RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM132B (Homo sapiens)

Ensembl gene IDs: ENSG00000139364

Ensembl transcript IDs: ENST00000299308.7, ENST00000534945.2, ENST00000535330.1, ENST00000535886.2, ENST00000613307.1, ENST00000682704.1

Found 723 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTCTGCCCTCTACTGCAGCACATCTGGACCCTGGAGGCAGCGGTTaGAATCCTCAATGGTTCCAGGTCATACGCTGGTCGTCTAGCATC +
Preference number: 1 (lower is better)
Translates to: ALPSTAAHLDPGGSG*NPQWFQVIRWSSSI
Trigger: GATGCTAGACGACCAGCGTATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCTGCAGTAGAGGGCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR GCA 90 bp ACACTACAGTCCTGTGGGCCAGAGATACAGGAAGAACTTTTTGGCTaGCACGTCATGGCTAGAGGAGGCGGGGTTGTCATGTTCCCACCC +
Preference number: 1 (lower is better)
Translates to: TLQSCGPEIQEELFG*HVMARGGGVVMFPP
Trigger: GGGTGGGAACATGACAACCCCGCCTCCTCTAGCCATGACGTGGCAGCCAAAAAGTTCTTCCTGTATCTCTGGCCCACAGGACTGTAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CCA 90 bp TGTCCCCACTGTTTGCTGCCTTGCAATCACCCCAAAGCACACTACTaGCTGGGCTGTGTAGGTTTGGCCACTCACTATGTTCTGCAGCTG +
Preference number: 1 (lower is better)
Translates to: CPHCLLPCNHPKAHY*LGCVGLATHYVLQL
Trigger: CAGCTGCAGAACATAGTGAGTGGCCAAACCTACACAGCCCAGCCAGTAGTGTGCTTTGGGGTGATTGCAAGGCAGCAAACAGTGGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 90 bp GTCACAAGAAGCATCTTCAGGACTGTGGCCAGTTTCCAGCCCTGCTaGGAAACCACTGGCATGTTTGAACGCTCCCCAGTTTGTTCCCTG +
Preference number: 1 (lower is better)
Translates to: VTRSIFRTVASFQPC*ETTGMFERSPVCSL
Trigger: CAGGGAACAAACTGGGGAGCGTTCAAACATGCCAGTGGTTTCTCAGCAGGGCTGGAAACTGGCCACAGTCCTGAAGATGCTTCTTGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 90 bp CTTGGCAATCAAGTCCCTCCATGGGCCAGTTCATCTTTGGGCATGTaGACTGGTGGCTCTGGGGTAATTCACTGCACTGCAGCAACTGAG +
Preference number: 1 (lower is better)
Translates to: LGNQVPPWASSSLGM*TGGSGVIHCTAATE
Trigger: CTCAGTTGCTGCAGTGCAGTGAATTACCCCAGAGCCACCAGTTCACATGCCCAAAGATGAACTGGCCCATGGAGGGACTTGATTGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 90 bp CATGTGAACTGGTGGCTCTGGGGTAATTCACTGCACTGCAGCAACTaGGATGGCAATATGTCCGATGGACATTTCCAGGTGTGCCCGATG +
Preference number: 1 (lower is better)
Translates to: HVNWWLWGNSLHCSN*DGNMSDGHFQVCPM
Trigger: CATCGGGCACACCTGGAAATGTCCATCGGACATATTGCCATCTCAGTTGCTGCAGTGCAGTGAATTACCCCAGAGCCACCAGTTCACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 90 bp TGCAATCCTCAATGGTTCCAGGTCATACGCTGGTCGTCTAGCATCTaGACCTCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTT +
Preference number: 1 (lower is better)
Translates to: CNPQWFQVIRWSSSI*TSLHVTTEFTVWCL
Trigger: AAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGAGGTTCAGATGCTAGACGACCAGCGTATGACCTGGAACCATTGAGGATTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR GCA 90 bp GCTGAGAAACCACTGGCATGTTTGAACGCTCCCCAGTTTGTTCCCTaGACCCCGTCAAGCACTGCCATCAGAGGGAATGCTCTAATTTTT +
Preference number: 1 (lower is better)
Translates to: AEKPLACLNAPQFVP*TPSSTAIRGNALIF
Trigger: AAAAATTAGAGCATTCCCTCTGATGGCAGTGCTTGACGGGGTGCAGGGAACAAACTGGGGAGCGTTCAAACATGCCAGTGGTTTCTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 90 bp TGGGTTTTAACACAGAGGAGCAAAGGCGGCTACACAGGAGCTGTGTaGCTCCCAGTGACTCTAAGTTGTCACAAGAAGCATCTTCAGGAC +
Preference number: 1 (lower is better)
Translates to: WVLTQRSKGGYTGAV*LPVTLSCHKKHLQD
Trigger: GTCCTGAAGATGCTTCTTGTGACAACTTAGAGTCACTGGGAGTCACACAGCTCCTGTGTAGCCGCCTTTGCTCCTCTGTGTTAAAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CCA 90 bp ATCACTTGCAATTTCAGCACTGTTCCCAAACACACTACAGTCCTGTaGGCCAGAGATACAGGAAGAACTTTTTGGCTGCCACGTCATGGC +
Preference number: 1 (lower is better)
Translates to: ITCNFSTVPKHTTVL*ARDTGRTFWLPRHG
Trigger: GCCATGACGTGGCAGCCAAAAAGTTCTTCCTGTATCTCTGGCCCACAGGACTGTAGTGTGTTTGGGAACAGTGCTGAAATTGCAAGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CCA 90 bp TCAGCTTCGGTTCCTAAGCCCCATTTTATACAACTAACTGAACGCTaGGCTCTGGAGGTCAGGCCTACATCACTTGCAATTTCAGCACTG +
Preference number: 1 (lower is better)
Translates to: SASVPKPHFIQLTER*ALEVRPTSLAISAL
Trigger: CAGTGCTGAAATTGCAAGTGATGTAGGCCTGACCTCCAGAGCCCAGCGTTCAGTTAGTTGTATAAAATGGGGCTTAGGAACCGAAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CCA 90 bp AAGGGAGAGACGATTGAAAAGCCTCATAGAAGGAGCCGACTCACCTaGATAGCTATGTGTCAATCAGCACATGAGCTTTCTTCGGTCCTG +
Preference number: 1 (lower is better)
Translates to: KGETIEKPHRRSRLT*IAMCQSAHELSSVL
Trigger: CAGGACCGAAGAAAGCTCATGTGCTGATTGACACATAGCTATCCAGGTGAGTCGGCTCCTTCTATGAGGCTTTTCAATCGTCTCTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 90 bp TGTCAATCAGCACATGAGCTTTCTTCGGTCCTGGATGGTTGGCTCTaGGCTACCTCTGCACCAAACTCTTTGAAAAGCTTTTGGCTGACT +
Preference number: 1 (lower is better)
Translates to: CQSAHELSSVLDGWL*ATSAPNSLKSFWLT
Trigger: AGTCAGCCAAAAGCTTTTCAAAGAGTTTGGTGCAGAGGTAGCTCAGAGCCAACCATCCAGGACCGAAGAAAGCTCATGTGCTGATTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 90 bp TGTGAGACTGAACAGTTCCCTCACAGAGCCTTAATAATAGTTCTCTaGCAGGGCCCCGACATCCCAGTAATGGGAAGACCCCTTTCTAAA +
Preference number: 1 (lower is better)
Translates to: CETEQFPHRALIIVL*QGPDIPVMGRPLSK
Trigger: TTTAGAAAGGGGTCTTCCCATTACTGGGATGTCGGGGCCCTGTCAGAGAACTATTATTAAGGCTCTGTGAGGGAACTGTTCAGTCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 90 bp CTATGTTCTGCAGCTGAGATCCGGTCCACCTGCCTGAGAAGAGTCTaGGGCTGGGAACTGATACCTAAGATGCACATTTCAATTTTGAGA +
Preference number: 1 (lower is better)
Translates to: LCSAAEIRSTCLRRV*GWELIPKMHISILR
Trigger: TCTCAAAATTGAAATGTGCATCTTAGGTATCAGTTCCCAGCCTCAGACTCTTCTCAGGCAGGTGGACCGGATCTCAGCTGCAGAACATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 90 bp ATTAGCTCAGTTATCAGCCATTTGGAGTCAGGGCACTGCTTCAGGTaGCCCCCTGCAGATCCTTCCTACTTTGGGCCTTTAAAATCATAT +
Preference number: 1 (lower is better)
Translates to: ISSVISHLESGHCFR*PPADPSYFGPLKSY
Trigger: ATATGATTTTAAAGGCCCAAAGTAGGAAGGATCTGCAGGGGGTCACCTGAAGCAGTGCCCTGACTCCAAATGGCTGATAACTGAGCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 90 bp TTGCAGCTAATGCCTGGCTCTCCTTGCTTCCTTATCCCATCAAACTaGACTACTTTTGGAACTTCATCAGCTTCGGTTCCTAAGCCCCAT +
Preference number: 1 (lower is better)
Translates to: LQLMPGSPCFLIPSN*TTFGTSSASVPKPH
Trigger: ATGGGGCTTAGGAACCGAAGCTGATGAAGTTCCAAAAGTAGTTCAGTTTGATGGGATAAGGAAGCAAGGAGAGCCAGGCATTAGCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CCA 90 bp AAAGTGTCAGCCATCTCTCTGCAAGCTCCTTTTGCAGCTAATGCCTaGCTCTCCTTGCTTCCTTATCCCATCAAACTGAACTACTTTTGG +
Preference number: 1 (lower is better)
Translates to: KVSAISLQAPFAANA*LSLLPYPIKLNYFW
Trigger: CCAAAAGTAGTTCAGTTTGATGGGATAAGGAAGCAAGGAGAGCCAGGCATTAGCTGCAAAAGGAGCTTGCAGAGAGATGGCTGACACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 90 bp AGAGATTTCCTCCCCGTTTCAGCGGAGGTTCATCATTTTCAGAAATaGATTCCCAGTCTTTCTGGAATGCCAGAGATCCAAAGGGAGAGA +
Preference number: 1 (lower is better)
Translates to: RDFLPVSAEVHHFQK*IPSLSGMPEIQRER
Trigger: TCTCTCCCTTTGGATCTCTGGCATTCCAGAAAGACTGGGAATTCATTTCTGAAAATGATGAACCTCCGCTGAAACGGGGAGGAAATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR GCA 90 bp AGTTATCAGCCATTTGGAGTCAGGGCACTGCTTCAGGTGACCCCCTaGAGATCCTTCCTACTTTGGGCCTTTAAAATCATATTTCTTAGA +
Preference number: 1 (lower is better)
Translates to: SYQPFGVRALLQVTP*RSFLLWAFKIIFLR
Trigger: TCTAAGAAATATGATTTTAAAGGCCCAAAGTAGGAAGGATCTGCAGGGGGTCACCTGAAGCAGTGCCCTGACTCCAAATGGCTGATAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CCA 90 bp AGCTGCTTCTTGAGTTCTGGAATAGTCATTTATTTGTATGGATTTTaGGGGGAAACCCACTGCTTCTCTCCACAAATGCACACCCTTGTC +
Preference number: 1 (lower is better)
Translates to: SCFLSSGIVIYLYGF*GETHCFSPQMHTLV
Trigger: GACAAGGGTGTGCATTTGTGGAGAGAAGCAGTGGGTTTCCCCCCAAAATCCATACAAATAAATGACTATTCCAGAACTCAAGAAGCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CCA 90 bp AACTGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATaGCATGGCAAATCCCAGGGAAGAAAACTCATGTGTAAATCAAAC +
Preference number: 1 (lower is better)
Translates to: NWKNLTSCMETQEIT*HGKSQGRKLMCKSN
Trigger: GTTTGATTTACACATGAGTTTTCTTCCCTGGGATTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR GCA 90 bp CTTAATTCTCCACTCTCAGCCTTTCATAGTTATGGTGTTTGCTTATaGCCACAAATAATGTGTGGGGAATACCTAGAAGACCCCTGTAAT +
Preference number: 1 (lower is better)
Translates to: LNSPLSAFHSYGVCL*PQIMCGEYLEDPCN
Trigger: ATTACAGGGGTCTTCTAGGTATTCCCCACACATTATTTGTGGGCATAAGCAAACACCATAACTATGAAAGGCTGAGAGTGGAGAATTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 90 bp ACAGGTGCAGGTGCAAATGTATATAAAAATAATGAGCAGCGCTCATaGCAAATCAGGATAGCTACATTCAGTCATCTTTCATGTATGTCT +
Preference number: 1 (lower is better)
Translates to: TGAGANVYKNNEQRS*QIRIATFSHLSCMS
Trigger: AGACATACATGAAAGATGACTGAATGTAGCTATCCTGATTTGTCATGAGCGCTGCTCATTATTTTTATATACATTTGCACCTGCACCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CAA 90 bp GGACTGTGGCCAGTTTCCAGCCCTGCTGAGAAACCACTGGCATGTTaGAACGCTCCCCAGTTTGTTCCCTGCACCCCGTCAAGCACTGCC +
Preference number: 2 (lower is better)
Translates to: GLWPVSSPAEKPLAC*NAPQFVPCTPSSTA
Trigger: GGCAGTGCTTGACGGGGTGCAGGGAACAAACTGGGGAGCGTTCAAACATGCCAGTGGTTTCTCAGCAGGGCTGGAAACTGGCCACAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CAA 90 bp CCTTGCAATCACCCCAAAGCACACTACTGGCTGGGCTGTGTAGGTTaGGCCACTCACTATGTTCTGCAGCTGAGATCCGGTCCACCTGCC +
Preference number: 2 (lower is better)
Translates to: PCNHPKAHYWLGCVG*ATHYVLQLRSGPPA
Trigger: GGCAGGTGGACCGGATCTCAGCTGCAGAACATAGTGAGTGGCCAAACCTACACAGCCCAGCCAGTAGTGTGCTTTGGGGTGATTGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATCCCTCAGCAGGAGTCTaGGCATTCCATTCCCATGGG +
Preference number: 2 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHPSAGV*AFHSHG
Trigger: CCCATGGGAATGGAATGCTCAGACTCCTGCTGAGGG...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATCTGGATGGTTGGCTCTaGGCTACCTCTGCACCAAAC +
Preference number: 2 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHLDGWL*ATSAPN
Trigger: GTTTGGTGCAGAGGTAGCTCAGAGCCAACCATCCAG...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTCCCCAGTTTGTTCCCTaGACCCCGTCAAGCACTGCC +
Preference number: 2 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAPQFVP*TPSSTA
Trigger: GGCAGTGCTTGACGGGGTGCAGGGAACAAACTGGGG...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTCTGAACGCTGGGCTCTaGAGGTCAGGCCTACATCAC +
Preference number: 2 (lower is better)
Translates to: QQRASSPSRHLASVPPIFLNAGL*RSGLHH
Trigger: GTGATGTAGGCCTGACCTCCAGAGCCCAGCGTTCAG...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTGAAAGCTCAGCACCCTaGGCCCAGTACAAAGCCCCT +
Preference number: 2 (lower is better)
Translates to: QQRASSPSRHLASVPPIFESSAP*AQYKAP
Trigger: AGGGGCTTTGTACTGGGCCCAGGGTGCTGAGCTTTC...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTCTGGATGGTTGGCTCTaGGCTACCTCTGCACCAAAC +
Preference number: 2 (lower is better)
Translates to: QQRASSPSRHLASVPPIFLDGWL*ATSAPN
Trigger: GTTTGGTGCAGAGGTAGCTCAGAGCCAACCATCCAG...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATCCCCAGTTTGTTCCCTaGACCCCGTCAAGCACTGCC +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDPQFVP*TPSSTA
Trigger: GGCAGTGCTTGACGGGGTGCAGGGAACAAACTGGGG...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTCCTTCTCAAGAGGCTTaGTGGTGTCTCCCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: QQRASSPSRHLASVPPIFPSQEA*WCLPQQ
Trigger: CTGCTGAGGGAGACACCAGCAAGCCTCTTGAGAAGG...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTCCTGGAGGCAGCGGTTaGAATCCTCAATGGTTCCAG +
Preference number: 2 (lower is better)
Translates to: QQRASSPSRHLASVPPIFPGGSG*NPQWFQ
Trigger: CTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGG...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATGTCTCACTTTACCAGTaGGCAGGACCCTGCTGTATG +
Preference number: 2 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHVSLYQ*AGPCCM
Trigger: CATACAGCAGGGTCCTGCCCACTGGTAAAGTGAGAC...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CAA 90 bp CAAACACACTACAGTCCTGTGGGCCAGAGATACAGGAAGAACTTTTaGGCTGCCACGTCATGGCTAGAGGAGGCGGGGTTGTCATGTTCC +
Preference number: 2 (lower is better)
Translates to: QTHYSPVGQRYRKNF*AATSWLEEAGLSCS
Trigger: GGAACATGACAACCCCGCCTCCTCTAGCCATGACGTGGCAGCCAAAAAGTTCTTCCTGTATCTCTGGCCCACAGGACTGTAGTGTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CAA 90 bp CAAAGGCGGCTACACAGGAGCTGTGTGACTCCCAGTGACTCTAAGTaGTCACAAGAAGCATCTTCAGGACTGTGGCCAGTTTCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: QRRLHRSCVTPSDSK*SQEASSGLWPVSSP
Trigger: AGGGCTGGAAACTGGCCACAGTCCTGAAGATGCTTCTTGTGACAACTTAGAGTCACTGGGAGTCACACAGCTCCTGTGTAGCCGCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATGTGTCAATCAGCACATaGGCTTTCTTCGGTCCTGGA +
Preference number: 2 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHVSIST*AFFGPG
Trigger: TCCAGGACCGAAGAAAGCTCATGTGCTGATTGACAC...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTCTTGTAGGGTTCAGATaGAACCACGCTCTGTGGTCC +
Preference number: 2 (lower is better)
Translates to: QQRASSPSRHLASVPPIFLVGFR*NHALWS
Trigger: GGACCACAGAGCGTGGTTTCATCTGAACCCTACAAG...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTGCTCTGCCCTCTACTaGAGCACATCTGGACCCTGG +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDCSALY*STSGPW
Trigger: CCAGGGTCCAGATGTGCTGCAGTAGAGGGCAGAGCA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTTTCTTCGGTCCTGGATaGTTGGCTCTGAGCTACCTC +
Preference number: 2 (lower is better)
Translates to: QQRASSPSRHLASVPPIFFFGPG*LALSYL
Trigger: GAGGTAGCTCAGAGCCAACCATCCAGGACCGAAGAA...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATTTAATACATTTGCACTaGGCTCGTACCAGGCAGTCC +
Preference number: 2 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHLIHLH*ARTRQS
Trigger: GGACTGCCTGGTACGAGCTCAGTGCAAATGTATTAA...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATCCATTTGTCACGAGATaGCTAACAATGTCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHPFVTR*LTMSVG
Trigger: CCCCACAGACATTGTTAGTCATCTCGTGACAAATGG...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGGGGCACTGCTTCAGGTaGCCCCCTGCAGATCCTTCC +
Preference number: 2 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMGHCFR*PPADPS
Trigger: GGAAGGATCTGCAGGGGGTCACCTGAAGCAGTGCCC...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTGAGTTCACTGTCTGGTaGCTTCTCAAGAGGCTTGCT +
Preference number: 2 (lower is better)
Translates to: QQRASSPSRHLASVPPIFEFTVW*LLKRLA
Trigger: AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTC...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTACGCTCTGTGGTCCTTaGTGTGAGACTGAACAGTTC +
Preference number: 2 (lower is better)
Translates to: QQRASSPSRHLASVPPIFTLCGP*CETEQF
Trigger: GAACTGTTCAGTCTCACAGCAAGGACCACAGAGCGT...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATCTGAACGCCTCTCCTTaGATTAGCTCAGTTATCAGC +
Preference number: 2 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHLNASP*ISSVIS
Trigger: GCTGATAACTGAGCTAATCCAAGGAGAGGCGTTCAG...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATCAACTAACTGAACGCTaGGCTCTGGAGGTCAGGCCT +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDQLTER*ALEVRP
Trigger: AGGCCTGACCTCCAGAGCCCAGCGTTCAGTTAGTTG...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTGTGTGGGTTATATGGTaGAAGGAACCCTTCCCCCAT +
Preference number: 2 (lower is better)
Translates to: QQRASSPSRHLASVPPIFVWVIW*KEPFPH
Trigger: ATGGGGGAAGGGTTCCTTCCACCATATAACCCACAC...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTGGTTGCAATCCTCAATaGTTCCAGGTCATACGCTGG +
Preference number: 2 (lower is better)
Translates to: QQRASSPSRHLASVPPIFGCNPQ*FQVIRW
Trigger: CCAGCGTATGACCTGGAACCATTGAGGATTGCAACC...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATCTTGTAGGGTTCAGATaGAACCACGCTCTGTGGTCC +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDLVGFR*NHALWS
Trigger: GGACCACAGAGCGTGGTTTCATCTGAACCCTACAAG...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATCCCTGGACGGGGCCATaGGAAACAGGAGATCTTTTT +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDPWTGP*ETGDLF
Trigger: AAAAAGATCTCCTGTTTCTCATGGCCCCGTCCAGGG...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATCTGGTCTCAAACTCCTaGCTTCAGGTGATCTGCCCA +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDLVSNS*LQVICP
Trigger: TGGGCAGATCACCTGAAGTCAGGAGTTTGAGACCAG...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTCCAGTCTTTCTGGAATaGCAGAGATCCAAAGGGAGA +
Preference number: 2 (lower is better)
Translates to: QQRASSPSRHLASVPPIFPVFLE*QRSKGR
Trigger: TCTCCCTTTGGATCTCTGGCATTCCAGAAAGACTGG...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTTCTTCGGTCCTGGATaGTTGGCTCTGAGCTACCTC +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDFFGPG*LALSYL
Trigger: GAGGTAGCTCAGAGCCAACCATCCAGGACCGAAGAA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATGTCTCACTTTACCAGTaGGCAGGACCCTGCTGTATG +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDVSLYQ*AGPCCM
Trigger: CATACAGCAGGGTCCTGCCCACTGGTAAAGTGAGAC...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATAGCATTCCATTCCCATaGGAGAGGAAGGGACTTTAT +
Preference number: 2 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHSIPFP*ERKGLY
Trigger: ATAAAGTCCCTTCCTCTCCCATGGGAATGGAATGCT...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTACAGAGTTCACTGTCTaGTGCCTTCTCAAGAGGCTT +
Preference number: 2 (lower is better)
Translates to: QQRASSPSRHLASVPPIFTEFTV*CLLKRL
Trigger: AAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGT...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATAGAAGGCTGAGTGCCTaGGCCAGTGTGCTTATCAGT +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDRRLSA*ASVLIS
Trigger: ACTGATAAGCACACTGGCCCAGGCACTCAGCCTTCT...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTCCATTTGTCACGAGATaGCTAACAATGTCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAPFVTR*LTMSVG
Trigger: CCCCACAGACATTGTTAGTCATCTCGTGACAAATGG...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTAAAACTGGAAAAACCTaGCATCCTGCATGGAGACCC +
Preference number: 2 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAKTGKT*HPAWRP
Trigger: GGGTCTCCATGCAGGATGTCAGGTTTTTCCAGTTTT...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTACACAGGAGCTGTGTaGCTCCCAGTGACTCTAAGT +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDYTGAV*LPVTLS
Trigger: ACTTAGAGTCACTGGGAGTCACACAGCTCCTGTGTA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTTGTCAGCCATCTCTCTaGAAGCTCCTTTTGCAGCTA +
Preference number: 2 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLACQPSL*KLLLQL
Trigger: TAGCTGCAAAAGGAGCTTGCAGAGAGATGGCTGACA...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTACCCAGGAAATAACATaGCATGGCAAATCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLATQEIT*HGKSQG
Trigger: TCCCTGGGATTTGCCATGCCATGTTATTTCCTGGGT...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTAGGAGCCGACTCACCTaGATAGCTATGTGTCAATCA +
Preference number: 2 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLARSRLT*IAMCQS
Trigger: TGATTGACACATAGCTATCCAGGTGAGTCGGCTCCT...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATGCGTTTATATACATCTaGGTGTGGGTTATATGGTGG +
Preference number: 2 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHAFIYI*VWVIWW
Trigger: CCACCATATAACCCACACCCAGATGTATATAAACGC...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATGCAGTGGTACGATCTTaGCTCACTACAACCTTCACC +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDAVVRS*LTTTFT
Trigger: GGTGAAGGTTGTAGTGAGCCAAGATCGTACCACTGC...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTTACCGTCCCTTTACATaGCAGGTGATATGCATTACA +
Preference number: 2 (lower is better)
Translates to: QQRASSPSRHLASVPPIFYRPFT*QVICIT
Trigger: TGTAATGCATATCACCTGTCATGTAAAGGGACGGTA...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTCTTGGAATCCACACTaGATGCCCTTGCTAGAAGTC +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDSWNPH*MPLLEV
Trigger: GACTTCTAGCAAGGGCATTCAGTGTGGATTCCAAGA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATCAAACCTCTTTTACCTaGTTAGAAATGAATCCCACC +
Preference number: 2 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHQTSFT*LEMNPT
Trigger: GGTGGGATTCATTTCTAAGCAGGTAAAAGAGGTTTG...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATCAGGCCTACATCACTTaGAATTTCAGCACTGTTCCC +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDQAYIT*NFSTVP
Trigger: GGGAACAGTGCTGAAATTGCAAGTGATGTAGGCCTG...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATAAAACAGTAAAGAGATaGCCCTCCCTCACTGTATAT +
Preference number: 2 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHKTVKR*PSLTVY
Trigger: ATATACAGTGAGGGAGGGCCATCTCTTTACTGTTTT...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTTATTTGTATGGATTTTaGGGGGAAACCCACTGCTTC +
Preference number: 2 (lower is better)
Translates to: QQRASSPSRHLASVPPIFYLYGF*GETHCF
Trigger: GAAGCAGTGGGTTTCCCCCCAAAATCCATACAAATA...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTAGCATTCCATTCCCATaGGAGAGGAAGGGACTTTAT +
Preference number: 2 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLASIPFP*ERKGLY
Trigger: ATAAAGTCCCTTCCTCTCCCATGGGAATGGAATGCT...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATACAGAGTTCACTGTCTaGTGCCTTCTCAAGAGGCTT +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDTEFTV*CLLKRL
Trigger: AAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGT...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATAATGAGCAGCGCTCATaGCAAATCAGGATAGCTACA +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDNEQRS*QIRIAT
Trigger: TGTAGCTATCCTGATTTGTCATGAGCGCTGCTCATT...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTTTTATACAACTAACTaGACGCTGGGCTCTGGAGGT +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDFYTTN*TLGSGG
Trigger: ACCTCCAGAGCCCAGCGTTCAGTTAGTTGTATAAAA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTCAAACCTCTTTTACCTaGTTAGAAATGAATCCCACC +
Preference number: 2 (lower is better)
Translates to: QQRASSPSRHLASVPPIFQTSFT*LEMNPT
Trigger: GGTGGGATTCATTTCTAAGCAGGTAAAAGAGGTTTG...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTATATACATCTGGGTGTaGGTTATATGGTGGAAGGAA +
Preference number: 2 (lower is better)
Translates to: QQRASSPSRHLASVPPIFIYIWV*VIWWKE
Trigger: TTCCTTCCACCATATAACCCACACCCAGATGTATAT...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CAA 90 bp GCCATCTCTCTGCAAGCTCCTTTTGCAGCTAATGCCTGGCTCTCCTaGCTTCCTTATCCCATCAAACTGAACTACTTTTGGAACTTCATC +
Preference number: 2 (lower is better)
Translates to: AISLQAPFAANAWLS*LPYPIKLNYFWNFI
Trigger: GATGAAGTTCCAAAAGTAGTTCAGTTTGATGGGATAAGGAAGCAAGGAGAGCCAGGCATTAGCTGCAAAAGGAGCTTGCAGAGAGATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAATTAATACATTTGCACTaGGCTCGTACCAGGCAGTCC +
Preference number: 2 (lower is better)
Translates to: WKNLTSCMETQEITWHGKLIHLH*ARTRQS
Trigger: GGACTGCCTGGTACGAGCTCAGTGCAAATGTATTAA...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTCTTATCCCATCAAACTaGACTACTTTTGGAACTTCA +
Preference number: 2 (lower is better)
Translates to: QQRASSPSRHLASVPPIFLIPSN*TTFGTS
Trigger: TGAAGTTCCAAAAGTAGTTCAGTTTGATGGGATAAG...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGAACCACTGGCATGTTTaGACGCTCCCCAGTTTGTTC +
Preference number: 2 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMNHWHV*TLPSLF
Trigger: GAACAAACTGGGGAGCGTTCAAACATGCCAGTGGTT...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGAGTTTCCAGCCCTGCTaGGAAACCACTGGCATGTTT +
Preference number: 2 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMSFQPC*ETTGMF
Trigger: AAACATGCCAGTGGTTTCTCAGCAGGGCTGGAAACT...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATACACATGGAGTATTCTaGGGTTTGCTAGGTGTTGTT +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDTHGVF*GLLGVV
Trigger: AACAACACCTAGCAAACCTCAGAATACTCCATGTGT...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTACCGTCCCTTTACATaGCAGGTGATATGCATTACA +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDYRPFT*QVICIT
Trigger: TGTAATGCATATCACCTGTCATGTAAAGGGACGGTA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATCCAGCATGCCAAAAATaGCTCTGCAGTTTCAAGAAA +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDPACQK*LCSFKK
Trigger: TTTCTTGAAACTGCAGAGTCATTTTTGGCATGCTGG...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATCCGGTCCACCTGCCTaGGAAGAGTCTGAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPSGPPA*EESEAG
Trigger: CCCAGCCTCAGACTCTTCTCAGGCAGGTGGACCGGA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTGTAATCTGCATCTATTaGCTAGGCAATTTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: QQRASSPSRHLASVPPIFVICIY*LGNFLS
Trigger: AGAAAGGAAATTGCCTAGGCAATAGATGCAGATTAC...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGAGCTTTCTTCGGTCCTaGATGGTTGGCTCTGAGCTA +
Preference number: 2 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMSFLRS*MVGSEL
Trigger: TAGCTCAGAGCCAACCATCCAGGACCGAAGAAAGCT...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGAAAACTGGAAAAACCTaGCATCCTGCATGGAGACCC +
Preference number: 2 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMKTGKT*HPAWRP
Trigger: GGGTCTCCATGCAGGATGTCAGGTTTTTCCAGTTTT...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTCATCATTTTCAGAAATaGATTCCCAGTCTTTCTGGA +
Preference number: 2 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAHHFQK*IPSLSG
Trigger: TCCAGAAAGACTGGGAATTCATTTCTGAAAATGATG...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACACTCCTGACTTCAGGTaGTCTGCCCACCTGGGCCTC +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNTPDFR*SAHLGL
Trigger: GAGGCCCAGGTGGGCAGATCACCTGAAGTCAGGAGT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTATGGTGTTTGCTTATaGCCACAAATAATGTGTGGG +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDYGVCL*PQIMCG
Trigger: CCCACACATTATTTGTGGGCATAAGCAAACACCATA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTGATAGTAAATTGTGTTaGCCACAAAGCACTTGTATA +
Preference number: 2 (lower is better)
Translates to: QQRASSPSRHLASVPPIFDSKLC*PQSTCI
Trigger: TATACAAGTGCTTTGTGGCCAACACAATTTACTATC...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTAAACTGAACTACTTTTaGAACTTCATCAGCTTCGGT +
Preference number: 2 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAKLNYF*NFISFG
Trigger: ACCGAAGCTGATGAAGTTCCAAAAGTAGTTCAGTTT...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGAGGAGCCGACTCACCTaGATAGCTATGTGTCAATCA +
Preference number: 2 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMRSRLT*IAMCQS
Trigger: TGATTGACACATAGCTATCCAGGTGAGTCGGCTCCT...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CAA 90 bp TGCCTGGCTCTCCTTGCTTCCTTATCCCATCAAACTGAACTACTTTaGGAACTTCATCAGCTTCGGTTCCTAAGCCCCATTTTATACAAC +
Preference number: 2 (lower is better)
Translates to: CLALLASLSHQTELL*ELHQLRFLSPILYN
Trigger: GTTGTATAAAATGGGGCTTAGGAACCGAAGCTGATGAAGTTCCAAAAGTAGTTCAGTTTGATGGGATAAGGAAGCAAGGAGAGCCAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCCCTCAGCAGGAGTCTaGGCATTCCATTCCCATGGG +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNPSAGV*AFHSHG
Trigger: CCCATGGGAATGGAATGCTCAGACTCCTGCTGAGGG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATATTGGGCATTTATTATaGCACGTCAAATTATCGCCA +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDIGHLL*HVKLSP
Trigger: TGGCGATAATTTGACGTGTCATAATAAATGCCCAAT...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATGTAATCTGCATCTATTaGCTAGGCAATTTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDVICIY*LGNFLS
Trigger: AGAAAGGAAATTGCCTAGGCAATAGATGCAGATTAC...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATAGAATGCTACCAAAATaGACAAAGGTGGACATTCTA +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDRMLPK*TKVDIL
Trigger: TAGAATGTCCACCTTTGTGCATTTTGGTAGCATTCT...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCTGAACGCTGGGCTCTaGAGGTCAGGCCTACATCAC +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNLNAGL*RSGLHH
Trigger: GTGATGTAGGCCTGACCTCCAGAGCCCAGCGTTCAG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACACCCCGTCAAGCACTaGCATCAGAGGGAATGCTCT +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPHPVKH*HQRECS
Trigger: AGAGCATTCCCTCTGATGGCAGTGCTTGACGGGGTG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCCTTCTCAAGAGGCTTaGTGGTGTCTCCCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNPSQEA*WCLPQQ
Trigger: CTGCTGAGGGAGACACCAGCAAGCCTCTTGAGAAGG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCCTGGAGGCAGCGGTTaGAATCCTCAATGGTTCCAG +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNPGGSG*NPQWFQ
Trigger: CTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATTGCCCAGGCCAGAGTaGAGTGGTACGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPLPRPE*SGTILA
Trigger: AGCCAAGATCGTACCACTGCACTCTGGCCTGGGCAA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATGATAACATTATTGCTTaGTTGGACTGGGAAGATAAT +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDDNIIA*LDWEDN
Trigger: ATTATCTTCCCAGTCCAAGCAAGCAATAATGTTATC...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAGGACATTTCCAGGTGTaGCCGATGGAAACGGTCACC +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPGHFQV*PMETVT
Trigger: GGTGACCGTTTCCATCGGGCACACCTGGAAATGTCC...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGTATTTGTATGGATTTTaGGGGGAAACCCACTGCTTC +
Preference number: 2 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMYLYGF*GETHCF
Trigger: GAAGCAGTGGGTTTCCCCCCAAAATCCATACAAATA...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACGCATCTTCAGGACTGTaGCCAGTTTCCAGCCCTGCT +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNASSGL*PVSSPA
Trigger: AGCAGGGCTGGAAACTGGCCACAGTCCTGAAGATGC...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATAAGATGAAAATGTTCTaGCAGATTCCATCATCAATC +
Preference number: 2 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDKMKMF*QIPSSI
Trigger: GATTGATGATGGAATCTGCCAGAACATTTTCATCTT...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACGCCCCTCTAGGCACTTaGCAAGTGTACCACCCATCT +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNAPLGT*QVYHPS
Trigger: AGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGC...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACTCCAGGTGTGCCCGATaGAAACGGTCACCAACCAGA +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNSRCAR*KRSPTR
Trigger: TCTGGTTGGTGACCGTTTCCATCGGGCACACCTGGA...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CAA 90 bp TACCTGCTTAGAAATGAATCCCACCAGACCTCCACAAATCAAACTTaGTTAAATCATCCCCTATTGCTGATCAAACTCACTGCTCCAGCA +
Preference number: 2 (lower is better)
Translates to: YLLRNESHQTSTNQT*LNHPLLLIKLTAPA
Trigger: TGCTGGAGCAGTGAGTTTGATCAGCAATAGGGGATGATTTAACAAAGTTTGATTTGTGGAGGTCTGGTGGGATTCATTTCTAAGCAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAACCCAGTTACCTGAATaGTGTCTGAAGGGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPTQLPE*CLKGLE
Trigger: CTCCAGGCCCTTCAGACATCATTCAGGTAACTGGGT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACTGGTCTCAAACTCCTaGCTTCAGGTGATCTGCCCA +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPLVSNS*LQVICP
Trigger: TGGGCAGATCACCTGAAGTCAGGAGTTTGAGACCAG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAGTCCCCACTGTTTGCTaGCTTGCAATCACCCCAAAG +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPVPTVC*LAITPK
Trigger: CTTTGGGGTGATTGCAAGGCAGCAAACAGTGGGGAC...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCTTGTCCCCACTGTTTaGTGCCTTGCAATCACCCCA +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNLVPTV*CLAITP
Trigger: TGGGGTGATTGCAAGGCAGCAAACAGTGGGGACAAG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGATATACATCTGGGTGTaGGTTATATGGTGGAAGGAA +
Preference number: 2 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMIYIWV*VIWWKE
Trigger: TTCCTTCCACCATATAACCCACACCCAGATGTATAT...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACAGGCCAGAGTGCAGTaGTACGATCTTGGCTCACTA +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPQARVQ*YDLGSL
Trigger: TAGTGAGCCAAGATCGTACCACTGCACTCTGGCCTG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAGTGAACTGGTGGCTCTaGGGTAATTCACTGCACTGC +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPVNWWL*GNSLHC
Trigger: GCAGTGCAGTGAATTACCCCAGAGCCACCAGTTCAC...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACGGGCATGTGAACTGGTaGCTCTGGGGTAATTCACTG +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNGHVNW*LWGNSL
Trigger: CAGTGAATTACCCCAGAGCCACCAGTTCACATGCCC...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGCTTATCCCATCAAACTaGACTACTTTTGGAACTTCA +
Preference number: 2 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMLIPSN*TTFGTS
Trigger: TGAAGTTCCAAAAGTAGTTCAGTTTGATGGGATAAG...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAGTGTCAATCAGCACATaGGCTTTCTTCGGTCCTGGA +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPVSIST*AFFGPG
Trigger: TCCAGGACCGAAGAAAGCTCATGTGCTGATTGACAC...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACAACCACTGGCATGTTTaGACGCTCCCCAGTTTGTTC +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNNHWHV*TLPSLF
Trigger: GAACAAACTGGGGAGCGTTCAAACATGCCAGTGGTT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATACACAGGAGCTGTGTaGCTCCCAGTGACTCTAAGT +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPYTGAV*LPVTLS
Trigger: ACTTAGAGTCACTGGGAGTCACACAGCTCCTGTGTA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACGAACCTCCCTTCATGTaGCCACAGAGTTCACTGTCT +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNEPPFM*PQSSLS
Trigger: AGACAGTGAACTCTGTGGTCACATGAAGGGAGGTTC...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCTGCACTGCAGCAACTaGGATGGCAATATGTCCGAT +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNLHCSN*DGNMSD
Trigger: ATCGGACATATTGCCATCTCAGTTGCTGCAGTGCAG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACACGGGTCTGTTGCATaGTACACGCTATGTGGATGT +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPHGSVA*YTLCGC
Trigger: ACATCCACATAGCGTGTATCATGCAACAGACCCGTG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGATGGAAAGTGTAATCTaGATCTATTGCCTAGGCAAT +
Preference number: 2 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMMESVI*IYCLGN
Trigger: ATTGCCTAGGCAATAGATGCAGATTACACTTTCCAT...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACAGTGGGCAGGACCCTaGTGTATGTGTGTAAGAGAT +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPQWAGP*CMCVRD
Trigger: ATCTCTTACACACATACAGCAGGGTCCTGCCCACTG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCAGTGGGCAGGACCCTaGTGTATGTGTGTAAGAGAT +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNQWAGP*CMCVRD
Trigger: ATCTCTTACACACATACAGCAGGGTCCTGCCCACTG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGTGCCATCAGAGGGAATaGTCTAATTTTTATGTTCCT +
Preference number: 2 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMCHQRE*SNFYVP
Trigger: AGGAACATAAAAATTAGAGCATTCCCTCTGATGGCA...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAACGCTCTGTGGTCCTTaGTGTGAGACTGAACAGTTC +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPTLCGP*CETEQF
Trigger: GAACTGTTCAGTCTCACAGCAAGGACCACAGAGCGT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACAGGTCTCTAGAGCTCTaGCTGTTCTGGAAAGCTCAG +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNRSLEL*LFWKAQ
Trigger: CTGAGCTTTCCAGAACAGGCAGAGCTCTAGAGACCT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAAGAGCACGGGTCTGTTaGATGATACACGCTATGTGG +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPRARVC*MIHAMW
Trigger: CCACATAGCGTGTATCATGCAACAGACCCGTGCTCT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACAGCTTTCTTCGGTCCTaGATGGTTGGCTCTGAGCTA +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNSFLRS*MVGSEL
Trigger: TAGCTCAGAGCCAACCATCCAGGACCGAAGAAAGCT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAGTGTGGGTTATATGGTaGAAGGAACCCTTCCCCCAT +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPVWVIW*KEPFPH
Trigger: ATGGGGGAAGGGTTCCTTCCACCATATAACCCACAC...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACTCCAGGAGTTCCCCATaGGTTTTCAACAAGCAGAGA +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNSRSSP*VFNKQR
Trigger: TCTCTGCTTGTTGAAAACTCATGGGGAACTCCTGGA...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACACCCATCTTTCAGCTaGAACATCTACTTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPHPSFS*NIYFSL
Trigger: GAGGCTGAAGTAGATGTTTCAGCTGAAAGATGGGTG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACAGGCCTACATCACTTaGAATTTCAGCACTGTTCCC +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPQAYIT*NFSTVP
Trigger: GGGAACAGTGCTGAAATTGCAAGTGATGTAGGCCTG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACCAGTCTTTCTGGAATaGCAGAGATCCAAAGGGAGA +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPPVFLE*QRSKGR
Trigger: TCTCCCTTTGGATCTCTGGCATTCCAGAAAGACTGG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACAGAGGCAGGAAATCCTaGCTCAGTTTCACAAAGCCA +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNRGRKS*LSFTKP
Trigger: TGGCTTTGTGAAACTGAGGCAGGATTTCCTGCCTCT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAACCCAGGAAATAACATaGCATGGCAAATCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPTQEIT*HGKSQG
Trigger: TCCCTGGGATTTGCCATGCCATGTTATTTCCTGGGT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCTGAACGCCTCTCCTTaGATTAGCTCAGTTATCAGC +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNLNASP*ISSVIS
Trigger: GCTGATAACTGAGCTAATCCAAGGAGAGGCGTTCAG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACTGCAGCAACTGAGATaGCAATATGTCCGATGGACA +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPLQQLR*QYVRWT
Trigger: TGTCCATCGGACATATTGCCATCTCAGTTGCTGCAG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACTTTTATACAACTAACTaGACGCTGGGCTCTGGAGGT +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNFYTTN*TLGSGG
Trigger: ACCTCCAGAGCCCAGCGTTCAGTTAGTTGTATAAAA...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACTTTTACCCTCAGAAATaGACTCCAGGAGTTCCCCAT +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNFYPQK*TPGVPH
Trigger: ATGGGGAACTCCTGGAGTGCATTTCTGAGGGTAAAA...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAGCAAGGAGTAGCATTTaGCAGCATGCCAAAAATGAC +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPARSSI*QHAKND
Trigger: GTCATTTTTGGCATGCTGGCAAATGCTACTCCTTGC...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACGCTCCAGCCTTACAATaGGAAACAGAAAGTCTCACT +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNAPALQ*ETESLT
Trigger: AGTGAGACTTTCTGTTTCCCATTGTAAGGCTGGAGC...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CAA 90 bp CATTCCCATGGGAGAGGAAGGGACTTTATAAATGTTTGGTTCAGGTaGTTTATCAAGACTAATAATTTGGGTCTATCAGCCATAAAATCC +
Preference number: 2 (lower is better)
Translates to: HSHGRGRDFINVWFR*FIKTNNLGLSAIKS
Trigger: GGATTTTATGGCTGATAGACCCAAATTATTAGTCTTGATAAACAACCTGAACCAAACATTTATAAAGTCCCTTCCTCTCCCATGGGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACTGCACATTTCAATTTTaGGACAACAGCATGCCCTGT +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNCTFQF*DNSMPC
Trigger: ACAGGGCATGCTGTTGTCTCAAAATTGAAATGTGCA...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAAAAAACCTGACATCCTaGATGGAGACCCAGGAAATA +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPKNLTS*METQEI
Trigger: TATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACAAAAACCTGACATCCTaGATGGAGACCCAGGAAATA +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNKNLTS*METQEI
Trigger: TATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACGCTTCTCTCCACAAATaGACACCCTTGTCAATGTTT +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNASLHK*TPLSMF
Trigger: AAACATTGACAAGGGTGTGCATTTGTGGAGAGAAGC...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAGCTTCTCTCCACAAATaGACACCCTTGTCAATGTTT +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPASLHK*TPLSMF
Trigger: AAACATTGACAAGGGTGTGCATTTGTGGAGAGAAGC...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAAATTCCCAGTCTTTCTaGAATGCCAGAGATCCAAAG +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPNSQSF*NARDPK
Trigger: CTTTGGATCTCTGGCATTCCAGAAAGACTGGGAATT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATTCTCTTGGGACACATaGAGTATTCTGAGGTTTGCT +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPFSWDT*SILRFA
Trigger: AGCAAACCTCAGAATACTCCATGTGTCCCAAGAGAA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACTCATATGGTCAGTGTTaGCACTGGCATTCTGTTATT +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNSYGQC*HWHSVI
Trigger: AATAACAGAATGCCAGTGTCAACACTGACCATATGA...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAAAAACAGTAAAGAGATaGCCCTCCCTCACTGTATAT +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPKTVKR*PSLTVY
Trigger: ATATACAGTGAGGGAGGGCCATCTCTTTACTGTTTT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACTGGAGGTTGGACAATTaGTTTTGTTCTTGGAATCCA +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNWRLDN*FCSWNP
Trigger: TGGATTCCAAGAACAAAACCAATTGTCCAACCTCCA...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATGGAGGTTGGACAATTaGTTTTGTTCTTGGAATCCA +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPWRLDN*FCSWNP
Trigger: TGGATTCCAAGAACAAAACCAATTGTCCAACCTCCA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACATCATTTTCAGAAATaGATTCCCAGTCTTTCTGGA +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPHHFQK*IPSLSG
Trigger: TCCAGAAAGACTGGGAATTCATTTCTGAAAATGATG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACATTGGGCATTTATTATaGCACGTCAAATTATCGCCA +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNIGHLL*HVKLSP
Trigger: TGGCGATAATTTGACGTGTCATAATAAATGCCCAAT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATTCTTATCTGGAAAATaGTGGTGTCCTAGTTGTCTT +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPFLSGK*WCPSCL
Trigger: AAGACAACTAGGACACCATCATTTTCCAGATAAGAA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACTGCCATCAGAGGGAATaGTCTAATTTTTATGTTCCT +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNCHQRE*SNFYVP
Trigger: AGGAACATAAAAATTAGAGCATTCCCTCTGATGGCA...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAAGAATGCTACCAAAATaGACAAAGGTGGACATTCTA +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPRMLPK*TKVDIL
Trigger: TAGAATGTCCACCTTTGTGCATTTTGGTAGCATTCT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACAGGTGCTATAACCCATaGTTTATGATCTTCAGGAAA +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNRCYNP*FMIFRK
Trigger: TTTCCTGAAGATCATAAACCATGGGTTATAGCACCT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACAGGATTATTATAGTCTaGGAATTTATCCTGGCCAGT +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNRIIIV*EFILAS
Trigger: ACTGGCCAGGATAAATTCCCAGACTATAATAATCCT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACGATAACATTATTGCTTaGTTGGACTGGGAAGATAAT +
Preference number: 2 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNDNIIA*LDWEDN
Trigger: ATTATCTTCCCAGTCCAAGCAAGCAATAATGTTATC...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATGTATATTGACTAGCTaGAAAACAAGGTGCTATAAC +
Preference number: 2 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPCILTS*KTRCYN
Trigger: GTTATAGCACCTTGTTTTCCAGCTAGTCAATATACA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR GCA 72 bp CCACTGGCATGTTTGAACGCTCCCCAGTTTGTTCCCTaGACCCCGTCAAGCACTGCCATCAGAGGGAATGCT +
Preference number: 3 (lower is better)
Translates to: PLACLNAPQFVP*TPSSTAIRGNA
Trigger: AGCATTCCCTCTGATGGCAGTGCTTGACGGGGTGCAGGGAACAAACTGGGGAGCGTTCAAACATGCCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR GCA 72 bp TCTACTGCAGCACATCTGGACCCTGGAGGCAGCGGTTaGAATCCTCAATGGTTCCAGGTCATACGCTGGTCG +
Preference number: 3 (lower is better)
Translates to: STAAHLDPGGSG*NPQWFQVIRWS
Trigger: CGACCAGCGTATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCTGCAGTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 72 bp CAGTTTCCAGCCCTGCTGAGAAACCACTGGCATGTTTaGACGCTCCCCAGTTTGTTCCCTGCACCCCGTCAA +
Preference number: 3 (lower is better)
Translates to: QFPALLRNHWHV*TLPSLFPAPRQ
Trigger: TTGACGGGGTGCAGGGAACAAACTGGGGAGCGTTCAAACATGCCAGTGGTTTCTCAGCAGGGCTGGAAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR GCA 72 bp TCCTGTGGGCCAGAGATACAGGAAGAACTTTTTGGCTaGCACGTCATGGCTAGAGGAGGCGGGGTTGTCATG +
Preference number: 3 (lower is better)
Translates to: SCGPEIQEELFG*HVMARGGGVVM
Trigger: CATGACAACCCCGCCTCCTCTAGCCATGACGTGGCAGCCAAAAAGTTCTTCCTGTATCTCTGGCCCACAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CCA 72 bp ACGCCTCTCCTTGGATTAGCTCAGTTATCAGCCATTTaGAGTCAGGGCACTGCTTCAGGTGACCCCCTGCAG +
Preference number: 3 (lower is better)
Translates to: TPLLGLAQLSAI*SQGTASGDPLQ
Trigger: CTGCAGGGGGTCACCTGAAGCAGTGCCCTGACTCCAAATGGCTGATAACTGAGCTAATCCAAGGAGAGGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTGACTTTCAACATGGTTaGACCCTGGACGGGGCCATG +
Preference number: 3 (lower is better)
Translates to: QQRASSPSRHLASVPPIFDFQHG*TLDGAM
Trigger: CATGGCCCCGTCCAGGGTCAAACCATGTTGAAAGTC...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 72 bp CAAGTCCCTCCATGGGCCAGTTCATCTTTGGGCATGTaGACTGGTGGCTCTGGGGTAATTCACTGCACTGCA +
Preference number: 3 (lower is better)
Translates to: QVPPWASSSLGM*TGGSGVIHCTA
Trigger: TGCAGTGCAGTGAATTACCCCAGAGCCACCAGTTCACATGCCCAAAGATGAACTGGCCCATGGAGGGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATTCAGTTATCAGCCATTaGGAGTCAGGGCACTGCTTC +
Preference number: 3 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHSVISH*ESGHCF
Trigger: GAAGCAGTGCCCTGACTCCAAATGGCTGATAACTGA...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 72 bp GTTATCAGCCATTTGGAGTCAGGGCACTGCTTCAGGTaGCCCCCTGCAGATCCTTCCTACTTTGGGCCTTTA +
Preference number: 3 (lower is better)
Translates to: VISHLESGHCFR*PPADPSYFGPL
Trigger: TAAAGGCCCAAAGTAGGAAGGATCTGCAGGGGGTCACCTGAAGCAGTGCCCTGACTCCAAATGGCTGATAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 72 bp CCGACTCACCTGGATAGCTATGTGTCAATCAGCACATaGGCTTTCTTCGGTCCTGGATGGTTGGCTCTGAGC +
Preference number: 3 (lower is better)
Translates to: PTHLDSYVSIST*AFFGPGWLALS
Trigger: GCTCAGAGCCAACCATCCAGGACCGAAGAAAGCTCATGTGCTGATTGACACATAGCTATCCAGGTGAGTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATAATGCCTGGCTCTCCTaGCTTCCTTATCCCATCAAA +
Preference number: 3 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHNAWLS*LPYPIK
Trigger: TTTGATGGGATAAGGAAGCAAGGAGAGCCAGGCATT...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTAAACCACTGGCATGTTaGAACGCTCCCCAGTTTGTT +
Preference number: 3 (lower is better)
Translates to: QQRASSPSRHLASVPPIFKPLAC*NAPQFV
Trigger: AACAAACTGGGGAGCGTTCAAACATGCCAGTGGTTT...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 72 bp ACACAGAGGAGCAAAGGCGGCTACACAGGAGCTGTGTaGCTCCCAGTGACTCTAAGTTGTCACAAGAAGCAT +
Preference number: 3 (lower is better)
Translates to: TQRSKGGYTGAV*LPVTLSCHKKH
Trigger: ATGCTTCTTGTGACAACTTAGAGTCACTGGGAGTCACACAGCTCCTGTGTAGCCGCCTTTGCTCCTCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 72 bp TACGCTGGTCGTCTAGCATCTGAACCTCCCTTCATGTaGCCACAGAGTTCACTGTCTGGTGCCTTCTCAAGA +
Preference number: 3 (lower is better)
Translates to: YAGRLASEPPFM*PQSSLSGAFSR
Trigger: TCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGAGGTTCAGATGCTAGACGACCAGCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 72 bp CAATGGTTCCAGGTCATACGCTGGTCGTCTAGCATCTaGACCTCCCTTCATGTGACCACAGAGTTCACTGTC +
Preference number: 3 (lower is better)
Translates to: QWFQVIRWSSSI*TSLHVTTEFTV
Trigger: GACAGTGAACTCTGTGGTCACATGAAGGGAGGTTCAGATGCTAGACGACCAGCGTATGACCTGGAACCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 72 bp GAACAGTTCCCTCACAGAGCCTTAATAATAGTTCTCTaGCAGGGCCCCGACATCCCAGTAATGGGAAGACCC +
Preference number: 3 (lower is better)
Translates to: EQFPHRALIIVL*QGPDIPVMGRP
Trigger: GGGTCTTCCCATTACTGGGATGTCGGGGCCCTGTCAGAGAACTATTATTAAGGCTCTGTGAGGGAACTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 72 bp TGGTGGCTCTGGGGTAATTCACTGCACTGCAGCAACTaGGATGGCAATATGTCCGATGGACATTTCCAGGTG +
Preference number: 3 (lower is better)
Translates to: WWLWGNSLHCSN*DGNMSDGHFQV
Trigger: CACCTGGAAATGTCCATCGGACATATTGCCATCTCAGTTGCTGCAGTGCAGTGAATTACCCCAGAGCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR GCA 72 bp CTACCCAACGTCTCACTTTACCAGTGGGCAGGACCCTaGTGTATGTGTGTAAGAGATTTCCTCCCCGTTTCA +
Preference number: 3 (lower is better)
Translates to: LPNVSLYQWAGP*CMCVRDFLPVS
Trigger: TGAAACGGGGAGGAAATCTCTTACACACATACAGCAGGGTCCTGCCCACTGGTAAAGTGAGACGTTGGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CCA 72 bp CAGTTACACCCCCTACCCAACGTCTCACTTTACCAGTaGGCAGGACCCTGCTGTATGTGTGTAAGAGATTTC +
Preference number: 3 (lower is better)
Translates to: QLHPLPNVSLYQ*AGPCCMCVRDF
Trigger: GAAATCTCTTACACACATACAGCAGGGTCCTGCCCACTGGTAAAGTGAGACGTTGGGTAGGGGGTGTAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATATAAATACAGCTATGTaGGGGCCTTTTTACCCTCAG +
Preference number: 3 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHINTAM*GPFYPQ
Trigger: CTGAGGGTAAAAAGGCCCCAACATAGCTGTATTTAT...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATCACAAATGCACACCCTaGTCAATGTTTTATCTCTGC +
Preference number: 3 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHHKCTP*SMFYLC
Trigger: GCAGAGATAAAACATTGACAAGGGTGTGCATTTGTG...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTTACAGGAAGAACTTTTaGGCTGCCACGTCATGGCTA +
Preference number: 3 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAYRKNF*AATSWL
Trigger: TAGCCATGACGTGGCAGCCAAAAAGTTCTTCCTGTA...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTCAAAGGGAGAGACGATaGAAAAGCCTCATAGAAGGA +
Preference number: 3 (lower is better)
Translates to: QQRASSPSRHLASVPPIFQRERR*KSLIEG
Trigger: TCCTTCTATGAGGCTTTTCAATCGTCTCTCCCTTTG...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR GCA 72 bp CCATTTGGAGTCAGGGCACTGCTTCAGGTGACCCCCTaGAGATCCTTCCTACTTTGGGCCTTTAAAATCATA +
Preference number: 3 (lower is better)
Translates to: PFGVRALLQVTP*RSFLLWAFKII
Trigger: TATGATTTTAAAGGCCCAAAGTAGGAAGGATCTGCAGGGGGTCACCTGAAGCAGTGCCCTGACTCCAAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CCA 72 bp CTATGTGTCAATCAGCACATGAGCTTTCTTCGGTCCTaGATGGTTGGCTCTGAGCTACCTCTGCACCAAACT +
Preference number: 3 (lower is better)
Translates to: LCVNQHMSFLRS*MVGSELPLHQT
Trigger: AGTTTGGTGCAGAGGTAGCTCAGAGCCAACCATCCAGGACCGAAGAAAGCTCATGTGCTGATTGACACATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATAGTTTGGATAGTAAATaGTGTTGGCCACAAAGCACT +
Preference number: 3 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHSLDSK*CWPQST
Trigger: AGTGCTTTGTGGCCAACACAATTTACTATCCAAACT...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTCAGGCCTACATCACTaGCAATTTCAGCACTGTTCC +
Preference number: 3 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDSGLHH*QFQHCS
Trigger: GGAACAGTGCTGAAATTGCAAGTGATGTAGGCCTGA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 72 bp GCACATGAGCTTTCTTCGGTCCTGGATGGTTGGCTCTaGGCTACCTCTGCACCAAACTCTTTGAAAAGCTTT +
Preference number: 3 (lower is better)
Translates to: AHELSSVLDGWL*ATSAPNSLKSF
Trigger: AAAGCTTTTCAAAGAGTTTGGTGCAGAGGTAGCTCAGAGCCAACCATCCAGGACCGAAGAAAGCTCATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATCAAAGGGAGAGACGATaGAAAAGCCTCATAGAAGGA +
Preference number: 3 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDQRERR*KSLIEG
Trigger: TCCTTCTATGAGGCTTTTCAATCGTCTCTCCCTTTG...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATCCTAATAGTTGTATATaGACTAGCTGGAAAACAAGG +
Preference number: 3 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHPNSCI*TSWKTR
Trigger: CCTTGTTTTCCAGCTAGTCAATATACAACTATTAGG...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATGTCTCACTTGCTTTTTaGGCCACAGGAAGTACAGAA +
Preference number: 3 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDVSLAF*ATGSTE
Trigger: TTCTGTACTTCCTGTGGCCAAAAAAGCAAGTGAGAC...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTTTGGCCACAAAGCACTaGTATAAATACAGCTATGTT +
Preference number: 3 (lower is better)
Translates to: QQRASSPSRHLASVPPIFLATKH*YKYSYV
Trigger: AACATAGCTGTATTTATACAAGTGCTTTGTGGCCAA...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGTCAGTTATCAGCCATTaGGAGTCAGGGCACTGCTTC +
Preference number: 3 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMSVISH*ESGHCF
Trigger: GAAGCAGTGCCCTGACTCCAAATGGCTGATAACTGA...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATCAAACTGAACTACTTTaGGAACTTCATCAGCTTCGG +
Preference number: 3 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDQTELL*ELHQLR
Trigger: CCGAAGCTGATGAAGTTCCAAAAGTAGTTCAGTTTG...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATCAGGGTAACCTTCTATaGTCTTTTCTTCTTGCCTTC +
Preference number: 3 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDQGNLL*SFLLAF
Trigger: GAAGGCAAGAAGAAAAGACAATAGAAGGTTACCCTG...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATATGGAGGTTGGACAATaGGTTTTGTTCTTGGAATCC +
Preference number: 3 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDMEVGQ*VLFLES
Trigger: GGATTCCAAGAACAAAACCAATTGTCCAACCTCCAT...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTCCTAATAGTTGTATATaGACTAGCTGGAAAACAAGG +
Preference number: 3 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAPNSCI*TSWKTR
Trigger: CCTTGTTTTCCAGCTAGTCAATATACAACTATTAGG...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATAAGTTGATAACATTATaGCTTGCTTGGACTGGGAAG +
Preference number: 3 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDKLITL*LAWTGK
Trigger: CTTCCCAGTCCAAGCAAGCAATAATGTTATCAACTT...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 72 bp ATGCCTGGCTCTCCTTGCTTCCTTATCCCATCAAACTaGACTACTTTTGGAACTTCATCAGCTTCGGTTCCT +
Preference number: 3 (lower is better)
Translates to: MPGSPCFLIPSN*TTFGTSSASVP
Trigger: AGGAACCGAAGCTGATGAAGTTCCAAAAGTAGTTCAGTTTGATGGGATAAGGAAGCAAGGAGAGCCAGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 72 bp CTCCCCGTTTCAGCGGAGGTTCATCATTTTCAGAAATaGATTCCCAGTCTTTCTGGAATGCCAGAGATCCAA +
Preference number: 3 (lower is better)
Translates to: LPVSAEVHHFQK*IPSLSGMPEIQ
Trigger: TTGGATCTCTGGCATTCCAGAAAGACTGGGAATTCATTTCTGAAAATGATGAACCTCCGCTGAAACGGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CCA 72 bp ACGATTGAAAAGCCTCATAGAAGGAGCCGACTCACCTaGATAGCTATGTGTCAATCAGCACATGAGCTTTCT +
Preference number: 3 (lower is better)
Translates to: TIEKPHRRSRLT*IAMCQSAHELS
Trigger: AGAAAGCTCATGTGCTGATTGACACATAGCTATCCAGGTGAGTCGGCTCCTTCTATGAGGCTTTTCAATCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTTGGCCACAAAGCACTaGTATAAATACAGCTATGTT +
Preference number: 3 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDLATKH*YKYSYV
Trigger: AACATAGCTGTATTTATACAAGTGCTTTGTGGCCAA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATTCGGTCCTGGATGGTaGGCTCTGAGCTACCTCTGC +
Preference number: 3 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPFGPGW*ALSYLC
Trigger: GCAGAGGTAGCTCAGAGCCAACCATCCAGGACCGAA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGCCCAGTGACTCTAAGTaGTCACAAGAAGCATCTTCA +
Preference number: 3 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMPSDSK*SQEASS
Trigger: TGAAGATGCTTCTTGTGACAACTTAGAGTCACTGGG...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCCCTGGAGGCAGCGGTaGCAATCCTCAATGGTTCCA +
Preference number: 3 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNPWRQR*QSSMVP
Trigger: TGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAAGCCCCTCTAGGCACTaGGCAAGTGTACCACCCATC +
Preference number: 3 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPSPSRH*ASVPPI
Trigger: GATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAGACTTTCAACATGGTTaGACCCTGGACGGGGCCATG +
Preference number: 3 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPDFQHG*TLDGAM
Trigger: CATGGCCCCGTCCAGGGTCAAACCATGTTGAAAGTC...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 72 bp AGGTTGGACAATTGGTTTTGTTCTTGGAATCCACACTaGATGCCCTTGCTAGAAGTCCAAAATAAGGGTCAC +
Preference number: 3 (lower is better)
Translates to: RLDNWFCSWNPH*MPLLEVQNKGH
Trigger: GTGACCCTTATTTTGGACTTCTAGCAAGGGCATTCAGTGTGGATTCCAAGAACAAAACCAATTGTCCAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGTTAAATCATCCCCTATaGCTGATCAAACTCACTGCT +
Preference number: 3 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMLNHPL*LIKLTA
Trigger: AGCAGTGAGTTTGATCAGCAATAGGGGATGATTTAA...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCTCTGCAAGCTCCTTTaGCAGCTAATGCCTGGCTCT +
Preference number: 3 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNLCKLL*QLMPGS
Trigger: AGAGCCAGGCATTAGCTGCAAAAGGAGCTTGCAGAG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACAAAGGGCTGGACCAGTaGAGTTCTGTGTCAGTGCTC +
Preference number: 3 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNKGLDQ*SSVSVL
Trigger: GAGCACTGACACAGAACTCAACTGGTCCAGCCCTTT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACTGGGCTGTGTAGGTTaGGCCACTCACTATGTTCTG +
Preference number: 3 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPLGCVG*ATHYVL
Trigger: CAGAACATAGTGAGTGGCCAAACCTACACAGCCCAG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CCA 72 bp TGGGGCACAGCACCTAATAGTTGTATATTGACTAGCTaGAAAACAAGGTGCTATAACCCATGGTTTATGATC +
Preference number: 3 (lower is better)
Translates to: WGTAPNSCILTS*KTRCYNPWFMI
Trigger: GATCATAAACCATGGGTTATAGCACCTTGTTTTCCAGCTAGTCAATATACAACTATTAGGTGCTGTGCCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAAATGCCTGGCTCTCCTaGCTTCCTTATCCCATCAAA +
Preference number: 3 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPNAWLS*LPYPIK
Trigger: TTTGATGGGATAAGGAAGCAAGGAGAGCCAGGCATT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAAAACCACTGGCATGTTaGAACGCTCCCCAGTTTGTT +
Preference number: 3 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPKPLAC*NAPQFV
Trigger: AACAAACTGGGGAGCGTTCAAACATGCCAGTGGTTT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR TCA 72 bp ATCTTTTCTAATTCCACATGGCCATTTGTCACGAGATaGCTAACAATGTCTGTGGGGTCAGGTTTAATACAT +
Preference number: 3 (lower is better)
Translates to: IFSNSTWPFVTR*LTMSVGSGLIH
Trigger: ATGTATTAAACCTGACCCCACAGACATTGTTAGTCATCTCGTGACAAATGGCCATGTGGAATTAGAAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACACAAATGCACACCCTaGTCAATGTTTTATCTCTGC +
Preference number: 3 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPHKCTP*SMFYLC
Trigger: GCAGAGATAAAACATTGACAAGGGTGTGCATTTGTG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACAAACTGAACTACTTTaGGAACTTCATCAGCTTCGG +
Preference number: 3 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPQTELL*ELHQLR
Trigger: CCGAAGCTGATGAAGTTCCAAAAGTAGTTCAGTTTG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATCTGCACCAAACTCTTaGAAAAGCTTTTGGCTGACT +
Preference number: 3 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPSAPNS*KSFWLT
Trigger: AGTCAGCCAAAAGCTTTTCAAAGAGTTTGGTGCAGA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACAATTGGTTTTGTTCTaGGAATCCACACTGAATGCC +
Preference number: 3 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPQLVLF*ESTLNA
Trigger: GGCATTCAGTGTGGATTCCAAGAACAAAACCAATTG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATTAAATCATCCCCTATaGCTGATCAAACTCACTGCT +
Preference number: 3 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPLNHPL*LIKLTA
Trigger: AGCAGTGAGTTTGATCAGCAATAGGGGATGATTTAA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATGTAATCTGCATCTATaGCCTAGGCAATTTCCTTTC +
Preference number: 3 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPCNLHL*PRQFPF
Trigger: GAAAGGAAATTGCCTAGGCAATAGATGCAGATTACA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACGGTGTCCTAGTTGTCTaGAGTCATAGAATAGTCTAT +
Preference number: 3 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNGVLVV*SHRIVY
Trigger: ATAGACTATTCTATGACTCAAGACAACTAGGACACC...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAATCATATGGTCAGTGTaGACACTGGCATTCTGTTAT +
Preference number: 3 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPIIWSV*TLAFCY
Trigger: ATAACAGAATGCCAGTGTCAACACTGACCATATGAT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR-3UTR CAA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACGGAGAAAGACTAGGTTaGGTATTGGGCATTTATTAT +
Preference number: 3 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNGERLG*VLGIYY
Trigger: ATAATAAATGCCCAATACCAAACCTAGTCTTTCTCC...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATGATGGCCCATGCAGGTaGGGGTGGCCGACGTCTGAG +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHDGPCR*GWPTSE
Trigger: CTCAGACGTCGGCCACCCTCACCTGCATGGGCCATC...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR TCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATGGGCACTGCTTCAGGTaGCCCCCTGCAGATCCTTCC +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHGHCFR*PPADPS
Trigger: GGAAGGATCTGCAGGGGGTCACCTGAAGCAGTGCCC...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTCAGCCGACAGCTGGCTaGCACTTCCCTGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFQPTAG*HFPGLR
Trigger: CCTGAGGCCAGGGAAGTGGCAGCCAGCTGTCGGCTG...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATAGAAGAGCTCCATCGTaGTGCCCCCGAGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHRRAPS*CPRAGL
Trigger: CAGCCCTGCTCGGGGGCACCACGATGGAGCTCTTCT...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR TCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATTCCTGGCTCGGTAGATaGAGAATGGCTCCACCCGGG +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHSWLGR*RMAPPG
Trigger: CCCGGGTGGAGCCATTCTTCATCTACCGAGCCAGGA...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR TCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTTCCGGTCCACCTGCCTaGGAAGAGTCTGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFSGPPA*EESEAG
Trigger: CCCAGCCTCAGACTCTTCTCAGGCAGGTGGACCGGA...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATCTGTCACTCCCCCGGTaGAGACAGCAGTGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHLSLPR*RQQWCP
Trigger: TGGACACCACTGCTGTCTGCACCGGGGGAGTGACAG...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR GCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATCGGGCTGGAAACGCTTaGTGGGGGCTCTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDRAGNA*WGLSRP
Trigger: GGGCCTGGAGAGCCCCCAGCAAGCGTTTCCAGCCCG...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATAGAGGACCTGCACCGTaGTTATTCCCGGCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHRGPAP*LFPAPD
Trigger: GTCGGGAGCCGGGAATAACCACGGTGCAGGTCCTCT...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATGCTCAGCTCGGTGTCTaGGATCTCAATCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHAQLGV*DLNLQG
Trigger: CCCCTGCAGATTGAGATCTCAGACACCGAGCTGAGC...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATCTGCCGTCCTGTAACTaGGCGATTTTCGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHLPSCN*AIFGSS
Trigger: GGAGGAGCCGAAAATCGCTCAGTTACAGGACGGCAG...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTGACCAGCCAGGGTCCTaGCGTCCTGTAACTGAGCGA +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFDQPGS*RPVTER
Trigger: TCGCTCAGTTACAGGACGGCAGGACCCTGGCTGGTC...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTTCCTCCAGAGGACACTaGCCAGCCTTGTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFSSRGH*PALSAG
Trigger: CCCAGCTGACAAGGCTGGCCAGTGTCCTCTGGAGGA...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATGAGAGACCAAAAAGGTaGCCGTGTCCCCTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHERPKR*PCPLPG
Trigger: TCCGGGAAGGGGACACGGCCACCTTTTTGGTCTCTC...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299308.7
3UTR CAA 72 bp CCAGTTTCCAGCCCTGCTGAGAAACCACTGGCATGTTaGAACGCTCCCCAGTTTGTTCCCTGCACCCCGTCA +
Preference number: 4 (lower is better)
Translates to: PVSSPAEKPLAC*NAPQFVPCTPS
Trigger: TGACGGGGTGCAGGGAACAAACTGGGGAGCGTTCAAACATGCCAGTGGTTTCTCAGCAGGGCTGGAAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTGCTCAGCTCGGTGTCTaGGATCTCAATCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFAQLGV*DLNLQG
Trigger: CCCCTGCAGATTGAGATCTCAGACACCGAGCTGAGC...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATCACCCCGTCAAGCACTaGCATCAGAGGGAATGCTCT +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHHPVKH*HQRECS
Trigger: AGAGCATTCCCTCTGATGGCAGTGCTTGACGGGGTG...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATCCTTCTCAAGAGGCTTaGTGGTGTCTCCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHPSQEA*WCLPQQ
Trigger: CTGCTGAGGGAGACACCAGCAAGCCTCTTGAGAAGG...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTTGCTCTGCCCTCTACTaGAGCACATCTGGACCCTGG +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFCSALY*STSGPW
Trigger: CCAGGGTCCAGATGTGCTGCAGTAGAGGGCAGAGCA...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATTTGCCCAGGCCAGAGTaGAGTGGTACGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHLPRPE*SGTILA
Trigger: AGCCAAGATCGTACCACTGCACTCTGGCCTGGGCAA...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATGTGCCTGGGCCAGTGTaGTTATCAGTGCCAGATGTG +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHVPGPV*LSVPDV
Trigger: CACATCTGGCACTGATAAGCACACTGGCCCAGGCAC...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATGCCAGCCTTGTCAGCTaGGTAGAGCGTGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHASLVS*VEREEE
Trigger: CTCTTCTTCACGCTCTACCCAGCTGACAAGGCTGGC...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATCCCACGAAGGTTGTCTaGCTGACGAAGATCTCGGAG +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHPTKVV*LTKISE
Trigger: CTCCGAGATCTTCGTCAGCCAGACAACCTTCGTGGG...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTAGAGGACCTGCACCGTaGTTATTCCCGGCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLARGPAP*LFPAPD
Trigger: GTCGGGAGCCGGGAATAACCACGGTGCAGGTCCTCT...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CAA 72 bp TACAGTCCTGTGGGCCAGAGATACAGGAAGAACTTTTaGGCTGCCACGTCATGGCTAGAGGAGGCGGGGTTG +
Preference number: 4 (lower is better)
Translates to: YSPVGQRYRKNF*AATSWLEEAGL
Trigger: CAACCCCGCCTCCTCTAGCCATGACGTGGCAGCCAAAAAGTTCTTCCTGTATCTCTGGCCCACAGGACTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CAA 72 bp CACCCCAAAGCACACTACTGGCTGGGCTGTGTAGGTTaGGCCACTCACTATGTTCTGCAGCTGAGATCCGGT +
Preference number: 4 (lower is better)
Translates to: HPKAHYWLGCVG*ATHYVLQLRSG
Trigger: ACCGGATCTCAGCTGCAGAACATAGTGAGTGGCCAAACCTACACAGCCCAGCCAGTAGTGTGCTTTGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTGCTCCTCCACCTTCATaGACTCGGTCACAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFAPPPS*TRSQGQ
Trigger: CTGACCTTGTGACCGAGTTCATGAAGGTGGAGGAGC...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTCCCTCAGCAGGAGTCTaGGCATTCCATTCCCATGGG +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAPSAGV*AFHSHG
Trigger: CCCATGGGAATGGAATGCTCAGACTCCTGCTGAGGG...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATACTCCTGACTTCAGGTaGTCTGCCCACCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDTPDFR*SAHLGL
Trigger: GAGGCCCAGGTGGGCAGATCACCTGAAGTCAGGAGT...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTTCAGTGATGTCAAACTaGCAGTCGGGGCCCAGCATG +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFSVMSN*QSGPSM
Trigger: CATGCTGGGCCCCGACTGGCAGTTTGACATCACTGA...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATGACCAGCCAGGGTCCTaGCGTCCTGTAACTGAGCGA +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDDQPGS*RPVTER
Trigger: TCGCTCAGTTACAGGACGGCAGGACCCTGGCTGGTC...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATCAGATCATCTTGGGTTaGGTAGACCACCACACTCCC +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHQIILG*VDHHTP
Trigger: GGGAGTGTGGTGGTCTACCCAACCCAAGATGATCTG...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTCAACTAACTGAACGCTaGGCTCTGGAGGTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFQLTER*ALEVRP
Trigger: AGGCCTGACCTCCAGAGCCCAGCGTTCAGTTAGTTG...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATTTCTTCGGTCCTGGATaGTTGGCTCTGAGCTACCTC +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHFFGPG*LALSYL
Trigger: GAGGTAGCTCAGAGCCAACCATCCAGGACCGAAGAA...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTGCATCTTCAGGACTGTaGCCAGTTTCCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFASSGL*PVSSPA
Trigger: AGCAGGGCTGGAAACTGGCCACAGTCCTGAAGATGC...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTGAAAGCTCAGCACCCTaGGCCCAGTACAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAESSAP*AQYKAP
Trigger: AGGGGCTTTGTACTGGGCCCAGGGTGCTGAGCTTTC...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATAGAAGGCTGAGTGCCTaGGCCAGTGTGCTTATCAGT +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHRRLSA*ASVLIS
Trigger: ACTGATAAGCACACTGGCCCAGGCACTCAGCCTTCT...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATGGGCCAGTTCATCTTTaGGCATGTGAACTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHGPVHL*ACELVA
Trigger: AGCCACCAGTTCACATGCCCAAAGATGAACTGGCCC...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATGACTGGAGTTCCTTGTaGGGTCTTGGTTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHDWSSL*GLGWLL
Trigger: AAGAAGCCAACCAAGACCTCACAAGGAACTCCAGTC...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR TCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAATTCCAGGTCCAGGCCTaGGCTGAACCACTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKFQVQA*AEPLGQ
Trigger: CTGCCCGAGTGGTTCAGCTCAGGCCTGGACCTGGAA...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR TCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATCCCTCAGCAGGAGTCTaGGCATTCCATTCCCATGGG +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDPSAGV*AFHSHG
Trigger: CCCATGGGAATGGAATGCTCAGACTCCTGCTGAGGG...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATCAGTGGGCAGGACCCTaGTGTATGTGTGTAAGAGAT +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHQWAGP*CMCVRD
Trigger: ATCTCTTACACACATACAGCAGGGTCCTGCCCACTG...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATGAGTTCACTGTCTGGTaGCTTCTCAAGAGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHEFTVW*LLKRLA
Trigger: AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTC...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATTTGATTCCTGTGCTCTaGCCTCTACTGCAGCACATC +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHLIPVL*PLLQHI
Trigger: GATGTGCTGCAGTAGAGGGCAGAGCACAGGAATCAA...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTCTTGTCCCCACTGTTTaGTGCCTTGCAATCACCCCA +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFLVPTV*CLAITP
Trigger: TGGGGTGATTGCAAGGCAGCAAACAGTGGGGACAAG...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTCGGTAGATGAAGAATaGCTCCACCCGGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDSVDEE*LHPGLQ
Trigger: CTGCAGGCCCGGGTGGAGCCATTCTTCATCTACCGA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGTGCGTGTCCGGGCGATaGCCCATGCAGGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMCVSGR*PMQVRV
Trigger: CACCCTCACCTGCATGGGCCATCGCCCGGACACGCA...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATAGCTTTCTTCGGTCCTaGATGGTTGGCTCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHSFLRS*MVGSEL
Trigger: TAGCTCAGAGCCAACCATCCAGGACCGAAGAAAGCT...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTGTCTCACTTTACCAGTaGGCAGGACCCTGCTGTATG +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFVSLYQ*AGPCCM
Trigger: CATACAGCAGGGTCCTGCCCACTGGTAAAGTGAGAC...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATGAAAGCTCAGCACCCTaGGCCCAGTACAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDESSAP*AQYKAP
Trigger: AGGGGCTTTGTACTGGGCCCAGGGTGCTGAGCTTTC...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTGGGCATGTGAACTGGTaGCTCTGGGGTAATTCACTG +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFGHVNW*LWGNSL
Trigger: CAGTGAATTACCCCAGAGCCACCAGTTCACATGCCC...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATCGGTCACAAGGTCAGTaGTGTCAAACTGCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDRSQGQ*CQTASR
Trigger: CCGACTGGCAGTTTGACATCACTGACCTTGTGACCG...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATTCCAGGAGTTCCCCATaGGTTTTCAACAAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHSRSSP*VFNKQR
Trigger: TCTCTGCTTGTTGAAAACTCATGGGGAACTCCTGGA...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATCACCCATCTTTCAGCTaGAACATCTACTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHHPSFS*NIYFSL
Trigger: GAGGCTGAAGTAGATGTTTCAGCTGAAAGATGGGTG...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTCACCGAGGAAGGCTTaGTGTGAAAGCATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDSPRKA*CESMAS
Trigger: GGAGGCCATGCTTTCACATCAAGCCTTCCTCGGTGA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613307.1
CDS-3UTR GCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAACCTGCCAGGTAATCTaGTGGGCCCCAGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKTCQVI*WAPARS
Trigger: TGACCTGGCTGGGGCCCAGCAGATTACCTGGCAGGT...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR GCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTCAGTGATGTCAAACTaGCAGTCGGGGCCCAGCATG +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDSVMSN*QSGPSM
Trigger: CATGCTGGGCCCCGACTGGCAGTTTGACATCACTGA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATAGAGGCAGGAAATCCTaGCTCAGTTTCACAAAGCCA +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHRGRKS*LSFTKP
Trigger: TGGCTTTGTGAAACTGAGGCAGGATTTCCTGCCTCT...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTGGCTGCCACTTCCCTaGCCTCAGGGAAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDWLPLP*PQGKQT
Trigger: TGTTTGCTTTCCCTGAGGCCAGGGAAGTGGCAGCCA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGCTTGCAGCCGACAGCTaGCTGCCACTTCCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMLAADS*LPLPWP
Trigger: AGGCCAGGGAAGTGGCAGCCAGCTGTCGGCTGCAAG...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTGAGGTGAAGTGCTGGTaGGTGAAGTTCACAATCGTG +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFEVKCW*VKFTIV
Trigger: CACGATTGTGAACTTCACCCACCAGCACTTCACCTC...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATAGGAGCCGACTCACCTaGATAGCTATGTGTCAATCA +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHRSRLT*IAMCQS
Trigger: TGATTGACACATAGCTATCCAGGTGAGTCGGCTCCT...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTGTCTCACTTTACCAGTaGGCAGGACCCTGCTGTATG +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAVSLYQ*AGPCCM
Trigger: CATACAGCAGGGTCCTGCCCACTGGTAAAGTGAGAC...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTGCAGTGGTACGATCTTaGCTCACTACAACCTTCACC +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFAVVRS*LTTTFT
Trigger: GGTGAAGGTTGTAGTGAGCCAAGATCGTACCACTGC...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTCCAGGTGTGCCCGATaGAAACGGTCACCAACCAGA +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDSRCAR*KRSPTR
Trigger: TCTGGTTGGTGACCGTTTCCATCGGGCACACCTGGA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTAATCAAGTCCCTCCATaGGCCAGTTCATCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFNQVPP*ASSSLG
Trigger: GCCCAAAGATGAACTGGCCCATGGAGGGACTTGATT...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAACAGCTGGGTAGAGCGTaGAGAAGAGCTCCATCGTGG +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKQLGRA*RRAPSW
Trigger: CCACGATGGAGCTCTTCTTCACGCTCTACCCAGCTG...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR TCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTATTGGTCCTCACTGCTaGCTCTCACTGCCGTTATCT +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAIGPHC*LSLPLS
Trigger: AGATAACGGCAGTGAGAGTCAGCAGTGAGGACCAAT...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR TCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTAACCACTGGCATGTTTaGACGCTCCCCAGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLANHWHV*TLPSLF
Trigger: GAACAAACTGGGGAGCGTTCAAACATGCCAGTGGTT...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTACAAGACCAAGCCATTaGCGAGCAAAGACCAAAGGG +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLATRPSH*RAKTKG
Trigger: CCCTTTGGTCTTTGCTCGTCAATGGCTTGGTCTTGT...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATACCCAGTTACCTGAATaGTGTCTGAAGGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDTQLPE*CLKGLE
Trigger: CTCCAGGCCCTTCAGACATCATTCAGGTAACTGGGT...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTCTGCACTGCAGCAACTaGGATGGCAATATGTCCGAT +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLALHCSN*DGNMSD
Trigger: ATCGGACATATTGCCATCTCAGTTGCTGCAGTGCAG...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTACTGCTGACTCTCACTaGCGTTATCTTCACACCTGC +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLATADSH*RYLHTC
Trigger: GCAGGTGTGAAGATAACGGCAGTGAGAGTCAGCAGT...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR GCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTTTGATTCCTGTGCTCTaGCCTCTACTGCAGCACATC +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLALIPVL*PLLQHI
Trigger: GATGTGCTGCAGTAGAGGGCAGAGCACAGGAATCAA...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTACGCTCTGTGGTCCTTaGTGTGAGACTGAACAGTTC +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLATLCGP*CETEQF
Trigger: GAACTGTTCAGTCTCACAGCAAGGACCACAGAGCGT...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTCACTGTTTGCTGCCTTaGAATCACCCCAAAGCACAC +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAHCLLP*NHPKAH
Trigger: GTGTGCTTTGGGGTGATTGCAAGGCAGCAAACAGTG...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATGGCCTCCACGCAGTCTaGAGGATCTACACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDGLHAV*RIYTFL
Trigger: AAGAAAGGTGTAGATCCTGCAGACTGCGTGGAGGCC...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613307.1
CDS-3UTR CCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTACAAGGTCTGCACTTTaGGTCTGTTGGAGTAGATGG +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFTRSAL*VCWSRW
Trigger: CCATCTACTCCAACAGACCCAAAGTGCAGACCTTGT...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGTGCCAGGTAATCTGCTaGGCCCCAGCCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMCQVIC*APARSL
Trigger: CAGTGACCTGGCTGGGGCCCAGCAGATTACCTGGCA...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTTGGGAGGTGAAGTGCTaGTGGGTGAAGTTCACAATC +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAWEVKC*WVKFTI
Trigger: GATTGTGAACTTCACCCACCAGCACTTCACCTCCCA...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAGACTCGGCCACAAACTaGGTGAGGACACGCACTGTG +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKDSATN*VRTRTV
Trigger: CACAGTGCGTGTCCTCACCCAGTTTGTGGCCGAGTC...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTTGGCAATATGTCCGATaGACATTTCCAGGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAWQYVR*TFPGVP
Trigger: GGGCACACCTGGAAATGTCCATCGGACATATTGCCA...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATGTGAACTGGTGGCTCTaGGGTAATTCACTGCACTGC +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDVNWWL*GNSLHC
Trigger: GCAGTGCAGTGAATTACCCCAGAGCCACCAGTTCAC...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATGGGCATGTGAACTGGTaGCTCTGGGGTAATTCACTG +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDGHVNW*LWGNSL
Trigger: CAGTGAATTACCCCAGAGCCACCAGTTCACATGCCC...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGCTGCCGTCCTGTAACTaGGCGATTTTCGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMLPSCN*AIFGSS
Trigger: GGAGGAGCCGAAAATCGCTCAGTTACAGGACGGCAG...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTTTAATACATTTGCACTaGGCTCGTACCAGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLALIHLH*ARTRQS
Trigger: GGACTGCCTGGTACGAGCTCAGTGCAAATGTATTAA...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATGAACCTCCCTTCATGTaGCCACAGAGTTCACTGTCT +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDEPPFM*PQSSLS
Trigger: AGACAGTGAACTCTGTGGTCACATGAAGGGAGGTTC...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATACAAGACCAAGCCATTaGCGAGCAAAGACCAAAGGG +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDTRPSH*RAKTKG
Trigger: CCCTTTGGTCTTTGCTCGTCAATGGCTTGGTCTTGT...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTTCTTGGAATCCACACTaGATGCCCTTGCTAGAAGTC +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLASWNPH*MPLLEV
Trigger: GACTTCTAGCAAGGGCATTCAGTGTGGATTCCAAGA...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATGAAAAAGGACTCCTCTaGATTGGAGATGTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHEKGLL*IGDVQV
Trigger: AACTTGCACATCTCCAATGCAGAGGAGTCCTTTTTC...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR GCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTATTGTTCTCCCACTTaGCTTCCTCCTCCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDYCSPT*LPPPED
Trigger: GTCCTCTGGAGGAGGAAGGCAAGTGGGAGAACAATA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR GCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATTATCTTCACACCTGCTaGCGCCTTAATTCTAAGAGT +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHYLHTC*RLNSKS
Trigger: ACTCTTAGAATTAAGGCGGCAGCAGGTGTGAAGATA...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR GCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTCGTTATCTTCACACCTaGTGCCGCCTTAATTCTAAG +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFRYLHT*CRLNSK
Trigger: CTTAGAATTAAGGCGGCAGCAGGTGTGAAGATAACG...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR GCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGATCGGGTACTCCACCTaGCAGGTAATCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMIGYST*QVICWA
Trigger: GGCCCAGCAGATTACCTGGCAGGTGGAGTACCCGAT...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR GCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTTGCCCTCAATATCATTaGTGCCTCCTTGGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLACPQYH*CLLGAH
Trigger: ATGAGCACCAAGGAGGCAGCAATGATATTGAGGGCA...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATCAGTGGGCAGGACCCTaGTGTATGTGTGTAAGAGAT +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDQWAGP*CMCVRD
Trigger: ATCTCTTACACACATACAGCAGGGTCCTGCCCACTG...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAACACCCCGTCAAGCACTaGCATCAGAGGGAATGCTCT +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKHPVKH*HQRECS
Trigger: AGAGCATTCCCTCTGATGGCAGTGCTTGACGGGGTG...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAGTGCCTGGGCCAGTGTaGTTATCAGTGCCAGATGTG +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKVPGPV*LSVPDV
Trigger: CACATCTGGCACTGATAAGCACACTGGCCCAGGCAC...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAGGACATTTCCAGGTGTaGCCGATGGAAACGGTCACC +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKGHFQV*PMETVT
Trigger: GGTGACCGTTTCCATCGGGCACACCTGGAAATGTCC...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATGTCTGTTGGAGTAGATaGAGCTGTCAAGGATGTGGG +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDVCWSR*SCQGCG
Trigger: CCCACATCCTTGACAGCTCCATCTACTCCAACAGAC...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAAAACCTCGGTGTCCATaGCAAGAGGGACGATGCCCA +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKKPRCP*QEGRCP
Trigger: TGGGCATCGTCCCTCTTGCCATGGACACCGAGGTTT...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATGAGGTGAAGTGCTGGTaGGTGAAGTTCACAATCGTG +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDEVKCW*VKFTIV
Trigger: CACGATTGTGAACTTCACCCACCAGCACTTCACCTC...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGGACTCGGCCACAAACTaGGTGAGGACACGCACTGTG +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMDSATN*VRTRTV
Trigger: CACAGTGCGTGTCCTCACCCAGTTTGTGGCCGAGTC...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTCTGAACGCCTCTCCTTaGATTAGCTCAGTTATCAGC +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLALNASP*ISSVIS
Trigger: GCTGATAACTGAGCTAATCCAAGGAGAGGCGTTCAG...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGCTGAACGCTGGGCTCTaGAGGTCAGGCCTACATCAC +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMLNAGL*RSGLHH
Trigger: GTGATGTAGGCCTGACCTCCAGAGCCCAGCGTTCAG...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATAATTCCCAGTCTTTCTaGAATGCCAGAGATCCAAAG +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHNSQSF*NARDPK
Trigger: CTTTGGATCTCTGGCATTCCAGAAAGACTGGGAATT...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTGCTCCAGCCTTACAATaGGAAACAGAAAGTCTCACT +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFAPALQ*ETESLT
Trigger: AGTGAGACTTTCTGTTTCCCATTGTAAGGCTGGAGC...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTCTGCAGCAACTGAGATaGCAATATGTCCGATGGACA +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLALQQLR*QYVRWT
Trigger: TGTCCATCGGACATATTGCCATCTCAGTTGCTGCAG...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTTTTGGGCATGTGAACTaGTGGCTCTGGGGTAATTCA +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAFGHVN*WLWGNS
Trigger: TGAATTACCCCAGAGCCACCAGTTCACATGCCCAAA...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CAA 72 bp CCCATAAAGTGTCAGCCATCTCTCTGCAAGCTCCTTTaGCAGCTAATGCCTGGCTCTCCTTGCTTCCTTATC +
Preference number: 4 (lower is better)
Translates to: PIKCQPSLCKLL*QLMPGSPCFLI
Trigger: GATAAGGAAGCAAGGAGAGCCAGGCATTAGCTGCAAAAGGAGCTTGCAGAGAGATGGCTGACACTTTATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CAA 72 bp CTACACAGGAGCTGTGTGACTCCCAGTGACTCTAAGTaGTCACAAGAAGCATCTTCAGGACTGTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LHRSCVTPSDSK*SQEASSGLWPV
Trigger: AACTGGCCACAGTCCTGAAGATGCTTCTTGTGACAACTTAGAGTCACTGGGAGTCACACAGCTCCTGTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAATCAGAGGTACCGAGATaGCCACATTCTCGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKSEVPR*PHSRPS
Trigger: GCTTGGACGAGAATGTGGTCATCTCGGTACCTCTGA...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR TCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGGCTCCTCCACCTTCATaGACTCGGTCACAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMAPPPS*TRSQGQ
Trigger: CTGACCTTGTGACCGAGTTCATGAAGGTGGAGGAGC...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATTCACCGAACCATCACTaGACAAAATCCAAGAACTTA +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHSPNHH*TKSKNL
Trigger: TAAGTTCTTGGATTTTGTTCAGTGATGGTTCGGTGA...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAGTCTCTAAAGTCCTGTaGATCCCCCAGCCCCATATC +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKVSKVL*IPQPHI
Trigger: GATATGGGGCTGGGGGATTCACAGGACTTTAGAGAC...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAATGGTCGTCTAGCATCTaGACCTCCCTTCATGTGACC +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKWSSSI*TSLHVT
Trigger: GGTCACATGAAGGGAGGTTCAGATGCTAGACGACCA...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTTAATAATAGTTCTCTaGCAGGGCCCCGACATCCCA +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDLIIVL*QGPDIP
Trigger: TGGGATGTCGGGGCCCTGTCAGAGAACTATTATTAA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTCAGGAGATCTTTTTCTaGGACATCTGGAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAQEIFF*DIWREA
Trigger: AGCTTCTCTCCAGATGTCTCAGAAAAAGATCTCCTG...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAACCCTGGACGGGGCCATaGGAAACAGGAGATCTTTTT +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKPWTGP*ETGDLF
Trigger: AAAAAGATCTCCTGTTTCTCATGGCCCCGTCCAGGG...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTCCAGCATGCCAAAAATaGCTCTGCAGTTTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFPACQK*LCSFKK
Trigger: TTTCTTGAAACTGCAGAGTCATTTTTGGCATGCTGG...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGACTATGTTCTGCAGCTaGGATCCGGTCCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMTMFCS*DPVHLP
Trigger: AGGCAGGTGGACCGGATCTCAGCTGCAGAACATAGT...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTAAAAACCTGACATCCTaGATGGAGACCCAGGAAATA +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFKNLTS*METQEI
Trigger: TATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTT...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTTTTTACCCTCAGAAATaGACTCCAGGAGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAFYPQK*TPGVPH
Trigger: ATGGGGAACTCCTGGAGTGCATTTCTGAGGGTAAAA...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTGTCAGCCATCTCTCTaGAAGCTCCTTTTGCAGCTA +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDCQPSL*KLLLQL
Trigger: TAGCTGCAAAAGGAGCTTGCAGAGAGATGGCTGACA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGCCTGGAGGCAGCGGTTaGAATCCTCAATGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMPGGSG*NPQWFQ
Trigger: CTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGG...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATTATGGTGTTTGCTTATaGCCACAAATAATGTGTGGG +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHYGVCL*PQIMCG
Trigger: CCCACACATTATTTGTGGGCATAAGCAAACACCATA...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAGTCCCCACTGTTTGCTaGCTTGCAATCACCCCAAAG +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKVPTVC*LAITPK
Trigger: CTTTGGGGTGATTGCAAGGCAGCAAACAGTGGGGAC...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGCGGTGCAGACAGCAGTaGTGTCCATTCTGGATGCTG +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMRCRQQ*CPFWML
Trigger: CAGCATCCAGAATGGACACCACTGCTGTCTGCACCG...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGAGATGTGCAAGTTCGTaGGGAGGTAAGCAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMRCASS*GGKQGA
Trigger: CGCTCCCTGCTTACCTCCCCACGAACTTGCACATCT...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATGCACTTTGGGTCTGTTaGAGTAGATGGAGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDALWVC*SRWSCQ
Trigger: TTGACAGCTCCATCTACTCCAACAGACCCAAAGTGC...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGACAGTGACCTCGAACTaGGAGGTGAAGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMTVTSN*EVKCWW
Trigger: CCACCAGCACTTCACCTCCCAGTTCGAGGTCACTGT...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATCTGAACGCCTCTCCTTaGATTAGCTCAGTTATCAGC +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDLNASP*ISSVIS
Trigger: GCTGATAACTGAGCTAATCCAAGGAGAGGCGTTCAG...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGCAACTAACTGAACGCTaGGCTCTGGAGGTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMQLTER*ALEVRP
Trigger: AGGCCTGACCTCCAGAGCCCAGCGTTCAGTTAGTTG...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTAATTCCCAGTCTTTCTaGAATGCCAGAGATCCAAAG +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFNSQSF*NARDPK
Trigger: CTTTGGATCTCTGGCATTCCAGAAAGACTGGGAATT...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGGCATCTTCAGGACTGTaGCCAGTTTCCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMASSGL*PVSSPA
Trigger: AGCAGGGCTGGAAACTGGCCACAGTCCTGAAGATGC...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAACAGGCCAGAGTGCAGTaGTACGATCTTGGCTCACTA +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKQARVQ*YDLGSL
Trigger: TAGTGAGCCAAGATCGTACCACTGCACTCTGGCCTG...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAGTGAACTGGTGGCTCTaGGGTAATTCACTGCACTGC +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKVNWWL*GNSLHC
Trigger: GCAGTGCAGTGAATTACCCCAGAGCCACCAGTTCAC...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTTTGGGCATGTGAACTaGTGGCTCTGGGGTAATTCA +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDFGHVN*WLWGNS
Trigger: TGAATTACCCCAGAGCCACCAGTTCACATGCCCAAA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAGGGCCAGTTCATCTTTaGGCATGTGAACTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKGPVHL*ACELVA
Trigger: AGCCACCAGTTCACATGCCCAAAGATGAACTGGCCC...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CAA 72 bp TTTTTGGCTGCCACGTCATGGCTAGAGGAGGCGGGGTaGTCATGTTCCCACCCAAGGAAATCTATAATAAGA +
Preference number: 4 (lower is better)
Translates to: FLAATSWLEEAG*SCSHPRKSIIR
Trigger: TCTTATTATAGATTTCCTTGGGTGGGAACATGACAACCCCGCCTCCTCTAGCCATGACGTGGCAGCCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGCCCAGCCCATGCCAGTaGCATAAAACAAGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMPSPCQ*HKTRSA
Trigger: TGCAGACCTTGTTTTATGTCACTGGCATGGGCTGGG...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR TCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAGAACCTCCCTTCATGTaGCCACAGAGTTCACTGTCT +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKEPPFM*PQSSLS
Trigger: AGACAGTGAACTCTGTGGTCACATGAAGGGAGGTTC...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTTACCGTCCCTTTACATaGCAGGTGATATGCATTACA +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAYRPFT*QVICIT
Trigger: TGTAATGCATATCACCTGTCATGTAAAGGGACGGTA...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATTTCTTATCTGGAAAATaGTGGTGTCCTAGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHFLSGK*WCPSCL
Trigger: AAGACAACTAGGACACCATCATTTTCCAGATAAGAA...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTCTGAGGCTGGGAACTaGTACCTAAGATGCACATTT +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDSEAGN*YLRCTF
Trigger: AAATGTGCATCTTAGGTATCAGTTCCCAGCCTCAGA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAGGTGTCCATTCTGGATaGTGCACCAAACATTTCCCG +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKGVHSG*CTKHFP
Trigger: CGGGAAATGTTTGGTGCAGCATCCAGAATGGACACC...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAAGAGCTCCATCGTGGTaGCCCCGAGCAGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPRAPSW*PRAGLG
Trigger: TCCCAGCCCTGCTCGGGGGCACCACGATGGAGCTCT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR GCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTGCTTCTCTCCACAAATaGACACCCTTGTCAATGTTT +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAASLHK*TPLSMF
Trigger: AAACATTGACAAGGGTGTGCATTTGTGGAGAGAAGC...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTAGCCAACCATACAGCTaGTTTATGGAACATGCAGAT +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLASQPYS*FMEHAD
Trigger: ATCTGCATGTTCCATAAAGCAGCTGTATGGTTGGCT...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATGCAAGGAGTAGCATTTaGCAGCATGCCAAAAATGAC +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDARSSI*QHAKND
Trigger: GTCATTTTTGGCATGCTGGCAAATGCTACTCCTTGC...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACGCCCCCGAGCAGGGCTaGGATCTCCTCCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNAPEQG*DLLLWF
Trigger: GAACCAGAGGAGGAGATCCCAGCCCTGCTCGGGGGC...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAGCTGGAAACGCTTGCTaGGGGCTCTCCAGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPAGNAC*GLSRPE
Trigger: CTCGGGCCTGGAGAGCCCCCAGCAAGCGTTTCCAGC...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATAGCATTCCATTCCCATaGGAGAGGAAGGGACTTTAT +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDSIPFP*ERKGLY
Trigger: ATAAAGTCCCTTCCTCTCCCATGGGAATGGAATGCT...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAGGTTGCAATCCTCAATaGTTCCAGGTCATACGCTGG +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKGCNPQ*FQVIRW
Trigger: CCAGCGTATGACCTGGAACCATTGAGGATTGCAACC...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAATGGCAATATGTCCGATaGACATTTCCAGGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKWQYVR*TFPGVP
Trigger: GGGCACACCTGGAAATGTCCATCGGACATATTGCCA...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTTGGAGGTTGGACAATTaGTTTTGTTCTTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFWRLDN*FCSWNP
Trigger: TGGATTCCAAGAACAAAACCAATTGTCCAACCTCCA...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTCCCTGTAATGGAGGTTaGACAATTGGTTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFPCNGG*TIGFVL
Trigger: AAGAACAAAACCAATTGTCCAACCTCCATTACAGGG...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGCTTGATGTGAAAGCATaGCCTCCACGCAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMLDVKA*PPRSLQ
Trigger: CTGCAGACTGCGTGGAGGCCATGCTTTCACATCAAG...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613307.1
CDS-3UTR TCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTTCACCGAACCATCACTaGACAAAATCCAAGAACTTA +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLASPNHH*TKSKNL
Trigger: TAAGTTCTTGGATTTTGTTCAGTGATGGTTCGGTGA...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAGGGCACTGCTTCAGGTaGCCCCCTGCAGATCCTTCC +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPGHCFR*PPADPS
Trigger: GGAAGGATCTGCAGGGGGTCACCTGAAGCAGTGCCC...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGTACACAGGAGCTGTGTaGCTCCCAGTGACTCTAAGT +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMYTGAV*LPVTLS
Trigger: ACTTAGAGTCACTGGGAGTCACACAGCTCCTGTGTA...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAACACCCATCTTTCAGCTaGAACATCTACTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKHPSFS*NIYFSL
Trigger: GAGGCTGAAGTAGATGTTTCAGCTGAAAGATGGGTG...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTATTGGGCATTTATTATaGCACGTCAAATTATCGCCA +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFIGHLL*HVKLSP
Trigger: TGGCGATAATTTGACGTGTCATAATAAATGCCCAAT...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTTTCTTATCTGGAAAATaGTGGTGTCCTAGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFFLSGK*WCPSCL
Trigger: AAGACAACTAGGACACCATCATTTTCCAGATAAGAA...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACTCCGGTCCACCTGCCTaGGAAGAGTCTGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNSGPPA*EESEAG
Trigger: CCCAGCCTCAGACTCTTCTCAGGCAGGTGGACCGGA...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAACCGACGTCTGAGTGCTaGCATTATCAATTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKPTSEC*HYQFPP
Trigger: AGGAGGAAATTGATAATGGCAGCACTCAGACGTCGG...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACCATTTACCCTGCTCTaGGTGTCCGGGCGATGGCCC +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPPFTLL*VSGRWP
Trigger: GGGCCATCGCCCGGACACGCAGAGCAGGGTAAATGG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR GCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAACCAAGAACTTACTATTaGTTCCTGCTGTGGGGACTG +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKPRTYY*FLLWGL
Trigger: CAGTCCCCACAGCAGGAAGCAATAGTAAGTTCTTGG...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGTTGCTGCCTCCTTGGTaGTCATCACTACTTGGTTCG +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMLLPPW*SSLLGS
Trigger: CGAACCAAGTAGTGATGAGCACCAAGGAGGCAGCAA...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAACCTCAATATCATTGCTaGCTCCTTGGTGCTCATCAC +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKPQYHC*LLGAHH
Trigger: GTGATGAGCACCAAGGAGGCAGCAATGATATTGAGG...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATAAAAACCTGACATCCTaGATGGAGACCCAGGAAATA +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDKNLTS*METQEI
Trigger: TATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTT...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTATGGAAAGTGTAATCTaGATCTATTGCCTAGGCAAT +
Preference number: 4 (lower is better)
Translates to: QQRASSPSRHLASVPPIFMESVI*IYCLGN
Trigger: ATTGCCTAGGCAATAGATGCAGATTACACTTTCCAT...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAACAGGCCTACATCACTTaGAATTTCAGCACTGTTCCC +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKQAYIT*NFSTVP
Trigger: GGGAACAGTGCTGAAATTGCAAGTGATGTAGGCCTG...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAACCAGTCTTTCTGGAATaGCAGAGATCCAAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKPVFLE*QRSKGR
Trigger: TCTCCCTTTGGATCTCTGGCATTCCAGAAAGACTGG...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTTATGGTGTTTGCTTATaGCCACAAATAATGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAYGVCL*PQIMCG
Trigger: CCCACACATTATTTGTGGGCATAAGCAAACACCATA...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGCACTGTTTGCTGCCTTaGAATCACCCCAAAGCACAC +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMHCLLP*NHPKAH
Trigger: GTGTGCTTTGGGGTGATTGCAAGGCAGCAAACAGTG...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGGTCAACAGGAGCTCCTaGGGGATTATCTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMVNRSS*GIIFST
Trigger: AGTGGAGAAGATAATCCCCCAGGAGCTCCTGTTGAC...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAATCATTGCTGCCTCCTTaGTGCTCATCACTACTTGGT +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKSLLPP*CSSLLG
Trigger: ACCAAGTAGTGATGAGCACCAAGGAGGCAGCAATGA...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAACCCAGGAAATAACATaGCATGGCAAATCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKTQEIT*HGKSQG
Trigger: TCCCTGGGATTTGCCATGCCATGTTATTTCCTGGGT...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATGATAGTAAATTGTGTTaGCCACAAAGCACTTGTATA +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHDSKLC*PQSTCI
Trigger: TATACAAGTGCTTTGTGGCCAACACAATTTACTATC...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTATTTGTATGGATTTTaGGGGGAAACCCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDYLYGF*GETHCF
Trigger: GAAGCAGTGGGTTTCCCCCCAAAATCCATACAAATA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATTGTATATTGACTAGCTaGAAAACAAGGTGCTATAAC +
Preference number: 4 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHCILTS*KTRCYN
Trigger: GTTATAGCACCTTGTTTTCCAGCTAGTCAATATACA...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAATGCACGCTGAGATCTaGGGAGAACTGGTTAAGTTC +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKMHAEI*GELVKF
Trigger: GAACTTAACCAGTTCTCCCCAGATCTCAGCGTGCAT...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CAA 72 bp AGACACACACTACCTCCCTCTAAGAGCACGGGTCTGTaGCATGATACACGCTATGTGGATGTGACTATCTTT +
Preference number: 4 (lower is better)
Translates to: RHTLPPSKSTGL*HDTRYVDVTIF
Trigger: AAAGATAGTCACATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGTGTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGTTAATACATTTGCACTaGGCTCGTACCAGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMLIHLH*ARTRQS
Trigger: GGACTGCCTGGTACGAGCTCAGTGCAAATGTATTAA...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAAATGAGCAGCGCTCATaGCAAATCAGGATAGCTACA +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKNEQRS*QIRIAT
Trigger: TGTAGCTATCCTGATTTGTCATGAGCGCTGCTCATT...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGTCCAGGAGTTCCCCATaGGTTTTCAACAAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMSRSSP*VFNKQR
Trigger: TCTCTGCTTGTTGAAAACTCATGGGGAACTCCTGGA...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATCCTTTACATGACAGGTaGTATGCATTACATCACACA +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDPLHDR*YALHHT
Trigger: TGTGTGATGTAATGCATATCACCTGTCATGTAAAGG...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAACTCCTGACTTCAGGTaGTCTGCCCACCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPTPDFR*SAHLGL
Trigger: GAGGCCCAGGTGGGCAGATCACCTGAAGTCAGGAGT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTCATATGGTCAGTGTTaGCACTGGCATTCTGTTATT +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDSYGQC*HWHSVI
Trigger: AATAACAGAATGCCAGTGTCAACACTGACCATATGA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACAACGGCGAGAGGACCTaGACCGTGGTTATTCCCGGC +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNNGERT*TVVIPG
Trigger: GCCGGGAATAACCACGGTGCAGGTCCTCTCGCCGTT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGCCAAGAACTTACTATTaGTTCCTGCTGTGGGGACTG +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMPRTYY*FLLWGL
Trigger: CAGTCCCCACAGCAGGAAGCAATAGTAAGTTCTTGG...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAATTTTACCCTCAGAAATaGACTCCAGGAGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKFYPQK*TPGVPH
Trigger: ATGGGGAACTCCTGGAGTGCATTTCTGAGGGTAAAA...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCCCCAGTTTGTTCCCTaGACCCCGTCAAGCACTGCC +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNPQFVP*TPSSTA
Trigger: GGCAGTGCTTGACGGGGTGCAGGGAACAAACTGGGG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTAGAATGCTACCAAAATaGACAAAGGTGGACATTCTA +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLARMLPK*TKVDIL
Trigger: TAGAATGTCCACCTTTGTGCATTTTGGTAGCATTCT...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATCATCTCTCTGTAAAGTaGTTTACTCCAATGGGCAAT +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDHLSVK*FTPMGN
Trigger: ATTGCCCATTGGAGTAAAGCACTTTACAGAGAGATG...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAATTATCAATTTCCTCCTaGACTGCCCATTGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKLSISS*TAHWSS
Trigger: TGAGGACCAATGGGCAGTCCAGGAGGAAATTGATAA...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATAAAACAGTAAAGAGATaGCCCTCCCTCACTGTATAT +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDKTVKR*PSLTVY
Trigger: ATATACAGTGAGGGAGGGCCATCTCTTTACTGTTTT...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTAGGTGCTATAACCCATaGTTTATGATCTTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLARCYNP*FMIFRK
Trigger: TTTCCTGAAGATCATAAACCATGGGTTATAGCACCT...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTAGGATTATTATAGTCTaGGAATTTATCCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLARIIIV*EFILAS
Trigger: ACTGGCCAGGATAAATTCCCAGACTATAATAATCCT...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGATGCACGCTGAGATCTaGGGAGAACTGGTTAAGTTC +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMMHAEI*GELVKF
Trigger: GAACTTAACCAGTTCTCCCCAGATCTCAGCGTGCAT...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATGAGATAACAATAACGTaGCAGACTATTTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDEITIT*QTISAP
Trigger: TGGAGCTGAAATAGTCTGCCACGTTATTGTTATCTC...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAAGAAAGGAAGTCACTTaGCAATCAAGTCCCTCCATG +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKRKEVT*QSSPSM
Trigger: CATGGAGGGACTTGATTGCCAAGTGACTTCCTTTCT...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTCGTTTTCAAAATGTTTaGAAGTGCCTTTACAGAGAC +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLARFQNV*KCLYRD
Trigger: GTCTCTGTAAAGGCACTTCCAAACATTTTGAAAACG...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CAA 72 bp ACCCCTGTAATGGAGGTTGGACAATTGGTTTTGTTCTaGGAATCCACACTGAATGCCCTTGCTAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: TPVMEVGQLVLF*ESTLNALARSP
Trigger: TGGACTTCTAGCAAGGGCATTCAGTGTGGATTCCAAGAACAAAACCAATTGTCCAACCTCCATTACAGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAACACATGGAGTATTCTaGGGTTTGCTAGGTGTTGTT +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKTHGVF*GLLGVV
Trigger: AACAACACCTAGCAAACCTCAGAATACTCCATGTGT...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGTCTGAGGCTGGGAACTaGTACCTAAGATGCACATTT +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMSEAGN*YLRCTF
Trigger: AAATGTGCATCTTAGGTATCAGTTCCCAGCCTCAGA...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGGCTCTGAGCTACCTCTaGACCAAACTCTTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMALSYL*TKLFEK
Trigger: CTTTTCAAAGAGTTTGGTGCAGAGGTAGCTCAGAGC...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACAATCCTCTCTCGGGCTaGAAACGCTTGCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNNPLSG*KRLLGA
Trigger: AGCCCCCAGCAAGCGTTTCCAGCCCGAGAGAGGATT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGATTCTAAGAGTGAACTaGTCTGCCACAGAGCTACTG +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMILRVN*SATELL
Trigger: CAGTAGCTCTGTGGCAGACCAGTTCACTCTTAGAAT...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTGATAGTAAATTGTGTTaGCCACAAAGCACTTGTATA +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLADSKLC*PQSTCI
Trigger: TATACAAGTGCTTTGTGGCCAACACAATTTACTATC...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACTGAACGCTGGGCTCTaGAGGTCAGGCCTACATCAC +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPLNAGL*RSGLHH
Trigger: GTGATGTAGGCCTGACCTCCAGAGCCCAGCGTTCAG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATAATTATTCCTTCTCTTaGGACACATGGAGTATTCTG +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDNYSFS*DTWSIL
Trigger: CAGAATACTCCATGTGTCCCAAGAGAAGGAATAATT...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTAAGATGAAAATGTTCTaGCAGATTCCATCATCAATC +
Preference number: 4 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAKMKMF*QIPSSI
Trigger: GATTGATGATGGAATCTGCCAGAACATTTTCATCTT...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGAGAAAGGAAGTCACTTaGCAATCAAGTCCCTCCATG +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMRKEVT*QSSPSM
Trigger: CATGGAGGGACTTGATTGCCAAGTGACTTCCTTTCT...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATAAAAATTATTTGCCATaGGAAGACACACACTACCTC +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDKNYLP*EDTHYL
Trigger: GAGGTAGTGTGTGTCTTCCCATGGCAAATAATTTTT...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATCGTTTTCAAAATGTTTaGAAGTGCCTTTACAGAGAC +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDRFQNV*KCLYRD
Trigger: GTCTCTGTAAAGGCACTTCCAAACATTTTGAAAACG...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CAA 72 bp TGTTGGCCACAAAGCACTTGTATAAATACAGCTATGTaGGGGCCTTTTTACCCTCAGAAATGCACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: CWPQSTCINTAM*GPFYPQKCTPG
Trigger: TCCTGGAGTGCATTTCTGAGGGTAAAAAGGCCCCAACATAGCTGTATTTATACAAGTGCTTTGTGGCCAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CAA 72 bp CTCCTTGCTTCCTTATCCCATCAAACTGAACTACTTTaGGAACTTCATCAGCTTCGGTTCCTAAGCCCCATT +
Preference number: 4 (lower is better)
Translates to: LLASLSHQTELL*ELHQLRFLSPI
Trigger: AATGGGGCTTAGGAACCGAAGCTGATGAAGTTCCAAAAGTAGTTCAGTTTGATGGGATAAGGAAGCAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCGGTCACAAGGTCAGTaGTGTCAAACTGCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNRSQGQ*CQTASR
Trigger: CCGACTGGCAGTTTGACATCACTGACCTTGTGACCG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCTGGATGGTTGGCTCTaGGCTACCTCTGCACCAAAC +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNLDGWL*ATSAPN
Trigger: GTTTGGTGCAGAGGTAGCTCAGAGCCAACCATCCAG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGTGCACATTTCAATTTTaGGACAACAGCATGCCCTGT +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMCTFQF*DNSMPC
Trigger: ACAGGGCATGCTGTTGTCTCAAAATTGAAATGTGCA...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACACTATGTTCTGCAGCTaGGATCCGGTCCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNTMFCS*DPVHLP
Trigger: AGGCAGGTGGACCGGATCTCAGCTGCAGAACATAGT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAGAGGAAGGCTTGATGTaGAAGCATGGCCTCCACGCA +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPEEGLM*KHGLHA
Trigger: TGCGTGGAGGCCATGCTTTCACATCAAGCCTTCCTC...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613307.1
CDS-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACCTTCTCAAGAGGCTTaGTGGTGTCTCCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPPSQEA*WCLPQQ
Trigger: CTGCTGAGGGAGACACCAGCAAGCCTCTTGAGAAGG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACCTGGAGGCAGCGGTTaGAATCCTCAATGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPPGGSG*NPQWFQ
Trigger: CTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTCCCATTCACAAAAATaGAATCACAGTTGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDSHSQK*NHSCWK
Trigger: TTTCCAACAACTGTGATTCCATTTTTGTGAATGGGA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACACAGTGACCTCGAACTaGGAGGTGAAGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNTVTSN*EVKCWW
Trigger: CCACCAGCACTTCACCTCCCAGTTCGAGGTCACTGT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAAAAACAGTAAAGAGATaGCCCTCCCTCACTGTATAT +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKKTVKR*PSLTVY
Trigger: ATATACAGTGAGGGAGGGCCATCTCTTTACTGTTTT...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
43% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGTTCTCTTGGGACACATaGAGTATTCTGAGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMFSWDT*SILRFA
Trigger: AGCAAACCTCAGAATACTCCATGTGTCCCAAGAGAA...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATCCAGGTGTGCCCGATaGAAACGGTCACCAACCAGA +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPSRCAR*KRSPTR
Trigger: TCTGGTTGGTGACCGTTTCCATCGGGCACACCTGGA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACAGGGTGGCCGACGTCTaGGTGCTGCCATTATCAATT +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNRVADV*VLPLSI
Trigger: AATTGATAATGGCAGCACTCAGACGTCGGCCACCCT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR TCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAACATCATTTTCAGAAATaGATTCCCAGTCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKHHFQK*IPSLSG
Trigger: TCCAGAAAGACTGGGAATTCATTTCTGAAAATGATG...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGCCTTTACATGACAGGTaGTATGCATTACATCACACA +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMPLHDR*YALHHT
Trigger: TGTGTGATGTAATGCATATCACCTGTCATGTAAAGG...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAATTGGGCATTTATTATaGCACGTCAAATTATCGCCA +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKIGHLL*HVKLSP
Trigger: TGGCGATAATTTGACGTGTCATAATAAATGCCCAAT...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAATTACAATGTTTCATTTaGACAACTGACCAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKLQCFI*TTDQEQ
Trigger: CTGCTCTTGGTCAGTTGTTCAAATGAAACATTGTAA...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGCACGCTATGTGGATGTaGCTATCTTTCAGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMHAMWM*LSFSVL
Trigger: TAAAACACTGAAAGATAGTCACATCCACATAGCGTG...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAATGCCATCAGAGGGAATaGTCTAATTTTTATGTTCCT +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKCHQRE*SNFYVP
Trigger: AGGAACATAAAAATTAGAGCATTCCCTCTGATGGCA...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACTCTCCAGGCCCGAGTaGATATTGTTCTCCCACTTG +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPLSRPE*ILFSHL
Trigger: CAAGTGGGAGAACAATATCCACTCGGGCCTGGAGAG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATTCTTCGGTCCTGGATaGTTGGCTCTGAGCTACCTC +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPFFGPG*LALSYL
Trigger: GAGGTAGCTCAGAGCCAACCATCCAGGACCGAAGAA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAAGGATTATTATAGTCTaGGAATTTATCCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: WKNLTSCMETQEITWHGKRIIIV*EFILAS
Trigger: ACTGGCCAGGATAAATTCCCAGACTATAATAATCCT...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCAGGCCAGAGTGCAGTaGTACGATCTTGGCTCACTA +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNQARVQ*YDLGSL
Trigger: TAGTGAGCCAAGATCGTACCACTGCACTCTGGCCTG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAAGAAGGCTGAGTGCCTaGGCCAGTGTGCTTATCAGT +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPRRLSA*ASVLIS
Trigger: ACTGATAAGCACACTGGCCCAGGCACTCAGCCTTCT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAAACCACTGGCATGTTTaGACGCTCCCCAGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPNHWHV*TLPSLF
Trigger: GAACAAACTGGGGAGCGTTCAAACATGCCAGTGGTT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACAGTTTCCAGCCCTGCTaGGAAACCACTGGCATGTTT +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNSFQPC*ETTGMF
Trigger: AAACATGCCAGTGGTTTCTCAGCAGGGCTGGAAACT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAAGTTTCCAGCCCTGCTaGGAAACCACTGGCATGTTT +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPSFQPC*ETTGMF
Trigger: AAACATGCCAGTGGTTTCTCAGCAGGGCTGGAAACT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACTGCACTGCAGCAACTaGGATGGCAATATGTCCGAT +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPLHCSN*DGNMSD
Trigger: ATCGGACATATTGCCATCTCAGTTGCTGCAGTGCAG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCACGGGTCTGTTGCATaGTACACGCTATGTGGATGT +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNHGSVA*YTLCGC
Trigger: ACATCCACATAGCGTGTATCATGCAACAGACCCGTG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACAAGAGTGAACTGGTCTaGCACAGAGCTACTGGTCAG +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNKSELV*HRATGQ
Trigger: CTGACCAGTAGCTCTGTGGCAGACCAGTTCACTCTT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACAATTTCCTCCTGGACTaGCCATTGGTCCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNNFLLD*PLVLTA
Trigger: AGCAGTGAGGACCAATGGGCAGTCCAGGAGGAAATT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACTTGCTGCCTCCTTGGTaGTCATCACTACTTGGTTCG +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNLLPPW*SSLLGS
Trigger: CGAACCAAGTAGTGATGAGCACCAAGGAGGCAGCAA...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAAGGTCTCTAGAGCTCTaGCTGTTCTGGAAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPRSLEL*LFWKAQ
Trigger: CTGAGCTTTCCAGAACAGGCAGAGCTCTAGAGACCT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACAGAGCACGGGTCTGTTaGATGATACACGCTATGTGG +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNRARVC*MIHAMW
Trigger: CCACATAGCGTGTATCATGCAACAGACCCGTGCTCT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACAGGACTCCTCTGCATTaGAGATGTGCAAGTTCGTGG +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNRTPLH*RCASSW
Trigger: CCACGAACTTGCACATCTCCAATGCAGAGGAGTCCT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATGGGAGGTGAAGTGCTaGTGGGTGAAGTTCACAATC +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPWEVKC*WVKFTI
Trigger: GATTGTGAACTTCACCCACCAGCACTTCACCTCCCA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAAGCTTTCTTCGGTCCTaGATGGTTGGCTCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPSFLRS*MVGSEL
Trigger: TAGCTCAGAGCCAACCATCCAGGACCGAAGAAAGCT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACGTGTGGGTTATATGGTaGAAGGAACCCTTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNVWVIW*KEPFPH
Trigger: ATGGGGGAAGGGTTCCTTCCACCATATAACCCACAC...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAGGTTGCAATCCTCAATaGTTCCAGGTCATACGCTGG +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPGCNPQ*FQVIRW
Trigger: CCAGCGTATGACCTGGAACCATTGAGGATTGCAACC...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACGGAAAGCAAACATCTTaGCACAGGGTAGATCTTCCG +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNGKQTS*HRVDLP
Trigger: CGGAAGATCTACCCTGTGTCAAGATGTTTGCTTTCC...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATTAATAATAGTTCTCTaGCAGGGCCCCGACATCCCA +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPLIIVL*QGPDIP
Trigger: TGGGATGTCGGGGCCCTGTCAGAGAACTATTATTAA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATTACACCCAGTTACCTaGATGATGTCTGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPLHPVT*MMSEGP
Trigger: AGGCCCTTCAGACATCATTCAGGTAACTGGGTGTAA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACAGCGAGGAAAACTTCTaGAGGCTATCCACAATCCCT +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNSEENF*RLSTIP
Trigger: AGGGATTGTGGATAGCCTGCAGAAGTTTTCCTCGCT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACTGGCCGACGTCTGAGTaGTGCCATTATCAATTTCCT +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNWPTSE*CHYQFP
Trigger: AGGAAATTGATAATGGCAGCACTCAGACGTCGGCCA...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCCTCAATATCATTGCTaGCTCCTTGGTGCTCATCAC +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNPQYHC*LLGAHH
Trigger: GTGATGAGCACCAAGGAGGCAGCAATGATATTGAGG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCAGGCCTACATCACTTaGAATTTCAGCACTGTTCCC +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNQAYIT*NFSTVP
Trigger: GGGAACAGTGCTGAAATTGCAAGTGATGTAGGCCTG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATGTCAGCCATCTCTCTaGAAGCTCCTTTTGCAGCTA +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPCQPSL*KLLLQL
Trigger: TAGCTGCAAAAGGAGCTTGCAGAGAGATGGCTGACA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAAGAGGCAGGAAATCCTaGCTCAGTTTCACAAAGCCA +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPRGRKS*LSFTKP
Trigger: TGGCTTTGTGAAACTGAGGCAGGATTTCCTGCCTCT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGGATAACATTATTGCTTaGTTGGACTGGGAAGATAAT +
Preference number: 4 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMDNIIA*LDWEDN
Trigger: ATTATCTTCCCAGTCCAAGCAAGCAATAATGTTATC...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACAGTGTGCTTATCAGTaGCAGATGTGTGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPQCAYQ*QMCAPS
Trigger: AGAAGGAGCACACATCTGGCACTGATAAGCACACTG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCAGTGTGCTTATCAGTaGCAGATGTGTGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNQCAYQ*QMCAPS
Trigger: AGAAGGAGCACACATCTGGCACTGATAAGCACACTG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACTCTGGGGTAATTCACTaGACTGCAGCAACTGAGATG +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNSGVIH*TAATEM
Trigger: CATCTCAGTTGCTGCAGTGCAGTGAATTACCCCAGA...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATCTGGGGTAATTCACTaGACTGCAGCAACTGAGATG +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPSGVIH*TAATEM
Trigger: CATCTCAGTTGCTGCAGTGCAGTGAATTACCCCAGA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACTCATTGCTGCCTCCTTaGTGCTCATCACTACTTGGT +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNSLLPP*CSSLLG
Trigger: ACCAAGTAGTGATGAGCACCAAGGAGGCAGCAATGA...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACACCCAGGAAATAACATaGCATGGCAAATCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNTQEIT*HGKSQG
Trigger: TCCCTGGGATTTGCCATGCCATGTTATTTCCTGGGT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACACAGAGTTCACTGTCTaGTGCCTTCTCAAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNTEFTV*CLLKRL
Trigger: AAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAAATGAGCAGCGCTCATaGCAAATCAGGATAGCTACA +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPNEQRS*QIRIAT
Trigger: TGTAGCTATCCTGATTTGTCATGAGCGCTGCTCATT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACAGGAGATCTTTTTCTaGGACATCTGGAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPQEIFF*DIWREA
Trigger: AGCTTCTCTCCAGATGTCTCAGAAAAAGATCTCCTG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAGCTCTGAGCTACCTCTaGACCAAACTCTTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPALSYL*TKLFEK
Trigger: CTTTTCAAAGAGTTTGGTGCAGAGGTAGCTCAGAGC...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACGCAAGGAGTAGCATTTaGCAGCATGCCAAAAATGAC +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNARSSI*QHAKND
Trigger: GTCATTTTTGGCATGCTGGCAAATGCTACTCCTTGC...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACAGTGGTGTCCATTCTaGATGCTGCACCAAACATTT +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPQWCPF*MLHQTF
Trigger: AAATGTTTGGTGCAGCATCCAGAATGGACACCACTG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAAGCATTCCATTCCCATaGGAGAGGAAGGGACTTTAT +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPSIPFP*ERKGLY
Trigger: ATAAAGTCCCTTCCTCTCCCATGGGAATGGAATGCT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
3UTR CAA 72 bp AGAAATGAATCCCACCAGACCTCCACAAATCAAACTTaGTTAAATCATCCCCTATTGCTGATCAAACTCACT +
Preference number: 4 (lower is better)
Translates to: RNESHQTSTNQT*LNHPLLLIKLT
Trigger: AGTGAGTTTGATCAGCAATAGGGGATGATTTAACAAAGTTTGATTTGTGGAGGTCTGGTGGGATTCATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAACACATGGAGTATTCTaGGGTTTGCTAGGTGTTGTT +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPTHGVF*GLLGVV
Trigger: AACAACACCTAGCAAACCTCAGAATACTCCATGTGT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATACCGTCCCTTTACATaGCAGGTGATATGCATTACA +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPYRPFT*QVICIT
Trigger: TGTAATGCATATCACCTGTCATGTAAAGGGACGGTA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACCAGCATGCCAAAAATaGCTCTGCAGTTTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPPACQK*LCSFKK
Trigger: TTTCTTGAAACTGCAGAGTCATTTTTGGCATGCTGG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATGCACATTTCAATTTTaGGACAACAGCATGCCCTGT +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPCTFQF*DNSMPC
Trigger: ACAGGGCATGCTGTTGTCTCAAAATTGAAATGTGCA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAAGCCAACCATACAGCTaGTTTATGGAACATGCAGAT +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPSQPYS*FMEHAD
Trigger: ATCTGCATGTTCCATAAAGCAGCTGTATGGTTGGCT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACGAGCTGTCAAGGATGTaGGATTTCAATTTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNELSRM*DFNFQL
Trigger: CAACTGGAAATTGAAATCCCACATCCTTGACAGCTC...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACTATTTGTATGGATTTTaGGGGGAAACCCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNYLYGF*GETHCF
Trigger: GAAGCAGTGGGTTTCCCCCCAAAATCCATACAAATA...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACGCGTTTATATACATCTaGGTGTGGGTTATATGGTGG +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNAFIYI*VWVIWW
Trigger: CCACCATATAACCCACACCCAGATGTATATAAACGC...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAGCGTTTATATACATCTaGGTGTGGGTTATATGGTGG +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPAFIYI*VWVIWW
Trigger: CCACCATATAACCCACACCCAGATGTATATAAACGC...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACTGTTTTGTTTCTGTTTaGGACAAAGTCTCGCTCTTG +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNCFVSV*DKVSLL
Trigger: CAAGAGCGAGACTTTGTCTCAAACAGAAACAAAACA...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATGTTTTGTTTCTGTTTaGGACAAAGTCTCGCTCTTG +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPCFVSV*DKVSLL
Trigger: CAAGAGCGAGACTTTGTCTCAAACAGAAACAAAACA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATCATATGGTCAGTGTTaGCACTGGCATTCTGTTATT +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPSYGQC*HWHSVI
Trigger: AATAACAGAATGCCAGTGTCAACACTGACCATATGA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCACGCTATGTGGATGTaGCTATCTTTCAGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNHAMWM*LSFSVL
Trigger: TAAAACACTGAAAGATAGTCACATCCACATAGCGTG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACAAACCTCTTTTACCTaGTTAGAAATGAATCCCACC +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPQTSFT*LEMNPT
Trigger: GGTGGGATTCATTTCTAAGCAGGTAAAAGAGGTTTG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCATCTCTCTGTAAAGTaGTTTACTCCAATGGGCAAT +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNHLSVK*FTPMGN
Trigger: ATTGCCCATTGGAGTAAAGCACTTTACAGAGAGATG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACTTCCTTGTGAGGTCTTaGTTGGCTTCTTTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNFLVRS*LASLRK
Trigger: TTTCCTTAAAGAAGCCAACCAAGACCTCACAAGGAA...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAATATACATCTGGGTGTaGGTTATATGGTGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPIYIWV*VIWWKE
Trigger: TTCCTTCCACCATATAACCCACACCCAGATGTATAT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACGAGATAACAATAACGTaGCAGACTATTTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNEITIT*QTISAP
Trigger: TGGAGCTGAAATAGTCTGCCACGTTATTGTTATCTC...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCCCTGTAATGGAGGTTaGACAATTGGTTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNPCNGG*TIGFVL
Trigger: AAGAACAAAACCAATTGTCCAACCTCCATTACAGGG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATGGAATCACAGTTGTTaGAAACACTCAAAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPWNHSC*KHSKWR
Trigger: TCTCCACTTTGAGTGTTTCCAACAACTGTGATTCCA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613307.1
CDS-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACTTATCCCATCAAACTaGACTACTTTTGGAACTTCA +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPLIPSN*TTFGTS
Trigger: TGAAGTTCCAAAAGTAGTTCAGTTTGATGGGATAAG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCATCATTTTCAGAAATaGATTCCCAGTCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNHHFQK*IPSLSG
Trigger: TCCAGAAAGACTGGGAATTCATTTCTGAAAATGATG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR TCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATTACAATGTTTCATTTaGACAACTGACCAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPLQCFI*TTDQEQ
Trigger: CTGCTCTTGGTCAGTTGTTCAAATGAAACATTGTAA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAGTAATCTGCATCTATTaGCTAGGCAATTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPVICIY*LGNFLS
Trigger: AGAAAGGAAATTGCCTAGGCAATAGATGCAGATTAC...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACGTAATCTGCATCTATTaGCTAGGCAATTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNVICIY*LGNFLS
Trigger: AGAAAGGAAATTGCCTAGGCAATAGATGCAGATTAC...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACAGAATGCTACCAAAATaGACAAAGGTGGACATTCTA +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNRMLPK*TKVDIL
Trigger: TAGAATGTCCACCTTTGTGCATTTTGGTAGCATTCT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAAAACTGAACTACTTTTaGAACTTCATCAGCTTCGGT +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPKLNYF*NFISFG
Trigger: ACCGAAGCTGATGAAGTTCCAAAAGTAGTTCAGTTT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCATAGTTATGGTGTTTaGTTATGCCCACAAATAATG +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNHSYGV*LCPQIM
Trigger: CATTATTTGTGGGCATAAGCAAACACCATAACTATG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR GCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACATAGTTATGGTGTTTaGTTATGCCCACAAATAATG +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPHSYGV*LCPQIM
Trigger: CATTATTTGTGGGCATAAGCAAACACCATAACTATG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACTCCCATTCACAAAAATaGAATCACAGTTGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNSHSQK*NHSCWK
Trigger: TTTCCAACAACTGTGATTCCATTTTTGTGAATGGGA...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACTGTATATTGACTAGCTaGAAAACAAGGTGCTATAAC +
Preference number: 4 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNCILTS*KTRCYN
Trigger: GTTATAGCACCTTGTTTTCCAGCTAGTCAATATACA...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CCA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAAAGATGAAAATGTTCTaGCAGATTCCATCATCAATC +
Preference number: 4 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPKMKMF*QIPSSI
Trigger: GATTGATGATGGAATCTGCCAGAACATTTTCATCTT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS CCA 90 bp CCGGCGCTGGCGGCGCTTCCTCGGCTGCGCCTCTGCGCGCTCTCCTaGGCTCGGCCGTGCGTGGCTGGGGAGCTGGGGCGGCCGAGGCTC +
Preference number: 5 (lower is better)
Translates to: PALAALPRLRLCALS*ARPCVAGELGRPRL
Trigger: GAGCCTCGGCCGCCCCAGCTCCCCAGCCACGCACGGCCGAGCCCAGGAGAGCGCGCAGAGGCGCAGCCGAGGAAGCGCCGCCAGCGCCGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682704.1
CDS GCA 90 bp GCCGGGCATGGCTCGCTCCCAGCGCGCCGCTCCTCCCCAGACGCATaGGCCGGCGCTGGCGGCGCTTCCTCGGCTGCGCCTCTGCGCGCT +
Preference number: 5 (lower is better)
Translates to: AGHGSLPARRSSPDA*AGAGGASSAAPLRA
Trigger: AGCGCGCAGAGGCGCAGCCGAGGAAGCGCCGCCAGCGCCGGCGCATGCGTCTGGGGAGGAGCGGCGCGCTGGGAGCGAGCCATGCCCGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682704.1
CDS GCA 90 bp CAGACGCATGCGCCGGCGCTGGCGGCGCTTCCTCGGCTGCGCCTCTaGGCGCTCTCCTGGGCTCGGCCGTGCGTGGCTGGGGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: QTHAPALAALPRLRL*ALSWARPCVAGELG
Trigger: CCCCAGCTCCCCAGCCACGCACGGCCGAGCCCAGGAGAGCGCGCAGAGGCGCAGCCGAGGAAGCGCCGCCAGCGCCGGCGCATGCGTCTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682704.1
CDS CCA 90 bp CTCGCTCCCAGCGCGCCGCTCCTCCCCAGACGCATGCGCCGGCGCTaGCGGCGCTTCCTCGGCTGCGCCTCTGCGCGCTCTCCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: LAPSAPLLPRRMRRR*RRFLGCASARSPGL
Trigger: GAGCCCAGGAGAGCGCGCAGAGGCGCAGCCGAGGAAGCGCCGCCAGCGCCGGCGCATGCGTCTGGGGAGGAGCGGCGCGCTGGGAGCGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682704.1
CDS TCA 90 bp CCTCCTCCAGAGGACACTGGCCAGCCTTGTCAGCTGGGTAGAGCGTaGAGAAGAGCTCCATCGTGGTGCCCCCGAGCAGGGCTGGGATCT +
Preference number: 5 (lower is better)
Translates to: PPPEDTGQPCQLGRA*RRAPSWCPRAGLGS
Trigger: AGATCCCAGCCCTGCTCGGGGGCACCACGATGGAGCTCTTCTTCACGCTCTACCCAGCTGACAAGGCTGGCCAGTGTCCTCTGGAGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS CCA 90 bp CCACTTGCCTTCCTCCTCCAGAGGACACTGGCCAGCCTTGTCAGCTaGGTAGAGCGTGAAGAAGAGCTCCATCGTGGTGCCCCCGAGCAG +
Preference number: 5 (lower is better)
Translates to: PLAFLLQRTLASLVS*VEREEELHRGAPEQ
Trigger: CTGCTCGGGGGCACCACGATGGAGCTCTTCTTCACGCTCTACCCAGCTGACAAGGCTGGCCAGTGTCCTCTGGAGGAGGAAGGCAAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS GCA 90 bp CTTGCTGGGGGCTCTCCAGGCCCGAGTGGATATTGTTCTCCCACTTaGCTTCCTCCTCCAGAGGACACTGGCCAGCCTTGTCAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: LAGGSPGPSGYCSPT*LPPPEDTGQPCQLG
Trigger: ACCCAGCTGACAAGGCTGGCCAGTGTCCTCTGGAGGAGGAAGGCAAGTGGGAGAACAATATCCACTCGGGCCTGGAGAGCCCCCAGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS CCA 90 bp CTCTCTCGGGCTGGAAACGCTTGCTGGGGGCTCTCCAGGCCCGAGTaGATATTGTTCTCCCACTTGCCTTCCTCCTCCAGAGGACACTGG +
Preference number: 5 (lower is better)
Translates to: LSRAGNACWGLSRPE*ILFSHLPSSSRGHW
Trigger: CCAGTGTCCTCTGGAGGAGGAAGGCAAGTGGGAGAACAATATCCACTCGGGCCTGGAGAGCCCCCAGCAAGCGTTTCCAGCCCGAGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS CCA 90 bp GGGGAGAGGGTGCTCCCCCGGTGCAGACAGCAGTGGTGTCCATTCTaGATGCTGCACCAAACATTTCCCGTAGAGTCTGGAGCTGAGGCG +
Preference number: 5 (lower is better)
Translates to: GERVLPRCRQQWCPF*MLHQTFPVESGAEA
Trigger: CGCCTCAGCTCCAGACTCTACGGGAAATGTTTGGTGCAGCATCCAGAATGGACACCACTGCTGTCTGCACCGGGGGAGCACCCTCTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535330.1
CDS TCA 90 bp ATCCATTTACCCTGCTCTGCGTGTCCGGGCGATGGCCCATGCAGGTaGGGGTGGCCGACGTCTGAGTGCTGCCATTATCAATTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: IHLPCSACPGDGPCR*GWPTSECCHYQFPP
Trigger: AGGAGGAAATTGATAATGGCAGCACTCAGACGTCGGCCACCCTCACCTGCATGGGCCATCGCCCGGACACGCAGAGCAGGGTAAATGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS CCA 90 bp ATCTTGGGTTGGGTAGACCACCACACTCCCAATCCTCTCTCGGGCTaGAAACGCTTGCTGGGGGCTCTCCAGGCCCGAGTGGATATTGTT +
Preference number: 5 (lower is better)
Translates to: ILGWVDHHTPNPLSG*KRLLGALQARVDIV
Trigger: AACAATATCCACTCGGGCCTGGAGAGCCCCCAGCAAGCGTTTCCAGCCCGAGAGAGGATTGGGAGTGTGGTGGTCTACCCAACCCAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS-3UTR CAA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATTTCGGTCCTGGATGGTaGGCTCTGAGCTACCTCTGC +
Preference number: 5 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHFGPGW*ALSYLC
Trigger: GCAGAGGTAGCTCAGAGCCAACCATCCAGGACCGAA...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATAGCCCCTCTAGGCACTaGGCAAGTGTACCACCCATC +
Preference number: 5 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHSPSRH*ASVPPI
Trigger: GATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCT...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS TCA 90 bp AGGTGGCCGTGTCCCCTTCCCGGACTAGATTCAGAGGTACCGAGATaGCCACATTCTCGTCCAAGCTCACCAGGGACCACTTCAGATCAT +
Preference number: 5 (lower is better)
Translates to: RWPCPLPGLDSEVPR*PHSRPSSPGTTSDH
Trigger: ATGATCTGAAGTGGTCCCTGGTGAGCTTGGACGAGAATGTGGTCATCTCGGTACCTCTGAATCTAGTCCGGGAAGGGGACACGGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS CCA 90 bp ATTCTCGTCCAAGCTCACCAGGGACCACTTCAGATCATCTTGGGTTaGGTAGACCACCACACTCCCAATCCTCTCTCGGGCTGGAAACGC +
Preference number: 5 (lower is better)
Translates to: ILVQAHQGPLQIILG*VDHHTPNPLSGWKR
Trigger: GCGTTTCCAGCCCGAGAGAGGATTGGGAGTGTGGTGGTCTACCCAACCCAAGATGATCTGAAGTGGTCCCTGGTGAGCTTGGACGAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS-3UTR CAA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTCCCTGGAGGCAGCGGTaGCAATCCTCAATGGTTCCA +
Preference number: 5 (lower is better)
Translates to: QQRASSPSRHLASVPPIFPWRQR*QSSMVP
Trigger: TGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGG...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATGACTTTCAACATGGTTaGACCCTGGACGGGGCCATG +
Preference number: 5 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHDFQHG*TLDGAM
Trigger: CATGGCCCCGTCCAGGGTCAAACCATGTTGAAAGTC...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTAGCCCCTCTAGGCACTaGGCAAGTGTACCACCCATC +
Preference number: 5 (lower is better)
Translates to: QQRASSPSRHLASVPPIFSPSRH*ASVPPI
Trigger: GATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCT...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATACTTGTCCCCACTGTTaGCTGCCTTGCAATCACCCC +
Preference number: 5 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHTCPHC*LPCNHP
Trigger: GGGGTGATTGCAAGGCAGCAAACAGTGGGGACAAGT...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS GCA 90 bp GGTGGCCGACGTCTGAGTGCTGCCATTATCAATTTCCTCCTGGACTaGCCATTGGTCCTCACTGCTGACTCTCACTGCCGTTATCTTCAC +
Preference number: 5 (lower is better)
Translates to: GGRRLSAAIINFLLD*PLVLTADSHCRYLH
Trigger: GTGAAGATAACGGCAGTGAGAGTCAGCAGTGAGGACCAATGGGCAGTCCAGGAGGAAATTGATAATGGCAGCACTCAGACGTCGGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS-3UTR CAA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATATCATTGCTGCCTCCTaGGTGCTCATCACTACTTGG +
Preference number: 5 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHIIAAS*VLITTW
Trigger: CCAAGTAGTGATGAGCACCAAGGAGGCAGCAATGAT...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTTCGGTCCTGGATGGTaGGCTCTGAGCTACCTCTGC +
Preference number: 5 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDFGPGW*ALSYLC
Trigger: GCAGAGGTAGCTCAGAGCCAACCATCCAGGACCGAA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTCCACTGTTTGCTGCCTaGCAATCACCCCAAAGCACA +
Preference number: 5 (lower is better)
Translates to: QQRASSPSRHLASVPPIFPLFAA*QSPQST
Trigger: TGTGCTTTGGGGTGATTGCAAGGCAGCAAACAGTGG...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS TCA 90 bp GCAAATAAGAACACAGTCAGGCTGAGCAAGTCACCGAGGAAGGCTTaGTGTGAAAGCATGGCCTCCACGCAGTCTGCAGGATCTACACCT +
Preference number: 5 (lower is better)
Translates to: ANKNTVRLSKSPRKA*CESMASTQSAGSTP
Trigger: AGGTGTAGATCCTGCAGACTGCGTGGAGGCCATGCTTTCACATCAAGCCTTCCTCGGTGACTTGCTCAGCCTGACTGTGTTCTTATTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535886.2
ENST00000613307.1
CDS-3UTR CAA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGCGGGTAGGCCTTCTGTaGGCAGCAACCGGGATCCTC +
Preference number: 5 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMRVGLL*AATGIL
Trigger: GAGGATCCCGGTTGCTGCCAACAGAAGGCCTACCCG...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTACCACAATTGGCCATTaGGACTCAAGGTTTGCCTGG +
Preference number: 5 (lower is better)
Translates to: QQRASSPSRHLASVPPIFTTIGH*DSRFAW
Trigger: CCAGGCAAACCTTGAGTCCAAATGGCCAATTGTGGT...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTCTTAATCAAAGGCCCTaGTCCTTCACCCTCTGCAAC +
Preference number: 5 (lower is better)
Translates to: QQRASSPSRHLASVPPIFLNQRP*SFTLCN
Trigger: GTTGCAGAGGGTGAAGGACAAGGGCCTTTGATTAAG...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATTCAGGCCTACATCACTaGCAATTTCAGCACTGTTCC +
Preference number: 5 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHSGLHH*QFQHCS
Trigger: GGAACAGTGCTGAAATTGCAAGTGATGTAGGCCTGA...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTCTGGGCTGTGTAGGTTaGGCCACTCACTATGTTCTG +
Preference number: 5 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLALGCVG*ATHYVL
Trigger: CAGAACATAGTGAGTGGCCAAACCTACACAGCCCAG...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTAATGCCAGACAAAACTaGTCCCCACTGTTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: QQRASSPSRHLASVPPIFNARQN*SPLFAA
Trigger: GGCAGCAAACAGTGGGGACAAGTTTTGTCTGGCATT...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS CCA 90 bp CCTCCATGTGAAAGACAAAAGGGAGTGGTGGAGACTACAGTGAGCTaGAGGGCACAGGTTTTATGCAGAGGAGCATCCTCTCTTCAACTC +
Preference number: 5 (lower is better)
Translates to: PPCERQKGVVETTVS*RAQVLCRGASSLQL
Trigger: GAGTTGAAGAGAGGATGCTCCTCTGCATAAAACCTGTGCCCTCCAGCTCACTGTAGTCTCCACCACTCCCTTTTGTCTTTCACATGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534945.2
CDS-3UTR CAA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCAGCCCTGGGGCCCCTaGCAGCCGACAGCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNQPWGP*QPTAGC
Trigger: GCAGCCAGCTGTCGGCTGCAAGGGGCCCCAGGGCTG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CAA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATCCACTTCAGATCATCTaGGGTTGGGTAGACCACCAC +
Preference number: 5 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDPLQII*GWVDHH
Trigger: GTGGTGGTCTACCCAACCCAAGATGATCTGAAGTGG...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CAA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATAGGTCACTAGGATTATaGGGGTCCGGTGACTTCCCT +
Preference number: 5 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDRSLGL*GSGDFP
Trigger: AGGGAAGTCACCGGACCCCAATAATCCTAGTGACCT...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTTCAGTTATCAGCCATTaGGAGTCAGGGCACTGCTTC +
Preference number: 5 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLASVISH*ESGHCF
Trigger: GAAGCAGTGCCCTGACTCCAAATGGCTGATAACTGA...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTTACAGGAAGAACTTTTaGGCTGCCACGTCATGGCTA +
Preference number: 5 (lower is better)
Translates to: QQRASSPSRHLASVPPIFYRKNF*AATSWL
Trigger: TAGCCATGACGTGGCAGCCAAAAAGTTCTTCCTGTA...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTAATGCCTGGCTCTCCTaGCTTCCTTATCCCATCAAA +
Preference number: 5 (lower is better)
Translates to: QQRASSPSRHLASVPPIFNAWLS*LPYPIK
Trigger: TTTGATGGGATAAGGAAGCAAGGAGAGCCAGGCATT...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATAAAGGGCTGGACCAGTaGAGTTCTGTGTCAGTGCTC +
Preference number: 5 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDKGLDQ*SSVSVL
Trigger: GAGCACTGACACAGAACTCAACTGGTCCAGCCCTTT...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATCCACTGTTTGCTGCCTaGCAATCACCCCAAAGCACA +
Preference number: 5 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDPLFAA*QSPQST
Trigger: TGTGCTTTGGGGTGATTGCAAGGCAGCAAACAGTGG...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS TCA 90 bp CACGCAGCCTCTACTGCAGAAAGGGCCACCAGGATGGAGAGGAAATaGAGAGATTCTGGTAGGACTTGGACATCAATTAGCTATGATGGG +
Preference number: 5 (lower is better)
Translates to: HAASTAERATRMERK*RDSGRTWTSISYDG
Trigger: CCCATCATAGCTAATTGATGTCCAAGTCCTACCAGAATCTCTTCATTTCCTCTCCATCCTGGTGGCCCTTTCTGCAGTAGAGGCTGCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535330.1
CDS GCA 90 bp AATTTCCTCCTGGACTGCCCATTGGTCCTCACTGCTGACTCTCACTaGCGTTATCTTCACACCTGCTGCCGCCTTAATTCTAAGAGTGAA +
Preference number: 5 (lower is better)
Translates to: NFLLDCPLVLTADSH*RYLHTCCRLNSKSE
Trigger: TTCACTCTTAGAATTAAGGCGGCAGCAGGTGTGAAGATAACGGCAGTGAGAGTCAGCAGTGAGGACCAATGGGCAGTCCAGGAGGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS-3UTR CAA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGCTCCTGGACTGCCCATaGGTCCTCACTGCTGACTCT +
Preference number: 5 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMLLDCP*VLTADS
Trigger: AGAGTCAGCAGTGAGGACCAATGGGCAGTCCAGGAG...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CAA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATCTTAATCAAAGGCCCTaGTCCTTCACCCTCTGCAAC +
Preference number: 5 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDLNQRP*SFTLCN
Trigger: GTTGCAGAGGGTGAAGGACAAGGGCCTTTGATTAAG...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATATGCCCTCAATATCATaGCTGCCTCCTTGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDMPSIS*LPPWCS
Trigger: TGAGCACCAAGGAGGCAGCAATGATATTGAGGGCAT...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATTCTGCACCAAACTCTTaGAAAAGCTTTTGGCTGACT +
Preference number: 5 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHSAPNS*KSFWLT
Trigger: AGTCAGCCAAAAGCTTTTCAAAGAGTTTGGTGCAGA...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTAAACCACTGGCATGTTaGAACGCTCCCCAGTTTGTT +
Preference number: 5 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAKPLAC*NAPQFV
Trigger: AACAAACTGGGGAGCGTTCAAACATGCCAGTGGTTT...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGCCCTGGAGGCAGCGGTaGCAATCCTCAATGGTTCCA +
Preference number: 5 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMPWRQR*QSSMVP
Trigger: TGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGG...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATATGCACATTTCAATTTaGAGACAACAGCATGCCCTG +
Preference number: 5 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHMHISI*RQQHAL
Trigger: CAGGGCATGCTGTTGTCTCAAAATTGAAATGTGCAT...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCATCGGGCTGGAAACGCTaGCTGGGGGCTCTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPSGWKR*LGALQA
Trigger: GGCCTGGAGAGCCCCCAGCAAGCGTTTCCAGCCCGA...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CAA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAAGGTCACTAGGATTATaGGGGTCCGGTGACTTCCCT +
Preference number: 5 (lower is better)
Translates to: WKNLTSCMETQEITWHGKRSLGL*GSGDFP
Trigger: AGGGAAGTCACCGGACCCCAATAATCCTAGTGACCT...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTCACAAATGCACACCCTaGTCAATGTTTTATCTCTGC +
Preference number: 5 (lower is better)
Translates to: QQRASSPSRHLASVPPIFHKCTP*SMFYLC
Trigger: GCAGAGATAAAACATTGACAAGGGTGTGCATTTGTG...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTACAGGAAGAACTTTTaGGCTGCCACGTCATGGCTA +
Preference number: 5 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDYRKNF*AATSWL
Trigger: TAGCCATGACGTGGCAGCCAAAAAGTTCTTCCTGTA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAACTCTGCAAGCTCCTTTaGCAGCTAATGCCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: WKNLTSCMETQEITWHGKLCKLL*QLMPGS
Trigger: AGAGCCAGGCATTAGCTGCAAAAGGAGCTTGCAGAG...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTCAAAGGGAGAGACGATaGAAAAGCCTCATAGAAGGA +
Preference number: 5 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAQRERR*KSLIEG
Trigger: TCCTTCTATGAGGCTTTTCAATCGTCTCTCCCTTTG...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATAAACCACTGGCATGTTaGAACGCTCCCCAGTTTGTT +
Preference number: 5 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDKPLAC*NAPQFV
Trigger: AACAAACTGGGGAGCGTTCAAACATGCCAGTGGTTT...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp AGCACATCTGGACCCTGGAGGCAGCGGTTGCAATCCTCAATGGTTCCAGGTCATAAGTTGATAACATTATaGCTTGCTTGGACTGGGAAG +
Preference number: 5 (lower is better)
Translates to: STSGPWRQRLQSSMVPGHKLITL*LAWTGK
Trigger: CTTCCCAGTCCAAGCAAGCAATAATGTTATCAACTT...ATGACCTGGAACCATTGAGGATTGCAACCGCTGCCTCCAGGGTCCAGATGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTGTCTCACTTGCTTTTTaGGCCACAGGAAGTACAGAA +
Preference number: 5 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAVSLAF*ATGSTE
Trigger: TTCTGTACTTCCTGTGGCCAAAAAAGCAAGTGAGAC...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTATGGAGGTTGGACAATaGGTTTTGTTCTTGGAATCC +
Preference number: 5 (lower is better)
Translates to: QQRASSPSRHLASVPPIFMEVGQ*VLFLES
Trigger: GGATTCCAAGAACAAAACCAATTGTCCAACCTCCAT...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGACTTGTCCCCACTGTTaGCTGCCTTGCAATCACCCC +
Preference number: 5 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMTCPHC*LPCNHP
Trigger: GGGGTGATTGCAAGGCAGCAAACAGTGGGGACAAGT...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS TCA 90 bp TGTGATACCGCGACAGTCTATTTGATCACCCAGGCAGCTACTAAATaGCTCAGAGGTGGGTGGTATCTACAGCATGGATATGCCAGACAA +
Preference number: 5 (lower is better)
Translates to: CDTATVYLITQAATK*LRGGWYLQHGYARQ
Trigger: TTGTCTGGCATATCCATGCTGTAGATACCACCCACCTCTGAGTCATTTAGTAGCTGCCTGGGTGATCAAATAGACTGTCGCGGTATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534945.2
CDS-3UTR CAA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGTCAGATCATCTTGGGTaGGGTAGACCACCACACTCC +
Preference number: 5 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMSDHLG*GRPPHS
Trigger: GGAGTGTGGTGGTCTACCCAACCCAAGATGATCTGA...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CAA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAATCATTGCTGCCTCCTaGGTGCTCATCACTACTTGG +
Preference number: 5 (lower is better)
Translates to: WKNLTSCMETQEITWHGKIIAAS*VLITTW
Trigger: CCAAGTAGTGATGAGCACCAAGGAGGCAGCAATGAT...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAATGCCCTCAATATCATaGCTGCCTCCTTGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: WKNLTSCMETQEITWHGKMPSIS*LPPWCS
Trigger: TGAGCACCAAGGAGGCAGCAATGATATTGAGGGCAT...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTTGTAATCTGCATCTATaGCCTAGGCAATTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: QQRASSPSRHLASVPPIFCNLHL*PRQFPF
Trigger: GAAAGGAAATTGCCTAGGCAATAGATGCAGATTACA...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATCCCAGTGACTCTAAGTaGTCACAAGAAGCATCTTCA +
Preference number: 5 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDPSDSK*SQEASS
Trigger: TGAAGATGCTTCTTGTGACAACTTAGAGTCACTGGG...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTCAATTATTCCTTCTCTaGGGACACATGGAGTATTCT +
Preference number: 5 (lower is better)
Translates to: QQRASSPSRHLASVPPIFQLFLL*GHMEYS
Trigger: AGAATACTCCATGTGTCCCAAGAGAAGGAATAATTG...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGAAAGGGCTGGACCAGTaGAGTTCTGTGTCAGTGCTC +
Preference number: 5 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMKGLDQ*SSVSVL
Trigger: GAGCACTGACACAGAACTCAACTGGTCCAGCCCTTT...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp CAACAGAGAGCCTCTAGCCCCTCTAGGCACTTGGCAAGTGTACCACCCATCTTTGGTGTCCTAGTTGTCTaGAGTCATAGAATAGTCTAT +
Preference number: 5 (lower is better)
Translates to: QQRASSPSRHLASVPPIFGVLVV*SHRIVY
Trigger: ATAGACTATTCTATGACTCAAGACAACTAGGACACC...AAAGATGGGTGGTACACTTGCCAAGTGCCTAGAGGGGCTAGAGGCTCTCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTCAATTGGTTTTGTTCTaGGAATCCACACTGAATGCC +
Preference number: 5 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAQLVLF*ESTLNA
Trigger: GGCATTCAGTGTGGATTCCAAGAACAAAACCAATTG...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAAAGAGCACGGGTCTGTaGCATGATACACGCTATGTG +
Preference number: 5 (lower is better)
Translates to: WKNLTSCMETQEITWHGKKSTGL*HDTRYV
Trigger: CACATAGCGTGTATCATGCAACAGACCCGTGCTCTT...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGCTGGGCTGTGTAGGTTaGGCCACTCACTATGTTCTG +
Preference number: 5 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMLGCVG*ATHYVL
Trigger: CAGAACATAGTGAGTGGCCAAACCTACACAGCCCAG...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS TCA 90 bp AAGGGTGCTAATGAATGTGCCATGTATTTGAGGATGTCCCTGGGATaGTGCCAAGGTCATAGCTCTGTGGACAACTCCATTCAACTTGGA +
Preference number: 5 (lower is better)
Translates to: KGANECAMYLRMSLG*CQGHSSVDNSIQLG
Trigger: TCCAAGTTGAATGGAGTTGTCCACAGAGCTATGACCTTGGCATCATCCCAGGGACATCCTCAAATACATGGCACATTCATTAGCACCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534945.2
CDS-3UTR CAA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACGGGTAGGCCTTCTGTaGGCAGCAACCGGGATCCTC +
Preference number: 5 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPRVGLL*AATGIL
Trigger: GAGGATCCCGGTTGCTGCCAACAGAAGGCCTACCCG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAATCCAAGAACTTACTATaGCTTCCTGCTGTGGGGACT +
Preference number: 5 (lower is better)
Translates to: WKNLTSCMETQEITWHGKSKNLL*LPAVGT
Trigger: AGTCCCCACAGCAGGAAGCAATAGTAAGTTCTTGGA...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTTTAAATCATCCCCTATaGCTGATCAAACTCACTGCT +
Preference number: 5 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLALNHPL*LIKLTA
Trigger: AGCAGTGAGTTTGATCAGCAATAGGGGATGATTTAA...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTCAATTATTCCTTCTCTaGGGACACATGGAGTATTCT +
Preference number: 5 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAQLFLL*GHMEYS
Trigger: AGAATACTCCATGTGTCCCAAGAGAAGGAATAATTG...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTGGTGTCCTAGTTGTCTaGAGTCATAGAATAGTCTAT +
Preference number: 5 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAGVLVV*SHRIVY
Trigger: ATAGACTATTCTATGACTCAAGACAACTAGGACACC...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TCCCTTCATGTGACCACAGAGTTCACTGTCTGGTGCCTTCTCAAGAGGCTTGCTAAGTTGATAACATTATaGCTTGCTTGGACTGGGAAG +
Preference number: 5 (lower is better)
Translates to: SLHVTTEFTVWCLLKRLAKLITL*LAWTGK
Trigger: CTTCCCAGTCCAAGCAAGCAATAATGTTATCAACTT...AGCAAGCCTCTTGAGAAGGCACCAGACAGTGAACTCTGTGGTCACATGAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATCAATTGGTTTTGTTCTaGGAATCCACACTGAATGCC +
Preference number: 5 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDQLVLF*ESTLNA
Trigger: GGCATTCAGTGTGGATTCCAAGAACAAAACCAATTG...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATAGTTTGGATAGTAAATaGTGTTGGCCACAAAGCACT +
Preference number: 5 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDSLDSK*CWPQST
Trigger: AGTGCTTTGTGGCCAACACAATTTACTATCCAAACT...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATTGTAATCTGCATCTATaGCCTAGGCAATTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDCNLHL*PRQFPF
Trigger: GAAAGGAAATTGCCTAGGCAATAGATGCAGATTACA...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAGTCTCACTTGCTTTTTaGGCCACAGGAAGTACAGAA +
Preference number: 5 (lower is better)
Translates to: WKNLTSCMETQEITWHGKVSLAF*ATGSTE
Trigger: TTCTGTACTTCCTGTGGCCAAAAAAGCAAGTGAGAC...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS TCA 90 bp CGAGGTTCACAGGAAATCATGGAGACCCAGGACCACCTGGTCCTGTaGTTTTTCATAAGAAACTGTAAATCCAGATTTCTGTGCGAACTT +
Preference number: 5 (lower is better)
Translates to: RGSQEIMETQDHLVL*FFIRNCKSRFLCEL
Trigger: AAGTTCGCACAGAAATCTGGATTTACAGTTTCTTATGAAAAATCACAGGACCAGGTGGTCCTGGGTCTCCATGATTTCCTGTGAACCTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534945.2
CDS-3UTR CAA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATGATTTCAATTTCCAGTaGAAGGGAAATTTGTCCATG +
Preference number: 5 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDDFNFQ*KGNLSM
Trigger: CATGGACAAATTTCCCTTCAACTGGAAATTGAAATC...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CAA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAACAGGGTAACCTTCTATaGTCTTTTCTTCTTGCCTTC +
Preference number: 5 (lower is better)
Translates to: WKNLTSCMETQEITWHGKQGNLL*SFLLAF
Trigger: GAAGGCAAGAAGAAAAGACAATAGAAGGTTACCCTG...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp ACACTACCTCCCTCTAAGAGCACGGGTCTGTTGCATGATACACGCTATGTGGATGGAGAAAGACTAGGTTaGGTATTGGGCATTTATTAT +
Preference number: 5 (lower is better)
Translates to: TLPPSKSTGLLHDTRYVDGERLG*VLGIYY
Trigger: ATAATAAATGCCCAATACCAAACCTAGTCTTTCTCC...ATCCACATAGCGTGTATCATGCAACAGACCCGTGCTCTTAGAGGGAGGTAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAATGCACATTTCAATTTaGAGACAACAGCATGCCCTG +
Preference number: 5 (lower is better)
Translates to: WKNLTSCMETQEITWHGKMHISI*RQQHAL
Trigger: CAGGGCATGCTGTTGTCTCAAAATTGAAATGTGCAT...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS TCA 90 bp AATCTAAAAAGCACAAAGCTACTCCATCTTCTACATGATGGCCCTTaGAAGACTTACAAAAAGCTGTCATGTCTCCCTCTCCACCTCACC +
Preference number: 5 (lower is better)
Translates to: NLKSTKLLHLLHDGP*KTYKKLSCLPLHLT
Trigger: GGTGAGGTGGAGAGGGAGACATGACAGCTTTTTGTAAGTCTTTCAAGGGCCATCATGTAGAAGATGGAGTAGCTTTGTGCTTTTTAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534945.2
CDS-3UTR CAA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACAGGCCCGAGTGGATATaGTTCTCCCACTTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNRPEWI*FSHLPS
Trigger: GGAAGGCAAGTGGGAGAACAATATCCACTCGGGCCT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CAA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAAATTCCAAAGTCCACTaGCAAGATCTCATAGAAGGA +
Preference number: 5 (lower is better)
Translates to: WKNLTSCMETQEITWHGKNSKVH*QDLIEG
Trigger: TCCTTCTATGAGATCTTGCAAGTGGACTTTGGAATT...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CAA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGATAAATACAGCTATGTaGGGGCCTTTTTACCCTCAG +
Preference number: 5 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMINTAM*GPFYPQ
Trigger: CTGAGGGTAAAAAGGCCCCAACATAGCTGTATTTAT...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGCACAAATGCACACCCTaGTCAATGTTTTATCTCTGC +
Preference number: 5 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMHKCTP*SMFYLC
Trigger: GCAGAGATAAAACATTGACAAGGGTGTGCATTTGTG...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAAGACTAGGTTTGGTATaGGGCATTTATTATGACACG +
Preference number: 5 (lower is better)
Translates to: WKNLTSCMETQEITWHGKRLGLV*GIYYDT
Trigger: CGTGTCATAATAAATGCCCAATACCAAACCTAGTCT...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGATGGAGGTTGGACAATaGGTTTTGTTCTTGGAATCC +
Preference number: 5 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMMEVGQ*VLFLES
Trigger: GGATTCCAAGAACAAAACCAATTGTCCAACCTCCAT...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGATGGAATCACAGTTGTaGGAAACACTCAAAGTGGAG +
Preference number: 5 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMMESQL*ETLKVE
Trigger: CTCCACTTTGAGTGTTTCCAACAACTGTGATTCCAT...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613307.1
CDS TCA 90 bp ATAGGCTTAACACTCACACTTCCTTCAATCATTTCTCCTGTGATTTaGTTTCAAGAGTCCTCAGCCTCTCAGACACTTTTTGGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: IGLTLTLPSIISPVI*FQESSASQTLFGRA
Trigger: TGCTCTGCCAAAAAGTGTCTGAGAGGCTGAGGACTCTTGAAATCAAATCACAGGAGAAATGATTGAAGGAAGTGTGAGTGTTAAGCCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534945.2
CDS-3UTR CAA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAATTGGCCACAAAGCACTaGTATAAATACAGCTATGTT +
Preference number: 5 (lower is better)
Translates to: WKNLTSCMETQEITWHGKLATKH*YKYSYV
Trigger: AACATAGCTGTATTTATACAAGTGCTTTGTGGCCAA...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TGGAAAAACCTGACATCCTGCATGGAGACCCAGGAAATAACATGGCATGGCAAAGGAGAAAGACTAGGTTaGGTATTGGGCATTTATTAT +
Preference number: 5 (lower is better)
Translates to: WKNLTSCMETQEITWHGKGERLG*VLGIYY
Trigger: ATAATAAATGCCCAATACCAAACCTAGTCTTTCTCC...TTTGCCATGCCATGTTATTTCCTGGGTCTCCATGCAGGATGTCAGGTTTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS TCA 90 bp CCATTCTTGGAATCTAAAAAGCACAAAGCTACTCCATCTTCTACATaGTGGCCCTTGAAAGACTTACAAAAAGCTGTCATGTCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: PFLESKKHKATPSST*WPLKDLQKAVMSPS
Trigger: AGAGGGAGACATGACAGCTTTTTGTAAGTCTTTCAAGGGCCATCATGTAGAAGATGGAGTAGCTTTGTGCTTTTTAGATTCCAAGAATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534945.2
CDS-3UTR CAA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAACCACAATTGGCCATTaGGACTCAAGGTTTGCCTGG +
Preference number: 5 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPTTIGH*DSRFAW
Trigger: CCAGGCAAACCTTGAGTCCAAATGGCCAATTGTGGT...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp TCAGTATTCACACACACACACACACACACACACACACACACGGGTATATGTATGCCTAATAGTTGTATATaGACTAGCTGGAAAACAAGG +
Preference number: 5 (lower is better)
Translates to: SVFTHTHTHTHTHTGICMPNSCI*TSWKTR
Trigger: CCTTGTTTTCCAGCTAGTCAATATACAACTATTAGG...CATACATATACCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACAATGCCAGACAAAACTaGTCCCCACTGTTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNNARQN*SPLFAA
Trigger: GGCAGCAAACAGTGGGGACAAGTTTTGTCTGGCATT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS GCA 90 bp GCAACATCACATGTCTGGAAGCTCAACCAAAGAACTCACTACCTCTaGAGTCTTTTTCTTTATATTGAGCTAAAACTGGTACCTTTCAAC +
Preference number: 5 (lower is better)
Translates to: ATSHVWKLNQRTHYL*SLFLYIELKLVPFN
Trigger: GTTGAAAGGTACCAGTTTTAGCTCAATATAAAGAAAAAGACTGCAGAGGTAGTGAGTTCTTTGGTTGAGCTTCCAGACATGTGATGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534945.2
CDS-3UTR CAA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCAGGGAAAGCAAACATCTaGACACAGGGTAGATCTTCC +
Preference number: 5 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPGKANI*TQGRSS
Trigger: GGAAGATCTACCCTGTGTCAAGATGTTTGCTTTCCC...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CAA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACTCCAAGAACTTACTATaGCTTCCTGCTGTGGGGACT +
Preference number: 5 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNSKNLL*LPAVGT
Trigger: AGTCCCCACAGCAGGAAGCAATAGTAAGTTCTTGGA...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACAATGCCTGGCTCTCCTaGCTTCCTTATCCCATCAAA +
Preference number: 5 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNNAWLS*LPYPIK
Trigger: TTTGATGGGATAAGGAAGCAAGGAGAGCCAGGCATT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACGGATCTACACCTTTCTaGACTGTGAGTCCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNGSTPF*TVSPFQ
Trigger: CTGGAAAGGACTCACAGTCAAGAAAGGTGTAGATCC...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613307.1
CDS-3UTR CAA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACGTTCCTTGTGAGGTCTaGGTTGGCTTCTTTAAGGAA +
Preference number: 5 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNVPCEV*VGFFKE
Trigger: TTCCTTAAAGAAGCCAACCAAGACCTCACAAGGAAC...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS-3UTR CAA 90 bp TACAGAGACATTAAATATACGGTGGAACATACACAACAGATCATACTGAAACCACCCAGTGACTCTAAGTaGTCACAAGAAGCATCTTCA +
Preference number: 5 (lower is better)
Translates to: YRDIKYTVEHTQQIILKPPSDSK*SQEASS
Trigger: TGAAGATGCTTCTTGTGACAACTTAGAGTCACTGGG...TGGTTTCAGTATGATCTGTTGTGTATGTTCCACCGTATATTTAATGTCTCTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS TCA 90 bp ATTAAGTCAAGAACTCTCACCTTTTCACTTAAAAGAAGCACTTTATaGCTTCTTGTTGGTCTAGCCGAATTGCCAGCATCACTACTCTTA +
Preference number: 5 (lower is better)
Translates to: IKSRTLTFSLKRSTL*LLVGLAELPASLLL
Trigger: TAAGAGTAGTGATGCTGGCAATTCGGCTAGACCAACAAGAAGTCATAAAGTGCTTCTTTTAAGTGAAAAGGTGAGAGTTCTTGACTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534945.2
CDS TCA 90 bp GATAGACGATTCGCTCTGACTGTAGATCTTAGTAACTCCAGCATATaGTCTTTTTCCTTCCTTATTAAGTCAAGAACTCTCACCTTTTCA +
Preference number: 5 (lower is better)
Translates to: DRRFALTVDLSNSSI*SFSFLIKSRTLTFS
Trigger: TGAAAAGGTGAGAGTTCTTGACTTAATAAGGAAGGAAAAAGATCATATGCTGGAGTTACTAAGATCTACAGTCAGAGCGAATCGTCTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534945.2
CDS-3UTR CAA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACCAAACTGAACTACTTTaGGAACTTCATCAGCTTCGG +
Preference number: 5 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNQTELL*ELHQLR
Trigger: CCGAAGCTGATGAAGTTCCAAAAGTAGTTCAGTTTG...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACTTAAATCATCCCCTATaGCTGATCAAACTCACTGCT +
Preference number: 5 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNLNHPL*LIKLTA
Trigger: AGCAGTGAGTTTGATCAGCAATAGGGGATGATTTAA...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACAGACTAGGTTTGGTATaGGGCATTTATTATGACACG +
Preference number: 5 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNRLGLV*GIYYDT
Trigger: CGTGTCATAATAAATGCCCAATACCAAACCTAGTCT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACATCATATGGTCAGTGTaGACACTGGCATTCTGTTAT +
Preference number: 5 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNIIWSV*TLAFCY
Trigger: ATAACAGAATGCCAGTGTCAACACTGACCATATGAT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299308.7
ENST00000613307.1
CDS-3UTR CAA 90 bp GTTTTCAAAATGTTTGGAAGTGCCTTTACAGAGACATTAAATATACGGTGGAACATGGAATCACAGTTGTaGGAAACCTTAATGACATCT +
Preference number: 5 (lower is better)
Translates to: VFKMFGSAFTETLNIRWNMESQL*ETLMTS
Trigger: AGATGTCATTAAGGTTTCCAACAACTGTGATTCCAT...GTTCCACCGTATATTTAATGTCTCTGTAAAGGCACTTCCAAACATTTTGAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299308.7
CDS GCA 72 bp GGCTCGCTCCCAGCGCGCCGCTCCTCCCCAGACGCATaGGCCGGCGCTGGCGGCGCTTCCTCGGCTGCGCCT +
Preference number: 6 (lower is better)
Translates to: GSLPARRSSPDA*AGAGGASSAAP
Trigger: AGGCGCAGCCGAGGAAGCGCCGCCAGCGCCGGCGCATGCGTCTGGGGAGGAGCGGCGCGCTGGGAGCGAGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682704.1
CDS CCA 72 bp GCGGCGCTTCCTCGGCTGCGCCTCTGCGCGCTCTCCTaGGCTCGGCCGTGCGTGGCTGGGGAGCTGGGGCGG +
Preference number: 6 (lower is better)
Translates to: AALPRLRLCALS*ARPCVAGELGR
Trigger: CCGCCCCAGCTCCCCAGCCACGCACGGCCGAGCCCAGGAGAGCGCGCAGAGGCGCAGCCGAGGAAGCGCCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682704.1
CDS CCA 72 bp AGCGCGCCGCTCCTCCCCAGACGCATGCGCCGGCGCTaGCGGCGCTTCCTCGGCTGCGCCTCTGCGCGCTCT +
Preference number: 6 (lower is better)
Translates to: SAPLLPRRMRRR*RRFLGCASARS
Trigger: AGAGCGCGCAGAGGCGCAGCCGAGGAAGCGCCGCCAGCGCCGGCGCATGCGTCTGGGGAGGAGCGGCGCGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682704.1
CDS TCA 72 bp GAGGACACTGGCCAGCCTTGTCAGCTGGGTAGAGCGTaGAGAAGAGCTCCATCGTGGTGCCCCCGAGCAGGG +
Preference number: 6 (lower is better)
Translates to: EDTGQPCQLGRA*RRAPSWCPRAG
Trigger: CCCTGCTCGGGGGCACCACGATGGAGCTCTTCTTCACGCTCTACCCAGCTGACAAGGCTGGCCAGTGTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS TCA 72 bp CCCTGCTCTGCGTGTCCGGGCGATGGCCCATGCAGGTaGGGGTGGCCGACGTCTGAGTGCTGCCATTATCAA +
Preference number: 6 (lower is better)
Translates to: PCSACPGDGPCR*GWPTSECCHYQ
Trigger: TTGATAATGGCAGCACTCAGACGTCGGCCACCCTCACCTGCATGGGCCATCGCCCGGACACGCAGAGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS CCA 72 bp TGGGTAGACCACCACACTCCCAATCCTCTCTCGGGCTaGAAACGCTTGCTGGGGGCTCTCCAGGCCCGAGTG +
Preference number: 6 (lower is better)
Translates to: WVDHHTPNPLSG*KRLLGALQARV
Trigger: CACTCGGGCCTGGAGAGCCCCCAGCAAGCGTTTCCAGCCCGAGAGAGGATTGGGAGTGTGGTGGTCTACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS CAA 90 bp CGGGCTGGAAACGCTTGCTGGGGGCTCTCCAGGCCCGAGTGGATATaGTTCTCCCACTTGCCTTCCTCCTCCAGAGGACACTGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: RAGNACWGLSRPEWI*FSHLPSSSRGHWPA
Trigger: GGCTGGCCAGTGTCCTCTGGAGGAGGAAGGCAAGTGGGAGAACAATATCCACTCGGGCCTGGAGAGCCCCCAGCAAGCGTTTCCAGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS GCA 72 bp ACACAGCCCTGGGGCCCCTTGCAGCCGACAGCTGGCTaGCACTTCCCTGGCCTCAGGGAAAGCAAACATCTT +
Preference number: 6 (lower is better)
Translates to: TQPWGPLQPTAG*HFPGLRESKHL
Trigger: AAGATGTTTGCTTTCCCTGAGGCCAGGGAAGTGGCAGCCAGCTGTCGGCTGCAAGGGGCCCCAGGGCTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS TCA 72 bp GGGCGATGGCCCATGCAGGTGAGGGTGGCCGACGTCTaGGTGCTGCCATTATCAATTTCCTCCTGGACTGCC +
Preference number: 6 (lower is better)
Translates to: GRWPMQVRVADV*VLPLSISSWTA
Trigger: GGCAGTCCAGGAGGAAATTGATAATGGCAGCACTCAGACGTCGGCCACCCTCACCTGCATGGGCCATCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS GCA 72 bp ACCACACTCCCAATCCTCTCTCGGGCTGGAAACGCTTaGTGGGGGCTCTCCAGGCCCGAGTGGATATTGTTC +
Preference number: 6 (lower is better)
Translates to: TTLPILSRAGNA*WGLSRPEWILF
Trigger: GAACAATATCCACTCGGGCCTGGAGAGCCCCCAGCAAGCGTTTCCAGCCCGAGAGAGGATTGGGAGTGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS CCA 72 bp TTCCTCCTCCAGAGGACACTGGCCAGCCTTGTCAGCTaGGTAGAGCGTGAAGAAGAGCTCCATCGTGGTGCC +
Preference number: 6 (lower is better)
Translates to: FLLQRTLASLVS*VEREEELHRGA
Trigger: GGCACCACGATGGAGCTCTTCTTCACGCTCTACCCAGCTGACAAGGCTGGCCAGTGTCCTCTGGAGGAGGAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS CCA 72 bp GCTGGAAACGCTTGCTGGGGGCTCTCCAGGCCCGAGTaGATATTGTTCTCCCACTTGCCTTCCTCCTCCAGA +
Preference number: 6 (lower is better)
Translates to: AGNACWGLSRPE*ILFSHLPSSSR
Trigger: TCTGGAGGAGGAAGGCAAGTGGGAGAACAATATCCACTCGGGCCTGGAGAGCCCCCAGCAAGCGTTTCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS CCA 72 bp ACACTCCCAATCCTCTCTCGGGCTGGAAACGCTTGCTaGGGGCTCTCCAGGCCCGAGTGGATATTGTTCTCC +
Preference number: 6 (lower is better)
Translates to: TLPILSRAGNAC*GLSRPEWILFS
Trigger: GGAGAACAATATCCACTCGGGCCTGGAGAGCCCCCAGCAAGCGTTTCCAGCCCGAGAGAGGATTGGGAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS CAA 72 bp AACGCTTGCTGGGGGCTCTCCAGGCCCGAGTGGATATaGTTCTCCCACTTGCCTTCCTCCTCCAGAGGACAC +
Preference number: 6 (lower is better)
Translates to: NACWGLSRPEWI*FSHLPSSSRGH
Trigger: GTGTCCTCTGGAGGAGGAAGGCAAGTGGGAGAACAATATCCACTCGGGCCTGGAGAGCCCCCAGCAAGCGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS CAA 90 bp GACCACATTCTCGTCCAAGCTCACCAGGGACCACTTCAGATCATCTaGGGTTGGGTAGACCACCACACTCCCAATCCTCTCTCGGGCTGG +
Preference number: 6 (lower is better)
Translates to: DHILVQAHQGPLQII*GWVDHHTPNPLSGW
Trigger: CCAGCCCGAGAGAGGATTGGGAGTGTGGTGGTCTACCCAACCCAAGATGATCTGAAGTGGTCCCTGGTGAGCTTGGACGAGAATGTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS CCA 72 bp CAAGCTCACCAGGGACCACTTCAGATCATCTTGGGTTaGGTAGACCACCACACTCCCAATCCTCTCTCGGGC +
Preference number: 6 (lower is better)
Translates to: QAHQGPLQIILG*VDHHTPNPLSG
Trigger: GCCCGAGAGAGGATTGGGAGTGTGGTGGTCTACCCAACCCAAGATGATCTGAAGTGGTCCCTGGTGAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS CAA 72 bp CCAAGCTCACCAGGGACCACTTCAGATCATCTTGGGTaGGGTAGACCACCACACTCCCAATCCTCTCTCGGG +
Preference number: 6 (lower is better)
Translates to: PSSPGTTSDHLG*GRPPHSQSSLG
Trigger: CCCGAGAGAGGATTGGGAGTGTGGTGGTCTACCCAACCCAAGATGATCTGAAGTGGTCCCTGGTGAGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS CAA 90 bp CATTCTCGTCCAAGCTCACCAGGGACCACTTCAGATCATCTTGGGTaGGGTAGACCACCACACTCCCAATCCTCTCTCGGGCTGGAAACG +
Preference number: 6 (lower is better)
Translates to: HSRPSSPGTTSDHLG*GRPPHSQSSLGLET
Trigger: CGTTTCCAGCCCGAGAGAGGATTGGGAGTGTGGTGGTCTACCCAACCCAAGATGATCTGAAGTGGTCCCTGGTGAGCTTGGACGAGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS TCA 72 bp TGTCCCCTTCCCGGACTAGATTCAGAGGTACCGAGATaGCCACATTCTCGTCCAAGCTCACCAGGGACCACT +
Preference number: 6 (lower is better)
Translates to: CPLPGLDSEVPR*PHSRPSSPGTT
Trigger: AGTGGTCCCTGGTGAGCTTGGACGAGAATGTGGTCATCTCGGTACCTCTGAATCTAGTCCGGGAAGGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS TCA 72 bp AACACAGTCAGGCTGAGCAAGTCACCGAGGAAGGCTTaGTGTGAAAGCATGGCCTCCACGCAGTCTGCAGGA +
Preference number: 6 (lower is better)
Translates to: NTVRLSKSPRKA*CESMASTQSAG
Trigger: TCCTGCAGACTGCGTGGAGGCCATGCTTTCACATCAAGCCTTCCTCGGTGACTTGCTCAGCCTGACTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535886.2
ENST00000613307.1
CDS GCA 72 bp GGTGCCCAGACAGTGACCTCGAACTGGGAGGTGAAGTaGTGGTGGGTGAAGTTCACAATCGTGTCCACTTTG +
Preference number: 6 (lower is better)
Translates to: GAQTVTSNWEVK*WWVKFTIVSTL
Trigger: CAAAGTGGACACGATTGTGAACTTCACCCACCAGCACTTCACCTCCCAGTTCGAGGTCACTGTCTGGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299308.7
ENST00000535886.2
ENST00000613307.1
ENST00000682704.1
CDS CCA 72 bp CTGCCACAGAGCTACTGGTCAGAGAGACCAAAAAGGTaGCCGTGTCCCCTTCCCGGACTAGATTCAGAGGTA +
Preference number: 6 (lower is better)
Translates to: LPQSYWSERPKR*PCPLPGLDSEV
Trigger: TACCTCTGAATCTAGTCCGGGAAGGGGACACGGCCACCTTTTTGGTCTCTCTGACCAGTAGCTCTGTGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS CCA 72 bp GCCCAGACAGTGACCTCGAACTGGGAGGTGAAGTGCTaGTGGGTGAAGTTCACAATCGTGTCCACTTTGCTC +
Preference number: 6 (lower is better)
Translates to: AQTVTSNWEVKC*WVKFTIVSTLL
Trigger: GAGCAAAGTGGACACGATTGTGAACTTCACCCACCAGCACTTCACCTCCCAGTTCGAGGTCACTGTCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299308.7
ENST00000535886.2
ENST00000613307.1
ENST00000682704.1
CDS CAA 72 bp CTCGTCCAAGCTCACCAGGGACCACTTCAGATCATCTaGGGTTGGGTAGACCACCACACTCCCAATCCTCTC +
Preference number: 6 (lower is better)
Translates to: LVQAHQGPLQII*GWVDHHTPNPL
Trigger: GAGAGGATTGGGAGTGTGGTGGTCTACCCAACCCAAGATGATCTGAAGTGGTCCCTGGTGAGCTTGGACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS GCA 72 bp CTGGACTGCCCATTGGTCCTCACTGCTGACTCTCACTaGCGTTATCTTCACACCTGCTGCCGCCTTAATTCT +
Preference number: 6 (lower is better)
Translates to: LDCPLVLTADSH*RYLHTCCRLNS
Trigger: AGAATTAAGGCGGCAGCAGGTGTGAAGATAACGGCAGTGAGAGTCAGCAGTGAGGACCAATGGGCAGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS GCA 72 bp CGTCTGAGTGCTGCCATTATCAATTTCCTCCTGGACTaGCCATTGGTCCTCACTGCTGACTCTCACTGCCGT +
Preference number: 6 (lower is better)
Translates to: RLSAAIINFLLD*PLVLTADSHCR
Trigger: ACGGCAGTGAGAGTCAGCAGTGAGGACCAATGGGCAGTCCAGGAGGAAATTGATAATGGCAGCACTCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS GCA 72 bp GAGTCCTCAATCGGGTACTCCACCTGCCAGGTAATCTaGTGGGCCCCAGCCAGGTCACTGCTATTATCAATT +
Preference number: 6 (lower is better)
Translates to: ESSIGYSTCQVI*WAPARSLLLSI
Trigger: AATTGATAATAGCAGTGACCTGGCTGGGGCCCAGCAGATTACCTGGCAGGTGGAGTACCCGATTGAGGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS GCA 72 bp GTGGAGACTACAGTGAGCTGGAGGGCACAGGTTTTATaGAGAGGAGCATCCTCTCTTCAACTCCAGACGAGG +
Preference number: 6 (lower is better)
Translates to: VETTVSWRAQVL*RGASSLQLQTR
Trigger: CCTCGTCTGGAGTTGAAGAGAGGATGCTCCTCTGCATAAAACCTGTGCCCTCCAGCTCACTGTAGTCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534945.2
CDS CCA 72 bp TCCTCAATCGGGTACTCCACCTGCCAGGTAATCTGCTaGGCCCCAGCCAGGTCACTGCTATTATCAATTCCA +
Preference number: 6 (lower is better)
Translates to: SSIGYSTCQVIC*APARSLLLSIP
Trigger: TGGAATTGATAATAGCAGTGACCTGGCTGGGGCCCAGCAGATTACCTGGCAGGTGGAGTACCCGATTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS CAA 90 bp CGACGTCTGAGTGCTGCCATTATCAATTTCCTCCTGGACTGCCCATaGGTCCTCACTGCTGACTCTCACTGCCGTTATCTTCACACCTGC +
Preference number: 6 (lower is better)
Translates to: RRLSAAIINFLLDCP*VLTADSHCRYLHTC
Trigger: GCAGGTGTGAAGATAACGGCAGTGAGAGTCAGCAGTGAGGACCAATGGGCAGTCCAGGAGGAAATTGATAATGGCAGCACTCAGACGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS CCA 72 bp CAGACAGTGACCTCGAACTGGGAGGTGAAGTGCTGGTaGGTGAAGTTCACAATCGTGTCCACTTTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: QTVTSNWEVKCW*VKFTIVSTLLF
Trigger: GAAGAGCAAAGTGGACACGATTGTGAACTTCACCCACCAGCACTTCACCTCCCAGTTCGAGGTCACTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299308.7
ENST00000535886.2
ENST00000613307.1
ENST00000682704.1
CDS CAA 72 bp GCTGCCACTTCCCTGGCCTCAGGGAAAGCAAACATCTaGACACAGGGTAGATCTTCCGTAAGGTCACTGTCA +
Preference number: 6 (lower is better)
Translates to: AATSLASGKANI*TQGRSSVRSLS
Trigger: TGACAGTGACCTTACGGAAGATCTACCCTGTGTCAAGATGTTTGCTTTCCCTGAGGCCAGGGAAGTGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS CAA 90 bp TGTGAAAGCATGGCCTCCACGCAGTCTGCAGGATCTACACCTTTCTaGACTGTGAGTCCTTTCCAGCACAGGAAAGGTTGGTTGGAAACC +
Preference number: 6 (lower is better)
Translates to: CESMASTQSAGSTPF*TVSPFQHRKGWLET
Trigger: GGTTTCCAACCAACCTTTCCTGTGCTGGAAAGGACTCACAGTCAAGAAAGGTGTAGATCCTGCAGACTGCGTGGAGGCCATGCTTTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613307.1
CDS GCA 72 bp ACTGCTGACTCTCACTGCCGTTATCTTCACACCTGCTaGCGCCTTAATTCTAAGAGTGAACTGGTCTGCCAC +
Preference number: 6 (lower is better)
Translates to: TADSHCRYLHTC*RLNSKSELVCH
Trigger: GTGGCAGACCAGTTCACTCTTAGAATTAAGGCGGCAGCAGGTGTGAAGATAACGGCAGTGAGAGTCAGCAGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS GCA 72 bp CTCACTGCTGACTCTCACTGCCGTTATCTTCACACCTaGTGCCGCCTTAATTCTAAGAGTGAACTGGTCTGC +
Preference number: 6 (lower is better)
Translates to: LTADSHCRYLHT*CRLNSKSELVC
Trigger: GCAGACCAGTTCACTCTTAGAATTAAGGCGGCAGCAGGTGTGAAGATAACGGCAGTGAGAGTCAGCAGTGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS CCA 72 bp AAAAGGACTCCTCTGCATTGGAGATGTGCAAGTTCGTaGGGAGGTAAGCAGGGAGCGAGGAAAACTTCTGCA +
Preference number: 6 (lower is better)
Translates to: KRTPLHWRCASS*GGKQGARKTSA
Trigger: TGCAGAAGTTTTCCTCGCTCCCTGCTTACCTCCCCACGAACTTGCACATCTCCAATGCAGAGGAGTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000535330.1
ENST00000682704.1
CDS CCA 72 bp GTGCTGCCATTATCAATTTCCTCCTGGACTGCCCATTaGTCCTCACTGCTGACTCTCACTGCCGTTATCTTC +
Preference number: 6 (lower is better)
Translates to: VLPLSISSWTAH*SSLLTLTAVIF
Trigger: GAAGATAACGGCAGTGAGAGTCAGCAGTGAGGACCAATGGGCAGTCCAGGAGGAAATTGATAATGGCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS CAA 90 bp CTGGGCCCCAGCCAGGTCACTGCTATTATCAATTCCAAAGTCCACTaGCAAGATCTCATAGAAGGATCCATTTACCCTGCTCTGCGTGTC +
Preference number: 6 (lower is better)
Translates to: LGPSQVTAIINSKVH*QDLIEGSIYPALRV
Trigger: GACACGCAGAGCAGGGTAAATGGATCCTTCTATGAGATCTTGCAAGTGGACTTTGGAATTGATAATAGCAGTGACCTGGCTGGGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS TCA 72 bp GATGCTGCACCAAACATTTCCCGTAGAGTCTGGAGCTaGGGCGAGGGCACCAAATCTTCAGCTTTATTCAAC +
Preference number: 6 (lower is better)
Translates to: DAAPNISRRVWS*GEGTKSSALFN
Trigger: GTTGAATAAAGCTGAAGATTTGGTGCCCTCGCCTCAGCTCCAGACTCTACGGGAAATGTTTGGTGCAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535330.1
CDS GCA 72 bp ACCTGCTGCCGCCTTAATTCTAAGAGTGAACTGGTCTaGCACAGAGCTACTGGTCAGAGAGACCAAAAAGGT +
Preference number: 6 (lower is better)
Translates to: TCCRLNSKSELV*HRATGQRDQKG
Trigger: ACCTTTTTGGTCTCTCTGACCAGTAGCTCTGTGGCAGACCAGTTCACTCTTAGAATTAAGGCGGCAGCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS CCA 72 bp CTCTCTTCAACTCCAGACGAGGTTCACAGGAAATCATaGAGACCCAGGACCACCTGGTCCTGTGATTTTTCA +
Preference number: 6 (lower is better)
Translates to: LSSTPDEVHRKS*RPRTTWSCDFS
Trigger: TGAAAAATCACAGGACCAGGTGGTCCTGGGTCTCCATGATTTCCTGTGAACCTCGTCTGGAGTTGAAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534945.2
CDS CAA 72 bp AGTGCTGCCATTATCAATTTCCTCCTGGACTGCCCATaGGTCCTCACTGCTGACTCTCACTGCCGTTATCTT +
Preference number: 6 (lower is better)
Translates to: SAAIINFLLDCP*VLTADSHCRYL
Trigger: AAGATAACGGCAGTGAGAGTCAGCAGTGAGGACCAATGGGCAGTCCAGGAGGAAATTGATAATGGCAGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS TCA 72 bp GTGGTATCTACAGCATGGATATGCCAGACAAAGTCATaGGTTACAACCCAGGTGGGATGGAGCAGGAAGACT +
Preference number: 6 (lower is better)
Translates to: VVSTAWICQTKS*VTTQVGWSRKT
Trigger: AGTCTTCCTGCTCCATCCCACCTGGGTTGTAACTCATGACTTTGTCTGGCATATCCATGCTGTAGATACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534945.2
CDS TCA 72 bp TCTCTCCAAAGGGTGCTAATGAATGTGCCATGTATTTaGGGATGTCCCTGGGATGATGCCAAGGTCATAGCT +
Preference number: 6 (lower is better)
Translates to: SLQRVLMNVPCI*GCPWDDAKVIA
Trigger: AGCTATGACCTTGGCATCATCCCAGGGACATCCTCAAATACATGGCACATTCATTAGCACCCTTTGGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534945.2
CDS TCA 72 bp AATGAATGTGCCATGTATTTGAGGATGTCCCTGGGATaGTGCCAAGGTCATAGCTCTGTGGACAACTCCATT +
Preference number: 6 (lower is better)
Translates to: NECAMYLRMSLG*CQGHSSVDNSI
Trigger: AATGGAGTTGTCCACAGAGCTATGACCTTGGCATCATCCCAGGGACATCCTCAAATACATGGCACATTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534945.2
CDS TCA 72 bp AGCACAAAGCTACTCCATCTTCTACATGATGGCCCTTaGAAGACTTACAAAAAGCTGTCATGTCTCCCTCTC +
Preference number: 6 (lower is better)
Translates to: STKLLHLLHDGP*KTYKKLSCLPL
Trigger: GAGAGGGAGACATGACAGCTTTTTGTAAGTCTTTCAAGGGCCATCATGTAGAAGATGGAGTAGCTTTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534945.2
CDS GCA 72 bp CTTAAAAAGTGTGAATACAGCTCTGAGCTTGCGATCTaGAGGTTTCACTTTGTTCCTCTGAAGACTGGGCAA +
Preference number: 6 (lower is better)
Translates to: LKKCEYSSELAI*RFHFVPLKTGQ
Trigger: TTGCCCAGTCTTCAGAGGAACAAAGTGAAACCTGCAGATCGCAAGCTCAGAGCTGTATTCACACTTTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534945.2
CDS CCA 72 bp AAAACAAGGTCTGCACTTTGGGTCTGTTGGAGTAGATaGAGCTGTCAAGGATGTGGGATTTCAATTTCCAGT +
Preference number: 6 (lower is better)
Translates to: KTRSALWVCWSR*SCQGCGISISS
Trigger: ACTGGAAATTGAAATCCCACATCCTTGACAGCTCCATCTACTCCAACAGACCCAAAGTGCAGACCTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS GCA 72 bp TCATGGTTCCAAGGCACAAAGATCTTTGGTGAGCCCTaGAAGACTCTCCCTAAAAATCATTCAGTGTTTTCT +
Preference number: 6 (lower is better)
Translates to: SWFQGTKIFGEP*KTLPKNHSVFS
Trigger: AGAAAACACTGAATGATTTTTAGGGAGAGTCTTGCAGGGCTCACCAAAGATCTTTGTGCCTTGGAACCATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534945.2
CDS CAA 72 bp AGCCAGGTCACTGCTATTATCAATTCCAAAGTCCACTaGCAAGATCTCATAGAAGGATCCATTTACCCTGCT +
Preference number: 6 (lower is better)
Translates to: SQVTAIINSKVH*QDLIEGSIYPA
Trigger: AGCAGGGTAAATGGATCCTTCTATGAGATCTTGCAAGTGGACTTTGGAATTGATAATAGCAGTGACCTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299308.7
ENST00000534945.2
ENST00000682704.1
CDS CCA 72 bp TCAACCTGTAGCAGCCTTATCAAACAGTTGACTCACTaGATCCCAATACTGATAAAAACGCTAAGGCTTCTT +
Preference number: 6 (lower is better)
Translates to: STCSSLIKQLTH*IPILIKTLRLL
Trigger: AAGAAGCCTTAGCGTTTTTATCAGTATTGGGATCCAGTGAGTCAACTGTTTGATAAGGCTGCTACAGGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534945.2
CDS CAA 72 bp AGTGAGACTGGGGATTTTCAAGGATTAGGGAGTAGTTaGGTTATTGTTAGTTCTGCCGTTTGCTGTGACTTT +
Preference number: 6 (lower is better)
Translates to: SETGDFQGLGSS*VIVSSAVCCDF
Trigger: AAAGTCACAGCAAACGGCAGAACTAACAATAACCAAACTACTCCCTAATCCTTGAAAATCCCCAGTCTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534945.2
CDS TCA 72 bp AGAACTCTCACCTTTTCACTTAAAAGAAGCACTTTATaGCTTCTTGTTGGTCTAGCCGAATTGCCAGCATCA +
Preference number: 6 (lower is better)
Translates to: RTLTFSLKRSTL*LLVGLAELPAS
Trigger: TGATGCTGGCAATTCGGCTAGACCAACAAGAAGTCATAAAGTGCTTCTTTTAAGTGAAAAGGTGAGAGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534945.2
CDS CAA 72 bp AACACTCACACTTCCTTCAATCATTTCTCCTGTGATTaGATTTCAAGAGTCCTCAGCCTCTCAGACACTTTT +
Preference number: 6 (lower is better)
Translates to: NTHTSFNHFSCD*ISRVLSLSDTF
Trigger: AAAAGTGTCTGAGAGGCTGAGGACTCTTGAAATCAAATCACAGGAGAAATGATTGAAGGAAGTGTGAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534945.2
CDS TCA 72 bp GAATCTAAAAAGCACAAAGCTACTCCATCTTCTACATaGTGGCCCTTGAAAGACTTACAAAAAGCTGTCATG +
Preference number: 6 (lower is better)
Translates to: ESKKHKATPSST*WPLKDLQKAVM
Trigger: CATGACAGCTTTTTGTAAGTCTTTCAAGGGCCATCATGTAGAAGATGGAGTAGCTTTGTGCTTTTTAGATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534945.2