAGACCAAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 90 bp CACCTGCAGGAAGCCGGTGGGCAGCGGCAGGAAGTCTTCTGTGGGTaGCACGACGGGGCTGGCGGTGCCCGGGCCTGGAGCCTCCGGTGC +
Preference number: 5 (lower is better)
Translates to: HLQEAGGQRQEVFCG*HDGAGGARAWSLRC
Trigger: GCACCGGAGGCTCCAGGCCCGGGCACCGCCAGCCCCGTCGTGCCACCCACAGAAGACTTCCTGCCGCTGCCCACCGGCTTCCTGCAGGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 90 bp CGCCCGAGGAGCCGTCGCCCCTGCCGTGCACCTGGCTCTGGACGCTaGTCTGCGAGCTGCCGCTGCTGTGGTGGTCGCCGTGGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: RPRSRRPCRAPGSGR*SASCRCCGGRRGRR
Trigger: CCTTCTGCCACGGCGACCACCACAGCAGCGGCAGCTCGCAGACCAGCGTCCAGAGCCAGGTGCACGGCAGGGGCGACGGCTCCTCGGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS TCA 90 bp CCGTCGCCGCCTCCTCGGCGCTCGCGCCGGCTGCTCCGCCGTAAATaGCTCGAGAGAGACACACACACTCGCGCTCGCCCGCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PSPPPRRSRRLLRRK*LERDTHTRARPPSS
Trigger: GGAGGAGGGCGGGCGAGCGCGAGTGTGTGTGTCTCTCTCGAGTCATTTACGGCGGAGCAGCCGGCGCGAGCGCCGAGGAGGCGGCGACGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321639.7
CDS GCA 90 bp AGCAGCCGCCGCCGCCGTCGCCGCCTCCTCGGCGCTCGCGCCGGCTaGTCCGCCGTAAATGACTCGAGAGAGACACACACACTCGCGCTC +
Preference number: 5 (lower is better)
Translates to: SSRRRRRRLLGARAG*SAVNDSRETHTLAL
Trigger: GAGCGCGAGTGTGTGTGTCTCTCTCGAGTCATTTACGGCGGAGCAGCCGGCGCGAGCGCCGAGGAGGCGGCGACGGCGGCGGCGGCTGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321639.7
CDS CCA 90 bp TCTCGATGCTGCCGGGCATCGGCTCCCGCTCCCTCCGAGTCAGTTTaGGCGAGCGGATCGCCGCGCCAGTCCGGGCTGCGGGCGGTGAGA +
Preference number: 5 (lower is better)
Translates to: SRCCRASAPAPSESV*ASGSPRQSGLRAVR
Trigger: TCTCACCGCCCGCAGCCCGGACTGGCGCGGCGATCCGCTCGCCCAAACTGACTCGGAGGGAGCGGGAGCCGATGCCCGGCAGCATCGAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 90 bp GTCGCCGTGGCAGAAGGCGGGCACGGTTTCCAGCGGGTTGCCTGCTaGCGGCGACAGCTCTCCTTGCACCCGCAGCGGCTGCCCGTTGCC +
Preference number: 5 (lower is better)
Translates to: VAVAEGGHGFQRVAC*RRQLSLHPQRLPVA
Trigger: GGCAACGGGCAGCCGCTGCGGGTGCAAGGAGAGCTGTCGCCGCCAGCAGGCAACCCGCTGGAAACCGTGCCCGCCTTCTGCCACGGCGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp CGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGCTGCAGCGCAGCGGCTGCCCGTaGCCCAGGAACACCCAGTGG +
Preference number: 5 (lower is better)
Translates to: RGKAQTLRRPAPHGAKLQRSGCP*PRNTQW
Trigger: CCACTGGGTGTTCCTGGGCAACGGGCAGCCGCTGCG...CTGCAGCTTGGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS TCA 90 bp GCCCGGTGGCCGCGGGCGTCCCGGGGGCTACCTAGAGCCCAGTGCTaGATCTCCCGGCCTCACGGCCCAGCTCGAATCCGAACTCACTCG +
Preference number: 5 (lower is better)
Translates to: ARWPRASRGLPRAQC*ISRPHGPARIRTHS
Trigger: CGAGTGAGTTCGGATTCGAGCTGGGCCGTGAGGCCGGGAGATTCAGCACTGGGCTCTAGGTAGCCCCCGGGACGCCCGCGGCCACCGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 90 bp ACCGGCAGCTCCTTGGTCTGGAACACCACGAAGGGCTCGGAGCGCTaGAGAGAGCTGTTGGCGACCGCGGGTGACGGGGGCCGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: TGSSLVWNTTKGSER*RELLATAGDGGRAS
Trigger: GGAGGCGCGGCCCCCGTCACCCGCGGTCGCCAACAGCTCTCTGCAGCGCTCCGAGCCCTTCGTGGTGTTCCAGACCAAGGAGCTGCCGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 90 bp CAGTTCACCGTCAGGCGCTCGGGGATGTCCAGGGTGCTGGACGGCTaGAGGAGCTCCCGCGCCACCACCTGGCTGGTGCTGAAGGGCCCC +
Preference number: 5 (lower is better)
Translates to: QFTVRRSGMSRVLDG*RSSRATTWLVLKGP
Trigger: GGGGCCCTTCAGCACCAGCCAGGTGGTGGCGCGGGAGCTCCTGCAGCCGTCCAGCACCCTGGACATCCCCGAGCGCCTGACGGTGAACTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 90 bp CCCGCACCTTCCAGTTCACCGTCAGGCGCTCGGGGATGTCCAGGGTaGTGGACGGCTGCAGGAGCTCCCGCGCCACCACCTGGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: PAPSSSPSGARGCPG*WTAAGAPAPPPGWC
Trigger: GCACCAGCCAGGTGGTGGCGCGGGAGCTCCTGCAGCCGTCCAGCACCCTGGACATCCCCGAGCGCCTGACGGTGAACTGGAAGGTGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 90 bp CTCCCGATGCGCAGCAGGGGGTGTTCCCGGGCATCCCGGAAGGCATaGAGGCGGACACAGGGCAGCCGCTCGGTGACGCCGAAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: LPMRSRGCSRASRKA*RRTQGSRSVTPKSS
Trigger: GGACGACTTCGGCGTCACCGAGCGGCTGCCCTGTGTCCGCCTGCATGCCTTCCGGGATGCCCGGGAACACCCCCTGCTGCGCATCGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321639.7
CDS GCA 90 bp GTGGTCGCCGTGGCAGAAGGCGGGCACGGTTTCCAGCGGGTTGCCTaGTGGCGGCGACAGCTCTCCTTGCACCCGCAGCGGCTGCCCGTT +
Preference number: 5 (lower is better)
Translates to: VVAVAEGGHGFQRVA*WRRQLSLHPQRLPV
Trigger: AACGGGCAGCCGCTGCGGGTGCAAGGAGAGCTGTCGCCGCCAGCAGGCAACCCGCTGGAAACCGTGCCCGCCTTCTGCCACGGCGACCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 90 bp TGTGGTGGTCGCCGTGGCAGAAGGCGGGCACGGTTTCCAGCGGGTTaGCTGCTGGCGGCGACAGCTCTCCTTGCACCCGCAGCGGCTGCC +
Preference number: 5 (lower is better)
Translates to: CGGRRGRRRARFPAG*LLAATALLAPAAAA
Trigger: GGCAGCCGCTGCGGGTGCAAGGAGAGCTGTCGCCGCCAGCAGGCAACCCGCTGGAAACCGTGCCCGCCTTCTGCCACGGCGACCACCACA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 90 bp CCCTGCCGTGCACCTGGCTCTGGACGCTGGTCTGCGAGCTGCCGCTaGTGTGGTGGTCGCCGTGGCAGAAGGCGGGCACGGTTTCCAGCG +
Preference number: 5 (lower is better)
Translates to: PCRAPGSGRWSASCR*CGGRRGRRRARFPA
Trigger: CGCTGGAAACCGTGCCCGCCTTCTGCCACGGCGACCACCACAGCAGCGGCAGCTCGCAGACCAGCGTCCAGAGCCAGGTGCACGGCAGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 90 bp CGTCGCCCCTGCCGTGCACCTGGCTCTGGACGCTGGTCTGCGAGCTaGCGCTGCTGTGGTGGTCGCCGTGGCAGAAGGCGGGCACGGTTT +
Preference number: 5 (lower is better)
Translates to: RRPCRAPGSGRWSAS*RCCGGRRGRRRARF
Trigger: AAACCGTGCCCGCCTTCTGCCACGGCGACCACCACAGCAGCGGCAGCTCGCAGACCAGCGTCCAGAGCCAGGTGCACGGCAGGGGCGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 90 bp CTCTGGACGCTGGTCTGCGAGCTGCCGCTGCTGTGGTGGTCGCCGTaGCAGAAGGCGGGCACGGTTTCCAGCGGGTTGCCTGCTGGCGGC +
Preference number: 5 (lower is better)
Translates to: LWTLVCELPLLWWSP*QKAGTVSSGLPAGG
Trigger: GCCGCCAGCAGGCAACCCGCTGGAAACCGTGCCCGCCTTCTGCCACGGCGACCACCACAGCAGCGGCAGCTCGCAGACCAGCGTCCAGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 90 bp CCCTCGCAAGGCTCGCTCCTCCGCTCCAGCGCGCTTTCTCCAGTCTaGATCAGGGCCCAGGCTCCACACAGGCCGGCTCAGCGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: PSQGSLLRSSALSPV*IRAQAPHRPAQRLL
Trigger: CAGGAGGCGCTGAGCCGGCCTGTGTGGAGCCTGGGCCCTGATCCAGACTGGAGAAAGCGCGCTGGAGCGGAGGAGCGAGCCTTGCGAGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 90 bp TGGTCTGGAACACCACGAAGGGCTCGGAGCGCTGCAGAGAGCTGTTaGCGACCGCGGGTGACGGGGGCCGCGCCTCCCGCAGGAAGAAGG +
Preference number: 5 (lower is better)
Translates to: WSGTPRRARSAAESC*RPRVTGAAPPAGRR
Trigger: CCTTCTTCCTGCGGGAGGCGCGGCCCCCGTCACCCGCGGTCGCCAACAGCTCTCTGCAGCGCTCCGAGCCCTTCGTGGTGTTCCAGACCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 90 bp CCGTGCACCTGGCTCTGGACGCTGGTCTGCGAGCTGCCGCTGCTGTaGTGGTCGCCGTGGCAGAAGGCGGGCACGGTTTCCAGCGGGTTG +
Preference number: 5 (lower is better)
Translates to: PCTWLWTLVCELPLL*WSPWQKAGTVSSGL
Trigger: CAACCCGCTGGAAACCGTGCCCGCCTTCTGCCACGGCGACCACCACAGCAGCGGCAGCTCGCAGACCAGCGTCCAGAGCCAGGTGCACGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp CGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGCTGCAGGGCCCCAGAGAGACGTaGAGGACCGGCAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: RGKAQTLRRPAPHGAKLQGPRET*RTGSSL
Trigger: CAAGGAGCTGCCGGTCCTCAACGTCTCTCTGGGGCC...CTGCAGCTTGGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCCAGGGGCAGGATGGCTaGCACATCCCGCTGAATGAC +
Preference number: 5 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGAQGQDG*HIPLND
Trigger: GTCATTCAGCGGGATGTGCAAGCCATCCTGCCCCTG...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS TCA 90 bp GGGCATCCCGGAAGGCATGCAGGCGGACACAGGGCAGCCGCTCGGTaGCGCCGAAGTCGTCCCAGTCCCGGCCGGCTACGTAGAACAGCA +
Preference number: 5 (lower is better)
Translates to: GHPGRHAGGHRAAAR*RRSRPSPGRLRRTA
Trigger: TGCTGTTCTACGTAGCCGGCCGGGACTGGGACGACTTCGGCGTCACCGAGCGGCTGCCCTGTGTCCGCCTGCATGCCTTCCGGGATGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS TCA 90 bp CCTTGCACCCGCAGCGGCTGCCCGTTGCCCAGGAACACCCAGTGGTaGGAGTGGTCCATGCTGGTCTGGCCCTCGGGCGGGATGCGCTTG +
Preference number: 5 (lower is better)
Translates to: PCTRSGCPLPRNTQW*EWSMLVWPSGGMRL
Trigger: CAAGCGCATCCCGCCCGAGGGCCAGACCAGCATGGACCACTCTCACCACTGGGTGTTCCTGGGCAACGGGCAGCCGCTGCGGGTGCAAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 90 bp CTGAGGCGGCAGGAGCTCTTGACTTCCCGGGCATCCCGGAAGGCATaGAGGCGGACACAGGGCAGCCGCTCGGTGACGCCGAAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: LRRQELLTSRASRKA*RRTQGSRSVTPKSS
Trigger: GGACGACTTCGGCGTCACCGAGCGGCTGCCCTGTGTCCGCCTGCATGCCTTCCGGGATGCCCGGGAAGTCAAGAGCTCCTGCCGCCTCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631683.2
CDS CCA 90 bp TGCACCTGGCTCTGGACGCTGGTCTGCGAGCTGCCGCTGCTGTGGTaGTCGCCGTGGCAGAAGGCGGGCACGGTTTCCAGCGGGTTGCCT +
Preference number: 5 (lower is better)
Translates to: CTWLWTLVCELPLLW*SPWQKAGTVSSGLP
Trigger: AGGCAACCCGCTGGAAACCGTGCCCGCCTTCTGCCACGGCGACCACCACAGCAGCGGCAGCTCGCAGACCAGCGTCCAGAGCCAGGTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 90 bp CTGCTGGCGGCGACAGCTCTCCTTGCACCCGCAGCGGCTGCCCGTTaGCCAGGAACACCCAGTGGTGAGAGTGGTCCATGCTGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: LLAATALLAPAAAAR*PGTPSGESGPCWSG
Trigger: GCCAGACCAGCATGGACCACTCTCACCACTGGGTGTTCCTGGGCAACGGGCAGCCGCTGCGGGTGCAAGGAGAGCTGTCGCCGCCAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 90 bp CAAGGGTGGCGCGGCCAGAACGGGCTGCCCCATGTAGATGGGGCTTaGAGAAGCGAGGGAGCGAGAAAGCCGGCTAATGCGCCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: QGWRGQNGLPHVDGA*RSEGARKPANAPCP
Trigger: GGGGCAGGGCGCATTAGCCGGCTTTCTCGCTCCCTCGCTTCTCCAAGCCCCATCTACATGGGGCAGCCCGTTCTGGCCGCGCCACCCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 90 bp GAGGGGTCCGAGAGAGCAACAGTCGACGACGACTTGGCCCCAGGCTaGGCTTGGTCACATCCAACTCAGGGCTGCCGTGGCGCCCGGCTG +
Preference number: 5 (lower is better)
Translates to: EGSERATVDDDLAPG*AWSHPTQGCRGARL
Trigger: CAGCCGGGCGCCACGGCAGCCCTGAGTTGGATGTGACCAAGCCCAGCCTGGGGCCAAGTCGTCGTCGACTGTTGCTCTCTCGGACCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGGGGTGCAGCCACGGCTaGCACTCTGCCGCCGCTCCT +
Preference number: 5 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKGCSHG*HSAAAP
Trigger: AGGAGCGGCGGCAGAGTGCAAGCCGTGGCTGCACCC...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS TCA 90 bp AGCAGCGTCTCCCCGAGCACAGCCTCCGTCAGCGGAGACACCACCTaGGGCAGAGCGGGACCGGGGTGGGAGAGAACCAGGAAAGCACAC +
Preference number: 5 (lower is better)
Translates to: SSVSPSTASVSGDTT*GRAGPGWERTRKAH
Trigger: GTGTGCTTTCCTGGTTCTCTCCCACCCCGGTCCCGCTCTGCCTCAGGTGGTGTCTCCGCTGACGGAGGCTGTGCTCGGGGAGACGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577271.1
CDS GCA 90 bp GACGACTTGGCCCCAGGCTGGGCTTGGTCACATCCAACTCAGGGCTaGCGTGGCGCCCGGCTGTCTCAGATGCAGCTCCGGGACCAGAGA +
Preference number: 5 (lower is better)
Translates to: DDLAPGWAWSHPTQG*RGARLSQMQLRDQR
Trigger: TCTCTGGTCCCGGAGCTGCATCTGAGACAGCCGGGCGCCACGGCAGCCCTGAGTTGGATGTGACCAAGCCCAGCCTGGGGCCAAGTCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 90 bp CTTGGCCCCAGGCTGGGCTTGGTCACATCCAACTCAGGGCTGCCGTaGCGCCCGGCTGTCTCAGATGCAGCTCCGGGACCAGAGAGTGCA +
Preference number: 5 (lower is better)
Translates to: LGPRLGLVTSNSGLP*RPAVSDAAPGPESA
Trigger: TGCACTCTCTGGTCCCGGAGCTGCATCTGAGACAGCCGGGCGCCACGGCAGCCCTGAGTTGGATGTGACCAAGCCCAGCCTGGGGCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCGGCACCTGCGCAGCTaGCGGCCAGGGAAGCGGCAG +
Preference number: 5 (lower is better)
Translates to: RLGLLSSLRATGGRALHLRHLRS*RPGKRQ
Trigger: CTGCCGCTTCCCTGGCCGCAAGCTGCGCAGGTGCCG...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGAGCACTTCCCCGGGCTaGAGGGGCCGGTCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: DLSVESAPRSWEAPECQQSTSPG*RGRSGR
Trigger: CCTGCCAGACCGGCCCCTCAAGCCCGGGGAAGTGCT...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp CCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGATCGGCGACAGCTCTCCTaGCACCCGCAGCGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: PLCRVSSQVLGGTRMPADRRQLS*HPQRLP
Trigger: GGGCAGCCGCTGCGGGTGCAAGGAGAGCTGTCGCCG...ATCTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGCGGCGACAGCTCTCCTaGCACCCGCAGCGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRRRQLS*HPQRLP
Trigger: GGGCAGCCGCTGCGGGTGCAAGGAGAGCTGTCGCCG...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGTTGACCCGCTTGCGCTaGGAGGTGGGCGAGCTGGCG +
Preference number: 5 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKLTRLR*EVGELA
Trigger: CGCCAGCTCGCCCACCTCCAAGCGCAAGCGGGTCAA...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp CGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGCTGCAGAGGAAGGTGCCTGGCTaGGCACCAGACCTCTCTGTA +
Preference number: 5 (lower is better)
Translates to: RGKAQTLRRPAPHGAKLQRKVPG*APDLSV
Trigger: TACAGAGAGGTCTGGTGCCAAGCCAGGCACCTTCCT...CTGCAGCTTGGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 90 bp CAGCGGAGACACCACCTTAAAGGGGGTGGTGCCTGGCTCCAGTCCTaGCAGCGTGCTGCTGTCCACCATGTGTGCCACTCGGGGATCGCC +
Preference number: 5 (lower is better)
Translates to: QRRHHLKGGGAWLQS*QRAAVHHVCHSGIA
Trigger: GGCGATCCCCGAGTGGCACACATGGTGGACAGCAGCACGCTGGCAGGACTGGAGCCAGGCACCACCCCCTTTAAGGTGGTGTCTCCGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 90 bp AGCGCGTACATGCCGATCTCCAGGTCTGTCAGACCCCGTGGCACCTaGAGGAAGCCGGTGGGCAGCGGCAGGAAGTCTTCTGTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: SAYMPISRSVRPRGT*RKPVGSGRKSSVGG
Trigger: GCCACCCACAGAAGACTTCCTGCCGCTGCCCACCGGCTTCCTGCAGGTGCCACGGGGTCTGACAGACCTGGAGATCGGCATGTACGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 90 bp TCCGAGAGAGCAACAGTCGACGACGACTTGGCCCCAGGCTGGGCTTaGTCACATCCAACTCAGGGCTGCCGTGGCGCCCGGCTGTCTCAG +
Preference number: 5 (lower is better)
Translates to: SERATVDDDLAPGWA*SHPTQGCRGARLSQ
Trigger: CTGAGACAGCCGGGCGCCACGGCAGCCCTGAGTTGGATGTGACCAAGCCCAGCCTGGGGCCAAGTCGTCGTCGACTGTTGCTCTCTCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 90 bp GCCCAGCAGCGCGTACATGCCGATCTCCAGGTCTGTCAGACCCCGTaGCACCTGCAGGAAGCCGGTGGGCAGCGGCAGGAAGTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: AQQRVHADLQVCQTP*HLQEAGGQRQEVFC
Trigger: ACAGAAGACTTCCTGCCGCTGCCCACCGGCTTCCTGCAGGTGCCACGGGGTCTGACAGACCTGGAGATCGGCATGTACGCGCTGCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTCGGCACCTGCGCAGCTaGCGGCCAGGGAAGCGGCAG +
Preference number: 5 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVRHLRS*RPGKRQ
Trigger: CTGCCGCTTCCCTGGCCGCAAGCTGCGCAGGTGCCG...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GGCGTGAGGCGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCGACGTCGACTCCAGCTaGATGACCATAAACGCTGTA +
Preference number: 5 (lower is better)
Translates to: GVRRGKAQTLRRPAPHGADVDSS*MTINAV
Trigger: TACAGCGTTTATGGTCATCAAGCTGGAGTCGACGTC...GGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCGCCTCACGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGACGGTTTCCAGCGGGTaGCCTGCTGGCGGCGACAGC +
Preference number: 5 (lower is better)
Translates to: DLSVESAPRSWEAPECQQTVSSG*PAGGDS
Trigger: GCTGTCGCCGCCAGCAGGCAACCCGCTGGAAACCGT...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp CGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGCTGCAGGCTCTGGGGTGTGATTaGGCTAGAGATGGATCCAGG +
Preference number: 5 (lower is better)
Translates to: RGKAQTLRRPAPHGAKLQALGCD*ARDGSR
Trigger: CCTGGATCCATCTCTAGCCAAATCACACCCCAGAGC...CTGCAGCTTGGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS TCA 90 bp CCGCCGCTCCTCCTCCTCCTCATCCTCATCCTCGCTTTCCCGGACTaGCCTCCGGTCGGGGAGGATAGGTACCCTCCAGCCCTTCACTTG +
Preference number: 5 (lower is better)
Translates to: PPLLLLLILILAFPD*PPVGEDRYPPALHL
Trigger: CAAGTGAAGGGCTGGAGGGTACCTATCCTCCCCGACCGGAGGTCAGTCCGGGAAAGCGAGGATGAGGATGAGGAGGAGGAGGAGCGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 90 bp GGTCACATCCAACTCAGGGCTGCCGTGGCGCCCGGCTGTCTCAGATaGAGCTCCGGGACCAGAGAGTGCAATTCGGGGACACTTTGCGGG +
Preference number: 5 (lower is better)
Translates to: GHIQLRAAVAPGCLR*SSGTRECNSGTLCG
Trigger: CCCGCAAAGTGTCCCCGAATTGCACTCTCTGGTCCCGGAGCTGCATCTGAGACAGCCGGGCGCCACGGCAGCCCTGAGTTGGATGTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 90 bp GTGAGGCAGGCTGGGAGGCAGGACTTCGCAGCTCTGCCTCAGGTCTaGAACCAGGAACCAGTGTCCAGAGGTCATGAGAGGGTCGGGGGC +
Preference number: 5 (lower is better)
Translates to: VRQAGRQDFAALPQV*NQEPVSRGHERVGG
Trigger: GCCCCCGACCCTCTCATGACCTCTGGACACTGGTTCCTGGTTGCAGACCTGAGGCAGAGCTGCGAAGTCCTGCCTCCCAGCCTGCCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577271.1
CDS CCA 90 bp CTGAAGGGCCCCAGAGAGACGTTGAGGACCGGCAGCTCCTTGGTCTaGAACACCACGAAGGGCTCGGAGCGCTGCAGAGAGCTGTTGGCG +
Preference number: 5 (lower is better)
Translates to: LKGPRETLRTGSSLV*NTTKGSERCRELLA
Trigger: CGCCAACAGCTCTCTGCAGCGCTCCGAGCCCTTCGTGGTGTTCCAGACCAAGGAGCTGCCGGTCCTCAACGTCTCTCTGGGGCCCTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 90 bp CCTGACCCCTCGGCCTCAGCCACTACCAGAGGGAAGGCCCGGTCCTaGGTCACAGTGGCCACATGCTCATCCAGGCTGCTCACTAGCAGT +
Preference number: 5 (lower is better)
Translates to: PDPSASATTRGKARS*VTVATCSSRLLTSS
Trigger: ACTGCTAGTGAGCAGCCTGGATGAGCATGTGGCCACTGTGACCCAGGACCGGGCCTTCCCTCTGGTAGTGGCTGAGGCCGAGGGGTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321639.7
ENST00000577271.1
ENST00000631683.2
CDS-3UTR CAA 90 bp CCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGATTGGGGGAAGCCACAGTaGCACGAAGCAGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: PLCRVSSQVLGGTRMPADWGKPQ*HEAAAA
Trigger: GGCGGCGGCTGCTTCGTGCAACTGTGGCTTCCCCCA...ATCTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCACGGGCGGCCAGATGTTaGTCCCCTCGCAAGGCTCGC +
Preference number: 5 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPARAARC*SPRKAR
Trigger: GCGAGCCTTGCGAGGGGACAAACATCTGGCCGCCCG...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp CCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGATCCCTGCCCAAAGCCCTaGGGGCAGAGGTGGGAGTCC +
Preference number: 5 (lower is better)
Translates to: PLCRVSSQVLGGTRMPADPCPKP*GQRWES
Trigger: GGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGG...ATCTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGCTCCCGGGTTCCGTCTaGTGGGGCATAGGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: DLSVESAPRSWEAPECQQLPGSV*WGIGGC
Trigger: GCAGCCACCTATGCCCCACAAGACGGAACCCGGGAG...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGAGGCGGCAGGAGCTCTaGACTTCCCGGGCATCCCGG +
Preference number: 5 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRRRQEL*TSRASR
Trigger: CCGGGATGCCCGGGAAGTCAAGAGCTCCTGCCGCCT...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631683.2
CDS GCA 90 bp CAGGATGGCTTGCACATCCCGCTGAATGACCGTCAGCTCAGTGACTaGCCGCTCCAGGTCAGGCAGGGCGCCGTGGCCACGGTAGTCAAT +
Preference number: 5 (lower is better)
Translates to: QDGLHIPLNDRQLSD*PLQVRQGAVATVVN
Trigger: ATTGACTACCGTGGCCACGGCGCCCTGCCTGACCTGGAGCGGGCAGTCACTGAGCTGACGGTCATTCAGCGGGATGTGCAAGCCATCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 90 bp ATAGAGGAGGATGCTGAGCACTTCCCCGGGCTTGAGGGGCCGGTCTaGCAGGCGGATCATCAGGTTGCTGTCCAGCCTGTGCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: IEEDAEHFPGLEGPV*QADHQVAVQPVLLQ
Trigger: CTGCAGGAGCACAGGCTGGACAGCAACCTGATGATCCGCCTGCCAGACCGGCCCCTCAAGCCCGGGGAAGTGCTCAGCATCCTCCTCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTTGGGGGAAGCCACAGTaGCACGAAGCAGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVWGKPQ*HEAAAA
Trigger: GGCGGCGGCTGCTTCGTGCAACTGTGGCTTCCCCCA...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCGGGCGGCCAGATGTTaGTCCCCTCGCAAGGCTCGC +
Preference number: 5 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEERAARC*SPRKAR
Trigger: GCGAGCCTTGCGAGGGGACAAACATCTGGCCGCCCG...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGGGCCCCAGAGAGACGTaGAGGACCGGCAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRGPRET*RTGSSL
Trigger: CAAGGAGCTGCCGGTCCTCAACGTCTCTCTGGGGCC...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGCATCCACGGTGGCTGTaGAGTGCTTTGCCCCAGTCA +
Preference number: 5 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLHPRWL*SALPQS
Trigger: TGACTGGGGCAAAGCACTCAACAGCCACCGTGGATG...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp CGAGGGAAGGCCCAGACACTGAGGCGGCCCGCTCCGCACGGAGCCAAGCTGCAGAGCACACTCTTGCGTTaGGTTTTCTGGCAGCTCTCA +
Preference number: 5 (lower is better)
Translates to: RGKAQTLRRPAPHGAKLQSTLLR*VFWQLS
Trigger: TGAGAGCTGCCAGAAAACCAAACGCAAGAGTGTGCT...CTGCAGCTTGGCTCCGTGCGGAGCGGGCCGCCTCAGTGTCTGGGCCTTCCCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGGTGAACTTGACCCGCTaGCGCTTGGAGGTGGGCGAG +
Preference number: 5 (lower is better)
Translates to: DLSVESAPRSWEAPECQQVNLTR*RLEVGE
Trigger: CTCGCCCACCTCCAAGCGCAAGCGGGTCAAGTTCAC...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCACTCCCGGGTTCCGTCTaGTGGGGCATAGGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPALPGSV*WGIGGC
Trigger: GCAGCCACCTATGCCCCACAAGACGGAACCCGGGAG...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS TCA 90 bp ATCTCTGTGTCCATGGCCAGGGGCAGGATGGCTTGCACATCCCGCTaGATGACCGTCAGCTCAGTGACTGCCCGCTCCAGGTCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: ISVSMARGRMACTSR*MTVSSVTARSRSGR
Trigger: CCTGCCTGACCTGGAGCGGGCAGTCACTGAGCTGACGGTCATTCAGCGGGATGTGCAAGCCATCCTGCCCCTGGCCATGGACACAGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 90 bp AAATCCCAGCACTGCTGGAAGAGGGGCCTGAAGGGTGAGGCAGGCTaGGAGGCAGGACTTCGCAGCTCTGCCTCAGGTCTGCAACCAGGA +
Preference number: 5 (lower is better)
Translates to: KSQHCWKRGLKGEAG*EAGLRSSASGLQPG
Trigger: TCCTGGTTGCAGACCTGAGGCAGAGCTGCGAAGTCCTGCCTCCCAGCCTGCCTCACCCTTCAGGCCCCTCTTCCAGCAGTGCTGGGATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577271.1
CDS-3UTR CAA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGACAGTCGACGACGACTaGGCCCCAGGCTGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEETVDDD*APGWAW
Trigger: CCAAGCCCAGCCTGGGGCCAAGTCGTCGTCGACTGT...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCACGCTGCAGAGAGCTGTaGGCGACCGCGGGTGACGGG +
Preference number: 5 (lower is better)
Translates to: TVPLTPRYFVHSKILGRARCREL*ATAGDG
Trigger: CCCGTCACCCGCGGTCGCCAACAGCTCTCTGCAGCG...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp CCTGGTGCCCTCTACTCCCCTCCCGGGTTCCGTCTTGTGGGGCATAGGTGGCTGCACATGATCCTCCGCTaGACTGACTGGCTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: PGALYSPPGFRLVGHRWLHMILR*TDWLVK
Trigger: CTTCACCAGCCAGTCAGTCAAGCGGAGGATCATGTG...CAGCCACCTATGCCCCACAAGACGGAACCCGGGAGGGGAGTAGAGGGCACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCACGCAGCGGCTGCCCGTaGCCCAGGAACACCCAGTGG +
Preference number: 5 (lower is better)
Translates to: TVPLTPRYFVHSKILGRARSGCP*PRNTQW
Trigger: CCACTGGGTGTTCCTGGGCAACGGGCAGCCGCTGCG...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGTCTTGGGGCAGGGGGTaGCTTAAGATGGGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKSWGRG*LKMGGG
Trigger: ACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGA...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 90 bp AGGGAGCGAGAAAGCCGGCTAATGCGCCCTGCCCCGAGCCCTTCCTaGCCAGGACGTCGACTCCAGCTTGATGACCATAAACGCTGTAAG +
Preference number: 5 (lower is better)
Translates to: RERESRLMRPAPSPS*PGRRLQLDDHKRCK
Trigger: CTTACAGCGTTTATGGTCATCAAGCTGGAGTCGACGTCCTGGGCAGGAAGGGCTCGGGGCAGGGCGCATTAGCCGGCTTTCTCGCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 90 bp GGAAGGCCCGGTCCTGGGTCACAGTGGCCACATGCTCATCCAGGCTaGTCACTAGCAGTCCATAGTCTCGTGGGCTGTAGAGGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: GRPGPGSQWPHAHPG*SLAVHSLVGCRGRV
Trigger: CACTCTCCCTCTACAGCCCACGAGACTATGGACTGCTAGTGAGCAGCCTGGATGAGCATGTGGCCACTGTGACCCAGGACCGGGCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321639.7
ENST00000577271.1
ENST00000631683.2
CDS GCA 90 bp CAAAGTGCACCCGCAGGCCCACAGGGGTCGTGGCGAGCACACTCTTaGGTTTGGTTTTCTGGCAGCTCTCAGCGATGGTTAGCTCTGCGC +
Preference number: 5 (lower is better)
Translates to: QSAPAGPQGSWRAHS*VWFSGSSQRWLALR
Trigger: GCGCAGAGCTAACCATCGCTGAGAGCTGCCAGAAAACCAAACGCAAGAGTGTGCTCGCCACGACCCCTGTGGGCCTGCGGGTGCACTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321639.7
ENST00000577271.1
ENST00000631683.2
CDS CCA 90 bp TCGGTGACCTCCACCAGCCAGTCCGGGCCTAACATGGTGACCACCTaGTCAGTGCCCTCGGATGATGTCGTGTGGAACTGGGTGAAGACC +
Preference number: 5 (lower is better)
Translates to: SVTSTSQSGPNMVTT*SVPSDDVVWNWVKT
Trigger: GGTCTTCACCCAGTTCCACACGACATCATCCGAGGGCACTGACCAGGTGGTCACCATGTTAGGCCCGGACTGGCTGGTGGAGGTCACCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCCGCTGCAGAGAGCTGTaGGCGACCGCGGGTGACGGG +
Preference number: 5 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPRCREL*ATAGDG
Trigger: CCCGTCACCCGCGGTCGCCAACAGCTCTCTGCAGCG...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAAGGACCGGCAGCTCCTaGGTCTGGAACACCACGAAG +
Preference number: 5 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPARTGSS*VWNTTK
Trigger: CTTCGTGGTGTTCCAGACCAAGGAGCTGCCGGTCCT...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp TTCCCCTTTAGGTCCCTGCCCAAAGCCCTTGGGGCAGAGGTGGGAGTCCTGAGAAGGCGGATCATCAGGTaGCTGTCCAGCCTGTGCTCC +
Preference number: 5 (lower is better)
Translates to: FPFRSLPKALGAEVGVLRRRIIR*LSSLCS
Trigger: GGAGCACAGGCTGGACAGCAACCTGATGATCCGCCT...TCTCAGGACTCCCACCTCTGCCCCAAGGGCTTTGGGCAGGGACCTAAAGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGCACTTCCCCGGGCTaGAGGGGCCGGTCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGSTSPG*RGRSGR
Trigger: CCTGCCAGACCGGCCCCTCAAGCCCGGGGAAGTGCT...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGCATCCACGGTGGCTGTaGAGTGCTTTGCCCCAGTCA +
Preference number: 5 (lower is better)
Translates to: DLSVESAPRSWEAPECQQHPRWL*SALPQS
Trigger: TGACTGGGGCAAAGCACTCAACAGCCACCGTGGATG...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGTCGATGGCAATGACCTaGACAGGGATGGCCACTGTC +
Preference number: 5 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKSMAMT*TGMATV
Trigger: GACAGTGGCCATCCCTGTCAAGGTCATTGCCATCGA...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCGGGTGCAGCCACGGCTaGCACTCTGCCGCCGCTCCT +
Preference number: 5 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGGCSHG*HSAAAP
Trigger: AGGAGCGGCGGCAGAGTGCAAGCCGTGGCTGCACCC...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCATTGACCCGCTTGCGCTaGGAGGTGGGCGAGCTGGCG +
Preference number: 5 (lower is better)
Translates to: TVPLTPRYFVHSKILGRALTRLR*EVGELA
Trigger: CGCCAGCTCGCCCACCTCCAAGCGCAAGCGGGTCAA...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 90 bp TCTCCCGGCCTCACGGCCCAGCTCGAATCCGAACTCACTCGAGGGTaGCGACTTCCAACGCAATCCCCAGTTTCCTCGGTTTCGGTAGTA +
Preference number: 5 (lower is better)
Translates to: SPGLTAQLESELTRG*RLPTQSPVSSVSVV
Trigger: TACTACCGAAACCGAGGAAACTGGGGATTGCGTTGGAAGTCGGCACCCTCGAGTGAGTTCGGATTCGAGCTGGGCCGTGAGGCCGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCTCCCTCCGAGTCAGTTaGGGCGAGCGGATCGCCGCG +
Preference number: 5 (lower is better)
Translates to: MPADATTVPLTPRYFVHSSLRVS*GERIAA
Trigger: CGCGGCGATCCGCTCGCCCAAACTGACTCGGAGGGA...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTTGGCTGTTGAGTGCTTaGCCCCAGTCAGCAGCTCCG +
Preference number: 5 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVWLLSA*PQSAAP
Trigger: CGGAGCTGCTGACTGGGGCAAAGCACTCAACAGCCA...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGTGAAGGTGGTGAACTaGACCCGCTTGCGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPAVKVVN*TRLRLE
Trigger: CTCCAAGCGCAAGCGGGTCAAGTTCACCACCTTCAC...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGAACAGAGGCTGGGGTaGCTTTCCTCCTTACGAGCC +
Preference number: 5 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPAEQRLG*LSSLRA
Trigger: GGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTC...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGGGCTCCCTTCTGCATTaGCCCACCCTGAAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEEGSLLH*PTLKSL
Trigger: GAGGGACTTCAGGGTGGGCAAATGCAGAAGGGAGCC...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 90 bp CTAGCAGTCCATAGTCTCGTGGGCTGTAGAGGGAGAGTGGGGCTGTaGTGCCATCACTGTAGGAGAGCCAGAGGCTCAGTAGGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: LAVHSLVGCRGRVGL*CHHCRRARGSVGLP
Trigger: AGGAAGCCCTACTGAGCCTCTGGCTCTCCTACAGTGATGGCACCACAGCCCCACTCTCCCTCTACAGCCCACGAGACTATGGACTGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321639.7
ENST00000577271.1
ENST00000631683.2
CDS-3UTR CAA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCGGCCCCAGGCTGGGCTaGGTCACATCCAACTCAGGG +
Preference number: 5 (lower is better)
Translates to: MPADATTVPLTPRYFVHSGPRLG*VTSNSG
Trigger: CCCTGAGTTGGATGTGACCAAGCCCAGCCTGGGGCC...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTAGGGTCACACCCTTCTaGGCCTTCACCCTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVRVTPF*AFTLSV
Trigger: CACACTCAGGGTGAAGGCCAAGAAGGGTGTGACCCT...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCATCGATGGCAATGACCTaGACAGGGATGGCCACTGTC +
Preference number: 5 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPASMAMT*TGMATV
Trigger: GACAGTGGCCATCCCTGTCAAGGTCATTGCCATCGA...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGGTGGCGAGCACACTCTaGCGTTTGGTTTTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: RLGLLSSLRATGGRALHLVASTL*RLVFWQ
Trigger: CTGCCAGAAAACCAAACGCAAGAGTGTGCTCGCCAC...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTGAACAGAGGCTGGGGTaGCTTTCCTCCTTACGAGCC +
Preference number: 5 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVEQRLG*LSSLRA
Trigger: GGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTC...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGTCTTGGGGCAGGGGGTaGCTTAAGATGGGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEESWGRG*LKMGGG
Trigger: ACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGA...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGGCTCTGGGGTGTGATTaGGCTAGAGATGGATCCAGG +
Preference number: 5 (lower is better)
Translates to: RLGLLSSLRATGGRALHLALGCD*ARDGSR
Trigger: CCTGGATCCATCTCTAGCCAAATCACACCCCAGAGC...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGTGGCCACTCCGTGACTaGGTACCTAAAAGGGTCACA +
Preference number: 5 (lower is better)
Translates to: RLGLLSSLRATGGRALHLWPLRD*VPKRVT
Trigger: TGTGACCCTTTTAGGTACCAAGTCACGGAGTGGCCA...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTCACATGATCCTCCGCTaGACTGACTGGCTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVHMILR*TDWLVK
Trigger: CTTCACCAGCCAGTCAGTCAAGCGGAGGATCATGTG...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp CCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGATAGTAGGGCTTCCTGCTaGAGGAAGCTCAAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: PLCRVSSQVLGGTRMPADSRASC*RKLKVC
Trigger: ACAGACCTTGAGCTTCCTCAAGCAGGAAGCCCTACT...ATCTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCGTGAACTTGACCCGCTaGCGCTTGGAGGTGGGCGAG +
Preference number: 5 (lower is better)
Translates to: MPADATTVPLTPRYFVHSVNLTR*RLEVGE
Trigger: CTCGCCCACCTCCAAGCGCAAGCGGGTCAAGTTCAC...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCTCCACAGCAAGATCCTaGGCAGGGCAGGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: MPADATTVPLTPRYFVHSSTARS*AGQAAA
Trigger: GGCAGCTGCCTGCCCTGCCAAGGATCTTGCTGTGGA...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCAGGAACCTGCACAAACCTaGAACTTTTCTGGGGTTCAG +
Preference number: 5 (lower is better)
Translates to: DLSVESAPRSWEAPECQQEPAQT*NFSGVQ
Trigger: CTGAACCCCAGAAAAGTTCAAGGTTTGTGCAGGTTC...CTGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGACCGGCAGCTCCTaGGTCTGGAACACCACGAAG +
Preference number: 5 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGRTGSS*VWNTTK
Trigger: CTTCGTGGTGTTCCAGACCAAGGAGCTGCCGGTCCT...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAGGCGGATCATCAGGTaGCTGTCCAGCCTGTGCTCC +
Preference number: 5 (lower is better)
Translates to: MPADATTVPLTPRYFVHSRRIIR*LSSLCS
Trigger: GGAGCACAGGCTGGACAGCAACCTGATGATCCGCCT...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GGACCTCCTTGCCTCACTCTTGGGGCAGGGGGTTGCTTAAGATGGGAGGAGGTTTGGCCACTCCGTGACTaGGTACCTAAAAGGGTCACA +
Preference number: 5 (lower is better)
Translates to: GPPCLTLGAGGCLRWEEVWPLRD*VPKRVT
Trigger: TGTGACCCTTTTAGGTACCAAGTCACGGAGTGGCCA...AACCTCCTCCCATCTTAAGCAACCCCCTGCCCCAAGAGTGAGGCAAGGAGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCTGGCTGTTGAGTGCTTaGCCCCAGTCAGCAGCTCCG +
Preference number: 5 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGWLLSA*PQSAAP
Trigger: CGGAGCTGCTGACTGGGGCAAAGCACTCAACAGCCA...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCCAGGGGCAGGATGGCTaGCACATCCCGCTGAATGAC +
Preference number: 5 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPQGQDG*HIPLND
Trigger: GTCATTCAGCGGGATGTGCAAGCCATCCTGCCCCTG...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGAGCACACTCTTGCGTTaGGTTTTCTGGCAGCTCTCA +
Preference number: 5 (lower is better)
Translates to: RLGLLSSLRATGGRALHLSTLLR*VFWQLS
Trigger: TGAGAGCTGCCAGAAAACCAAACGCAAGAGTGTGCT...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp ACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGGGCAGTAGTAGTGTTGACCTaGCTGTGGGGGACGGGGAAG +
Preference number: 5 (lower is better)
Translates to: TVPLTPRYFVHSKILGRAVVVLT*LWGTGK
Trigger: CTTCCCCGTCCCCCACAGCAAGGTCAACACTACTAC...TGCCCTGCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCAGGGTCACACCCTTCTaGGCCTTCACCCTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPRVTPF*AFTLSV
Trigger: CACACTCAGGGTGAAGGCCAAGAAGGGTGTGACCCT...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGTTGATGATGTCTTCATaGTCAGACTCGCATTCCACT +
Preference number: 5 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKLMMSS*SDSHST
Trigger: AGTGGAATGCGAGTCTGACAATGAAGACATCATCAA...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCGTGAAGGTGGTGAACTaGACCCGCTTGCGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: MPADATTVPLTPRYFVHSVKVVN*TRLRLE
Trigger: CTCCAAGCGCAAGCGGGTCAAGTTCACCACCTTCAC...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCAGGAAGGTGCCTGGCTaGGCACCAGACCTCTCTGTA +
Preference number: 5 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPRKVPG*APDLSV
Trigger: TACAGAGAGGTCTGGTGCCAAGCCAGGCACCTTCCT...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCGTAGTAGTGTTGACCTaGCTGTGGGGGACGGGGAAG +
Preference number: 5 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPVVVLT*LWGTGK
Trigger: CTTCCCCGTCCCCCACAGCAAGGTCAACACTACTAC...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGCTGCTGGATACCTaGATGATGTCTTCATTGTCA +
Preference number: 5 (lower is better)
Translates to: RLGLLSSLRATGGRALHLQLLDT*MMSSLS
Trigger: TGACAATGAAGACATCATCAAGGTATCCAGCAGCTG...CAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCGTGGCGAGCACACTCTaGCGTTTGGTTTTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPVASTL*RLVFWQ
Trigger: CTGCCAGAAAACCAAACGCAAGAGTGTGCTCGCCAC...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp TGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGCCCTCCACCTGCAGGACAAAAACGATGCAGTaGATGAGGAAGACGAGGATG +
Preference number: 5 (lower is better)
Translates to: WGCFPPYEPLEEEPSTCRTKTMQ*MRKTRM
Trigger: CATCCTCGTCTTCCTCATCAACTGCATCGTTTTTGT...CCTGCAGGTGGAGGGCTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGAGCCCTCCACCTGCAGGGGGCAGAAGAGGGTAATGGCGTGAGGCGAGGGAAGTCCCTGAATATTAGTTaGAGGAAAGTCTTTGTGCAG +
Preference number: 5 (lower is better)
Translates to: RALHLQGAEEGNGVRRGKSLNIS*RKVFVQ
Trigger: CTGCACAAAGACTTTCCTCAAACTAATATTCAGGGA...CTTCCCTCGCCTCACGCCATTACCCTCTTCTGCCCCCTGCAGGTGGAGGGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS TCA 90 bp GCCGTGGCCACGGTAGTCAATGTGCCACATGATCCTCCGCTTGACTaGCTGGCTGGTGAAGTTCTCCATTTCAAAGTCCAGCTGCAAGAT +
Preference number: 5 (lower is better)
Translates to: AVATVVNVPHDPPLD*LAGEVLHFKVQLQD
Trigger: ATCTTGCAGCTGGACTTTGAAATGGAGAACTTCACCAGCCAGTCAGTCAAGCGGAGGATCATGTGGCACATTGACTACCGTGGCCACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGACCTCTCTGTAGAGTCAGCTCCCAGGTCCTGGGAGGCACCCGAATGCCAGCATTGATGATGTCTTCATaGTCAGACTCGCATTCCACT +
Preference number: 5 (lower is better)
Translates to: RPLCRVSSQVLGGTRMPALMMSS*SDSHST
Trigger: AGTGGAATGCGAGTCTGACAATGAAGACATCATCAA...TGCTGGCATTCGGGTGCCTCCCAGGACCTGGGAGCTGACTCTACAGAGAGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCAGTAGGGCTTCCTGCTaGAGGAAGCTCAAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGSRASC*RKLKVC
Trigger: ACAGACCTTGAGCTTCCTCAAGCAGGAAGCCCTACT...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp ATGCCAGCAGATGCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCGACGTCGACTCCAGCTaGATGACCATAAACGCTGTA +
Preference number: 5 (lower is better)
Translates to: MPADATTVPLTPRYFVHSDVDSS*MTINAV
Trigger: TACAGCGTTTATGGTCATCAAGCTGGAGTCGACGTC...GCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGCATCTGCTGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp AGTTTGAGGAAAGTCTTTGTGCAGCCTGTGACACAAGACCCCCACAGAACCCCCGAACCTGCACAAACCTaGAACTTTTCTGGGGTTCAG +
Preference number: 5 (lower is better)
Translates to: SLRKVFVQPVTQDPHRTPEPAQT*NFSGVQ
Trigger: CTGAACCCCAGAAAAGTTCAAGGTTTGTGCAGGTTC...GGGGGTTCTGTGGGGGTCTTGTGTCACAGGCTGCACAAAGACTTTCCTCAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GGGCAGAACAGAGGCTGGGGTTGCTTTCCTCCTTACGAGCCACTGGAGGAAGAGTCCCTGAATATTAGTTaGAGGAAAGTCTTTGTGCAG +
Preference number: 5 (lower is better)
Translates to: GQNRGWGCFPPYEPLEEESLNIS*RKVFVQ
Trigger: CTGCACAAAGACTTTCCTCAAACTAATATTCAGGGA...CTCTTCCTCCAGTGGCTCGTAAGGAGGAAAGCAACCCCAGCCTCTGTTCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS-3UTR CAA 90 bp GCTACAACTGTCCCCCTAACCCCCAGATATTTCGTCCACAGCAAGATCCTTGGCCAGCTGCTGGATACCTaGATGATGTCTTCATTGTCA +
Preference number: 5 (lower is better)
Translates to: ATTVPLTPRYFVHSKILGQLLDT*MMSSLS
Trigger: TGACAATGAAGACATCATCAAGGTATCCAGCAGCTG...GCCAAGGATCTTGCTGTGGACGAAATATCTGGGGGTTAGGGGGACAGTTGTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp GCTCAGCGCCTCCTGCCCAGGCAGCCGCTCGGCGGCTaGGGCAAGGGTGGCGCGGCCAGAACGGGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: AQRLLPRQPLGG*GKGGAARTGCP
Trigger: GGGGCAGCCCGTTCTGGCCGCGCCACCCTTGCCCCAGCCGCCGAGCGGCTGCCTGGGCAGGAGGCGCTGAGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp CGGGCTGAGCCGCCCGAGGAGCCGTCGCCCCTGCCGTaGACCTGGCTCTGGACGCTGGTCTGCGAGCTGCCG +
Preference number: 6 (lower is better)
Translates to: RAEPPEEPSPLP*TWLWTLVCELP
Trigger: CGGCAGCTCGCAGACCAGCGTCCAGAGCCAGGTGCACGGCAGGGGCGACGGCTCCTCGGGCGGCTCAGCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp GAAGGCCAGCCGCGTGTGCGACAGGCGGTAGCTGACTaGCAGCACCGGGCTGGCCTGCGGCCCCGGCGGGCT +
Preference number: 6 (lower is better)
Translates to: EGQPRVRQAVAD*QHRAGLRPRRA
Trigger: AGCCCGCCGGGGCCGCAGGCCAGCCCGGTGCTGCCAGTCAGCTACCGCCTGTCGCACACGCGGCTGGCCTTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp CGCTTGGAGGTGGGCGAGCTGGCGGGGTCCTCGGCTTaGTCTCGGGCTGAGCCGCCCGAGGAGCCGTCGCCC +
Preference number: 6 (lower is better)
Translates to: RLEVGELAGSSA*SRAEPPEEPSP
Trigger: GGGCGACGGCTCCTCGGGCGGCTCAGCCCGAGACCAAGCCGAGGACCCCGCCAGCTCGCCCACCTCCAAGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS TCA 72 bp GGAAGAAGGCCAGCCGCGTGTGCGACAGGCGGTAGCTaGCTGGCAGCACCGGGCTGGCCTGCGGCCCCGGCG +
Preference number: 6 (lower is better)
Translates to: GRRPAACATGGS*LAAPGWPAAPA
Trigger: CGCCGGGGCCGCAGGCCAGCCCGGTGCTGCCAGTCAGCTACCGCCTGTCGCACACGCGGCTGGCCTTCTTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp GGTCTCGGGCTGAGCCGCCCGAGGAGCCGTCGCCCCTaGCGTGCACCTGGCTCTGGACGCTGGTCTGCGAGC +
Preference number: 6 (lower is better)
Translates to: GLGLSRPRSRRP*RAPGSGRWSAS
Trigger: GCTCGCAGACCAGCGTCCAGAGCCAGGTGCACGGCAGGGGCGACGGCTCCTCGGGCGGCTCAGCCCGAGACC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp TGCCGGGCATCGGCTCCCGCTCCCTCCGAGTCAGTTTaGGCGAGCGGATCGCCGCGCCAGTCCGGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: CRASAPAPSESV*ASGSPRQSGLR
Trigger: CCGCAGCCCGGACTGGCGCGGCGATCCGCTCGCCCAAACTGACTCGGAGGGAGCGGGAGCCGATGCCCGGCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 72 bp CTGCCGGGCATCGGCTCCCGCTCCCTCCGAGTCAGTTaGGGCGAGCGGATCGCCGCGCCAGTCCGGGCTGCG +
Preference number: 6 (lower is better)
Translates to: LPGIGSRSLRVS*GERIAAPVRAA
Trigger: CGCAGCCCGGACTGGCGCGGCGATCCGCTCGCCCAAACTGACTCGGAGGGAGCGGGAGCCGATGCCCGGCAG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp CCCTGTCCCCGGACGCCCGTTCGCCCGCTGTCTCGATaGTGCCGGGCATCGGCTCCCGCTCCCTCCGAGTCA +
Preference number: 6 (lower is better)
Translates to: PCPRTPVRPLSR*CRASAPAPSES
Trigger: TGACTCGGAGGGAGCGGGAGCCGATGCCCGGCAGCATCGAGACAGCGGGCGAACGGGCGTCCGGGGACAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp CCGGTCGCCACCACCCTAGGCGACGCCCAGACCGGATaGCCGAGGCGGGCGGCCAGATGTTTGTCCCCTCGC +
Preference number: 6 (lower is better)
Translates to: PVATTLGDAQTG*PRRAARCLSPR
Trigger: GCGAGGGGACAAACATCTGGCCGCCCGCCTCGGGCATCCGGTCTGGGCGTCGCCTAGGGTGGTGGCGACCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp CGCAGCAGGGGGTGTTCCCGGGCATCCCGGAAGGCATaGAGGCGGACACAGGGCAGCCGCTCGGTGACGCCG +
Preference number: 6 (lower is better)
Translates to: RSRGCSRASRKA*RRTQGSRSVTP
Trigger: CGGCGTCACCGAGCGGCTGCCCTGTGTCCGCCTGCATGCCTTCCGGGATGCCCGGGAACACCCCCTGCTGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321639.7
CDS CCA 72 bp ACACCACGAAGGGCTCGGAGCGCTGCAGAGAGCTGTTaGCGACCGCGGGTGACGGGGGCCGCGCCTCCCGCA +
Preference number: 6 (lower is better)
Translates to: TPRRARSAAESC*RPRVTGAAPPA
Trigger: TGCGGGAGGCGCGGCCCCCGTCACCCGCGGTCGCCAACAGCTCTCTGCAGCGCTCCGAGCCCTTCGTGGTGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp GGGCCTCGTCCTCGCCCCCGCCGGGCCCTGGTTGGCTaGGGCCCGGGTAGTCATAAGTGGGGTCCTCCTCGT +
Preference number: 6 (lower is better)
Translates to: GPRPRPRRALVG*GPGSHKWGPPR
Trigger: ACGAGGAGGACCCCACTTATGACTACCCGGGCCCCAGCCAACCAGGGCCCGGCGGGGGCGAGGACGAGGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp GCGGCAGGAAGTCTTCTGTGGGTGGCACGACGGGGCTaGCGGTGCCCGGGCCTGGAGCCTCCGGTGCGGGTA +
Preference number: 6 (lower is better)
Translates to: AAGSLLWVARRG*RCPGLEPPVRV
Trigger: TACCCGCACCGGAGGCTCCAGGCCCGGGCACCGCCAGCCCCGTCGTGCCACCCACAGAAGACTTCCTGCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp GAAGCCGGTGGGCAGCGGCAGGAAGTCTTCTGTGGGTaGCACGACGGGGCTGGCGGTGCCCGGGCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: EAGGQRQEVFCG*HDGAGGARAWS
Trigger: GCTCCAGGCCCGGGCACCGCCAGCCCCGTCGTGCCACCCACAGAAGACTTCCTGCCGCTGCCCACCGGCTTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp CCCGAGGAGCCGTCGCCCCTGCCGTGCACCTGGCTCTaGACGCTGGTCTGCGAGCTGCCGCTGCTGTGGTGG +
Preference number: 6 (lower is better)
Translates to: PEEPSPLPCTWL*TLVCELPLLWW
Trigger: CCACCACAGCAGCGGCAGCTCGCAGACCAGCGTCCAGAGCCAGGTGCACGGCAGGGGCGACGGCTCCTCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 90 bp GTCTCGATGCTGCCGGGCATCGGCTCCCGCTCCCTCCGAGTCAGTTaGGGCGAGCGGATCGCCGCGCCAGTCCGGGCTGCGGGCGGTGAG +
Preference number: 6 (lower is better)
Translates to: VSMLPGIGSRSLRVS*GERIAAPVRAAGGE
Trigger: CTCACCGCCCGCAGCCCGGACTGGCGCGGCGATCCGCTCGCCCAAACTGACTCGGAGGGAGCGGGAGCCGATGCCCGGCAGCATCGAGAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp CCGCTAAGGTCTCGCTGTCTCGGCAGAGAGGCGCGCTaGCCCGCCTCGCTCCTCGCCTTCCCTGGGGGAACC +
Preference number: 6 (lower is better)
Translates to: PLRSRCLGREAR*PASLLAFPGGT
Trigger: GGTTCCCCCAGGGAAGGCGAGGAGCGAGGCGGGGCAGCGCGCCTCTCTGCCGAGACAGCGAGACCTTAGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp GTCAGGCGCTCGGGGATGTCCAGGGTGCTGGACGGCTaGAGGAGCTCCCGCGCCACCACCTGGCTGGTGCTG +
Preference number: 6 (lower is better)
Translates to: VRRSGMSRVLDG*RSSRATTWLVL
Trigger: CAGCACCAGCCAGGTGGTGGCGCGGGAGCTCCTGCAGCCGTCCAGCACCCTGGACATCCCCGAGCGCCTGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp GCACCTGGCTCTGGACGCTGGTCTGCGAGCTGCCGCTaGTGTGGTGGTCGCCGTGGCAGAAGGCGGGCACGG +
Preference number: 6 (lower is better)
Translates to: APGSGRWSASCR*CGGRRGRRRAR
Trigger: CCGTGCCCGCCTTCTGCCACGGCGACCACCACAGCAGCGGCAGCTCGCAGACCAGCGTCCAGAGCCAGGTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp AGCCGTCGCCCCTGCCGTGCACCTGGCTCTGGACGCTaGTCTGCGAGCTGCCGCTGCTGTGGTGGTCGCCGT +
Preference number: 6 (lower is better)
Translates to: SRRPCRAPGSGR*SASCRCCGGRR
Trigger: ACGGCGACCACCACAGCAGCGGCAGCTCGCAGACCAGCGTCCAGAGCCAGGTGCACGGCAGGGGCGACGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 72 bp GCCCAGACCGGATGCCCGAGGCGGGCGGCCAGATGTTaGTCCCCTCGCAAGGCTCGCTCCTCCGCTCCAGCG +
Preference number: 6 (lower is better)
Translates to: AQTGCPRRAARC*SPRKARSSAPA
Trigger: CGCTGGAGCGGAGGAGCGAGCCTTGCGAGGGGACAAACATCTGGCCGCCCGCCTCGGGCATCCGGTCTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 90 bp CTGTGGTGGTCGCCGTGGCAGAAGGCGGGCACGGTTTCCAGCGGGTaGCCTGCTGGCGGCGACAGCTCTCCTTGCACCCGCAGCGGCTGC +
Preference number: 6 (lower is better)
Translates to: LWWSPWQKAGTVSSG*PAGGDSSPCTRSGC
Trigger: GCAGCCGCTGCGGGTGCAAGGAGAGCTGTCGCCGCCAGCAGGCAACCCGCTGGAAACCGTGCCCGCCTTCTGCCACGGCGACCACCACAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS TCA 72 bp CCACGGGCTGCGAGGCGGGCACGTGCGAGCGGACGATaGAGGCCCGCACCTTCCAGTTCACCGTCAGGCGCT +
Preference number: 6 (lower is better)
Translates to: PRAARRARASGR*RPAPSSSPSGA
Trigger: AGCGCCTGACGGTGAACTGGAAGGTGCGGGCCTTCATCGTCCGCTCGCACGTGCCCGCCTCGCAGCCCGTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS TCA 72 bp GGAAGGCATGCAGGCGGACACAGGGCAGCCGCTCGGTaGCGCCGAAGTCGTCCCAGTCCCGGCCGGCTACGT +
Preference number: 6 (lower is better)
Translates to: GRHAGGHRAAAR*RRSRPSPGRLR
Trigger: ACGTAGCCGGCCGGGACTGGGACGACTTCGGCGTCACCGAGCGGCTGCCCTGTGTCCGCCTGCATGCCTTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp TGTCCCCGGACGCCCGTTCGCCCGCTGTCTCGATGCTaGCGGGCATCGGCTCCCGCTCCCTCCGAGTCAGTT +
Preference number: 6 (lower is better)
Translates to: CPRTPVRPLSRC*RASAPAPSESV
Trigger: AACTGACTCGGAGGGAGCGGGAGCCGATGCCCGGCAGCATCGAGACAGCGGGCGAACGGGCGTCCGGGGACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp TCCAGCGGGTTGCCTGCTGGCGGCGACAGCTCTCCTTaGACCCGCAGCGGCTGCCCGTTGCCCAGGAACACC +
Preference number: 6 (lower is better)
Translates to: SSGLPAGGDSSP*TRSGCPLPRNT
Trigger: GGTGTTCCTGGGCAACGGGCAGCCGCTGCGGGTGCAAGGAGAGCTGTCGCCGCCAGCAGGCAACCCGCTGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp GTGGCAGAAGGCGGGCACGGTTTCCAGCGGGTTGCCTaGTGGCGGCGACAGCTCTCCTTGCACCCGCAGCGG +
Preference number: 6 (lower is better)
Translates to: VAEGGHGFQRVA*WRRQLSLHPQR
Trigger: CCGCTGCGGGTGCAAGGAGAGCTGTCGCCGCCAGCAGGCAACCCGCTGGAAACCGTGCCCGCCTTCTGCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp CGCCGTGGCAGAAGGCGGGCACGGTTTCCAGCGGGTTaGCTGCTGGCGGCGACAGCTCTCCTTGCACCCGCA +
Preference number: 6 (lower is better)
Translates to: RRGRRRARFPAG*LLAATALLAPA
Trigger: TGCGGGTGCAAGGAGAGCTGTCGCCGCCAGCAGGCAACCCGCTGGAAACCGTGCCCGCCTTCTGCCACGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp TGCCGTGCACCTGGCTCTGGACGCTGGTCTGCGAGCTaGCGCTGCTGTGGTGGTCGCCGTGGCAGAAGGCGG +
Preference number: 6 (lower is better)
Translates to: CRAPGSGRWSAS*RCCGGRRGRRR
Trigger: CCGCCTTCTGCCACGGCGACCACCACAGCAGCGGCAGCTCGCAGACCAGCGTCCAGAGCCAGGTGCACGGCA
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp GCAGAAGGCGGGCACGGTTTCCAGCGGGTTGCCTGCTaGCGGCGACAGCTCTCCTTGCACCCGCAGCGGCTG +
Preference number: 6 (lower is better)
Translates to: AEGGHGFQRVAC*RRQLSLHPQRL
Trigger: CAGCCGCTGCGGGTGCAAGGAGAGCTGTCGCCGCCAGCAGGCAACCCGCTGGAAACCGTGCCCGCCTTCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 72 bp TCGCCGTGGCAGAAGGCGGGCACGGTTTCCAGCGGGTaGCCTGCTGGCGGCGACAGCTCTCCTTGCACCCGC +
Preference number: 6 (lower is better)
Translates to: SPWQKAGTVSSG*PAGGDSSPCTR
Trigger: GCGGGTGCAAGGAGAGCTGTCGCCGCCAGCAGGCAACCCGCTGGAAACCGTGCCCGCCTTCTGCCACGGCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 72 bp CAAGTGGCCAGGCCCCCGCTGAGGCGGCAGGAGCTCTaGACTTCCCGGGCATCCCGGAAGGCATGCAGGCGG +
Preference number: 6 (lower is better)
Translates to: QVARPPLRRQEL*TSRASRKACRR
Trigger: CCGCCTGCATGCCTTCCGGGATGCCCGGGAAGTCAAGAGCTCCTGCCGCCTCAGCGGGGGCCTGGCCACTTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631683.2
CDS CAA 90 bp CTAGGCGACGCCCAGACCGGATGCCCGAGGCGGGCGGCCAGATGTTaGTCCCCTCGCAAGGCTCGCTCCTCCGCTCCAGCGCGCTTTCTC +
Preference number: 6 (lower is better)
Translates to: LGDAQTGCPRRAARC*SPRKARSSAPARFL
Trigger: GAGAAAGCGCGCTGGAGCGGAGGAGCGAGCCTTGCGAGGGGACAAACATCTGGCCGCCCGCCTCGGGCATCCGGTCTGGGCGTCGCCTAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 90 bp GGGCACGGTTTCCAGCGGGTTGCCTGCTGGCGGCGACAGCTCTCCTaGCACCCGCAGCGGCTGCCCGTTGCCCAGGAACACCCAGTGGTG +
Preference number: 6 (lower is better)
Translates to: GHGFQRVACWRRQLS*HPQRLPVAQEHPVV
Trigger: CACCACTGGGTGTTCCTGGGCAACGGGCAGCCGCTGCGGGTGCAAGGAGAGCTGTCGCCGCCAGCAGGCAACCCGCTGGAAACCGTGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 90 bp CGCACCAGACAAGTGGCCAGGCCCCCGCTGAGGCGGCAGGAGCTCTaGACTTCCCGGGCATCCCGGAAGGCATGCAGGCGGACACAGGGC +
Preference number: 6 (lower is better)
Translates to: RTRQVARPPLRRQEL*TSRASRKACRRTQG
Trigger: GCCCTGTGTCCGCCTGCATGCCTTCCGGGATGCCCGGGAAGTCAAGAGCTCCTGCCGCCTCAGCGGGGGCCTGGCCACTTGTCTGGTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631683.2
CDS TCA 72 bp CCTCCTCGGCGCTCGCGCCGGCTGCTCCGCCGTAAATaGCTCGAGAGAGACACACACACTCGCGCTCGCCCG +
Preference number: 6 (lower is better)
Translates to: PPRRSRRLLRRK*LERDTHTRARP
Trigger: CGGGCGAGCGCGAGTGTGTGTGTCTCTCTCGAGTCATTTACGGCGGAGCAGCCGGCGCGAGCGCCGAGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321639.7
CDS GCA 72 bp TCCAGTTCACCGTCAGGCGCTCGGGGATGTCCAGGGTaGTGGACGGCTGCAGGAGCTCCCGCGCCACCACCT +
Preference number: 6 (lower is better)
Translates to: SSSPSGARGCPG*WTAAGAPAPPP
Trigger: AGGTGGTGGCGCGGGAGCTCCTGCAGCCGTCCAGCACCCTGGACATCCCCGAGCGCCTGACGGTGAACTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp CAGGAGCTCTTGACTTCCCGGGCATCCCGGAAGGCATaGAGGCGGACACAGGGCAGCCGCTCGGTGACGCCG +
Preference number: 6 (lower is better)
Translates to: QELLTSRASRKA*RRTQGSRSVTP
Trigger: CGGCGTCACCGAGCGGCTGCCCTGTGTCCGCCTGCATGCCTTCCGGGATGCCCGGGAAGTCAAGAGCTCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631683.2
CDS CCA 72 bp CTGGTCTGCGAGCTGCCGCTGCTGTGGTGGTCGCCGTaGCAGAAGGCGGGCACGGTTTCCAGCGGGTTGCCT +
Preference number: 6 (lower is better)
Translates to: LVCELPLLWWSP*QKAGTVSSGLP
Trigger: AGGCAACCCGCTGGAAACCGTGCCCGCCTTCTGCCACGGCGACCACCACAGCAGCGGCAGCTCGCAGACCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp CTCTGGACGCTGGTCTGCGAGCTGCCGCTGCTGTGGTaGTCGCCGTGGCAGAAGGCGGGCACGGTTTCCAGC +
Preference number: 6 (lower is better)
Translates to: LWTLVCELPLLW*SPWQKAGTVSS
Trigger: GCTGGAAACCGTGCCCGCCTTCTGCCACGGCGACCACCACAGCAGCGGCAGCTCGCAGACCAGCGTCCAGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 72 bp TTCCAGCGGGTTGCCTGCTGGCGGCGACAGCTCTCCTaGCACCCGCAGCGGCTGCCCGTTGCCCAGGAACAC +
Preference number: 6 (lower is better)
Translates to: FQRVACWRRQLS*HPQRLPVAQEH
Trigger: GTGTTCCTGGGCAACGGGCAGCCGCTGCGGGTGCAAGGAGAGCTGTCGCCGCCAGCAGGCAACCCGCTGGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp TCCTTGGTCTGGAACACCACGAAGGGCTCGGAGCGCTaGAGAGAGCTGTTGGCGACCGCGGGTGACGGGGGC +
Preference number: 6 (lower is better)
Translates to: SLVWNTTKGSER*RELLATAGDGG
Trigger: GCCCCCGTCACCCGCGGTCGCCAACAGCTCTCTGCAGCGCTCCGAGCCCTTCGTGGTGTTCCAGACCAAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp AGGGTGGCGCGGCCAGAACGGGCTGCCCCATGTAGATaGGGCTTGGAGAAGCGAGGGAGCGAGAAAGCCGGC +
Preference number: 6 (lower is better)
Translates to: RVARPERAAPCR*GLEKRGSEKAG
Trigger: GCCGGCTTTCTCGCTCCCTCGCTTCTCCAAGCCCCATCTACATGGGGCAGCCCGTTCTGGCCGCGCCACCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp GCAACAGTCGACGACGACTTGGCCCCAGGCTGGGCTTaGTCACATCCAACTCAGGGCTGCCGTGGCGCCCGG +
Preference number: 6 (lower is better)
Translates to: ATVDDDLAPGWA*SHPTQGCRGAR
Trigger: CCGGGCGCCACGGCAGCCCTGAGTTGGATGTGACCAAGCCCAGCCTGGGGCCAAGTCGTCGTCGACTGTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp CGGGCCCTGGTTGGCTGGGGCCCGGGTAGTCATAAGTaGGGTCCTCCTCGTCCCTCCCAAAGTGCACCCGCA +
Preference number: 6 (lower is better)
Translates to: RALVGWGPGSHK*GPPRPSQSAPA
Trigger: TGCGGGTGCACTTTGGGAGGGACGAGGAGGACCCCACTTATGACTACCCGGGCCCCAGCCAACCAGGGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321639.7
ENST00000577271.1
ENST00000631683.2
CDS GCA 72 bp AGAAGCGAGGGAGCGAGAAAGCCGGCTAATGCGCCCTaGCCCGAGCCCTTCCTGCCCAGGACGTCGACTCCA +
Preference number: 6 (lower is better)
Translates to: RSEGARKPANAP*PEPFLPRTSTP
Trigger: TGGAGTCGACGTCCTGGGCAGGAAGGGCTCGGGGCAGGGCGCATTAGCCGGCTTTCTCGCTCCCTCGCTTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp TTGCACATCCCGCTGAATGACCGTCAGCTCAGTGACTaGCCGCTCCAGGTCAGGCAGGGCGCCGTGGCCACG +
Preference number: 6 (lower is better)
Translates to: LHIPLNDRQLSD*PLQVRQGAVAT
Trigger: CGTGGCCACGGCGCCCTGCCTGACCTGGAGCGGGCAGTCACTGAGCTGACGGTCATTCAGCGGGATGTGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp GCGACAGCTCTCCTTGCACCCGCAGCGGCTGCCCGTTaGCCAGGAACACCCAGTGGTGAGAGTGGTCCATGC +
Preference number: 6 (lower is better)
Translates to: ATALLAPAAAAR*PGTPSGESGPC
Trigger: GCATGGACCACTCTCACCACTGGGTGTTCCTGGGCAACGGGCAGCCGCTGCGGGTGCAAGGAGAGCTGTCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp AGGCTGGGCTTGGTCACATCCAACTCAGGGCTGCCGTaGCGCCCGGCTGTCTCAGATGCAGCTCCGGGACCA +
Preference number: 6 (lower is better)
Translates to: RLGLVTSNSGLP*RPAVSDAAPGP
Trigger: TGGTCCCGGAGCTGCATCTGAGACAGCCGGGCGCCACGGCAGCCCTGAGTTGGATGTGACCAAGCCCAGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp CGCGTACATGCCGATCTCCAGGTCTGTCAGACCCCGTaGCACCTGCAGGAAGCCGGTGGGCAGCGGCAGGAA +
Preference number: 6 (lower is better)
Translates to: RVHADLQVCQTP*HLQEAGGQRQE
Trigger: TTCCTGCCGCTGCCCACCGGCTTCCTGCAGGTGCCACGGGGTCTGACAGACCTGGAGATCGGCATGTACGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp TGCCCAGGAACACCCAGTGGTGAGAGTGGTCCATGCTaGTCTGGCCCTCGGGCGGGATGCGCTTGTGCCGGT +
Preference number: 6 (lower is better)
Translates to: CPGTPSGESGPC*SGPRAGCACAG
Trigger: ACCGGCACAAGCGCATCCCGCCCGAGGGCCAGACCAGCATGGACCACTCTCACCACTGGGTGTTCCTGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 72 bp AGCAACAGTCGACGACGACTTGGCCCCAGGCTGGGCTaGGTCACATCCAACTCAGGGCTGCCGTGGCGCCCG +
Preference number: 6 (lower is better)
Translates to: SNSRRRLGPRLG*VTSNSGLPWRP
Trigger: CGGGCGCCACGGCAGCCCTGAGTTGGATGTGACCAAGCCCAGCCTGGGGCCAAGTCGTCGTCGACTGTTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 90 bp GTCCGAGAGAGCAACAGTCGACGACGACTTGGCCCCAGGCTGGGCTaGGTCACATCCAACTCAGGGCTGCCGTGGCGCCCGGCTGTCTCA +
Preference number: 6 (lower is better)
Translates to: VRESNSRRRLGPRLG*VTSNSGLPWRPAVS
Trigger: TGAGACAGCCGGGCGCCACGGCAGCCCTGAGTTGGATGTGACCAAGCCCAGCCTGGGGCCAAGTCGTCGTCGACTGTTGCTCTCTCGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp GGATGGCGAGGCAGAAGACGCCCAGCAGCGCGTACATaGCGATCTCCAGGTCTGTCAGACCCCGTGGCACCT +
Preference number: 6 (lower is better)
Translates to: GWRGRRRPAART*RSPGLSDPVAP
Trigger: AGGTGCCACGGGGTCTGACAGACCTGGAGATCGGCATGTACGCGCTGCTGGGCGTCTTCTGCCTCGCCATCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp GATGCTGAGCACTTCCCCGGGCTTGAGGGGCCGGTCTaGCAGGCGGATCATCAGGTTGCTGTCCAGCCTGTG +
Preference number: 6 (lower is better)
Translates to: DAEHFPGLEGPV*QADHQVAVQPV
Trigger: CACAGGCTGGACAGCAACCTGATGATCCGCCTGCCAGACCGGCCCCTCAAGCCCGGGGAAGTGCTCAGCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp GCAGGGGTGTGCTCTGAGCCCAGGCCACATCCACGGTaGCTGTTGAGTGCTTTGCCCCAGTCAGCAGCTCCG +
Preference number: 6 (lower is better)
Translates to: AGVCSEPRPHPR*LLSALPQSAAP
Trigger: CGGAGCTGCTGACTGGGGCAAAGCACTCAACAGCCACCGTGGATGTGGCCTGGGCTCAGAGCACACCCCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 72 bp AAGGGCCCCAGAGAGACGTTGAGGACCGGCAGCTCCTaGGTCTGGAACACCACGAAGGGCTCGGAGCGCTGC +
Preference number: 6 (lower is better)
Translates to: KGPRETLRTGSS*VWNTTKGSERC
Trigger: GCAGCGCTCCGAGCCCTTCGTGGTGTTCCAGACCAAGGAGCTGCCGGTCCTCAACGTCTCTCTGGGGCCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 90 bp CTGGTGCTGAAGGGCCCCAGAGAGACGTTGAGGACCGGCAGCTCCTaGGTCTGGAACACCACGAAGGGCTCGGAGCGCTGCAGAGAGCTG +
Preference number: 6 (lower is better)
Translates to: LVLKGPRETLRTGSS*VWNTTKGSERCREL
Trigger: CAGCTCTCTGCAGCGCTCCGAGCCCTTCGTGGTGTTCCAGACCAAGGAGCTGCCGGTCCTCAACGTCTCTCTGGGGCCCTTCAGCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS TCA 72 bp TCCATGGCCAGGGGCAGGATGGCTTGCACATCCCGCTaGATGACCGTCAGCTCAGTGACTGCCCGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SMARGRMACTSR*MTVSSVTARSR
Trigger: CCTGGAGCGGGCAGTCACTGAGCTGACGGTCATTCAGCGGGATGTGCAAGCCATCCTGCCCCTGGCCATGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp GAGAGTGGTCCATGCTGGTCTGGCCCTCGGGCGGGATaGGCTTGTGCCGGTAGCGCAGCACAAAAACGATGC +
Preference number: 6 (lower is better)
Translates to: ESGPCWSGPRAG*ACAGSAAQKRC
Trigger: GCATCGTTTTTGTGCTGCGCTACCGGCACAAGCGCATCCCGCCCGAGGGCCAGACCAGCATGGACCACTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp GAGAGAGCAACAGTCGACGACGACTTGGCCCCAGGCTaGGCTTGGTCACATCCAACTCAGGGCTGCCGTGGC +
Preference number: 6 (lower is better)
Translates to: ERATVDDDLAPG*AWSHPTQGCRG
Trigger: GCCACGGCAGCCCTGAGTTGGATGTGACCAAGCCCAGCCTGGGGCCAAGTCGTCGTCGACTGTTGCTCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp GGGAGGGGTCCGAGAGAGCAACAGTCGACGACGACTTaGCCCCAGGCTGGGCTTGGTCACATCCAACTCAGG +
Preference number: 6 (lower is better)
Translates to: GRGPREQQSTTT*PQAGLGHIQLR
Trigger: CCTGAGTTGGATGTGACCAAGCCCAGCCTGGGGCCAAGTCGTCGTCGACTGTTGCTCTCTCGGACCCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp CCCAGAGAGACGTTGAGGACCGGCAGCTCCTTGGTCTaGAACACCACGAAGGGCTCGGAGCGCTGCAGAGAG +
Preference number: 6 (lower is better)
Translates to: PRETLRTGSSLV*NTTKGSERCRE
Trigger: CTCTCTGCAGCGCTCCGAGCCCTTCGTGGTGTTCCAGACCAAGGAGCTGCCGGTCCTCAACGTCTCTCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp CCCTCCCAAAGTGCACCCGCAGGCCCACAGGGGTCGTaGCGAGCACACTCTTGCGTTTGGTTTTCTGGCAGC +
Preference number: 6 (lower is better)
Translates to: PSQSAPAGPQGS*RAHSCVWFSGS
Trigger: GCTGCCAGAAAACCAAACGCAAGAGTGTGCTCGCCACGACCCCTGTGGGCCTGCGGGTGCACTTTGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321639.7
ENST00000577271.1
ENST00000631683.2
CDS CAA 72 bp CGGGAGGGGTCCGAGAGAGCAACAGTCGACGACGACTaGGCCCCAGGCTGGGCTTGGTCACATCCAACTCAG +
Preference number: 6 (lower is better)
Translates to: REGSERATVDDD*APGWAWSHPTQ
Trigger: CTGAGTTGGATGTGACCAAGCCCAGCCTGGGGCCAAGTCGTCGTCGACTGTTGCTCTCTCGGACCCCTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 90 bp GTGTGCTCTGAGCCCAGGCCACATCCACGGTGGCTGTTGAGTGCTTaGCCCCAGTCAGCAGCTCCGAGGTCACATGCCACTGGCCACTCC +
Preference number: 6 (lower is better)
Translates to: VCSEPRPHPRWLLSA*PQSAAPRSHATGHS
Trigger: GGAGTGGCCAGTGGCATGTGACCTCGGAGCTGCTGACTGGGGCAAAGCACTCAACAGCCACCGTGGATGTGGCCTGGGCTCAGAGCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 90 bp TGCGCCCTGCCCCGAGCCCTTCCTGCCCAGGACGTCGACTCCAGCTaGATGACCATAAACGCTGTAAGATGCAGAGGGGCTCCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: CALPRALPAQDVDSS*MTINAVRCRGAPAA
Trigger: AGCTGCAGGAGCCCCTCTGCATCTTACAGCGTTTATGGTCATCAAGCTGGAGTCGACGTCCTGGGCAGGAAGGGCTCGGGGCAGGGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 90 bp TGCACCCGCAGGCCCACAGGGGTCGTGGCGAGCACACTCTTGCGTTaGGTTTTCTGGCAGCTCTCAGCGATGGTTAGCTCTGCGCGAAGC +
Preference number: 6 (lower is better)
Translates to: CTRRPTGVVASTLLR*VFWQLSAMVSSARS
Trigger: GCTTCGCGCAGAGCTAACCATCGCTGAGAGCTGCCAGAAAACCAAACGCAAGAGTGTGCTCGCCACGACCCCTGTGGGCCTGCGGGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321639.7
ENST00000577271.1
ENST00000631683.2
CDS CAA 72 bp GAGCCCAGGCCACATCCACGGTGGCTGTTGAGTGCTTaGCCCCAGTCAGCAGCTCCGAGGTCACATGCCACT +
Preference number: 6 (lower is better)
Translates to: EPRPHPRWLLSA*PQSAAPRSHAT
Trigger: AGTGGCATGTGACCTCGGAGCTGCTGACTGGGGCAAAGCACTCAACAGCCACCGTGGATGTGGCCTGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 72 bp GTGTGCTCTGAGCCCAGGCCACATCCACGGTGGCTGTaGAGTGCTTTGCCCCAGTCAGCAGCTCCGAGGTCA +
Preference number: 6 (lower is better)
Translates to: VCSEPRPHPRWL*SALPQSAAPRS
Trigger: TGACCTCGGAGCTGCTGACTGGGGCAAAGCACTCAACAGCCACCGTGGATGTGGCCTGGGCTCAGAGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 90 bp CCAAAGTGCACCCGCAGGCCCACAGGGGTCGTGGCGAGCACACTCTaGCGTTTGGTTTTCTGGCAGCTCTCAGCGATGGTTAGCTCTGCG +
Preference number: 6 (lower is better)
Translates to: PKCTRRPTGVVASTL*RLVFWQLSAMVSSA
Trigger: CGCAGAGCTAACCATCGCTGAGAGCTGCCAGAAAACCAAACGCAAGAGTGTGCTCGCCACGACCCCTGTGGGCCTGCGGGTGCACTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321639.7
ENST00000577271.1
ENST00000631683.2
CDS GCA 72 bp GAAAGCCGGCTAATGCGCCCTGCCCCGAGCCCTTCCTaGCCAGGACGTCGACTCCAGCTTGATGACCATAAA +
Preference number: 6 (lower is better)
Translates to: ESRLMRPAPSPS*PGRRLQLDDHK
Trigger: TTTATGGTCATCAAGCTGGAGTCGACGTCCTGGGCAGGAAGGGCTCGGGGCAGGGCGCATTAGCCGGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp CCCGCAGGCCCACAGGGGTCGTGGCGAGCACACTCTTaGGTTTGGTTTTCTGGCAGCTCTCAGCGATGGTTA +
Preference number: 6 (lower is better)
Translates to: PAGPQGSWRAHS*VWFSGSSQRWL
Trigger: TAACCATCGCTGAGAGCTGCCAGAAAACCAAACGCAAGAGTGTGCTCGCCACGACCCCTGTGGGCCTGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321639.7
ENST00000577271.1
ENST00000631683.2
CDS GCA 72 bp GCTGGGAGGCAGGACTTCGCAGCTCTGCCTCAGGTCTaGAACCAGGAACCAGTGTCCAGAGGTCATGAGAGG +
Preference number: 6 (lower is better)
Translates to: AGRQDFAALPQV*NQEPVSRGHER
Trigger: CCTCTCATGACCTCTGGACACTGGTTCCTGGTTGCAGACCTGAGGCAGAGCTGCGAAGTCCTGCCTCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577271.1
CDS CCA 72 bp GTGACCACCTGGTCAGTGCCCTCGGATGATGTCGTGTaGAACTGGGTGAAGACCTGCAGGGTGGCATGCTGG +
Preference number: 6 (lower is better)
Translates to: VTTWSVPSDDVV*NWVKTCRVACW
Trigger: CCAGCATGCCACCCTGCAGGTCTTCACCCAGTTCCACACGACATCATCCGAGGGCACTGACCAGGTGGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp TCCACCAGCCAGTCCGGGCCTAACATGGTGACCACCTaGTCAGTGCCCTCGGATGATGTCGTGTGGAACTGG +
Preference number: 6 (lower is better)
Translates to: STSQSGPNMVTT*SVPSDDVVWNW
Trigger: CCAGTTCCACACGACATCATCCGAGGGCACTGACCAGGTGGTCACCATGTTAGGCCCGGACTGGCTGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 72 bp ACCCGCAGGCCCACAGGGGTCGTGGCGAGCACACTCTaGCGTTTGGTTTTCTGGCAGCTCTCAGCGATGGTT +
Preference number: 6 (lower is better)
Translates to: TRRPTGVVASTL*RLVFWQLSAMV
Trigger: AACCATCGCTGAGAGCTGCCAGAAAACCAAACGCAAGAGTGTGCTCGCCACGACCCCTGTGGGCCTGCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321639.7
ENST00000577271.1
ENST00000631683.2
CDS CAA 90 bp GCGGAGATGTCCAGGACGAGGCCATTCACCTCGATGGCAATGACCTaGACAGGGATGGCCACTGTCCGGCCAGTCAGAATGGCCGTGTTG +
Preference number: 6 (lower is better)
Translates to: AEMSRTRPFTSMAMT*TGMATVRPVRMAVL
Trigger: CAACACGGCCATTCTGACTGGCCGGACAGTGGCCATCCCTGTCAAGGTCATTGCCATCGAGGTGAATGGCCTCGTCCTGGACATCTCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp CTCACGGCCCAGCTCGAATCCGAACTCACTCGAGGGTaGCGACTTCCAACGCAATCCCCAGTTTCCTCGGTT +
Preference number: 6 (lower is better)
Translates to: LTAQLESELTRG*RLPTQSPVSSV
Trigger: AACCGAGGAAACTGGGGATTGCGTTGGAAGTCGGCACCCTCGAGTGAGTTCGGATTCGAGCTGGGCCGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp GACTGGCTGGTGAAGTTCTCCATTTCAAAGTCCAGCTaGAAGATCTCCAAGGGGCCCTGGCCCTCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: DWLVKFSISKSS*KISKGPWPSLG
Trigger: CCCCAGGGAGGGCCAGGGCCCCTTGGAGATCTTGCAGCTGGACTTTGAAATGGAGAACTTCACCAGCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 72 bp CCCCGAGCCCTTCCTGCCCAGGACGTCGACTCCAGCTaGATGACCATAAACGCTGTAAGATGCAGAGGGGCT +
Preference number: 6 (lower is better)
Translates to: PRALPAQDVDSS*MTINAVRCRGA
Trigger: AGCCCCTCTGCATCTTACAGCGTTTATGGTCATCAAGCTGGAGTCGACGTCCTGGGCAGGAAGGGCTCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 90 bp CCAGTCAGCAGCTCCGAGGTCACATGCCACTGGCCACTCCGTGACTaGGTACCTAAAAGGGTCACACCCTTCTTGGCCTTCACCCTGAGT +
Preference number: 6 (lower is better)
Translates to: PVSSSEVTCHWPLRD*VPKRVTPFLAFTLS
Trigger: ACTCAGGGTGAAGGCCAAGAAGGGTGTGACCCTTTTAGGTACCAAGTCACGGAGTGGCCAGTGGCATGTGACCTCGGAGCTGCTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 72 bp GATGATCTCTGTGTCCATGGCCAGGGGCAGGATGGCTaGCACATCCCGCTGAATGACCGTCAGCTCAGTGAC +
Preference number: 6 (lower is better)
Translates to: DDLCVHGQGQDG*HIPLNDRQLSD
Trigger: GTCACTGAGCTGACGGTCATTCAGCGGGATGTGCAAGCCATCCTGCCCCTGGCCATGGACACAGAGATCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 72 bp TCCAGGACGAGGCCATTCACCTCGATGGCAATGACCTaGACAGGGATGGCCACTGTCCGGCCAGTCAGAATG +
Preference number: 6 (lower is better)
Translates to: SRTRPFTSMAMT*TGMATVRPVRM
Trigger: CATTCTGACTGGCCGGACAGTGGCCATCCCTGTCAAGGTCATTGCCATCGAGGTGAATGGCCTCGTCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 72 bp AGGCCCACAGGGGTCGTGGCGAGCACACTCTTGCGTTaGGTTTTCTGGCAGCTCTCAGCGATGGTTAGCTCT +
Preference number: 6 (lower is better)
Translates to: RPTGVVASTLLR*VFWQLSAMVSS
Trigger: AGAGCTAACCATCGCTGAGAGCTGCCAGAAAACCAAACGCAAGAGTGTGCTCGCCACGACCCCTGTGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321639.7
ENST00000577271.1
ENST00000631683.2
CDS TCA 72 bp CCTGCTACTCCGGCTGGCGCCTCTATGCAATCTCTTTaGTTCTGCGCATGTAATTGTGCAGGTCCGGGGGTG +
Preference number: 6 (lower is better)
Translates to: PATPAGASMQSL*FCACNCAGPGV
Trigger: CACCCCCGGACCTGCACAATTACATGCGCAGAATCAAAGAGATTGCATAGAGGCGCCAGCCGGAGTAGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp TTCACTTGGCTGAGGCGGGCATCTGAGAGCTCAATGTaGAAGGGCAGCTTGGGGACCCAGACTGTCATTTCC +
Preference number: 6 (lower is better)
Translates to: FTWLRRASESSM*KGSLGTQTVIS
Trigger: GGAAATGACAGTCTGGGTCCCCAAGCTGCCCTTGCACATTGAGCTCTCAGATGCCCGCCTCAGCCAAGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp ATCCCCAGTTTCCTCGGTTTCGGTAGTAACCGCACATaGATAGCGCCGCTTTCTTCCTCCAAGCCCCTGCAG +
Preference number: 6 (lower is better)
Translates to: IPSFLGFGSNRT*IAPLSSSKPLQ
Trigger: CTGCAGGGGCTTGGAGGAAGAAAGCGGCGCTATCCATGTGCGGTTACTACCGAAACCGAGGAAACTGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp GCTCCGAGGTCACATGCCACTGGCCACTCCGTGACTTaGTACCTAAAAGGGTCACACCCTTCTTGGCCTTCA +
Preference number: 6 (lower is better)
Translates to: APRSHATGHSVT*YLKGSHPSWPS
Trigger: TGAAGGCCAAGAAGGGTGTGACCCTTTTAGGTACCAAGTCACGGAGTGGCCAGTGGCATGTGACCTCGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CCA 72 bp TTTGCCCCAGTCAGCAGCTCCGAGGTCACATGCCACTaGCCACTCCGTGACTTGGTACCTAAAAGGGTCACA +
Preference number: 6 (lower is better)
Translates to: FAPVSSSEVTCH*PLRDLVPKRVT
Trigger: TGTGACCCTTTTAGGTACCAAGTCACGGAGTGGCCAGTGGCATGTGACCTCGGAGCTGCTGACTGGGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS CAA 72 bp AGCTCCGAGGTCACATGCCACTGGCCACTCCGTGACTaGGTACCTAAAAGGGTCACACCCTTCTTGGCCTTC +
Preference number: 6 (lower is better)
Translates to: SSEVTCHWPLRD*VPKRVTPFLAF
Trigger: GAAGGCCAAGAAGGGTGTGACCCTTTTAGGTACCAAGTCACGGAGTGGCCAGTGGCATGTGACCTCGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS TCA 72 bp ACGGTAGTCAATGTGCCACATGATCCTCCGCTTGACTaGCTGGCTGGTGAAGTTCTCCATTTCAAAGTCCAG +
Preference number: 6 (lower is better)
Translates to: TVVNVPHDPPLD*LAGEVLHFKVQ
Trigger: CTGGACTTTGAAATGGAGAACTTCACCAGCCAGTCAGTCAAGCGGAGGATCATGTGGCACATTGACTACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2
CDS GCA 72 bp GCCCAGCATAAAAATCCCAGGTCAGGTGCAAATGAATaGTGTCTTTCTCAAAGAAAGAGAAAATCCAGACAA +
Preference number: 6 (lower is better)
Translates to: AQHKNPRSGANE*CLSQRKRKSRQ
Trigger: TTGTCTGGATTTTCTCTTTCTTTGAGAAAGACAGCATTCATTTGCACCTGACCTGGGATTTTTATGCTGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321639.7
ENST00000631683.2