RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM130 (Homo sapiens)

Ensembl gene IDs: ENSG00000166448

Ensembl transcript IDs: ENST00000339375.9, ENST00000345589.4, ENST00000416379.6, ENST00000445790.1, ENST00000450876.5, ENST00000461092.1, ENST00000486839.5

Found 452 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGTCTGGGGGAGGAAACTGAGAACCCCCAATGGACAGCAGATGTaGCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCACCTGG +
Preference number: 1 (lower is better)
Translates to: AVWGRKLRTPNGQQM*QYERNGQWAARPTW
Trigger: CCAGGTGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCATTGGGGGTTCTCAGTTTCCTCCCCCAGACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR GCA 90 bp GCCAGCCAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTaGAGAGACAAAGCACAAAGGGAGGGCCCGGGCCCAGAACCTGTC +
Preference number: 1 (lower is better)
Translates to: ASQQGLGWPYKGRKN*RDKAQREGPGPEPV
Trigger: GACAGGTTCTGGGCCCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTGGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR CCA 90 bp GGATGGATGATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTaGTCAGTGGTGCACACCACCCTGCTGGAAACTCCAAGTCAGCAG +
Preference number: 1 (lower is better)
Translates to: GWMIQANSPTQMNPS*SVVHTTLLETPSQQ
Trigger: CTGCTGACTTGGAGTTTCCAGCAGGGTGGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGATCATCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR CCA 90 bp ATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCACCTaGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGAA +
Preference number: 1 (lower is better)
Translates to: MCQYERNGQWAARPT*ESTRNTPSIKVLHE
Trigger: TTCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR TCA 90 bp CTTTCTAGCTCTCTGGCACAGGTAGGGCTGTCTGGGGGAGGAAACTaGGAACCCCCAATGGACAGCAGATGTGCCAATATGAGAGGAATG +
Preference number: 1 (lower is better)
Translates to: LSSSLAQVGLSGGGN*EPPMDSRCANMRGM
Trigger: CATTCCTCTCATATTGGCACATCTGCTGTCCATTGGGGGTTCTCAGTTTCCTCCCCCAGACAGCCCTACCTGTGCCAGAGAGCTAGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR GCA 90 bp CAGGGCTGCTTGGAGGTCAAATTTCCTTTCAGCTCTAGTGCAGGGTaGATCCCAGCAACCGACTTAACCAGATACAGAGCTGATCATCTG +
Preference number: 1 (lower is better)
Translates to: QGCLEVKFPFSSSAG*IPATDLTRYRADHL
Trigger: CAGATGATCAGCTCTGTATCTGGTTAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCTGAAAGGAAATTTGACCTCCAAGCAGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR GCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCCCCCATCCAGCCCCCTaGCAGCCAGCAGGGACTAGG +
Preference number: 2 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPPHPAP*QPAGTR
Trigger: CCTAGTCCCTGCTGGCTGGCAGGGGGCTGGATGGGG...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
67% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR GCA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCCCCCATCCAGCCCCCTaGCAGCCAGCAGGGACTAGG +
Preference number: 2 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLPHPAP*QPAGTR
Trigger: CCTAGTCCCTGCTGGCTGGCAGGGGGCTGGATGGGG...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCGCAGCCAGGCCCACCTaGGAGTCAACACGGAACACC +
Preference number: 2 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPAARPT*ESTRNT
Trigger: GGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGC...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCACCCCTCCTGGTCAGTaGTGCACACCACCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSTPPGQ*CTPPCW
Trigger: CCAGCAGGGTGGTGTGCACCACTGACCAGGAGGGGT...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR GCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCCCTCCTGGTCAGTGGTaGACACCACCCTGCTGGAAA +
Preference number: 2 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPPPGQW*TPPCWK
Trigger: TTTCCAGCAGGGTGGTGTGCACCACTGACCAGGAGG...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR GCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCTTCGCACCATTCTCCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 2 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPFAPFS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGGAGAATGGTGCGAA...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR GCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCGCTGGCAGGCAAGAATaGCCCCCTCACACACAGGGA +
Preference number: 2 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSAGRQE*PPHTQG
Trigger: TCCCTGTGTGTGAGGGGGGCATTCTTGCCTGCCAGC...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR GCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCTTCGCACCATTCTCCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 2 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSFAPFS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGGAGAATGGTGCGAA...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCAGAGGGAGGGGCTTGTaGCAGTGGCTGAACTGTACA +
Preference number: 2 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPRGRGL*QWLNCT
Trigger: TGTACAGTTCAGCCACTGCCACAAGCCCCTCCCTCT...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCGCTGGACTGTACAGATaGGTGAATGGCTGGGGTCAG +
Preference number: 2 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPAGLYR*VNGWGQ
Trigger: CTGACCCCAGCCATTCACCCATCTGTACAGTCCAGC...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR TCA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGAACAGCCCCACGCAAATaGACCCCTCCTGGTCAGTGG +
Preference number: 2 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARTAPRK*TPPGQW
Trigger: CCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGT...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR TCA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCGTACAGATGGATGGATaGTCCAGGCCAACAGCCCCA +
Preference number: 2 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLVQMDG*SRPTAP
Trigger: TGGGGCTGTTGGCCTGGATCATCCATCCATCTGTAC...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR GCA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCTGGTGCACACCACCCTaGTGGAAACTCCAAGTCAGC +
Preference number: 2 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLWCTPP*WKLQVS
Trigger: GCTGACTTGGAGTTTCCAGCAGGGTGGTGTGCACCA...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCTGCACACCACCCTGCTaGAAACTCCAAGTCAGCAGT +
Preference number: 2 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPCTPPC*KLQVSS
Trigger: ACTGCTGACTTGGAGTTTCCAGCAGGGTGGTGTGCA...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCCAAATGAACCCCTCCTaGTCAGTGGTGCACACCACC +
Preference number: 2 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSQMNPS*SVVHTT
Trigger: GGTGGTGTGCACCACTGACCAGGAGGGGTTCATTTG...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCGTACAGATGGGTGAATaGCTGGGGTCAGGGGTGACA +
Preference number: 2 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSVQMGE*LGSGVT
Trigger: TGTCACCCCTGACCCCAGCCATTCACCCATCTGTAC...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCGCTGGACTGTACAGATaGGTGAATGGCTGGGGTCAG +
Preference number: 2 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSAGLYR*VNGWGQ
Trigger: CTGACCCCAGCCATTCACCCATCTGTACAGTCCAGC...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCGCTGGACTGTACAGATaGGTGAATGGCTGGGGTCAG +
Preference number: 2 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLAGLYR*VNGWGQ
Trigger: CTGACCCCAGCCATTCACCCATCTGTACAGTCCAGC...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR TCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCAACAGCCCCACGCAAATaGACCCCTCCTGGTCAGTGG +
Preference number: 2 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPTAPRK*TPPGQW
Trigger: CCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGT...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR TCA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGAGACTGTACAGATGGGTaGATGGCTGGGGTCAGGGGT +
Preference number: 2 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARDCTDG*MAGVRG
Trigger: ACCCCTGACCCCAGCCATTCACCCATCTGTACAGTC...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR GCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCAACCTCTTCTACCGCTaGAAGGCCTTTTCCTCAGTG +
Preference number: 2 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPNLFYR*KAFSSV
Trigger: CACTGAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTT...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGAGGGGTGGTAACCGAGTaGGGCTTATGTCAGTGGCTG +
Preference number: 2 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARGVVTE*GLCQWL
Trigger: CAGCCACTGACATAAGCCCCACTCGGTTACCACCCC...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCAGCAGGGACTAGGATaGCCTTATAAAGGGCGCAAG +
Preference number: 2 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSQQGLG*PYKGRK
Trigger: CTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR TCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGACAGCCCCACGCAAATaGACCCCTCCTGGTCAGTGG +
Preference number: 2 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGTAPRK*TPPGQW
Trigger: CCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGT...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR TCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCAGACTGTACAGATGGGTaGATGGCTGGGGTCAGGGGT +
Preference number: 2 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPDCTDG*MAGVRG
Trigger: ACCCCTGACCCCAGCCATTCACCCATCTGTACAGTC...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR TCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCGCACACTTCTCTCTGTaGGTGTGCCCATCTATGTGT +
Preference number: 2 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSAHFSL*VCPSMC
Trigger: ACACATAGATGGGCACACTCACAGAGAGAAGTGTGC...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR GCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCCAAGCATCAAAGTCCTaGACGAAGCCTCTTCAAAGG +
Preference number: 2 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPQASKS*TKPLQR
Trigger: CCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTG...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCAGGGGTGGTAACCGAGTaGGGCTTATGTCAGTGGCTG +
Preference number: 2 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPGVVTE*GLCQWL
Trigger: CAGCCACTGACATAAGCCCCACTCGGTTACCACCCC...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp ACCCTTTATGACCTTCTTTCTAGCTCTCTGGCACAGGTAGGGCTGTCTGGGGGAGCAGCCAGGCCCACCTaGGAGTCAACACGGAACACC +
Preference number: 2 (lower is better)
Translates to: TLYDLLSSSLAQVGLSGGAARPT*ESTRNT
Trigger: GGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGC...TCCCCCAGACAGCCCTACCTGTGCCAGAGAGCTAGAAAGAAGGTCATAAAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCCCTGTCAGGGCTGCTTaGAGGTCAAATTTCCTTTCA +
Preference number: 2 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPPVRAA*RSNFLS
Trigger: TGAAAGGAAATTTGACCTCCAAGCAGCCCTGACAGG...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR TCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGGCAGATGTGCCAATATaGGAGGAATGGGCAGTGGGC +
Preference number: 2 (lower is better)
Translates to: GLIKGARTAETKHKGRARADVPI*EEWAVG
Trigger: GCCCACTGCCCATTCCTCTCATATTGGCACATCTGC...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR GCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCATGGTGCACACCACCCTaGTGGAAACTCCAAGTCAGC +
Preference number: 2 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPWCTPP*WKLQVS
Trigger: GCTGACTTGGAGTTTCCAGCAGGGTGGTGTGCACCA...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR GCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGCCTCCTGGTCAGTGGTaGACACCACCCTGCTGGAAA +
Preference number: 2 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGPPGQW*TPPCWK
Trigger: TTTCCAGCAGGGTGGTGTGCACCACTGACCAGGAGG...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR GCA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCCAAGCATCAAAGTCCTaGACGAAGCCTCTTCAAAGG +
Preference number: 2 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLQASKS*TKPLQR
Trigger: CCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTG...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGCAAATGAACCCCTCCTaGTCAGTGGTGCACACCACC +
Preference number: 2 (lower is better)
Translates to: GLIKGARTAETKHKGRARQMNPS*SVVHTT
Trigger: GGTGGTGTGCACCACTGACCAGGAGGGGTTCATTTG...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCGCTGAACTGTACAGATaGATGGATGATCCAGGCCAA +
Preference number: 2 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSAELYR*MDDPGQ
Trigger: TTGGCCTGGATCATCCATCCATCTGTACAGTTCAGC...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGAGAGGGAGGGGCTTGTaGCAGTGGCTGAACTGTACA +
Preference number: 2 (lower is better)
Translates to: GLIKGARTAETKHKGRARRGRGL*QWLNCT
Trigger: TGTACAGTTCAGCCACTGCCACAAGCCCCTCCCTCT...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGGTACAGATGGGTGAATaGCTGGGGTCAGGGGTGACA +
Preference number: 2 (lower is better)
Translates to: GLIKGARTAETKHKGRARVQMGE*LGSGVT
Trigger: TGTCACCCCTGACCCCAGCCATTCACCCATCTGTAC...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGGCTGGACTGTACAGATaGGTGAATGGCTGGGGTCAG +
Preference number: 2 (lower is better)
Translates to: GLIKGARTAETKHKGRARAGLYR*VNGWGQ
Trigger: CTGACCCCAGCCATTCACCCATCTGTACAGTCCAGC...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCAGCAGCCAGGCCCACCTaGGAGTCAACACGGAACACC +
Preference number: 2 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKAAARPT*ESTRNT
Trigger: GGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGC...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCTGTCAGGGCTGCTTaGAGGTCAAATTTCCTTTCA +
Preference number: 2 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSPVRAA*RSNFLS
Trigger: TGAAAGGAAATTTGACCTCCAAGCAGCCCTGACAGG...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR TCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGGTACAGATGGATGGATaGTCCAGGCCAACAGCCCCA +
Preference number: 2 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGVQMDG*SRPTAP
Trigger: TGGGGCTGTTGGCCTGGATCATCCATCCATCTGTAC...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR TCA 90 bp TTCAGCTCTAGTGCAGGGTGCATCCCAGCAACCGACTTAACCAGATACAGAGCTTCTGGGGGAGGAAACTaGGAACCCCCAATGGACAGC +
Preference number: 2 (lower is better)
Translates to: FSSSAGCIPATDLTRYRASGGGN*EPPMDS
Trigger: GCTGTCCATTGGGGGTTCTCAGTTTCCTCCCCCAGA...AGCTCTGTATCTGGTTAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR GCA 90 bp ACCCTTTATGACCTTCTTTCTAGCTCTCTGGCACAGGTAGGGCTGTCTGGGGGATGGTGCACACCACCCTaGTGGAAACTCCAAGTCAGC +
Preference number: 2 (lower is better)
Translates to: TLYDLLSSSLAQVGLSGGWCTPP*WKLQVS
Trigger: GCTGACTTGGAGTTTCCAGCAGGGTGGTGTGCACCA...TCCCCCAGACAGCCCTACCTGTGCCAGAGAGCTAGAAAGAAGGTCATAAAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGAGCTGAACTGTACAGATaGATGGATGATCCAGGCCAA +
Preference number: 2 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARAELYR*MDDPGQ
Trigger: TTGGCCTGGATCATCCATCCATCTGTACAGTTCAGC...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp ACCCTTTATGACCTTCTTTCTAGCTCTCTGGCACAGGTAGGGCTGTCTGGGGGAAGAGGGAGGGGCTTGTaGCAGTGGCTGAACTGTACA +
Preference number: 2 (lower is better)
Translates to: TLYDLLSSSLAQVGLSGGRGRGL*QWLNCT
Trigger: TGTACAGTTCAGCCACTGCCACAAGCCCCTCCCTCT...TCCCCCAGACAGCCCTACCTGTGCCAGAGAGCTAGAAAGAAGGTCATAAAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR TCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCAGCAGATGTGCCAATATaGGAGGAATGGGCAGTGGGC +
Preference number: 2 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKAADVPI*EEWAVG
Trigger: GCCCACTGCCCATTCCTCTCATATTGGCACATCTGC...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR GCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGCAAGCATCAAAGTCCTaGACGAAGCCTCTTCAAAGG +
Preference number: 2 (lower is better)
Translates to: GLIKGARTAETKHKGRARQASKS*TKPLQR
Trigger: CCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTG...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp TGGCTGAACTGTACAGATGGATGGATGATCCAGGCCAACAGCCCCACGCAAATGTGCACACCACCCTGCTaGAAACTCCAAGTCAGCAGT +
Preference number: 2 (lower is better)
Translates to: WLNCTDGWMIQANSPTQMCTPPC*KLQVSS
Trigger: ACTGCTGACTTGGAGTTTCCAGCAGGGTGGTGTGCA...CATTTGCGTGGGGCTGTTGGCCTGGATCATCCATCCATCTGTACAGTTCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCAAGAGGGAGGGGCTTGTaGCAGTGGCTGAACTGTACA +
Preference number: 2 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKARGRGL*QWLNCT
Trigger: TGTACAGTTCAGCCACTGCCACAAGCCCCTCCCTCT...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp TTCAGCTCTAGTGCAGGGTGCATCCCAGCAACCGACTTAACCAGATACAGAGCTGTACAGATGGGTGAATaGCTGGGGTCAGGGGTGACA +
Preference number: 2 (lower is better)
Translates to: FSSSAGCIPATDLTRYRAVQMGE*LGSGVT
Trigger: TGTCACCCCTGACCCCAGCCATTCACCCATCTGTAC...AGCTCTGTATCTGGTTAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGCCTGTCAGGGCTGCTTaGAGGTCAAATTTCCTTTCA +
Preference number: 2 (lower is better)
Translates to: GLIKGARTAETKHKGRARPVRAA*RSNFLS
Trigger: TGAAAGGAAATTTGACCTCCAAGCAGCCCTGACAGG...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR GCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCAAGCTCTAGTGCAGGGTaGATCCCAGCAACCGACTTA +
Preference number: 2 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKASSSAG*IPATDL
Trigger: TAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCT...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAACAAATGAACCCCTCCTaGTCAGTGGTGCACACCACC +
Preference number: 2 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQQMNPS*SVVHTT
Trigger: GGTGGTGTGCACCACTGACCAGGAGGGGTTCATTTG...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR GCA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGCTCTAGTGCAGGGTaGATCCCAGCAACCGACTTA +
Preference number: 2 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQSSSAG*IPATDL
Trigger: TAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCT...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAATGCACACCACCCTGCTaGAAACTCCAAGTCAGCAGT +
Preference number: 2 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQCTPPC*KLQVSS
Trigger: ACTGCTGACTTGGAGTTTCCAGCAGGGTGGTGTGCA...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp TTCAGCTCTAGTGCAGGGTGCATCCCAGCAACCGACTTAACCAGATACAGAGCTACTGAGAACCCCCAATaGACAGCAGATGTGCCAATA +
Preference number: 2 (lower is better)
Translates to: FSSSAGCIPATDLTRYRATENPQ*TADVPI
Trigger: TATTGGCACATCTGCTGTCCATTGGGGGTTCTCAGT...AGCTCTGTATCTGGTTAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACCTGTCAGGGCTGCTTaGAGGTCAAATTTCCTTTCA +
Preference number: 2 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKAPVRAA*RSNFLS
Trigger: TGAAAGGAAATTTGACCTCCAAGCAGCCCTGACAGG...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR GCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCATGTGGTGTGTGTACATaGACACTTCTCTCTGTGAGT +
Preference number: 2 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKACGVCT*TLLSVS
Trigger: ACTCACAGAGAGAAGTGTGCATGTACACACACCACA...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAACTGTACAGATGGATaGATGATCCAGGCCAACAGC +
Preference number: 2 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQNCTDG*MIQANS
Trigger: GCTGTTGGCCTGGATCATCCATCCATCTGTACAGTT...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR TCA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTTCTGGGGGAGGAAACTaGGAACCCCCAATGGACAGC +
Preference number: 2 (lower is better)
Translates to: FHENELHNSVNAIFCTQPSGGGN*EPPMDS
Trigger: GCTGTCCATTGGGGGTTCTCAGTTTCCTCCCCCAGA...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR GCA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAATGTGGTGTGTGTACATaGACACTTCTCTCTGTGAGT +
Preference number: 2 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQCGVCT*TLLSVS
Trigger: ACTCACAGAGAGAAGTGTGCATGTACACACACCACA...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR TCA 90 bp CTTGGCTATATTCAGAGCACACAAGCTTTATTTAGCAACAATGGCAGTATTTCAGACTGTACAGATGGGTaGATGGCTGGGGTCAGGGGT +
Preference number: 2 (lower is better)
Translates to: LGYIQSTQALFSNNGSISDCTDG*MAGVRG
Trigger: ACCCCTGACCCCAGCCATTCACCCATCTGTACAGTC...TGAAATACTGCCATTGTTGCTAAATAAAGCTTGTGTGCTCTGAATATAGCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000416379.6
3UTR-3UTR GCA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTCAGGCTCTGTCATCCTaGTTCTTCCTTCTCAAGGCC +
Preference number: 2 (lower is better)
Translates to: FHENELHNSVNAIFCTQPQALSS*FFLLKA
Trigger: GGCCTTGAGAAGGAAGAAGCAGGATGACAGAGCCTG...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTTGCACACCACCCTGCTaGAAACTCCAAGTCAGCAGT +
Preference number: 2 (lower is better)
Translates to: FHENELHNSVNAIFCTQPCTPPC*KLQVSS
Trigger: ACTGCTGACTTGGAGTTTCCAGCAGGGTGGTGTGCA...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTCAGCAGGGACTAGGATaGCCTTATAAAGGGCGCAAG +
Preference number: 2 (lower is better)
Translates to: FHENELHNSVNAIFCTQPQQGLG*PYKGRK
Trigger: CTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR GCA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTCAAGCATCAAAGTCCTaGACGAAGCCTCTTCAAAGG +
Preference number: 2 (lower is better)
Translates to: FHENELHNSVNAIFCTQPQASKS*TKPLQR
Trigger: CCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTG...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR GCA 90 bp CTTGGCTATATTCAGAGCACACAAGCTTTATTTAGCAACAATGGCAGTATTTCACAGGCTCTGTCATCCTaGTTCTTCCTTCTCAAGGCC +
Preference number: 2 (lower is better)
Translates to: LGYIQSTQALFSNNGSISQALSS*FFLLKA
Trigger: GGCCTTGAGAAGGAAGAAGCAGGATGACAGAGCCTG...TGAAATACTGCCATTGTTGCTAAATAAAGCTTGTGTGCTCTGAATATAGCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000416379.6
3UTR-3UTR CCA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTGCTGAACTGTACAGATaGATGGATGATCCAGGCCAA +
Preference number: 2 (lower is better)
Translates to: FHENELHNSVNAIFCTQPAELYR*MDDPGQ
Trigger: TTGGCCTGGATCATCCATCCATCTGTACAGTTCAGC...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CCA 90 bp CTTGGCTATATTCAGAGCACACAAGCTTTATTTAGCAACAATGGCAGTATTTCATTTCTGCACACAGCCTaGGAGCAGATGGTTACAGCG +
Preference number: 2 (lower is better)
Translates to: LGYIQSTQALFSNNGSISFLHTA*EQMVTA
Trigger: CGCTGTAACCATCTGCTCCCAGGCTGTGTGCAGAAA...TGAAATACTGCCATTGTTGCTAAATAAAGCTTGTGTGCTCTGAATATAGCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000416379.6
3UTR-3UTR GCA 90 bp CTTGGCTATATTCAGAGCACACAAGCTTTATTTAGCAACAATGGCAGTATTTCAAAAGGGCGCAAGAACTaGAGAGACAAAGCACAAAGG +
Preference number: 2 (lower is better)
Translates to: LGYIQSTQALFSNNGSISKGRKN*RDKAQR
Trigger: CCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTT...TGAAATACTGCCATTGTTGCTAAATAAAGCTTGTGTGCTCTGAATATAGCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000416379.6
3UTR-3UTR TCA 90 bp CTTGGCTATATTCAGAGCACACAAGCTTTATTTAGCAACAATGGCAGTATTTCAAACCAGATACAGAGCTaGTCATCTGAAATGCCCATG +
Preference number: 2 (lower is better)
Translates to: LGYIQSTQALFSNNGSISNQIQS*SSEMPM
Trigger: CATGGGCATTTCAGATGATCAGCTCTGTATCTGGTT...TGAAATACTGCCATTGTTGCTAAATAAAGCTTGTGTGCTCTGAATATAGCCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000416379.6
3UTR-3UTR TCA 90 bp CTTGGCTATATTCAGAGCACACAAGCTTTATTTAGCAACAATGGCAGTATTTCAAGGCCTTTTCCTCAGTaGAAGTTTCACAGATGGGTT +
Preference number: 2 (lower is better)
Translates to: LGYIQSTQALFSNNGSISRPFPQ*KFHRWV
Trigger: AACCCATCTGTGAAACTTTCACTGAGGAAAAGGCCT...TGAAATACTGCCATTGTTGCTAAATAAAGCTTGTGTGCTCTGAATATAGCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000416379.6
3UTR-3UTR TCA 90 bp CTTGGCTATATTCAGAGCACACAAGCTTTATTTAGCAACAATGGCAGTATTTCATCTGAAATGCCCATGTaGCGCATGTGTTTATATTTC +
Preference number: 2 (lower is better)
Translates to: LGYIQSTQALFSNNGSISSEMPM*RMCLYF
Trigger: GAAATATAAACACATGCGTCACATGGGCATTTCAGA...TGAAATACTGCCATTGTTGCTAAATAAAGCTTGTGTGCTCTGAATATAGCCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000416379.6
3UTR CCA 72 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTaGTCAGTGGTGCACACCACCCTGCTGGAAACTCCA +
Preference number: 3 (lower is better)
Translates to: IQANSPTQMNPS*SVVHTTLLETP
Trigger: TGGAGTTTCCAGCAGGGTGGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CAA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCACCTGTCAGGGCTGCTaGGAGGTCAAATTTCCTTTC +
Preference number: 3 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSTCQGC*EVKFPF
Trigger: GAAAGGAAATTTGACCTCCAAGCAGCCCTGACAGGT...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CAA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCACCTGTCAGGGCTGCTaGGAGGTCAAATTTCCTTTC +
Preference number: 3 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLTCQGC*EVKFPF
Trigger: GAAAGGAAATTTGACCTCCAAGCAGCCCTGACAGGT...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR GCA 72 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTaGAGAGACAAAGCACAAAGGGAGGGCCCGGGCCCA +
Preference number: 3 (lower is better)
Translates to: QGLGWPYKGRKN*RDKAQREGPGP
Trigger: TGGGCCCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR CCA 72 bp GTAAATGCCATTTTCTGCACACAGCCTGGGAGCAGATaGTTACAGCGACAGAGCCCAGACCCCACAGTCCTC +
Preference number: 3 (lower is better)
Translates to: VNAIFCTQPGSR*LQRQSPDPTVL
Trigger: GAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTGTGCAGAAAATGGCATTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CAA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAACCTGTCAGGGCTGCTaGGAGGTCAAATTTCCTTTC +
Preference number: 3 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQTCQGC*EVKFPF
Trigger: GAAAGGAAATTTGACCTCCAAGCAGCCCTGACAGGT...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR GCA 72 bp TTGGAGGTCAAATTTCCTTTCAGCTCTAGTGCAGGGTaGATCCCAGCAACCGACTTAACCAGATACAGAGCT +
Preference number: 3 (lower is better)
Translates to: LEVKFPFSSSAG*IPATDLTRYRA
Trigger: AGCTCTGTATCTGGTTAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCTGAAAGGAAATTTGACCTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
3UTR-3UTR CAA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTACCTGTCAGGGCTGCTaGGAGGTCAAATTTCCTTTC +
Preference number: 3 (lower is better)
Translates to: FHENELHNSVNAIFCTQPTCQGC*EVKFPF
Trigger: GAAAGGAAATTTGACCTCCAAGCAGCCCTGACAGGT...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCGAGGCGCGACCACACTaGCTGGGCCATTGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPEARPH*LGHCGA
Trigger: GGCCCCGCAATGGCCCAGGCAGTGTGGTCGCGCCTC...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339375.9
CDS-3UTR CCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCGCGACCACACTGCCTaGGCCATTGCGGGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSRDHTA*AIAGPG
Trigger: TCCGGGCCCCGCAATGGCCCAGGCAGTGTGGTCGCG...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339375.9
CDS-3UTR TCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCCACCGCGCCCGGCCTTaGCTCAACCTCTTCTACCGC +
Preference number: 4 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPHRARP*LNLFYR
Trigger: GCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTG...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCGAGGCGCGACCACACTaGCTGGGCCATTGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTEARPH*LGHCGA
Trigger: GGCCCCGCAATGGCCCAGGCAGTGTGGTCGCGCCTC...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000345589.4
CDS-3UTR GCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCGAGTTCATACAGGCCTaGGGCCACCCCTGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSEFIQA*GHPCRG
Trigger: GCCCCGGCAGGGGTGGCCGCAGGCCTGTATGAACTC...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000416379.6
CDS-3UTR GCA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCCGGGCAGGGCCAGGCTaGCGTTGTCCTTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLRAGPG*RCPWPP
Trigger: TGGTGGCCAAGGACAACGGCAGCCTGGCCCTGCCCG...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCGGAGCGGGAGAAGCGTaGGGCGGACGCGGAGGGAAT +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSGAGEA*GGRGGN
Trigger: ATTCCCTCCGCGTCCGCCCCACGCTTCTCCCGCTCC...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339375.9
CDS-3UTR CCA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCGGAGCGGGAGAAGCGTaGGGCGGACGCGGAGGGAAT +
Preference number: 4 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLGAGEA*GGRGGN
Trigger: ATTCCCTCCGCGTCCGCCCCACGCTTCTCCCGCTCC...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000345589.4
CDS-3UTR CCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCGGCTGCCGTTGTCCTTaGCCACCAGGCTGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPGCRCP*PPGWPR
Trigger: TCTCGGCCAGCCTGGTGGCCAAGGACAACGGCAGCC...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCGCCACGGACACAGGGTaGCACTCCCCTTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPATDTG*HSPSSS
Trigger: GCTGGAGGAAGGGGAGTGCCACCCTGTGTCCGTGGC...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTCACCACCGCTCCCGTaGTGGCAGGGCTATCGGTGG +
Preference number: 4 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSSPPLP*WQGYRW
Trigger: CCACCGATAGCCCTGCCACCACGGGAGCGGTGGTGA...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCTCACCACCGCTCCCGTaGTGGCAGGGCTATCGGTGG +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSSPPLP*WQGYRW
Trigger: CCACCGATAGCCCTGCCACCACGGGAGCGGTGGTGA...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCCCTGGCCACAGGCTaGCACATCCAGCAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSPLATG*HIQQSA
Trigger: CGCTGACTGCTGGATGTGCCAGCCTGTGGCCAGGGG...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCAGTCCCCAGGGTCCCTaGAGGTGTGGGTCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPSPQGP*RCGSGC
Trigger: ACAACCTGACCCACACCTTCAGGGACCCTGGGGACT...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGATCTGGCAGCAGCACCTaGCCCCAGAGGGTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARSGSST*PQRVAP
Trigger: CGGAGCCACCCTCTGGGGTCAGGTGCTGCTGCCAGA...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCCACCGCGCCCGGCCTTaGCTCAACCTCTTCTACCGC +
Preference number: 4 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTHRARP*LNLFYR
Trigger: GCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTG...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCTCCCCTGCCCTTCCTaGCAGGCTCCGGCTACTTCT +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSLPCPS*QAPATS
Trigger: AGAAGTAGCCGGAGCCTGTCAGGAAGGGCAGGGGAG...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGCACTGCCTGGGCCATTaGGGGGCCCGGAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRARHCLGH*GARSGR
Trigger: TCTCCCGCTCCGGGCCCCGCAATGGCCCAGGCAGTG...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000345589.4
CDS-3UTR GCA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGACCCCATCCAGCCCCCTaGCAGCCAGCAGGGACTAGG +
Preference number: 4 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARPHPAP*QPAGTR
Trigger: CCTAGTCCCTGCTGGCTGGCAGGGGGCTGGATGGGG...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCTGGCAGAAAGGTGGGTaGTGGCCTTCTGGCGATGGG +
Preference number: 4 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPWQKGG*WPSGDG
Trigger: CCCATCGCCAGAAGGCCAGCACCCACCTTTCTGCCA...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450876.5
CDS-3UTR CCA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCCCTTGGCCACCAGGCTaGCCGAGATGGTCACCACCG +
Preference number: 4 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTPWPPG*PRWSPP
Trigger: CGGTGGTGACCATCTCGGCCAGCCTGGTGGCCAAGG...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCACCCCTCCTGGTCAGTaGTGCACACCACCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSTPPGQ*CTPPCW
Trigger: CCAGCAGGGTGGTGTGCACCACTGACCAGGAGGGGT...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCGCAGCCAGGCCCACCTaGGAGTCAACACGGAACACC +
Preference number: 4 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLAARPT*ESTRNT
Trigger: GGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGC...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCAGGGAGGGTGCAGGCTaGTTCCGCTGCTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSREGAG*FRCSGS
Trigger: AGAGCCTGAGCAGCGGAACCAGCCTGCACCCTCCCT...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCGGAGGCACTCAGGCTTaGGACGCCAGCACACAGTCA +
Preference number: 4 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSGGTQA*DASTQS
Trigger: TGACTGTGTGCTGGCGTCTCAAGCCTGAGTGCCTCC...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCGGAGGCACTCAGGCTTaGGACGCCAGCACACAGTCA +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSGGTQA*DASTQS
Trigger: TGACTGTGTGCTGGCGTCTCAAGCCTGAGTGCCTCC...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCTCTCGGCCCGGATGCTaGAGCAGTAGTCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTSRPGC*SSSPQG
Trigger: ACCCTGGGGACTACTGCTTCAGCATCCGGGCCGAGA...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCATCTGGCAGCAGCACCTaGCCCCAGAGGGTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPSGSST*PQRVAP
Trigger: CGGAGCCACCCTCTGGGGTCAGGTGCTGCTGCCAGA...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCACAGCCCCACGCAAATaGACCCCTCCTGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSTAPRK*TPPGQW
Trigger: CCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGT...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCACAGCCCCACGCAAATaGACCCCTCCTGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSTAPRK*TPPGQW
Trigger: CCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGT...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCACTGGAGCTCGAGAACTaGGGCGGTCGCTCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPLELEN*GGRSSG
Trigger: CCCGGAGGAGCGACCGCCGCAGTTCTCGAGCTCCAG...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000345589.4
CDS-3UTR GCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCGGACGCGGAGGGAATaGAGCTGGAGCTCGAGAACT +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSRTRRE*SWSSRT
Trigger: AGTTCTCGAGCTCCAGCTGCATTCCCTCCGCGTCCG...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339375.9
CDS-3UTR GCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGGAGTTCATACAGGCCTaGGGCCACCCCTGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRAREFIQA*GHPCRG
Trigger: GCCCCGGCAGGGGTGGCCGCAGGCCTGTATGAACTC...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000416379.6
CDS-3UTR GCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCACGGGCAGGGCCAGGCTaGCGTTGTCCTTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPRAGPG*RCPWPP
Trigger: TGGTGGCCAAGGACAACGGCAGCCTGGCCCTGCCCG...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGCCCCATCCAGCCCCCTaGCAGCCAGCAGGGACTAGG +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRARPHPAP*QPAGTR
Trigger: CCTAGTCCCTGCTGGCTGGCAGGGGGCTGGATGGGG...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCGCAGGCTGGTTCCGCTaGTCAGGCTCTGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSAGWFR*SGSVIL
Trigger: CAGGATGACAGAGCCTGAGCAGCGGAACCAGCCTGC...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCGCTTCACAGCCCTCGTaGCATCCGGCTCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLASQPS*HPAPPL
Trigger: AAGAGGTGGAGCCGGATGCCACGAGGGCTGTGAAGC...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGAGCCACGGACACAGGGTaGCACTCCCCTTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARATDTG*HSPSSS
Trigger: GCTGGAGGAAGGGGAGTGCCACCCTGTGTCCGTGGC...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCCAGCCGGCTGGATTCTaGAGGGCCACACCTGGATCT +
Preference number: 4 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSQPAGF*RATPGS
Trigger: AGATCCAGGTGTGGCCCTCCAGAATCCAGCCGGCTG...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCGCAAAGACAGCCGGCTaGATTCTGGAGGGCCACACC +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSAKTAG*ILEGHT
Trigger: GGTGTGGCCCTCCAGAATCCAGCCGGCTGTCTTTGC...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCCCTGACCCCAGAGGGTaGCTCCGGGTTCTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLPDPRG*LRVLVR
Trigger: TCTGACAAGAACCCGGAGCCACCCTCTGGGGTCAGG...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416379.6
CDS-3UTR TCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCACGGATGGTGGAGCTaGGACCCTTCTCCATCTTGC +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSHGWWS*DPSPSC
Trigger: GCAAGATGGAGAAGGGTCTCAGCTCCACCATCCGTG...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCACGAGGAACTCTGTaGTGGGGAGGACCACAAAGC +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSPRGTL*WGGPQS
Trigger: GCTTTGTGGTCCTCCCCATCACAGAGTTCCTCGTGG...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGTCTGGCAGCAGCACCTaGCCCCAGAGGGTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGSGSST*PQRVAP
Trigger: CGGAGCCACCCTCTGGGGTCAGGTGCTGCTGCCAGA...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCACAGCCCCACGCAAATaGACCCCTCCTGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTTAPRK*TPPGQW
Trigger: CCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGT...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCGTACAGATGGATGGATaGTCCAGGCCAACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPVQMDG*SRPTAP
Trigger: TGGGGCTGTTGGCCTGGATCATCCATCCATCTGTAC...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCTCTGGGGGAGGAAACTaGGAACCCCCAATGGACAGC +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSSGGGN*EPPMDS
Trigger: GCTGTCCATTGGGGGTTCTCAGTTTCCTCCCCCAGA...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGCACCGCGCCCGGCCTTaGCTCAACCTCTTCTACCGC +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRARHRARP*LNLFYR
Trigger: GCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTG...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCCCTCGAAGGGTTTCCTaGAGCTTCAGCGAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTPRRVS*SFSEAE
Trigger: CTCCGCCTCGCTGAAGCTGCAGGAAACCCTTCGAGG...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTCAGGTTGTACGCTGTaGTGGCCACGGACACAGGGT +
Preference number: 4 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSSGCTL*WPRTQG
Trigger: ACCCTGTGTCCGTGGCCAGCACAGCGTACAACCTGA...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCCCTCCTGGTCAGTGGTaGACACCACCCTGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSPPGQW*TPPCWK
Trigger: TTTCCAGCAGGGTGGTGTGCACCACTGACCAGGAGG...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCCCTCCTGGTCAGTGGTaGACACCACCCTGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLPPGQW*TPPCWK
Trigger: TTTCCAGCAGGGTGGTGTGCACCACTGACCAGGAGG...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCGCAGGCTGGTTCCGCTaGTCAGGCTCTGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTAGWFR*SGSVIL
Trigger: CAGGATGACAGAGCCTGAGCAGCGGAACCAGCCTGC...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGACGGAGGGAATGCAGCTaGAGCTCGAGAACTGCGGCG +
Preference number: 4 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARRRECS*SSRTAA
Trigger: CGCCGCAGTTCTCGAGCTCCAGCTGCATTCCCTCCG...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000345589.4
CDS-3UTR CCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCATCACCACCGCTCCCGTaGTGGCAGGGCTATCGGTGG +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPSPPLP*WQGYRW
Trigger: CCACCGATAGCCCTGCCACCACGGGAGCGGTGGTGA...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGCCCCTGGCCACAGGCTaGCACATCCAGCAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRARPLATG*HIQQSA
Trigger: CGCTGACTGCTGGATGTGCCAGCCTGTGGCCAGGGG...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCTCTTCAGTCACCATCTaGGTCCCGTCCCCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLSSVTI*VPSPKS
Trigger: GGACTTCGGGGACGGGACCCAGATGGTGACTGAAGA...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTCTTCAGTCACCATCTaGGTCCCGTCCCCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSSSVTI*VPSPKS
Trigger: GGACTTCGGGGACGGGACCCAGATGGTGACTGAAGA...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCAGCCACGGACACAGGGTaGCACTCCCCTTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPATDTG*HSPSSS
Trigger: GCTGGAGGAAGGGGAGTGCCACCCTGTGTCCGTGGC...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGAGGTTGTACGCTGTGCTaGCCACGGACACAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARGCTLC*PRTQGG
Trigger: GCCACCCTGTGTCCGTGGCCAGCACAGCGTACAACC...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCGGGTCCCTGAAGGTGTaGGTCAGGTTGTACGCTGTG +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSGSLKV*VRLYAV
Trigger: CACAGCGTACAACCTGACCCACACCTTCAGGGACCC...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCCAGCCGGCTGGATTCTaGAGGGCCACACCTGGATCT +
Preference number: 4 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTQPAGF*RATPGS
Trigger: AGATCCAGGTGTGGCCCTCCAGAATCCAGCCGGCTG...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCGTACAGATGGGTGAATaGCTGGGGTCAGGGGTGACA +
Preference number: 4 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPVQMGE*LGSGVT
Trigger: TGTCACCCCTGACCCCAGCCATTCACCCATCTGTAC...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGAGCAGCCAGGCCCACCTaGGAGTCAACACGGAACACC +
Preference number: 4 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARAARPT*ESTRNT
Trigger: GGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGC...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCCAGCCTGGGAGCAGATaGTTACAGCGACAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSQPGSR*LQRQSP
Trigger: TGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCCAGCCTGGGAGCAGATaGTTACAGCGACAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLQPGSR*LQRQSP
Trigger: TGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCATCTGACGGATGCGTaGGCCACCCTCGTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSHLTDA*ATLVWF
Trigger: AAACCACACGAGGGTGGCCCACGCATCCGTCAGATG...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450876.5
CDS-3UTR TCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCAAGCAGTCAGCGGCAGTaGCCCAGACAGAGACCGGGA +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPSSQRQ*PRQRPG
Trigger: TCCCGGTCTCTGTCTGGGTCACTGCCGCTGACTGCT...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCGGGAAGTGTTCTGGGTaGCAACAAGGTCCCCCACGA +
Preference number: 4 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTGKCSG*QQGPPR
Trigger: TCGTGGGGGACCTTGTTGTCACCCAGAACACTTCCC...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCGAAACAAGGCGGTCTTaGGGAAGTTGCTCGGGTCGT +
Preference number: 4 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSETRRS*GSCSGR
Trigger: ACGACCCGAGCAACTTCCTCAAGACCGCCTTGTTTC...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCATCTCGGCCCGGATGCTaGAGCAGTAGTCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPSRPGC*SSSPQG
Trigger: ACCCTGGGGACTACTGCTTCAGCATCCGGGCCGAGA...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCGCAGATGTGCCAATATaGGAGGAATGGGCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSADVPI*EEWAVG
Trigger: GCCCACTGCCCATTCCTCTCATATTGGCACATCTGC...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGCTCCCCTGCCCTTCCTaGCAGGCTCCGGCTACTTCT +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRARLPCPS*QAPATS
Trigger: AGAAGTAGCCGGAGCCTGTCAGGAAGGGCAGGGGAG...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCACTCCCCTGCCCTTCCTaGCAGGCTCCGGCTACTTCT +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPLPCPS*QAPATS
Trigger: AGAAGTAGCCGGAGCCTGTCAGGAAGGGCAGGGGAG...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp TGGCTGAACTGTACAGATGGATGGATGATCCAGGCCAACAGCCCCACGCAAATGCTGGAGCTCGAGAACTaGGGCGGTCGCTCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: WLNCTDGWMIQANSPTQMLELEN*GGRSSG
Trigger: CCCGGAGGAGCGACCGCCGCAGTTCTCGAGCTCCAG...CATTTGCGTGGGGCTGTTGGCCTGGATCATCCATCCATCTGTACAGTTCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000345589.4
CDS-3UTR GCA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCGCCCCAACACTTGGATaGCTCGAAGGGTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSAPTLG*LEGFPA
Trigger: TGCAGGAAACCCTTCGAGGCATCCAAGTGTTGGGGC...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGGTGCACACCACCCTaGTGGAAACTCCAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSWCTPP*WKLQVS
Trigger: GCTGACTTGGAGTTTCCAGCAGGGTGGTGTGCACCA...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp ACCCTTTATGACCTTCTTTCTAGCTCTCTGGCACAGGTAGGGCTGTCTGGGGGACCCCATCCAGCCCCCTaGCAGCCAGCAGGGACTAGG +
Preference number: 4 (lower is better)
Translates to: TLYDLLSSSLAQVGLSGGPHPAP*QPAGTR
Trigger: CCTAGTCCCTGCTGGCTGGCAGGGGGCTGGATGGGG...TCCCCCAGACAGCCCTACCTGTGCCAGAGAGCTAGAAAGAAGGTCATAAAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGAGCTGGCAGGCAAGAATaGCCCCCTCACACACAGGGA +
Preference number: 4 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARAGRQE*PPHTQG
Trigger: TCCCTGTGTGTGAGGGGGGCATTCTTGCCTGCCAGC...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCCAGGCTCTGTCATCCTaGTTCTTCCTTCTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPQALSS*FFLLKA
Trigger: GGCCTTGAGAAGGAAGAAGCAGGATGACAGAGCCTG...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGACAGACATCTGACGGATaGGTGGGCCACCCTCGTGTG +
Preference number: 4 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARQTSDG*VGHPRV
Trigger: CACACGAGGGTGGCCCACGCATCCGTCAGATGTCTG...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450876.5
CDS-3UTR CCA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCGGTAGGGAAGTGTTCTaGGTGACAACAAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSGREVF*VTTRSP
Trigger: GGGGGACCTTGTTGTCACCCAGAACACTTCCCTACC...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCGTGGGCCCCAACACTTaGATGCCTCGAAGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTVGPNT*MPRRVS
Trigger: GGAAACCCTTCGAGGCATCCAAGTGTTGGGGCCCAC...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCGGGTCCCTGAAGGTGTaGGTCAGGTTGTACGCTGTG +
Preference number: 4 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTGSLKV*VRLYAV
Trigger: CACAGCGTACAACCTGACCCACACCTTCAGGGACCC...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCACCTGACCCCAGAGGGTaGCTCCGGGTTCTCCACCAT +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPPDPRG*LRVLHH
Trigger: ATGGTGGAGAACCCGGAGCCACCCTCTGGGGTCAGG...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000450876.5
CDS-3UTR CCA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCCAAATGAACCCCTCCTaGTCAGTGGTGCACACCACC +
Preference number: 4 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLQMNPS*SVVHTT
Trigger: GGTGGTGTGCACCACTGACCAGGAGGGGTTCATTTG...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCGTACAGATGGGTGAATaGCTGGGGTCAGGGGTGACA +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSVQMGE*LGSGVT
Trigger: TGTCACCCCTGACCCCAGCCATTCACCCATCTGTAC...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGAGGGAAGTGTTCTGGGTaGCAACAAGGTCCCCCACGA +
Preference number: 4 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARGKCSG*QQGPPR
Trigger: TCGTGGGGGACCTTGTTGTCACCCAGAACACTTCCC...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCATCTTTTGGAAGGTCTaGATTAGGGTGGGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPIFWKV*IRVGPN
Trigger: GTTGGGGCCCACCCTAATTCAGACCTTCCAAAAGAT...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCAGGAGGCACTCAGGCTTaGGACGCCAGCACACAGTCA +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPGGTQA*DASTQS
Trigger: TGACTGTGTGCTGGCGTCTCAAGCCTGAGTGCCTCC...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGAGTCCCCAGGGTCCCTaGAGGTGTGGGTCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRARSPQGP*RCGSGC
Trigger: ACAACCTGACCCACACCTTCAGGGACCCTGGGGACT...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCACCATGTCCTTTTGCTaGGTGGCATTCCGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTTMSFC*VAFRRV
Trigger: GACCCTGCGGAATGCCACTCAGCAAAAGGACATGGT...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp ACCCTTTATGACCTTCTTTCTAGCTCTCTGGCACAGGTAGGGCTGTCTGGGGGAAGGCAAGCCAGAGGATaGGGCCGAGGCGCGACCACA +
Preference number: 4 (lower is better)
Translates to: TLYDLLSSSLAQVGLSGGRQARG*GRGATT
Trigger: TGTGGTCGCGCCTCGGCCGCATCCTCTGGCTTGCCT...TCCCCCAGACAGCCCTACCTGTGCCAGAGAGCTAGAAAGAAGGTCATAAAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
CDS-3UTR GCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCACCTCGAAGGGTTTCCTaGAGCTTCAGCGAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPPRRVS*SFSEAE
Trigger: CTCCGCCTCGCTGAAGCTGCAGGAAACCCTTCGAGG...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGATCAGGTTGTACGCTGTaGTGGCCACGGACACAGGGT +
Preference number: 4 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARSGCTL*WPRTQG
Trigger: ACCCTGTGTCCGTGGCCAGCACAGCGTACAACCTGA...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCGGTGGGGAGGGGGAGTaGTCACACGGTGTAAGTTTT +
Preference number: 4 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTGGEGE*SHGVSF
Trigger: AAAACTTACACCGTGTGAGCACTCCCCCTCCCCACC...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGACCTCCTGGTCAGTGGTaGACACCACCCTGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARPPGQW*TPPCWK
Trigger: TTTCCAGCAGGGTGGTGTGCACCACTGACCAGGAGG...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCAGGCTCTGTCATCCTaGTTCTTCCTTCTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSQALSS*FFLLKA
Trigger: GGCCTTGAGAAGGAAGAAGCAGGATGACAGAGCCTG...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp TGGCTGAACTGTACAGATGGATGGATGATCCAGGCCAACAGCCCCACGCAAATGGGCTGCCGTTGTCCTTaGCCACCAGGCTGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: WLNCTDGWMIQANSPTQMGCRCP*PPGWPR
Trigger: TCTCGGCCAGCCTGGTGGCCAAGGACAACGGCAGCC...CATTTGCGTGGGGCTGTTGGCCTGGATCATCCATCCATCTGTACAGTTCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCAGCTTCACAGCCCTCGTaGCATCCGGCTCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPASQPS*HPAPPL
Trigger: AAGAGGTGGAGCCGGATGCCACGAGGGCTGTGAAGC...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGAGTGGGCCCCAACACTTaGATGCCTCGAAGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARVGPNT*MPRRVS
Trigger: GGAAACCCTTCGAGGCATCCAAGTGTTGGGGCCCAC...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCAGGTCTGAATTAGGGTaGGCCCCAACACTTGGATGC +
Preference number: 4 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLRSELG*APTLGC
Trigger: GCATCCAAGTGTTGGGGCCCACCCTAATTCAGACCT...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCAGGTCTGAATTAGGGTaGGCCCCAACACTTGGATGC +
Preference number: 4 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSRSELG*APTLGC
Trigger: GCATCCAAGTGTTGGGGCCCACCCTAATTCAGACCT...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCACAGCCGGCTGGATTCTaGAGGGCCACACCTGGATCT +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPQPAGF*RATPGS
Trigger: AGATCCAGGTGTGGCCCTCCAGAATCCAGCCGGCTG...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGACCCCTCCTGGTCAGTaGTGCACACCACCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGTPPGQ*CTPPCW
Trigger: CCAGCAGGGTGGTGTGCACCACTGACCAGGAGGGGT...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCCAAATGAACCCCTCCTaGTCAGTGGTGCACACCACC +
Preference number: 4 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTQMNPS*SVVHTT
Trigger: GGTGGTGTGCACCACTGACCAGGAGGGGTTCATTTG...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCGGCTCCGGCTACTTCTaGCCTCATTATTGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSGSGYF*PHYCLS
Trigger: GCTGAGACAATAATGAGGCCAGAAGTAGCCGGAGCC...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGCATCACCTGTCCCTGTaGGGGACTCCAGCTCCGACC +
Preference number: 4 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGHHLSL*GTPAPT
Trigger: GGTCGGAGCTGGAGTCCCCCACAGGGACAGGTGATG...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450876.5
CDS-3UTR TCA 90 bp ACCCTTTATGACCTTCTTTCTAGCTCTCTGGCACAGGTAGGGCTGTCTGGGGGAAGCAGTCAGCGGCAGTaGCCCAGACAGAGACCGGGA +
Preference number: 4 (lower is better)
Translates to: TLYDLLSSSLAQVGLSGGSSQRQ*PRQRPG
Trigger: TCCCGGTCTCTGTCTGGGTCACTGCCGCTGACTGCT...TCCCCCAGACAGCCCTACCTGTGCCAGAGAGCTAGAAAGAAGGTCATAAAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGCCACGAGGAACTCTGTaGTGGGGAGGACCACAAAGC +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRARPRGTL*WGGPQS
Trigger: GCTTTGTGGTCCTCCCCATCACAGAGTTCCTCGTGG...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCACCACGAGGAACTCTGTaGTGGGGAGGACCACAAAGC +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPPRGTL*WGGPQS
Trigger: GCTTTGTGGTCCTCCCCATCACAGAGTTCCTCGTGG...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCAGGGAAGTGTTCTGGGTaGCAACAAGGTCCCCCACGA +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPGKCSG*QQGPPR
Trigger: TCGTGGGGGACCTTGTTGTCACCCAGAACACTTCCC...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGAGTCCCCAGGGTCCCTaGAGGTGTGGGTCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGSPQGP*RCGSGC
Trigger: ACAACCTGACCCACACCTTCAGGGACCCTGGGGACT...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCACACGGTGTAAGTTTTaGCAGACTTATAGAGGGGCG +
Preference number: 4 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPTRCKF*QTYRGA
Trigger: CGCCCCTCTATAAGTCTGTCAAAACTTACACCGTGT...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGAGCAGATGTGCCAATATaGGAGGAATGGGCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARADVPI*EEWAVG
Trigger: GCCCACTGCCCATTCCTCTCATATTGGCACATCTGC...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCACAGAGCTGATCATCTaGAATGCCCATGTGACGCAT +
Preference number: 4 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPTELII*NAHVTH
Trigger: ATGCGTCACATGGGCATTTCAGATGATCAGCTCTGT...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp TTCAGCTCTAGTGCAGGGTGCATCCCAGCAACCGACTTAACCAGATACAGAGCTAGGCAAGCCAGAGGATaGGGCCGAGGCGCGACCACA +
Preference number: 4 (lower is better)
Translates to: FSSSAGCIPATDLTRYRARQARG*GRGATT
Trigger: TGTGGTCGCGCCTCGGCCGCATCCTCTGGCTTGCCT...AGCTCTGTATCTGGTTAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
CDS-3UTR GCA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAACGGGCAGGGCCAGGCTaGCGTTGTCCTTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQRAGPG*RCPWPP
Trigger: TGGTGGCCAAGGACAACGGCAGCCTGGCCCTGCCCG...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGTCAGGTTGTACGCTGTaGTGGCCACGGACACAGGGT +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRARSGCTL*WPRTQG
Trigger: ACCCTGTGTCCGTGGCCAGCACAGCGTACAACCTGA...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGAGGTGGGGAGGGGGAGTaGTCACACGGTGTAAGTTTT +
Preference number: 4 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARGGEGE*SHGVSF
Trigger: AAAACTTACACCGTGTGAGCACTCCCCCTCCCCACC...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGATGGTGCACACCACCCTaGTGGAAACTCCAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARWCTPP*WKLQVS
Trigger: GCTGACTTGGAGTTTCCAGCAGGGTGGTGTGCACCA...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCAACCTCTTCTACCGCTaGAAGGCCTTTTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSNLFYR*KAFSSV
Trigger: CACTGAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTT...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCATTCGCACCATTCTCCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPFAPFS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGGAGAATGGTGCGAA...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGTTCGCACCATTCTCCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRARFAPFS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGGAGAATGGTGCGAA...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCCAGGCTCTGTCATCCTaGTTCTTCCTTCTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTQALSS*FFLLKA
Trigger: GGCCTTGAGAAGGAAGAAGCAGGATGACAGAGCCTG...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp TTCAGCTCTAGTGCAGGGTGCATCCCAGCAACCGACTTAACCAGATACAGAGCTCCCCTGGCCACAGGCTaGCACATCCAGCAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: FSSSAGCIPATDLTRYRAPLATG*HIQQSA
Trigger: CGCTGACTGCTGGATGTGCCAGCCTGTGGCCAGGGG...AGCTCTGTATCTGGTTAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGAGGTAGGGAAGTGTTCTaGGTGACAACAAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARGREVF*VTTRSP
Trigger: GGGGGACCTTGTTGTCACCCAGAACACTTCCCTACC...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCATCTTCAGTCACCATCTaGGTCCCGTCCCCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPSSVTI*VPSPKS
Trigger: GGACTTCGGGGACGGGACCCAGATGGTGACTGAAGA...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGGCTTCACAGCCCTCGTaGCATCCGGCTCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGASQPS*HPAPPL
Trigger: AAGAGGTGGAGCCGGATGCCACGAGGGCTGTGAAGC...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCAGGGTCCCTGAAGGTGTaGGTCAGGTTGTACGCTGTG +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPGSLKV*VRLYAV
Trigger: CACAGCGTACAACCTGACCCACACCTTCAGGGACCC...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGGCAAAGACAGCCGGCTaGATTCTGGAGGGCCACACC +
Preference number: 4 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGAKTAG*ILEGHT
Trigger: GGTGTGGCCCTCCAGAATCCAGCCGGCTGTCTTTGC...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCTGTCCTTTTGCTGAGTaGCATTCCGCAGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSCPFAE*HSAGSC
Trigger: ACATGACCCTGCGGAATGCCACTCAGCAAAAGGACA...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp TGGCTGAACTGTACAGATGGATGGATGATCCAGGCCAACAGCCCCACGCAAATGCCTGACCCCAGAGGGTaGCTCCGGGTTCTCCACCAT +
Preference number: 4 (lower is better)
Translates to: WLNCTDGWMIQANSPTQMPDPRG*LRVLHH
Trigger: ATGGTGGAGAACCCGGAGCCACCCTCTGGGGTCAGG...CATTTGCGTGGGGCTGTTGGCCTGGATCATCCATCCATCTGTACAGTTCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000450876.5
CDS-3UTR CCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCAGGCGGGAGCAGCCCGTaGTTCTCACGAACAATTTCC +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPGGSSP*FSRTIS
Trigger: GGAAATTGTTCGTGAGAACCACGGGCTGCTCCCGCC...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCTGCACACCACCCTGCTaGAAACTCCAAGTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTCTPPC*KLQVSS
Trigger: ACTGCTGACTTGGAGTTTCCAGCAGGGTGGTGTGCA...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGACAAATGAACCCCTCCTaGTCAGTGGTGCACACCACC +
Preference number: 4 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARQMNPS*SVVHTT
Trigger: GGTGGTGTGCACCACTGACCAGGAGGGGTTCATTTG...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCGCTGAACTGTACAGATaGATGGATGATCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPAELYR*MDDPGQ
Trigger: TTGGCCTGGATCATCCATCCATCTGTACAGTTCAGC...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGGGGGTGGTAACCGAGTaGGGCTTATGTCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRARGVVTE*GLCQWL
Trigger: CAGCCACTGACATAAGCCCCACTCGGTTACCACCCC...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp TGGCTGAACTGTACAGATGGATGGATGATCCAGGCCAACAGCCCCACGCAAATGGCAGCCAGGCCCACCTaGGAGTCAACACGGAACACC +
Preference number: 4 (lower is better)
Translates to: WLNCTDGWMIQANSPTQMAARPT*ESTRNT
Trigger: GGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGC...CATTTGCGTGGGGCTGTTGGCCTGGATCATCCATCCATCTGTACAGTTCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCACTGAGAACCCCCAATaGACAGCAGATGTGCCAATA +
Preference number: 4 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPTENPQ*TADVPI
Trigger: TATTGGCACATCTGCTGTCCATTGGGGGTTCTCAGT...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCGGCTCCGGCTACTTCTaGCCTCATTATTGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTGSGYF*PHYCLS
Trigger: GCTGAGACAATAATGAGGCCAGAAGTAGCCGGAGCC...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCACACGTTCGCTGCTTTaGCCCACATCACGTATTTCC +
Preference number: 4 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSTRSLL*PTSRIS
Trigger: GGAAATACGTGATGTGGGCCAAAGCAGCGAACGTGT...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450876.5
CDS-3UTR CCA 90 bp TGGCTGAACTGTACAGATGGATGGATGATCCAGGCCAACAGCCCCACGCAAATGGTGTTCCCTGGGGGCTaGGGGTTGTGGCACGATGAC +
Preference number: 4 (lower is better)
Translates to: WLNCTDGWMIQANSPTQMVFPGG*GLWHDD
Trigger: GTCATCGTGCCACAACCCCCAGCCCCCAGGGAACAC...CATTTGCGTGGGGCTGTTGGCCTGGATCATCCATCCATCTGTACAGTTCAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACCATCCCGTGTTCCCTaGGGGCTGGGGGTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKAPSRVP*GLGVVA
Trigger: TGCCACAACCCCCAGCCCCCAGGGAACACGGGATGG...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCGCTCCAGGTCCATTTTaGGAAATCACTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPAPGPF*EITPGR
Trigger: TCTTCCAGGAGTGATTTCCCAAAATGGACCTGGAGC...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450876.5
CDS-3UTR TCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGCACGGATGGTGGAGCTaGGACCCTTCTCCATCTTGC +
Preference number: 4 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGHGWWS*DPSPSC
Trigger: GCAAGATGGAGAAGGGTCTCAGCTCCACCATCCGTG...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGGGGAAGTGTTCTGGGTaGCAACAAGGTCCCCCACGA +
Preference number: 4 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGGKCSG*QQGPPR
Trigger: TCGTGGGGGACCTTGTTGTCACCCAGAACACTTCCC...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCAGAAACAAGGCGGTCTTaGGGAAGTTGCTCGGGTCGT +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPETRRS*GSCSGR
Trigger: ACGACCCGAGCAACTTCCTCAAGACCGCCTTGTTTC...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGGAAACAAGGCGGTCTTaGGGAAGTTGCTCGGGTCGT +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRARETRRS*GSCSGR
Trigger: ACGACCCGAGCAACTTCCTCAAGACCGCCTTGTTTC...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCAACCATGTCCTTTTGCTaGGTGGCATTCCGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPTMSFC*VAFRRV
Trigger: GACCCTGCGGAATGCCACTCAGCAAAAGGACATGGT...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCACACGGTGTAAGTTTTaGCAGACTTATAGAGGGGCG +
Preference number: 4 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSTRCKF*QTYRGA
Trigger: CGCCCCTCTATAAGTCTGTCAAAACTTACACCGTGT...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGTCTGGGGGAGGAAACTaGGAACCCCCAATGGACAGC +
Preference number: 4 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGSGGGN*EPPMDS
Trigger: GCTGTCCATTGGGGGTTCTCAGTTTCCTCCCCCAGA...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCGCACACTTCTCTCTGTaGGTGTGCCCATCTATGTGT +
Preference number: 4 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTAHFSL*VCPSMC
Trigger: ACACATAGATGGGCACACTCACAGAGAGAAGTGTGC...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCACAGAGCTGATCATCTaGAATGCCCATGTGACGCAT +
Preference number: 4 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLTELII*NAHVTH
Trigger: ATGCGTCACATGGGCATTTCAGATGATCAGCTCTGT...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGCAAGCCAGAGGATaGGGCCGAGGCGCGACCACA +
Preference number: 4 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQRQARG*GRGATT
Trigger: TGTGGTCGCGCCTCGGCCGCATCCTCTGGCTTGCCT...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
CDS-3UTR GCA 90 bp TGGCTGAACTGTACAGATGGATGGATGATCCAGGCCAACAGCCCCACGCAAATGCCTCGAAGGGTTTCCTaGAGCTTCAGCGAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: WLNCTDGWMIQANSPTQMPRRVS*SFSEAE
Trigger: CTCCGCCTCGCTGAAGCTGCAGGAAACCCTTCGAGG...CATTTGCGTGGGGCTGTTGGCCTGGATCATCCATCCATCTGTACAGTTCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCAAAGGGCGCAAGAACTaGAGAGACAAAGCACAAAGG +
Preference number: 4 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLKGRKN*RDKAQR
Trigger: CCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTT...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp TTCAGCTCTAGTGCAGGGTGCATCCCAGCAACCGACTTAACCAGATACAGAGCTCGGAGGGAATGCAGCTaGAGCTCGAGAACTGCGGCG +
Preference number: 4 (lower is better)
Translates to: FSSSAGCIPATDLTRYRARRECS*SSRTAA
Trigger: CGCCGCAGTTCTCGAGCTCCAGCTGCATTCCCTCCG...AGCTCTGTATCTGGTTAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000345589.4
CDS-3UTR CCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGGGTAGGGAAGTGTTCTaGGTGACAACAAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRARGREVF*VTTRSP
Trigger: GGGGGACCTTGTTGTCACCCAGAACACTTCCCTACC...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGGTGGGCCCCAACACTTaGATGCCTCGAAGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGVGPNT*MPRRVS
Trigger: GGAAACCCTTCGAGGCATCCAAGTGTTGGGGCCCAC...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCAGGTTGTACGCTGTGCTaGCCACGGACACAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKAGCTLC*PRTQGG
Trigger: GCCACCCTGTGTCCGTGGCCAGCACAGCGTACAACC...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ACCCTTTATGACCTTCTTTCTAGCTCTCTGGCACAGGTAGGGCTGTCTGGGGGAGCAAAGACAGCCGGCTaGATTCTGGAGGGCCACACC +
Preference number: 4 (lower is better)
Translates to: TLYDLLSSSLAQVGLSGGAKTAG*ILEGHT
Trigger: GGTGTGGCCCTCCAGAATCCAGCCGGCTGTCTTTGC...TCCCCCAGACAGCCCTACCTGTGCCAGAGAGCTAGAAAGAAGGTCATAAAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCAACTGTACAGATGGATaGATGATCCAGGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSNCTDG*MIQANS
Trigger: GCTGTTGGCCTGGATCATCCATCCATCTGTACAGTT...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCAGCTGGACTGTACAGATaGGTGAATGGCTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPAGLYR*VNGWGQ
Trigger: CTGACCCCAGCCATTCACCCATCTGTACAGTCCAGC...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCACTGAGAACCCCCAATaGACAGCAGATGTGCCAATA +
Preference number: 4 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLTENPQ*TADVPI
Trigger: TATTGGCACATCTGCTGTCCATTGGGGGTTCTCAGT...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCCCTGTCAGGGCTGCTTaGAGGTCAAATTTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSPVRAA*RSNFLS
Trigger: TGAAAGGAAATTTGACCTCCAAGCAGCCCTGACAGG...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCAAGGGAGGGTGCAGGCTaGTTCCGCTGCTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKAREGAG*FRCSGS
Trigger: AGAGCCTGAGCAGCGGAACCAGCCTGCACCCTCCCT...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCAGGAGGCACTCAGGCTTaGGACGCCAGCACACAGTCA +
Preference number: 4 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKAGGTQA*DASTQS
Trigger: TGACTGTGTGCTGGCGTCTCAAGCCTGAGTGCCTCC...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCAACAGCCCCACGCAAATaGACCCCTCCTGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKATAPRK*TPPGQW
Trigger: CCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGT...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ACCCTTTATGACCTTCTTTCTAGCTCTCTGGCACAGGTAGGGCTGTCTGGGGGAGACTGTACAGATGGGTaGATGGCTGGGGTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: TLYDLLSSSLAQVGLSGGDCTDG*MAGVRG
Trigger: ACCCCTGACCCCAGCCATTCACCCATCTGTACAGTC...TCCCCCAGACAGCCCTACCTGTGCCAGAGAGCTAGAAAGAAGGTCATAAAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGGCAGATGTGCCAATATaGGAGGAATGGGCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGADVPI*EEWAVG
Trigger: GCCCACTGCCCATTCCTCTCATATTGGCACATCTGC...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ACCCTTTATGACCTTCTTTCTAGCTCTCTGGCACAGGTAGGGCTGTCTGGGGGATCTGGGGGAGGAAACTaGGAACCCCCAATGGACAGC +
Preference number: 4 (lower is better)
Translates to: TLYDLLSSSLAQVGLSGGSGGGN*EPPMDS
Trigger: GCTGTCCATTGGGGGTTCTCAGTTTCCTCCCCCAGA...TCCCCCAGACAGCCCTACCTGTGCCAGAGAGCTAGAAAGAAGGTCATAAAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCAGGCCTTTTCCTCAGTaGAAGTTTCACAGATGGGTT +
Preference number: 4 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLRPFPQ*KFHRWV
Trigger: AACCCATCTGTGAAACTTTCACTGAGGAAAAGGCCT...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCAGGTGGGTGGATCACCTaGGGTCAGGCGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKAGGWIT*GQAFET
Trigger: GGTCTCAAACGCCTGACCTCAGGTGATCCACCCACC...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450876.5
CDS-3UTR GCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGGGTGGGGAGGGGGAGTaGTCACACGGTGTAAGTTTT +
Preference number: 4 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGGGEGE*SHGVSF
Trigger: AAAACTTACACCGTGTGAGCACTCCCCCTCCCCACC...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCTGTGGTGTGTGTACATaGACACTTCTCTCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLCGVCT*TLLSVS
Trigger: ACTCACAGAGAGAAGTGTGCATGTACACACACCACA...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCAAGCTCTAGTGCAGGGTaGATCCCAGCAACCGACTTA +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPSSSAG*IPATDL
Trigger: TAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCT...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCAAAGGGCGCAAGAACTaGAGAGACAAAGCACAAAGG +
Preference number: 4 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTKGRKN*RDKAQR
Trigger: CCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTT...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp TGGCTGAACTGTACAGATGGATGGATGATCCAGGCCAACAGCCCCACGCAAATGTTCGCACCATTCTCCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: WLNCTDGWMIQANSPTQMFAPFS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGGAGAATGGTGCGAA...CATTTGCGTGGGGCTGTTGGCCTGGATCATCCATCCATCTGTACAGTTCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCAGCAGGCTGGTTCCGCTaGTCAGGCTCTGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKAAGWFR*SGSVIL
Trigger: CAGGATGACAGAGCCTGAGCAGCGGAACCAGCCTGC...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGACCTCACACGTTCGCTaGTTTGGCCCACATCACGTA +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRARTSHVR*FGPHHV
Trigger: TACGTGATGTGGGCCAAAGCAGCGAACGTGTGAGGT...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450876.5
CDS-3UTR CCA 90 bp ACCCTTTATGACCTTCTTTCTAGCTCTCTGGCACAGGTAGGGCTGTCTGGGGGATCTTCAGTCACCATCTaGGTCCCGTCCCCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: TLYDLLSSSLAQVGLSGGSSVTI*VPSPKS
Trigger: GGACTTCGGGGACGGGACCCAGATGGTGACTGAAGA...TCCCCCAGACAGCCCTACCTGTGCCAGAGAGCTAGAAAGAAGGTCATAAAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGAGGTCTGAATTAGGGTaGGCCCCAACACTTGGATGC +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRARRSELG*APTLGC
Trigger: GCATCCAAGTGTTGGGGCCCACCCTAATTCAGACCT...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCGATAAGTGTAGCACATaGGAAAGCAAAGACAGCCGG +
Preference number: 4 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTDKCST*ESKDSR
Trigger: CCGGCTGTCTTTGCTTTCCCATGTGCTACACTTATC...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAACCTGACCCCAGAGGGTaGCTCCGGGTTCTCCACCAT +
Preference number: 4 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQPDPRG*LRVLHH
Trigger: ATGGTGGAGAACCCGGAGCCACCCTCTGGGGTCAGG...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000450876.5
CDS-3UTR CCA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCTTCCAGGTACTCAGATaGAGTCTCCAGCAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTFQVLR*SLQQER
Trigger: CCTTTCTTGCTGGAGACTCCATCTGAGTACCTGGAA...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGTGCACACCACCCTGCTaGAAACTCCAAGTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRARCTPPC*KLQVSS
Trigger: ACTGCTGACTTGGAGTTTCCAGCAGGGTGGTGTGCA...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAACCCCTCCTGGTCAGTaGTGCACACCACCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQTPPGQ*CTPPCW
Trigger: CCAGCAGGGTGGTGTGCACCACTGACCAGGAGGGGT...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGGTACAGATGGGTGAATaGCTGGGGTCAGGGGTGACA +
Preference number: 4 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGVQMGE*LGSGVT
Trigger: TGTCACCCCTGACCCCAGCCATTCACCCATCTGTAC...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGGCTGGACTGTACAGATaGGTGAATGGCTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGAGLYR*VNGWGQ
Trigger: CTGACCCCAGCCATTCACCCATCTGTACAGTCCAGC...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp TGGCTGAACTGTACAGATGGATGGATGATCCAGGCCAACAGCCCCACGCAAATGGGGGTGGTAACCGAGTaGGGCTTATGTCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: WLNCTDGWMIQANSPTQMGVVTE*GLCQWL
Trigger: CAGCCACTGACATAAGCCCCACTCGGTTACCACCCC...CATTTGCGTGGGGCTGTTGGCCTGGATCATCCATCCATCTGTACAGTTCAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ACCCTTTATGACCTTCTTTCTAGCTCTCTGGCACAGGTAGGGCTGTCTGGGGGAGGGGTGGTAACCGAGTaGGGCTTATGTCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: TLYDLLSSSLAQVGLSGGGVVTE*GLCQWL
Trigger: CAGCCACTGACATAAGCCCCACTCGGTTACCACCCC...TCCCCCAGACAGCCCTACCTGTGCCAGAGAGCTAGAAAGAAGGTCATAAAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCCCTGTCAGGGCTGCTTaGAGGTCAAATTTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTPVRAA*RSNFLS
Trigger: TGAAAGGAAATTTGACCTCCAAGCAGCCCTGACAGG...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGGGCTCCGGCTACTTCTaGCCTCATTATTGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRARGSGYF*PHYCLS
Trigger: GCTGAGACAATAATGAGGCCAGAAGTAGCCGGAGCC...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp TTCAGCTCTAGTGCAGGGTGCATCCCAGCAACCGACTTAACCAGATACAGAGCTCACGGATGGTGGAGCTaGGACCCTTCTCCATCTTGC +
Preference number: 4 (lower is better)
Translates to: FSSSAGCIPATDLTRYRAHGWWS*DPSPSC
Trigger: GCAAGATGGAGAAGGGTCTCAGCTCCACCATCCGTG...AGCTCTGTATCTGGTTAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGATCTTTTGGAAGGTCTaGATTAGGGTGGGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRARIFWKV*IRVGPN
Trigger: GTTGGGGCCCACCCTAATTCAGACCTTCCAAAAGAT...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCTGGATCTTGTGGTACTaGTGTGTCTTGCTGATGATA +
Preference number: 4 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLWILWY*CVLLMI
Trigger: TATCATCAGCAAGACACATCAGTACCACAAGATCCA...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ACCCTTTATGACCTTCTTTCTAGCTCTCTGGCACAGGTAGGGCTGTCTGGGGGAACCATGTCCTTTTGCTaGGTGGCATTCCGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: TLYDLLSSSLAQVGLSGGTMSFC*VAFRRV
Trigger: GACCCTGCGGAATGCCACTCAGCAAAAGGACATGGT...TCCCCCAGACAGCCCTACCTGTGCCAGAGAGCTAGAAAGAAGGTCATAAAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCAGACTGTACAGATGGGTaGATGGCTGGGGTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKADCTDG*MAGVRG
Trigger: ACCCCTGACCCCAGCCATTCACCCATCTGTACAGTC...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp TTCAGCTCTAGTGCAGGGTGCATCCCAGCAACCGACTTAACCAGATACAGAGCTGACTGTACAGATGGGTaGATGGCTGGGGTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: FSSSAGCIPATDLTRYRADCTDG*MAGVRG
Trigger: ACCCCTGACCCCAGCCATTCACCCATCTGTACAGTC...AGCTCTGTATCTGGTTAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCATCTGGGGGAGGAAACTaGGAACCCCCAATGGACAGC +
Preference number: 4 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKASGGGN*EPPMDS
Trigger: GCTGTCCATTGGGGGTTCTCAGTTTCCTCCCCCAGA...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCAGCACACTTCTCTCTGTaGGTGTGCCCATCTATGTGT +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPAHFSL*VCPSMC
Trigger: ACACATAGATGGGCACACTCACAGAGAGAAGTGTGC...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAACGGACGCGGAGGGAATaGAGCTGGAGCTCGAGAACT +
Preference number: 4 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQRTRRE*SWSSRT
Trigger: AGTTCTCGAGCTCCAGCTGCATTCCCTCCGCGTCCG...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000345589.4
CDS-3UTR GCA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGAAGAACCTGTCAGGGCTaGTTGGAGGTCAAATTTCCT +
Preference number: 4 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARRTCQG*LEVKFP
Trigger: AGGAAATTTGACCTCCAAGCAGCCCTGACAGGTTCT...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGAAAAGGGCGCAAGAACTaGAGAGACAAAGCACAAAGG +
Preference number: 4 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARKGRKN*RDKAQR
Trigger: CCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTT...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGAACCTCTTCTACCGCTaGAAGGCCTTTTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRARNLFYR*KAFSSV
Trigger: CACTGAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTT...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGTGTCCTTTTGCTGAGTaGCATTCCGCAGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRARCPFAE*HSAGSC
Trigger: ACATGACCCTGCGGAATGCCACTCAGCAAAAGGACA...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCATGTCCTTTTGCTGAGTaGCATTCCGCAGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPCPFAE*HSAGSC
Trigger: ACATGACCCTGCGGAATGCCACTCAGCAAAAGGACA...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp TTCAGCTCTAGTGCAGGGTGCATCCCAGCAACCGACTTAACCAGATACAGAGCTGGCGGGAGCAGCCCGTaGTTCTCACGAACAATTTCC +
Preference number: 4 (lower is better)
Translates to: FSSSAGCIPATDLTRYRAGGSSP*FSRTIS
Trigger: GGAAATTGTTCGTGAGAACCACGGGCTGCTCCCGCC...AGCTCTGTATCTGGTTAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCAGGCGGGAGCAGCCCGTaGTTCTCACGAACAATTTCC +
Preference number: 4 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKAGGSSP*FSRTIS
Trigger: GGAAATTGTTCGTGAGAACCACGGGCTGCTCCCGCC...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp TGGCTGAACTGTACAGATGGATGGATGATCCAGGCCAACAGCCCCACGCAAATGAGAGGGAGGGGCTTGTaGCAGTGGCTGAACTGTACA +
Preference number: 4 (lower is better)
Translates to: WLNCTDGWMIQANSPTQMRGRGL*QWLNCT
Trigger: TGTACAGTTCAGCCACTGCCACAAGCCCCTCCCTCT...CATTTGCGTGGGGCTGTTGGCCTGGATCATCCATCCATCTGTACAGTTCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ACCCTTTATGACCTTCTTTCTAGCTCTCTGGCACAGGTAGGGCTGTCTGGGGGAGCTGGACTGTACAGATaGGTGAATGGCTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: TLYDLLSSSLAQVGLSGGAGLYR*VNGWGQ
Trigger: CTGACCCCAGCCATTCACCCATCTGTACAGTCCAGC...TCCCCCAGACAGCCCTACCTGTGCCAGAGAGCTAGAAAGAAGGTCATAAAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCAGAAACAAGGCGGTCTTaGGGAAGTTGCTCGGGTCGT +
Preference number: 4 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKAETRRS*GSCSGR
Trigger: ACGACCCGAGCAACTTCCTCAAGACCGCCTTGTTTC...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGATCTTTTGGAAGGTCTaGATTAGGGTGGGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGIFWKV*IRVGPN
Trigger: GTTGGGGCCCACCCTAATTCAGACCTTCCAAAAGAT...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp TTCAGCTCTAGTGCAGGGTGCATCCCAGCAACCGACTTAACCAGATACAGAGCTACCATGTCCTTTTGCTaGGTGGCATTCCGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: FSSSAGCIPATDLTRYRATMSFC*VAFRRV
Trigger: GACCCTGCGGAATGCCACTCAGCAAAAGGACATGGT...AGCTCTGTATCTGGTTAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGACACGGTGTAAGTTTTaGCAGACTTATAGAGGGGCG +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRARTRCKF*QTYRGA
Trigger: CGCCCCTCTATAAGTCTGTCAAAACTTACACCGTGT...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGACAGAGCTGATCATCTaGAATGCCCATGTGACGCAT +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRARTELII*NAHVTH
Trigger: ATGCGTCACATGGGCATTTCAGATGATCAGCTCTGT...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCAGCCCCAACACTTGGATaGCTCGAAGGGTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKAAPTLG*LEGFPA
Trigger: TGCAGGAAACCCTTCGAGGCATCCAAGTGTTGGGGC...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp TTCAGCTCTAGTGCAGGGTGCATCCCAGCAACCGACTTAACCAGATACAGAGCTGGTGGGGAGGGGGAGTaGTCACACGGTGTAAGTTTT +
Preference number: 4 (lower is better)
Translates to: FSSSAGCIPATDLTRYRAGGEGE*SHGVSF
Trigger: AAAACTTACACCGTGTGAGCACTCCCCCTCCCCACC...AGCTCTGTATCTGGTTAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp TTCAGCTCTAGTGCAGGGTGCATCCCAGCAACCGACTTAACCAGATACAGAGCTTGGTGCACACCACCCTaGTGGAAACTCCAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: FSSSAGCIPATDLTRYRAWCTPP*WKLQVS
Trigger: GCTGACTTGGAGTTTCCAGCAGGGTGGTGTGCACCA...AGCTCTGTATCTGGTTAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAACCTCCTGGTCAGTGGTaGACACCACCCTGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQPPGQW*TPPCWK
Trigger: TTTCCAGCAGGGTGGTGTGCACCACTGACCAGGAGG...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp TGGCTGAACTGTACAGATGGATGGATGATCCAGGCCAACAGCCCCACGCAAATGAGCTCTAGTGCAGGGTaGATCCCAGCAACCGACTTA +
Preference number: 4 (lower is better)
Translates to: WLNCTDGWMIQANSPTQMSSSAG*IPATDL
Trigger: TAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCT...CATTTGCGTGGGGCTGTTGGCCTGGATCATCCATCCATCTGTACAGTTCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCAAGAACCTGTCAGGGCTaGTTGGAGGTCAAATTTCCT +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPRTCQG*LEVKFP
Trigger: AGGAAATTTGACCTCCAAGCAGCCCTGACAGGTTCT...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGAACCTCTTCTACCGCTaGAAGGCCTTTTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGNLFYR*KAFSSV
Trigger: CACTGAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTT...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ACCCTTTATGACCTTCTTTCTAGCTCTCTGGCACAGGTAGGGCTGTCTGGGGGAAGGTCTGAATTAGGGTaGGCCCCAACACTTGGATGC +
Preference number: 4 (lower is better)
Translates to: TLYDLLSSSLAQVGLSGGRSELG*APTLGC
Trigger: GCATCCAAGTGTTGGGGCCCACCCTAATTCAGACCT...TCCCCCAGACAGCCCTACCTGTGCCAGAGAGCTAGAAAGAAGGTCATAAAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAGGGTCCCTGAAGGTGTaGGTCAGGTTGTACGCTGTG +
Preference number: 4 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQGSLKV*VRLYAV
Trigger: CACAGCGTACAACCTGACCCACACCTTCAGGGACCC...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp TTCAGCTCTAGTGCAGGGTGCATCCCAGCAACCGACTTAACCAGATACAGAGCTCAAATGAACCCCTCCTaGTCAGTGGTGCACACCACC +
Preference number: 4 (lower is better)
Translates to: FSSSAGCIPATDLTRYRAQMNPS*SVVHTT
Trigger: GGTGGTGTGCACCACTGACCAGGAGGGGTTCATTTG...AGCTCTGTATCTGGTTAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCAGCTGAACTGTACAGATaGATGGATGATCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPAELYR*MDDPGQ
Trigger: TTGGCCTGGATCATCCATCCATCTGTACAGTTCAGC...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp TTCAGCTCTAGTGCAGGGTGCATCCCAGCAACCGACTTAACCAGATACAGAGCTAGAGGGAGGGGCTTGTaGCAGTGGCTGAACTGTACA +
Preference number: 4 (lower is better)
Translates to: FSSSAGCIPATDLTRYRARGRGL*QWLNCT
Trigger: TGTACAGTTCAGCCACTGCCACAAGCCCCTCCCTCT...AGCTCTGTATCTGGTTAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCAACTGAGAACCCCCAATaGACAGCAGATGTGCCAATA +
Preference number: 4 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPTENPQ*TADVPI
Trigger: TATTGGCACATCTGCTGTCCATTGGGGGTTCTCAGT...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp TGGCTGAACTGTACAGATGGATGGATGATCCAGGCCAACAGCCCCACGCAAATGCAGCAGGGACTAGGATaGCCTTATAAAGGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: WLNCTDGWMIQANSPTQMQQGLG*PYKGRK
Trigger: CTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG...CATTTGCGTGGGGCTGTTGGCCTGGATCATCCATCCATCTGTACAGTTCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAACTGGCCTTCTGGCGATaGGGATGTGGGGACAGTAGA +
Preference number: 4 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQLAFWR*GCGDSR
Trigger: TCTACTGTCCCCACATCCCCATCGCCAGAAGGCCAG...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450876.5
CDS-3UTR TCA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTTCTGGCAGCAGCACCTaGCCCCAGAGGGTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: FHENELHNSVNAIFCTQPSGSST*PQRVAP
Trigger: CGGAGCCACCCTCTGGGGTCAGGTGCTGCTGCCAGA...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAGCAGATGTGCCAATATaGGAGGAATGGGCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQADVPI*EEWAVG
Trigger: GCCCACTGCCCATTCCTCTCATATTGGCACATCTGC...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGAGGCCTTTTCCTCAGTaGAAGTTTCACAGATGGGTT +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRARRPFPQ*KFHRWV
Trigger: AACCCATCTGTGAAACTTTCACTGAGGAAAAGGCCT...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTCCCCATCCAGCCCCCTaGCAGCCAGCAGGGACTAGG +
Preference number: 4 (lower is better)
Translates to: FHENELHNSVNAIFCTQPPHPAP*QPAGTR
Trigger: CCTAGTCCCTGCTGGCTGGCAGGGGGCTGGATGGGG...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAGGTAGGGAAGTGTTCTaGGTGACAACAAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQGREVF*VTTRSP
Trigger: GGGGGACCTTGTTGTCACCCAGAACACTTCCCTACC...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGGATAAGTGTAGCACATaGGAAAGCAAAGACAGCCGG +
Preference number: 4 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGDKCST*ESKDSR
Trigger: CCGGCTGTCTTTGCTTTCCCATGTGCTACACTTATC...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCATGCACACCACCCTGCTaGAAACTCCAAGTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKACTPPC*KLQVSS
Trigger: ACTGCTGACTTGGAGTTTCCAGCAGGGTGGTGTGCA...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGAACTGTACAGATGGATaGATGATCCAGGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGNCTDG*MIQANS
Trigger: GCTGTTGGCCTGGATCATCCATCCATCTGTACAGTT...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAGTACAGATGGGTGAATaGCTGGGGTCAGGGGTGACA +
Preference number: 4 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQVQMGE*LGSGVT
Trigger: TGTCACCCCTGACCCCAGCCATTCACCCATCTGTAC...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGACTGAGAACCCCCAATaGACAGCAGATGTGCCAATA +
Preference number: 4 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGTENPQ*TADVPI
Trigger: TATTGGCACATCTGCTGTCCATTGGGGGTTCTCAGT...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAGCAGGGACTAGGATaGCCTTATAAAGGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKAQQGLG*PYKGRK
Trigger: CTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCATTTCTGCACACAGCCTaGGAGCAGATGGTTACAGCG +
Preference number: 4 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKAFLHTA*EQMVTA
Trigger: CGCTGTAACCATCTGCTCCCAGGCTGTGTGCAGAAA...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp TTCAGCTCTAGTGCAGGGTGCATCCCAGCAACCGACTTAACCAGATACAGAGCTTTTCTGCACACAGCCTaGGAGCAGATGGTTACAGCG +
Preference number: 4 (lower is better)
Translates to: FSSSAGCIPATDLTRYRAFLHTA*EQMVTA
Trigger: CGCTGTAACCATCTGCTCCCAGGCTGTGTGCAGAAA...AGCTCTGTATCTGGTTAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ACCCTTTATGACCTTCTTTCTAGCTCTCTGGCACAGGTAGGGCTGTCTGGGGGAACAGAGCTGATCATCTaGAATGCCCATGTGACGCAT +
Preference number: 4 (lower is better)
Translates to: TLYDLLSSSLAQVGLSGGTELII*NAHVTH
Trigger: ATGCGTCACATGGGCATTTCAGATGATCAGCTCTGT...TCCCCCAGACAGCCCTACCTGTGCCAGAGAGCTAGAAAGAAGGTCATAAAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGAGGCCTTTTCCTCAGTaGAAGTTTCACAGATGGGTT +
Preference number: 4 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGRPFPQ*KFHRWV
Trigger: AACCCATCTGTGAAACTTTCACTGAGGAAAAGGCCT...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTTGGTCCCCAGACATCTaGCGGATGCGTGGGCCACCC +
Preference number: 4 (lower is better)
Translates to: FHENELHNSVNAIFCTQPWSPDI*RMRGPP
Trigger: GGGTGGCCCACGCATCCGTCAGATGTCTGGGGACCA...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450876.5
CDS-3UTR GCA 90 bp TGGCTGAACTGTACAGATGGATGGATGATCCAGGCCAACAGCCCCACGCAAATGCAAGCATCAAAGTCCTaGACGAAGCCTCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: WLNCTDGWMIQANSPTQMQASKS*TKPLQR
Trigger: CCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTG...CATTTGCGTGGGGCTGTTGGCCTGGATCATCCATCCATCTGTACAGTTCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp ACCCTTTATGACCTTCTTTCTAGCTCTCTGGCACAGGTAGGGCTGTCTGGGGGACAAGCATCAAAGTCCTaGACGAAGCCTCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: TLYDLLSSSLAQVGLSGGQASKS*TKPLQR
Trigger: CCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTG...TCCCCCAGACAGCCCTACCTGTGCCAGAGAGCTAGAAAGAAGGTCATAAAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGTGTGGTGTGTGTACATaGACACTTCTCTCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGCGVCT*TLLSVS
Trigger: ACTCACAGAGAGAAGTGTGCATGTACACACACCACA...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp TTCAGCTCTAGTGCAGGGTGCATCCCAGCAACCGACTTAACCAGATACAGAGCTAACCTCTTCTACCGCTaGAAGGCCTTTTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: FSSSAGCIPATDLTRYRANLFYR*KAFSSV
Trigger: CACTGAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTT...AGCTCTGTATCTGGTTAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTCCTTGGCCACCAGGCTaGCCGAGATGGTCACCACCG +
Preference number: 4 (lower is better)
Translates to: FHENELHNSVNAIFCTQPPWPPG*PRWSPP
Trigger: CGGTGGTGACCATCTCGGCCAGCCTGGTGGCCAAGG...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTGCCACGGACACAGGGTaGCACTCCCCTTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FHENELHNSVNAIFCTQPATDTG*HSPSSS
Trigger: GCTGGAGGAAGGGGAGTGCCACCCTGTGTCCGTGGC...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp TGGCTGAACTGTACAGATGGATGGATGATCCAGGCCAACAGCCCCACGCAAATGGATAAGTGTAGCACATaGGAAAGCAAAGACAGCCGG +
Preference number: 4 (lower is better)
Translates to: WLNCTDGWMIQANSPTQMDKCST*ESKDSR
Trigger: CCGGCTGTCTTTGCTTTCCCATGTGCTACACTTATC...CATTTGCGTGGGGCTGTTGGCCTGGATCATCCATCCATCTGTACAGTTCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp ACCCTTTATGACCTTCTTTCTAGCTCTCTGGCACAGGTAGGGCTGTCTGGGGGATTCCAGGTACTCAGATaGAGTCTCCAGCAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: TLYDLLSSSLAQVGLSGGFQVLR*SLQQER
Trigger: CCTTTCTTGCTGGAGACTCCATCTGAGTACCTGGAA...TCCCCCAGACAGCCCTACCTGTGCCAGAGAGCTAGAAAGAAGGTCATAAAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp TGGCTGAACTGTACAGATGGATGGATGATCCAGGCCAACAGCCCCACGCAAATGTTCCAGGTACTCAGATaGAGTCTCCAGCAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: WLNCTDGWMIQANSPTQMFQVLR*SLQQER
Trigger: CCTTTCTTGCTGGAGACTCCATCTGAGTACCTGGAA...CATTTGCGTGGGGCTGTTGGCCTGGATCATCCATCCATCTGTACAGTTCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp TGGCTGAACTGTACAGATGGATGGATGATCCAGGCCAACAGCCCCACGCAAATGAACTGTACAGATGGATaGATGATCCAGGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: WLNCTDGWMIQANSPTQMNCTDG*MIQANS
Trigger: GCTGTTGGCCTGGATCATCCATCCATCTGTACAGTT...CATTTGCGTGGGGCTGTTGGCCTGGATCATCCATCCATCTGTACAGTTCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp TGGCTGAACTGTACAGATGGATGGATGATCCAGGCCAACAGCCCCACGCAAATGCCTGTCAGGGCTGCTTaGAGGTCAAATTTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: WLNCTDGWMIQANSPTQMPVRAA*RSNFLS
Trigger: TGAAAGGAAATTTGACCTCCAAGCAGCCCTGACAGG...CATTTGCGTGGGGCTGTTGGCCTGGATCATCCATCCATCTGTACAGTTCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAACAGCAGGGACTAGGATaGCCTTATAAAGGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQQQGLG*PYKGRK
Trigger: CTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAATCTTTTGGAAGGTCTaGATTAGGGTGGGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQIFWKV*IRVGPN
Trigger: GTTGGGGCCCACCCTAATTCAGACCTTCCAAAAGAT...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGTGGATCTTGTGGTACTaGTGTGTCTTGCTGATGATA +
Preference number: 4 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGWILWY*CVLLMI
Trigger: TATCATCAGCAAGACACATCAGTACCACAAGATCCA...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGTCTGAAATGCCCATGTaGCGCATGTGTTTATATTTC +
Preference number: 4 (lower is better)
Translates to: GLIKGARTAETKHKGRARSEMPM*RMCLYF
Trigger: GAAATATAAACACATGCGTCACATGGGCATTTCAGA...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp ACCCTTTATGACCTTCTTTCTAGCTCTCTGGCACAGGTAGGGCTGTCTGGGGGATGTGGTGTGTGTACATaGACACTTCTCTCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: TLYDLLSSSLAQVGLSGGCGVCT*TLLSVS
Trigger: ACTCACAGAGAGAAGTGTGCATGTACACACACCACA...TCCCCCAGACAGCCCTACCTGTGCCAGAGAGCTAGAAAGAAGGTCATAAAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCAAGAACCTGTCAGGGCTaGTTGGAGGTCAAATTTCCT +
Preference number: 4 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKARTCQG*LEVKFP
Trigger: AGGAAATTTGACCTCCAAGCAGCCCTGACAGGTTCT...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCAAAAGGGCGCAAGAACTaGAGAGACAAAGCACAAAGG +
Preference number: 4 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKAKGRKN*RDKAQR
Trigger: CCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTT...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp TTCAGCTCTAGTGCAGGGTGCATCCCAGCAACCGACTTAACCAGATACAGAGCTGCTGAACTGTACAGATaGATGGATGATCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: FSSSAGCIPATDLTRYRAAELYR*MDDPGQ
Trigger: TTGGCCTGGATCATCCATCCATCTGTACAGTTCAGC...AGCTCTGTATCTGGTTAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTAGTCCCCAGGGTCCCTaGAGGTGTGGGTCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: FHENELHNSVNAIFCTQPSPQGP*RCGSGC
Trigger: ACAACCTGACCCACACCTTCAGGGACCCTGGGGACT...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAACACGGTGTAAGTTTTaGCAGACTTATAGAGGGGCG +
Preference number: 4 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQTRCKF*QTYRGA
Trigger: CGCCCCTCTATAAGTCTGTCAAAACTTACACCGTGT...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCAAACCAGATACAGAGCTaGTCATCTGAAATGCCCATG +
Preference number: 4 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKANQIQS*SSEMPM
Trigger: CATGGGCATTTCAGATGATCAGCTCTGTATCTGGTT...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTCCTCGAAGGGTTTCCTaGAGCTTCAGCGAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: FHENELHNSVNAIFCTQPPRRVS*SFSEAE
Trigger: CTCCGCCTCGCTGAAGCTGCAGGAAACCCTTCGAGG...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp TTCAGCTCTAGTGCAGGGTGCATCCCAGCAACCGACTTAACCAGATACAGAGCTTGTGGTGTGTGTACATaGACACTTCTCTCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: FSSSAGCIPATDLTRYRACGVCT*TLLSVS
Trigger: ACTCACAGAGAGAAGTGTGCATGTACACACACCACA...AGCTCTGTATCTGGTTAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTGCTGGCAGGCAAGAATaGCCCCCTCACACACAGGGA +
Preference number: 4 (lower is better)
Translates to: FHENELHNSVNAIFCTQPAGRQE*PPHTQG
Trigger: TCCCTGTGTGTGAGGGGGGCATTCTTGCCTGCCAGC...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CTTGGCTATATTCAGAGCACACAAGCTTTATTTAGCAACAATGGCAGTATTTCATCTCGGCCCGGATGCTaGAGCAGTAGTCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LGYIQSTQALFSNNGSISSRPGC*SSSPQG
Trigger: ACCCTGGGGACTACTGCTTCAGCATCCGGGCCGAGA...TGAAATACTGCCATTGTTGCTAAATAAAGCTTGTGTGCTCTGAATATAGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000416379.6
CDS-3UTR TCA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAACCAGATACAGAGCTaGTCATCTGAAATGCCCATG +
Preference number: 4 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQNQIQS*SSEMPM
Trigger: CATGGGCATTTCAGATGATCAGCTCTGTATCTGGTT...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTTTCGCACCATTCTCCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: FHENELHNSVNAIFCTQPFAPFS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGGAGAATGGTGCGAA...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CTTGGCTATATTCAGAGCACACAAGCTTTATTTAGCAACAATGGCAGTATTTCAGGTTGTACGCTGTGCTaGCCACGGACACAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LGYIQSTQALFSNNGSISGCTLC*PRTQGG
Trigger: GCCACCCTGTGTCCGTGGCCAGCACAGCGTACAACC...TGAAATACTGCCATTGTTGCTAAATAAAGCTTGTGTGCTCTGAATATAGCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000416379.6
CDS-3UTR CCA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTCAGCCTGGGAGCAGATaGTTACAGCGACAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: FHENELHNSVNAIFCTQPQPGSR*LQRQSP
Trigger: TGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR TCA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAATGGATCTTGTGGTACTaGTGTGTCTTGCTGATGATA +
Preference number: 4 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQWILWY*CVLLMI
Trigger: TATCATCAGCAAGACACATCAGTACCACAAGATCCA...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CTTGGCTATATTCAGAGCACACAAGCTTTATTTAGCAACAATGGCAGTATTTCAGCTGGCAGGCAAGAATaGCCCCCTCACACACAGGGA +
Preference number: 4 (lower is better)
Translates to: LGYIQSTQALFSNNGSISAGRQE*PPHTQG
Trigger: TCCCTGTGTGTGAGGGGGGCATTCTTGCCTGCCAGC...TGAAATACTGCCATTGTTGCTAAATAAAGCTTGTGTGCTCTGAATATAGCCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000416379.6
CDS-3UTR GCA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTTGTGGGGACAGTAGATaGACGACCGAGTGGGCACAA +
Preference number: 4 (lower is better)
Translates to: FHENELHNSVNAIFCTQPCGDSR*TTEWAQ
Trigger: TTGTGCCCACTCGGTCGTGCATCTACTGTCCCCACA...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450876.5
CDS-3UTR CCA 90 bp CTTGGCTATATTCAGAGCACACAAGCTTTATTTAGCAACAATGGCAGTATTTCAGCTTCACAGCCCTCGTaGCATCCGGCTCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: LGYIQSTQALFSNNGSISASQPS*HPAPPL
Trigger: AAGAGGTGGAGCCGGATGCCACGAGGGCTGTGAAGC...TGAAATACTGCCATTGTTGCTAAATAAAGCTTGTGTGCTCTGAATATAGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000416379.6
CDS-3UTR CCA 90 bp CTTGGCTATATTCAGAGCACACAAGCTTTATTTAGCAACAATGGCAGTATTTCACAGCCGGCTGGATTCTaGAGGGCCACACCTGGATCT +
Preference number: 4 (lower is better)
Translates to: LGYIQSTQALFSNNGSISQPAGF*RATPGS
Trigger: AGATCCAGGTGTGGCCCTCCAGAATCCAGCCGGCTG...TGAAATACTGCCATTGTTGCTAAATAAAGCTTGTGTGCTCTGAATATAGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000416379.6
CDS-3UTR TCA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAATCTGAAATGCCCATGTaGCGCATGTGTTTATATTTC +
Preference number: 4 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQSEMPM*RMCLYF
Trigger: GAAATATAAACACATGCGTCACATGGGCATTTCAGA...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CTTGGCTATATTCAGAGCACACAAGCTTTATTTAGCAACAATGGCAGTATTTCATCAGGTTGTACGCTGTaGTGGCCACGGACACAGGGT +
Preference number: 4 (lower is better)
Translates to: LGYIQSTQALFSNNGSISSGCTL*WPRTQG
Trigger: ACCCTGTGTCCGTGGCCAGCACAGCGTACAACCTGA...TGAAATACTGCCATTGTTGCTAAATAAAGCTTGTGTGCTCTGAATATAGCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000416379.6
CDS-3UTR TCA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTGCACACTTCTCTCTGTaGGTGTGCCCATCTATGTGT +
Preference number: 4 (lower is better)
Translates to: FHENELHNSVNAIFCTQPAHFSL*VCPSMC
Trigger: ACACATAGATGGGCACACTCACAGAGAGAAGTGTGC...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CCA 90 bp CTTGGCTATATTCAGAGCACACAAGCTTTATTTAGCAACAATGGCAGTATTTCAGCTGGACTGTACAGATaGGTGAATGGCTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LGYIQSTQALFSNNGSISAGLYR*VNGWGQ
Trigger: CTGACCCCAGCCATTCACCCATCTGTACAGTCCAGC...TGAAATACTGCCATTGTTGCTAAATAAAGCTTGTGTGCTCTGAATATAGCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000416379.6
CDS-3UTR GCA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTAGAACCTGTCAGGGCTaGTTGGAGGTCAAATTTCCT +
Preference number: 4 (lower is better)
Translates to: FHENELHNSVNAIFCTQPRTCQG*LEVKFP
Trigger: AGGAAATTTGACCTCCAAGCAGCCCTGACAGGTTCT...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR GCA 90 bp CTTGGCTATATTCAGAGCACACAAGCTTTATTTAGCAACAATGGCAGTATTTCACAAGCATCAAAGTCCTaGACGAAGCCTCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LGYIQSTQALFSNNGSISQASKS*TKPLQR
Trigger: CCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTG...TGAAATACTGCCATTGTTGCTAAATAAAGCTTGTGTGCTCTGAATATAGCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000416379.6
CDS-3UTR TCA 90 bp CTTGGCTATATTCAGAGCACACAAGCTTTATTTAGCAACAATGGCAGTATTTCATGGATCTTGTGGTACTaGTGTGTCTTGCTGATGATA +
Preference number: 4 (lower is better)
Translates to: LGYIQSTQALFSNNGSISWILWY*CVLLMI
Trigger: TATCATCAGCAAGACACATCAGTACCACAAGATCCA...TGAAATACTGCCATTGTTGCTAAATAAAGCTTGTGTGCTCTGAATATAGCCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000416379.6
CDS CCA 90 bp GCCCGGAGCGGGAGAAGCGTGGGGCGGACGCGGAGGGAATGCAGCTaGAGCTCGAGAACTGCGGCGGTCGCTCCTCCGGGCGCGCAGCGC +
Preference number: 5 (lower is better)
Translates to: ARSGRSVGRTRRECS*SSRTAAVAPPGAQR
Trigger: GCGCTGCGCGCCCGGAGGAGCGACCGCCGCAGTTCTCGAGCTCCAGCTGCATTCCCTCCGCGTCCGCCCCACGCTTCTCCCGCTCCGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000461092.1
CDS CCA 90 bp CGTCAGCGGGCAGGGCCAGGCTGCCGTTGTCCTTGGCCACCAGGCTaGCCGAGATGGTCACCACCGCTCCCGTGGTGGCAGGGCTATCGG +
Preference number: 5 (lower is better)
Translates to: RQRAGPGCRCPWPPG*PRWSPPLPWWQGYR
Trigger: CCGATAGCCCTGCCACCACGGGAGCGGTGGTGACCATCTCGGCCAGCCTGGTGGCCAAGGACAACGGCAGCCTGGCCCTGCCCGCTGACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000445790.1
ENST00000450876.5
ENST00000486839.5
CDS GCA 90 bp TCCAGTGGAAGCGGTAGAGGTGGGCGTCAGCGGGCAGGGCCAGGCTaGCGTTGTCCTTGGCCACCAGGCTGGCCGAGATGGTCACCACCG +
Preference number: 5 (lower is better)
Translates to: SSGSGRGGRQRAGPG*RCPWPPGWPRWSPP
Trigger: CGGTGGTGACCATCTCGGCCAGCCTGGTGGCCAAGGACAACGGCAGCCTGGCCCTGCCCGCTGACGCCCACCTCTACCGCTTCCACTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000445790.1
ENST00000450876.5
ENST00000486839.5
CDS TCA 90 bp CAAAGCCCCTGGCCACAGGCTGGCACATCCAGCAGTCAGCGGCAGTaGCCCAGACAGAGACCGGGAATTCCCCGGGCACGTGGCCGACCA +
Preference number: 5 (lower is better)
Translates to: QSPWPQAGTSSSQRQ*PRQRPGIPRARGRP
Trigger: TGGTCGGCCACGTGCCCGGGGAATTCCCGGTCTCTGTCTGGGTCACTGCCGCTGACTGCTGGATGTGCCAGCCTGTGGCCAGGGGCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000445790.1
ENST00000450876.5
ENST00000486839.5
CDS-3UTR CAA 90 bp CAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCCCCACCGCGCCCGGCCTaGACTCAACCTCTTCTACCG +
Preference number: 5 (lower is better)
Translates to: QPGSRWLQRQSPDPTVLPPPRPA*TQPLLP
Trigger: CGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG...GGGGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS GCA 90 bp AGGGTTTCCTGCAGCTTCAGCGAGGCGGAGAAGTCCCCGGTCTTCTaGTTCACAGCCCTCGTGGCATCCGGCTCCACCTCTTCCCACTCC +
Preference number: 5 (lower is better)
Translates to: RVSCSFSEAEKSPVF*FTALVASGSTSSHS
Trigger: GGAGTGGGAAGAGGTGGAGCCGGATGCCACGAGGGCTGTGAAGCAGAAGACCGGGGACTTCTCCGCCTCGCTGAAGCTGCAGGAAACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
ENST00000461092.1
CDS CCA 90 bp AGGAACTCTGTGATGGGGAGGACCACAAAGCCCCTGGCCACAGGCTaGCACATCCAGCAGTCAGCGGCAGTGACCCAGACAGAGACCGGG +
Preference number: 5 (lower is better)
Translates to: RNSVMGRTTKPLATG*HIQQSAAVTQTETG
Trigger: CCCGGTCTCTGTCTGGGTCACTGCCGCTGACTGCTGGATGTGCCAGCCTGTGGCCAGGGGCTTTGTGGTCCTCCCCATCACAGAGTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
ENST00000486839.5
CDS-3UTR CAA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCGCGGTCTTGAGGAAGTaGCTCGGGTCGTGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLAVLRK*LGSWRR
Trigger: CCTCCTCCACGACCCGAGCAACTTCCTCAAGACCGC...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCGCGGTCTTGAGGAAGTaGCTCGGGTCGTGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTAVLRK*LGSWRR
Trigger: CCTCCTCCACGACCCGAGCAACTTCCTCAAGACCGC...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCGGTGGGCCCCAACACTaGGATGCCTCGAAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSGGPQH*DASKGF
Trigger: GAAACCCTTCGAGGCATCCAAGTGTTGGGGCCCACC...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp CAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCTGCACGACCACCGCGCCCGGCCTaGACTCAACCTCTTCTACCG +
Preference number: 5 (lower is better)
Translates to: QAHLGVNTEHPKHQSPARPPRPA*TQPLLP
Trigger: CGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG...TCGTGCAGGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCAGACCCTTCTCCATCTaGCCAGTAAGCACCAGCGGG +
Preference number: 5 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSRPFSI*PVSTSG
Trigger: CCCGCTGGTGCTTACTGGCAAGATGGAGAAGGGTCT...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCAAGGTGTGGGTCAGGTaGTACGCTGTGCTGGCCACG +
Preference number: 5 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTKVWVR*YAVLAT
Trigger: CGTGGCCAGCACAGCGTACAACCTGACCCACACCTT...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGCCACCGCGCCCGGCCTaGACTCAACCTCTTCTACCG +
Preference number: 5 (lower is better)
Translates to: GLIKGARTAETKHKGRARPPRPA*TQPLLP
Trigger: CGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCAGACCCTTCTCCATCTaGCCAGTAAGCACCAGCGGG +
Preference number: 5 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTRPFSI*PVSTSG
Trigger: CCCGCTGGTGCTTACTGGCAAGATGGAGAAGGGTCT...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCAGCGGTCTTGAGGAAGTaGCTCGGGTCGTGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPAVLRK*LGSWRR
Trigger: CCTCCTCCACGACCCGAGCAACTTCCTCAAGACCGC...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCCACTCCGCCACCACTTaGAGCTTCACGGTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTHSATT*SFTVKV
Trigger: GACCTTCACCGTGAAGCTCAAAGTGGTGGCGGAGTG...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp CACAGCCTGGGAGCAGATGGTTACAGCGACAGAGCCCAGACCCCACAGTCCTCCCTCCACCATGTCCTTTaGCTGAGTGGCATTCCGCAG +
Preference number: 5 (lower is better)
Translates to: HSLGADGYSDRAQTPQSSLHHVL*LSGIPQ
Trigger: CTGCGGAATGCCACTCAGCAAAAGGACATGGTGGAG...GGAGGACTGTGGGGTCTGGGCTCTGTCGCTGTAACCATCTGCTCCCAGGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS TCA 90 bp GGGTCCCGTCCCCGAAGTCCCAGCTGTAGAGAAACAAGGCGGTCTTaGGGAAGTTGCTCGGGTCGTGGAGGAGGAAGGAGACTTTCAGGA +
Preference number: 5 (lower is better)
Translates to: GSRPRSPSCRETRRS*GSCSGRGGGRRLSG
Trigger: TCCTGAAAGTCTCCTTCCTCCTCCACGACCCGAGCAACTTCCTCAAGACCGCCTTGTTTCTCTACAGCTGGGACTTCGGGGACGGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp GGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGGGAGGGCCCGGGGTGGGCCCCAACACTaGGATGCCTCGAAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: GLIKGARTAETKHKGRARGGPQH*DASKGF
Trigger: GAAACCCTTCGAGGCATCCAAGTGTTGGGGCCCACC...CCGGGCCCTCCCTTTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCCTTCTGGCCTCATTATaGTCTCAGCCACAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTLLASL*SQPQPR
Trigger: CCTGGGCTGTGGCTGAGACAATAATGAGGCCAGAAG...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCACACTCCGCCACCACTTaGAGCTTCACGGTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPHSATT*SFTVKV
Trigger: GACCTTCACCGTGAAGCTCAAAGTGGTGGCGGAGTG...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGGGTGGGCCCCAACACTaGGATGCCTCGAAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGGGPQH*DASKGF
Trigger: GAAACCCTTCGAGGCATCCAAGTGTTGGGGCCCACC...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp ACCCCAAGCATCAAAGTCCTGCACGAAGCCTCTTCAAAGGTAGGGGGTCAAGGGAAGGTGTGGGTCAGGTaGTACGCTGTGCTGGCCACG +
Preference number: 5 (lower is better)
Translates to: TPSIKVLHEASSKVGGQGKVWVR*YAVLAT
Trigger: CGTGGCCAGCACAGCGTACAACCTGACCCACACCTT...CCCTTGACCCCCTACCTTTGAAGAGGCTTCGTGCAGGACTTTGATGCTTGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp GGGCAGCCAGGCCCACCTGGGAGTCAACACGGAACACCCCAAGCATCAAAGTCCACCTGTCAGGGCTGCTaGGAGGTCAAATTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: GQPGPPGSQHGTPQASKSTCQGC*EVKFPF
Trigger: GAAAGGAAATTTGACCTCCAAGCAGCCCTGACAGGT...GGACTTTGATGCTTGGGGTGTTCCGTGTTGACTCCCAGGTGGGCCTGGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCAGGTGGCTCCGGGTTCTaGTCAGACATGGGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPGGSGF*SDMGEK
Trigger: CTTTTCCCCCATGTCTGACAAGAACCCGGAGCCACC...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416379.6
CDS-3UTR CAA 90 bp CCACCGCGCCCGGCCTTGACTCAACCTCTTCTACCGCTGCAAGGCCTTTTCCTCCTATCGGTGGTGAGATaGAGTTCATACAGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: PPRPALTQPLLPLQGLFLLSVVR*SSYRPV
Trigger: GACAGGCCTGTATGAACTCAATCTCACCACCGATAG...GAGGAAAAGGCCTTGCAGCGGTAGAAGAGGTTGAGTCAAGGCCGGGCGCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450876.5
CDS-3UTR CAA 90 bp TGGCTGAACTGTACAGATGGATGGATGATCCAGGCCAACAGCCCCACGCAAATGAAGGTGTGGGTCAGGTaGTACGCTGTGCTGGCCACG +
Preference number: 5 (lower is better)
Translates to: WLNCTDGWMIQANSPTQMKVWVR*YAVLAT
Trigger: CGTGGCCAGCACAGCGTACAACCTGACCCACACCTT...CATTTGCGTGGGGCTGTTGGCCTGGATCATCCATCCATCTGTACAGTTCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp ACCCTTTATGACCTTCTTTCTAGCTCTCTGGCACAGGTAGGGCTGTCTGGGGGAAAGGTGTGGGTCAGGTaGTACGCTGTGCTGGCCACG +
Preference number: 5 (lower is better)
Translates to: TLYDLLSSSLAQVGLSGGKVWVR*YAVLAT
Trigger: CGTGGCCAGCACAGCGTACAACCTGACCCACACCTT...TCCCCCAGACAGCCCTACCTGTGCCAGAGAGCTAGAAAGAAGGTCATAAAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp ATCCAGGCCAACAGCCCCACGCAAATGAACCCCTCCTGGTCAGTGGTGCACACCACCTGTCAGGGCTGCTaGGAGGTCAAATTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: IQANSPTQMNPSWSVVHTTCQGC*EVKFPF
Trigger: GAAAGGAAATTTGACCTCCAAGCAGCCCTGACAGGT...GGTGTGCACCACTGACCAGGAGGGGTTCATTTGCGTGGGGCTGTTGGCCTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCATCCTGGGCTCTAAAATaGCATCTCGGTCAGGCACGG +
Preference number: 5 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPSWALK*HLGQAR
Trigger: CCGTGCCTGACCGAGATGCAATTTTAGAGCCCAGGA...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450876.5
CDS TCA 90 bp TGCACGCTCGTGGCTCCGAGATGCTACTCCTCATTCAAGAACTGTTaGGAGCTTAAGGTGCGCCAGGCGTTGGGCGAAAGGCCTCGAAAT +
Preference number: 5 (lower is better)
Translates to: CTLVAPRCYSSFKNC*ELKVRQALGERPRN
Trigger: ATTTCGAGGCCTTTCGCCCAACGCCTGGCGCACCTTAAGCTCTCAACAGTTCTTGAATGAGGAGTAGCATCTCGGAGCCACGAGCGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445790.1
CDS-3UTR CAA 90 bp ACCCTTTATGACCTTCTTTCTAGCTCTCTGGCACAGGTAGGGCTGTCTGGGGGACACTCCGCCACCACTTaGAGCTTCACGGTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: TLYDLLSSSLAQVGLSGGHSATT*SFTVKV
Trigger: GACCTTCACCGTGAAGCTCAAAGTGGTGGCGGAGTG...TCCCCCAGACAGCCCTACCTGTGCCAGAGAGCTAGAAAGAAGGTCATAAAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp ATGGACAGCAGATGTGCCAATATGAGAGGAATGGGCAGTGGGCAGCCAGGCCCACACACGTTCGCTGCTTaGGCCCACATCACGTATTTC +
Preference number: 5 (lower is better)
Translates to: MDSRCANMRGMGSGQPGPHTFAA*AHITYF
Trigger: GAAATACGTGATGTGGGCCAAAGCAGCGAACGTGTG...TGGGCCTGGCTGCCCACTGCCCATTCCTCTCATATTGGCACATCTGCTGTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450876.5
CDS-3UTR CAA 90 bp TTCAGCTCTAGTGCAGGGTGCATCCCAGCAACCGACTTAACCAGATACAGAGCTCACTCCGCCACCACTTaGAGCTTCACGGTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: FSSSAGCIPATDLTRYRAHSATT*SFTVKV
Trigger: GACCTTCACCGTGAAGCTCAAAGTGGTGGCGGAGTG...AGCTCTGTATCTGGTTAAGTCGGTTGCTGGGATGCACCCTGCACTAGAGCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp ACCCTTTATGACCTTCTTTCTAGCTCTCTGGCACAGGTAGGGCTGTCTGGGGGACTCCACCATGTCCTTTaGCTGAGTGGCATTCCGCAG +
Preference number: 5 (lower is better)
Translates to: TLYDLLSSSLAQVGLSGGLHHVL*LSGIPQ
Trigger: CTGCGGAATGCCACTCAGCAAAAGGACATGGTGGAG...TCCCCCAGACAGCCCTACCTGTGCCAGAGAGCTAGAAAGAAGGTCATAAAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp ACCCTTTATGACCTTCTTTCTAGCTCTCTGGCACAGGTAGGGCTGTCTGGGGGACTTCTGGCCTCATTATaGTCTCAGCCACAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: TLYDLLSSSLAQVGLSGGLLASL*SQPQPR
Trigger: CCTGGGCTGTGGCTGAGACAATAATGAGGCCAGAAG...TCCCCCAGACAGCCCTACCTGTGCCAGAGAGCTAGAAAGAAGGTCATAAAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS GCA 90 bp CTCCGAGATGCTACTCCTCATTCAAGAACTGTTGAGAGCTTAAGGTaGGCCAGGCGTTGGGCGAAAGGCCTCGAAATTCCTCTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: LRDATPHSRTVESLR*ARRWAKGLEIPLAA
Trigger: AGCAGCAAGAGGAATTTCGAGGCCTTTCGCCCAACGCCTGGCGCACCTTAAGCTCTCAACAGTTCTTGAATGAGGAGTAGCATCTCGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445790.1
CDS-3UTR CAA 90 bp TGGCTGAACTGTACAGATGGATGGATGATCCAGGCCAACAGCCCCACGCAAATGCTATCGGTGGTGAGATaGAGTTCATACAGGCCTGCG +
Preference number: 5 (lower is better)
Translates to: WLNCTDGWMIQANSPTQMLSVVR*SSYRPA
Trigger: CGCAGGCCTGTATGAACTCAATCTCACCACCGATAG...CATTTGCGTGGGGCTGTTGGCCTGGATCATCCATCCATCTGTACAGTTCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000416379.6
CDS-3UTR CAA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAAAGACCCTTCTCCATCTaGCCAGTAAGCACCAGCGGG +
Preference number: 5 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQRPFSI*PVSTSG
Trigger: CCCGCTGGTGCTTACTGGCAAGATGGAGAAGGGTCT...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACTTCTGGCCTCATTATaGTCTCAGCCACAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKALLASL*SQPQPR
Trigger: CCTGGGCTGTGGCTGAGACAATAATGAGGCCAGAAG...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS CCA 90 bp GGAAGTTCAAGGTCACGGTCATCTTTTGGAAGGTCTGAATTAGGGTaGGCCCCAACACTTGGATGCCTCGAAGGGTTTCCTGCAGCTTCA +
Preference number: 5 (lower is better)
Translates to: GSSRSRSSFGRSELG*APTLGCLEGFPAAS
Trigger: TGAAGCTGCAGGAAACCCTTCGAGGCATCCAAGTGTTGGGGCCCACCCTAATTCAGACCTTCCAAAAGATGACCGTGACCTTGAACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
ENST00000461092.1
CDS-3UTR CAA 90 bp CAGCAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACTATCGGTGGTGAGATaGAGTTCATACAGGCCTGCG +
Preference number: 5 (lower is better)
Translates to: QQGLGWPYKGRKNCRDKALSVVR*SSYRPA
Trigger: CGCAGGCCTGTATGAACTCAATCTCACCACCGATAG...TGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339375.9
ENST00000416379.6
CDS-3UTR CAA 90 bp CAGGGACTAGGATGGCCTTATAAAGGGCGCAAGAACTGCAGAGACAAAGCACAACTCCACCATGTCCTTTaGCTGAGTGGCATTCCGCAG +
Preference number: 5 (lower is better)
Translates to: QGLGWPYKGRKNCRDKAQLHHVL*LSGIPQ
Trigger: CTGCGGAATGCCACTCAGCAAAAGGACATGGTGGAG...TTGTGCTTTGTCTCTGCAGTTCTTGCGCCCTTTATAAGGCCATCCTAGTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp TGGCTGAACTGTACAGATGGATGGATGATCCAGGCCAACAGCCCCACGCAAATGACCTGTCAGGGCTGCTaGGAGGTCAAATTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: WLNCTDGWMIQANSPTQMTCQGC*EVKFPF
Trigger: GAAAGGAAATTTGACCTCCAAGCAGCCCTGACAGGT...CATTTGCGTGGGGCTGTTGGCCTGGATCATCCATCCATCTGTACAGTTCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTGGTGGGCCCCAACACTaGGATGCCTCGAAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: FHENELHNSVNAIFCTQPGGPQH*DASKGF
Trigger: GAAACCCTTCGAGGCATCCAAGTGTTGGGGCCCACC...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTCTCCACCATGTCCTTTaGCTGAGTGGCATTCCGCAG +
Preference number: 5 (lower is better)
Translates to: FHENELHNSVNAIFCTQPLHHVL*LSGIPQ
Trigger: CTGCGGAATGCCACTCAGCAAAAGGACATGGTGGAG...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000450876.5
CDS-3UTR CAA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTAGGCCGGAGAATTACTaGAACCTGGGAGATGGTGGT +
Preference number: 5 (lower is better)
Translates to: FHENELHNSVNAIFCTQPRPENY*NLGDGG
Trigger: ACCACCATCTCCCAGGTTCAAGTAATTCTCCGGCCT...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450876.5
CDS-3UTR CAA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTAAGCCAGAGGGTCACTaGAGCCCAGGAGTTTTAGAT +
Preference number: 5 (lower is better)
Translates to: FHENELHNSVNAIFCTQPKPEGH*SPGVLD
Trigger: ATCTAAAACTCCTGGGCTCAAGTGACCCTCTGGCTT...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450876.5
CDS-3UTR CAA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTTGTAATCACAGCGCTTaGAAGCCAGAGGGTCACTTG +
Preference number: 5 (lower is better)
Translates to: FHENELHNSVNAIFCTQPCNHSA*KPEGHL
Trigger: CAAGTGACCCTCTGGCTTCAAAGCGCTGTGATTACA...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450876.5
CDS-3UTR CAA 90 bp TTTCATGAGAATGAGCTGCACAATAGTGTAAATGCCATTTTCTGCACACAGCCTAGCTCCAGGTCCATTTaGGGAAATCACTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: FHENELHNSVNAIFCTQPSSRSI*GNHSWK
Trigger: CTTCCAGGAGTGATTTCCCAAAATGGACCTGGAGCT...AGGCTGTGTGCAGAAAATGGCATTTACACTATTGTGCAGCTCATTCTCATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450876.5
CDS GCA 72 bp GGCAAGCCAGAGGATGCGGCCGAGGCGCGACCACACTaGCTGGGCCATTGCGGGGCCCGGAGCGGGAGAAGC +
Preference number: 6 (lower is better)
Translates to: GKPEDAAEARPH*LGHCGARSGRS
Trigger: GCTTCTCCCGCTCCGGGCCCCGCAATGGCCCAGGCAGTGTGGTCGCGCCTCGGCCGCATCCTCTGGCTTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000461092.1
CDS CCA 72 bp AGCCAGAGGATGCGGCCGAGGCGCGACCACACTGCCTaGGCCATTGCGGGGCCCGGAGCGGGAGAAGCGTGG +
Preference number: 6 (lower is better)
Translates to: SQRMRPRRDHTA*AIAGPGAGEAW
Trigger: CCACGCTTCTCCCGCTCCGGGCCCCGCAATGGCCCAGGCAGTGTGGTCGCGCCTCGGCCGCATCCTCTGGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000461092.1
CDS GCA 72 bp AGCGGTAGAGGTGGGCGTCAGCGGGCAGGGCCAGGCTaGCGTTGTCCTTGGCCACCAGGCTGGCCGAGATGG +
Preference number: 6 (lower is better)
Translates to: SGRGGRQRAGPG*RCPWPPGWPRW
Trigger: CCATCTCGGCCAGCCTGGTGGCCAAGGACAACGGCAGCCTGGCCCTGCCCGCTGACGCCCACCTCTACCGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000445790.1
ENST00000450876.5
ENST00000486839.5
CDS CCA 72 bp GCAGGGCCAGGCTGCCGTTGTCCTTGGCCACCAGGCTaGCCGAGATGGTCACCACCGCTCCCGTGGTGGCAG +
Preference number: 6 (lower is better)
Translates to: AGPGCRCPWPPG*PRWSPPLPWWQ
Trigger: CTGCCACCACGGGAGCGGTGGTGACCATCTCGGCCAGCCTGGTGGCCAAGGACAACGGCAGCCTGGCCCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000445790.1
ENST00000450876.5
ENST00000486839.5
CDS CCA 72 bp GGCTGCCGTTGTCCTTGGCCACCAGGCTGGCCGAGATaGTCACCACCGCTCCCGTGGTGGCAGGGCTATCGG +
Preference number: 6 (lower is better)
Translates to: GCRCPWPPGWPR*SPPLPWWQGYR
Trigger: CCGATAGCCCTGCCACCACGGGAGCGGTGGTGACCATCTCGGCCAGCCTGGTGGCCAAGGACAACGGCAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000445790.1
ENST00000450876.5
ENST00000486839.5
CDS TCA 72 bp TGGCCACAGGCTGGCACATCCAGCAGTCAGCGGCAGTaGCCCAGACAGAGACCGGGAATTCCCCGGGCACGT +
Preference number: 6 (lower is better)
Translates to: WPQAGTSSSQRQ*PRQRPGIPRAR
Trigger: ACGTGCCCGGGGAATTCCCGGTCTCTGTCTGGGTCACTGCCGCTGACTGCTGGATGTGCCAGCCTGTGGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000445790.1
ENST00000450876.5
ENST00000486839.5
CDS GCA 72 bp TGCAGCTTCAGCGAGGCGGAGAAGTCCCCGGTCTTCTaGTTCACAGCCCTCGTGGCATCCGGCTCCACCTCT +
Preference number: 6 (lower is better)
Translates to: CSFSEAEKSPVF*FTALVASGSTS
Trigger: AGAGGTGGAGCCGGATGCCACGAGGGCTGTGAAGCAGAAGACCGGGGACTTCTCCGCCTCGCTGAAGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
ENST00000461092.1
CDS CAA 72 bp ACCGCTCCCGTGGTGGCAGGGCTATCGGTGGTGAGATaGAGTTCATACAGGCTCAGCGTCCCCAGGGGCGTG +
Preference number: 6 (lower is better)
Translates to: TAPVVAGLSVVR*SSYRLSVPRGV
Trigger: CACGCCCCTGGGGACGCTGAGCCTGTATGAACTCAATCTCACCACCGATAGCCCTGCCACCACGGGAGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445790.1
CDS TCA 72 bp GCAAGAAAGGCCCACAGCACATCTGGCAGCAGCACCTaGCCCCAGAGGGTGGCTCCGGGTTCTCCACCATGT +
Preference number: 6 (lower is better)
Translates to: ARKAHSTSGSST*PQRVAPGSPPC
Trigger: ACATGGTGGAGAACCCGGAGCCACCCTCTGGGGTCAGGTGCTGCTGCCAGATGTGCTGTGGGCCTTTCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000450876.5
CDS TCA 72 bp GCAAGAAAGGCCCACAGCACATCTGGCAGCAGCACCTaGCCCCAGAGGGTGGCTCCGGGTTCTTGTCAGACA +
Preference number: 6 (lower is better)
Translates to: ARKAHSTSGSST*PQRVAPGSCQT
Trigger: TGTCTGACAAGAACCCGGAGCCACCCTCTGGGGTCAGGTGCTGCTGCCAGATGTGCTGTGGGCCTTTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416379.6
CDS GCA 72 bp GGAAGGTCTGAATTAGGGTGGGCCCCAACACTTGGATaGCTCGAAGGGTTTCCTGCAGCTTCAGCGAGGCGG +
Preference number: 6 (lower is better)
Translates to: GRSELGWAPTLG*LEGFPAASARR
Trigger: CCGCCTCGCTGAAGCTGCAGGAAACCCTTCGAGGCATCCAAGTGTTGGGGCCCACCCTAATTCAGACCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
ENST00000461092.1
CDS CCA 72 bp ACAGCACATCTGGCAGCAGCACCTGACCCCAGAGGGTaGCTCCGGGTTCTCCACCATGTCCTTTTGCTGAGT +
Preference number: 6 (lower is better)
Translates to: TAHLAAAPDPRG*LRVLHHVLLLS
Trigger: ACTCAGCAAAAGGACATGGTGGAGAACCCGGAGCCACCCTCTGGGGTCAGGTGCTGCTGCCAGATGTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000450876.5
CDS CAA 72 bp ACCACACGGATGGTGGAGCTGAGACCCTTCTCCATCTaGCCAGTAAGCACCAGCGGGGTGTGGATCCAGTGG +
Preference number: 6 (lower is better)
Translates to: TTRMVELRPFSI*PVSTSGVWIQW
Trigger: CCACTGGATCCACACCCCGCTGGTGCTTACTGGCAAGATGGAGAAGGGTCTCAGCTCCACCATCCGTGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339375.9
ENST00000416379.6
ENST00000445790.1
ENST00000450876.5
ENST00000486839.5
CDS CAA 72 bp CCCAGAGGGTGGCTCCGGGTTCTCCACCATGTCCTTTaGCTGAGTGGCATTCCGCAGGGTCATGTACATGAT +
Preference number: 6 (lower is better)
Translates to: PRGWLRVLHHVL*LSGIPQGHVHD
Trigger: ATCATGTACATGACCCTGCGGAATGCCACTCAGCAAAAGGACATGGTGGAGAACCCGGAGCCACCCTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000450876.5
CDS TCA 72 bp GTGGCTCCGAGATGCTACTCCTCATTCAAGAACTGTTaGGAGCTTAAGGTGCGCCAGGCGTTGGGCGAAAGG +
Preference number: 6 (lower is better)
Translates to: VAPRCYSSFKNC*ELKVRQALGER
Trigger: CCTTTCGCCCAACGCCTGGCGCACCTTAAGCTCTCAACAGTTCTTGAATGAGGAGTAGCATCTCGGAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445790.1
CDS GCA 72 bp CGCCAGGCGTTGGGCGAAAGGCCTCGAAATTCCTCTTaGTGCTGCTGCTGCTGCTGCTTCCTCTTTTCTTTT +
Preference number: 6 (lower is better)
Translates to: RQALGERPRNSS*CCCCCCFLFSF
Trigger: AAAAGAAAAGAGGAAGCAGCAGCAGCAGCAGCAGCAAGAGGAATTTCGAGGCCTTTCGCCCAACGCCTGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445790.1
CDS CCA 72 bp AGAAACAAGGCGGTCTTGAGGAAGTTGCTCGGGTCGTaGAGGAGGAAGGAGACTTTCAGGACGGTCTTAGTG +
Preference number: 6 (lower is better)
Translates to: RNKAVLRKLLGS*RRKETFRTVLV
Trigger: CACTAAGACCGTCCTGAAAGTCTCCTTCCTCCTCCACGACCCGAGCAACTTCCTCAAGACCGCCTTGTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
ENST00000486839.5
CDS CCA 72 bp TCAAGAACTGTTGAGAGCTTAAGGTGCGCCAGGCGTTaGGCGAAAGGCCTCGAAATTCCTCTTGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: SRTVESLRCARR*AKGLEIPLAAA
Trigger: AGCAGCAGCAAGAGGAATTTCGAGGCCTTTCGCCCAACGCCTGGCGCACCTTAAGCTCTCAACAGTTCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445790.1
CDS GCA 72 bp GCTACTCCTCATTCAAGAACTGTTGAGAGCTTAAGGTaGGCCAGGCGTTGGGCGAAAGGCCTCGAAATTCCT +
Preference number: 6 (lower is better)
Translates to: ATPHSRTVESLR*ARRWAKGLEIP
Trigger: AGGAATTTCGAGGCCTTTCGCCCAACGCCTGGCGCACCTTAAGCTCTCAACAGTTCTTGAATGAGGAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445790.1
CDS CCA 72 bp AGGTCACGGTCATCTTTTGGAAGGTCTGAATTAGGGTaGGCCCCAACACTTGGATGCCTCGAAGGGTTTCCT +
Preference number: 6 (lower is better)
Translates to: RSRSSFGRSELG*APTLGCLEGFP
Trigger: AGGAAACCCTTCGAGGCATCCAAGTGTTGGGGCCCACCCTAATTCAGACCTTCCAAAAGATGACCGTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
ENST00000461092.1
CDS CAA 90 bp TCAGCTCACACCTGTAATCACAGCGCTTTGAAGCCAGAGGGTCACTaGAGCCCAGGAGTTTTAGATCAGCCTGAACAACACAGCGACACC +
Preference number: 6 (lower is better)
Translates to: SAHTCNHSALKPEGH*SPGVLDQPEQHSDT
Trigger: GGTGTCGCTGTGTTGTTCAGGCTGATCTAAAACTCCTGGGCTCAAGTGACCCTCTGGCTTCAAAGCGCTGTGATTACAGGTGTGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450876.5
CDS TCA 72 bp AGGAAGTTCAAGGTCACGGTCATCTTTTGGAAGGTCTaGATTAGGGTGGGCCCCAACACTTGGATGCCTCGA +
Preference number: 6 (lower is better)
Translates to: RKFKVTVIFWKV*IRVGPNTWMPR
Trigger: TCGAGGCATCCAAGTGTTGGGGCCCACCCTAATTCAGACCTTCCAAAAGATGACCGTGACCTTGAACTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339375.9
ENST00000345589.4
ENST00000416379.6
ENST00000450876.5
ENST00000461092.1
CDS CAA 72 bp ACCTGTAATCACAGCGCTTTGAAGCCAGAGGGTCACTaGAGCCCAGGAGTTTTAGATCAGCCTGAACAACAC +
Preference number: 6 (lower is better)
Translates to: TCNHSALKPEGH*SPGVLDQPEQH
Trigger: GTGTTGTTCAGGCTGATCTAAAACTCCTGGGCTCAAGTGACCCTCTGGCTTCAAAGCGCTGTGATTACAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450876.5