RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM132D (Homo sapiens)

Ensembl gene IDs: ENSG00000151952

Ensembl transcript IDs: ENST00000389441.8, ENST00000422113.7

Found 672 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCACGGCCTCTTCTGCCCACCACCCGCTGCCCCCGACCATCTTTTaGAGGATCCTATCTGGCTGGCAATCACCCAACACACCATTCTCT +
Preference number: 1 (lower is better)
Translates to: STASSAHHPLPPTIF*RILSGWQSPNTPFS
Trigger: AGAGAATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGAAGAGGCCGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 90 bp GTCGATGCGGACTCCAGGCCTCGCCGCCGAGCCGGGGTCATTGGCTaGGGCTGTATGGATAGTGTCATCCTTATTTTGTCCTGCTGCTTT +
Preference number: 1 (lower is better)
Translates to: VDADSRPRRRAGVIG*GCMDSVILILSCCF
Trigger: AAAGCAGCAGGACAAAATAAGGATGACACTATCCATACAGCCTCAGCCAATGACCCCGGCTCGGCGGCGAGGCCTGGAGTCCGCATCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR GCA 90 bp CGGCGGCACTGGACTGCCTGTGATCGCGCTCACAGCAAGATGTGCTaGTCCAGTTTCGATGACACGCTTCCTCCCATTGATCCATGGATG +
Preference number: 1 (lower is better)
Translates to: RRHWTACDRAHSKMC*SSFDDTLPPIDPWM
Trigger: CATCCATGGATCAATGGGAGGAAGCGTGTCATCGAAACTGGAGCAGCACATCTTGCTGTGAGCGCGATCACAGGCAGTCCAGTGCCGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CCA 90 bp TGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTaGCTGGCAATCACCCAACACACCATTCTCTACCTTGGAGTGAGC +
Preference number: 1 (lower is better)
Translates to: CPPPAAPDHLLQDPI*LAITQHTILYLGVS
Trigger: GCTCACTCCAAGGTAGAGAATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 90 bp TCGCACCTCCAAGATGAAGAAGGTTTCTGTGCTGTCCGGTGTGTGTaGGGCTGGGCTTCCTGCTGGATCCACCACTTTCACACCCAGAAC +
Preference number: 1 (lower is better)
Translates to: SHLQDEEGFCAVRCV*GWASCWIHHFHTQN
Trigger: GTTCTGGGTGTGAAAGTGGTGGATCCAGCAGGAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCTTCTTCATCTTGGAGGTGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR GCA 90 bp ATGCATGATAAACCTCTTAAGCAAGACACTGTACTCTGGAATGTGTaGGTCGATGCGGACTCCAGGCCTCGCCGCCGAGCCGGGGTCATT +
Preference number: 1 (lower is better)
Translates to: MHDKPLKQDTVLWNV*VDADSRPRRRAGVI
Trigger: AATGACCCCGGCTCGGCGGCGAGGCCTGGAGTCCGCATCGACGCACACATTCCAGAGTACAGTGTCTTGCTTAAGAGGTTTATCATGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR GCA 90 bp GCTGAACCTTTCGGGGCTGACTGCAGGACCAAGTGCTTGCAAACCTaGATCTTCACCACATGCACTGATGCCCCTTATCCCTTCGCACCT +
Preference number: 1 (lower is better)
Translates to: AEPFGADCRTKCLQT*IFTTCTDAPYPFAP
Trigger: AGGTGCGAAGGGATAAGGGGCATCAGTGCATGTGGTGAAGATGCAGGTTTGCAAGCACTTGGTCCTGCAGTCAGCCCCGAAAGGTTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 90 bp TTCACCACATGCACTGATGCCCCTTATCCCTTCGCACCTCCAAGATaGAGAAGGTTTCTGTGCTGTCCGGTGTGTGTGAGGCTGGGCTTC +
Preference number: 1 (lower is better)
Translates to: FTTCTDAPYPFAPPR*RRFLCCPVCVRLGF
Trigger: GAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCTTCTTCATCTTGGAGGTGCGAAGGGATAAGGGGCATCAGTGCATGTGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CCA 90 bp ACTCCAGGCCTCGCCGCCGAGCCGGGGTCATTGGCTGAGGCTGTATaGATAGTGTCATCCTTATTTTGTCCTGCTGCTTTGTTTCTCTTC +
Preference number: 1 (lower is better)
Translates to: TPGLAAEPGSLAEAV*IVSSLFCPAALFLF
Trigger: GAAGAGAAACAAAGCAGCAGGACAAAATAAGGATGACACTATCCATACAGCCTCAGCCAATGACCCCGGCTCGGCGGCGAGGCCTGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR GCA 90 bp GGAATGTATATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATaGCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATAT +
Preference number: 1 (lower is better)
Translates to: GMYIPWYGIHRDYRP*LETSLFKDGRRGTY
Trigger: ATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 90 bp CATGTTCCCTTTCAGTCCTTGTCAGCCACTTCCTTGGCCTGTCCATaGTCTGAGACAGCTCTGGCCCAGCCTTTGAGAGACAATGACTCA +
Preference number: 1 (lower is better)
Translates to: HVPFQSLSATSLACP*SETALAQPLRDNDS
Trigger: TGAGTCATTGTCTCTCAAAGGCTGGGCCAGAGCTGTCTCAGATCATGGACAGGCCAAGGAAGTGGCTGACAAGGACTGAAAGGGAACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR GCA 90 bp GAGTCATGGCTGGTCTTAAGCAATGCTGAACCTTTCGGGGCTGACTaGAGGACCAAGTGCTTGCAAACCTGCATCTTCACCACATGCACT +
Preference number: 1 (lower is better)
Translates to: ESWLVLSNAEPFGAD*RTKCLQTCIFTTCT
Trigger: AGTGCATGTGGTGAAGATGCAGGTTTGCAAGCACTTGGTCCTGCAGTCAGCCCCGAAAGGTTCAGCATTGCTTAAGACCAGCCATGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 90 bp CTAGTAAAGCAAGGGAATGTATATCCCCTGGTATGGAATTCACCGTaGCTACCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACG +
Preference number: 1 (lower is better)
Translates to: LVKQGNVYPLVWNSP*LPPMPRDQPLQRRT
Trigger: CGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACATTCCCTTGCTTTACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 90 bp CTGCAGGACCAAGTGCTTGCAAACCTGCATCTTCACCACATGCACTaGTGCCCCTTATCCCTTCGCACCTCCAAGATGAAGAAGGTTTCT +
Preference number: 1 (lower is better)
Translates to: LQDQVLANLHLHHMH*CPLSLRTSKMKKVS
Trigger: AGAAACCTTCTTCATCTTGGAGGTGCGAAGGGATAAGGGGCATCAGTGCATGTGGTGAAGATGCAGGTTTGCAAGCACTTGGTCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 90 bp ATCACCCAACCAAACAAGGTAGGTAAGCTTGCGGACAGGAGCAGGTaGCTTACTGGCTGCAGAAACCTCAGTCTCAAGAGCACCACAGTT +
Preference number: 1 (lower is better)
Translates to: ITQPNKVGKLADRSR*LTGCRNLSLKSTTV
Trigger: AACTGTGGTGCTCTTGAGACTGAGGTTTCTGCAGCCAGTAAGTCACCTGCTCCTGTCCGCAAGCTTACCTACCTTGTTTGGTTGGGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR GCA 90 bp GTCTTAAGCAATGCTGAACCTTTCGGGGCTGACTGCAGGACCAAGTaGTTGCAAACCTGCATCTTCACCACATGCACTGATGCCCCTTAT +
Preference number: 1 (lower is better)
Translates to: VLSNAEPFGADCRTK*LQTCIFTTCTDAPY
Trigger: ATAAGGGGCATCAGTGCATGTGGTGAAGATGCAGGTTTGCAAGCACTTGGTCCTGCAGTCAGCCCCGAAAGGTTCAGCATTGCTTAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 90 bp CAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTaGAAGACCCATCCCAAGTGGCCCTGTTTTCTTTCTAGTAAAGCA +
Preference number: 1 (lower is better)
Translates to: QPRGHIFGQEICHEQ*KTHPKWPCFLSSKA
Trigger: TGCTTTACTAGAAAGAAAACAGGGCCACTTGGGATGGGTCTTTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CCA 90 bp ATGTGCTGCTCCAGTTTCGATGACACGCTTCCTCCCATTGATCCATaGATGCGATCCATGGATGCTCCACCTGAGTTGTACTTTTCTTCC +
Preference number: 1 (lower is better)
Translates to: MCCSSFDDTLPPIDP*MRSMDAPPELYFSS
Trigger: GGAAGAAAAGTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATCGAAACTGGAGCAGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CCA 90 bp GGATCCTATCTGGCTGGCAATCACCCAACACACCATTCTCTACCTTaGAGTGAGCGTGAGATGAGGCAGGAATTCTCTGATGTATCCTTG +
Preference number: 1 (lower is better)
Translates to: GSYLAGNHPTHHSLP*SEREMRQEFSDVSL
Trigger: CAAGGATACATCAGAGAATTCCTGCCTCATCTCACGCTCACTCCAAGGTAGAGAATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CCA 90 bp TTCATAGGCTTCATAAGTGAAGGGATTCAGGGATATCCAGAGTCATaGCTGGTCTTAAGCAATGCTGAACCTTTCGGGGCTGACTGCAGG +
Preference number: 1 (lower is better)
Translates to: FIGFISEGIQGYPES*LVLSNAEPFGADCR
Trigger: CCTGCAGTCAGCCCCGAAAGGTTCAGCATTGCTTAAGACCAGCCATGACTCTGGATATCCCTGAATCCCTTCACTTATGAAGCCTATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 90 bp AATTCTCTGATGTATCCTTGCCCCCATCTTCATAGGCTTCATAAGTaGAGGGATTCAGGGATATCCAGAGTCATGGCTGGTCTTAAGCAA +
Preference number: 1 (lower is better)
Translates to: NSLMYPCPHLHRLHK*RDSGISRVMAGLKQ
Trigger: TTGCTTAAGACCAGCCATGACTCTGGATATCCCTGAATCCCTTCACTTATGAAGCCTATGAAGATGGGGGCAAGGATACATCAGAGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR GCA 90 bp TACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGCGGCTaGAGTATTCAACAGAACATGACACAGGTAAGAATGGAAAGAAAT +
Preference number: 1 (lower is better)
Translates to: YSTFYTQMDLEAGSG*SIQQNMTQVRMERN
Trigger: ATTTCTTTCCATTCTTACCTGTGTCATGTTCTGTTGAATACTGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 90 bp ACCACAGTTGCAGGGGAGAGGGCTAAGGTTGGGAGGGTAAACTGGTaGAATTTACACACACATGATCTAAAGAGAATTCAATTCTATGGA +
Preference number: 1 (lower is better)
Translates to: TTVAGERAKVGRVNW*NLHTHDLKRIQFYG
Trigger: TCCATAGAATTGAATTCTCTTTAGATCATGTGTGTGTAAATTTCACCAGTTTACCCTCCCAACCTTAGCCCTCTCCCCTGCAACTGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 90 bp ATTGAATATTGGAGCCATGTGGATTTTACAATATCCAAATTGCTTTaGTTCGAGAGAGAGAGGCTGTTCTTTCCTGGACGCTCTCAGACG +
Preference number: 1 (lower is better)
Translates to: IEYWSHVDFTISKLL*FERERLFFPGRSQT
Trigger: CGTCTGAGAGCGTCCAGGAAAGAACAGCCTCTCTCTCTCGAATCAAAGCAATTTGGATATTGTAAAATCCACATGGCTCCAATATTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR GCA 90 bp GCAATATTGAATATTGGAGCCATGTGGATTTTACAATATCCAAATTaGTTTGATTCGAGAGAGAGAGGCTGTTCTTTCCTGGACGCTCTC +
Preference number: 1 (lower is better)
Translates to: AILNIGAMWILQYPN*FDSRERGCSFLDAL
Trigger: GAGAGCGTCCAGGAAAGAACAGCCTCTCTCTCTCGAATCAAAGCAATTTGGATATTGTAAAATCCACATGGCTCCAATATTCAATATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR GCA 90 bp CGATCCATGGATGCTCCACCTGAGTTGTACTTTTCTTCCATAGTCTaGAATATTGAATATTGGAGCCATGTGGATTTTACAATATCCAAA +
Preference number: 1 (lower is better)
Translates to: RSMDAPPELYFSSIV*NIEYWSHVDFTISK
Trigger: TTTGGATATTGTAAAATCCACATGGCTCCAATATTCAATATTGCAGACTATGGAAGAAAAGTACAACTCAGGTGGAGCATCCATGGATCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 90 bp GCAATGCAGTGGAGGAATAGAAATGGATACATTGTGAACTTGATATaGATCAAAAGAGCGTGGTTCTTTGAACCTGATTCAAATTCTATG +
Preference number: 1 (lower is better)
Translates to: AMQWRNRNGYIVNLI*IKRAWFFEPDSNSM
Trigger: CATAGAATTTGAATCAGGTTCAAAGAACCACGCTCTTTTGATTCATATCAAGTTCACAATGTATCCATTTCTATTCCTCCACTGCATTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCATGCCTCCCACAGCTaGCGGCGGCACTGGACTGCC +
Preference number: 2 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWHASHS*RRHWTA
Trigger: GGCAGTCCAGTGCCGCCGTCAGCTGTGGGAGGCATG...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGGCACTGGACTGCCTGTaGTCGCGCTCACAGCAAGAT +
Preference number: 2 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWALDCL*SRSQQD
Trigger: ATCTTGCTGTGAGCGCGATCACAGGCAGTCCAGTGC...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGTCCTTGGCCTGTCCATaGTCTGAGACAGCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVESLACP*SETALA
Trigger: GGCCAGAGCTGTCTCAGATCATGGACAGGCCAAGGA...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR GCA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACCGTGACTACCGCCCATaGCTAGAGACCAGCCTCTTC +
Preference number: 2 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHRDYRP*LETSLF
Trigger: GAAGAGGCTGGTCTCTAGGCATGGGCGGTAGTCACG...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CCA 90 bp ATGCCTCCCACAGCTGACGGCGGCACTGGACTGCCTGTGATCGCGCTCACAGCAGAGGCTGTTCTTTCCTaGACGCTCTCAGACGCTCAG +
Preference number: 2 (lower is better)
Translates to: MPPTADGGTGLPVIALTAEAVLS*TLSDAQ
Trigger: CTGAGCGTCTGAGAGCGTCCAGGAAAGAACAGCCTC...TGCTGTGAGCGCGATCACAGGCAGTCCAGTGCCGCCGTCAGCTGTGGGAGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CAA 90 bp CCCCCAACTCCACACGCCCTGCACGTTCCACACAGGCACCCCGATTaGTCTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGC +
Preference number: 2 (lower is better)
Translates to: PPTPHALHVPHRHPD*SQQPRGHIFGQEIC
Trigger: GCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGCGTGTGGAGTTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CAA 90 bp CAGCACGGCCTCTTCTGCCCACCACCCGCTGCCCCCGACCATCTTTaGCAGGATCCTATCTGGCTGGCAATCACCCAACACACCATTCTC +
Preference number: 2 (lower is better)
Translates to: QHGLFCPPPAAPDHL*QDPIWLAITQHTIL
Trigger: GAGAATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGAAGAGGCCGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp ATGCCTCCCACAGCTGACGGCGGCACTGGACTGCCTGTGATCGCGCTCACAGCACACGCTTCCTCCCATTaGTCCATGGATGCGATCCAT +
Preference number: 2 (lower is better)
Translates to: MPPTADGGTGLPVIALTAHASSH*SMDAIH
Trigger: ATGGATCGCATCCATGGATCAATGGGAGGAAGCGTG...TGCTGTGAGCGCGATCACAGGCAGTCCAGTGCCGCCGTCAGCTGTGGGAGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR GCA 90 bp CGCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCAGTACTCTGGAATGTGTaGGTCGATGCGGACTCCAGG +
Preference number: 2 (lower is better)
Translates to: RPARSTQAPRFVSTASRPVLWNV*VDADSR
Trigger: CCTGGAGTCCGCATCGACGCACACATTCCAGAGTAC...TGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CAA 90 bp TGTGCGTCGATGCGGACTCCAGGCCTCGCCGCCGAGCCGGGGTCATaGGCTGAGGCTGTATGGATAGTGTCATCCTTATTTTGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: CASMRTPGLAAEPGS*AEAVWIVSSLFCPA
Trigger: AGCAGGACAAAATAAGGATGACACTATCCATACAGCCTCAGCCAATGACCCCGGCTCGGCGGCGAGGCCTGGAGTCCGCATCGACGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp CGCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACACGCTTCCTCCCATTaGTCCATGGATGCGATCCAT +
Preference number: 2 (lower is better)
Translates to: RPARSTQAPRFVSTASRPHASSH*SMDAIH
Trigger: ATGGATCGCATCCATGGATCAATGGGAGGAAGCGTG...TGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGATGTCACTTGGGAGTTaGCACAAAACCCAGGGGGAG +
Preference number: 2 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWMSLGS*HKTQGE
Trigger: CTCCCCCTGGGTTTTGTGTCAACTCCCAAGTGACAT...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR GCA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGAATGACTCACAATCATaGCTCCCACAGCTGACGGCG +
Preference number: 2 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWNDSQS*LPQLTA
Trigger: CGCCGTCAGCTGTGGGAGGCATGATTGTGAGTCATT...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR GCA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCGCAAATACTACAAACTaGCCTCTCCCTCCCCCACCC +
Preference number: 2 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICANTTN*PLPPPP
Trigger: GGGTGGGGGAGGGAGAGGGCAGTTTGTAGTATTTGC...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CCA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCGGTGACCAACGGCTTTaGGGAGGATGGCAATGCAGT +
Preference number: 2 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICGDQRL*GGWQCS
Trigger: ACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACC...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CCA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGTGTCAGCCACTTCCTTaGCCTGTCCATGATCTGAGA +
Preference number: 2 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWCQPLP*PVHDLR
Trigger: TCTCAGATCATGGACAGGCCAAGGAAGTGGCTGACA...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CCA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCACCATTCTCTACCTTaGAGTGAGCGTGAGATGAGG +
Preference number: 2 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWHHSLP*SEREMR
Trigger: CCTCATCTCACGCTCACTCCAAGGTAGAGAATGGTG...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR GCA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCCCATTGATCCATGGATaGGATCCATGGATGCTCCAC +
Preference number: 2 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICPLIHG*DPWMLH
Trigger: GTGGAGCATCCATGGATCGCATCCATGGATCAATGG...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR GCA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCGCTCACAGCAAGATGTaGTGCTCCAGTTTCGATGAC +
Preference number: 2 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICAHSKM*CSSFDD
Trigger: GTCATCGAAACTGGAGCAGCACATCTTGCTGTGAGC...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR GCA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACTGGGGAGGATGGCAATaGAGTGGAGGAATAGAAATG +
Preference number: 2 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHWGGWQ*SGGIEM
Trigger: CATTTCTATTCCTCCACTGCATTGCCATCCTCCCCA...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR GCA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACGTGACTACCGCCCATaGCTAGAGACCAGCCTCTTC +
Preference number: 2 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTRDYRP*LETSLF
Trigger: GAAGAGGCTGGTCTCTAGGCATGGGCGGTAGTCACG...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CCA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCCAAGACACTGTACTCTaGAATGTGTGCGTCGATGCG +
Preference number: 2 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICQDTVL*NVCVDA
Trigger: CGCATCGACGCACACATTCCAGAGTACAGTGTCTTG...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACCATGGATGCTCCACCTaGGTTGTACTTTTCTTCCAT +
Preference number: 2 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHHGCST*VVLFFH
Trigger: ATGGAAGAAAAGTACAACTCAGGTGGAGCATCCATG...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR GCA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGAAGTGCTTGCAAACCTaGATCTTCACCACATGCACT +
Preference number: 2 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWKCLQT*IFTTCT
Trigger: AGTGCATGTGGTGAAGATGCAGGTTTGCAAGCACTT...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CCA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGGGAATGTATATCCCCTaGTATGGAATTCACCGTGAC +
Preference number: 2 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWGMYIP*YGIHRD
Trigger: GTCACGGTGAATTCCATACCAGGGGATATACATTCC...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp GTTTCGATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCGCCGGGGTCATTGGCTaGGGCTGTATGGATAGTGTC +
Preference number: 2 (lower is better)
Translates to: VSMTRFLPLIHGCDPWMLAGVIG*GCMDSV
Trigger: GACACTATCCATACAGCCTCAGCCAATGACCCCGGC...GAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATCGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp CCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACCATTTCCTTGGCCTGTCCATaGTCTGAGACAGCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: PDHLLQDPIWLAITQHTISLACP*SETALA
Trigger: GGCCAGAGCTGTCTCAGATCATGGACAGGCCAAGGA...AATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CAA 90 bp CACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACATCTTaGGACAGGAGATCTGCCATGAACAGTGAAAGACCCATCCCAAGT +
Preference number: 2 (lower is better)
Translates to: HTGTPICLNSLEATS*DRRSAMNSERPIPS
Trigger: ACTTGGGATGGGTCTTTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR GCA 90 bp GTTTCGATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCGTACTCTGGAATGTGTaGGTCGATGCGGACTCCAGG +
Preference number: 2 (lower is better)
Translates to: VSMTRFLPLIHGCDPWMLVLWNV*VDADSR
Trigger: CCTGGAGTCCGCATCGACGCACACATTCCAGAGTAC...GAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATCGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR GCA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACAGACTGCAGGACCAAGTaGTTGCAAACCTGCATCTTC +
Preference number: 2 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTDCRTK*LQTCIF
Trigger: GAAGATGCAGGTTTGCAAGCACTTGGTCCTGCAGTC...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CAA 90 bp TTAAGCAATGCTGAACCTTTCGGGGCTGACTGCAGGACCAAGTGCTaGCAAACCTGCATCTTCACCACATGCACTGATGCCCCTTATCCC +
Preference number: 2 (lower is better)
Translates to: LSNAEPFGADCRTKC*QTCIFTTCTDAPYP
Trigger: GGGATAAGGGGCATCAGTGCATGTGGTGAAGATGCAGGTTTGCAAGCACTTGGTCCTGCAGTCAGCCCCGAAAGGTTCAGCATTGCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACATTGTGAACTTGATATaGATCAAAAGAGCGTGGTTC +
Preference number: 2 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHIVNLI*IKRAWF
Trigger: GAACCACGCTCTTTTGATTCATATCAAGTTCACAAT...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAAGTATGGAATTCACCGTaGCTACCGCCCATGCCTAGA +
Preference number: 2 (lower is better)
Translates to: LNSLEATSLDRRSAMNSEVWNSP*LPPMPR
Trigger: TCTAGGCATGGGCGGTAGTCACGGTGAATTCCATAC...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR GCA 90 bp ACCTGCATCTTCACCACATGCACTGATGCCCCTTATCCCTTCGCACCTCCAAGAGCTCACAGCAAGATGTaGTGCTCCAGTTTCGATGAC +
Preference number: 2 (lower is better)
Translates to: TCIFTTCTDAPYPFAPPRAHSKM*CSSFDD
Trigger: GTCATCGAAACTGGAGCAGCACATCTTGCTGTGAGC...TCTTGGAGGTGCGAAGGGATAAGGGGCATCAGTGCATGTGGTGAAGATGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CCA 90 bp ACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGCGGCTGCAGTATTCCGGCTTTGGGGAGGATaGCAATGCAGTGGAGGAATA +
Preference number: 2 (lower is better)
Translates to: TVHSTRRWIWKRAAAAVFRLWGG*QCSGGI
Trigger: TATTCCTCCACTGCATTGCCATCCTCCCCAAAGCCG...GAATACTGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CAA 90 bp ACAGCAAGATGTGCTGCTCCAGTTTCGATGACACGCTTCCTCCCATaGATCCATGGATGCGATCCATGGATGCTCCACCTGAGTTGTACT +
Preference number: 2 (lower is better)
Translates to: TARCAAPVSMTRFLP*IHGCDPWMLHLSCT
Trigger: AGTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATCGAAACTGGAGCAGCACATCTTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACATGGATGCTCCACCTaGGTTGTACTTTTCTTCCAT +
Preference number: 2 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTHGCST*VVLFFH
Trigger: ATGGAAGAAAAGTACAACTCAGGTGGAGCATCCATG...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp GCTTTGGGGAGGATGGCAATGCAGTGGAGGAATAGAAATGGATACATTGTGAACGCACTGGACTGCCTGTaGTCGCGCTCACAGCAAGAT +
Preference number: 2 (lower is better)
Translates to: ALGRMAMQWRNRNGYIVNALDCL*SRSQQD
Trigger: ATCTTGCTGTGAGCGCGATCACAGGCAGTCCAGTGC...GTTCACAATGTATCCATTTCTATTCCTCCACTGCATTGCCATCCTCCCCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR GCA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATAGAATGTGTGCGTCGATaGGGACTCCAGGCCTCGCCG +
Preference number: 2 (lower is better)
Translates to: RHTLKITEMRWRGSREKIECVRR*GLQASP
Trigger: CGGCGAGGCCTGGAGTCCGCATCGACGCACACATTC...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR GCA 90 bp ACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGCGGCTGCAGTATTCCACAGCAAGATGTGCTaGTCCAGTTTCGATGACACG +
Preference number: 2 (lower is better)
Translates to: TVHSTRRWIWKRAAAAVFHSKMC*SSFDDT
Trigger: CGTGTCATCGAAACTGGAGCAGCACATCTTGCTGTG...GAATACTGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR GCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGCTGATTCAAATTCTATaGCCAGTATCCTTAGTTTAC +
Preference number: 2 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVELIQIL*PVSLVY
Trigger: GTAAACTAAGGATACTGGGCATAGAATTTGAATCAG...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR GCA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGCAACTCCACACGCCCTaGACGTTCCACACAGGCACC +
Preference number: 2 (lower is better)
Translates to: HSYNLQYILHADGFGSGQQLHTP*TFHTGT
Trigger: GGTGCCTGTGTGGAACGTGCAGGGCGTGTGGAGTTG...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR GCA 90 bp CCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACCATTTGCATCTTCACCACATaGACTGATGCCCCTTATCCC +
Preference number: 2 (lower is better)
Translates to: PDHLLQDPIWLAITQHTICIFTT*TDAPYP
Trigger: GGGATAAGGGGCATCAGTGCATGTGGTGAAGATGCA...AATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR GCA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATACTGCCCACCACCCGCTaGCCCCGACCATCTTTTGCA +
Preference number: 2 (lower is better)
Translates to: RHTLKITEMRWRGSREKILPTTR*PRPSFA
Trigger: TGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAG...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CCA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAACATGGATGCGATCCATaGATGCTCCACCTGAGTTGT +
Preference number: 2 (lower is better)
Translates to: LNSLEATSLDRRSAMNSEHGCDP*MLHLSC
Trigger: ACAACTCAGGTGGAGCATCCATGGATCGCATCCATG...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp ATGTATATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATGCCTAGAGACCAGGCTGAAAGGTGAGTaGGAACCAATGTCTGTGTGT +
Preference number: 2 (lower is better)
Translates to: MYIPWYGIHRDYRPCLETRLKGE*EPMSVC
Trigger: ACACACAGACATTGGTTCTCACTCACCTTTCAGCCT...GGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp CCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACCATTTTCGCACCTCCAAGATaGAGAAGGTTTCTGTGCTGT +
Preference number: 2 (lower is better)
Translates to: PDHLLQDPIWLAITQHTIFAPPR*RRFLCC
Trigger: ACAGCACAGAAACCTTCTTCATCTTGGAGGTGCGAA...AATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR GCA 90 bp ATGTATATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATGCCTAGAGACCAGGGCTCAGAGGATTTaGGTCCATGTGTTTGTCCTT +
Preference number: 2 (lower is better)
Translates to: MYIPWYGIHRDYRPCLETRAQRI*VHVFVL
Trigger: AAGGACAAACACATGGACGCAAATCCTCTGAGCCCT...GGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR GCA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATACAACTCCACACGCCCTaGACGTTCCACACAGGCACC +
Preference number: 2 (lower is better)
Translates to: RHTLKITEMRWRGSREKIQLHTP*TFHTGT
Trigger: GGTGCCTGTGTGGAACGTGCAGGGCGTGTGGAGTTG...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp ATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGATATCCAAATTGCTTTaGTTCGAGAGAGAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: MTRFLPLIHGCDPWMLHLISKLL*FERERL
Trigger: CAGCCTCTCTCTCTCGAATCAAAGCAATTTGGATAT...CAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACATAGTCTGCAATATTaGATATTGGAGCCATGTGGA +
Preference number: 2 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTHSLQY*ILEPCG
Trigger: TCCACATGGCTCCAATATTCAATATTGCAGACTATG...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp CCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACCATTAATAAAGAAGTACCCTaGAGGGCTCAGAGGATTTGC +
Preference number: 2 (lower is better)
Translates to: PDHLLQDPIWLAITQHTINKEVP*RAQRIC
Trigger: GCAAATCCTCTGAGCCCTTCAGGGTACTTCTTTATT...AATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR GCA 90 bp TGTTTTCTTTCTAGTAAAGCAAGGGAATGTATATCCCCTGGTATGGAATTCACCGAATGTGTGCGTCGATaGGGACTCCAGGCCTCGCCG +
Preference number: 2 (lower is better)
Translates to: CFLSSKARECISPGMEFTECVRR*GLQASP
Trigger: CGGCGAGGCCTGGAGTCCGCATCGACGCACACATTC...GGTGAATTCCATACCAGGGGATATACATTCCCTTGCTTTACTAGAAAGAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp ATATTACATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCTCCCCCACCCACAGGTaGCCAACGGCTTTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: ILHSYNLQYILHADGFGSSPTHR*PTALGR
Trigger: CCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGA...GCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATGTAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGGGAGTGAGCGTGAGATaGGGCAGGAATTCTCTGATG +
Preference number: 2 (lower is better)
Translates to: HSYNLQYILHADGFGSGQGVSVR*GRNSLM
Trigger: CATCAGAGAATTCCTGCCTCATCTCACGCTCACTCC...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CCA 90 bp ACCTGCATCTTCACCACATGCACTGATGCCCCTTATCCCTTCGCACCTCCAAGATTACAAAGGTATTTGTaGCCTGTTAGCCCACATGTT +
Preference number: 2 (lower is better)
Translates to: TCIFTTCTDAPYPFAPPRLQRYL*PVSPHV
Trigger: AACATGTGGGCTAACAGGCCACAAATACCTTTGTAA...TCTTGGAGGTGCGAAGGGATAAGGGGCATCAGTGCATGTGGTGAAGATGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CCA 90 bp CCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACCATTCTACAGAATGTCACTTaGGAGTTGACACAAAACCCA +
Preference number: 2 (lower is better)
Translates to: PDHLLQDPIWLAITQHTILQNVT*ELTQNP
Trigger: TGGGTTTTGTGTCAACTCCCAAGTGACATTCTGTAG...AATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGATCTGCCATGAACAGTaGAAGACCCATCCCAAGTGG +
Preference number: 2 (lower is better)
Translates to: HSYNLQYILHADGFGSGQICHEQ*KTHPKW
Trigger: CCACTTGGGATGGGTCTTTCACTGTTCATGGCAGAT...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CCA 90 bp ACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGCGGCTGCAGTATTCTTGGCTGAGGCTGTATaGATAGTGTCATCCTTATTT +
Preference number: 2 (lower is better)
Translates to: TVHSTRRWIWKRAAAAVFLAEAV*IVSSLF
Trigger: AAATAAGGATGACACTATCCATACAGCCTCAGCCAA...GAATACTGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CCA 90 bp ACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGCGGCTGCAGTATTCCCATGTGTTTGTCCTTaGCATGTAGTTACAAAGGTA +
Preference number: 2 (lower is better)
Translates to: TVHSTRRWIWKRAAAAVFPCVCP*HVVTKV
Trigger: TACCTTTGTAACTACATGCCAAGGACAAACACATGG...GAATACTGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CCA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATACGGCTTTGGGGAGGATaGCAATGCAGTGGAGGAATA +
Preference number: 2 (lower is better)
Translates to: RHTLKITEMRWRGSREKIRLWGG*QCSGGI
Trigger: TATTCCTCCACTGCATTGCCATCCTCCCCAAAGCCG...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CCA 90 bp TGTTTTCTTTCTAGTAAAGCAAGGGAATGTATATCCCCTGGTATGGAATTCACCCAAAGACGGACGGCGTaGGACATATGCCCAGGTTGC +
Preference number: 2 (lower is better)
Translates to: CFLSSKARECISPGMEFTQRRTA*DICPGC
Trigger: GCAACCTGGGCATATGTCCCACGCCGTCCGTCTTTG...GGTGAATTCCATACCAGGGGATATACATTCCCTTGCTTTACTAGAAAGAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CCA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGGAGCAGGTGACTTACTaGCTGCAGAAACCTCAGTCT +
Preference number: 2 (lower is better)
Translates to: HSYNLQYILHADGFGSGQEQVTY*LQKPQS
Trigger: AGACTGAGGTTTCTGCAGCCAGTAAGTCACCTGCTC...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CAA 90 bp ATAAAGAAGTACCCTGAAGGGCTCAGAGGATTTGCGTCCATGTGTTaGTCCTTGGCATGTAGTTACAAAGGTATTTGTGGCCTGTTAGCC +
Preference number: 2 (lower is better)
Translates to: IKKYPEGLRGFASMC*SLACSYKGICGLLA
Trigger: GGCTAACAGGCCACAAATACCTTTGTAACTACATGCCAAGGACAAACACATGGACGCAAATCCTCTGAGCCCTTCAGGGTACTTCTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp GCTTTGGGGAGGATGGCAATGCAGTGGAGGAATAGAAATGGATACATTGTGAACAATAAAGAAGTACCCTaGAGGGCTCAGAGGATTTGC +
Preference number: 2 (lower is better)
Translates to: ALGRMAMQWRNRNGYIVNNKEVP*RAQRIC
Trigger: GCAAATCCTCTGAGCCCTTCAGGGTACTTCTTTATT...GTTCACAATGTATCCATTTCTATTCCTCCACTGCATTGCCATCCTCCCCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR GCA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATAGACTGCAGGACCAAGTaGTTGCAAACCTGCATCTTC +
Preference number: 2 (lower is better)
Translates to: RHTLKITEMRWRGSREKIDCRTK*LQTCIF
Trigger: GAAGATGCAGGTTTGCAAGCACTTGGTCCTGCAGTC...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CCA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATACAAGACACTGTACTCTaGAATGTGTGCGTCGATGCG +
Preference number: 2 (lower is better)
Translates to: RHTLKITEMRWRGSREKIQDTVL*NVCVDA
Trigger: CGCATCGACGCACACATTCCAGAGTACAGTGTCTTG...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CCA 90 bp TGTTTTCTTTCTAGTAAAGCAAGGGAATGTATATCCCCTGGTATGGAATTCACCGGTGACCAACGGCTTTaGGGAGGATGGCAATGCAGT +
Preference number: 2 (lower is better)
Translates to: CFLSSKARECISPGMEFTGDQRL*GGWQCS
Trigger: ACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACC...GGTGAATTCCATACCAGGGGATATACATTCCCTTGCTTTACTAGAAAGAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CAA 90 bp CCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGAGTaGTACTTTTCTTCCATAGTCTGCAATATTGAATATTGGAGCCAT +
Preference number: 2 (lower is better)
Translates to: PPIDPWMRSMDAPPE*YFSSIVCNIEYWSH
Trigger: ATGGCTCCAATATTCAATATTGCAGACTATGGAAGAAAAGTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp ATATTACATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGCCGGGGTCATTGGCTaGGGCTGTATGGATAGTGTC +
Preference number: 2 (lower is better)
Translates to: ILHSYNLQYILHADGFGSAGVIG*GCMDSV
Trigger: GACACTATCCATACAGCCTCAGCCAATGACCCCGGC...GCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATGTAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGCTCTCAGACGCTCAGTaGTTCAGAACTCGTTTTTGT +
Preference number: 2 (lower is better)
Translates to: HSYNLQYILHADGFGSGQLSDAQ*FRTRFC
Trigger: ACAAAAACGAGTTCTGAATCACTGAGCGTCTGAGAG...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATATTCGCACCTCCAAGATaGAGAAGGTTTCTGTGCTGT +
Preference number: 2 (lower is better)
Translates to: RHTLKITEMRWRGSREKIFAPPR*RRFLCC
Trigger: ACAGCACAGAAACCTTCTTCATCTTGGAGGTGCGAA...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CCA 90 bp ATATTACATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCCAAAGACGGACGGCGTaGGACATATGCCCAGGTTGC +
Preference number: 2 (lower is better)
Translates to: ILHSYNLQYILHADGFGSQRRTA*DICPGC
Trigger: GCAACCTGGGCATATGTCCCACGCCGTCCGTCTTTG...GCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATGTAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CAA 90 bp TATTACATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTaGGAAGCGGGCAGCGGCTGCAGTATTCAACAGAACATGACACAG +
Preference number: 2 (lower is better)
Translates to: YYILTIYSTFYTQMD*EAGSGCSIQQNMTQ
Trigger: CTGTGTCATGTTCTGTTGAATACTGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATGTAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATATGGAAAACAGACAACTaGAGAGCAGAGAGAGAGAGA +
Preference number: 2 (lower is better)
Translates to: RHTLKITEMRWRGSREKIWKTDN*RAERER
Trigger: TCTCTCTCTCTCTGCTCTTCAGTTGTCTGTTTTCCA...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp TGTTTTCTTTCTAGTAAAGCAAGGGAATGTATATCCCCTGGTATGGAATTCACCAGGCTGAAAGGTGAGTaGGAACCAATGTCTGTGTGT +
Preference number: 2 (lower is better)
Translates to: CFLSSKARECISPGMEFTRLKGE*EPMSVC
Trigger: ACACACAGACATTGGTTCTCACTCACCTTTCAGCCT...GGTGAATTCCATACCAGGGGATATACATTCCCTTGCTTTACTAGAAAGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CAA 90 bp AATGGAAAGAAATATGAGGACGTTACTGAAAGCAAAGGATTCTCATaGAAAAGGGGTGACAGCTTAATCACCCAACCAAACAAGGTAGGT +
Preference number: 2 (lower is better)
Translates to: NGKKYEDVTESKGFS*KRGDSLITQPNKVG
Trigger: ACCTACCTTGTTTGGTTGGGTGATTAAGCTGTCACCCCTTTTCAATGAGAATCCTTTGCTTTCAGTAACGTCCTCATATTTCTTTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR TCA 90 bp TGTTTTCTTTCTAGTAAAGCAAGGGAATGTATATCCCCTGGTATGGAATTCACCATATCCAAATTGCTTTaGTTCGAGAGAGAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: CFLSSKARECISPGMEFTISKLL*FERERL
Trigger: CAGCCTCTCTCTCTCGAATCAAAGCAATTTGGATAT...GGTGAATTCCATACCAGGGGATATACATTCCCTTGCTTTACTAGAAAGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR GCA 90 bp ATATTACATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCAGGGCTCAGAGGATTTaGGTCCATGTGTTTGTCCTT +
Preference number: 2 (lower is better)
Translates to: ILHSYNLQYILHADGFGSRAQRI*VHVFVL
Trigger: AAGGACAAACACATGGACGCAAATCCTCTGAGCCCT...GCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATGTAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CAA 90 bp CGCTCAGTGATTCAGAACTCGTTTTTGTTTCAAGTCTTAAAAATCTaGCCATGCATGATAAACCTCTTAAGCAAGACACTGTACTCTGGA +
Preference number: 2 (lower is better)
Translates to: RSVIQNSFLFQVLKI*PCMINLLSKTLYSG
Trigger: TCCAGAGTACAGTGTCTTGCTTAAGAGGTTTATCATGCATGGCAAGATTTTTAAGACTTGAAACAAAAACGAGTTCTGAATCACTGAGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CCA 90 bp TGTTTTCTTTCTAGTAAAGCAAGGGAATGTATATCCCCTGGTATGGAATTCACCTTGGCTGAGGCTGTATaGATAGTGTCATCCTTATTT +
Preference number: 2 (lower is better)
Translates to: CFLSSKARECISPGMEFTLAEAV*IVSSLF
Trigger: AAATAAGGATGACACTATCCATACAGCCTCAGCCAA...GGTGAATTCCATACCAGGGGATATACATTCCCTTGCTTTACTAGAAAGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 72 bp TGCCTCCCACAGCTGACGGCGGCACTGGACTGCCTGTaGTCGCGCTCACAGCAAGATGTGCTGCTCCAGTTT +
Preference number: 3 (lower is better)
Translates to: CLPQLTAALDCL*SRSQQDVLLQF
Trigger: AAACTGGAGCAGCACATCTTGCTGTGAGCGCGATCACAGGCAGTCCAGTGCCGCCGTCAGCTGTGGGAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR GCA 72 bp CTGGCCCAGCCTTTGAGAGACAATGACTCACAATCATaGCTCCCACAGCTGACGGCGGCACTGGACTGCCTG +
Preference number: 3 (lower is better)
Translates to: LAQPLRDNDSQS*LPQLTAALDCL
Trigger: CAGGCAGTCCAGTGCCGCCGTCAGCTGTGGGAGGCATGATTGTGAGTCATTGTCTCTCAAAGGCTGGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CAA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACGCTCTGGCCCAGCCTTaGAGAGACAATGACTCACAA +
Preference number: 3 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHALAQP*RDNDSQ
Trigger: TTGTGAGTCATTGTCTCTCAAAGGCTGGGCCAGAGC...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CAA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCTTTTGTCCTGCTGCTTaGTTTCTCTTCCGGGGGCAC +
Preference number: 3 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICFCPAA*FLFRGH
Trigger: GTGCCCCCGGAAGAGAAACAAAGCAGCAGGACAAAA...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 72 bp GACTCCAGGCCTCGCCGCCGAGCCGGGGTCATTGGCTaGGGCTGTATGGATAGTGTCATCCTTATTTTGTCC +
Preference number: 3 (lower is better)
Translates to: DSRPRRRAGVIG*GCMDSVILILS
Trigger: GGACAAAATAAGGATGACACTATCCATACAGCCTCAGCCAATGACCCCGGCTCGGCGGCGAGGCCTGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR GCA 72 bp AAACCTCTTAAGCAAGACACTGTACTCTGGAATGTGTaGGTCGATGCGGACTCCAGGCCTCGCCGCCGAGCC +
Preference number: 3 (lower is better)
Translates to: KPLKQDTVLWNV*VDADSRPRRRA
Trigger: GGCTCGGCGGCGAGGCCTGGAGTCCGCATCGACGCACACATTCCAGAGTACAGTGTCTTGCTTAAGAGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR GCA 72 bp TCTTCTGCCCACCACCCGCTGCCCCCGACCATCTTTTaGAGGATCCTATCTGGCTGGCAATCACCCAACACA +
Preference number: 3 (lower is better)
Translates to: SSAHHPLPPTIF*RILSGWQSPNT
Trigger: TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR GCA 72 bp AATTCAACAGCACGGCCTCTTCTGCCCACCACCCGCTaGCCCCGACCATCTTTTGCAGGATCCTATCTGGCT +
Preference number: 3 (lower is better)
Translates to: NSTARPLLPTTR*PRPSFAGSYLA
Trigger: AGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGAAGAGGCCGTGCTGTTGAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CAA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCAAGGGCTCAGAGGATTaGCGTCCATGTGTTTGTCCT +
Preference number: 3 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICKGSED*RPCVCP
Trigger: AGGACAAACACATGGACGCAAATCCTCTGAGCCCTT...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR GCA 72 bp ATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATaGCTAGAGACCAGCCTCTTCAAAGACGGACGGCGT +
Preference number: 3 (lower is better)
Translates to: IPWYGIHRDYRP*LETSLFKDGRR
Trigger: ACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CAA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACTTTGCGTCCATGTGTTaGTCCTTGGCATGTAGTTAC +
Preference number: 3 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHFASMC*SLACSY
Trigger: GTAACTACATGCCAAGGACAAACACATGGACGCAAA...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CAA 90 bp AGGTTTCTGTGCTGTCCGGTGTGTGTGAGGCTGGGCTTCCTGCTGGATCCACCAAAGGGCTCAGAGGATTaGCGTCCATGTGTTTGTCCT +
Preference number: 3 (lower is better)
Translates to: RFLCCPVCVRLGFLLDPPKGSED*RPCVCP
Trigger: AGGACAAACACATGGACGCAAATCCTCTGAGCCCTT...TGGTGGATCCAGCAGGAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CAA 90 bp CCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACCATTCACAGGCACCCCGATTaGTCTCAACAGCCTCGAGGC +
Preference number: 3 (lower is better)
Translates to: PDHLLQDPIWLAITQHTIHRHPD*SQQPRG
Trigger: GCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTG...AATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR GCA 72 bp CACTGGACTGCCTGTGATCGCGCTCACAGCAAGATGTaGTGCTCCAGTTTCGATGACACGCTTCCTCCCATT +
Preference number: 3 (lower is better)
Translates to: HWTACDRAHSKM*CSSFDDTLPPI
Trigger: AATGGGAGGAAGCGTGTCATCGAAACTGGAGCAGCACATCTTGCTGTGAGCGCGATCACAGGCAGTCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR GCA 72 bp CTGAACCTTTCGGGGCTGACTGCAGGACCAAGTGCTTaGAAACCTGCATCTTCACCACATGCACTGATGCCC +
Preference number: 3 (lower is better)
Translates to: LNLSGLTAGPSA*KPASSPHALMP
Trigger: GGGCATCAGTGCATGTGGTGAAGATGCAGGTTTGCAAGCACTTGGTCCTGCAGTCAGCCCCGAAAGGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CCA 72 bp CACATGTTCCCTTTCAGTCCTTGTCAGCCACTTCCTTaGCCTGTCCATGATCTGAGACAGCTCTGGCCCAGC +
Preference number: 3 (lower is better)
Translates to: HMFPFSPCQPLP*PVHDLRQLWPS
Trigger: GCTGGGCCAGAGCTGTCTCAGATCATGGACAGGCCAAGGAAGTGGCTGACAAGGACTGAAAGGGAACATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CAA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGTCCATGTGTTTGTCCTaGGCATGTAGTTACAAAGGT +
Preference number: 3 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVESMCLS*ACSYKG
Trigger: ACCTTTGTAACTACATGCCAAGGACAAACACATGGA...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 72 bp GCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATaGACAGTGAAAGACCCATCCCAAGTGGCCCTGTTT +
Preference number: 3 (lower is better)
Translates to: ASRPHLWTGDLP*TVKDPSQVALF
Trigger: AAACAGGGCCACTTGGGATGGGTCTTTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR GCA 72 bp TGGACTGCCTGTGATCGCGCTCACAGCAAGATGTGCTaGTCCAGTTTCGATGACACGCTTCCTCCCATTGAT +
Preference number: 3 (lower is better)
Translates to: WTACDRAHSKMC*SSFDDTLPPID
Trigger: ATCAATGGGAGGAAGCGTGTCATCGAAACTGGAGCAGCACATCTTGCTGTGAGCGCGATCACAGGCAGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CAA 90 bp CGCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCAAGTGTCATCCTTATTTaGTCCTGCTGCTTTGTTTCT +
Preference number: 3 (lower is better)
Translates to: RPARSTQAPRFVSTASRPSVILI*SCCFVS
Trigger: AGAAACAAAGCAGCAGGACAAAATAAGGATGACACT...TGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CAA 90 bp ACCTGCATCTTCACCACATGCACTGATGCCCCTTATCCCTTCGCACCTCCAAGAACACGCTTCCTCCCATaGATCCATGGATGCGATCCA +
Preference number: 3 (lower is better)
Translates to: TCIFTTCTDAPYPFAPPRTRFLP*IHGCDP
Trigger: TGGATCGCATCCATGGATCAATGGGAGGAAGCGTGT...TCTTGGAGGTGCGAAGGGATAAGGGGCATCAGTGCATGTGGTGAAGATGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CAA 90 bp AGGTTTCTGTGCTGTCCGGTGTGTGTGAGGCTGGGCTTCCTGCTGGATCCACCATCTACAGAATGTCACTaGGGAGTTGACACAAAACCC +
Preference number: 3 (lower is better)
Translates to: RFLCCPVCVRLGFLLDPPSTECH*GVDTKP
Trigger: GGGTTTTGTGTCAACTCCCAAGTGACATTCTGTAGA...TGGTGGATCCAGCAGGAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 72 bp CCAAACAAGGTAGGTAAGCTTGCGGACAGGAGCAGGTaGCTTACTGGCTGCAGAAACCTCAGTCTCAAGAGC +
Preference number: 3 (lower is better)
Translates to: PNKVGKLADRSR*LTGCRNLSLKS
Trigger: GCTCTTGAGACTGAGGTTTCTGCAGCCAGTAAGTCACCTGCTCCTGTCCGCAAGCTTACCTACCTTGTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR GCA 72 bp AGGACCAAGTGCTTGCAAACCTGCATCTTCACCACATaGACTGATGCCCCTTATCCCTTCGCACCTCCAAGA +
Preference number: 3 (lower is better)
Translates to: RTKCLQTCIFTT*TDAPYPFAPPR
Trigger: TCTTGGAGGTGCGAAGGGATAAGGGGCATCAGTGCATGTGGTGAAGATGCAGGTTTGCAAGCACTTGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR GCA 72 bp CTGGTCTTAAGCAATGCTGAACCTTTCGGGGCTGACTaGAGGACCAAGTGCTTGCAAACCTGCATCTTCACC +
Preference number: 3 (lower is better)
Translates to: LVLSNAEPFGAD*RTKCLQTCIFT
Trigger: GGTGAAGATGCAGGTTTGCAAGCACTTGGTCCTGCAGTCAGCCCCGAAAGGTTCAGCATTGCTTAAGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CAA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAAGTCTTAAAAATCTaGCCATGCATGATAAACCTC +
Preference number: 3 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWQVLKI*PCMINL
Trigger: GAGGTTTATCATGCATGGCAAGATTTTTAAGACTTG...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CAA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGAAAGAGCGTGGTTCTTaGAACCTGATTCAAATTCTA +
Preference number: 3 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWKERGS*NLIQIL
Trigger: TAGAATTTGAATCAGGTTCAAAGAACCACGCTCTTT...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CAA 90 bp ACCTGCATCTTCACCACATGCACTGATGCCCCTTATCCCTTCGCACCTCCAAGAAATGTCACTTGGGAGTaGACACAAAACCCAGGGGGA +
Preference number: 3 (lower is better)
Translates to: TCIFTTCTDAPYPFAPPRNVTWE*TQNPGG
Trigger: TCCCCCTGGGTTTTGTGTCAACTCCCAAGTGACATT...TCTTGGAGGTGCGAAGGGATAAGGGGCATCAGTGCATGTGGTGAAGATGCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CAA 90 bp ATGTATATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATGCCTAGAGACCAATGTCACTTGGGAGTaGACACAAAACCCAGGGGGA +
Preference number: 3 (lower is better)
Translates to: MYIPWYGIHRDYRPCLETNVTWE*TQNPGG
Trigger: TCCCCCTGGGTTTTGTGTCAACTCCCAAGTGACATT...GGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 72 bp CAAGGGAATGTATATCCCCTGGTATGGAATTCACCGTaGCTACCGCCCATGCCTAGAGACCAGCCTCTTCAA +
Preference number: 3 (lower is better)
Translates to: QGNVYPLVWNSP*LPPMPRDQPLQ
Trigger: TTGAAGAGGCTGGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACATTCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 72 bp CAAGTGCTTGCAAACCTGCATCTTCACCACATGCACTaGTGCCCCTTATCCCTTCGCACCTCCAAGATGAAG +
Preference number: 3 (lower is better)
Translates to: QVLANLHLHHMH*CPLSLRTSKMK
Trigger: CTTCATCTTGGAGGTGCGAAGGGATAAGGGGCATCAGTGCATGTGGTGAAGATGCAGGTTTGCAAGCACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR GCA 72 bp AATGCTGAACCTTTCGGGGCTGACTGCAGGACCAAGTaGTTGCAAACCTGCATCTTCACCACATGCACTGAT +
Preference number: 3 (lower is better)
Translates to: NAEPFGADCRTK*LQTCIFTTCTD
Trigger: ATCAGTGCATGTGGTGAAGATGCAGGTTTGCAAGCACTTGGTCCTGCAGTCAGCCCCGAAAGGTTCAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CCA 72 bp TCCAGTTTCGATGACACGCTTCCTCCCATTGATCCATaGATGCGATCCATGGATGCTCCACCTGAGTTGTAC +
Preference number: 3 (lower is better)
Translates to: SSFDDTLPPIDP*MRSMDAPPELY
Trigger: GTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATCGAAACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 72 bp GGGGGCACCGTTGCTACACATCCTGGAATTAAAGGCTaGAAGGTGAGTGAGAACCAATGTCTGTGTGTGTCT +
Preference number: 3 (lower is better)
Translates to: GGTVATHPGIKG*KVSENQCLCVS
Trigger: AGACACACACAGACATTGGTTCTCACTCACCTTTCAGCCTTTAATTCCAGGATGTGTAGCAACGGTGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 72 bp GGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTaGAAGACCCATCCCAAGTGGCCCTGTTTTCTTTCT +
Preference number: 3 (lower is better)
Translates to: GHIFGQEICHEQ*KTHPKWPCFLS
Trigger: AGAAAGAAAACAGGGCCACTTGGGATGGGTCTTTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CAA 90 bp GCTTTGGGGAGGATGGCAATGCAGTGGAGGAATAGAAATGGATACATTGTGAACGCTCTGGCCCAGCCTTaGAGAGACAATGACTCACAA +
Preference number: 3 (lower is better)
Translates to: ALGRMAMQWRNRNGYIVNALAQP*RDNDSQ
Trigger: TTGTGAGTCATTGTCTCTCAAAGGCTGGGCCAGAGC...GTTCACAATGTATCCATTTCTATTCCTCCACTGCATTGCCATCCTCCCCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR GCA 72 bp GTTTCGATGACACGCTTCCTCCCATTGATCCATGGATaGGATCCATGGATGCTCCACCTGAGTTGTACTTTT +
Preference number: 3 (lower is better)
Translates to: VSMTRFLPLIHG*DPWMLHLSCTF
Trigger: AAAAGTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATCGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR GCA 72 bp TTCTACACGCAGATGGATTTGGAAGCGGGCAGCGGCTaGAGTATTCAACAGAACATGACACAGGTAAGAATG +
Preference number: 3 (lower is better)
Translates to: FYTQMDLEAGSG*SIQQNMTQVRM
Trigger: CATTCTTACCTGTGTCATGTTCTGTTGAATACTGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CAA 90 bp TGTTTTCTTTCTAGTAAAGCAAGGGAATGTATATCCCCTGGTATGGAATTCACCGCCGAGCCGGGGTCATaGGCTGAGGCTGTATGGATA +
Preference number: 3 (lower is better)
Translates to: CFLSSKARECISPGMEFTAEPGS*AEAVWI
Trigger: TATCCATACAGCCTCAGCCAATGACCCCGGCTCGGC...GGTGAATTCCATACCAGGGGATATACATTCCCTTGCTTTACTAGAAAGAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CAA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATACTCGAGGCCACATCTTaGGACAGGAGATCTGCCATG +
Preference number: 3 (lower is better)
Translates to: RHTLKITEMRWRGSREKILEATS*DRRSAM
Trigger: CATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAG...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 72 bp ATGTATCCTTGCCCCCATCTTCATAGGCTTCATAAGTaGAGGGATTCAGGGATATCCAGAGTCATGGCTGGT +
Preference number: 3 (lower is better)
Translates to: MYPCPHLHRLHK*RDSGISRVMAG
Trigger: ACCAGCCATGACTCTGGATATCCCTGAATCCCTTCACTTATGAAGCCTATGAAGATGGGGGCAAGGATACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CAA 90 bp AAACCTCTTAAGCAAGACACTGTACTCTGGAATGTGTGCGTCGATGCGGACTCCAGTGTCATCCTTATTTaGTCCTGCTGCTTTGTTTCT +
Preference number: 3 (lower is better)
Translates to: KPLKQDTVLWNVCVDADSSVILI*SCCFVS
Trigger: AGAAACAAAGCAGCAGGACAAAATAAGGATGACACT...GGAGTCCGCATCGACGCACACATTCCAGAGTACAGTGTCTTGCTTAAGAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CCA 72 bp TTACAATCTACAGTACATTCTACACGCAGATGGATTTaGAAGCGGGCAGCGGCTGCAGTATTCAACAGAACA +
Preference number: 3 (lower is better)
Translates to: LQSTVHSTRRWI*KRAAAAVFNRT
Trigger: TGTTCTGTTGAATACTGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CCA 72 bp ACATTCTTACAATCTACAGTACATTCTACACGCAGATaGATTTGGAAGCGGGCAGCGGCTGCAGTATTCAAC +
Preference number: 3 (lower is better)
Translates to: TFLQSTVHSTRR*IWKRAAAAVFN
Trigger: GTTGAATACTGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CAA 90 bp TGTTTTCTTTCTAGTAAAGCAAGGGAATGTATATCCCCTGGTATGGAATTCACCTTTTGTCCTGCTGCTTaGTTTCTCTTCCGGGGGCAC +
Preference number: 3 (lower is better)
Translates to: CFLSSKARECISPGMEFTFCPAA*FLFRGH
Trigger: GTGCCCCCGGAAGAGAAACAAAGCAGCAGGACAAAA...GGTGAATTCCATACCAGGGGATATACATTCCCTTGCTTTACTAGAAAGAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 72 bp TGGAGCCATGTGGATTTTACAATATCCAAATTGCTTTaGTTCGAGAGAGAGAGGCTGTTCTTTCCTGGACGC +
Preference number: 3 (lower is better)
Translates to: WSHVDFTISKLL*FERERLFFPGR
Trigger: GCGTCCAGGAAAGAACAGCCTCTCTCTCTCGAATCAAAGCAATTTGGATATTGTAAAATCCACATGGCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 72 bp GCAGGGGAGAGGGCTAAGGTTGGGAGGGTAAACTGGTaGAATTTACACACACATGATCTAAAGAGAATTCAA +
Preference number: 3 (lower is better)
Translates to: AGERAKVGRVNW*NLHTHDLKRIQ
Trigger: TTGAATTCTCTTTAGATCATGTGTGTGTAAATTTCACCAGTTTACCCTCCCAACCTTAGCCCTCTCCCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CAA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGTCCATGTGTTTGTCCTaGGCATGTAGTTACAAAGGT +
Preference number: 3 (lower is better)
Translates to: HSYNLQYILHADGFGSGQSMCLS*ACSYKG
Trigger: ACCTTTGTAACTACATGCCAAGGACAAACACATGGA...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR-3UTR CAA 90 bp ATATTACATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCACACGCTTCCTCCCATaGATCCATGGATGCGATCCA +
Preference number: 3 (lower is better)
Translates to: ILHSYNLQYILHADGFGSTRFLP*IHGCDP
Trigger: TGGATCGCATCCATGGATCAATGGGAGGAAGCGTGT...GCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATGTAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR TCA 72 bp TGGAGGAATAGAAATGGATACATTGTGAACTTGATATaGATCAAAAGAGCGTGGTTCTTTGAACCTGATTCA +
Preference number: 3 (lower is better)
Translates to: WRNRNGYIVNLI*IKRAWFFEPDS
Trigger: TGAATCAGGTTCAAAGAACCACGCTCTTTTGATTCATATCAAGTTCACAATGTATCCATTTCTATTCCTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACCAGCTGCTCCCGGGCTaGCTAGCGGGCGCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHQLLPG*LAGAGA
Trigger: TGCGCCAGCGCCCGCTAGCCAGCCCGGGAGCAGCTG...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR GCA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACGCTGGTACTGCAGGGTaGAGCCGCGGCCCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHAGTAG*SRGPSA
Trigger: AGCGGAGGGGCCGCGGCTGCACCCTGCAGTACCAGC...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp ATGTGTGCGTCGATGCGGACTCCAGGCCTCGCCGCCGAGCCGGGGTCATTGGCTAGGATCTGTCCGCCTTaGAGCTTGGCGATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: MCASMRTPGLAAEPGSLARICPP*SLAILG
Trigger: GCCCAGGATCGCCAAGCTGCAAGGCGGACAGATCCT...AGCCAATGACCCCGGCTCGGCGGCGAGGCCTGGAGTCCGCATCGACGCACACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCAAGAGTGGCCCCCGGTaGCCCAAGGAGGGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICKSGPR*PKEGRL
Trigger: GAGGCGCCCCTCCTTGGGCCACCGGGGGCCACTCTT...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR GCA 90 bp ATGTGTGCGTCGATGCGGACTCCAGGCCTCGCCGCCGAGCCGGGGTCATTGGCTGTCATCCCAAGCTCCTaGCCCATCAGGATCTGTCCG +
Preference number: 4 (lower is better)
Translates to: MCASMRTPGLAAEPGSLAVIPSS*PIRICP
Trigger: CGGACAGATCCTGATGGGGCAGGAGCTTGGGATGAC...AGCCAATGACCCCGGCTCGGCGGCGAGGCCTGGAGTCCGCATCGACGCACACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp ATGTGTGCGTCGATGCGGACTCCAGGCCTCGCCGCCGAGCCGGGGTCATTGGCTCTTCCTGGGCTGAGCTaGAAGGAGAGTGACAGCCCT +
Preference number: 4 (lower is better)
Translates to: MCASMRTPGLAAEPGSLALPGLS*KESDSP
Trigger: AGGGCTGTCACTCTCCTTGCAGCTCAGCCCAGGAAG...AGCCAATGACCCCGGCTCGGCGGCGAGGCCTGGAGTCCGCATCGACGCACACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CGCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACGGCAGGCCTCCTGCTaGAGACGATGGGCACTCTCC +
Preference number: 4 (lower is better)
Translates to: RPARSTQAPRFVSTASRPRQASC*RRWALS
Trigger: GGAGAGTGCCCATCGTCTCCAGCAGGAGGCCTGCCG...TGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp ATGTGTGCGTCGATGCGGACTCCAGGCCTCGCCGCCGAGCCGGGGTCATTGGCTAGCGAGGATGGTGTCTaGCAGAGGAGACAGGATCTG +
Preference number: 4 (lower is better)
Translates to: MCASMRTPGLAAEPGSLASEDGV*QRRQDL
Trigger: CAGATCCTGTCTCCTCTGTCAGACACCATCCTCGCT...AGCCAATGACCCCGGCTCGGCGGCGAGGCCTGGAGTCCGCATCGACGCACACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp ATGTGTGCGTCGATGCGGACTCCAGGCCTCGCCGCCGAGCCGGGGTCATTGGCTGCACCTGTTCTCAAGTaGACGTCACAGGCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: MCASMRTPGLAAEPGSLAAPVLK*TSQAPL
Trigger: AAGCGGAGCCTGTGACGTGCACTTGAGAACAGGTGC...AGCCAATGACCCCGGCTCGGCGGCGAGGCCTGGAGTCCGCATCGACGCACACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR GCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGACCGGCGACCAGTGGTaGCACAGCGTCCCCATCTCA +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVETGDQW*HSVPIS
Trigger: TGAGATGGGGACGCTGTGGCACCACTGGTCGCCGGT...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR CCA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGGGAAGCCGGCAGGAGTaGGGGAGCCTGCCTATGTTC +
Preference number: 4 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWGSRQE*GSLPMF
Trigger: GAACATAGGCAGGCTCCCCCACTCCTGCCGGCTTCC...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR TCA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCGCTTCTCTGCCCAGTaGCTACCTGGTGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWRFSAQ*LPGGVR
Trigger: TCTCACCCCACCAGGTAGTCACTGGGCAGAGAAGCG...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR GCA 90 bp ATGTGTGCGTCGATGCGGACTCCAGGCCTCGCCGCCGAGCCGGGGTCATTGGCTTCGCTGGGGATGGTCTaGAAGTGGCTGTTGTCATCT +
Preference number: 4 (lower is better)
Translates to: MCASMRTPGLAAEPGSLASLGMV*KWLLSS
Trigger: AGATGACAACAGCCACTTGCAGACCATCCCCAGCGA...AGCCAATGACCCCGGCTCGGCGGCGAGGCCTGGAGTCCGCATCGACGCACACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACCAACTCCACACGCCCTaGACGTTCCACACAGGCACC +
Preference number: 4 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHQLHTP*TFHTGT
Trigger: GGTGCCTGTGTGGAACGTGCAGGGCGTGTGGAGTTG...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACAGCACGGCCTCTTCTaGCCACCACCCGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTQHGLF*PPPAAP
Trigger: GGGGGCAGCGGGTGGTGGGCAGAAGAGGCCGTGCTG...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp ATGTGTGCGTCGATGCGGACTCCAGGCCTCGCCGCCGAGCCGGGGTCATTGGCTGAAGCGGGCAGCGGCTaGAGTATTCAACAGAACATG +
Preference number: 4 (lower is better)
Translates to: MCASMRTPGLAAEPGSLAEAGSG*SIQQNM
Trigger: CATGTTCTGTTGAATACTGCAGCCGCTGCCCGCTTC...AGCCAATGACCCCGGCTCGGCGGCGAGGCCTGGAGTCCGCATCGACGCACACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACTCCTGGGGCACCACTTaGTCGATGGAGAAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHSWGTT*SMEKGP
Trigger: CGGGCCTTTCTCCATCGAGCAAGTGGTGCCCCAGGA...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR CCA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCTCCCTGTGGCTAGGTTaGTGGACTCCTCCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICSLWLG*WTPPQG
Trigger: CCCCTGGGGAGGAGTCCACCAACCTAGCCACAGGGA...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CCA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGGGGAAGTGCCCTGGCTaGTGGAGGTGCTTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWGKCPG*WRCFPF
Trigger: GAAAGGGAAGCACCTCCACCAGCCAGGGCACTTCCC...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CCA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCCAGACGGGCACATCCTaGAGACCCGGAGCGCAGATC +
Preference number: 4 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICQTGTS*RPGAQI
Trigger: GATCTGCGCTCCGGGTCTCCAGGATGTGCCCGTCTG...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR TCA 90 bp ATGTGTGCGTCGATGCGGACTCCAGGCCTCGCCGCCGAGCCGGGGTCATTGGCTCATTTATCAGCTCCGTaGTGTCCACTTGCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: MCASMRTPGLAAEPGSLAHLSAP*CPLASL
Trigger: CAGACTGGCAAGTGGACATCACGGAGCTGATAAATG...AGCCAATGACCCCGGCTCGGCGGCGAGGCCTGGAGTCCGCATCGACGCACACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCCCGGGAGTTATGTCCTaGTCACCCCGCTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICPGVMS*SPRFSA
Trigger: GGCAGAGAAGCGGGGTGAGCAGGACATAACTCCCGG...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR GCA 90 bp CGCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACCTGGCTGGTGGAGGTaGTTCCCTTTCCTCCCCTTA +
Preference number: 4 (lower is better)
Translates to: RPARSTQAPRFVSTASRPPGWWR*FPFLPL
Trigger: TAAGGGGAGGAAAGGGAAGCACCTCCACCAGCCAGG...TGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR GCA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACCCCGGCAGGCCTCCTaGTGGAGACGATGGGCACTC +
Preference number: 4 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTPRQAS*WRRWAL
Trigger: GAGTGCCCATCGTCTCCAGCAGGAGGCCTGCCGGGG...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCAGCCCTGTCACCAGCTaGACCCCGAGGTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICSPVTS*TPRSVM
Trigger: CATCACAGACCTCGGGGTGCAGCTGGTGACAGGGCT...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGCTGCCCCTGTGTGTCTaGTGTCACTGGTGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVELPLCV*CHWCWG
Trigger: ACCCCAACACCAGTGACAGCAGACACACAGGGGCAG...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp AGGTTTCTGTGCTGTCCGGTGTGTGTGAGGCTGGGCTTCCTGCTGGATCCACCAGAATGTGTGCGTCGATaGGGACTCCAGGCCTCGCCG +
Preference number: 4 (lower is better)
Translates to: RFLCCPVCVRLGFLLDPPECVRR*GLQASP
Trigger: CGGCGAGGCCTGGAGTCCGCATCGACGCACACATTC...TGGTGGATCCAGCAGGAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACCTGTCCGGATCCCATTaGTTCTCCTCGCGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHLSGSH*FSSRLP
Trigger: GGGAAGACGCGAGGAGAAGCAATGGGATCCGGACAG...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR CCA 90 bp ATGCCTCCCACAGCTGACGGCGGCACTGGACTGCCTGTGATCGCGCTCACAGCACTGCCCTTAGGTGAGTaGAGCTGTGTCCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: MPPTADGGTGLPVIALTALPLGE*SCVPQS
Trigger: ACTCTGAGGGACACAGCTCCACTCACCTAAGGGCAG...TGCTGTGAGCGCGATCACAGGCAGTCCAGTGCCGCCGTCAGCTGTGGGAGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGTTCCTGGGGTCCCTGTaGCTAGGTTGGTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVEFLGSL*LGWWTP
Trigger: AGGAGTCCACCAACCTAGCCACAGGGACCCCAGGAA...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CCA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACTGGGGGAGGAGGTCCTaGTATGGAGCAGACATTGGG +
Preference number: 4 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHWGRRS*YGADIG
Trigger: CCCAATGTCTGCTCCATACCAGGACCTCCTCCCCCA...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CCA 90 bp ATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGCTTCCCGCCAGTCCATaGCCAGGCCGGGAGGCGACG +
Preference number: 4 (lower is better)
Translates to: MTRFLPLIHGCDPWMLHLLPASP*PGREAT
Trigger: CGTCGCCTCCCGGCCTGGCCATGGACTGGCGGGAAG...CAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR TCA 90 bp CGCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACCTCCATGCCAGCGCTaGTGGGAAGAAGCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: RPARSTQAPRFVSTASRPPPCQR*WEEASS
Trigger: TGAACTTGCTTCTTCCCATCAGCGCTGGCATGGAGG...TGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR TCA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACCACAGGGGTGGATTCTaGGGCCTGTCCTGCAGAATT +
Preference number: 4 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHHRGGF*GLSCRI
Trigger: AATTCTGCAGGACAGGCCTCAGAATCCACCCCTGTG...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR TCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGAGCGAGGATGGTGTCTaGCAGAGGAGACAGGATCTG +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVESEDGV*QRRQDL
Trigger: CAGATCCTGTCTCCTCTGTCAGACACCATCCTCGCT...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp GATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGACCGCGCGGGCTCCTaGGTTGCTCTCCGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: DDTLPPIDPWMRSMDAPPDRAGS*VALRSP
Trigger: TGGACTCCGGAGAGCAACTCAGGAGCCCGCGCGGTC...AGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR GCA 90 bp GATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTCCCCGGCAGGCCTCCTaGTGGAGACGATGGGCACTC +
Preference number: 4 (lower is better)
Translates to: DDTLPPIDPWMRSMDAPPPRQAS*WRRWAL
Trigger: GAGTGCCCATCGTCTCCAGCAGGAGGCCTGCCGGGG...AGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp GTTTCGATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCGCTGGTACTGCAGGGTaGAGCCGCGGCCCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: VSMTRFLPLIHGCDPWMLAGTAG*SRGPSA
Trigger: AGCGGAGGGGCCGCGGCTGCACCCTGCAGTACCAGC...GAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATCGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp ATGCCTCCCACAGCTGACGGCGGCACTGGACTGCCTGTGATCGCGCTCACAGCACCAGCAACTGATGGCTaGTTCCTGTTTTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: MPPTADGGTGLPVIALTAPATDG*FLFWPL
Trigger: CAGAGGCCAAAACAGGAAGCAGCCATCAGTTGCTGG...TGCTGTGAGCGCGATCACAGGCAGTCCAGTGCCGCCGTCAGCTGTGGGAGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACCCTTTCGGGGCTGACTaGAGGACCAAGTGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHPFGAD*RTKCLQ
Trigger: TTGCAAGCACTTGGTCCTGCAGTCAGCCCCGAAAGG...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACCCCCCGACCATCTTTTaGAGGATCCTATCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHPPTIF*RILSGW
Trigger: CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGG...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp AAACCTCTTAAGCAAGACACTGTACTCTGGAATGTGTGCGTCGATGCGGACTCCGCAGCCCGGGCGCCCTaGTCCCTCTTCCCGCCAGTC +
Preference number: 4 (lower is better)
Translates to: KPLKQDTVLWNVCVDADSAARAP*SLFPPV
Trigger: GACTGGCGGGAAGAGGGAGCAGGGCGCCCGGGCTGC...GGAGTCCGCATCGACGCACACATTCCAGAGTACAGTGTCTTGCTTAAGAGGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR CCA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACTCACGATGGAGTTCCTaGTGGGGTACTCGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHSRWSS*WGTRRL
Trigger: CAGACGACGAGTACCCCACCAGGAACTCCATCGTGA...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACGAGGCTGTTCTTTCCTaGACGCTCTCAGACGCTCAG +
Preference number: 4 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHEAVLS*TLSDAQ
Trigger: CTGAGCGTCTGAGAGCGTCCAGGAAAGAACAGCCTC...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCGACCTTCCGTCACTTTaGAAAACAGGGCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICDLPSL*KTGRPG
Trigger: GCCTGGCCGCCCTGTTTTCCAAAGTGACGGAAGGTC...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
3UTR CAA 72 bp CCACACGCCCTGCACGTTCCACACAGGCACCCCGATTaGTCTCAACAGCCTCGAGGCCACATCTTTGGACAG +
Preference number: 4 (lower is better)
Translates to: PHALHVPHRHPD*SQQPRGHIFGQ
Trigger: CTGTCCAAAGATGTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGCGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CAA 72 bp CTCTTCTGCCCACCACCCGCTGCCCCCGACCATCTTTaGCAGGATCCTATCTGGCTGGCAATCACCCAACAC +
Preference number: 4 (lower is better)
Translates to: LFCPPPAAPDHL*QDPIWLAITQH
Trigger: GTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGCCCTGTCAATGGCAGTaGTTTGCTCATCTTGCGAGG +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVEPCQWQ*FAHLAR
Trigger: CCTCGCAAGATGAGCAAATCACTGCCATTGACAGGG...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp AGGTTTCTGTGCTGTCCGGTGTGTGTGAGGCTGGGCTTCCTGCTGGATCCACCAGCCGGGGTCATTGGCTaGGGCTGTATGGATAGTGTC +
Preference number: 4 (lower is better)
Translates to: RFLCCPVCVRLGFLLDPPAGVIG*GCMDSV
Trigger: GACACTATCCATACAGCCTCAGCCAATGACCCCGGC...TGGTGGATCCAGCAGGAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp AGGTTTCTGTGCTGTCCGGTGTGTGTGAGGCTGGGCTTCCTGCTGGATCCACCAGCACTGGACTGCCTGTaGTCGCGCTCACAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: RFLCCPVCVRLGFLLDPPALDCL*SRSQQD
Trigger: ATCTTGCTGTGAGCGCGATCACAGGCAGTCCAGTGC...TGGTGGATCCAGCAGGAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAACATGCCTCCCACAGCTaGCGGCGGCACTGGACTGCC +
Preference number: 4 (lower is better)
Translates to: LNSLEATSLDRRSAMNSEHASHS*RRHWTA
Trigger: GGCAGTCCAGTGCCGCCGTCAGCTGTGGGAGGCATG...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CGCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCAGAGGCAGGAATTCTCTaGTGTATCCTTGCCCCCATC +
Preference number: 4 (lower is better)
Translates to: RPARSTQAPRFVSTASRPEAGIL*CILAPI
Trigger: GATGGGGGCAAGGATACATCAGAGAATTCCTGCCTC...TGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGGGAGTGAGCGTGAGATaGGGCAGGAATTCTCTGATG +
Preference number: 4 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWGVSVR*GRNSLM
Trigger: CATCAGAGAATTCCTGCCTCATCTCACGCTCACTCC...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp AGGTTTCTGTGCTGTCCGGTGTGTGTGAGGCTGGGCTTCCTGCTGGATCCACCACCACATCGATCTGCATaGCCTCGTAGGAGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: RFLCCPVCVRLGFLLDPPPHRSA*PRRRRH
Trigger: ATGGCGCCTCCTACGAGGTCATGCAGATCGATGTGG...TGGTGGATCCAGCAGGAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR GCA 90 bp CGCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCATGTGTCCTGTCTTGCTaGTCACTCCCTCATTCTGCC +
Preference number: 4 (lower is better)
Translates to: RPARSTQAPRFVSTASRPCVLSC*SLPHSA
Trigger: GGCAGAATGAGGGAGTGAGCAGCAAGACAGGACACA...TGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR GCA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCCAGCAACTGATGGCTaGTTCCTGTTTTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWPATDG*FLFWPL
Trigger: CAGAGGCCAAAACAGGAAGCAGCCATCAGTTGCTGG...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp AGGTTTCTGTGCTGTCCGGTGTGTGTGAGGCTGGGCTTCCTGCTGGATCCACCACTGCCCCTGTGTGTCTaGTGTCACTGGTGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: RFLCCPVCVRLGFLLDPPLPLCV*CHWCWG
Trigger: ACCCCAACACCAGTGACAGCAGACACACAGGGGCAG...TGGTGGATCCAGCAGGAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACGCTCAGCCCTTTGGATaGCTGCATAAGGTCATTCCC +
Preference number: 4 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHAQPFG*LHKVIP
Trigger: GGGAATGACCTTATGCAGGCATCCAAAGGGCTGAGC...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp ATGCCTCCCACAGCTGACGGCGGCACTGGACTGCCTGTGATCGCGCTCACAGCAGCTCACAGCAAGATGTaGTGCTCCAGTTTCGATGAC +
Preference number: 4 (lower is better)
Translates to: MPPTADGGTGLPVIALTAAHSKM*CSSFDD
Trigger: GTCATCGAAACTGGAGCAGCACATCTTGCTGTGAGC...TGCTGTGAGCGCGATCACAGGCAGTCCAGTGCCGCCGTCAGCTGTGGGAGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp CGCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCAGAAGCGGGCAGCGGCTaGAGTATTCAACAGAACATG +
Preference number: 4 (lower is better)
Translates to: RPARSTQAPRFVSTASRPEAGSG*SIQQNM
Trigger: CATGTTCTGTTGAATACTGCAGCCGCTGCCCGCTTC...TGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGGAGGAGGTCCTGGTATaGAGCAGACATTGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVEEEVLV*SRHWVL
Trigger: CAACACCCAATGTCTGCTCCATACCAGGACCTCCTC...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGACAGGATCTGAATGGTaGTCATCCCAAGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVETGSEW*SSQAPA
Trigger: GGCAGGAGCTTGGGATGACCACCATTCAGATCCTGT...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGTCTTCTTCTGCAGGATaGACCTGTCTGTCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWSSSAG*TCLSWC
Trigger: GCACCACGACAGACAGGTCCATCCTGCAGAAGAAGA...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACTCTTCTTCTGCAGGATaGACCTGTCTGTCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHSSSAG*TCLSWC
Trigger: GCACCACGACAGACAGGTCCATCCTGCAGAAGAAGA...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCTCACGATGGAGTTCCTaGTGGGGTACTCGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICSRWSS*WGTRRL
Trigger: CAGACGACGAGTACCCCACCAGGAACTCCATCGTGA...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGCCAGGGTCCAGATCCTaGCAGACCCACTTAATGTCA +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVEPGSRS*QTHLMS
Trigger: TGACATTAAGTGGGTCTGCCAGGATCTGGACCCTGG...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp AGGTTTCTGTGCTGTCCGGTGTGTGTGAGGCTGGGCTTCCTGCTGGATCCACCACAAAGACGGACGGCGTaGGACATATGCCCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: RFLCCPVCVRLGFLLDPPQRRTA*DICPGC
Trigger: GCAACCTGGGCATATGTCCCACGCCGTCCGTCTTTG...TGGTGGATCCAGCAGGAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp AGGTTTCTGTGCTGTCCGGTGTGTGTGAGGCTGGGCTTCCTGCTGGATCCACCAGGCTGGGCTTCCTGCTaGATCCACCACTTTCACACC +
Preference number: 4 (lower is better)
Translates to: RFLCCPVCVRLGFLLDPPGWASC*IHHFHT
Trigger: GGTGTGAAAGTGGTGGATCCAGCAGGAAGCCCAGCC...TGGTGGATCCAGCAGGAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp AGGTTTCTGTGCTGTCCGGTGTGTGTGAGGCTGGGCTTCCTGCTGGATCCACCAACACGCAGATGGATTTaGAAGCGGGCAGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RFLCCPVCVRLGFLLDPPTRRWI*KRAAAA
Trigger: TGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGT...TGGTGGATCCAGCAGGAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ACCTGCATCTTCACCACATGCACTGATGCCCCTTATCCCTTCGCACCTCCAAGATACCCGAGCGAAGAGTaGCCCCCGGTGGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: TCIFTTCTDAPYPFAPPRYPSEE*PPVAQG
Trigger: TCCTTGGGCCACCGGGGGCCACTCTTCGCTCGGGTA...TCTTGGAGGTGCGAAGGGATAAGGGGCATCAGTGCATGTGGTGAAGATGCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR TCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGCATTTATCAGCTCCGTaGTGTCCACTTGCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVEHLSAP*CPLASL
Trigger: CAGACTGGCAAGTGGACATCACGGAGCTGATAAATG...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp ACAGCAAGATGTGCTGCTCCAGTTTCGATGACACGCTTCCTCCCATTGATCCATCATGCCTCCCACAGCTaGCGGCGGCACTGGACTGCC +
Preference number: 4 (lower is better)
Translates to: TARCAAPVSMTRFLPLIHHASHS*RRHWTA
Trigger: GGCAGTCCAGTGCCGCCGTCAGCTGTGGGAGGCATG...ATGGATCAATGGGAGGAAGCGTGTCATCGAAACTGGAGCAGCACATCTTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CGCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCAGCCTTTGAGAGACAATaGCTCACAATCATGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RPARSTQAPRFVSTASRPAFERQ*LTIMPP
Trigger: GGGAGGCATGATTGTGAGTCATTGTCTCTCAAAGGC...TGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACCATTTCCCCCACCCACAGGTaGCCAACGGCTTTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PDHLLQDPIWLAITQHTISPTHR*PTALGR
Trigger: CCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGA...AATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACAAGCCCTGTCACCAGCTaGACCCCGAGGTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTSPVTS*TPRSVM
Trigger: CATCACAGACCTCGGGGTGCAGCTGGTGACAGGGCT...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp ATGCCTCCCACAGCTGACGGCGGCACTGGACTGCCTGTGATCGCGCTCACAGCATCAATGGCAGTGATTTaGTCATCTTGCGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: MPPTADGGTGLPVIALTASMAVI*SSCEEA
Trigger: TGCCTCCTCGCAAGATGAGCAAATCACTGCCATTGA...TGCTGTGAGCGCGATCACAGGCAGTCCAGTGCCGCCGTCAGCTGTGGGAGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCAGTTGTGCAGCTCTTTaGAGTCCCCAGGGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICSCAAL*SPQGPD
Trigger: ATCTGGACCCTGGGGACTGCAAAGAGCTGCACAACT...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp GATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGAATGTGTGCGTCGATaGGGACTCCAGGCCTCGCCG +
Preference number: 4 (lower is better)
Translates to: DDTLPPIDPWMRSMDAPPECVRR*GLQASP
Trigger: CGGCGAGGCCTGGAGTCCGCATCGACGCACACATTC...AGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp CGCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCATGCATCTTCACCACATaGACTGATGCCCCTTATCCC +
Preference number: 4 (lower is better)
Translates to: RPARSTQAPRFVSTASRPCIFTT*TDAPYP
Trigger: GGGATAAGGGGCATCAGTGCATGTGGTGAAGATGCA...TGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGGCAGGACCAAGTGCTTaGAAACCTGCATCTTCACCA +
Preference number: 4 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWAGPSA*KPASSP
Trigger: TGGTGAAGATGCAGGTTTGCAAGCACTTGGTCCTGC...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp CTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGAGTTGTACTTTTCAGCACGGCCTCTTCTaGCCACCACCCGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: LPLIHGCDPWMLHLSCTFQHGLF*PPPAAP
Trigger: GGGGGCAGCGGGTGGTGGGCAGAAGAGGCCGTGCTG...AAAAGTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp AGGTTTCTGTGCTGTCCGGTGTGTGTGAGGCTGGGCTTCCTGCTGGATCCACCACCTAGAGGGGCTCGATaGGACTTCACAGAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: RFLCCPVCVRLGFLLDPPPRGAR*DFTEVA
Trigger: GGCAACTTCTGTGAAGTCCCATCGAGCCCCTCTAGG...TGGTGGATCCAGCAGGAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGGAGACAGGATCTGAATaGTGGTCATCCCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVEETGSE*WSSQAP
Trigger: AGGAGCTTGGGATGACCACCATTCAGATCCTGTCTC...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGTGGGGTCTTGGTGGATaGAGACTACCTTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVEWGLGG*RLPSHP
Trigger: TGGATGAGAAGGTAGTCTCCATCCACCAAGACCCCA...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACTGGGGTCTTGGTGGATaGAGACTACCTTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHWGLGG*RLPSHP
Trigger: TGGATGAGAAGGTAGTCTCCATCCACCAAGACCCCA...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGTGTCAGCCACTTCCTTaGCCTGTCCATGATCTGAGA +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVECQPLP*PVHDLR
Trigger: TCTCAGATCATGGACAGGCCAAGGAAGTGGCTGACA...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp AGGTTTCTGTGCTGTCCGGTGTGTGTGAGGCTGGGCTTCCTGCTGGATCCACCAGGTGACCAACGGCTTTaGGGAGGATGGCAATGCAGT +
Preference number: 4 (lower is better)
Translates to: RFLCCPVCVRLGFLLDPPGDQRL*GGWQCS
Trigger: ACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACC...TGGTGGATCCAGCAGGAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGAGGATCCTATCTGGCTaGCAATCACCCAACACACCA +
Preference number: 4 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWRILSG*QSPNTP
Trigger: TGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCT...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp AGGTTTCTGTGCTGTCCGGTGTGTGTGAGGCTGGGCTTCCTGCTGGATCCACCATCACGGGGAGGTAGGTaGGCAGCAAGGAAAACCTCT +
Preference number: 4 (lower is better)
Translates to: RFLCCPVCVRLGFLLDPPSRGGR*AARKTS
Trigger: AGAGGTTTTCCTTGCTGCCCACCTACCTCCCCGTGA...TGGTGGATCCAGCAGGAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR CCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGGGTAGCATTAAATCCTaGGGCACCACTTGCTCGATG +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVEGSIKS*GTTCSM
Trigger: CATCGAGCAAGTGGTGCCCCAGGATTTAATGCTACC...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR CCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGGGCTCACATAGATCTTaGACACTCCCAAGTCAGACG +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVEGSHRS*TLPSQT
Trigger: CGTCTGACTTGGGAGTGTCCAAGATCTATGTGAGCC...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422113.7
3UTR CAA 72 bp ATGCGGACTCCAGGCCTCGCCGCCGAGCCGGGGTCATaGGCTGAGGCTGTATGGATAGTGTCATCCTTATTT +
Preference number: 4 (lower is better)
Translates to: MRTPGLAAEPGS*AEAVWIVSSLF
Trigger: AAATAAGGATGACACTATCCATACAGCCTCAGCCAATGACCCCGGCTCGGCGGCGAGGCCTGGAGTCCGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp ATGTATATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATGCCTAGAGACCGCACGGGGTGGATTCTaGGGCCCGTCCTGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: MYIPWYGIHRDYRPCLETARGGF*GPSCRV
Trigger: AACTCTGCAGGACGGGCCTCAGAATCCACCCCGTGC...GGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR TCA 90 bp ATGTGTGCGTCGATGCGGACTCCAGGCCTCGCCGCCGAGCCGGGGTCATTGGCTTTTGGGAGTTTGTGCTaGGGAGATATTTACTTTCCT +
Preference number: 4 (lower is better)
Translates to: MCASMRTPGLAAEPGSLAFGSLC*GDIYFP
Trigger: AGGAAAGTAAATATCTCCTCAGCACAAACTCCCAAA...AGCCAATGACCCCGGCTCGGCGGCGAGGCCTGGAGTCCGCATCGACGCACACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp GTTTCGATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCGGGGTACTCGTCGTCTaGGGAGACGGCGGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: VSMTRFLPLIHGCDPWMLGVLVV*GDGGEG
Trigger: ACCTTCACCGCCGTCTCCTCAGACGACGAGTACCCC...GAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATCGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACCATTGGGGTACTCGTCGTCTaGGGAGACGGCGGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: PDHLLQDPIWLAITQHTIGVLVV*GDGGEG
Trigger: ACCTTCACCGCCGTCTCCTCAGACGACGAGTACCCC...AATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp ATGCCTCCCACAGCTGACGGCGGCACTGGACTGCCTGTGATCGCGCTCACAGCACTCTCAGACGCTCAGTaGTTCAGAACTCGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: MPPTADGGTGLPVIALTALSDAQ*FRTRFC
Trigger: ACAAAAACGAGTTCTGAATCACTGAGCGTCTGAGAG...TGCTGTGAGCGCGATCACAGGCAGTCCAGTGCCGCCGTCAGCTGTGGGAGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp AAACCTCTTAAGCAAGACACTGTACTCTGGAATGTGTGCGTCGATGCGGACTCCTCCCCCACCCACAGGTaGCCAACGGCTTTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: KPLKQDTVLWNVCVDADSSPTHR*PTALGR
Trigger: CCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGA...GGAGTCCGCATCGACGCACACATTCCAGAGTACAGTGTCTTGCTTAAGAGGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCACAGGAGATCTGCCATaGACAGTGAAAGACCCATCC +
Preference number: 4 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICTGDLP*TVKDPS
Trigger: GGATGGGTCTTTCACTGTTCATGGCAGATCTCCTGT...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp ATGCCTCCCACAGCTGACGGCGGCACTGGACTGCCTGTGATCGCGCTCACAGCATCAAAATTACAGAGATaGGATGGAGAGGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: MPPTADGGTGLPVIALTASKLQR*DGEEAG
Trigger: CCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGA...TGCTGTGAGCGCGATCACAGGCAGTCCAGTGCCGCCGTCAGCTGTGGGAGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACAGCGGACAGGAGCAGGTaGCTTACTGGCTGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTADRSR*LTGCRN
Trigger: GTTTCTGCAGCCAGTAAGTCACCTGCTCCTGTCCGC...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CGCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACTCATTGAAAAGGGGTaGCAGCTTAATCACCCAACC +
Preference number: 4 (lower is better)
Translates to: RPARSTQAPRFVSTASRPLIEKG*QLNHPT
Trigger: GGTTGGGTGATTAAGCTGTCACCCCTTTTCAATGAG...TGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACAGTCATCCCAAGCTCCTaGCCCATCAGGATCTGTCCG +
Preference number: 4 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTVIPSS*PIRICP
Trigger: CGGACAGATCCTGATGGGGCAGGAGCTTGGGATGAC...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp AGGTTTCTGTGCTGTCCGGTGTGTGTGAGGCTGGGCTTCCTGCTGGATCCACCACATCCATTTCCCCATTaGTTCTGGGGAGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: RFLCCPVCVRLGFLLDPPHPFPH*FWGGPP
Trigger: AGGTGGACCTCCCCAGAAGCAATGGGGAAATGGATG...TGGTGGATCCAGCAGGAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp AGGTTTCTGTGCTGTCCGGTGTGTGTGAGGCTGGGCTTCCTGCTGGATCCACCAGCTCAGCCCTTTGGATaGCTGCATAAGGTCATTCCC +
Preference number: 4 (lower is better)
Translates to: RFLCCPVCVRLGFLLDPPAQPFG*LHKVIP
Trigger: GGGAATGACCTTATGCAGGCATCCAAAGGGCTGAGC...TGGTGGATCCAGCAGGAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCCACAGCAAGATGTGCTaGTCCAGTTTCGATGACACG +
Preference number: 4 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICHSKMC*SSFDDT
Trigger: CGTGTCATCGAAACTGGAGCAGCACATCTTGCTGTG...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGTGGGGAGGATGGCAATaGAGTGGAGGAATAGAAATG +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVEWGGWQ*SGGIEM
Trigger: CATTTCTATTCCTCCACTGCATTGCCATCCTCCCCA...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCTGCATCTTCACCACATaGACTGATGCCCCTTATCCC +
Preference number: 4 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICCIFTT*TDAPYP
Trigger: GGGATAAGGGGCATCAGTGCATGTGGTGAAGATGCA...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp ATGTATATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATGCCTAGAGACCCTGCCCACCACCCGCTaGCCCCGACCATCTTTTGCA +
Preference number: 4 (lower is better)
Translates to: MYIPWYGIHRDYRPCLETLPTTR*PRPSFA
Trigger: TGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAG...GGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp CCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACCATTCGCGGGCTCCTGAGTTaGTCTCCGGAGTCCAACACG +
Preference number: 4 (lower is better)
Translates to: PDHLLQDPIWLAITQHTIRGLLS*SPESNT
Trigger: CGTGTTGGACTCCGGAGAGCAACTCAGGAGCCCGCG...AATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR GCA 90 bp ACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGCGGCTGCAGTATTCCCGGGGTACTCGACCTaGCACGTGACCAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: TVHSTRRWIWKRAAAAVFPGYST*HVTSCV
Trigger: CACACAGCTGGTCACGTGGCAGGTCGAGTACCCCGG...GAATACTGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR CCA 90 bp ATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGGAAAGGGAAGTGCCCTaGCTGGTGGAGGTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: MTRFLPLIHGCDPWMLHLEREVP*LVEVLP
Trigger: GGGAAGCACCTCCACCAGCCAGGGCACTTCCCTTTC...CAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CCA 90 bp CGCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCAACACACTCTTCCGCTTaGATTTCTGGCAGGATTCAC +
Preference number: 4 (lower is better)
Translates to: RPARSTQAPRFVSTASRPTHSSA*ISGRIH
Trigger: GTGAATCCTGCCAGAAATCCAAGCGGAAGAGTGTGT...TGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACGGGATGGTCTGCAAGTaGCTGTTGTCATCTAAAAGG +
Preference number: 4 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHGMVCK*LLSSKR
Trigger: CCTTTTAGATGACAACAGCCACTTGCAGACCATCCC...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGAGTTCACCACCACGTTaGCCTTGCCTTTCATTTCTT +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVESSPPR*PCLSFL
Trigger: AAGAAATGAAAGGCAAGGTCAACGTGGTGGTGAACT...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAAGCACCCCGAGGTCTGTaGTGGTCACCTTCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: LNSLEATSLDRRSAMNSEAPRGL*WSPSRP
Trigger: TGGACGAGAAGGTGACCATCACAGACCTCGGGGTGC...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp AGGTTTCTGTGCTGTCCGGTGTGTGTGAGGCTGGGCTTCCTGCTGGATCCACCAATCTGCCATGAACAGTaGAAGACCCATCCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: RFLCCPVCVRLGFLLDPPICHEQ*KTHPKW
Trigger: CCACTTGGGATGGGTCTTTCACTGTTCATGGCAGAT...TGGTGGATCCAGCAGGAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGTCAAAATTACAGAGATaGGATGGAGAGGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVESKLQR*DGEEAG
Trigger: CCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGA...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGAGTTGTACTTTTGCCCGTAGCTGGCATTaGGGACAGGCAGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LPLIHGCDPWMLHLSCTFARSWH*GQAASW
Trigger: CCAGGAGGCTGCCTGTCCTCAATGCCAGCTACGGGC...AAAAGTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR TCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGTCTTCTGACAAACGATaGCAGCTGGTGCATACTTTC +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVESSDKR*QLVHTF
Trigger: GAAAGTATGCACCAGCTGTCATCGTTTGTCAGAAGA...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR GCA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAGGGAATCCAAACATaGGGATTCCTTTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWQGIQT*GFLSSS
Trigger: TGAGGATGAAAGGAATCCGCATGTTTGGATTCCCTG...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR GCA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACAGAGCTTTCATCCCGTTaGATGGCCCAAGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTELSSR*MAQGGG
Trigger: TCCTCCTCCTTGGGCCATGCAACGGGATGAAAGCTC...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR GCA 90 bp GATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTCTTCCTGGGCTGAGCTaGAAGGAGAGTGACAGCCCT +
Preference number: 4 (lower is better)
Translates to: DDTLPPIDPWMRSMDAPPLPGLS*KESDSP
Trigger: AGGGCTGTCACTCTCCTTGCAGCTCAGCCCAGGAAG...AGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp CGCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCAGTGATTTGCTCATCTTaGGAGGAGGCAAAGTTGATG +
Preference number: 4 (lower is better)
Translates to: RPARSTQAPRFVSTASRPVICSS*EEAKLM
Trigger: CATCAACTTTGCCTCCTCGCAAGATGAGCAAATCAC...TGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGGTGATTTGCTCATCTTaGGAGGAGGCAAAGTTGATG +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVEVICSS*EEAKLM
Trigger: CATCAACTTTGCCTCCTCGCAAGATGAGCAAATCAC...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCAGGGCTCAGAGGATTTaGGTCCATGTGTTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICRAQRI*VHVFVL
Trigger: AAGGACAAACACATGGACGCAAATCCTCTGAGCCCT...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp GATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTCGTGACTACCGCCCATaGCTAGAGACCAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: DDTLPPIDPWMRSMDAPPRDYRP*LETSLF
Trigger: GAAGAGGCTGGTCTCTAGGCATGGGCGGTAGTCACG...AGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGAAGTGCTTGCAAACCTaGATCTTCACCACATGCACT +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVEKCLQT*IFTTCT
Trigger: AGTGCATGTGGTGAAGATGCAGGTTTGCAAGCACTT...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAACCAGTGACTACCTGGTaGGGTGAGAAGCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LNSLEATSLDRRSAMNSEPVTTW*GEKPRL
Trigger: CAGCCTGGGCTTCTCACCCCACCAGGTAGTCACTGG...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CCA 90 bp CTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGAGTTGTACTTTTCGGCAGGCCTCCTGCTaGAGACGATGGGCACTCTCC +
Preference number: 4 (lower is better)
Translates to: LPLIHGCDPWMLHLSCTFRQASC*RRWALS
Trigger: GGAGAGTGCCCATCGTCTCCAGCAGGAGGCCTGCCG...AAAAGTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGCCTGAGCCACTGCAGTaGCAAAGATGGCCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: MTRFLPLIHGCDPWMLHLPEPLQ*QRWPCC
Trigger: GCAACAGGGCCATCTTTGCCACTGCAGTGGCTCAGG...CAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ACCTGCATCTTCACCACATGCACTGATGCCCCTTATCCCTTCGCACCTCCAAGATTTCCCCATTGCTTCTaGGGAGGTCCACCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: TCIFTTCTDAPYPFAPPRFPHCF*GGPPGL
Trigger: CAGCCCAGGTGGACCTCCCCAGAAGCAATGGGGAAA...TCTTGGAGGTGCGAAGGGATAAGGGGCATCAGTGCATGTGGTGAAGATGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp AGGTTTCTGTGCTGTCCGGTGTGTGTGAGGCTGGGCTTCCTGCTGGATCCACCACCTCCCATTGATCCATaGATGCGATCCATGGATGCT +
Preference number: 4 (lower is better)
Translates to: RFLCCPVCVRLGFLLDPPPPIDP*MRSMDA
Trigger: AGCATCCATGGATCGCATCCATGGATCAATGGGAGG...TGGTGGATCCAGCAGGAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ACCTGCATCTTCACCACATGCACTGATGCCCCTTATCCCTTCGCACCTCCAAGACAAAGACGGACGGCGTaGGACATATGCCCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: TCIFTTCTDAPYPFAPPRQRRTA*DICPGC
Trigger: GCAACCTGGGCATATGTCCCACGCCGTCCGTCTTTG...TCTTGGAGGTGCGAAGGGATAAGGGGCATCAGTGCATGTGGTGAAGATGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGATTACAGAGATGAGATaGAGAGGAAGCAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWITEMR*RGSREK
Trigger: CTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAAT...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ACAGCAAGATGTGCTGCTCCAGTTTCGATGACACGCTTCCTCCCATTGATCCATAGTACCGGCGACCAGTaGTGCCACAGCGTCCCCATC +
Preference number: 4 (lower is better)
Translates to: TARCAAPVSMTRFLPLIHSTGDQ*CHSVPI
Trigger: GATGGGGACGCTGTGGCACCACTGGTCGCCGGTACT...ATGGATCAATGGGAGGAAGCGTGTCATCGAAACTGGAGCAGCACATCTTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
3UTR CAA 72 bp GCTGAACCTTTCGGGGCTGACTGCAGGACCAAGTGCTaGCAAACCTGCATCTTCACCACATGCACTGATGCC +
Preference number: 4 (lower is better)
Translates to: AEPFGADCRTKC*QTCIFTTCTDA
Trigger: GGCATCAGTGCATGTGGTGAAGATGCAGGTTTGCAAGCACTTGGTCCTGCAGTCAGCCCCGAAAGGTTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp ATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGAAGACTGCCCTTAGGTaGGTGGAGCTGTGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: MTRFLPLIHGCDPWMLHLKTALR*VELCPS
Trigger: TGAGGGACACAGCTCCACTCACCTAAGGGCAGTCTT...CAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR TCA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACCCTGTCAATGGCAGTaGTTTGCTCATCTTGCGAGG +
Preference number: 4 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTPCQWQ*FAHLAR
Trigger: CCTCGCAAGATGAGCAAATCACTGCCATTGACAGGG...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAATCCTTGGCCTGTCCATaGTCTGAGACAGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LNSLEATSLDRRSAMNSESLACP*SETALA
Trigger: GGCCAGAGCTGTCTCAGATCATGGACAGGCCAAGGA...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCAATAAAGAAGTACCCTaGAGGGCTCAGAGGATTTGC +
Preference number: 4 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICNKEVP*RAQRIC
Trigger: GCAAATCCTCTGAGCCCTTCAGGGTACTTCTTTATT...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp GTTTCGATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCGCGGACAGGAGCAGGTaGCTTACTGGCTGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: VSMTRFLPLIHGCDPWMLADRSR*LTGCRN
Trigger: GTTTCTGCAGCCAGTAAGTCACCTGCTCCTGTCCGC...GAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATCGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp GATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTTGGCTCGCACGCCGATaGTGTTCACGCCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: DDTLPPIDPWMRSMDAPPWLARR*CSRLSS
Trigger: TGAAGAAAGGCGTGAACATCATCGGCGTGCGAGCCA...AGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR TCA 90 bp GTTTCGATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCTCCCAAGTCAGACGTaGTCTCTCCGGGGTACTCGA +
Preference number: 4 (lower is better)
Translates to: VSMTRFLPLIHGCDPWMLLPSQT*SLRGTR
Trigger: TCGAGTACCCCGGAGAGATCACGTCTGACTTGGGAG...GAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATCGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR GCA 90 bp CCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACCATTTCCGTGATGTCCACTTaGCAGTCTGAGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PDHLLQDPIWLAITQHTISVMST*QSEPSR
Trigger: CCTGCTGGGCTCAGACTGGCAAGTGGACATCACGGA...AATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGATCCTAAACAAGAATTaGGACATGTCTTCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVEILNKN*DMSSGE
Trigger: CTCTCCCGAAGACATGTCCCAATTCTTGTTTAGGAT...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CCA 90 bp ACAGCAAGATGTGCTGCTCCAGTTTCGATGACACGCTTCCTCCCATTGATCCATGACGAGGCACAGGGGTaGATTCTGAGGCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TARCAAPVSMTRFLPLIHDEAQG*ILRPVL
Trigger: CAGGACAGGCCTCAGAATCCACCCCTGTGCCTCGTC...ATGGATCAATGGGAGGAAGCGTGTCATCGAAACTGGAGCAGCACATCTTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CCA 90 bp GCTTTGGGGAGGATGGCAATGCAGTGGAGGAATAGAAATGGATACATTGTGAACCCTGCAGGCACGGGGTaGATTCTGAGGCCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: ALGRMAMQWRNRNGYIVNPAGTG*ILRPVL
Trigger: CAGGACGGGCCTCAGAATCCACCCCGTGCCTGCAGG...GTTCACAATGTATCCATTTCTATTCCTCCACTGCATTGCCATCCTCCCCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CCA 90 bp AAACCTCTTAAGCAAGACACTGTACTCTGGAATGTGTGCGTCGATGCGGACTCCAGCTCCTCAAGGAGCTaGCTGTGCTGCACCTGGACC +
Preference number: 4 (lower is better)
Translates to: KPLKQDTVLWNVCVDADSSSSRS*LCCTWT
Trigger: GGTCCAGGTGCAGCACAGCCAGCTCCTTGAGGAGCT...GGAGTCCGCATCGACGCACACATTCCAGAGTACAGTGTCTTGCTTAAGAGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CCA 90 bp ATGTATATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATGCCTAGAGACCAAGTGCCCTGGCTGGTaGAGGTGCTTCCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: MYIPWYGIHRDYRPCLETKCPGW*RCFPFL
Trigger: GAGGAAAGGGAAGCACCTCCACCAGCCAGGGCACTT...GGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CCA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAACCTGAGCCACTGCAGTaGCAAAGATGGCCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LNSLEATSLDRRSAMNSEPEPLQ*QRWPCC
Trigger: GCAACAGGGCCATCTTTGCCACTGCAGTGGCTCAGG...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGTCTCATCCAAAGATGTaGCCATCAAGGAGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVESHPKM*PSRRSL
Trigger: AAGACTTCTCCTTGATGGCCACATCTTTGGATGAGA...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGTTCCGCTTGGATTTCTaGCAGGATTCACTAATAACC +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVEFRLDF*QDSLIT
Trigger: GGTTATTAGTGAATCCTGCCAGAAATCCAAGCGGAA...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ATGTATATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATGCCTAGAGACCTTTCCCCATTGCTTCTaGGGAGGTCCACCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: MYIPWYGIHRDYRPCLETFPHCF*GGPPGL
Trigger: CAGCCCAGGTGGACCTCCCCAGAAGCAATGGGGAAA...GGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ATGTATATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATGCCTAGAGACCCGATGGAGTTCCTGGTaGGGTACTCGTCGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: MYIPWYGIHRDYRPCLETRWSSW*GTRRLR
Trigger: CCTCAGACGACGAGTACCCCACCAGGAACTCCATCG...GGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACGGCTTTGGGGAGGATaGCAATGCAGTGGAGGAATA +
Preference number: 4 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTRLWGG*QCSGGI
Trigger: TATTCCTCCACTGCATTGCCATCCTCCCCAAAGCCG...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ATGTATATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATGCCTAGAGACCGGCTGGGCTTCCTGCTaGATCCACCACTTTCACACC +
Preference number: 4 (lower is better)
Translates to: MYIPWYGIHRDYRPCLETGWASC*IHHFHT
Trigger: GGTGTGAAAGTGGTGGATCCAGCAGGAAGCCCAGCC...GGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGCGGCTGCAGTATTCACACGCAGATGGATTTaGAAGCGGGCAGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TVHSTRRWIWKRAAAAVFTRRWI*KRAAAA
Trigger: TGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGT...GAATACTGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp GTTTCGATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCGCACCACTTGCTCGATaGAGAAAGGCCCGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: VSMTRFLPLIHGCDPWMLAPLAR*RKARSW
Trigger: CCAGCTACGGGCCTTTCTCCATCGAGCAAGTGGTGC...GAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATCGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR CCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGTCCAATCAAGTCCTTTaGGCTCACATAGATCTTGGA +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVESNQVL*AHIDLG
Trigger: TCCAAGATCTATGTGAGCCCAAAGGACTTGATTGGA...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422113.7
3UTR CAA 72 bp TGTGCTGCTCCAGTTTCGATGACACGCTTCCTCCCATaGATCCATGGATGCGATCCATGGATGCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: CAAPVSMTRFLP*IHGCDPWMLHL
Trigger: CAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATCGAAACTGGAGCAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp ATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGGCTCCTCCACCTGCATaGAGTCATTTATCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: MTRFLPLIHGCDPWMLHLAPPPA*SHLSAP
Trigger: CGGAGCTGATAAATGACTTCATGCAGGTGGAGGAGC...CAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp GTTTCGATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCTCTGCAGAAGTTCCTaGGCCACTGCAGTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: VSMTRFLPLIHGCDPWMLLCRSS*ATAVAK
Trigger: CTTTGCCACTGCAGTGGCTCAGGAACTTCTGCAGAG...GAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATCGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp AAACCTCTTAAGCAAGACACTGTACTCTGGAATGTGTGCGTCGATGCGGACTCCGCCGGGGTCATTGGCTaGGGCTGTATGGATAGTGTC +
Preference number: 4 (lower is better)
Translates to: KPLKQDTVLWNVCVDADSAGVIG*GCMDSV
Trigger: GACACTATCCATACAGCCTCAGCCAATGACCCCGGC...GGAGTCCGCATCGACGCACACATTCCAGAGTACAGTGTCTTGCTTAAGAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCATAGTCTGCAATATTaGATATTGGAGCCATGTGGA +
Preference number: 4 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWHSLQY*ILEPCG
Trigger: TCCACATGGCTCCAATATTCAATATTGCAGACTATG...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACAGCCTTTGAGAGACAATaGCTCACAATCATGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTAFERQ*LTIMPP
Trigger: GGGAGGCATGATTGTGAGTCATTGTCTCTCAAAGGC...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACAACAGGAGATCTGCCATaGACAGTGAAAGACCCATCC +
Preference number: 4 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTTGDLP*TVKDPS
Trigger: GGATGGGTCTTTCACTGTTCATGGCAGATCTCCTGT...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp ATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGGAGGCAGGAATTCTCTaGTGTATCCTTGCCCCCATC +
Preference number: 4 (lower is better)
Translates to: MTRFLPLIHGCDPWMLHLEAGIL*CILAPI
Trigger: GATGGGGGCAAGGATACATCAGAGAATTCCTGCCTC...CAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp ATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGGGAGTGAGCGTGAGATaGGGCAGGAATTCTCTGATG +
Preference number: 4 (lower is better)
Translates to: MTRFLPLIHGCDPWMLHLGVSVR*GRNSLM
Trigger: CATCAGAGAATTCCTGCCTCATCTCACGCTCACTCC...CAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAAAATCCGTGCGCTCCTTaGCATCCCAAATGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LNSLEATSLDRRSAMNSENPCAP*HPKWKG
Trigger: GCCCTTCCATTTGGGATGTCAAGGAGCGCACGGATT...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR GCA 90 bp CCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACCATTCCAACTTCTACCTGGTaGAAGAGGGCTCCTCCATGC +
Preference number: 4 (lower is better)
Translates to: PDHLLQDPIWLAITQHTIPTSTW*KRAPPC
Trigger: GCATGGAGGAGCCCTCTTGCACCAGGTAGAAGTTGG...AATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR GCA 90 bp CTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGAGTTGTACTTTTAGGATCTGTCCGCCTTaGAGCTTGGCGATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LPLIHGCDPWMLHLSCTFRICPP*SLAILG
Trigger: GCCCAGGATCGCCAAGCTGCAAGGCGGACAGATCCT...AAAAGTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACATGGCCTTTCTTCTTCTaGAGGATGGACCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTWPFFF*RMDLSV
Trigger: GACAGACAGGTCCATCCTGCAGAAGAAGAAAGGCCA...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp GATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTTCGCTGGGGATGGTCTaGAAGTGGCTGTTGTCATCT +
Preference number: 4 (lower is better)
Translates to: DDTLPPIDPWMRSMDAPPSLGMV*KWLLSS
Trigger: AGATGACAACAGCCACTTGCAGACCATCCCCAGCGA...AGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp ACCTGCATCTTCACCACATGCACTGATGCCCCTTATCCCTTCGCACCTCCAAGAAATGACTCACAATCATaGCTCCCACAGCTGACGGCG +
Preference number: 4 (lower is better)
Translates to: TCIFTTCTDAPYPFAPPRNDSQS*LPQLTA
Trigger: CGCCGTCAGCTGTGGGAGGCATGATTGTGAGTCATT...TCTTGGAGGTGCGAAGGGATAAGGGGCATCAGTGCATGTGGTGAAGATGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp ACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGCGGCTGCAGTATTCCCTTTCGGGGCTGACTaGAGGACCAAGTGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: TVHSTRRWIWKRAAAAVFPFGAD*RTKCLQ
Trigger: TTGCAAGCACTTGGTCCTGCAGTCAGCCCCGAAAGG...GAATACTGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp ATGTATATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATGCCTAGAGACCCCCCCGACCATCTTTTaGAGGATCCTATCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: MYIPWYGIHRDYRPCLETPPTIF*RILSGW
Trigger: CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGG...GGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACAT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ACAGCAAGATGTGCTGCTCCAGTTTCGATGACACGCTTCCTCCCATTGATCCATTTAGCCCCAGAAGTCTaGCTCCAGAGCTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: TARCAAPVSMTRFLPLIHLAPEV*LQSSGC
Trigger: GCAGCCTGAGCTCTGGAGCCAGACTTCTGGGGCTAA...ATGGATCAATGGGAGGAAGCGTGTCATCGAAACTGGAGCAGCACATCTTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CCA 90 bp ACCTGCATCTTCACCACATGCACTGATGCCCCTTATCCCTTCGCACCTCCAAGAACAGGATCTGAATGGTaGTCATCCCAAGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: TCIFTTCTDAPYPFAPPRTGSEW*SSQAPA
Trigger: GGCAGGAGCTTGGGATGACCACCATTCAGATCCTGT...TCTTGGAGGTGCGAAGGGATAAGGGGCATCAGTGCATGTGGTGAAGATGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ACAGCAAGATGTGCTGCTCCAGTTTCGATGACACGCTTCCTCCCATTGATCCATCTGCAGTGGCAAAGATaGCCCTGTTGCTTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TARCAAPVSMTRFLPLIHLQWQR*PCCFLG
Trigger: GCCCAGGAAGCAACAGGGCCATCTTTGCCACTGCAG...ATGGATCAATGGGAGGAAGCGTGTCATCGAAACTGGAGCAGCACATCTTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGGAGCCATCACTGAACTaGACCCAGCAACTGATGGCT +
Preference number: 4 (lower is better)
Translates to: MTRFLPLIHGCDPWMLHLEPSLN*TQQLMA
Trigger: AGCCATCAGTTGCTGGGTCCAGTTCAGTGATGGCTC...CAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ACAGCAAGATGTGCTGCTCCAGTTTCGATGACACGCTTCCTCCCATTGATCCATCGATGGAGTTCCTGGTaGGGTACTCGTCGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: TARCAAPVSMTRFLPLIHRWSSW*GTRRLR
Trigger: CCTCAGACGACGAGTACCCCACCAGGAACTCCATCG...ATGGATCAATGGGAGGAAGCGTGTCATCGAAACTGGAGCAGCACATCTTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGCGCTACTCATCACGATaGAGTTCCTGGTGGGGTACT +
Preference number: 4 (lower is better)
Translates to: MTRFLPLIHGCDPWMLHLRYSSR*SSWWGT
Trigger: AGTACCCCACCAGGAACTCCATCGTGATGAGTAGCG...CAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ACCTGCATCTTCACCACATGCACTGATGCCCCTTATCCCTTCGCACCTCCAAGACCAGGGTCCAGATCCTaGCAGACCCACTTAATGTCA +
Preference number: 4 (lower is better)
Translates to: TCIFTTCTDAPYPFAPPRPGSRS*QTHLMS
Trigger: TGACATTAAGTGGGTCTGCCAGGATCTGGACCCTGG...TCTTGGAGGTGCGAAGGGATAAGGGGCATCAGTGCATGTGGTGAAGATGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CGCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCATTGGCTGAGGCTGTATaGATAGTGTCATCCTTATTT +
Preference number: 4 (lower is better)
Translates to: RPARSTQAPRFVSTASRPLAEAV*IVSSLF
Trigger: AAATAAGGATGACACTATCCATACAGCCTCAGCCAA...TGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGTTGGCTGAGGCTGTATaGATAGTGTCATCCTTATTT +
Preference number: 4 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVELAEAV*IVSSLF
Trigger: AAATAAGGATGACACTATCCATACAGCCTCAGCCAA...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CGCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACCATGTGTTTGTCCTTaGCATGTAGTTACAAAGGTA +
Preference number: 4 (lower is better)
Translates to: RPARSTQAPRFVSTASRPPCVCP*HVVTKV
Trigger: TACCTTTGTAACTACATGCCAAGGACAAACACATGG...TGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp AGGTTTCTGTGCTGTCCGGTGTGTGTGAGGCTGGGCTTCCTGCTGGATCCACCATTTCCTCACGGTCTTTaGTATATAGTGGATGGCCAC +
Preference number: 4 (lower is better)
Translates to: RFLCCPVCVRLGFLLDPPFPHGL*YIVDGH
Trigger: GTGGCCATCCACTATATACCAAAGACCGTGAGGAAA...TGGTGGATCCAGCAGGAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
3UTR CAA 72 bp ACCCCGATTTGTCTCAACAGCCTCGAGGCCACATCTTaGGACAGGAGATCTGCCATGAACAGTGAAAGACCC +
Preference number: 4 (lower is better)
Translates to: TPICLNSLEATS*DRRSAMNSERP
Trigger: GGGTCTTTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAGACAAATCGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp ATGTATATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATGCCTAGAGACCTCTCGTCCAGCACAGTaGTGGTCTTTTCAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: MYIPWYGIHRDYRPCLETSRPAQ*WSFQRG
Trigger: TCCTCGCTGAAAAGACCATCACTGTGCTGGACGAGA...GGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGAGTTGTACTTTTTCCTTGGCCTGTCCATaGTCTGAGACAGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LPLIHGCDPWMLHLSCTFSLACP*SETALA
Trigger: GGCCAGAGCTGTCTCAGATCATGGACAGGCCAAGGA...AAAAGTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACATTCGCACCTCCAAGATaGAGAAGGTTTCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTFAPPR*RRFLCC
Trigger: ACAGCACAGAAACCTTCTTCATCTTGGAGGTGCGAA...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAACTCACTCCCTCATTCTaGCTCCAGAGATCATTCCCC +
Preference number: 4 (lower is better)
Translates to: LNSLEATSLDRRSAMNSELTPSF*LQRSFP
Trigger: GGGGAATGATCTCTGGAGGCAGAATGAGGGAGTGAG...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR GCA 90 bp GATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTCTGGGCTCCTCCACCTaGATGAAGTCATTTATCAGC +
Preference number: 4 (lower is better)
Translates to: DDTLPPIDPWMRSMDAPPLGSST*MKSFIS
Trigger: GCTGATAAATGACTTCATGCAGGTGGAGGAGCCCAG...AGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp ATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGACAGCTCTGTCCGGTTaGTTAACCCAACCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: MTRFLPLIHGCDPWMLHLTALSG*LTQPSH
Trigger: ATGACTGGGTTGGGTTAAGCAACCGGACAGAGCTGT...CAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACAAGGGCTCAGAGGATTTaGGTCCATGTGTTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTRAQRI*VHVFVL
Trigger: AAGGACAAACACATGGACGCAAATCCTCTGAGCCCT...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACATCTTTTCAGCGAGGATaGTGTCTGACAGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTSFQRG*CLTEET
Trigger: TGTCTCCTCTGTCAGACACCATCCTCGCTGAAAAGA...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ACCTGCATCTTCACCACATGCACTGATGCCCCTTATCCCTTCGCACCTCCAAGACATGGATGCGATCCATaGATGCTCCACCTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: TCIFTTCTDAPYPFAPPRHGCDP*MLHLSC
Trigger: ACAACTCAGGTGGAGCATCCATGGATCGCATCCATG...TCTTGGAGGTGCGAAGGGATAAGGGGCATCAGTGCATGTGGTGAAGATGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp GATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTAGGATCCTATCTGGCTaGCAATCACCCAACACACCA +
Preference number: 4 (lower is better)
Translates to: DDTLPPIDPWMRSMDAPPRILSG*QSPNTP
Trigger: TGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCT...AGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp GATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTTTGCAGGATCCTATCTaGCTGGCAATCACCCAACAC +
Preference number: 4 (lower is better)
Translates to: DDTLPPIDPWMRSMDAPPLQDPI*LAITQH
Trigger: GTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAA...AGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGGACTACCTGGTGGGGTaGGAAGCCCAGGCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: HSYNLQYILHADGFGSGQDYLVG*EAQAVC
Trigger: GCAAACAGCCTGGGCTTCTCACCCCACCAGGTAGTC...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR TCA 90 bp ACAGCAAGATGTGCTGCTCCAGTTTCGATGACACGCTTCCTCCCATTGATCCATTCTCGTCCAGCACAGTaGTGGTCTTTTCAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: TARCAAPVSMTRFLPLIHSRPAQ*WSFQRG
Trigger: TCCTCGCTGAAAAGACCATCACTGTGCTGGACGAGA...ATGGATCAATGGGAGGAAGCGTGTCATCGAAACTGGAGCAGCACATCTTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGGCACCCCGAGGTCTGTaGTGGTCACCTTCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: HSYNLQYILHADGFGSGQAPRGL*WSPSRP
Trigger: TGGACGAGAAGGTGACCATCACAGACCTCGGGGTGC...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp ACCTGCATCTTCACCACATGCACTGATGCCCCTTATCCCTTCGCACCTCCAAGACTCATTGAAAAGGGGTaGCAGCTTAATCACCCAACC +
Preference number: 4 (lower is better)
Translates to: TCIFTTCTDAPYPFAPPRLIEKG*QLNHPT
Trigger: GGTTGGGTGATTAAGCTGTCACCCCTTTTCAATGAG...TCTTGGAGGTGCGAAGGGATAAGGGGCATCAGTGCATGTGGTGAAGATGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp ACCTGCATCTTCACCACATGCACTGATGCCCCTTATCCCTTCGCACCTCCAAGATTTGTAAATCAGAAATaGCTCCACCCGGGACTGCAG +
Preference number: 4 (lower is better)
Translates to: TCIFTTCTDAPYPFAPPRFVNQK*LHPGLQ
Trigger: CTGCAGTCCCGGGTGGAGTCATTTCTGATTTACAAA...TCTTGGAGGTGCGAAGGGATAAGGGGCATCAGTGCATGTGGTGAAGATGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR TCA 90 bp ATGTATATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATGCCTAGAGACCCCTTTGCCCTCAACGTaGAGCGATCTTCAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: MYIPWYGIHRDYRPCLETPLPST*SDLQWN
Trigger: ATTCCACTGAAGATCGCTTCACGTTGAGGGCAAAGG...GGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR GCA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAATCAAGGAGGGACCCATaGACAGCACAGCTCATTCTT +
Preference number: 4 (lower is better)
Translates to: LNSLEATSLDRRSAMNSESRRDP*TAQLIL
Trigger: AAGAATGAGCTGTGCTGTGCATGGGTCCCTCCTTGA...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR GCA 90 bp ACAGCAAGATGTGCTGCTCCAGTTTCGATGACACGCTTCCTCCCATTGATCCATAGTTGTGCAGCTCTTTaGAGTCCCCAGGGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: TARCAAPVSMTRFLPLIHSCAAL*SPQGPD
Trigger: ATCTGGACCCTGGGGACTGCAAAGAGCTGCACAACT...ATGGATCAATGGGAGGAAGCGTGTCATCGAAACTGGAGCAGCACATCTTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp ACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGCGGCTGCAGTATTCCCATTGATCCATGGATaGGATCCATGGATGCTCCAC +
Preference number: 4 (lower is better)
Translates to: TVHSTRRWIWKRAAAAVFPLIHG*DPWMLH
Trigger: GTGGAGCATCCATGGATCGCATCCATGGATCAATGG...GAATACTGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp ATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGTGGGGAGGATGGCAATaGAGTGGAGGAATAGAAATG +
Preference number: 4 (lower is better)
Translates to: MTRFLPLIHGCDPWMLHLWGGWQ*SGGIEM
Trigger: CATTTCTATTCCTCCACTGCATTGCCATCCTCCCCA...CAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp ATGTATATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATGCCTAGAGACCGCAGGACCAAGTGCTTaGAAACCTGCATCTTCACCA +
Preference number: 4 (lower is better)
Translates to: MYIPWYGIHRDYRPCLETAGPSA*KPASSP
Trigger: TGGTGAAGATGCAGGTTTGCAAGCACTTGGTCCTGC...GGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACCATTCATGGATGCGATCCATaGATGCTCCACCTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: PDHLLQDPIWLAITQHTIHGCDP*MLHLSC
Trigger: ACAACTCAGGTGGAGCATCCATGGATCGCATCCATG...AATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACCATTCCTCCCATTGATCCATaGATGCGATCCATGGATGCT +
Preference number: 4 (lower is better)
Translates to: PDHLLQDPIWLAITQHTIPPIDP*MRSMDA
Trigger: AGCATCCATGGATCGCATCCATGGATCAATGGGAGG...AATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp GTTTCGATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCTGTCAGCCACTTCCTTaGCCTGTCCATGATCTGAGA +
Preference number: 4 (lower is better)
Translates to: VSMTRFLPLIHGCDPWMLCQPLP*PVHDLR
Trigger: TCTCAGATCATGGACAGGCCAAGGAAGTGGCTGACA...GAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATCGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ATGTATATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATGCCTAGAGACCCACCATTCTCTACCTTaGAGTGAGCGTGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: MYIPWYGIHRDYRPCLETHHSLP*SEREMR
Trigger: CCTCATCTCACGCTCACTCCAAGGTAGAGAATGGTG...GGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACAATTACAGAGATGAGATaGAGAGGAAGCAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTITEMR*RGSREK
Trigger: CTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAAT...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp GTTTCGATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCGAGCAGGTGACTTACTaGCTGCAGAAACCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: VSMTRFLPLIHGCDPWMLEQVTY*LQKPQS
Trigger: AGACTGAGGTTTCTGCAGCCAGTAAGTCACCTGCTC...GAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATCGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp ATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGAGTTCACCACCACGTTaGCCTTGCCTTTCATTTCTT +
Preference number: 4 (lower is better)
Translates to: MTRFLPLIHGCDPWMLHLSSPPR*PCLSFL
Trigger: AAGAAATGAAAGGCAAGGTCAACGTGGTGGTGAACT...CAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAAAGGCTGAAAGGTGAGTaGGAACCAATGTCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LNSLEATSLDRRSAMNSERLKGE*EPMSVC
Trigger: ACACACAGACATTGGTTCTCACTCACCTTTCAGCCT...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp ACCTGCATCTTCACCACATGCACTGATGCCCCTTATCCCTTCGCACCTCCAAGACATGGATGCTCCACCTaGGTTGTACTTTTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: TCIFTTCTDAPYPFAPPRHGCST*VVLFFH
Trigger: ATGGAAGAAAAGTACAACTCAGGTGGAGCATCCATG...TCTTGGAGGTGCGAAGGGATAAGGGGCATCAGTGCATGTGGTGAAGATGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp GATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTAATAAAGAAGTACCCTaGAGGGCTCAGAGGATTTGC +
Preference number: 4 (lower is better)
Translates to: DDTLPPIDPWMRSMDAPPNKEVP*RAQRIC
Trigger: GCAAATCCTCTGAGCCCTTCAGGGTACTTCTTTATT...AGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp ACAGCAAGATGTGCTGCTCCAGTTTCGATGACACGCTTCCTCCCATTGATCCATATCTGCCATGAACAGTaGAAGACCCATCCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: TARCAAPVSMTRFLPLIHICHEQ*KTHPKW
Trigger: CCACTTGGGATGGGTCTTTCACTGTTCATGGCAGAT...ATGGATCAATGGGAGGAAGCGTGTCATCGAAACTGGAGCAGCACATCTTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp ACCTGCATCTTCACCACATGCACTGATGCCCCTTATCCCTTCGCACCTCCAAGATGGAAAACAGACAACTaGAGAGCAGAGAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: TCIFTTCTDAPYPFAPPRWKTDN*RAERER
Trigger: TCTCTCTCTCTCTGCTCTTCAGTTGTCTGTTTTCCA...TCTTGGAGGTGCGAAGGGATAAGGGGCATCAGTGCATGTGGTGAAGATGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGAGACGTCCGCGTTGTTaGTGTGGTAGGTCACGGGGA +
Preference number: 4 (lower is better)
Translates to: HSYNLQYILHADGFGSGQRRPRC*CGRSRG
Trigger: TCCCCGTGACCTACCACATCAACAACGCGGACGTCT...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR GCA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGTCCGTGATGTCCACTTaGCAGTCTGAGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HSYNLQYILHADGFGSGQSVMST*QSEPSR
Trigger: CCTGCTGGGCTCAGACTGGCAAGTGGACATCACGGA...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp CTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGAGTTGTACTTTTCATCCATTTCCCCATTaGTTCTGGGGAGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: LPLIHGCDPWMLHLSCTFHPFPH*FWGGPP
Trigger: AGGTGGACCTCCCCAGAAGCAATGGGGAAATGGATG...AAAAGTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp ATGTATATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATGCCTAGAGACCTCAATGGCAGTGATTTaGTCATCTTGCGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: MYIPWYGIHRDYRPCLETSMAVI*SSCEEA
Trigger: TGCCTCCTCGCAAGATGAGCAAATCACTGCCATTGA...GGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp AAACCTCTTAAGCAAGACACTGTACTCTGGAATGTGTGCGTCGATGCGGACTCCCACAGCAAGATGTGCTaGTCCAGTTTCGATGACACG +
Preference number: 4 (lower is better)
Translates to: KPLKQDTVLWNVCVDADSHSKMC*SSFDDT
Trigger: CGTGTCATCGAAACTGGAGCAGCACATCTTGCTGTG...GGAGTCCGCATCGACGCACACATTCCAGAGTACAGTGTCTTGCTTAAGAGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp AAACCTCTTAAGCAAGACACTGTACTCTGGAATGTGTGCGTCGATGCGGACTCCGCTCACAGCAAGATGTaGTGCTCCAGTTTCGATGAC +
Preference number: 4 (lower is better)
Translates to: KPLKQDTVLWNVCVDADSAHSKM*CSSFDD
Trigger: GTCATCGAAACTGGAGCAGCACATCTTGCTGTGAGC...GGAGTCCGCATCGACGCACACATTCCAGAGTACAGTGTCTTGCTTAAGAGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp GCTTTGGGGAGGATGGCAATGCAGTGGAGGAATAGAAATGGATACATTGTGAACGCAAATACTACAAACTaGCCTCTCCCTCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: ALGRMAMQWRNRNGYIVNANTTN*PLPPPP
Trigger: GGGTGGGGGAGGGAGAGGGCAGTTTGTAGTATTTGC...GTTCACAATGTATCCATTTCTATTCCTCCACTGCATTGCCATCCTCCCCAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp AAACCTCTTAAGCAAGACACTGTACTCTGGAATGTGTGCGTCGATGCGGACTCCGACTGCAGGACCAAGTaGTTGCAAACCTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: KPLKQDTVLWNVCVDADSDCRTK*LQTCIF
Trigger: GAAGATGCAGGTTTGCAAGCACTTGGTCCTGCAGTC...GGAGTCCGCATCGACGCACACATTCCAGAGTACAGTGTCTTGCTTAAGAGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGAGTTGTACTTTTGAGCCATCACTGAACTaGACCCAGCAACTGATGGCT +
Preference number: 4 (lower is better)
Translates to: LPLIHGCDPWMLHLSCTFEPSLN*TQQLMA
Trigger: AGCCATCAGTTGCTGGGTCCAGTTCAGTGATGGCTC...AAAAGTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp GATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTAATTTGGGGTCTTGGTaGATGGAGACTACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: DDTLPPIDPWMRSMDAPPNLGSW*METTFS
Trigger: TGAGAAGGTAGTCTCCATCCACCAAGACCCCAAATT...AGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAAACACACTCTTCCGCTTaGATTTCTGGCAGGATTCAC +
Preference number: 4 (lower is better)
Translates to: LNSLEATSLDRRSAMNSETHSSA*ISGRIH
Trigger: GTGAATCCTGCCAGAAATCCAAGCGGAAGAGTGTGT...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ATGTATATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATGCCTAGAGACCGGGATGGTCTGCAAGTaGCTGTTGTCATCTAAAAGG +
Preference number: 4 (lower is better)
Translates to: MYIPWYGIHRDYRPCLETGMVCK*LLSSKR
Trigger: CCTTTTAGATGACAACAGCCACTTGCAGACCATCCC...GGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACTACAGAATGTCACTTaGGAGTTGACACAAAACCCA +
Preference number: 4 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTLQNVT*ELTQNP
Trigger: TGGGTTTTGTGTCAACTCCCAAGTGACATTCTGTAG...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGCGGCTGCAGTATTCTTCCTCATGATATCCTaGTTGGCCTCCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TVHSTRRWIWKRAAAAVFFLMIS*LASFRK
Trigger: CTTCCTGAAGGAGGCCAACCAGGATATCATGAGGAA...GAATACTGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR TCA 90 bp GCTTTGGGGAGGATGGCAATGCAGTGGAGGAATAGAAATGGATACATTGTGAACGCTCCTCCACCTGCATaGAGTCATTTATCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: ALGRMAMQWRNRNGYIVNAPPPA*SHLSAP
Trigger: CGGAGCTGATAAATGACTTCATGCAGGTGGAGGAGC...GTTCACAATGTATCCATTTCTATTCCTCCACTGCATTGCCATCCTCCCCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp ACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGCGGCTGCAGTATTCTGGGCCTTCTGTCACTaGCATTGTTTTCCATGTGAA +
Preference number: 4 (lower is better)
Translates to: TVHSTRRWIWKRAAAAVFWAFCH*HCFPCE
Trigger: TTCACATGGAAAACAATGTCAGTGACAGAAGGCCCA...GAATACTGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp ACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGCGGCTGCAGTATTCCATGGATGCTCCACCTaGGTTGTACTTTTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: TVHSTRRWIWKRAAAAVFHGCST*VVLFFH
Trigger: ATGGAAGAAAAGTACAACTCAGGTGGAGCATCCATG...GAATACTGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp GCTTTGGGGAGGATGGCAATGCAGTGGAGGAATAGAAATGGATACATTGTGAACCACGCTTCCTCCCATTaGTCCATGGATGCGATCCAT +
Preference number: 4 (lower is better)
Translates to: ALGRMAMQWRNRNGYIVNHASSH*SMDAIH
Trigger: ATGGATCGCATCCATGGATCAATGGGAGGAAGCGTG...GTTCACAATGTATCCATTTCTATTCCTCCACTGCATTGCCATCCTCCCCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATAGAAGCCCAGGCTGTTTaGCTCAAGGAGGGACCCATG +
Preference number: 4 (lower is better)
Translates to: RHTLKITEMRWRGSREKIEAQAV*LKEGPM
Trigger: CATGGGTCCCTCCTTGAGGCAAACAGCCTGGGCTTC...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR GCA 90 bp CTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGAGTTGTACTTTTCTGGGCTCCTCCACCTaGATGAAGTCATTTATCAGC +
Preference number: 4 (lower is better)
Translates to: LPLIHGCDPWMLHLSCTFLGSST*MKSFIS
Trigger: GCTGATAAATGACTTCATGCAGGTGGAGGAGCCCAG...AAAAGTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp ACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGCGGCTGCAGTATTCTCTCTGATGTATCCTTaGCCCCATCTTCATAGGCTT +
Preference number: 4 (lower is better)
Translates to: TVHSTRRWIWKRAAAAVFSLMYP*PHLHRL
Trigger: AAGCCTATGAAGATGGGGGCAAGGATACATCAGAGA...GAATACTGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp AAACCTCTTAAGCAAGACACTGTACTCTGGAATGTGTGCGTCGATGCGGACTCCTCTGATAAAGGAAGATaGTCCCGATCCTCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: KPLKQDTVLWNVCVDADSSDKGR*SRSSAR
Trigger: CCTTGCAGAGGATCGGGAGCATCTTCCTTTATCAGA...GGAGTCCGCATCGACGCACACATTCCAGAGTACAGTGTCTTGCTTAAGAGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR CCA 90 bp ACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGCGGCTGCAGTATTCAATTTGGGGTCTTGGTaGATGGAGACTACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: TVHSTRRWIWKRAAAAVFNLGSW*METTFS
Trigger: TGAGAAGGTAGTCTCCATCCACCAAGACCCCAAATT...GAATACTGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ATGTATATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATGCCTAGAGACCTTGAATTTGGGGTCTTaGTGGATGGAGACTACCTTC +
Preference number: 4 (lower is better)
Translates to: MYIPWYGIHRDYRPCLETLNLGS*WMETTF
Trigger: GAAGGTAGTCTCCATCCACCAAGACCCCAAATTCAA...GGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGCGGCTGCAGTATTCGGAATGTATATCCCCTaGTATGGAATTCACCGTGAC +
Preference number: 4 (lower is better)
Translates to: TVHSTRRWIWKRAAAAVFGMYIP*YGIHRD
Trigger: GTCACGGTGAATTCCATACCAGGGGATATACATTCC...GAATACTGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGAGTTGTACTTTTGAGCAGGTGACTTACTaGCTGCAGAAACCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: LPLIHGCDPWMLHLSCTFEQVTY*LQKPQS
Trigger: AGACTGAGGTTTCTGCAGCCAGTAAGTCACCTGCTC...AAAAGTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp GCTTTGGGGAGGATGGCAATGCAGTGGAGGAATAGAAATGGATACATTGTGAACCATTCTACACGCAGATaGATTTGGAAGCGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: ALGRMAMQWRNRNGYIVNHSTRR*IWKRAA
Trigger: CGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAATG...GTTCACAATGTATCCATTTCTATTCCTCCACTGCATTGCCATCCTCCCCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAAGGACAGGCAGCCTCCTaGATTTGTAAATCAGAAATG +
Preference number: 4 (lower is better)
Translates to: LNSLEATSLDRRSAMNSEGQAAS*ICKSEM
Trigger: CATTTCTGATTTACAAATCCAGGAGGCTGCCTGTCC...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR TCA 90 bp GATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTTCATTTCTTTCCCATTaGCAAAGACGTAGTCACATC +
Preference number: 4 (lower is better)
Translates to: DDTLPPIDPWMRSMDAPPSFLSH*QRRSHI
Trigger: GATGTGACTACGTCTTTGTCAATGGGAAAGAAATGA...AGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp ACAGCAAGATGTGCTGCTCCAGTTTCGATGACACGCTTCCTCCCATTGATCCATCTCTCAGACGCTCAGTaGTTCAGAACTCGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: TARCAAPVSMTRFLPLIHLSDAQ*FRTRFC
Trigger: ACAAAAACGAGTTCTGAATCACTGAGCGTCTGAGAG...ATGGATCAATGGGAGGAAGCGTGTCATCGAAACTGGAGCAGCACATCTTGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGATGTCACTTGGGAGTTaGCACAAAACCCAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: HSYNLQYILHADGFGSGQMSLGS*HKTQGE
Trigger: CTCCCCCTGGGTTTTGTGTCAACTCCCAAGTGACAT...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp GCTTTGGGGAGGATGGCAATGCAGTGGAGGAATAGAAATGGATACATTGTGAACTGGCCTTTCTTCTTCTaGAGGATGGACCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: ALGRMAMQWRNRNGYIVNWPFFF*RMDLSV
Trigger: GACAGACAGGTCCATCCTGCAGAAGAAGAAAGGCCA...GTTCACAATGTATCCATTTCTATTCCTCCACTGCATTGCCATCCTCCCCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp GCTTTGGGGAGGATGGCAATGCAGTGGAGGAATAGAAATGGATACATTGTGAACACAGCTCTGTCCGGTTaGTTAACCCAACCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: ALGRMAMQWRNRNGYIVNTALSG*LTQPSH
Trigger: ATGACTGGGTTGGGTTAAGCAACCGGACAGAGCTGT...GTTCACAATGTATCCATTTCTATTCCTCCACTGCATTGCCATCCTCCCCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATAGCAAATACTACAAACTaGCCTCTCCCTCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: RHTLKITEMRWRGSREKIANTTN*PLPPPP
Trigger: GGGTGGGGGAGGGAGAGGGCAGTTTGTAGTATTTGC...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp TGTTTTCTTTCTAGTAAAGCAAGGGAATGTATATCCCCTGGTATGGAATTCACCCAACTCCACACGCCCTaGACGTTCCACACAGGCACC +
Preference number: 4 (lower is better)
Translates to: CFLSSKARECISPGMEFTQLHTP*TFHTGT
Trigger: GGTGCCTGTGTGGAACGTGCAGGGCGTGTGGAGTTG...GGTGAATTCCATACCAGGGGATATACATTCCCTTGCTTTACTAGAAAGAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp GCTTTGGGGAGGATGGCAATGCAGTGGAGGAATAGAAATGGATACATTGTGAACAGGAAAACCTCTGGATaGTCTCAAGGATCCCTCGAC +
Preference number: 4 (lower is better)
Translates to: ALGRMAMQWRNRNGYIVNRKTSG*SQGSLD
Trigger: GTCGAGGGATCCTTGAGAGCATCCAGAGGTTTTCCT...GTTCACAATGTATCCATTTCTATTCCTCCACTGCATTGCCATCCTCCCCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR GCA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGTGTGTTCAGGATTTCTaGCTCCATAGCCAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: HSYNLQYILHADGFGSGQCVQDF*LHSQRH
Trigger: GTGCCGCTGGCTATGGAGGCAGAAATCCTGAACACA...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR GCA 90 bp TGTTTTCTTTCTAGTAAAGCAAGGGAATGTATATCCCCTGGTATGGAATTCACCGCAGCTCTGTCACTGTaGCGTCGTCCTCCACGGAGA +
Preference number: 4 (lower is better)
Translates to: CFLSSKARECISPGMEFTAALSL*RRPPRR
Trigger: TCTCCGTGGAGGACGACGGCACAGTGACAGAGCTGC...GGTGAATTCCATACCAGGGGATATACATTCCCTTGCTTTACTAGAAAGAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR CCA 90 bp GCTTTGGGGAGGATGGCAATGCAGTGGAGGAATAGAAATGGATACATTGTGAACGAGACAGGATCTGAATaGTGGTCATCCCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ALGRMAMQWRNRNGYIVNETGSE*WSSQAP
Trigger: AGGAGCTTGGGATGACCACCATTCAGATCCTGTCTC...GTTCACAATGTATCCATTTCTATTCCTCCACTGCATTGCCATCCTCCCCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGCGCTACTCATCACGATaGAGTTCCTGGTGGGGTACT +
Preference number: 4 (lower is better)
Translates to: HSYNLQYILHADGFGSGQRYSSR*SSWWGT
Trigger: AGTACCCCACCAGGAACTCCATCGTGATGAGTAGCG...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp GCTTTGGGGAGGATGGCAATGCAGTGGAGGAATAGAAATGGATACATTGTGAACCAAGACACTGTACTCTaGAATGTGTGCGTCGATGCG +
Preference number: 4 (lower is better)
Translates to: ALGRMAMQWRNRNGYIVNQDTVL*NVCVDA
Trigger: CGCATCGACGCACACATTCCAGAGTACAGTGTCTTG...GTTCACAATGTATCCATTTCTATTCCTCCACTGCATTGCCATCCTCCCCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATAGGTGACCAACGGCTTTaGGGAGGATGGCAATGCAGT +
Preference number: 4 (lower is better)
Translates to: RHTLKITEMRWRGSREKIGDQRL*GGWQCS
Trigger: ACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACC...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGCATTCTACACGCAGATaGATTTGGAAGCGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: HSYNLQYILHADGFGSGQHSTRR*IWKRAA
Trigger: CGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAATG...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGAGTTGTACTTTTTTGGTATATAGTGGATaGCCACGCTGTTGTCCAGAC +
Preference number: 4 (lower is better)
Translates to: LPLIHGCDPWMLHLSCTFLVYSG*PRCCPD
Trigger: GTCTGGACAACAGCGTGGCCATCCACTATATACCAA...AAAAGTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR CCA 90 bp GATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTACAAACGATGACAGCTaGTGCATACTTTCCAGTATA +
Preference number: 4 (lower is better)
Translates to: DDTLPPIDPWMRSMDAPPTNDDS*CILSSI
Trigger: TATACTGGAAAGTATGCACCAGCTGTCATCGTTTGT...AGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR TCA 90 bp CTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGAGTTGTACTTTTTCTGTCAGAAACCTGTaGAGAGGTGAGAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: LPLIHGCDPWMLHLSCTFSVRNL*RGEREK
Trigger: CTTTTCTCTCTCACCTCTTCACAGGTTTCTGACAGA...AAAAGTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR TCA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATACACGCTTCCTCCCATTaGTCCATGGATGCGATCCAT +
Preference number: 4 (lower is better)
Translates to: RHTLKITEMRWRGSREKIHASSH*SMDAIH
Trigger: ATGGATCGCATCCATGGATCAATGGGAGGAAGCGTG...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATAGTATGGAATTCACCGTaGCTACCGCCCATGCCTAGA +
Preference number: 4 (lower is better)
Translates to: RHTLKITEMRWRGSREKIVWNSP*LPPMPR
Trigger: TCTAGGCATGGGCGGTAGTCACGGTGAATTCCATAC...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACCATTGAGAAAATTTGTTGGTaGATCCAAATGGGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: PDHLLQDPIWLAITQHTIEKICW*IQMGWK
Trigger: CTTCCAACCCATTTGGATTCACCAACAAATTTTCTC...AATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR CCA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATATTCCTCCCCTTACTATaGGGGAGGAGGTCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: RHTLKITEMRWRGSREKIFLPLL*GRRSWY
Trigger: ATACCAGGACCTCCTCCCCCATAGTAAGGGGAGGAA...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CCA 90 bp CTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGAGTTGTACTTTTTTGAATTTGGGGTCTTaGTGGATGGAGACTACCTTC +
Preference number: 4 (lower is better)
Translates to: LPLIHGCDPWMLHLSCTFLNLGS*WMETTF
Trigger: GAAGGTAGTCTCCATCCACCAAGACCCCAAATTCAA...AAAAGTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ACAGCAAGATGTGCTGCTCCAGTTTCGATGACACGCTTCCTCCCATTGATCCATTTCCGCTTGGATTTCTaGCAGGATTCACTAATAACC +
Preference number: 4 (lower is better)
Translates to: TARCAAPVSMTRFLPLIHFRLDF*QDSLIT
Trigger: GGTTATTAGTGAATCCTGCCAGAAATCCAAGCGGAA...ATGGATCAATGGGAGGAAGCGTGTCATCGAAACTGGAGCAGCACATCTTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp GTTTCGATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCTTACAAAGGTATTTGTaGCCTGTTAGCCCACATGTT +
Preference number: 4 (lower is better)
Translates to: VSMTRFLPLIHGCDPWMLLQRYL*PVSPHV
Trigger: AACATGTGGGCTAACAGGCCACAAATACCTTTGTAA...GAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATCGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp CCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACCATTCCATGTGTTTGTCCTTaGCATGTAGTTACAAAGGTA +
Preference number: 4 (lower is better)
Translates to: PDHLLQDPIWLAITQHTIPCVCP*HVVTKV
Trigger: TACCTTTGTAACTACATGCCAAGGACAAACACATGG...AATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CAA 72 bp TACCCTGAAGGGCTCAGAGGATTTGCGTCCATGTGTTaGTCCTTGGCATGTAGTTACAAAGGTATTTGTGGC +
Preference number: 4 (lower is better)
Translates to: YPEGLRGFASMC*SLACSYKGICG
Trigger: GCCACAAATACCTTTGTAACTACATGCCAAGGACAAACACATGGACGCAAATCCTCTGAGCCCTTCAGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CAA 72 bp CTTACAATCTACAGTACATTCTACACGCAGATGGATTaGGAAGCGGGCAGCGGCTGCAGTATTCAACAGAAC +
Preference number: 4 (lower is better)
Translates to: LTIYSTFYTQMD*EAGSGCSIQQN
Trigger: GTTCTGTTGAATACTGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp TGTTTTCTTTCTAGTAAAGCAAGGGAATGTATATCCCCTGGTATGGAATTCACCCTCTGCAGAAGTTCCTaGGCCACTGCAGTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: CFLSSKARECISPGMEFTLCRSS*ATAVAK
Trigger: CTTTGCCACTGCAGTGGCTCAGGAACTTCTGCAGAG...GGTGAATTCCATACCAGGGGATATACATTCCCTTGCTTTACTAGAAAGAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp AAACCTCTTAAGCAAGACACTGTACTCTGGAATGTGTGCGTCGATGCGGACTCCTTTGGGAGTTTGTGCTaGGGAGATATTTACTTTCCT +
Preference number: 4 (lower is better)
Translates to: KPLKQDTVLWNVCVDADSFGSLC*GDIYFP
Trigger: AGGAAAGTAAATATCTCCTCAGCACAAACTCCCAAA...GGAGTCCGCATCGACGCACACATTCCAGAGTACAGTGTCTTGCTTAAGAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGAGGCTGAAAGGTGAGTaGGAACCAATGTCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: HSYNLQYILHADGFGSGQRLKGE*EPMSVC
Trigger: ACACACAGACATTGGTTCTCACTCACCTTTCAGCCT...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp ATGTATATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATGCCTAGAGACCATTGTGAACTTGATATaGATCAAAAGAGCGTGGTTC +
Preference number: 4 (lower is better)
Translates to: MYIPWYGIHRDYRPCLETIVNLI*IKRAWF
Trigger: GAACCACGCTCTTTTGATTCATATCAAGTTCACAAT...GGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGAGTTGTACTTTTGGGAGGGTAAACTGGTaGAATTTACACACACATGAT +
Preference number: 4 (lower is better)
Translates to: LPLIHGCDPWMLHLSCTFGRVNW*NLHTHD
Trigger: ATCATGTGTGTGTAAATTTCACCAGTTTACCCTCCC...AAAAGTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp AAACCTCTTAAGCAAGACACTGTACTCTGGAATGTGTGCGTCGATGCGGACTCCAACGATGACAGCTGGTaGATACTTTCCAGTATAATC +
Preference number: 4 (lower is better)
Translates to: KPLKQDTVLWNVCVDADSNDDSW*ILSSII
Trigger: GATTATACTGGAAAGTATGCACCAGCTGTCATCGTT...GGAGTCCGCATCGACGCACACATTCCAGAGTACAGTGTCTTGCTTAAGAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR CCA 90 bp CCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACCATTGGGTTAGCATCGTTTTaGCCAAATTTAACTTTGATG +
Preference number: 4 (lower is better)
Translates to: PDHLLQDPIWLAITQHTIGLASF*PNLTLM
Trigger: CATCAAAGTTAAATTTGGCCAAAACGATGCTAACCC...AATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp AAACCTCTTAAGCAAGACACTGTACTCTGGAATGTGTGCGTCGATGCGGACTCCTTACAAAGGTATTTGTaGCCTGTTAGCCCACATGTT +
Preference number: 4 (lower is better)
Translates to: KPLKQDTVLWNVCVDADSLQRYL*PVSPHV
Trigger: AACATGTGGGCTAACAGGCCACAAATACCTTTGTAA...GGAGTCCGCATCGACGCACACATTCCAGAGTACAGTGTCTTGCTTAAGAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATACACCATTCTCTACCTTaGAGTGAGCGTGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: RHTLKITEMRWRGSREKIHHSLP*SEREMR
Trigger: CCTCATCTCACGCTCACTCCAAGGTAGAGAATGGTG...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp TGTTTTCTTTCTAGTAAAGCAAGGGAATGTATATCCCCTGGTATGGAATTCACCAAGGGGAGGGAAAGGTaGGCTTTCATCCCGTTGCAT +
Preference number: 4 (lower is better)
Translates to: CFLSSKARECISPGMEFTKGRER*AFIPLH
Trigger: ATGCAACGGGATGAAAGCTCACCTTTCCCTCCCCTT...GGTGAATTCCATACCAGGGGATATACATTCCCTTGCTTTACTAGAAAGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR TCA 90 bp TGTTTTCTTTCTAGTAAAGCAAGGGAATGTATATCCCCTGGTATGGAATTCACCATGTCACTTGGGAGTTaGCACAAAACCCAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: CFLSSKARECISPGMEFTMSLGS*HKTQGE
Trigger: CTCCCCCTGGGTTTTGTGTCAACTCCCAAGTGACAT...GGTGAATTCCATACCAGGGGATATACATTCCCTTGCTTTACTAGAAAGAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp TGTTTTCTTTCTAGTAAAGCAAGGGAATGTATATCCCCTGGTATGGAATTCACCGTATGGAATTCACCGTaGCTACCGCCCATGCCTAGA +
Preference number: 4 (lower is better)
Translates to: CFLSSKARECISPGMEFTVWNSP*LPPMPR
Trigger: TCTAGGCATGGGCGGTAGTCACGGTGAATTCCATAC...GGTGAATTCCATACCAGGGGATATACATTCCCTTGCTTTACTAGAAAGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGTGGAAAACAGACAACTaGAGAGCAGAGAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: HSYNLQYILHADGFGSGQWKTDN*RAERER
Trigger: TCTCTCTCTCTCTGCTCTTCAGTTGTCTGTTTTCCA...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp ATATTACATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCCGTGACTACCGCCCATaGCTAGAGACCAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: ILHSYNLQYILHADGFGSRDYRP*LETSLF
Trigger: GAAGAGGCTGGTCTCTAGGCATGGGCGGTAGTCACG...GCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATGTAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp TGTTTTCTTTCTAGTAAAGCAAGGGAATGTATATCCCCTGGTATGGAATTCACCTTTCATCCCGTTGCATaGCCCAAGGAGGAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: CFLSSKARECISPGMEFTFHPVA*PKEEER
Trigger: CCTTTCCTCCTCCTTGGGCCATGCAACGGGATGAAA...GGTGAATTCCATACCAGGGGATATACATTCCCTTGCTTTACTAGAAAGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CCA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATATCTTTTCAGCGAGGATaGTGTCTGACAGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: RHTLKITEMRWRGSREKISFQRG*CLTEET
Trigger: TGTCTCCTCTGTCAGACACCATCCTCGCTGAAAAGA...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ATATTACATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCCTGCAGTGGCAAAGATaGCCCTGTTGCTTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: ILHSYNLQYILHADGFGSLQWQR*PCCFLG
Trigger: GCCCAGGAAGCAACAGGGCCATCTTTGCCACTGCAG...GCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATGTAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp GCTTTGGGGAGGATGGCAATGCAGTGGAGGAATAGAAATGGATACATTGTGAACCTACAGAATGTCACTTaGGAGTTGACACAAAACCCA +
Preference number: 4 (lower is better)
Translates to: ALGRMAMQWRNRNGYIVNLQNVT*ELTQNP
Trigger: TGGGTTTTGTGTCAACTCCCAAGTGACATTCTGTAG...GTTCACAATGTATCCATTTCTATTCCTCCACTGCATTGCCATCCTCCCCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp TGTTTTCTTTCTAGTAAAGCAAGGGAATGTATATCCCCTGGTATGGAATTCACCTCATCGATGTCACTGTaGCCTGTCCGGATCCCATTG +
Preference number: 4 (lower is better)
Translates to: CFLSSKARECISPGMEFTSSMSL*PVRIPL
Trigger: CAATGGGATCCGGACAGGCCACAGTGACATCGATGA...GGTGAATTCCATACCAGGGGATATACATTCCCTTGCTTTACTAGAAAGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR TCA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGATATCCAAATTGCTTTaGTTCGAGAGAGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HSYNLQYILHADGFGSGQISKLL*FERERL
Trigger: CAGCCTCTCTCTCTCGAATCAAAGCAATTTGGATAT...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp GCTTTGGGGAGGATGGCAATGCAGTGGAGGAATAGAAATGGATACATTGTGAACCATAGTCTGCAATATTaGATATTGGAGCCATGTGGA +
Preference number: 4 (lower is better)
Translates to: ALGRMAMQWRNRNGYIVNHSLQY*ILEPCG
Trigger: TCCACATGGCTCCAATATTCAATATTGCAGACTATG...GTTCACAATGTATCCATTTCTATTCCTCCACTGCATTGCCATCCTCCCCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp TGTTTTCTTTCTAGTAAAGCAAGGGAATGTATATCCCCTGGTATGGAATTCACCAACGCTAGGCACCACTaGCATTCCCACATTCCAGAT +
Preference number: 4 (lower is better)
Translates to: CFLSSKARECISPGMEFTNARHH*HSHIPD
Trigger: ATCTGGAATGTGGGAATGGCAGTGGTGCCTAGCGTT...GGTGAATTCCATACCAGGGGATATACATTCCCTTGCTTTACTAGAAAGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR GCA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATAAAATGTGTCCTGTCTTaGTGCTCACTCCCTCATTCT +
Preference number: 4 (lower is better)
Translates to: RHTLKITEMRWRGSREKIKCVLS*CSLPHS
Trigger: AGAATGAGGGAGTGAGCAGCAAGACAGGACACATTT...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CCA 90 bp ATATTACATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCCTGCCAACTTCTACCTaGTGCAAGAGGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ILHSYNLQYILHADGFGSLPTST*CKRAPP
Trigger: TGGAGGAGCCCTCTTGCACCAGGTAGAAGTTGGCAG...GCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATGTAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CCA 90 bp CTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGAGTTGTACTTTTGGGTTAGCATCGTTTTaGCCAAATTTAACTTTGATG +
Preference number: 4 (lower is better)
Translates to: LPLIHGCDPWMLHLSCTFGLASF*PNLTLM
Trigger: CATCAAAGTTAAATTTGGCCAAAACGATGCTAACCC...AAAAGTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ATATTACATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGAGGCTGTTCTTTCCTaGACGCTCTCAGACGCTCAG +
Preference number: 4 (lower is better)
Translates to: ILHSYNLQYILHADGFGSEAVLS*TLSDAQ
Trigger: CTGAGCGTCTGAGAGCGTCCAGGAAAGAACAGCCTC...GCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATGTAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATAGGAATGTATATCCCCTaGTATGGAATTCACCGTGAC +
Preference number: 4 (lower is better)
Translates to: RHTLKITEMRWRGSREKIGMYIP*YGIHRD
Trigger: GTCACGGTGAATTCCATACCAGGGGATATACATTCC...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATAGGGAGGGTAAACTGGTaGAATTTACACACACATGAT +
Preference number: 4 (lower is better)
Translates to: RHTLKITEMRWRGSREKIGRVNW*NLHTHD
Trigger: ATCATGTGTGTGTAAATTTCACCAGTTTACCCTCCC...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATAATTGGGTGTTGCTTTTaGGTAATAATAGCAGACGCT +
Preference number: 4 (lower is better)
Translates to: RHTLKITEMRWRGSREKIIGCCF*VIIADA
Trigger: AGCGTCTGCTATTATTACTCAAAAGCAACACCCAAT...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR TCA 90 bp TGTTTTCTTTCTAGTAAAGCAAGGGAATGTATATCCCCTGGTATGGAATTCACCTGGGCCTTCTGTCACTaGCATTGTTTTCCATGTGAA +
Preference number: 4 (lower is better)
Translates to: CFLSSKARECISPGMEFTWAFCH*HCFPCE
Trigger: TTCACATGGAAAACAATGTCAGTGACAGAAGGCCCA...GGTGAATTCCATACCAGGGGATATACATTCCCTTGCTTTACTAGAAAGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ATATTACATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCTTGCAGGATCCTATCTaGCTGGCAATCACCCAACAC +
Preference number: 4 (lower is better)
Translates to: ILHSYNLQYILHADGFGSLQDPI*LAITQH
Trigger: GTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAA...GCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATGTAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR TCA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATAATTGTGAACTTGATATaGATCAAAAGAGCGTGGTTC +
Preference number: 4 (lower is better)
Translates to: RHTLKITEMRWRGSREKIIVNLI*IKRAWF
Trigger: GAACCACGCTCTTTTGATTCATATCAAGTTCACAAT...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
3UTR CAA 72 bp AAATATGAGGACGTTACTGAAAGCAAAGGATTCTCATaGAAAAGGGGTGACAGCTTAATCACCCAACCAAAC +
Preference number: 4 (lower is better)
Translates to: KYEDVTESKGFS*KRGDSLITQPN
Trigger: GTTTGGTTGGGTGATTAAGCTGTCACCCCTTTTCAATGAGAATCCTTTGCTTTCAGTAACGTCCTCATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR GCA 90 bp ATATTACATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCTCTCTGATGTATCCTTaGCCCCATCTTCATAGGCTT +
Preference number: 4 (lower is better)
Translates to: ILHSYNLQYILHADGFGSSLMYP*PHLHRL
Trigger: AAGCCTATGAAGATGGGGGCAAGGATACATCAGAGA...GCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATGTAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ATATTACATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCTCTCATCCAAAGATGTaGCCATCAAGGAGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: ILHSYNLQYILHADGFGSSHPKM*PSRRSL
Trigger: AAGACTTCTCCTTGATGGCCACATCTTTGGATGAGA...GCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATGTAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CCA 90 bp ATATTACATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCTGGAATTTCTGGAGATaGAAACAGGAAAAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: ILHSYNLQYILHADGFGSWNFWR*KQEKSA
Trigger: TGCTGACTTTTCCTGTTTCCATCTCCAGAAATTCCA...GCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATGTAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR GCA 90 bp ATATTACATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCCTGATTCAAATTCTATaGCCAGTATCCTTAGTTTAC +
Preference number: 4 (lower is better)
Translates to: ILHSYNLQYILHADGFGSLIQIL*PVSLVY
Trigger: GTAAACTAAGGATACTGGGCATAGAATTTGAATCAG...GCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATGTAATAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CCA 90 bp GGCCCGAGCAGCCCGGGCGCCCTGCTCCCTCTTCCCGCCAGTCCATaGCCAGGCCGGGAGGCGACGACCGCGCGGGCTCCTGAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: GPSSPGALLPLPASP*PGREATTARAPELL
Trigger: GAGCAACTCAGGAGCCCGCGCGGTCGTCGCCTCCCGGCCTGGCCATGGACTGGCGGGAAGAGGGAGCAGGGCGCCCGGGCTGCTCGGGCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS TCA 90 bp CGCCAGTCCATGGCCAGGCCGGGAGGCGACGACCGCGCGGGCTCCTaGGTTGCTCTCCGGAGTCCAACACGCGCGCAGGCAAACCCCACC +
Preference number: 5 (lower is better)
Translates to: RQSMARPGGDDRAGS*VALRSPTRAQANPT
Trigger: GGTGGGGTTTGCCTGCGCGCGTGTTGGACTCCGGAGAGCAACTCAGGAGCCCGCGCGGTCGTCGCCTCCCGGCCTGGCCATGGACTGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS GCA 90 bp GTCCATGGCCAGGCCGGGAGGCGACGACCGCGCGGGCTCCTGAGTTaGTCTCCGGAGTCCAACACGCGCGCAGGCAAACCCCACCTCCCT +
Preference number: 5 (lower is better)
Translates to: VHGQAGRRRPRGLLS*SPESNTRAGKPHLP
Trigger: AGGGAGGTGGGGTTTGCCTGCGCGCGTGTTGGACTCCGGAGAGCAACTCAGGAGCCCGCGCGGTCGTCGCCTCCCGGCCTGGCCATGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS CCA 90 bp GCGACCAGTGGTGCCACAGCGTCCCCATCTCAGACGGGCACATCCTaGAGACCCGGAGCGCAGATCCTCCGCTCCCCGGCGCCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: ATSGATASPSQTGTS*RPGAQILRSPAPSR
Trigger: CCTGGACGGCGCCGGGGAGCGGAGGATCTGCGCTCCGGGTCTCCAGGATGTGCCCGTCTGAGATGGGGACGCTGTGGCACCACTGGTCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR CAA 90 bp ATGTGTGCGTCGATGCGGACTCCAGGCCTCGCCGCCGAGCCGGGGTCATTGGCTTGTCCGCCTTGCAGCTaGGCGATCCTGGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: MCASMRTPGLAAEPGSLACPPCS*AILGSS
Trigger: GGAGGAGCCCAGGATCGCCAAGCTGCAAGGCGGACA...AGCCAATGACCCCGGCTCGGCGGCGAGGCCTGGAGTCCGCATCGACGCACACAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS GCA 90 bp TTGGAAAACAGGGCGGCCAGGCTGATGAGTACCGGCGACCAGTGGTaGCACAGCGTCCCCATCTCAGACGGGCACATCCTGGAGACCCGG +
Preference number: 5 (lower is better)
Translates to: LENRAARLMSTGDQW*HSVPISDGHILETR
Trigger: CCGGGTCTCCAGGATGTGCCCGTCTGAGATGGGGACGCTGTGGCACCACTGGTCGCCGGTACTCATCAGCCTGGCCGCCCTGTTTTCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS CCA 90 bp TTTATCAGCTCCGTGATGTCCACTTGCCAGTCTGAGCCCAGCAGGTaGGCCAGGTGTCCCCCAGGGCCGGCCGCCTCAGCCACAAACTGC +
Preference number: 5 (lower is better)
Translates to: FISSVMSTCQSEPSR*ARCPPGPAASATNC
Trigger: GCAGTTTGTGGCTGAGGCGGCCGGCCCTGGGGGACACCTGGCCCACCTGCTGGGCTCAGACTGGCAAGTGGACATCACGGAGCTGATAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS TCA 90 bp CTGCATGAAGTCATTTATCAGCTCCGTGATGTCCACTTGCCAGTCTaGGCCCAGCAGGTGGGCCAGGTGTCCCCCAGGGCCGGCCGCCTC +
Preference number: 5 (lower is better)
Translates to: LHEVIYQLRDVHLPV*AQQVGQVSPRAGRL
Trigger: GAGGCGGCCGGCCCTGGGGGACACCTGGCCCACCTGCTGGGCTCAGACTGGCAAGTGGACATCACGGAGCTGATAAATGACTTCATGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CCA 90 bp ACTTTGGAAAACAGGGCGGCCAGGCTGATGAGTACCGGCGACCAGTaGTGCCACAGCGTCCCCATCTCAGACGGGCACATCCTGGAGACC +
Preference number: 5 (lower is better)
Translates to: TLENRAARLMSTGDQ*CHSVPISDGHILET
Trigger: GGTCTCCAGGATGTGCCCGTCTGAGATGGGGACGCTGTGGCACCACTGGTCGCCGGTACTCATCAGCCTGGCCGCCCTGTTTTCCAAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR CAA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCCAGGATCTGTCCGCCTaGCAGCTTGGCGATCCTGGG +
Preference number: 5 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICQDLSA*QLGDPG
Trigger: CCCAGGATCGCCAAGCTGCAAGGCGGACAGATCCTG...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACCGACCTTCCGTCACTTaGGAAAACAGGGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHRPSVT*ENRAAR
Trigger: CCTGGCCGCCCTGTTTTCCAAAGTGACGGAAGGTCG...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR CAA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGCCTGTCCGGATCCCATaGCTTCTCCTCGCGTCTTCC +
Preference number: 5 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVEPVRIP*LLLASS
Trigger: GGAAGACGCGAGGAGAAGCAATGGGATCCGGACAGG...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS GCA 90 bp CCCTCAGAGTTACCCGGGAGTTATGTCCTGCTCACCCCGCTTCTCTaGCCAGTGACTACCTGGTGGGGTGAGAAGCCCAGGCTGTTTGCC +
Preference number: 5 (lower is better)
Translates to: PSELPGSYVLLTPLL*PVTTWWGEKPRLFA
Trigger: GGCAAACAGCCTGGGCTTCTCACCCCACCAGGTAGTCACTGGGCAGAGAAGCGGGGTGAGCAGGACATAACTCCCGGGTAACTCTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS GCA 90 bp CTTCCTGGGCTGAGCTGCAAGGAGAGTGACAGCCCTGTCACCAGCTaGACCCCGAGGTCTGTGATGGTCACCTTCTCGTCCAGCACAGTG +
Preference number: 5 (lower is better)
Translates to: LPGLSCKESDSPVTS*TPRSVMVTFSSSTV
Trigger: CACTGTGCTGGACGAGAAGGTGACCATCACAGACCTCGGGGTGCAGCTGGTGACAGGGCTGTCACTCTCCTTGCAGCTCAGCCCAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CCA 90 bp ATCCCGTTGCATGGCCCAAGGAGGAGGAAAGGGAAGTGCCCTGGCTaGTGGAGGTGCTTCCCTTTCCTCCCCTTACTATGGGGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: IPLHGPRRRKGKCPG*WRCFPFLPLLWGRR
Trigger: CCTCCTCCCCCATAGTAAGGGGAGGAAAGGGAAGCACCTCCACCAGCCAGGGCACTTCCCTTTCCTCCTCCTTGGGCCATGCAACGGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS CCA 90 bp GATCTCTCCGGGGTACTCGACCTGCCACGTGACCAGCTGTGTGGCTaGCAGGTCACCAGGCTCTTCCACCTCCACATCGATCTGCATGAC +
Preference number: 5 (lower is better)
Translates to: DLSGVLDLPRDQLCG*QVTRLFHLHIDLHD
Trigger: GTCATGCAGATCGATGTGGAGGTGGAAGAGCCTGGTGACCTGCCAGCCACACAGCTGGTCACGTGGCAGGTCGAGTACCCCGGAGAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR CAA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACCTTGACCAGGGTGCCTaGTCCTTCTGTTTCCGCAGC +
Preference number: 5 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHLDQGA*SFCFRS
Trigger: GCTGCGGAAACAGAAGGACAAGGCACCCTGGTCAAG...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp ATGTGTGCGTCGATGCGGACTCCAGGCCTCGCCGCCGAGCCGGGGTCATTGGCTATGGGTCCCAAAGGTTaGAACAGCTGCCCATTGATG +
Preference number: 5 (lower is better)
Translates to: MCASMRTPGLAAEPGSLAMGPKG*NSCPLM
Trigger: CATCAATGGGCAGCTGTTCAAACCTTTGGGACCCAT...AGCCAATGACCCCGGCTCGGCGGCGAGGCCTGGAGTCCGCATCGACGCACACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS TCA 90 bp TGGCTGGCAGGTCACCAGGCTCTTCCACCTCCACATCGATCTGCATaGCCTCGTAGGAGGCGCCATCCGCACTGTTTTCTGAGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: WLAGHQALPPPHRSA*PRRRRHPHCFLSQL
Trigger: CAGCTGGCTCAGAAAACAGTGCGGATGGCGCCTCCTACGAGGTCATGCAGATCGATGTGGAGGTGGAAGAGCCTGGTGACCTGCCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS GCA 90 bp CAGAGCCAGGATTTAGCCCCAGAAGTCTGGCTCCAGAGCTCAGGCTaGCAACTTCTACCTGGTGCAAGAGGGCTCCTCCATGCCAGCGCT +
Preference number: 5 (lower is better)
Translates to: QSQDLAPEVWLQSSG*QLLPGARGLLHASA
Trigger: AGCGCTGGCATGGAGGAGCCCTCTTGCACCAGGTAGAAGTTGGCAGCCTGAGCTCTGGAGCCAGACTTCTGGGGCTAAATCCTGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS GCA 90 bp ATCCTGAGAACGTCCTCAACAGGGCATGTGCAGACCACTTTCCCCTaGAGGCACGGGGTGGATTCTGAGGCCCGTCCTGCAGAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: ILRTSSTGHVQTTFP*RHGVDSEARPAEFP
Trigger: AGGGAACTCTGCAGGACGGGCCTCAGAATCCACCCCGTGCCTGCAGGGGAAAGTGGTCTGCACATGCCCTGTTGAGGACGTTCTCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS GCA 90 bp CATGGCCCAAGGAGGAGGAAAGGGAAGTGCCCTGGCTGGTGGAGGTaGTTCCCTTTCCTCCCCTTACTATGGGGGAGGAGGTCCTGGTAT +
Preference number: 5 (lower is better)
Translates to: HGPRRRKGKCPGWWR*FPFLPLLWGRRSWY
Trigger: ATACCAGGACCTCCTCCCCCATAGTAAGGGGAGGAAAGGGAAGCACCTCCACCAGCCAGGGCACTTCCCTTTCCTCCTCCTTGGGCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS CCA 90 bp AGTTATGTCCTGCTCACCCCGCTTCTCTGCCCAGTGACTACCTGGTaGGGTGAGAAGCCCAGGCTGTTTGCCTCAAGGAGGGACCCATGC +
Preference number: 5 (lower is better)
Translates to: SYVLLTPLLCPVTTW*GEKPRLFASRRDPC
Trigger: GCATGGGTCCCTCCTTGAGGCAAACAGCCTGGGCTTCTCACCCCACCAGGTAGTCACTGGGCAGAGAAGCGGGGTGAGCAGGACATAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CAA 90 bp AGGTTTCTGTGCTGTCCGGTGTGTGTGAGGCTGGGCTTCCTGCTGGATCCACCAGCCGAGCCGGGGTCATaGGCTGAGGCTGTATGGATA +
Preference number: 5 (lower is better)
Translates to: RFLCCPVCVRLGFLLDPPAEPGS*AEAVWI
Trigger: TATCCATACAGCCTCAGCCAATGACCCCGGCTCGGC...TGGTGGATCCAGCAGGAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGCTCGAGGCCACATCTTaGGACAGGAGATCTGCCATG +
Preference number: 5 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVELEATS*DRRSAM
Trigger: CATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAG...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS TCA 90 bp AGTTACCCGGGAGTTATGTCCTGCTCACCCCGCTTCTCTGCCCAGTaGCTACCTGGTGGGGTGAGAAGCCCAGGCTGTTTGCCTCAAGGA +
Preference number: 5 (lower is better)
Translates to: SYPGVMSCSPRFSAQ*LPGGVRSPGCLPQG
Trigger: TCCTTGAGGCAAACAGCCTGGGCTTCTCACCCCACCAGGTAGTCACTGGGCAGAGAAGCGGGGTGAGCAGGACATAACTCCCGGGTAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS CCA 90 bp TTTCATCCCGTTGCATGGCCCAAGGAGGAGGAAAGGGAAGTGCCCTaGCTGGTGGAGGTGCTTCCCTTTCCTCCCCTTACTATGGGGGAG +
Preference number: 5 (lower is better)
Translates to: FHPVAWPKEEEREVP*LVEVLPFPPLTMGE
Trigger: CTCCCCCATAGTAAGGGGAGGAAAGGGAAGCACCTCCACCAGCCAGGGCACTTCCCTTTCCTCCTCCTTGGGCCATGCAACGGGATGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CAA 90 bp ATGCCTCCCACAGCTGACGGCGGCACTGGACTGCCTGTGATCGCGCTCACAGCAATAGGCCACTTGAATTaGGGGTCTTGGTGGATGGAG +
Preference number: 5 (lower is better)
Translates to: MPPTADGGTGLPVIALTAIGHLN*GSWWME
Trigger: CTCCATCCACCAAGACCCCAAATTCAAGTGGCCTAT...TGCTGTGAGCGCGATCACAGGCAGTCCAGTGCCGCCGTCAGCTGTGGGAGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CGCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACTGCTGTCACTGGTGTaGGGGTTAGCATCGTTTTGG +
Preference number: 5 (lower is better)
Translates to: RPARSTQAPRFVSTASRPLLSLV*GLASFW
Trigger: CCAAAACGATGCTAACCCCAACACCAGTGACAGCAG...TGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACAACAGCTCTGTCCGGTaGCTTAACCCAACCCAGTCA +
Preference number: 5 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHNSSVR*LNPTQS
Trigger: TGACTGGGTTGGGTTAAGCAACCGGACAGAGCTGTT...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGACACGCTTCCTCCCATaGATCCATGGATGCGATCCA +
Preference number: 5 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWTRFLP*IHGCDP
Trigger: TGGATCGCATCCATGGATCAATGGGAGGAAGCGTGT...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS GCA 90 bp TGGTGGGGTGAGAAGCCCAGGCTGTTTGCCTCAAGGAGGGACCCATaGACAGCACAGCTCATTCTTAAGAGCTCCTCAAGGAGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: WWGEKPRLFASRRDP*TAQLILKSSSRSWL
Trigger: CAGCCAGCTCCTTGAGGAGCTCTTAAGAATGAGCTGTGCTGTGCATGGGTCCCTCCTTGAGGCAAACAGCCTGGGCTTCTCACCCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS GCA 90 bp ATGGTGGTCATCCCAAGCTCCTGCCCCATCAGGATCTGTCCGCCTTaGAGCTTGGCGATCCTGGGCTCCTCCACCTGCATGAAGTCATTT +
Preference number: 5 (lower is better)
Translates to: MVVIPSSCPIRICPP*SLAILGSSTCMKSF
Trigger: AAATGACTTCATGCAGGTGGAGGAGCCCAGGATCGCCAAGCTGCAAGGCGGACAGATCCTGATGGGGCAGGAGCTTGGGATGACCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CCA 90 bp TTCCTCTACCAGGAAGGGCAGAGCCAGGATTTAGCCCCAGAAGTCTaGCTCCAGAGCTCAGGCTGCCAACTTCTACCTGGTGCAAGAGGG +
Preference number: 5 (lower is better)
Translates to: FLYQEGQSQDLAPEV*LQSSGCQLLPGARG
Trigger: CCCTCTTGCACCAGGTAGAAGTTGGCAGCCTGAGCTCTGGAGCCAGACTTCTGGGGCTAAATCCTGGCTCTGCCCTTCCTGGTAGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CAA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAATGTCCGCCTTGCAGCTaGGCGATCCTGGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LNSLEATSLDRRSAMNSECPPCS*AILGSS
Trigger: GGAGGAGCCCAGGATCGCCAAGCTGCAAGGCGGACA...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACATAGGCCACTTGAATTaGGGGTCTTGGTGGATGGAG +
Preference number: 5 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHIGHLN*GSWWME
Trigger: CTCCATCCACCAAGACCCCAAATTCAAGTGGCCTAT...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCTCCTGCGAGGGTTTTTaGGGCCTTCTGTCACTGACA +
Preference number: 5 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICSCEGF*GLLSLT
Trigger: TGTCAGTGACAGAAGGCCCAAAAAACCCTCGCAGGA...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCACACGCTTCCTCCCATaGATCCATGGATGCGATCCA +
Preference number: 5 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICTRFLP*IHGCDP
Trigger: TGGATCGCATCCATGGATCAATGGGAGGAAGCGTGT...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS TCA 90 bp CAGCAACTGATGGCTGCTTCCTGTTTTGGCCTCTGCAGAAGTTCCTaGGCCACTGCAGTGGCAAAGATGGCCCTGTTGCTTCCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: QQLMAASCFGLCRSS*ATAVAKMALLLPGL
Trigger: CAGCCCAGGAAGCAACAGGGCCATCTTTGCCACTGCAGTGGCTCAGGAACTTCTGCAGAGGCCAAAACAGGAAGCAGCCATCAGTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS GCA 90 bp GCGGATTCCTTTCATCCTCAGAACAACCACAACGCTAGGCACCACTaGCATTCCCACATTCCAGATGAGGAAGCCGGCAGGAGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: ADSFHPQNNHNARHH*HSHIPDEEAGRSGG
Trigger: TCCCCCACTCCTGCCGGCTTCCTCATCTGGAATGTGGGAATGGCAGTGGTGCCTAGCGTTGTGGTTGTTCTGAGGATGAAAGGAATCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS GCA 90 bp AGGTCCACCTGGGCTGGGAAGCTGGTGAGGTCGCTGGGGATGGTCTaGAAGTGGCTGTTGTCATCTAAAAGGCTTTCCTGGCCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: RSTWAGKLVRSLGMV*KWLLSSKRLSWPFF
Trigger: GAAGAAAGGCCAGGAAAGCCTTTTAGATGACAACAGCCACTTGCAGACCATCCCCAGCGACCTCACCAGCTTCCCAGCCCAGGTGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CCA 90 bp AAGTGCCCTGGCTGGTGGAGGTGCTTCCCTTTCCTCCCCTTACTATaGGGGAGGAGGTCCTGGTATGGAGCAGACATTGGGTGTTGCTTT +
Preference number: 5 (lower is better)
Translates to: KCPGWWRCFPFLPLL*GRRSWYGADIGCCF
Trigger: AAAGCAACACCCAATGTCTGCTCCATACCAGGACCTCCTCCCCCATAGTAAGGGGAGGAAAGGGAAGCACCTCCACCAGCCAGGGCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CAA 90 bp CGCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCAACCACCACGTTGACCTaGCCTTTCATTTCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: RPARSTQAPRFVSTASRPTTTLT*PFISFP
Trigger: TGGGAAAGAAATGAAAGGCAAGGTCAACGTGGTGGT...TGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp AGGTTTCTGTGCTGTCCGGTGTGTGTGAGGCTGGGCTTCCTGCTGGATCCACCAGTCAATGGCAGTGATTaGCTCATCTTGCGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: RFLCCPVCVRLGFLLDPPVNGSD*LILRGG
Trigger: GCCTCCTCGCAAGATGAGCAAATCACTGCCATTGAC...TGGTGGATCCAGCAGGAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACATGGATGGCCACGCTGTaGTCCAGACGCAGTTCTCTC +
Preference number: 5 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTWMATL*SRRSSL
Trigger: GAGAGAACTGCGTCTGGACAACAGCGTGGCCATCCA...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR CAA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGCTTTCCTCACGGTCTTaGGTATATAGTGGATGGCCA +
Preference number: 5 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVELSSRS*VYSGWP
Trigger: TGGCCATCCACTATATACCAAAGACCGTGAGGAAAG...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR CAA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCTCCAATCAAGTCCTTaGGGCTCACATAGATCTTGG +
Preference number: 5 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWLQSSP*GSHRSW
Trigger: CCAAGATCTATGTGAGCCCAAAGGACTTGATTGGAG...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS CCA 90 bp ACCTGGGCTGGGAAGCTGGTGAGGTCGCTGGGGATGGTCTGCAAGTaGCTGTTGTCATCTAAAAGGCTTTCCTGGCCTTTCTTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: TWAGKLVRSLGMVCK*LLSSKRLSWPFFFC
Trigger: GCAGAAGAAGAAAGGCCAGGAAAGCCTTTTAGATGACAACAGCCACTTGCAGACCATCCCCAGCGACCTCACCAGCTTCCCAGCCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGAGTTGTACTTTTGTCCCTGTGGCTAGGTaGGTGGACTCCTCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: LPLIHGCDPWMLHLSCTFVPVAR*VDSSPG
Trigger: CCCTGGGGAGGAGTCCACCAACCTAGCCACAGGGAC...AAAAGTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CAA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAAGCAAAGATGGCCCTGTaGCTTCCTGGGCTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: LNSLEATSLDRRSAMNSEAKMAL*LPGLSC
Trigger: GCAGCTCAGCCCAGGAAGCAACAGGGCCATCTTTGC...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CCGCCCATGCCTAGAGACCAGCCTCTTCAAAGACGGACGGCGTGGGACATATGCCTTGAATTTGGGGTCTaGGTGGATGGAGACTACCTT +
Preference number: 5 (lower is better)
Translates to: PPMPRDQPLQRRTAWDICLEFGV*VDGDYL
Trigger: AAGGTAGTCTCCATCCACCAAGACCCCAAATTCAAG...GCATATGTCCCACGCCGTCCGTCTTTGAAGAGGCTGGTCTCTAGGCATGGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAAGCCGAGCCGGGGTCATaGGCTGAGGCTGTATGGATA +
Preference number: 5 (lower is better)
Translates to: LNSLEATSLDRRSAMNSEAEPGS*AEAVWI
Trigger: TATCCATACAGCCTCAGCCAATGACCCCGGCTCGGC...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp AGGTTTCTGTGCTGTCCGGTGTGTGTGAGGCTGGGCTTCCTGCTGGATCCACCAAATGTCACTTGGGAGTaGACACAAAACCCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: RFLCCPVCVRLGFLLDPPNVTWE*TQNPGG
Trigger: TCCCCCTGGGTTTTGTGTCAACTCCCAAGTGACATT...TGGTGGATCCAGCAGGAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CGCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCATCTACAGAATGTCACTaGGGAGTTGACACAAAACCC +
Preference number: 5 (lower is better)
Translates to: RPARSTQAPRFVSTASRPSTECH*GVDTKP
Trigger: GGGTTTTGTGTCAACTCCCAAGTGACATTCTGTAGA...TGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp ACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGCGGCTGCAGTATTCCACAGGCACCCCGATTaGTCTCAACAGCCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: TVHSTRRWIWKRAAAAVFHRHPD*SQQPRG
Trigger: GCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTG...GAATACTGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp GATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGCCCCCGACCATCTTTaGCAGGATCCTATCTGGCTG +
Preference number: 5 (lower is better)
Translates to: DDTLPPIDPWMRSMDAPPAPDHL*QDPIWL
Trigger: CAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGC...AGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAATACACGCAGATGGATTaGGAAGCGGGCAGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: LNSLEATSLDRRSAMNSEYTQMD*EAGSGC
Trigger: GCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTA...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp TCTGCCCACCACCCGCTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCATTGGGTGTTGCTTTaGAGTAATAATAGCAGACGC +
Preference number: 5 (lower is better)
Translates to: SAHHPLPPTIFCRILSGWHWVLL*SNNSRR
Trigger: GCGTCTGCTATTATTACTCAAAAGCAACACCCAATG...CCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAGCGGGTGGTGGGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CAA 90 bp GTTTCGATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCTTGACCAGGGTGCCTaGTCCTTCTGTTTCCGCAGC +
Preference number: 5 (lower is better)
Translates to: VSMTRFLPLIHGCDPWMLLDQGA*SFCFRS
Trigger: GCTGCGGAAACAGAAGGACAAGGCACCCTGGTCAAG...GAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATCGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp ATGCCTCCCACAGCTGACGGCGGCACTGGACTGCCTGTGATCGCGCTCACAGCAGGGGTTAGCATCGTTTaGGCCAAATTTAACTTTGAT +
Preference number: 5 (lower is better)
Translates to: MPPTADGGTGLPVIALTAGVSIV*AKFNFD
Trigger: ATCAAAGTTAAATTTGGCCAAAACGATGCTAACCCC...TGCTGTGAGCGCGATCACAGGCAGTCCAGTGCCGCCGTCAGCTGTGGGAGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp GCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACAGCAAAGGATTCTCATaGAAAAGGGGTGACAGCTTA +
Preference number: 5 (lower is better)
Translates to: ALHVPHRHPDLSQQPRGHSKGFS*KRGDSL
Trigger: TAAGCTGTCACCCCTTTTCAATGAGAATCCTTTGCT...GTGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp ACAGCAAGATGTGCTGCTCCAGTTTCGATGACACGCTTCCTCCCATTGATCCATTACACGCAGATGGATTaGGAAGCGGGCAGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: TARCAAPVSMTRFLPLIHYTQMD*EAGSGC
Trigger: GCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTA...ATGGATCAATGGGAGGAAGCGTGTCATCGAAACTGGAGCAGCACATCTTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp GCTTTGGGGAGGATGGCAATGCAGTGGAGGAATAGAAATGGATACATTGTGAACGCGCGGGCTCCTGAGTaGCTCTCCGGAGTCCAACAC +
Preference number: 5 (lower is better)
Translates to: ALGRMAMQWRNRNGYIVNARAPE*LSGVQH
Trigger: GTGTTGGACTCCGGAGAGCAACTCAGGAGCCCGCGC...GTTCACAATGTATCCATTTCTATTCCTCCACTGCATTGCCATCCTCCCCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS CCA 90 bp AAGTCAGCACGTCTCCTTTCCTCACGGTCTTTGGTATATAGTGGATaGCCACGCTGTTGTCCAGACGCAGTTCTCTCAGGGAGGGTTTCC +
Preference number: 5 (lower is better)
Translates to: KSARLLSSRSLVYSG*PRCCPDAVLSGRVS
Trigger: GGAAACCCTCCCTGAGAGAACTGCGTCTGGACAACAGCGTGGCCATCCACTATATACCAAAGACCGTGAGGAAAGGAGACGTGCTGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR CAA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACAATAACCATTTCCACCTaGACCAGGGTGCCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTITIST*TRVPCP
Trigger: AGGACAAGGCACCCTGGTCAAGGTGGAAATGGTTAT...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CGCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCATCGAAGGGAACCTGTTaGTGTCTGTATTTTAATGCA +
Preference number: 5 (lower is better)
Translates to: RPARSTQAPRFVSTASRPSKGTC*CLYFNA
Trigger: TGCATTAAAATACAGACACAAACAGGTTCCCTTCGA...TGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CTCCCCCACCCACAGGTGACCAACGGCTTTGGGGAGGATGGCAATGCAGTGGAGAGTGTCATCCTTATTTaGTCCTGCTGCTTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: LPHPQVTNGFGEDGNAVESVILI*SCCFVS
Trigger: AGAAACAAAGCAGCAGGACAAAATAAGGATGACACT...CTCCACTGCATTGCCATCCTCCCCAAAGCCGTTGGTCACCTGTGGGTGGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp AGGTTTCTGTGCTGTCCGGTGTGTGTGAGGCTGGGCTTCCTGCTGGATCCACCAGATGCTCCACCTGAGTaGTACTTTTCTTCCATAGTC +
Preference number: 5 (lower is better)
Translates to: RFLCCPVCVRLGFLLDPPDAPPE*YFSSIV
Trigger: GACTATGGAAGAAAAGTACAACTCAGGTGGAGCATC...TGGTGGATCCAGCAGGAAGCCCAGCCTCACACACACCGGACAGCACAGAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACCATTCTCGAGGCCACATCTTaGGACAGGAGATCTGCCATG +
Preference number: 5 (lower is better)
Translates to: PDHLLQDPIWLAITQHTILEATS*DRRSAM
Trigger: CATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAG...AATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAATGGCTGCTTCCTGTTTaGGCCTCTGCAGAAGTTCCT +
Preference number: 5 (lower is better)
Translates to: LNSLEATSLDRRSAMNSEWLLPV*ASAEVP
Trigger: AGGAACTTCTGCAGAGGCCAAAACAGGAAGCAGCCA...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACAAACACACTCTTCCGCTaGGATTTCTGGCAGGATTCA +
Preference number: 5 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTNTLFR*DFWQDS
Trigger: TGAATCCTGCCAGAAATCCAAGCGGAAGAGTGTGTT...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACCATTTCCTGCGAGGGTTTTTaGGGCCTTCTGTCACTGACA +
Preference number: 5 (lower is better)
Translates to: PDHLLQDPIWLAITQHTISCEGF*GLLSLT
Trigger: TGTCAGTGACAGAAGGCCCAAAAAACCCTCGCAGGA...AATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp GTTTCGATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCAAGTCGCTCAGCCCTTaGGATGCCTGCATAAGGTCA +
Preference number: 5 (lower is better)
Translates to: VSMTRFLPLIHGCDPWMLKSLSP*DACIRS
Trigger: TGACCTTATGCAGGCATCCAAAGGGCTGAGCGACTT...GAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATCGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAAAAGTCGCTCAGCCCTTaGGATGCCTGCATAAGGTCA +
Preference number: 5 (lower is better)
Translates to: LNSLEATSLDRRSAMNSEKSLSP*DACIRS
Trigger: TGACCTTATGCAGGCATCCAAAGGGCTGAGCGACTT...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACCATTTTTTGTCCTGCTGCTTaGTTTCTCTTCCGGGGGCAC +
Preference number: 5 (lower is better)
Translates to: PDHLLQDPIWLAITQHTIFCPAA*FLFRGH
Trigger: GTGCCCCCGGAAGAGAAACAAAGCAGCAGGACAAAA...AATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAATTTTGTCCTGCTGCTTaGTTTCTCTTCCGGGGGCAC +
Preference number: 5 (lower is better)
Translates to: LNSLEATSLDRRSAMNSEFCPAA*FLFRGH
Trigger: GTGCCCCCGGAAGAGAAACAAAGCAGCAGGACAAAA...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CGCCCTGCACGTTCCACACAGGCACCCCGATTTGTCTCAACAGCCTCGAGGCCACAAGTCTTAAAAATCTaGCCATGCATGATAAACCTC +
Preference number: 5 (lower is better)
Translates to: RPARSTQAPRFVSTASRPQVLKI*PCMINL
Trigger: GAGGTTTATCATGCATGGCAAGATTTTTAAGACTTG...TGGCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTGTGGAACGTGCAGGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CCA 90 bp GATTTCTGCCTCCATAGCCAGCGGCACAACTCCAATCAAGTCCTTTaGGCTCACATAGATCTTGGACACTCCCAAGTCAGACGTGATCTC +
Preference number: 5 (lower is better)
Translates to: DFCLHSQRHNSNQVL*AHIDLGHSQVRRDL
Trigger: GAGATCACGTCTGACTTGGGAGTGTCCAAGATCTATGTGAGCCCAAAGGACTTGATTGGAGTTGTGCCGCTGGCTATGGAGGCAGAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR CAA 90 bp GATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTCTTGAATTTGGGGTCTaGGTGGATGGAGACTACCTT +
Preference number: 5 (lower is better)
Translates to: DDTLPPIDPWMRSMDAPPLEFGV*VDGDYL
Trigger: AAGGTAGTCTCCATCCACCAAGACCCCAAATTCAAG...AGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp ATGTATATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATGCCTAGAGACCATAACCATTTCCACCTaGACCAGGGTGCCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: MYIPWYGIHRDYRPCLETITIST*TRVPCP
Trigger: AGGACAAGGCACCCTGGTCAAGGTGGAAATGGTTAT...GGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGAGTTGTACTTTTGTTCCCTTTCAGTCCTaGTCAGCCACTTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: LPLIHGCDPWMLHLSCTFVPFQS*SATSLA
Trigger: GGCCAAGGAAGTGGCTGACAAGGACTGAAAGGGAAC...AAAAGTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAAAATGTCACTTGGGAGTaGACACAAAACCCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: LNSLEATSLDRRSAMNSENVTWE*TQNPGG
Trigger: TCCCCCTGGGTTTTGTGTCAACTCCCAAGTGACATT...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGCACAGGCACCCCGATTaGTCTCAACAGCCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: HSYNLQYILHADGFGSGQHRHPD*SQQPRG
Trigger: GCCTCGAGGCTGTTGAGACAAATCGGGGTGCCTGTG...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGATCCTGGGGCACCACTaGCTCGATGGAGAAAGGCCC +
Preference number: 5 (lower is better)
Translates to: HSYNLQYILHADGFGSGQILGHH*LDGERP
Trigger: GGGCCTTTCTCCATCGAGCAAGTGGTGCCCCAGGAT...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS TCA 90 bp TTCTCTTCCGGGGGCACCGTTGCTACACATCCTGGAATTAAAGGCTaGAAGGTGAGTGAGAACCAATGTCTGTGTGTGTCTGGCTTACAC +
Preference number: 5 (lower is better)
Translates to: FSSGGTVATHPGIKG*KVSENQCLCVSGLH
Trigger: GTGTAAGCCAGACACACACAGACATTGGTTCTCACTCACCTTTCAGCCTTTAATTCCAGGATGTGTAGCAACGGTGCCCCCGGAAGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CCA 90 bp GATGGAAACAGGAAAAGTCAGCACGTCTCCTTTCCTCACGGTCTTTaGTATATAGTGGATGGCCACGCTGTTGTCCAGACGCAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: DGNRKSQHVSFPHGL*YIVDGHAVVQTQFS
Trigger: AGAGAACTGCGTCTGGACAACAGCGTGGCCATCCACTATATACCAAAGACCGTGAGGAAAGGAGACGTGCTGACTTTTCCTGTTTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR CAA 90 bp AAACCTCTTAAGCAAGACACTGTACTCTGGAATGTGTGCGTCGATGCGGACTCCGCAATGATAGGCCACTaGAATTTGGGGTCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: KPLKQDTVLWNVCVDADSAMIGH*NLGSWW
Trigger: CCACCAAGACCCCAAATTCAAGTGGCCTATCATTGC...GGAGTCCGCATCGACGCACACATTCCAGAGTACAGTGTCTTGCTTAAGAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CTGCCCCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACAAGCAAAGGATTCTCATaGAAAAGGGGTGACAGCTTA +
Preference number: 5 (lower is better)
Translates to: LPPTIFCRILSGWQSPNTSKGFS*KRGDSL
Trigger: TAAGCTGTCACCCCTTTTCAATGAGAATCCTTTGCT...TGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp ACAGCAAGATGTGCTGCTCCAGTTTCGATGACACGCTTCCTCCCATTGATCCATCTCATGATATCCTGGTaGGCCTCCTTCAGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: TARCAAPVSMTRFLPLIHLMISW*ASFRKK
Trigger: CTTCTTCCTGAAGGAGGCCAACCAGGATATCATGAG...ATGGATCAATGGGAGGAAGCGTGTCATCGAAACTGGAGCAGCACATCTTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS TCA 90 bp TCAATGGCAGTGATTTGCTCATCTTGCGAGGAGGCAAAGTTGATGTaGTTCTCCAACAGCTCTGTCCGGTTGCTTAACCCAACCCAGTCA +
Preference number: 5 (lower is better)
Translates to: SMAVICSSCEEAKLM*FSNSSVRLLNPTQS
Trigger: TGACTGGGTTGGGTTAAGCAACCGGACAGAGCTGTTGGAGAATCACATCAACTTTGCCTCCTCGCAAGATGAGCAAATCACTGCCATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CCA 90 bp TCTGTTTCCGCAGCAATGATAGGCCACTTGAATTTGGGGTCTTGGTaGATGGAGACTACCTTCTCATCCAAAGATGTGGCCATCAAGGAG +
Preference number: 5 (lower is better)
Translates to: SVSAAMIGHLNLGSW*METTFSSKDVAIKE
Trigger: CTCCTTGATGGCCACATCTTTGGATGAGAAGGTAGTCTCCATCCACCAAGACCCCAAATTCAAGTGGCCTATCATTGCTGCGGAAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CCA 90 bp CCTTCTGTTTCCGCAGCAATGATAGGCCACTTGAATTTGGGGTCTTaGTGGATGGAGACTACCTTCTCATCCAAAGATGTGGCCATCAAG +
Preference number: 5 (lower is better)
Translates to: PSVSAAMIGHLNLGS*WMETTFSSKDVAIK
Trigger: CTTGATGGCCACATCTTTGGATGAGAAGGTAGTCTCCATCCACCAAGACCCCAAATTCAAGTGGCCTATCATTGCTGCGGAAACAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp ACAGCAAGATGTGCTGCTCCAGTTTCGATGACACGCTTCCTCCCATTGATCCATAAAATGTGTCCTGTCTaGCTGCTCACTCCCTCATTC +
Preference number: 5 (lower is better)
Translates to: TARCAAPVSMTRFLPLIHKMCPV*LLTPSF
Trigger: GAATGAGGGAGTGAGCAGCAAGACAGGACACATTTT...ATGGATCAATGGGAGGAAGCGTGTCATCGAAACTGGAGCAGCACATCTTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CAA 90 bp TGTTTTCTTTCTAGTAAAGCAAGGGAATGTATATCCCCTGGTATGGAATTCACCCAGGATCTGTCCGCCTaGCAGCTTGGCGATCCTGGG +
Preference number: 5 (lower is better)
Translates to: CFLSSKARECISPGMEFTQDLSA*QLGDPG
Trigger: CCCAGGATCGCCAAGCTGCAAGGCGGACAGATCCTG...GGTGAATTCCATACCAGGGGATATACATTCCCTTGCTTTACTAGAAAGAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp GCTTTGGGGAGGATGGCAATGCAGTGGAGGAATAGAAATGGATACATTGTGAACTGGCTGCTTCCTGTTTaGGCCTCTGCAGAAGTTCCT +
Preference number: 5 (lower is better)
Translates to: ALGRMAMQWRNRNGYIVNWLLPV*ASAEVP
Trigger: AGGAACTTCTGCAGAGGCCAAAACAGGAAGCAGCCA...GTTCACAATGTATCCATTTCTATTCCTCCACTGCATTGCCATCCTCCCCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGAGTTGTACTTTTGCAATGATAGGCCACTaGAATTTGGGGTCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: LPLIHGCDPWMLHLSCTFAMIGH*NLGSWW
Trigger: CCACCAAGACCCCAAATTCAAGTGGCCTATCATTGC...AAAAGTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp ACAGCAAGATGTGCTGCTCCAGTTTCGATGACACGCTTCCTCCCATTGATCCATAACACACTCTTCCGCTaGGATTTCTGGCAGGATTCA +
Preference number: 5 (lower is better)
Translates to: TARCAAPVSMTRFLPLIHNTLFR*DFWQDS
Trigger: TGAATCCTGCCAGAAATCCAAGCGGAAGAGTGTGTT...ATGGATCAATGGGAGGAAGCGTGTCATCGAAACTGGAGCAGCACATCTTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGAGTTGTACTTTTATGGGTCCCAAAGGTTaGAACAGCTGCCCATTGATG +
Preference number: 5 (lower is better)
Translates to: LPLIHGCDPWMLHLSCTFMGPKG*NSCPLM
Trigger: CATCAATGGGCAGCTGTTCAAACCTTTGGGACCCAT...AAAAGTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAATTTGCGTCCATGTGTTaGTCCTTGGCATGTAGTTAC +
Preference number: 5 (lower is better)
Translates to: LNSLEATSLDRRSAMNSEFASMC*SLACSY
Trigger: GTAACTACATGCCAAGGACAAACACATGGACGCAAA...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGAGTTGTACTTTTAAGGGCTCAGAGGATTaGCGTCCATGTGTTTGTCCT +
Preference number: 5 (lower is better)
Translates to: LPLIHGCDPWMLHLSCTFKGSED*RPCVCP
Trigger: AGGACAAACACATGGACGCAAATCCTCTGAGCCCTT...AAAAGTACAACTCAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp ATGTATATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATGCCTAGAGACCTCTACAGAATGTCACTaGGGAGTTGACACAAAACCC +
Preference number: 5 (lower is better)
Translates to: MYIPWYGIHRDYRPCLETSTECH*GVDTKP
Trigger: GGGTTTTGTGTCAACTCCCAAGTGACATTCTGTAGA...GGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATAGCCCCCGACCATCTTTaGCAGGATCCTATCTGGCTG +
Preference number: 5 (lower is better)
Translates to: RHTLKITEMRWRGSREKIAPDHL*QDPIWL
Trigger: CAGCCAGATAGGATCCTGCAAAAGATGGTCGGGGGC...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CCA 90 bp ATGTTTGCCGTTCCAACAGCTAACACACTCTTCCGCTTGGATTTCTaGCAGGATTCACTAATAACCATTTCCACCTTGACCAGGGTGCCT +
Preference number: 5 (lower is better)
Translates to: MFAVPTANTLFRLDF*QDSLITISTLTRVP
Trigger: AGGCACCCTGGTCAAGGTGGAAATGGTTATTAGTGAATCCTGCCAGAAATCCAAGCGGAAGAGTGTGTTAGCTGTTGGAACGGCAAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp TGTTTTCTTTCTAGTAAAGCAAGGGAATGTATATCCCCTGGTATGGAATTCACCGCAAAGATGGCCCTGTaGCTTCCTGGGCTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: CFLSSKARECISPGMEFTAKMAL*LPGLSC
Trigger: GCAGCTCAGCCCAGGAAGCAACAGGGCCATCTTTGC...GGTGAATTCCATACCAGGGGATATACATTCCCTTGCTTTACTAGAAAGAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGAACAGCTCTGTCCGGTaGCTTAACCCAACCCAGTCA +
Preference number: 5 (lower is better)
Translates to: HSYNLQYILHADGFGSGQNSSVR*LNPTQS
Trigger: TGACTGGGTTGGGTTAAGCAACCGGACAGAGCTGTT...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGGTCAATGGCAGTGATTaGCTCATCTTGCGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: HSYNLQYILHADGFGSGQVNGSD*LILRGG
Trigger: GCCTCCTCGCAAGATGAGCAAATCACTGCCATTGAC...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp ATGTATATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATGCCTAGAGACCTCCATGTGTTTGTCCTaGGCATGTAGTTACAAAGGT +
Preference number: 5 (lower is better)
Translates to: MYIPWYGIHRDYRPCLETSMCLS*ACSYKG
Trigger: ACCTTTGTAACTACATGCCAAGGACAAACACATGGA...GGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGTGCAGGACCAAGTGCTaGCAAACCTGCATCTTCACC +
Preference number: 5 (lower is better)
Translates to: HSYNLQYILHADGFGSGQCRTKC*QTCIFT
Trigger: GGTGAAGATGCAGGTTTGCAAGCACTTGGTCCTGCA...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp ATGACACGCTTCCTCCCATTGATCCATGGATGCGATCCATGGATGCTCCACCTGTTCAATGTAAGGATTTaGTTCTCTTGTCTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: MTRFLPLIHGCDPWMLHLFNVRI*FSCLVS
Trigger: GGAGACAAGACAAGAGAACAAAATCCTTACATTGAA...CAGGTGGAGCATCCATGGATCGCATCCATGGATCAATGGGAGGAAGCGTGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CAA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAAAGCAGACATTGGGTGTaGCTTTTGAGTAATAATAGC +
Preference number: 5 (lower is better)
Translates to: LNSLEATSLDRRSAMNSESRHWV*LLSNNS
Trigger: GCTATTATTACTCAAAAGCAACACCCAATGTCTGCT...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CAA 90 bp ACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGCGGCTGCAGTATTCTGGCCAAATTTAACTTaGATGTTTGCCGTTCCAACA +
Preference number: 5 (lower is better)
Translates to: TVHSTRRWIWKRAAAAVFWPNLT*MFAVPT
Trigger: TGTTGGAACGGCAAACATCAAAGTTAAATTTGGCCA...GAATACTGCAGCCGCTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAATGGCCAAATTTAACTTaGATGTTTGCCGTTCCAACA +
Preference number: 5 (lower is better)
Translates to: LNSLEATSLDRRSAMNSEWPNLT*MFAVPT
Trigger: TGTTGGAACGGCAAACATCAAAGTTAAATTTGGCCA...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp ATGTATATCCCCTGGTATGGAATTCACCGTGACTACCGCCCATGCCTAGAGACCTCGAAGGGAACCTGTTaGTGTCTGTATTTTAATGCA +
Preference number: 5 (lower is better)
Translates to: MYIPWYGIHRDYRPCLETSKGTC*CLYFNA
Trigger: TGCATTAAAATACAGACACAAACAGGTTCCCTTCGA...GGTCTCTAGGCATGGGCGGTAGTCACGGTGAATTCCATACCAGGGGATATACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATAGCTCTGGCCCAGCCTTaGAGAGACAATGACTCACAA +
Preference number: 5 (lower is better)
Translates to: RHTLKITEMRWRGSREKIALAQP*RDNDSQ
Trigger: TTGTGAGTCATTGTCTCTCAAAGGCTGGGCCAGAGC...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CCCGACCATCTTTTGCAGGATCCTATCTGGCTGGCAATCACCCAACACACCATTCAAGTCTTAAAAATCTaGCCATGCATGATAAACCTC +
Preference number: 5 (lower is better)
Translates to: PDHLLQDPIWLAITQHTIQVLKI*PCMINL
Trigger: GAGGTTTATCATGCATGGCAAGATTTTTAAGACTTG...AATGGTGTGTTGGGTGATTGCCAGCCAGATAGGATCCTGCAAAAGATGGTCGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp GCTTTGGGGAGGATGGCAATGCAGTGGAGGAATAGAAATGGATACATTGTGAACTTTGCGTCCATGTGTTaGTCCTTGGCATGTAGTTAC +
Preference number: 5 (lower is better)
Translates to: ALGRMAMQWRNRNGYIVNFASMC*SLACSY
Trigger: GTAACTACATGCCAAGGACAAACACATGGACGCAAA...GTTCACAATGTATCCATTTCTATTCCTCCACTGCATTGCCATCCTCCCCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CTCAACAGCCTCGAGGCCACATCTTTGGACAGGAGATCTGCCATGAACAGTGAAAAAGAGCGTGGTTCTTaGAACCTGATTCAAATTCTA +
Preference number: 5 (lower is better)
Translates to: LNSLEATSLDRRSAMNSEKERGS*NLIQIL
Trigger: TAGAATTTGAATCAGGTTCAAAGAACCACGCTCTTT...TTCACTGTTCATGGCAGATCTCCTGTCCAAAGATGTGGCCTCGAGGCTGTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGCATCCTAAACAAGAATaGGGACATGTCTTCGGGAGA +
Preference number: 5 (lower is better)
Translates to: HSYNLQYILHADGFGSGQHPKQE*GHVFGR
Trigger: TCTCCCGAAGACATGTCCCAATTCTTGTTTAGGATG...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS-3UTR CAA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATAGATGCTCCACCTGAGTaGTACTTTTCTTCCATAGTC +
Preference number: 5 (lower is better)
Translates to: RHTLKITEMRWRGSREKIDAPPE*YFSSIV
Trigger: GACTATGGAAGAAAAGTACAACTCAGGTGGAGCATC...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp ATATTACATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGTTCCCTTTCAGTCCTaGTCAGCCACTTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: ILHSYNLQYILHADGFGSVPFQS*SATSLA
Trigger: GGCCAAGGAAGTGGCTGACAAGGACTGAAAGGGAAC...GCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATGTAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp TGTTTTCTTTCTAGTAAAGCAAGGGAATGTATATCCCCTGGTATGGAATTCACCAAGGGCTCAGAGGATTaGCGTCCATGTGTTTGTCCT +
Preference number: 5 (lower is better)
Translates to: CFLSSKARECISPGMEFTKGSED*RPCVCP
Trigger: AGGACAAACACATGGACGCAAATCCTCTGAGCCCTT...GGTGAATTCCATACCAGGGGATATACATTCCCTTGCTTTACTAGAAAGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp CATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGGGCAGAGTGTCATCCTTATTTaGTCCTGCTGCTTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: HSYNLQYILHADGFGSGQSVILI*SCCFVS
Trigger: AGAAACAAAGCAGCAGGACAAAATAAGGATGACACT...CTGCCCGCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp ATATTACATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCGCTCTGGCCCAGCCTTaGAGAGACAATGACTCACAA +
Preference number: 5 (lower is better)
Translates to: ILHSYNLQYILHADGFGSALAQP*RDNDSQ
Trigger: TTGTGAGTCATTGTCTCTCAAAGGCTGGGCCAGAGC...GCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATGTAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp GCTTTGGGGAGGATGGCAATGCAGTGGAGGAATAGAAATGGATACATTGTGAACAAAGAGCGTGGTTCTTaGAACCTGATTCAAATTCTA +
Preference number: 5 (lower is better)
Translates to: ALGRMAMQWRNRNGYIVNKERGS*NLIQIL
Trigger: TAGAATTTGAATCAGGTTCAAAGAACCACGCTCTTT...GTTCACAATGTATCCATTTCTATTCCTCCACTGCATTGCCATCCTCCCCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp ATATTACATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCTGCAGGACCAAGTGCTaGCAAACCTGCATCTTCACC +
Preference number: 5 (lower is better)
Translates to: ILHSYNLQYILHADGFGSCRTKC*QTCIFT
Trigger: GGTGAAGATGCAGGTTTGCAAGCACTTGGTCCTGCA...GCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATGTAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp AGACACACACTCAAAATTACAGAGATGAGATGGAGAGGAAGCAGGGAGAAGATAGTGAATCCAAATGGGTaGGAAGGTAGCATTAAATCC +
Preference number: 5 (lower is better)
Translates to: RHTLKITEMRWRGSREKIVNPNG*EGSIKS
Trigger: GGATTTAATGCTACCTTCCAACCCATTTGGATTCAC...TATCTTCTCCCTGCTTCCTCTCCATCTCATCTCTGTAATTTTGAGTGTGTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS-3UTR CAA 90 bp ATATTACATTCTTACAATCTACAGTACATTCTACACGCAGATGGATTTGGAAGCACCACCACGTTGACCTaGCCTTTCATTTCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: ILHSYNLQYILHADGFGSTTTLT*PFISFP
Trigger: TGGGAAAGAAATGAAAGGCAAGGTCAACGTGGTGGT...GCTTCCAAATCCATCTGCGTGTAGAATGTACTGTAGATTGTAAGAATGTAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS-3UTR CAA 90 bp TGTTTTCTTTCTAGTAAAGCAAGGGAATGTATATCCCCTGGTATGGAATTCACCGGGGTTAGCATCGTTTaGGCCAAATTTAACTTTGAT +
Preference number: 5 (lower is better)
Translates to: CFLSSKARECISPGMEFTGVSIV*AKFNFD
Trigger: ATCAAAGTTAAATTTGGCCAAAACGATGCTAACCCC...GGTGAATTCCATACCAGGGGATATACATTCCCTTGCTTTACTAGAAAGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS TCA 72 bp ATGGCCAGGCCGGGAGGCGACGACCGCGCGGGCTCCTaGGTTGCTCTCCGGAGTCCAACACGCGCGCAGGCA +
Preference number: 6 (lower is better)
Translates to: MARPGGDDRAGS*VALRSPTRAQA
Trigger: TGCCTGCGCGCGTGTTGGACTCCGGAGAGCAACTCAGGAGCCCGCGCGGTCGTCGCCTCCCGGCCTGGCCAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS CAA 72 bp CCAGGCCGGGAGGCGACGACCGCGCGGGCTCCTGAGTaGCTCTCCGGAGTCCAACACGCGCGCAGGCAAACC +
Preference number: 6 (lower is better)
Translates to: PGREATTARAPE*LSGVQHARRQT
Trigger: GGTTTGCCTGCGCGCGTGTTGGACTCCGGAGAGCAACTCAGGAGCCCGCGCGGTCGTCGCCTCCCGGCCTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS CAA 90 bp AGTCCATGGCCAGGCCGGGAGGCGACGACCGCGCGGGCTCCTGAGTaGCTCTCCGGAGTCCAACACGCGCGCAGGCAAACCCCACCTCCC +
Preference number: 6 (lower is better)
Translates to: SPWPGREATTARAPE*LSGVQHARRQTPPP
Trigger: GGGAGGTGGGGTTTGCCTGCGCGCGTGTTGGACTCCGGAGAGCAACTCAGGAGCCCGCGCGGTCGTCGCCTCCCGGCCTGGCCATGGACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS CCA 72 bp GGTGCCACAGCGTCCCCATCTCAGACGGGCACATCCTaGAGACCCGGAGCGCAGATCCTCCGCTCCCCGGCG +
Preference number: 6 (lower is better)
Translates to: GATASPSQTGTS*RPGAQILRSPA
Trigger: CGCCGGGGAGCGGAGGATCTGCGCTCCGGGTCTCCAGGATGTGCCCGTCTGAGATGGGGACGCTGTGGCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS GCA 72 bp AGGGCGGCCAGGCTGATGAGTACCGGCGACCAGTGGTaGCACAGCGTCCCCATCTCAGACGGGCACATCCTG +
Preference number: 6 (lower is better)
Translates to: RAARLMSTGDQW*HSVPISDGHIL
Trigger: CAGGATGTGCCCGTCTGAGATGGGGACGCTGTGGCACCACTGGTCGCCGGTACTCATCAGCCTGGCCGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS CCA 72 bp AACAGGGCGGCCAGGCTGATGAGTACCGGCGACCAGTaGTGCCACAGCGTCCCCATCTCAGACGGGCACATC +
Preference number: 6 (lower is better)
Translates to: NRAARLMSTGDQ*CHSVPISDGHI
Trigger: GATGTGCCCGTCTGAGATGGGGACGCTGTGGCACCACTGGTCGCCGGTACTCATCAGCCTGGCCGCCCTGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS GCA 72 bp ACGTCCTCAACAGGGCATGTGCAGACCACTTTCCCCTaGAGGCACGGGGTGGATTCTGAGGCCCGTCCTGCA +
Preference number: 6 (lower is better)
Translates to: TSSTGHVQTTFP*RHGVDSEARPA
Trigger: TGCAGGACGGGCCTCAGAATCCACCCCGTGCCTGCAGGGGAAAGTGGTCTGCACATGCCCTGTTGAGGACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS GCA 72 bp ATCCCAAGCTCCTGCCCCATCAGGATCTGTCCGCCTTaGAGCTTGGCGATCCTGGGCTCCTCCACCTGCATG +
Preference number: 6 (lower is better)
Translates to: IPSSCPIRICPP*SLAILGSSTCM
Trigger: CATGCAGGTGGAGGAGCCCAGGATCGCCAAGCTGCAAGGCGGACAGATCCTGATGGGGCAGGAGCTTGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS GCA 72 bp CCCAAGTCAGACGTGATCTCTCCGGGGTACTCGACCTaGCACGTGACCAGCTGTGTGGCTGGCAGGTCACCA +
Preference number: 6 (lower is better)
Translates to: PKSDVISPGYST*HVTSCVAGRSP
Trigger: TGGTGACCTGCCAGCCACACAGCTGGTCACGTGGCAGGTCGAGTACCCCGGAGAGATCACGTCTGACTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS CCA 72 bp CTGCTCACCCCGCTTCTCTGCCCAGTGACTACCTGGTaGGGTGAGAAGCCCAGGCTGTTTGCCTCAAGGAGG +
Preference number: 6 (lower is better)
Translates to: LLTPLLCPVTTW*GEKPRLFASRR
Trigger: CCTCCTTGAGGCAAACAGCCTGGGCTTCTCACCCCACCAGGTAGTCACTGGGCAGAGAAGCGGGGTGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS CCA 72 bp GGGGTACTCGACCTGCCACGTGACCAGCTGTGTGGCTaGCAGGTCACCAGGCTCTTCCACCTCCACATCGAT +
Preference number: 6 (lower is better)
Translates to: GVLDLPRDQLCG*QVTRLFHLHID
Trigger: ATCGATGTGGAGGTGGAAGAGCCTGGTGACCTGCCAGCCACACAGCTGGTCACGTGGCAGGTCGAGTACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS CAA 72 bp CATCCCAAGCTCCTGCCCCATCAGGATCTGTCCGCCTaGCAGCTTGGCGATCCTGGGCTCCTCCACCTGCAT +
Preference number: 6 (lower is better)
Translates to: HPKLLPHQDLSA*QLGDPGLLHLH
Trigger: ATGCAGGTGGAGGAGCCCAGGATCGCCAAGCTGCAAGGCGGACAGATCCTGATGGGGCAGGAGCTTGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS GCA 72 bp ATTCCAGATGAGGAAGCCGGCAGGAGTGGGGGAGCCTaGCTATGTTCCTCTACCAGGAAGGGCAGAGCCAGG +
Preference number: 6 (lower is better)
Translates to: IPDEEAGRSGGA*LCSSTRKGRAR
Trigger: CCTGGCTCTGCCCTTCCTGGTAGAGGAACATAGGCAGGCTCCCCCACTCCTGCCGGCTTCCTCATCTGGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS GCA 72 bp TTACCCGGGAGTTATGTCCTGCTCACCCCGCTTCTCTaGCCAGTGACTACCTGGTGGGGTGAGAAGCCCAGG +
Preference number: 6 (lower is better)
Translates to: LPGSYVLLTPLL*PVTTWWGEKPR
Trigger: CCTGGGCTTCTCACCCCACCAGGTAGTCACTGGGCAGAGAAGCGGGGTGAGCAGGACATAACTCCCGGGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS GCA 72 bp CTGAGCTGCAAGGAGAGTGACAGCCCTGTCACCAGCTaGACCCCGAGGTCTGTGATGGTCACCTTCTCGTCC +
Preference number: 6 (lower is better)
Translates to: LSCKESDSPVTS*TPRSVMVTFSS
Trigger: GGACGAGAAGGTGACCATCACAGACCTCGGGGTGCAGCTGGTGACAGGGCTGTCACTCTCCTTGCAGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CCA 72 bp GGCTGGTGGAGGTGCTTCCCTTTCCTCCCCTTACTATaGGGGAGGAGGTCCTGGTATGGAGCAGACATTGGG +
Preference number: 6 (lower is better)
Translates to: GWWRCFPFLPLL*GRRSWYGADIG
Trigger: CCCAATGTCTGCTCCATACCAGGACCTCCTCCCCCATAGTAAGGGGAGGAAAGGGAAGCACCTCCACCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS CCA 72 bp CATGGCCCAAGGAGGAGGAAAGGGAAGTGCCCTGGCTaGTGGAGGTGCTTCCCTTTCCTCCCCTTACTATGG +
Preference number: 6 (lower is better)
Translates to: HGPRRRKGKCPG*WRCFPFLPLLW
Trigger: CCATAGTAAGGGGAGGAAAGGGAAGCACCTCCACCAGCCAGGGCACTTCCCTTTCCTCCTCCTTGGGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS CAA 72 bp GACTCATCGATGTCACTGTGGCCTGTCCGGATCCCATaGCTTCTCCTCGCGTCTTCCCTGACGCAGTCCCCT +
Preference number: 6 (lower is better)
Translates to: DSSMSLWPVRIP*LLLASSLTQSP
Trigger: AGGGGACTGCGTCAGGGAAGACGCGAGGAGAAGCAATGGGATCCGGACAGGCCACAGTGACATCGATGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS CAA 90 bp GTCATCCCAAGCTCCTGCCCCATCAGGATCTGTCCGCCTTGCAGCTaGGCGATCCTGGGCTCCTCCACCTGCATGAAGTCATTTATCAGC +
Preference number: 6 (lower is better)
Translates to: VIPSSCPIRICPPCS*AILGSSTCMKSFIS
Trigger: GCTGATAAATGACTTCATGCAGGTGGAGGAGCCCAGGATCGCCAAGCTGCAAGGCGGACAGATCCTGATGGGGCAGGAGCTTGGGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CAA 90 bp AATGGTGGTCATCCCAAGCTCCTGCCCCATCAGGATCTGTCCGCCTaGCAGCTTGGCGATCCTGGGCTCCTCCACCTGCATGAAGTCATT +
Preference number: 6 (lower is better)
Translates to: NGGHPKLLPHQDLSA*QLGDPGLLHLHEVI
Trigger: AATGACTTCATGCAGGTGGAGGAGCCCAGGATCGCCAAGCTGCAAGGCGGACAGATCCTGATGGGGCAGGAGCTTGGGATGACCACCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS TCA 72 bp AGCTCCTCAAGGAGCTGGCTGTGCTGCACCTGGACCTaGCCTTGCTTAGCCCCTCTTCTTCCCCTTCTACTG +
Preference number: 6 (lower is better)
Translates to: SSSRSWLCCTWT*PCLAPLLPLLL
Trigger: CAGTAGAAGGGGAAGAAGAGGGGCTAAGCAAGGTCAGGTCCAGGTGCAGCACAGCCAGCTCCTTGAGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS TCA 72 bp GGTCACCAGGCTCTTCCACCTCCACATCGATCTGCATaGCCTCGTAGGAGGCGCCATCCGCACTGTTTTCTG +
Preference number: 6 (lower is better)
Translates to: GHQALPPPHRSA*PRRRRHPHCFL
Trigger: CAGAAAACAGTGCGGATGGCGCCTCCTACGAGGTCATGCAGATCGATGTGGAGGTGGAAGAGCCTGGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS GCA 72 bp CGGGGAGGTAGGTGGGCAGCAAGGAAAACCTCTGGATaGTCTCAAGGATCCCTCGACCTTCCGTCACTTTGG +
Preference number: 6 (lower is better)
Translates to: RGGRWAARKTSG*SQGSLDLPSLW
Trigger: CCAAAGTGACGGAAGGTCGAGGGATCCTTGAGAGCATCCAGAGGTTTTCCTTGCTGCCCACCTACCTCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS TCA 72 bp CATCCCAAATGGAAGGGCTGCTGGCTCGCACGCCGATaGTGTTCACGCCTTTCTTCACCTTTGCCCTCAACG +
Preference number: 6 (lower is better)
Translates to: HPKWKGCWLARR*CSRLSSPLPST
Trigger: CGTTGAGGGCAAAGGTGAAGAAAGGCGTGAACATCATCGGCGTGCGAGCCAGCAGCCCTTCCATTTGGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS GCA 72 bp GATTTAGCCCCAGAAGTCTGGCTCCAGAGCTCAGGCTaGCAACTTCTACCTGGTGCAAGAGGGCTCCTCCAT +
Preference number: 6 (lower is better)
Translates to: DLAPEVWLQSSG*QLLPGARGLLH
Trigger: ATGGAGGAGCCCTCTTGCACCAGGTAGAAGTTGGCAGCCTGAGCTCTGGAGCCAGACTTCTGGGGCTAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS GCA 72 bp TGGGCTGGGAAGCTGGTGAGGTCGCTGGGGATGGTCTaGAAGTGGCTGTTGTCATCTAAAAGGCTTTCCTGG +
Preference number: 6 (lower is better)
Translates to: WAGKLVRSLGMV*KWLLSSKRLSW
Trigger: CCAGGAAAGCCTTTTAGATGACAACAGCCACTTGCAGACCATCCCCAGCGACCTCACCAGCTTCCCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CAA 72 bp CTCAAGGAGCTGGCTGTGCTGCACCTGGACCTGACCTaGCTTAGCCCCTCTTCTTCCCCTTCTACTGTCTTC +
Preference number: 6 (lower is better)
Translates to: LKELAVLHLDLT*LSPSSSPSTVF
Trigger: GAAGACAGTAGAAGGGGAAGAAGAGGGGCTAAGCAAGGTCAGGTCCAGGTGCAGCACAGCCAGCTCCTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS CAA 90 bp GTCCTGCAGAATTCCCTAGAGGGGCTCGATGGGACTTCACAGAAGTaGCCCACCATGCGAGCTAGCTCAATGATGCACCTCCTGCTGGTT +
Preference number: 6 (lower is better)
Translates to: VLQNSLEGLDGTSQK*PTMRASSMMHLLLV
Trigger: AACCAGCAGGAGGTGCATCATTGAGCTAGCTCGCATGGTGGGCAACTTCTGTGAAGTCCCATCGAGCCCCTCTAGGGAATTCTGCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS TCA 72 bp CTGGTGCATACTTTCCAGTATAATCCGTGCGCTCCTTaGCATCCCAAATGGAAGGGCTGCTGGCTCGCACGC +
Preference number: 6 (lower is better)
Translates to: LVHTFQYNPCAP*HPKWKGCWLAR
Trigger: GCGTGCGAGCCAGCAGCCCTTCCATTTGGGATGTCAAGGAGCGCACGGATTATACTGGAAAGTATGCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS CAA 90 bp GCTGGGAAGCTGGTGAGGTCGCTGGGGATGGTCTGCAAGTGGCTGTaGTCATCTAAAAGGCTTTCCTGGCCTTTCTTCTTCTGCAGGATG +
Preference number: 6 (lower is better)
Translates to: AGKLVRSLGMVCKWL*SSKRLSWPFFFCRM
Trigger: CATCCTGCAGAAGAAGAAAGGCCAGGAAAGCCTTTTAGATGACAACAGCCACTTGCAGACCATCCCCAGCGACCTCACCAGCTTCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS GCA 72 bp TTTCATCCTCAGAACAACCACAACGCTAGGCACCACTaGCATTCCCACATTCCAGATGAGGAAGCCGGCAGG +
Preference number: 6 (lower is better)
Translates to: FHPQNNHNARHH*HSHIPDEEAGR
Trigger: CCTGCCGGCTTCCTCATCTGGAATGTGGGAATGGCAGTGGTGCCTAGCGTTGTGGTTGTTCTGAGGATGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS CCA 72 bp CGTCTCCTTTCCTCACGGTCTTTGGTATATAGTGGATaGCCACGCTGTTGTCCAGACGCAGTTCTCTCAGGG +
Preference number: 6 (lower is better)
Translates to: RLLSSRSLVYSG*PRCCPDAVLSG
Trigger: CCCTGAGAGAACTGCGTCTGGACAACAGCGTGGCCATCCACTATATACCAAAGACCGTGAGGAAAGGAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS TCA 72 bp GTAATAATAGCAGACGCTGTTATGAAAGGTGCTCTCTaGGTACCCAGGCTTCCTGGGGTCCCTGTGGCTAGG +
Preference number: 6 (lower is better)
Translates to: VIIADAVMKGAL*VPRLPGVPVAR
Trigger: CCTAGCCACAGGGACCCCAGGAAGCCTGGGTACTCAGAGAGCACCTTTCATAACAGCGTCTGCTATTATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS CAA 72 bp CTGGTGAGGTCGCTGGGGATGGTCTGCAAGTGGCTGTaGTCATCTAAAAGGCTTTCCTGGCCTTTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: LVRSLGMVCKWL*SSKRLSWPFFF
Trigger: GAAGAAGAAAGGCCAGGAAAGCCTTTTAGATGACAACAGCCACTTGCAGACCATCCCCAGCGACCTCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS GCA 72 bp CACGTCACAGGCTCCGCTTTTCAGGGAATCCAAACATaGGGATTCCTTTCATCCTCAGAACAACCACAACGC +
Preference number: 6 (lower is better)
Translates to: HVTGSAFQGIQT*GFLSSSEQPQR
Trigger: GCGTTGTGGTTGTTCTGAGGATGAAAGGAATCCGCATGTTTGGATTCCCTGAAAAGCGGAGCCTGTGACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS GCA 72 bp CCTCCTGCTGGTTTTCCAAAATGTGTCCTGTCTTGCTaGTCACTCCCTCATTCTGCCTCCAGAGATCATTCC +
Preference number: 6 (lower is better)
Translates to: PPAGFPKCVLSC*SLPHSASRDHS
Trigger: GGAATGATCTCTGGAGGCAGAATGAGGGAGTGAGCAGCAAGACAGGACACATTTTGGAAAACCAGCAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS CCA 72 bp AGGAAAAGTCAGCACGTCTCCTTTCCTCACGGTCTTTaGTATATAGTGGATGGCCACGCTGTTGTCCAGACG +
Preference number: 6 (lower is better)
Translates to: RKSQHVSFPHGL*YIVDGHAVVQT
Trigger: CGTCTGGACAACAGCGTGGCCATCCACTATATACCAAAGACCGTGAGGAAAGGAGACGTGCTGACTTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS CCA 72 bp CTCCATAGCCAGCGGCACAACTCCAATCAAGTCCTTTaGGCTCACATAGATCTTGGACACTCCCAAGTCAGA +
Preference number: 6 (lower is better)
Translates to: LHSQRHNSNQVL*AHIDLGHSQVR
Trigger: TCTGACTTGGGAGTGTCCAAGATCTATGTGAGCCCAAAGGACTTGATTGGAGTTGTGCCGCTGGCTATGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS CAA 72 bp TGCACCTCCTGCTGGTTTTCCAAAATGTGTCCTGTCTaGCTGCTCACTCCCTCATTCTGCCTCCAGAGATCA +
Preference number: 6 (lower is better)
Translates to: CTSCWFSKMCPV*LLTPSFCLQRS
Trigger: TGATCTCTGGAGGCAGAATGAGGGAGTGAGCAGCAAGACAGGACACATTTTGGAAAACCAGCAGGAGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS CAA 72 bp CAGGAAAAGTCAGCACGTCTCCTTTCCTCACGGTCTTaGGTATATAGTGGATGGCCACGCTGTTGTCCAGAC +
Preference number: 6 (lower is better)
Translates to: QEKSARLLSSRS*VYSGWPRCCPD
Trigger: GTCTGGACAACAGCGTGGCCATCCACTATATACCAAAGACCGTGAGGAAAGGAGACGTGCTGACTTTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS CAA 90 bp ACCAGGGTGCCTTGTCCTTCTGTTTCCGCAGCAATGATAGGCCACTaGAATTTGGGGTCTTGGTGGATGGAGACTACCTTCTCATCCAAA +
Preference number: 6 (lower is better)
Translates to: TRVPCPSVSAAMIGH*NLGSWWMETTFSSK
Trigger: TTTGGATGAGAAGGTAGTCTCCATCCACCAAGACCCCAAATTCAAGTGGCCTATCATTGCTGCGGAAACAGAAGGACAAGGCACCCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CAA 90 bp TTCCTCGAAATCCATGCCCCTGTCAATGGCAGTGATTTGCTCATCTaGCGAGGAGGCAAAGTTGATGTGATTCTCCAACAGCTCTGTCCG +
Preference number: 6 (lower is better)
Translates to: FLEIHAPVNGSDLLI*RGGKVDVILQQLCP
Trigger: CGGACAGAGCTGTTGGAGAATCACATCAACTTTGCCTCCTCGCAAGATGAGCAAATCACTGCCATTGACAGGGGCATGGATTTCGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS GCA 72 bp GCCAGCTGCTTTCTTCTGACAAACGATGACAGCTGGTaGATACTTTCCAGTATAATCCGTGCGCTCCTTGAC +
Preference number: 6 (lower is better)
Translates to: ASCFLLTNDDSW*ILSSIIRALLD
Trigger: GTCAAGGAGCGCACGGATTATACTGGAAAGTATGCACCAGCTGTCATCGTTTGTCAGAAGAAAGCAGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS CCA 72 bp GCAGCAATGATAGGCCACTTGAATTTGGGGTCTTGGTaGATGGAGACTACCTTCTCATCCAAAGATGTGGCC +
Preference number: 6 (lower is better)
Translates to: AAMIGHLNLGSW*METTFSSKDVA
Trigger: GGCCACATCTTTGGATGAGAAGGTAGTCTCCATCCACCAAGACCCCAAATTCAAGTGGCCTATCATTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CAA 72 bp CCTTCTGTTTCCGCAGCAATGATAGGCCACTTGAATTaGGGGTCTTGGTGGATGGAGACTACCTTCTCATCC +
Preference number: 6 (lower is better)
Translates to: PSVSAAMIGHLN*GSWWMETTFSS
Trigger: GGATGAGAAGGTAGTCTCCATCCACCAAGACCCCAAATTCAAGTGGCCTATCATTGCTGCGGAAACAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CAA 72 bp CCTTGTCCTTCTGTTTCCGCAGCAATGATAGGCCACTaGAATTTGGGGTCTTGGTGGATGGAGACTACCTTC +
Preference number: 6 (lower is better)
Translates to: PCPSVSAAMIGH*NLGSWWMETTF
Trigger: GAAGGTAGTCTCCATCCACCAAGACCCCAAATTCAAGTGGCCTATCATTGCTGCGGAAACAGAAGGACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CAA 90 bp GTGCCTTGTCCTTCTGTTTCCGCAGCAATGATAGGCCACTTGAATTaGGGGTCTTGGTGGATGGAGACTACCTTCTCATCCAAAGATGTG +
Preference number: 6 (lower is better)
Translates to: VPCPSVSAAMIGHLN*GSWWMETTFSSKDV
Trigger: CACATCTTTGGATGAGAAGGTAGTCTCCATCCACCAAGACCCCAAATTCAAGTGGCCTATCATTGCTGCGGAAACAGAAGGACAAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CAA 90 bp CTGGCAGGATTCACTAATAACCATTTCCACCTTGACCAGGGTGCCTaGTCCTTCTGTTTCCGCAGCAATGATAGGCCACTTGAATTTGGG +
Preference number: 6 (lower is better)
Translates to: LAGFTNNHFHLDQGA*SFCFRSNDRPLEFG
Trigger: CCCAAATTCAAGTGGCCTATCATTGCTGCGGAAACAGAAGGACAAGGCACCCTGGTCAAGGTGGAAATGGTTATTAGTGAATCCTGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS GCA 72 bp CTTTTGAGTAATAATAGCAGACGCTGTTATGAAAGGTaGTCTCTGAGTACCCAGGCTTCCTGGGGTCCCTGT +
Preference number: 6 (lower is better)
Translates to: LLSNNSRRCYER*SLSTQASWGPC
Trigger: ACAGGGACCCCAGGAAGCCTGGGTACTCAGAGAGCACCTTTCATAACAGCGTCTGCTATTATTACTCAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS CCA 72 bp ACTATGGGGGAGGAGGTCCTGGTATGGAGCAGACATTaGGTGTTGCTTTTGAGTAATAATAGCAGACGCTGT +
Preference number: 6 (lower is better)
Translates to: TMGEEVLVWSRH*VLLLSNNSRRC
Trigger: ACAGCGTCTGCTATTATTACTCAAAAGCAACACCCAATGTCTGCTCCATACCAGGACCTCCTCCCCCATAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS CCA 72 bp TCCGCAGCAATGATAGGCCACTTGAATTTGGGGTCTTaGTGGATGGAGACTACCTTCTCATCCAAAGATGTG +
Preference number: 6 (lower is better)
Translates to: SAAMIGHLNLGS*WMETTFSSKDV
Trigger: CACATCTTTGGATGAGAAGGTAGTCTCCATCCACCAAGACCCCAAATTCAAGTGGCCTATCATTGCTGCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CAA 72 bp ATCCATGCCCCTGTCAATGGCAGTGATTTGCTCATCTaGCGAGGAGGCAAAGTTGATGTGATTCTCCAACAG +
Preference number: 6 (lower is better)
Translates to: IHAPVNGSDLLI*RGGKVDVILQQ
Trigger: CTGTTGGAGAATCACATCAACTTTGCCTCCTCGCAAGATGAGCAAATCACTGCCATTGACAGGGGCATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CAA 90 bp ATGGGGGAGGAGGTCCTGGTATGGAGCAGACATTGGGTGTTGCTTTaGAGTAATAATAGCAGACGCTGTTATGAAAGGTGCTCTCTGAGT +
Preference number: 6 (lower is better)
Translates to: MGEEVLVWSRHWVLL*SNNSRRCYERCSLS
Trigger: ACTCAGAGAGCACCTTTCATAACAGCGTCTGCTATTATTACTCAAAAGCAACACCCAATGTCTGCTCCATACCAGGACCTCCTCCCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS CAA 90 bp TCCTTCTGTTTCCGCAGCAATGATAGGCCACTTGAATTTGGGGTCTaGGTGGATGGAGACTACCTTCTCATCCAAAGATGTGGCCATCAA +
Preference number: 6 (lower is better)
Translates to: SFCFRSNDRPLEFGV*VDGDYLLIQRCGHQ
Trigger: TTGATGGCCACATCTTTGGATGAGAAGGTAGTCTCCATCCACCAAGACCCCAAATTCAAGTGGCCTATCATTGCTGCGGAAACAGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CAA 90 bp CTTACTATGGGGGAGGAGGTCCTGGTATGGAGCAGACATTGGGTGTaGCTTTTGAGTAATAATAGCAGACGCTGTTATGAAAGGTGCTCT +
Preference number: 6 (lower is better)
Translates to: LTMGEEVLVWSRHWV*LLSNNSRRCYERCS
Trigger: AGAGCACCTTTCATAACAGCGTCTGCTATTATTACTCAAAAGCAACACCCAATGTCTGCTCCATACCAGGACCTCCTCCCCCATAGTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS CAA 90 bp ACTCCCAACAAAGCATACATCCCAATTTCTAAGTCGCTCAGCCCTTaGGATGCCTGCATAAGGTCATTCCCATCCATTTCCCCATTGCTT +
Preference number: 6 (lower is better)
Translates to: TPNKAYIPISKSLSP*DACIRSFPSISPLL
Trigger: AAGCAATGGGGAAATGGATGGGAATGACCTTATGCAGGCATCCAAAGGGCTGAGCGACTTAGAAATTGGGATGTATGCTTTGTTGGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CAA 72 bp GGGGAGGAGGTCCTGGTATGGAGCAGACATTGGGTGTaGCTTTTGAGTAATAATAGCAGACGCTGTTATGAA +
Preference number: 6 (lower is better)
Translates to: GEEVLVWSRHWV*LLSNNSRRCYE
Trigger: TTCATAACAGCGTCTGCTATTATTACTCAAAAGCAACACCCAATGTCTGCTCCATACCAGGACCTCCTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS CAA 72 bp TTCCGCAGCAATGATAGGCCACTTGAATTTGGGGTCTaGGTGGATGGAGACTACCTTCTCATCCAAAGATGT +
Preference number: 6 (lower is better)
Translates to: FRSNDRPLEFGV*VDGDYLLIQRC
Trigger: ACATCTTTGGATGAGAAGGTAGTCTCCATCCACCAAGACCCCAAATTCAAGTGGCCTATCATTGCTGCGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CAA 72 bp TTCACTAATAACCATTTCCACCTTGACCAGGGTGCCTaGTCCTTCTGTTTCCGCAGCAATGATAGGCCACTT +
Preference number: 6 (lower is better)
Translates to: FTNNHFHLDQGA*SFCFRSNDRPL
Trigger: AAGTGGCCTATCATTGCTGCGGAAACAGAAGGACAAGGCACCCTGGTCAAGGTGGAAATGGTTATTAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CAA 72 bp TTCCTCGAAATCCATGCCCCTGTCAATGGCAGTGATTaGCTCATCTTGCGAGGAGGCAAAGTTGATGTGATT +
Preference number: 6 (lower is better)
Translates to: FLEIHAPVNGSD*LILRGGKVDVI
Trigger: AATCACATCAACTTTGCCTCCTCGCAAGATGAGCAAATCACTGCCATTGACAGGGGCATGGATTTCGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CAA 90 bp CTGTCACTGGTGTTGGGGTTAGCATCGTTTTGGCCAAATTTAACTTaGATGTTTGCCGTTCCAACAGCTAACACACTCTTCCGCTTGGAT +
Preference number: 6 (lower is better)
Translates to: LSLVLGLASFWPNLT*MFAVPTANTLFRLD
Trigger: ATCCAAGCGGAAGAGTGTGTTAGCTGTTGGAACGGCAAACATCAAAGTTAAATTTGGCCAAAACGATGCTAACCCCAACACCAGTGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS TCA 72 bp TGTTTTCTGAGCCAGCTGCTTTCTTCTGACAAACGATaGCAGCTGGTGCATACTTTCCAGTATAATCCGTGC +
Preference number: 6 (lower is better)
Translates to: CFLSQLLSSDKR*QLVHTFQYNPC
Trigger: GCACGGATTATACTGGAAAGTATGCACCAGCTGTCATCGTTTGTCAGAAGAAAGCAGCTGGCTCAGAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422113.7
CDS CCA 72 bp GTTCCAACAGCTAACACACTCTTCCGCTTGGATTTCTaGCAGGATTCACTAATAACCATTTCCACCTTGACC +
Preference number: 6 (lower is better)
Translates to: VPTANTLFRLDF*QDSLITISTLT
Trigger: GGTCAAGGTGGAAATGGTTATTAGTGAATCCTGCCAGAAATCCAAGCGGAAGAGTGTGTTAGCTGTTGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CAA 72 bp GAGGTCCTGGTATGGAGCAGACATTGGGTGTTGCTTTaGAGTAATAATAGCAGACGCTGTTATGAAAGGTGC +
Preference number: 6 (lower is better)
Translates to: EVLVWSRHWVLL*SNNSRRCYERC
Trigger: GCACCTTTCATAACAGCGTCTGCTATTATTACTCAAAAGCAACACCCAATGTCTGCTCCATACCAGGACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS CAA 72 bp AAAGCATACATCCCAATTTCTAAGTCGCTCAGCCCTTaGGATGCCTGCATAAGGTCATTCCCATCCATTTCC +
Preference number: 6 (lower is better)
Translates to: KAYIPISKSLSP*DACIRSFPSIS
Trigger: GGAAATGGATGGGAATGACCTTATGCAGGCATCCAAAGGGCTGAGCGACTTAGAAATTGGGATGTATGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CAA 90 bp ATATTTACTTTCCTCGAAATCCATGCCCCTGTCAATGGCAGTGATTaGCTCATCTTGCGAGGAGGCAAAGTTGATGTGATTCTCCAACAG +
Preference number: 6 (lower is better)
Translates to: IFTFLEIHAPVNGSD*LILRGGKVDVILQQ
Trigger: CTGTTGGAGAATCACATCAACTTTGCCTCCTCGCAAGATGAGCAAATCACTGCCATTGACAGGGGCATGGATTTCGAGGAAAGTAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS TCA 72 bp AGGTCCTGGTATGGAGCAGACATTGGGTGTTGCTTTTaGGTAATAATAGCAGACGCTGTTATGAAAGGTGCT +
Preference number: 6 (lower is better)
Translates to: RSWYGADIGCCF*VIIADAVMKGA
Trigger: AGCACCTTTCATAACAGCGTCTGCTATTATTACTCAAAAGCAACACCCAATGTCTGCTCCATACCAGGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389441.8
CDS CAA 90 bp TTAACTTTGATGTTTGCCGTTCCAACAGCTAACACACTCTTCCGCTaGGATTTCTGGCAGGATTCACTAATAACCATTTCCACCTTGACC +
Preference number: 6 (lower is better)
Translates to: LTLMFAVPTANTLFR*DFWQDSLITISTLT
Trigger: GGTCAAGGTGGAAATGGTTATTAGTGAATCCTGCCAGAAATCCAAGCGGAAGAGTGTGTTAGCTGTTGGAACGGCAAACATCAAAGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CAA 72 bp GTGTTGGGGTTAGCATCGTTTTGGCCAAATTTAACTTaGATGTTTGCCGTTCCAACAGCTAACACACTCTTC +
Preference number: 6 (lower is better)
Translates to: VLGLASFWPNLT*MFAVPTANTLF
Trigger: GAAGAGTGTGTTAGCTGTTGGAACGGCAAACATCAAAGTTAAATTTGGCCAAAACGATGCTAACCCCAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389441.8
ENST00000422113.7
CDS CAA 90 bp TTTAGTTTCCAGTTAAGAGAAAATTTGTTGGTGAATCCAAATGGGTaGGAAGGTAGCATTAAATCCTGGGGCACCACTTGCTCGATGGAG +
Preference number: 6 (lower is better)
Translates to: FSFQLRENLLVNPNG*EGSIKSWGTTCSME
Trigger: CTCCATCGAGCAAGTGGTGCCCCAGGATTTAATGCTACCTTCCAACCCATTTGGATTCACCAACAAATTTTCTCTTAACTGGAAACTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422113.7