RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM121B (Homo sapiens)

Ensembl gene IDs: ENSG00000183307

Ensembl transcript IDs: ENST00000331437.4, ENST00000399875.1

Found 382 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACACCCAGCCCAGGCACCCAAGCCCTCCCTCCGGCCTTCTCTGCTaGGGCTTCACACACCCAGTACAGAGCAGGGAATGTTCTGCAAGT +
Preference number: 1 (lower is better)
Translates to: HTQPRHPSPPSGLLC*GFTHPVQSRECSAS
Trigger: ACTTGCAGAACATTCCCTGCTCTGTACTGGGTGTGTGAAGCCCCAGCAGAGAAGGCCGGAGGGAGGGCTTGGGTGCCTGGGCTGGGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR GCA 90 bp GGCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATaGACGTGCTGGCACTGGCCTCAGGAGACAGTGCCCTGCCTTGGC +
Preference number: 1 (lower is better)
Translates to: GGSRDSEPRILFCEP*TCWHWPQETVPCLG
Trigger: GCCAAGGCAGGGCACTGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR CCA 90 bp TCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTaGCCTCAGGAGACAGTGCCCTGCCTTGGCTGTCAGGTCCACGGA +
Preference number: 1 (lower is better)
Translates to: SEPRILFCEPCTCWH*PQETVPCLGCQVHG
Trigger: TCCGTGGACCTGACAGCCAAGGCAGGGCACTGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR CCA 90 bp AGAGAGGAGAGGGTAAGTGCACCTACCTCCCTCACCGTTAACTGCTaGTCTCCCTCCAAGCCGTCCTCACCCCAGGGTGCAGAAGAACAC +
Preference number: 1 (lower is better)
Translates to: REERVSAPTSLTVNC*SPSKPSSPQGAEEH
Trigger: GTGTTCTTCTGCACCCTGGGGTGAGGACGGCTTGGAGGGAGACCAGCAGTTAACGGTGAGGGAGGTAGGTGCACTTACCCTCTCCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR CCA 90 bp CACACCCAGTACAGAGCAGGGAATGTTCTGCAAGTGCAGCCTGGCTaGCTTCTCTCCCAGCCACCTTTACAGGGAGCATCAGGACCAGGG +
Preference number: 1 (lower is better)
Translates to: HTQYRAGNVLQVQPG*LLSQPPLQGASGPG
Trigger: CCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGGAGAGAAGCCAGCCAGGCTGCACTTGCAGAACATTCCCTGCTCTGTACTGGGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR GCA 90 bp AGAAGAGAGGAGAGGGTAAGTGCACCTACCTCCCTCACCGTTAACTaGTGGTCTCCCTCCAAGCCGTCCTCACCCCAGGGTGCAGAAGAA +
Preference number: 1 (lower is better)
Translates to: RREERVSAPTSLTVN*WSPSKPSSPQGAEE
Trigger: TTCTTCTGCACCCTGGGGTGAGGACGGCTTGGAGGGAGACCAGCAGTTAACGGTGAGGGAGGTAGGTGCACTTACCCTCTCCTCTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR GCA 90 bp CTGGGGCTTCACACACCCAGTACAGAGCAGGGAATGTTCTGCAAGTaGAGCCTGGCTGGCTTCTCTCCCAGCCACCTTTACAGGGAGCAT +
Preference number: 1 (lower is better)
Translates to: LGLHTPSTEQGMFCK*SLAGFSPSHLYREH
Trigger: ATGCTCCCTGTAAAGGTGGCTGGGAGAGAAGCCAGCCAGGCTGCACTTGCAGAACATTCCCTGCTCTGTACTGGGTGTGTGAAGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR GCA 90 bp TCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTaGTGGCACTGGCCTCAGGAGACAGTGCCCTGCCTTGGCTGTCAG +
Preference number: 1 (lower is better)
Translates to: SRDSEPRILFCEPCT*WHWPQETVPCLGCQ
Trigger: CTGACAGCCAAGGCAGGGCACTGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR GCA 90 bp CAGTGCCCTGCCTTGGCTGTCAGGTCCACGGAGAAATCTCAGGTTTaGCCCTTCACTAGGGATGCCCTAGAAAGCAAGGGCAAAGGAAGC +
Preference number: 1 (lower is better)
Translates to: QCPALAVRSTEKSQV*PFTRDALESKGKGS
Trigger: GCTTCCTTTGCCCTTGCTTTCTAGGGCATCCCTAGTGAAGGGGCAAACCTGAGATTTCTCCGTGGACCTGACAGCCAAGGCAGGGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR GCA 90 bp TTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACAGTaGCCTGCCTTGGCTGTCAGGTCCACGGAGAAATCTCAGGTTTGC +
Preference number: 1 (lower is better)
Translates to: FSVNHARAGTGLRRQ*PALAVRSTEKSQVC
Trigger: GCAAACCTGAGATTTCTCCGTGGACCTGACAGCCAAGGCAGGGCACTGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR CCA 90 bp TTCACACACCCAGTACAGAGCAGGGAATGTTCTGCAAGTGCAGCCTaGCTGGCTTCTCTCCCAGCCACCTTTACAGGGAGCATCAGGACC +
Preference number: 1 (lower is better)
Translates to: FTHPVQSRECSASAA*LASLPATFTGSIRT
Trigger: GGTCCTGATGCTCCCTGTAAAGGTGGCTGGGAGAGAAGCCAGCCAGGCTGCACTTGCAGAACATTCCCTGCTCTGTACTGGGTGTGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR GCA 90 bp CTGGGGCTGAACTGGGGGCCTGATATCTGCCAGAATTGGCCAAGTTaGCATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGG +
Preference number: 1 (lower is better)
Translates to: LGLNWGPDICQNWPS*HQLLDISREVAAHW
Trigger: CCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATGGCAACTTGGCCAATTCTGGCAGATATCAGGCCCCCAGTTCAGCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR TCA 90 bp CTTCAAGTTTCACCCCCACCACATCCTGTTGAGGGTGGAGGGAAGTaGGTATTTCCTGGCCTTGTTAGCTGCTGTCCTCCTGCACCCTTA +
Preference number: 1 (lower is better)
Translates to: LQVSPPPHPVEGGGK*VFPGLVSCCPPAPL
Trigger: TAAGGGTGCAGGAGGACAGCAGCTAACAAGGCCAGGAAATACTCACTTCCCTCCACCCTCAACAGGATGTGGTGGGGGTGAAACTTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR GCA 90 bp CCAGCTATTGGGCCACATAGGGTGAGGGACTGGAAGCACAGATTGTaGATGGAGTGTAAACATTTTCCCCCGCTGTTCCCTGCTCTGAGA +
Preference number: 1 (lower is better)
Translates to: PAIGPHRVRDWKHRL*MECKHFPPLFPALR
Trigger: TCTCAGAGCAGGGAACAGCGGGGGAAAATGTTTACACTCCATGCACAATCTGTGCTTCCAGTCCCTCACCCTATGTGGCCCAATAGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR TCA 90 bp GATTGTGCATGGAGTGTAAACATTTTCCCCCGCTGTTCCCTGCTCTaGGAGCATGAGGAGGCTCAAGAGAACTCTGGTCAAGCCTTCTGC +
Preference number: 1 (lower is better)
Translates to: DCAWSVNIFPRCSLL*EHEEAQENSGQAFC
Trigger: GCAGAAGGCTTGACCAGAGTTCTCTTGAGCCTCCTCATGCTCTCAGAGCAGGGAACAGCGGGGGAAAATGTTTACACTCCATGCACAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR GCA 90 bp CCTGCCTCAAAGACTGCAAGAGTGACATTCCACACCGACTGTAAGTaGACAGTCCCCGGATGTCTCTTGTCATCACCCTCAATGAGAGGA +
Preference number: 1 (lower is better)
Translates to: PASKTARVTFHTDCK*TVPGCLLSSPSMRG
Trigger: TCCTCTCATTGAGGGTGATGACAAGAGACATCCGGGGACTGTGCACTTACAGTCGGTGTGGAATGTCACTCTTGCAGTCTTTGAGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR CCA 90 bp AGCACGGAGGTAGAAATGCTCACTCACCCAAGAAAGGGTGCAGTTTaGTCCTTAGAGAATGGATCCCCTCCTCTCCCTGAGCTGAGAAGA +
Preference number: 1 (lower is better)
Translates to: STEVEMLTHPRKGAV*SLENGSPPLPELRR
Trigger: TCTTCTCAGCTCAGGGAGAGGAGGGGATCCATTCTCTAAGGACCAAACTGCACCCTTTCTTGGGTGAGTGAGCATTTCTACCTCCGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR CCA 90 bp AAGTGTGAAATCCAGCCAGCTATTGGGCCACATAGGGTGAGGGACTaGAAGCACAGATTGTGCATGGAGTGTAAACATTTTCCCCCGCTG +
Preference number: 1 (lower is better)
Translates to: KCEIQPAIGPHRVRD*KHRLCMECKHFPPL
Trigger: CAGCGGGGGAAAATGTTTACACTCCATGCACAATCTGTGCTTCCAGTCCCTCACCCTATGTGGCCCAATAGCTGGCTGGATTTCACACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR CCA 90 bp GTATCTATCACCTGGAAGAAATCCAAGAGACACATCAGTGGAAAGTaGGTTCTGGGTCAATTTCAAGGCATGGGACAATGGCCACTAACC +
Preference number: 1 (lower is better)
Translates to: VSITWKKSKRHISGK*VLGQFQGMGQWPLT
Trigger: GGTTAGTGGCCATTGTCCCATGCCTTGAAATTGACCCAGAACCCACTTTCCACTGATGTGTCTCTTGGATTTCTTCCAGGTGATAGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR TCA 90 bp TACCAATTAAGTGTGAAATCCAGCCAGCTATTGGGCCACATAGGGTaGGGGACTGGAAGCACAGATTGTGCATGGAGTGTAAACATTTTC +
Preference number: 1 (lower is better)
Translates to: YQLSVKSSQLLGHIG*GTGSTDCAWSVNIF
Trigger: GAAAATGTTTACACTCCATGCACAATCTGTGCTTCCAGTCCCTCACCCTATGTGGCCCAATAGCTGGCTGGATTTCACACTTAATTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR CCA 90 bp ACACTTTGTATCTATCACCTGGAAGAAATCCAAGAGACACATCAGTaGAAAGTGGGTTCTGGGTCAATTTCAAGGCATGGGACAATGGCC +
Preference number: 1 (lower is better)
Translates to: TLCIYHLEEIQETHQ*KVGSGSISRHGTMA
Trigger: GGCCATTGTCCCATGCCTTGAAATTGACCCAGAACCCACTTTCCACTGATGTGTCTCTTGGATTTCTTCCAGGTGATAGATACAAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR TCA 90 bp AGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTCAAAAGAATGTaGGAGCTGAAATTACCTTCAACCTTAGAGATCACTCATCTAACT +
Preference number: 1 (lower is better)
Translates to: SIRTRAFKSHKLKRM*ELKLPSTLEITHLT
Trigger: AGTTAGATGAGTGATCTCTAAGGTTGAAGGTAATTTCAGCTCTCACATTCTTTTGAGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR CAA 90 bp GGGAGGCGGGGGCTTGGCCTGGGTGCTGAGTTAACGGCCAGTGACTaGGCACTTCTGACCCTCCCTGTGCACTCTGCAGCTGTGCCAGGC +
Preference number: 2 (lower is better)
Translates to: GRRGLGLGAELTASD*ALLTLPVHSAAVPG
Trigger: GCCTGGCACAGCTGCAGAGTGCACAGGGAGGGTCAGAAGTGCCAAGTCACTGGCCGTTAACTCAGCACCCAGGCCAAGCCCCCGCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR CAA 90 bp AACCATGCACGTGCTGGCACTGGCCTCAGGAGACAGTGCCCTGCCTaGGCTGTCAGGTCCACGGAGAAATCTCAGGTTTGCCCCTTCACT +
Preference number: 2 (lower is better)
Translates to: NHARAGTGLRRQCPA*AVRSTEKSQVCPFT
Trigger: AGTGAAGGGGCAAACCTGAGATTTCTCCGTGGACCTGACAGCCAAGGCAGGGCACTGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR GCA 90 bp GCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTGCTTGCACTCTGCAGCTGTaGCAGGCCCTGCCCCACACC +
Preference number: 2 (lower is better)
Translates to: AVLEILSPGSFSVNHARACTLQL*QALPHT
Trigger: GGTGTGGGGCAGGGCCTGGCACAGCTGCAGAGTGCA...AGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTTTCAAGGGGAGTACCTaGGCAGCTCCCAGGGGCCCA +
Preference number: 2 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTFKGST*AAPRGP
Trigger: TGGGCCCCTGGGAGCTGCCCAGGTACTCCCCTTGAA...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACACAAGTGCAGCCTGGCTaGCTTCTCTCCCAGCCACCT +
Preference number: 2 (lower is better)
Translates to: PRILFCEPCTCWHWPQETQVQPG*LLSQPP
Trigger: AGGTGGCTGGGAGAGAAGCCAGCCAGGCTGCACTTG...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR GCA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACATCCCTCACCGTTAACTaGTGGTCTCCCTCCAAGCCG +
Preference number: 2 (lower is better)
Translates to: PRILFCEPCTCWHWPQETSLTVN*WSPSKP
Trigger: CGGCTTGGAGGGAGACCAGCAGTTAACGGTGAGGGA...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp CTTGTCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCTTCAAGGGGAGTACCTaGGCAGCTCCCAGGGGCCCA +
Preference number: 2 (lower is better)
Translates to: LVITLNERKRESSAACLGFKGST*AAPRGP
Trigger: TGGGCCCCTGGGAGCTGCCCAGGTACTCCCCTTGAA...GCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCAGAGGGGGCTTCAAGTaGGAGGCGGGGGCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSRGGFK*EAGAWP
Trigger: AGGCCAAGCCCCCGCCTCCCACTTGAAGCCCCCTCT...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR TCA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACAGAGGAAGATCCTGGGTaGGATTCTCCCTTCAAGGGG +
Preference number: 2 (lower is better)
Translates to: PRILFCEPCTCWHWPQETEEDPG*DSPFKG
Trigger: CCCCTTGAAGGGAGAATCTCACCCAGGATCTTCCTC...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR TCA 90 bp GCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTGCTAGCAGAGGAAGGGACTaGCCCTCTGAGCACACAGTG +
Preference number: 2 (lower is better)
Translates to: AVLEILSPGSFSVNHARASRGRD*PSEHTV
Trigger: CACTGTGTGCTCAGAGGGTCAGTCCCTTCCTCTGCT...AGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR GCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTCACACCGACTGTAAGTaGACAGTCCCCGGATGTCTC +
Preference number: 2 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTHTDCK*TVPGCL
Trigger: GAGACATCCGGGGACTGTGCACTTACAGTCGGTGTG...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR GCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTCCTGGCCTTGTTAGCTaGTGTCCTCCTGCACCCTTA +
Preference number: 2 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTPGLVS*CPPAPL
Trigger: TAAGGGTGCAGGAGGACAGCAGCTAACAAGGCCAGG...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp CTTGTCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCCTCACCGTTAACTGCTaGTCTCCCTCCAAGCCGTCC +
Preference number: 2 (lower is better)
Translates to: LVITLNERKRESSAACLGLTVNC*SPSKPS
Trigger: GGACGGCTTGGAGGGAGACCAGCAGTTAACGGTGAG...GCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCTCTGCAAGTGCAGCCTaGCTGGCTTCTCTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSSASAA*LASLPA
Trigger: GGCTGGGAGAGAAGCCAGCCAGGCTGCACTTGCAGA...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR TCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTGAGGGTGGAGGGAAGTaGGTATTTCCTGGCCTTGTT +
Preference number: 2 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTEGGGK*VFPGLV
Trigger: AACAAGGCCAGGAAATACTCACTTCCCTCCACCCTC...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR TCA 90 bp TTAGGAGCAGGCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCACCCACCACATCCTGTTaGGGGTGGAGGGAAGTGAGT +
Preference number: 2 (lower is better)
Translates to: LGAGGSRDSEPRILFCEPPTTSC*GWREVS
Trigger: ACTCACTTCCCTCCACCCTCAACAGGATGTGGTGGG...TGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGCCTGCTCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR TCA 90 bp GCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTGCTCCTGCTCTGAGAGCATaGGGAGGCTCAAGAGAACTC +
Preference number: 2 (lower is better)
Translates to: AVLEILSPGSFSVNHARAPALRA*GGSREL
Trigger: GAGTTCTCTTGAGCCTCCTCATGCTCTCAGAGCAGG...AGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR GCA 90 bp TTAGGAGCAGGCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATCCCTCACCGTTAACTaGTGGTCTCCCTCCAAGCCG +
Preference number: 2 (lower is better)
Translates to: LGAGGSRDSEPRILFCEPSLTVN*WSPSKP
Trigger: CGGCTTGGAGGGAGACCAGCAGTTAACGGTGAGGGA...TGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGCCTGCTCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp AAGAAAAACACAGCAGAGGAAGGGACTGACCCTCTGAGCACACAGTGGTTGACCGAGAGGCCAAGCCAATaGCTGATACTCCGCAGACCC +
Preference number: 2 (lower is better)
Translates to: KKNTAEEGTDPLSTQWLTERPSQ*LILRRP
Trigger: GGGTCTGCGGAGTATCAGCCATTGGCTTGGCCTCTC...GGTCAACCACTGTGTGCTCAGAGGGTCAGTCCCTTCCTCTGCTGTGTTTTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp AAGAAAAACACAGCAGAGGAAGGGACTGACCCTCTGAGCACACAGTGGTTGACCTCCGGCCTTCTCTGCTaGGGCTTCACACACCCAGTA +
Preference number: 2 (lower is better)
Translates to: KKNTAEEGTDPLSTQWLTSGLLC*GFTHPV
Trigger: TACTGGGTGTGTGAAGCCCCAGCAGAGAAGGCCGGA...GGTCAACCACTGTGTGCTCAGAGGGTCAGTCCCTTCCTCTGCTGTGTTTTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp GCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGCTGGAGAGAGGACATaGGAACAGCGAGCAGCTGTT +
Preference number: 2 (lower is better)
Translates to: AVLEILSPGSFSVNHARAAGERT*EQRAAV
Trigger: AACAGCTGCTCGCTGTTCCCATGTCCTCTCTCCAGC...AGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR TCA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACACAAAGACTGCAAGAGTaGCATTCCACACCGACTGTA +
Preference number: 2 (lower is better)
Translates to: PRILFCEPCTCWHWPQETQRLQE*HSTPTV
Trigger: TACAGTCGGTGTGGAATGTCACTCTTGCAGTCTTTG...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR TCA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCCCTGCTCTGAGAGCATaGGGAGGCTCAAGAGAACTC +
Preference number: 2 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSPALRA*GGSREL
Trigger: GAGTTCTCTTGAGCCTCCTCATGCTCTCAGAGCAGG...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR GCA 90 bp AAGAAAAACACAGCAGAGGAAGGGACTGACCCTCTGAGCACACAGTGGTTGACCAGAGGAGAGGGTAAGTaGACCTACCTCCCTCACCGT +
Preference number: 2 (lower is better)
Translates to: KKNTAEEGTDPLSTQWLTRGEGK*TYLPHR
Trigger: ACGGTGAGGGAGGTAGGTGCACTTACCCTCTCCTCT...GGTCAACCACTGTGTGCTCAGAGGGTCAGTCCCTTCCTCTGCTGTGTTTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR GCA 90 bp TTAGGAGCAGGCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCACACACCGACTGTAAGTaGACAGTCCCCGGATGTCTC +
Preference number: 2 (lower is better)
Translates to: LGAGGSRDSEPRILFCEPHTDCK*TVPGCL
Trigger: GAGACATCCGGGGACTGTGCACTTACAGTCGGTGTG...TGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGCCTGCTCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACAAGAAGACAAGGGGGTTaGGGACTCTCAACCCAAAAA +
Preference number: 2 (lower is better)
Translates to: PRILFCEPCTCWHWPQETRRQGG*GLSTQK
Trigger: TTTTTGGGTTGAGAGTCCCCAACCCCCTTGTCTTCT...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp GCTATTACTCTAAGCCCAGATCCGACCCAGTCGGCACCAAACCACAGGAAGGATTGCAGAAGAACACCCTaGCCCTTAGCCCTGAAAAGG +
Preference number: 2 (lower is better)
Translates to: AITLSPDPTQSAPNHRKDCRRTP*PLALKR
Trigger: CCTTTTCAGGGCTAAGGGCCAGGGTGTTCTTCTGCA...ATCCTTCCTGTGGTTTGGTGCCGACTGGGTCGGATCTGGGCTTAGAGTAATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTGGGCCCAGCTCTTCCTaGGAATTCATGGTCACAAAT +
Preference number: 2 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTGPSSS*EFMVTN
Trigger: ATTTGTGACCATGAATTCCCAGGAAGAGCTGGGCCC...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp AAGAAAAACACAGCAGAGGAAGGGACTGACCCTCTGAGCACACAGTGGTTGACCGGCTCAAGAGAACTCTaGTCAAGCCTTCTGCCCCTC +
Preference number: 2 (lower is better)
Translates to: KKNTAEEGTDPLSTQWLTGSREL*SSLLPL
Trigger: GAGGGGCAGAAGGCTTGACCAGAGTTCTCTTGAGCC...GGTCAACCACTGTGTGCTCAGAGGGTCAGTCCCTTCCTCTGCTGTGTTTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR CAA 90 bp GTGACATTCCACACCGACTGTAAGTGCACAGTCCCCGGATGTCTCTaGTCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCT +
Preference number: 2 (lower is better)
Translates to: VTFHTDCKCTVPGCL*SSPSMRGRGKVLQP
Trigger: AGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGACAAGAGACATCCGGGGACTGTGCACTTACAGTCGGTGTGGAATGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR TCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTTGTCATCACCCTCAATaGGAGGAAGAGGGAAAGTTC +
Preference number: 2 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTCHHPQ*EEEGKF
Trigger: GAACTTTCCCTCTTCCTCTCATTGAGGGTGATGACA...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR TCA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCGAGGGTGGAGGGAAGTaGGTATTTCCTGGCCTTGTT +
Preference number: 2 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSEGGGK*VFPGLV
Trigger: AACAAGGCCAGGAAATACTCACTTCCCTCCACCCTC...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR GCA 90 bp TTAGGAGCAGGCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCAGAAAGTTCTGCAGCCTaGCTTGGCCCTAGTGAGACT +
Preference number: 2 (lower is better)
Translates to: LGAGGSRDSEPRILFCEPESSAA*LGPSET
Trigger: AGTCTCACTAGGGCCAAGGCAGGCTGCAGAACTTTC...TGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGCCTGCTCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR GCA 90 bp TTAGGAGCAGGCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCAGGAATGTTCTGCAAGTaGAGCCTGGCTGGCTTCTCT +
Preference number: 2 (lower is better)
Translates to: LGAGGSRDSEPRILFCEPGMFCK*SLAGFS
Trigger: AGAGAAGCCAGCCAGGCTGCACTTGCAGAACATTCC...TGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGCCTGCTCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR GCA 90 bp AAGAAAAACACAGCAGAGGAAGGGACTGACCCTCTGAGCACACAGTGGTTGACCGGAATGTTCTGCAAGTaGAGCCTGGCTGGCTTCTCT +
Preference number: 2 (lower is better)
Translates to: KKNTAEEGTDPLSTQWLTGMFCK*SLAGFS
Trigger: AGAGAAGCCAGCCAGGCTGCACTTGCAGAACATTCC...GGTCAACCACTGTGTGCTCAGAGGGTCAGTCCCTTCCTCTGCTGTGTTTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR GCA 90 bp CACAATGTCCTTTCACAGTCACTGAGATTAGGTAGCAGAGAAACACAGCAAAGCCCCTCCGGCCTTCTCTaGTGGGGCTTCACACACCCA +
Preference number: 2 (lower is better)
Translates to: HNVLSQSLRLGSRETQQSPSGLL*WGFTHP
Trigger: TGGGTGTGTGAAGCCCCAGCAGAGAAGGCCGGAGGG...GCTTTGCTGTGTTTCTCTGCTACCTAATCTCAGTGACTGTGAAAGGACATTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTAGAAGACAAGGGGGTTaGGGACTCTCAACCCAAAAA +
Preference number: 2 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTRRQGG*GLSTQK
Trigger: TTTTTGGGTTGAGAGTCCCCAACCCCCTTGTCTTCT...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCTGCAGAAGAACACCCTaGCCCTTAGCCCTGAAAAGG +
Preference number: 2 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSCRRTP*PLALKR
Trigger: CCTTTTCAGGGCTAAGGGCCAGGGTGTTCTTCTGCA...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp TCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCCCTACAAAGGGCCACAGGGTaGACACGAGAAAACAACACT +
Preference number: 2 (lower is better)
Translates to: SSPSMRGRGKVLQPALALQRATG*TRENNT
Trigger: AGTGTTGTTTTCTCGTGTCCACCCTGTGGCCCTTTG...TAGGGCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACAAGAAAGGGTGCAGTTTaGTCCTTAGAGAATGGATCC +
Preference number: 2 (lower is better)
Translates to: PRILFCEPCTCWHWPQETRKGAV*SLENGS
Trigger: GGATCCATTCTCTAAGGACCAAACTGCACCCTTTCT...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR TCA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCAGAGAGGAGCAGTATTaGGGAAGATCCTGGGTGAGA +
Preference number: 2 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSREEQY*GRSWVR
Trigger: TCTCACCCAGGATCTTCCTCAATACTGCTCCTCTCT...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR TCA 90 bp GCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTGCTCACCACCTCACTTTCTaGTCTACACTTCCTAGAGGA +
Preference number: 2 (lower is better)
Translates to: AVLEILSPGSFSVNHARAHHLTF*STLPRG
Trigger: TCCTCTAGGAAGTGTAGATCAGAAAGTGAGGTGGTG...AGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR TCA 90 bp GCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTGCTTGTCATCACCCTCAATaGGAGGAAGAGGGAAAGTTC +
Preference number: 2 (lower is better)
Translates to: AVLEILSPGSFSVNHARACHHPQ*EEEGKF
Trigger: GAACTTTCCCTCTTCCTCTCATTGAGGGTGATGACA...AGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR GCA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCTACAAGGGTGTCTTCTaGTCCAAGCCCCCAAAACAG +
Preference number: 2 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSYKGVF*SKPPKQ
Trigger: CTGTTTTGGGGGCTTGGAGCAGAAGACACCCTTGTA...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp TCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCCCTATCTCCTCCTAATGGATaGGAATTAGAGTGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: SSPSMRGRGKVLQPALALSPPNG*ELEWRW
Trigger: CCACCTCCACTCTAATTCCCATCCATTAGGAGGAGA...TAGGGCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp TCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCCCTACAAGAGACACATCAGTaGAAAGTGGGTTCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: SSPSMRGRGKVLQPALALQETHQ*KVGSGS
Trigger: TGACCCAGAACCCACTTTCCACTGATGTGTCTCTTG...TAGGGCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp GCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTGCTCAAGAGACACATCAGTaGAAAGTGGGTTCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: AVLEILSPGSFSVNHARAQETHQ*KVGSGS
Trigger: TGACCCAGAACCCACTTTCCACTGATGTGTCTCTTG...AGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp AAGAAAAACACAGCAGAGGAAGGGACTGACCCTCTGAGCACACAGTGGTTGACCCAAAGGGCCACAGGGTaGACACGAGAAAACAACACT +
Preference number: 2 (lower is better)
Translates to: KKNTAEEGTDPLSTQWLTQRATG*TRENNT
Trigger: AGTGTTGTTTTCTCGTGTCCACCCTGTGGCCCTTTG...GGTCAACCACTGTGTGCTCAGAGGGTCAGTCCCTTCCTCTGCTGTGTTTTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTCTTCCTGGGAATTCATaGTCACAAATCCAGGCAGAA +
Preference number: 2 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTLPGNS*SQIQAE
Trigger: TTCTGCCTGGATTTGTGACCATGAATTCCCAGGAAG...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCGGGCCCAGCTCTTCCTaGGAATTCATGGTCACAAAT +
Preference number: 2 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSGPSSS*EFMVTN
Trigger: ATTTGTGACCATGAATTCCCAGGAAGAGCTGGGCCC...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp TTAGGAGCAGGCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGGAGCCAGTGGCCATaGCAAATGCAACTTCTGAGT +
Preference number: 2 (lower is better)
Translates to: LGAGGSRDSEPRILFCEPWSQWP*QMQLLS
Trigger: ACTCAGAAGTTGCATTTGCCATGGCCACTGGCTCCA...TGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGCCTGCTCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp CATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGGAACTTATCACAGAGGACAGGTGGGGAATaGGGCTTCCTACTCCCTTGG +
Preference number: 2 (lower is better)
Translates to: HQLLDISREVAAHWNLSQRTGGE*GFLLPW
Trigger: CCAAGGGAGTAGGAAGCCCCATTCCCCACCTGTCCT...CTGTGATAAGTTCCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR TCA 90 bp CATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGGAACTTATCACAGGAGGAAGATCCTGGGTaGGATTCTCCCTTCAAGGGG +
Preference number: 2 (lower is better)
Translates to: HQLLDISREVAAHWNLSQEEDPG*DSPFKG
Trigger: CCCCTTGAAGGGAGAATCTCACCCAGGATCTTCCTC...CTGTGATAAGTTCCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR GCA 90 bp GCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCAGAGGAGAGGGTAAGTaGACCTACCTCCCTCACCGT +
Preference number: 2 (lower is better)
Translates to: AASVHDATKVESTEVEMLRGEGK*TYLPHR
Trigger: ACGGTGAGGGAGGTAGGTGCACTTACCCTCTCCTCT...GAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCGTGGAAAGTGGGTTCTaGGTCAATTTCAAGGCATGG +
Preference number: 2 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSVESGF*VNFKAW
Trigger: CCATGCCTTGAAATTGACCCAGAACCCACTTTCCAC...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp GCTATTACTCTAAGCCCAGATCCGACCCAGTCGGCACCAAACCACAGGAAGGATCTTCCTGGGAATTCATaGTCACAAATCCAGGCAGAA +
Preference number: 2 (lower is better)
Translates to: AITLSPDPTQSAPNHRKDLPGNS*SQIQAE
Trigger: TTCTGCCTGGATTTGTGACCATGAATTCCCAGGAAG...ATCCTTCCTGTGGTTTGGTGCCGACTGGGTCGGATCTGGGCTTAGAGTAATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR TCA 90 bp CACAATGTCCTTTCACAGTCACTGAGATTAGGTAGCAGAGAAACACAGCAAAGCTTGGGCCACATAGGGTaGGGGACTGGAAGCACAGAT +
Preference number: 2 (lower is better)
Translates to: HNVLSQSLRLGSRETQQSLGHIG*GTGSTD
Trigger: ATCTGTGCTTCCAGTCCCTCACCCTATGTGGCCCAA...GCTTTGCTGTGTTTCTCTGCTACCTAATCTCAGTGACTGTGAAAGGACATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp TTAGGAGCAGGCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCAGATATCTGCCAGAATTaGCCAAGTTGCCATCAGCTT +
Preference number: 2 (lower is better)
Translates to: LGAGGSRDSEPRILFCEPDICQN*PSCHQL
Trigger: AAGCTGATGGCAACTTGGCCAATTCTGGCAGATATC...TGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGCCTGCTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR TCA 90 bp AAGAAAAACACAGCAGAGGAAGGGACTGACCCTCTGAGCACACAGTGGTTGACCCTTCCAAATAGACCCTaGTCAAATCTAGGTGACAGA +
Preference number: 2 (lower is better)
Translates to: KKNTAEEGTDPLSTQWLTLPNRP*SNLGDR
Trigger: TCTGTCACCTAGATTTGATCAGGGTCTATTTGGAAG...GGTCAACCACTGTGTGCTCAGAGGGTCAGTCCCTTCCTCTGCTGTGTTTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR GCA 90 bp CACAATGTCCTTTCACAGTCACTGAGATTAGGTAGCAGAGAAACACAGCAAAGCGAAAGTTCTGCAGCCTaGCTTGGCCCTAGTGAGACT +
Preference number: 2 (lower is better)
Translates to: HNVLSQSLRLGSRETQQSESSAA*LGPSET
Trigger: AGTCTCACTAGGGCCAAGGCAGGCTGCAGAACTTTC...GCTTTGCTGTGTTTCTCTGCTACCTAATCTCAGTGACTGTGAAAGGACATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp AAGAAAAACACAGCAGAGGAAGGGACTGACCCTCTGAGCACACAGTGGTTGACCCACATCAGTGGAAAGTaGGTTCTGGGTCAATTTCAA +
Preference number: 2 (lower is better)
Translates to: KKNTAEEGTDPLSTQWLTHISGK*VLGQFQ
Trigger: TTGAAATTGACCCAGAACCCACTTTCCACTGATGTG...GGTCAACCACTGTGTGCTCAGAGGGTCAGTCCCTTCCTCTGCTGTGTTTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCAGCACAGATTGTGCATaGAGTGTAAACATTTTCCCC +
Preference number: 2 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSSTDCA*SVNIFP
Trigger: GGGGAAAATGTTTACACTCCATGCACAATCTGTGCT...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp AAGAAAAACACAGCAGAGGAAGGGACTGACCCTCTGAGCACACAGTGGTTGACCAGCACAGATTGTGCATaGAGTGTAAACATTTTCCCC +
Preference number: 2 (lower is better)
Translates to: KKNTAEEGTDPLSTQWLTSTDCA*SVNIFP
Trigger: GGGGAAAATGTTTACACTCCATGCACAATCTGTGCT...GGTCAACCACTGTGTGCTCAGAGGGTCAGTCCCTTCCTCTGCTGTGTTTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp TTGCAAGCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAACTTGGAGGTCAGGATTaGGGTAGGATAGGAGAAGAG +
Preference number: 2 (lower is better)
Translates to: LQAASVHDATKVESTEVELGGQD*GRIGEE
Trigger: CTCTTCTCCTATCCTACCCCAATCCTGACCTCCAAG...TTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGCTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR TCA 90 bp CACAATGTCCTTTCACAGTCACTGAGATTAGGTAGCAGAGAAACACAGCAAAGCCACCACCTCACTTTCTaGTCTACACTTCCTAGAGGA +
Preference number: 2 (lower is better)
Translates to: HNVLSQSLRLGSRETQQSHHLTF*STLPRG
Trigger: TCCTCTAGGAAGTGTAGATCAGAAAGTGAGGTGGTG...GCTTTGCTGTGTTTCTCTGCTACCTAATCTCAGTGACTGTGAAAGGACATTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR GCA 90 bp CATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGGAACTTATCACAGTCACCCAAGAAAGGGTaGAGTTTGGTCCTTAGAGAA +
Preference number: 2 (lower is better)
Translates to: HQLLDISREVAAHWNLSQSPKKG*SLVLRE
Trigger: TTCTCTAAGGACCAAACTGCACCCTTTCTTGGGTGA...CTGTGATAAGTTCCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp TTGCAAGCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAGGATGGGAATTAGAGTaGAGGTGGGCAAAGCAAGAA +
Preference number: 2 (lower is better)
Translates to: LQAASVHDATKVESTEVEGWELE*RWAKQE
Trigger: TTCTTGCTTTGCCCACCTCCACTCTAATTCCCATCC...TTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGCTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp TTGCAAGCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAGTGGAAAGTGGGTTCTaGGTCAATTTCAAGGCATGG +
Preference number: 2 (lower is better)
Translates to: LQAASVHDATKVESTEVEVESGF*VNFKAW
Trigger: CCATGCCTTGAAATTGACCCAGAACCCACTTTCCAC...TTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGCTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR TCA 90 bp CATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGGAACTTATCACAGCTTCCAAATAGACCCTaGTCAAATCTAGGTGACAGA +
Preference number: 2 (lower is better)
Translates to: HQLLDISREVAAHWNLSQLPNRP*SNLGDR
Trigger: TCTGTCACCTAGATTTGATCAGGGTCTATTTGGAAG...CTGTGATAAGTTCCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CCA 90 bp CACAATGTCCTTTCACAGTCACTGAGATTAGGTAGCAGAGAAACACAGCAAAGCCACATCAGTGGAAAGTaGGTTCTGGGTCAATTTCAA +
Preference number: 2 (lower is better)
Translates to: HNVLSQSLRLGSRETQQSHISGK*VLGQFQ
Trigger: TTGAAATTGACCCAGAACCCACTTTCCACTGATGTG...GCTTTGCTGTGTTTCTCTGCTACCTAATCTCAGTGACTGTGAAAGGACATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR GCA 72 bp CAGCCCAGGCACCCAAGCCCTCCCTCCGGCCTTCTCTaGTGGGGCTTCACACACCCAGTACAGAGCAGGGAA +
Preference number: 3 (lower is better)
Translates to: QPRHPSPPSGLL*WGFTHPVQSRE
Trigger: TTCCCTGCTCTGTACTGGGTGTGTGAAGCCCCAGCAGAGAAGGCCGGAGGGAGGGCTTGGGTGCCTGGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR GCA 72 bp GAGAGGGTAAGTGCACCTACCTCCCTCACCGTTAACTaGTGGTCTCCCTCCAAGCCGTCCTCACCCCAGGGT +
Preference number: 3 (lower is better)
Translates to: ERVSAPTSLTVN*WSPSKPSSPQG
Trigger: ACCCTGGGGTGAGGACGGCTTGGAGGGAGACCAGCAGTTAACGGTGAGGGAGGTAGGTGCACTTACCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR CCA 72 bp AGGGTAAGTGCACCTACCTCCCTCACCGTTAACTGCTaGTCTCCCTCCAAGCCGTCCTCACCCCAGGGTGCA +
Preference number: 3 (lower is better)
Translates to: RVSAPTSLTVNC*SPSKPSSPQGA
Trigger: TGCACCCTGGGGTGAGGACGGCTTGGAGGGAGACCAGCAGTTAACGGTGAGGGAGGTAGGTGCACTTACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR CCA 72 bp GTGCTGGCACTGGCCTCAGGAGACAGTGCCCTGCCTTaGCTGTCAGGTCCACGGAGAAATCTCAGGTTTGCC +
Preference number: 3 (lower is better)
Translates to: VLALASGDSALP*LSGPRRNLRFA
Trigger: GGCAAACCTGAGATTTCTCCGTGGACCTGACAGCCAAGGCAGGGCACTGTCTCCTGAGGCCAGTGCCAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CAA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTCCCCACCACATCCTGTaGAGGGTGGAGGGAAGTGAG +
Preference number: 3 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTPHHIL*RVEGSE
Trigger: CTCACTTCCCTCCACCCTCAACAGGATGTGGTGGGG...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR TCA 72 bp TGTTGGTACCCACCCAGGGCCCAGGCCCCAGAACCTTaGGTACAATCAAAGGGAGAGGAGAGGAGTCAGTGG +
Preference number: 3 (lower is better)
Translates to: CWYPPRAQAPEP*VQSKGEERSQW
Trigger: CCACTGACTCCTCTCCTCTCCCTTTGATTGTACTCAAGGTTCTGGGGCCTGGGCCCTGGGTGGGTACCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR GCA 72 bp TCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTaGTGGCACTGGCCTCAGGAGACAGTGCCCTGCCTT +
Preference number: 3 (lower is better)
Translates to: SEPRILFCEPCT*WHWPQETVPCL
Trigger: AAGGCAGGGCACTGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR GCA 72 bp CGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATaGACGTGCTGGCACTGGCCTCAGGAGACAGTGCCC +
Preference number: 3 (lower is better)
Translates to: RDSEPRILFCEP*TCWHWPQETVP
Trigger: GGGCACTGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR CCA 72 bp AGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTaGCCTCAGGAGACAGTGCCCTGCCTTGGCTGTCAG +
Preference number: 3 (lower is better)
Translates to: RILFCEPCTCWH*PQETVPCLGCQ
Trigger: CTGACAGCCAAGGCAGGGCACTGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR GCA 72 bp GCCTTGGCTGTCAGGTCCACGGAGAAATCTCAGGTTTaGCCCTTCACTAGGGATGCCCTAGAAAGCAAGGGC +
Preference number: 3 (lower is better)
Translates to: ALAVRSTEKSQV*PFTRDALESKG
Trigger: GCCCTTGCTTTCTAGGGCATCCCTAGTGAAGGGGCAAACCTGAGATTTCTCCGTGGACCTGACAGCCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR CCA 72 bp CAAGCCGTCCTCACCCCAGGGTGCAGAAGAACACCCTaGCCCTTAGCCCTGAAAAGGGTTACCTCTTCCAAA +
Preference number: 3 (lower is better)
Translates to: QAVLTPGCRRTP*PLALKRVTSSK
Trigger: TTTGGAAGAGGTAACCCTTTTCAGGGCTAAGGGCCAGGGTGTTCTTCTGCACCCTGGGGTGAGGACGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CAA 90 bp TTAGGAGCAGGCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCACCCCACCACATCCTGTaGAGGGTGGAGGGAAGTGAG +
Preference number: 3 (lower is better)
Translates to: LGAGGSRDSEPRILFCEPPHHIL*RVEGSE
Trigger: CTCACTTCCCTCCACCCTCAACAGGATGTGGTGGGG...TGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGCCTGCTCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR TCA 72 bp TCACCCCCACCACATCCTGTTGAGGGTGGAGGGAAGTaGGTATTTCCTGGCCTTGTTAGCTGCTGTCCTCCT +
Preference number: 3 (lower is better)
Translates to: SPPPHPVEGGGK*VFPGLVSCCPP
Trigger: AGGAGGACAGCAGCTAACAAGGCCAGGAAATACTCACTTCCCTCCACCCTCAACAGGATGTGGTGGGGGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CAA 90 bp AAGAAAAACACAGCAGAGGAAGGGACTGACCCTCTGAGCACACAGTGGTTGACCCAGATCTCCTACCCATaGCAAAGGGCCACAGGGTGG +
Preference number: 3 (lower is better)
Translates to: KKNTAEEGTDPLSTQWLTQISYP*QRATGW
Trigger: CCACCCTGTGGCCCTTTGCAATGGGTAGGAGATCTG...GGTCAACCACTGTGTGCTCAGAGGGTCAGTCCCTTCCTCTGCTGTGTTTTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CAA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTGTCCCCGGATGTCTCTaGTCATCACCCTCAATGAGA +
Preference number: 3 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTVPGCL*SSPSMR
Trigger: TCTCATTGAGGGTGATGACAAGAGACATCCGGGGAC...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR CCA 72 bp CTGGGGCTGAACTGGGGGCCTGATATCTGCCAGAATTaGCCAAGTTGCCATCAGCTTCTTGACATATCCAGG +
Preference number: 3 (lower is better)
Translates to: LGLNWGPDICQN*PSCHQLLDISR
Trigger: CCTGGATATGTCAAGAAGCTGATGGCAACTTGGCCAATTCTGGCAGATATCAGGCCCCCAGTTCAGCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CAA 90 bp GCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGAGTATTTCCTGGCCTaGTTAGCTGCTGTCCTCCTG +
Preference number: 3 (lower is better)
Translates to: AVLEILSPGSFSVNHARAEYFLA*LAAVLL
Trigger: CAGGAGGACAGCAGCTAACAAGGCCAGGAAATACTC...AGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CAA 90 bp AAGAAAAACACAGCAGAGGAAGGGACTGACCCTCTGAGCACACAGTGGTTGACCTTAACGGCCAGTGACTaGGCACTTCTGACCCTCCCT +
Preference number: 3 (lower is better)
Translates to: KKNTAEEGTDPLSTQWLTLTASD*ALLTLP
Trigger: AGGGAGGGTCAGAAGTGCCAAGTCACTGGCCGTTAA...GGTCAACCACTGTGTGCTCAGAGGGTCAGTCCCTTCCTCTGCTGTGTTTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR GCA 72 bp ACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTaGCTTGGCCCTAGTGAGACTCTTAACCAGACCAGA +
Preference number: 3 (lower is better)
Translates to: TLNERKRESSAA*LGPSETLNQTR
Trigger: TCTGGTCTGGTTAAGAGTCTCACTAGGGCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CAA 90 bp GCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTGCTAAGAGAGGAGCAGTATaGAGGAAGATCCTGGGTGAG +
Preference number: 3 (lower is better)
Translates to: AVLEILSPGSFSVNHARAKRGAV*RKILGE
Trigger: CTCACCCAGGATCTTCCTCAATACTGCTCCTCTCTT...AGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CAA 90 bp GCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCAGAGGTACCAGCCCCTaGGAGGTCAGGATTGGGGTA +
Preference number: 3 (lower is better)
Translates to: AASVHDATKVESTEVEMLRGTSP*EVRIGV
Trigger: TACCCCAATCCTGACCTCCAAGGGGCTGGTACCTCT...GAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CAA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTAAGAAAGGGTGCAGTTaGGTCCTTAGAGAATGGATC +
Preference number: 3 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTKKGCS*VLREWI
Trigger: GATCCATTCTCTAAGGACCAAACTGCACCCTTTCTT...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR TCA 72 bp TGGAGTGTAAACATTTTCCCCCGCTGTTCCCTGCTCTaGGAGCATGAGGAGGCTCAAGAGAACTCTGGTCAA +
Preference number: 3 (lower is better)
Translates to: WSVNIFPRCSLL*EHEEAQENSGQ
Trigger: TTGACCAGAGTTCTCTTGAGCCTCCTCATGCTCTCAGAGCAGGGAACAGCGGGGGAAAATGTTTACACTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR TCA 72 bp AGTGTGAAATCCAGCCAGCTATTGGGCCACATAGGGTaGGGGACTGGAAGCACAGATTGTGCATGGAGTGTA +
Preference number: 3 (lower is better)
Translates to: SVKSSQLLGHIG*GTGSTDCAWSV
Trigger: TACACTCCATGCACAATCTGTGCTTCCAGTCCCTCACCCTATGTGGCCCAATAGCTGGCTGGATTTCACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR GCA 72 bp CACGGAGGTAGAAATGCTCACTCACCCAAGAAAGGGTaGAGTTTGGTCCTTAGAGAATGGATCCCCTCCTCT +
Preference number: 3 (lower is better)
Translates to: HGGRNAHSPKKG*SLVLREWIPSS
Trigger: AGAGGAGGGGATCCATTCTCTAAGGACCAAACTGCACCCTTTCTTGGGTGAGTGAGCATTTCTACCTCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR GCA 72 bp AAGACTGCAAGAGTGACATTCCACACCGACTGTAAGTaGACAGTCCCCGGATGTCTCTTGTCATCACCCTCA +
Preference number: 3 (lower is better)
Translates to: KTARVTFHTDCK*TVPGCLLSSPS
Trigger: TGAGGGTGATGACAAGAGACATCCGGGGACTGTGCACTTACAGTCGGTGTGGAATGTCACTCTTGCAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR GCA 72 bp AACTGGGGGCCTGATATCTGCCAGAATTGGCCAAGTTaGCATCAGCTTCTTGACATATCCAGGGAAGTGGCA +
Preference number: 3 (lower is better)
Translates to: NWGPDICQNWPS*HQLLDISREVA
Trigger: TGCCACTTCCCTGGATATGTCAAGAAGCTGATGGCAACTTGGCCAATTCTGGCAGATATCAGGCCCCCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR CCA 72 bp GTAGAAATGCTCACTCACCCAAGAAAGGGTGCAGTTTaGTCCTTAGAGAATGGATCCCCTCCTCTCCCTGAG +
Preference number: 3 (lower is better)
Translates to: VEMLTHPRKGAV*SLENGSPPLPE
Trigger: CTCAGGGAGAGGAGGGGATCCATTCTCTAAGGACCAAACTGCACCCTTTCTTGGGTGAGTGAGCATTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CAA 90 bp TCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCACTCACAGAGGTACCAGCCCCTaGGAGGTCAGGATTGGGGTA +
Preference number: 3 (lower is better)
Translates to: SVHDATKVESTEVEMLTHRGTSP*EVRIGV
Trigger: TACCCCAATCCTGACCTCCAAGGGGCTGGTACCTCT...GTGAGTGAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CAA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCGACTGGAAGCACAGATaGTGCATGGAGTGTAAACAT +
Preference number: 3 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSDWKHR*CMECKH
Trigger: ATGTTTACACTCCATGCACAATCTGTGCTTCCAGTC...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR CCA 72 bp ACACTGGCACCAAACCCCAGCTGGAGCCAGTGGCCATaGCAAATGCAACTTCTGAGTATTTTGTCTTCATTT +
Preference number: 3 (lower is better)
Translates to: TLAPNPSWSQWP*QMQLLSILSSF
Trigger: AAATGAAGACAAAATACTCAGAAGTTGCATTTGCCATGGCCACTGGCTCCAGCTGGGGTTTGGTGCCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR CCA 72 bp ATCCAGCCAGCTATTGGGCCACATAGGGTGAGGGACTaGAAGCACAGATTGTGCATGGAGTGTAAACATTTT +
Preference number: 3 (lower is better)
Translates to: IQPAIGPHRVRD*KHRLCMECKHF
Trigger: AAAATGTTTACACTCCATGCACAATCTGTGCTTCCAGTCCCTCACCCTATGTGGCCCAATAGCTGGCTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CAA 90 bp GCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTGCTACAGAGACATACACTTaGTATCTATCACCTGGAAGA +
Preference number: 3 (lower is better)
Translates to: AVLEILSPGSFSVNHARATETYT*YLSPGR
Trigger: TCTTCCAGGTGATAGATACAAAGTGTATGTCTCTGT...AGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CAA 90 bp TCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCACTCACAAGAGAGGAGCAGTATaGAGGAAGATCCTGGGTGAG +
Preference number: 3 (lower is better)
Translates to: SVHDATKVESTEVEMLTHKRGAV*RKILGE
Trigger: CTCACCCAGGATCTTCCTCAATACTGCTCCTCTCTT...GTGAGTGAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CAA 90 bp GCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCAAGAAAGGGTGCAGTTaGGTCCTTAGAGAATGGATC +
Preference number: 3 (lower is better)
Translates to: AASVHDATKVESTEVEMLKKGCS*VLREWI
Trigger: GATCCATTCTCTAAGGACCAAACTGCACCCTTTCTT...GAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CAA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCTTTTGTCTTCATTTTTaGCAAGCAGCATCAGTGCAT +
Preference number: 3 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSFCLHF*QAASVH
Trigger: ATGCACTGATGCTGCTTGCAAAAAATGAAGACAAAA...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR CCA 72 bp ATCTATCACCTGGAAGAAATCCAAGAGACACATCAGTaGAAAGTGGGTTCTGGGTCAATTTCAAGGCATGGG +
Preference number: 3 (lower is better)
Translates to: IYHLEEIQETHQ*KVGSGSISRHG
Trigger: CCCATGCCTTGAAATTGACCCAGAACCCACTTTCCACTGATGTGTCTCTTGGATTTCTTCCAGGTGATAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR-3UTR CAA 90 bp CATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGGAACTTATCACAGACAGAGACATACACTTaGTATCTATCACCTGGAAGA +
Preference number: 3 (lower is better)
Translates to: HQLLDISREVAAHWNLSQTETYT*YLSPGR
Trigger: TCTTCCAGGTGATAGATACAAAGTGTATGTCTCTGT...CTGTGATAAGTTCCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACAGCGCGCCCGCCTCGCTaGTGGCCCGCACCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: PRILFCEPCTCWHWPQETARPPR*WPAPSC
Trigger: ACAGCTTGGTGCGGGCCATCAGCGAGGCGGGCGCGC...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CCGTTAACTGCTGGTCTCCCTCCAAGCCGTCCTCACCCCAGGGTGCAGAAGAACCTGCGGCCGCGGCGTTaGGCTCGTAGAGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: PLTAGLPPSRPHPRVQKNLRPRR*ARRARA
Trigger: TGCTCTGGCTCTACGAGCTCAACGCCGCGGCCGCAG...GTTCTTCTGCACCCTGGGGTGAGGACGGCTTGGAGGGAGACCAGCAGTTAACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTGCGCGCCCGCCTCGCTaGTGGCCCGCACCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTARPPR*WPAPSC
Trigger: ACAGCTTGGTGCGGGCCATCAGCGAGGCGGGCGCGC...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACAGGCGGCGCGGCGTGGTaGTGGTGCAGGTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: PRILFCEPCTCWHWPQETGGAAW*WCRWWL
Trigger: CAACCACCACCTGCACCACCACCACGCCGCGCCGCC...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS-3UTR TCA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACAGGAGGAGGTGGCCGCTaGGGAGGAGAAGGCGACAGG +
Preference number: 4 (lower is better)
Translates to: PRILFCEPCTCWHWPQETGGGGR*GGEGDR
Trigger: CCTGTCGCCTTCTCCTCCTCAGCGGCCACCTCCTCC...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS-3UTR TCA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACACCGACAGCGCCATGGTaGGACGGAAGCCCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PRILFCEPCTCWHWPQETPTAPW*DGSPWC
Trigger: GCACCACGGGCTTCCGTCTCACCATGGCGCTGTCGG...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTTCGGGGAGGCCCGATTaGCCCGGTCCCAGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTSGRPD*PGPSSP
Trigger: AGGGCTGCTGGGACCGGGGCAATCGGGCCTCCCCGA...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp CCGTTAACTGCTGGTCTCCCTCCAAGCCGTCCTCACCCCAGGGTGCAGAAGAACCCTCGTTCTCCGAGATaGAGTGGCCCAGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PLTAGLPPSRPHPRVQKNPRSPR*SGPAGS
Trigger: GCTCCCAGCTGGGCCACTGCATCTCGGAGAACGAGG...GTTCTTCTGCACCCTGGGGTGAGGACGGCTTGGAGGGAGACCAGCAGTTAACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp GCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTGCTCCGGACTGGAGCCACTaGACTGGGCGAGCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: AVLEILSPGSFSVNHARAPDWSH*TGRAGP
Trigger: CGGCCCGGCTCGCCCAGTCCAGTGGCTCCAGTCCGG...AGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTGAGACCGAGCGAGGGTaGCCGAGCGCCGGGCGCATT +
Preference number: 4 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTETERG*PSAGRI
Trigger: AATGCGCCCGGCGCTCGGCCACCCTCGCTCGGTCTC...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS-3UTR CCA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACAGGCGCGGCGTGGTGGTaGTGCAGGTGGTGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: PRILFCEPCTCWHWPQETGAAWW*CRWWLC
Trigger: GCACAACCACCACCTGCACCACCACCACGCCGCGCC...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS-3UTR CCA 90 bp CTTGTCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCAGGGGCGGCGCGGCGTaGTGGTGGTGCAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LVITLNERKRESSAACLGRGGAA*WWCRWW
Trigger: CCACCACCTGCACCACCACCACGCCGCGCCGCCCCT...GCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS-3UTR CCA 90 bp GCTATTACTCTAAGCCCAGATCCGACCCAGTCGGCACCAAACCACAGGAAGGATTGGTGGCGGAGGTGGTaGAGGGGCGGAGGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: AITLSPDPTQSAPNHRKDWWRRW*RGGGRS
Trigger: GCTCCGCCCTCCGCCCCTCCACCACCTCCGCCACCA...ATCCTTCCTGTGGTTTGGTGCCGACTGGGTCGGATCTGGGCTTAGAGTAATAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACAAGGATCAGCACCACCTaGGCCGGGCGGCGGCGAGAT +
Preference number: 4 (lower is better)
Translates to: PRILFCEPCTCWHWPQETRISTT*AGRRRD
Trigger: ATCTCGCCGCCGCCCGGCCCAGGTGGTGCTGATCCT...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399875.1
CDS-3UTR TCA 90 bp AAGAAAAACACAGCAGAGGAAGGGACTGACCCTCTGAGCACACAGTGGTTGACCAGAGGGGGCAGGCGGTaGACCGAGCGGACCGCGGTG +
Preference number: 4 (lower is better)
Translates to: KKNTAEEGTDPLSTQWLTRGGRR*TERTAV
Trigger: CACCGCGGTCCGCTCGGTTCACCGCCTGCCCCCTCT...GGTCAACCACTGTGTGCTCAGAGGGTCAGTCCCTTCCTCTGCTGTGTTTTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTCTGCGGCCGCGGCGTTaGGCTCGTAGAGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTLRPRR*ARRARA
Trigger: TGCTCTGGCTCTACGAGCTCAACGCCGCGGCCGCAG...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CCGTTAACTGCTGGTCTCCCTCCAAGCCGTCCTCACCCCAGGGTGCAGAAGAACCCACAGCCAGGGTGTTaGCATAGCCATGAGCACCCC +
Preference number: 4 (lower is better)
Translates to: PLTAGLPPSRPHPRVQKNPQPGC*HSHEHP
Trigger: GGGGTGCTCATGGCTATGTCAACACCCTGGCTGTGG...GTTCTTCTGCACCCTGGGGTGAGGACGGCTTGGAGGGAGACCAGCAGTTAACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp GCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTGCTCGCGGCTGGTGCTGGTaGTGGTGCTGCTGTCGCCGG +
Preference number: 4 (lower is better)
Translates to: AVLEILSPGSFSVNHARARGWCW*WCCCRR
Trigger: CCGGCGACAGCAGCACCAGCACCAGCACCAGCCGCG...AGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS-3UTR CCA 90 bp CCATTGCAAAGGGCCACAGGGTGGACACGAGAAAACAACACTACACACACAGAGCCGGACTGGAGCCACTaGACTGGGCGAGCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: PLQRATGWTRENNTTHTEPDWSH*TGRAGP
Trigger: CGGCCCGGCTCGCCCAGTCCAGTGGCTCCAGTCCGG...CTCTGTGTGTGTAGTGTTGTTTTCTCGTGTCCACCCTGTGGCCCTTTGCAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp AAGAAAAACACAGCAGAGGAAGGGACTGACCCTCTGAGCACACAGTGGTTGACCGTGGGGACTCGCACCTaGGCCGGGCGGCGGCGAGAT +
Preference number: 4 (lower is better)
Translates to: KKNTAEEGTDPLSTQWLTVGTRT*AGRRRD
Trigger: ATCTCGCCGCCGCCCGGCCCAGGTGCGAGTCCCCAC...GGTCAACCACTGTGTGCTCAGAGGGTCAGTCCCTTCCTCTGCTGTGTTTTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS-3UTR CCA 90 bp AAGAAAAACACAGCAGAGGAAGGGACTGACCCTCTGAGCACACAGTGGTTGACCCACCGTAGCCCCCTCTaGCCCGACTCGGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: KKNTAEEGTDPLSTQWLTHRSPL*PDSGRP
Trigger: GGGCCTCCCCGAGTCGGGCCAGAGGGGGCTACGGTG...GGTCAACCACTGTGTGCTCAGAGGGTCAGTCCCTTCCTCTGCTGTGTTTTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCTGGTGGCGGAGGTGGTaGAGGGGCGGAGGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSWWRRW*RGGGRS
Trigger: GCTCCGCCCTCCGCCCCTCCACCACCTCCGCCACCA...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTGGAGCCTCCCTGAGGTaGTGGCGGAGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTGASLR*WRRWWR
Trigger: CCTCCACCACCTCCGCCACCACCTCAGGGAGGCTCC...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACAAGAGGGGGCTTCAAGTaGGAGGCGGGGGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PRILFCEPCTCWHWPQETRGGFK*EAGAWP
Trigger: AGGCCAAGCCCCCGCCTCCCACTTGAAGCCCCCTCT...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR CAA 72 bp GGGCTTGGCCTGGGTGCTGAGTTAACGGCCAGTGACTaGGCACTTCTGACCCTCCCTGTGCACTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GLGLGAELTASD*ALLTLPVHSAA
Trigger: AGCTGCAGAGTGCACAGGGAGGGTCAGAAGTGCCAAGTCACTGGCCGTTAACTCAGCACCCAGGCCAAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
3UTR CAA 72 bp CGTGCTGGCACTGGCCTCAGGAGACAGTGCCCTGCCTaGGCTGTCAGGTCCACGGAGAAATCTCAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: RAGTGLRRQCPA*AVRSTEKSQVC
Trigger: GCAAACCTGAGATTTCTCCGTGGACCTGACAGCCAAGGCAGGGCACTGTCTCCTGAGGCCAGTGCCAGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp TCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCCCTAGACGGAAGCCCGTGGTaGCGAAGGGCGCGCGTAGCT +
Preference number: 4 (lower is better)
Translates to: SSPSMRGRGKVLQPALALDGSPW*RRARVA
Trigger: AGCTACGCGCGCCCTTCGGCACCACGGGCTTCCGTC...TAGGGCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTGCAGGTCCAAGCACGTaGCCAGGAAGCATCCGGCCG +
Preference number: 4 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTAGPST*PGSIRP
Trigger: CGGCCGGATGCTTCCTGGGCACGTGCTTGGACCTGC...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp CCATTGCAAAGGGCCACAGGGTGGACACGAGAAAACAACACTACACACACAGAGCCAGGATGCAGCCGCTaGGGCCGCGGCGTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: PLQRATGWTRENNTTHTEPGCSR*GRGVEL
Trigger: GAGCTCAACGCCGCGGCCGCAGCGGCTGCATCCTGG...CTCTGTGTGTGTAGTGTTGTTTTCTCGTGTCCACCCTGTGGCCCTTTGCAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp TTAGGAGCAGGCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATCGGGGAGGCCCGATTaGCCCGGTCCCAGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LGAGGSRDSEPRILFCEPSGRPD*PGPSSP
Trigger: AGGGCTGCTGGGACCGGGGCAATCGGGCCTCCCCGA...TGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGCCTGCTCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTTGCACTCTGCAGCTGTaGCAGGCCCTGCCCCACACC +
Preference number: 4 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTCTLQL*QALPHT
Trigger: GGTGTGGGGCAGGGCCTGGCACAGCTGCAGAGTGCA...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACAGGCCTCAGGAGACAGTaGCCTGCCTTGGCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: PRILFCEPCTCWHWPQETGLRRQ*PALAVR
Trigger: CCTGACAGCCAAGGCAGGGCACTGTCTCCTGAGGCC...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCCCTAGGCTGGTGCTGGTGCTaGTGCTGCTGTCGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SSPSMRGRGKVLQPALALGWCWC*CCCRRS
Trigger: GCTCCGGCGACAGCAGCACCAGCACCAGCACCAGCC...TAGGGCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS-3UTR CCA 90 bp CTTGTCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCAGGTGGGCGTGGAGGTaGAGGAGGAGGTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: LVITLNERKRESSAACLGRWAWR*RRRWPL
Trigger: CAGCGGCCACCTCCTCCTCCACCTCCACGCCCACCT...GCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS-3UTR CCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTTGGTGGTGGTGCAGGTaGTGGTTGTGCGCGCCGCTG +
Preference number: 4 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTWWWCR*WLCAPL
Trigger: CAGCGGCGCGCACAACCACCACCTGCACCACCACCA...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS-3UTR CCA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACATTCAAGGGGAGTACCTaGGCAGCTCCCAGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: PRILFCEPCTCWHWPQETFKGST*AAPRGP
Trigger: TGGGCCCCTGGGAGCTGCCCAGGTACTCCCCTTGAA...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp TTAGGAGCAGGCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCACCGACAGCGCCATGGTaGGACGGAAGCCCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LGAGGSRDSEPRILFCEPPTAPW*DGSPWC
Trigger: GCACCACGGGCTTCCGTCTCACCATGGCGCTGTCGG...TGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGCCTGCTCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp AAGAAAAACACAGCAGAGGAAGGGACTGACCCTCTGAGCACACAGTGGTTGACCCCGCGGCTGTCATGCTaGAGGAGGAGGTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: KKNTAEEGTDPLSTQWLTPRLSC*RRRWAW
Trigger: CCACGCCCACCTCCTCCTGCAGCATGACAGCCGCGG...GGTCAACCACTGTGTGCTCAGAGGGTCAGTCCCTTCCTCTGCTGTGTTTTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS-3UTR GCA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCGACGGAAGCCCGTGGTaGCGAAGGGCGCGCGTAGCT +
Preference number: 4 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSDGSPW*RRARVA
Trigger: AGCTACGCGCGCCCTTCGGCACCACGGGCTTCCGTC...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp GCTATTACTCTAAGCCCAGATCCGACCCAGTCGGCACCAAACCACAGGAAGGATGCAGGTCCAAGCACGTaGCCAGGAAGCATCCGGCCG +
Preference number: 4 (lower is better)
Translates to: AITLSPDPTQSAPNHRKDAGPST*PGSIRP
Trigger: CGGCCGGATGCTTCCTGGGCACGTGCTTGGACCTGC...ATCCTTCCTGTGGTTTGGTGCCGACTGGGTCGGATCTGGGCTTAGAGTAATAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp CCGTTAACTGCTGGTCTCCCTCCAAGCCGTCCTCACCCCAGGGTGCAGAAGAACCCTGGCCTTGTTAGCTaGTGTCCTCCTGCACCCTTA +
Preference number: 4 (lower is better)
Translates to: PLTAGLPPSRPHPRVQKNPGLVS*CPPAPL
Trigger: TAAGGGTGCAGGAGGACAGCAGCTAACAAGGCCAGG...GTTCTTCTGCACCCTGGGGTGAGGACGGCTTGGAGGGAGACCAGCAGTTAACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCCCTACGGCGAGATCCGGACTaGAGCCACTGGACTGGGCGA +
Preference number: 4 (lower is better)
Translates to: SSPSMRGRGKVLQPALALRRDPD*SHWTGR
Trigger: TCGCCCAGTCCAGTGGCTCCAGTCCGGATCTCGCCG...TAGGGCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TTAGGAGCAGGCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCAGGAGCCTCCCTGAGGTaGTGGCGGAGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LGAGGSRDSEPRILFCEPGASLR*WRRWWR
Trigger: CCTCCACCACCTCCGCCACCACCTCAGGGAGGCTCC...TGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGCCTGCTCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp GCTATTACTCTAAGCCCAGATCCGACCCAGTCGGCACCAAACCACAGGAAGGATAGAGGGGGCTTCAAGTaGGAGGCGGGGGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: AITLSPDPTQSAPNHRKDRGGFK*EAGAWP
Trigger: AGGCCAAGCCCCCGCCTCCCACTTGAAGCCCCCTCT...ATCCTTCCTGTGGTTTGGTGCCGACTGGGTCGGATCTGGGCTTAGAGTAATAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTTGCACGTGCTGGCACTaGCCTCAGGAGACAGTGCCC +
Preference number: 4 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTCTCWH*PQETVP
Trigger: GGGCACTGTCTCCTGAGGCCAGTGCCAGCACGTGCA...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CCGTTAACTGCTGGTCTCCCTCCAAGCCGTCCTCACCCCAGGGTGCAGAAGAACCAGGATCCTTTTCTGTaGACCATGCACGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PLTAGLPPSRPHPRVQKNQDPFL*TMHVLA
Trigger: TGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTG...GTTCTTCTGCACCCTGGGGTGAGGACGGCTTGGAGGGAGACCAGCAGTTAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CCGTTAACTGCTGGTCTCCCTCCAAGCCGTCCTCACCCCAGGGTGCAGAAGAACCGGTTCTCGAGATTCTaGGCCCAGGATCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: PLTAGLPPSRPHPRVQKNRFSRF*AQDPFL
Trigger: CAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCG...GTTCTTCTGCACCCTGGGGTGAGGACGGCTTGGAGGGAGACCAGCAGTTAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp GCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCCGGTGCCGCTGGGGCTaGAGCAGCAGGGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: AASVHDATKVESTEVEMLRCRWG*SSRGPA
Trigger: GGCAGGACCCCTGCTGCTGCAGCCCCAGCGGCACCG...GAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp CTTGTCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCCCTCGTTCTCCGAGATaGAGTGGCCCAGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: LVITLNERKRESSAACLGPRSPR*SGPAGS
Trigger: GCTCCCAGCTGGGCCACTGCATCTCGGAGAACGAGG...GCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp GCTATTACTCTAAGCCCAGATCCGACCCAGTCGGCACCAAACCACAGGAAGGATCCCTCCGGCCTTCTCTaGTGGGGCTTCACACACCCA +
Preference number: 4 (lower is better)
Translates to: AITLSPDPTQSAPNHRKDPSGLL*WGFTHP
Trigger: TGGGTGTGTGAAGCCCCAGCAGAGAAGGCCGGAGGG...ATCCTTCCTGTGGTTTGGTGCCGACTGGGTCGGATCTGGGCTTAGAGTAATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACATCTTGGCGAAGAAGATaGCCCAGCCCACCACCACCA +
Preference number: 4 (lower is better)
Translates to: PRILFCEPCTCWHWPQETSWRRR*PSPPPP
Trigger: TGGTGGTGGTGGGCTGGGCCATCTTCTTCGCCAAGA...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS-3UTR CCA 90 bp CATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGGAACTTATCACAGCACCGTAGCCCCCTCTaGCCCGACTCGGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: HQLLDISREVAAHWNLSQHRSPL*PDSGRP
Trigger: GGGCCTCCCCGAGTCGGGCCAGAGGGGGCTACGGTG...CTGTGATAAGTTCCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CTTGTCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCTTCTCCGAGATGCAGTaGCCCAGCTGGGAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LVITLNERKRESSAACLGFSEMQ*PSWEPP
Trigger: GGGAGGCTCCCAGCTGGGCCACTGCATCTCGGAGAA...GCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACATCCGGCCTTCTCTGCTaGGGCTTCACACACCCAGTA +
Preference number: 4 (lower is better)
Translates to: PRILFCEPCTCWHWPQETSGLLC*GFTHPV
Trigger: TACTGGGTGTGTGAAGCCCCAGCAGAGAAGGCCGGA...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCCCTAACAGCGAGCAGCTGTTaGTACCCACCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SSPSMRGRGKVLQPALALTASSC*YPPRAQ
Trigger: CTGGGCCCTGGGTGGGTACCAACAGCTGCTCGCTGT...TAGGGCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp TCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCACTCACAGAGGGGGCAGGCGGTaGACCGAGCGGACCGCGGTG +
Preference number: 4 (lower is better)
Translates to: SVHDATKVESTEVEMLTHRGGRR*TERTAV
Trigger: CACCGCGGTCCGCTCGGTTCACCGCCTGCCCCCTCT...GTGAGTGAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp TTAGGAGCAGGCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCAGCGCGCGTAGCTCGATaGGGTCTAGGATGGACGTGC +
Preference number: 4 (lower is better)
Translates to: LGAGGSRDSEPRILFCEPARVAR*GLGWTC
Trigger: GCACGTCCATCCTAGACCTCATCGAGCTACGCGCGC...TGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGCCTGCTCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp GCTATTACTCTAAGCCCAGATCCGACCCAGTCGGCACCAAACCACAGGAAGGATTCAGCTCCACCAGCGTaGAGCTGTCGAGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: AITLSPDPTQSAPNHRKDSAPPA*SCRAGP
Trigger: TGGACCTGCTCGACAGCTTCACGCTGGTGGAGCTGA...ATCCTTCCTGTGGTTTGGTGCCGACTGGGTCGGATCTGGGCTTAGAGTAATAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CCGTTAACTGCTGGTCTCCCTCCAAGCCGTCCTCACCCCAGGGTGCAGAAGAACAGAGAGGAGCAGTATTaGGGAAGATCCTGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: PLTAGLPPSRPHPRVQKNREEQY*GRSWVR
Trigger: TCTCACCCAGGATCTTCCTCAATACTGCTCCTCTCT...GTTCTTCTGCACCCTGGGGTGAGGACGGCTTGGAGGGAGACCAGCAGTTAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp TTGCAAGCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAACGGTGCCGCTGGGGCTaGAGCAGCAGGGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LQAASVHDATKVESTEVERCRWG*SSRGPA
Trigger: GGCAGGACCCCTGCTGCTGCAGCCCCAGCGGCACCG...TTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGCTTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp CCGTTAACTGCTGGTCTCCCTCCAAGCCGTCCTCACCCCAGGGTGCAGAAGAACTACAAGGGTGTCTTCTaGTCCAAGCCCCCAAAACAG +
Preference number: 4 (lower is better)
Translates to: PLTAGLPPSRPHPRVQKNYKGVF*SKPPKQ
Trigger: CTGTTTTGGGGGCTTGGAGCAGAAGACACCCTTGTA...GTTCTTCTGCACCCTGGGGTGAGGACGGCTTGGAGGGAGACCAGCAGTTAACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp GCTATTACTCTAAGCCCAGATCCGACCCAGTCGGCACCAAACCACAGGAAGGATTCCCCCGCTGTTCCCTaGTCTGAGAGCATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AITLSPDPTQSAPNHRKDSPAVP*SESMRR
Trigger: CCTCCTCATGCTCTCAGAGCAGGGAACAGCGGGGGA...ATCCTTCCTGTGGTTTGGTGCCGACTGGGTCGGATCTGGGCTTAGAGTAATAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTTGTGAACCATGCACGTaGTGGCACTGGCCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTCEPCT*WHWPQE
Trigger: CTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACA...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCACTCACCCAGGCCCGGAGGCCTaGCCCCAGGATGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: SVHDATKVESTEVEMLTHPGPEA*PQDAAA
Trigger: AGCGGCTGCATCCTGGGGCCAGGCCTCCGGGCCTGG...GTGAGTGAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CACAATGTCCTTTCACAGTCACTGAGATTAGGTAGCAGAGAAACACAGCAAAGCCCAGGCCCGGAGGCCTaGCCCCAGGATGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: HNVLSQSLRLGSRETQQSPGPEA*PQDAAA
Trigger: AGCGGCTGCATCCTGGGGCCAGGCCTCCGGGCCTGG...GCTTTGCTGTGTTTCTCTGCTACCTAATCTCAGTGACTGTGAAAGGACATTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CCGTTAACTGCTGGTCTCCCTCCAAGCCGTCCTCACCCCAGGGTGCAGAAGAACCAAAGGGCCACAGGGTaGACACGAGAAAACAACACT +
Preference number: 4 (lower is better)
Translates to: PLTAGLPPSRPHPRVQKNQRATG*TRENNT
Trigger: AGTGTTGTTTTCTCGTGTCCACCCTGTGGCCCTTTG...GTTCTTCTGCACCCTGGGGTGAGGACGGCTTGGAGGGAGACCAGCAGTTAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CCATTGCAAAGGGCCACAGGGTGGACACGAGAAAACAACACTACACACACAGAGTTCAAGGGGAGTACCTaGGCAGCTCCCAGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: PLQRATGWTRENNTTHTEFKGST*AAPRGP
Trigger: TGGGCCCCTGGGAGCTGCCCAGGTACTCCCCTTGAA...CTCTGTGTGTGTAGTGTTGTTTTCTCGTGTCCACCCTGTGGCCCTTTGCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCCCTAGCACCAAACCCCAGCTaGAGCCAGTGGCCATGGCAA +
Preference number: 4 (lower is better)
Translates to: SSPSMRGRGKVLQPALALAPNPS*SQWPWQ
Trigger: TTGCCATGGCCACTGGCTCCAGCTGGGGTTTGGTGC...TAGGGCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTACTCCCTTGGGCCCATaGGAGGCCCAACTTCACATC +
Preference number: 4 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTTPLGP*EAQLHI
Trigger: GATGTGAAGTTGGGCCTCCCATGGGCCCAAGGGAGT...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp AAGAAAAACACAGCAGAGGAAGGGACTGACCCTCTGAGCACACAGTGGTTGACCACAGCGAGCAGCTGTTaGTACCCACCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: KKNTAEEGTDPLSTQWLTTASSC*YPPRAQ
Trigger: CTGGGCCCTGGGTGGGTACCAACAGCTGCTCGCTGT...GGTCAACCACTGTGTGCTCAGAGGGTCAGTCCCTTCCTCTGCTGTGTTTTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp GCTATTACTCTAAGCCCAGATCCGACCCAGTCGGCACCAAACCACAGGAAGGATAGGGGTCATCGTGACTaGGGCAGGGGAAGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: AITLSPDPTQSAPNHRKDRGHRD*GRGSEC
Trigger: GCACTCACTTCCCCTGCCCCAGTCACGATGACCCCT...ATCCTTCCTGTGGTTTGGTGCCGACTGGGTCGGATCTGGGCTTAGAGTAATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTGAGGAAGATCCTGGGTaGGATTCTCCCTTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTEEDPG*DSPFKG
Trigger: CCCCTTGAAGGGAGAATCTCACCCAGGATCTTCCTC...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACAGAGGGTGGAGGGAAGTaGGTATTTCCTGGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: PRILFCEPCTCWHWPQETEGGGK*VFPGLV
Trigger: AACAAGGCCAGGAAATACTCACTTCCCTCCACCCTC...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp TTAGGAGCAGGCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCAGAGGGTGACTGGGGCTaGACTGGGGGCCTGATATCT +
Preference number: 4 (lower is better)
Translates to: LGAGGSRDSEPRILFCEPEGDWG*TGGLIS
Trigger: AGATATCAGGCCCCCAGTTCAGCCCCAGTCACCCTC...TGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGCCTGCTCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp TCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCCCTAGGTCTAGGATGGACGTaGCCAGGATCAGCACCACCT +
Preference number: 4 (lower is better)
Translates to: SSPSMRGRGKVLQPALALGLGWT*PGSAPP
Trigger: AGGTGGTGCTGATCCTGGGCACGTCCATCCTAGACC...TAGGGCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp CACAATGTCCTTTCACAGTCACTGAGATTAGGTAGCAGAGAAACACAGCAAAGCCCAGGATGCAGCCGCTaGGGCCGCGGCGTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: HNVLSQSLRLGSRETQQSPGCSR*GRGVEL
Trigger: GAGCTCAACGCCGCGGCCGCAGCGGCTGCATCCTGG...GCTTTGCTGTGTTTCTCTGCTACCTAATCTCAGTGACTGTGAAAGGACATTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACAGGAATGTTCTGCAAGTaGAGCCTGGCTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PRILFCEPCTCWHWPQETGMFCK*SLAGFS
Trigger: AGAGAAGCCAGCCAGGCTGCACTTGCAGAACATTCC...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCCAGGAGACAGTGCCCTaGCTTGGCTGTCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSQETVP*LGCQVH
Trigger: GTGGACCTGACAGCCAAGGCAGGGCACTGTCTCCTG...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCACTCACTCCTCCGAGGGGCTCTaGGGCCGCCCAGCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: SVHDATKVESTEVEMLTHSSEGL*GRPAVP
Trigger: GGGAACAGCTGGGCGGCCCCAGAGCCCCTCGGAGGA...GTGAGTGAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS-3UTR CCA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCCCACCACCAGGTCAGTaGCGATCCAGGAGCACCAGT +
Preference number: 4 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSPPPGQ*RSRSTS
Trigger: ACTGGTGCTCCTGGATCGCCACTGACCTGGTGGTGG...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS-3UTR CCA 90 bp TCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCCCTACTCACCGTTAACTGCTaGTCTCCCTCCAAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: SSPSMRGRGKVLQPALALLTVNC*SPSKPS
Trigger: GGACGGCTTGGAGGGAGACCAGCAGTTAACGGTGAG...TAGGGCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp GCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGAGAGGCCAAGCCAATaGCTGATACTCCGCAGACCC +
Preference number: 4 (lower is better)
Translates to: AVLEILSPGSFSVNHARAERPSQ*LILRRP
Trigger: GGGTCTGCGGAGTATCAGCCATTGGCTTGGCCTCTC...AGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCCCTAGAGAGGCCAAGCCAATaGCTGATACTCCGCAGACCC +
Preference number: 4 (lower is better)
Translates to: SSPSMRGRGKVLQPALALERPSQ*LILRRP
Trigger: GGGTCTGCGGAGTATCAGCCATTGGCTTGGCCTCTC...TAGGGCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCCCTAAGGACAGGTGGGGAATaGGGCTTCCTACTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SSPSMRGRGKVLQPALALRTGGE*GFLLPW
Trigger: CCAAGGGAGTAGGAAGCCCCATTCCCCACCTGTCCT...TAGGGCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTGGCTCAAGAGAACTCTaGTCAAGCCTTCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTGSREL*SSLLPL
Trigger: GAGGGGCAGAAGGCTTGACCAGAGTTCTCTTGAGCC...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CCATTGCAAAGGGCCACAGGGTGGACACGAGAAAACAACACTACACACACAGAGAGGGGTCATCGTGACTaGGGCAGGGGAAGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: PLQRATGWTRENNTTHTERGHRD*GRGSEC
Trigger: GCACTCACTTCCCCTGCCCCAGTCACGATGACCCCT...CTCTGTGTGTGTAGTGTTGTTTTCTCGTGTCCACCCTGTGGCCCTTTGCAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TTAGGAGCAGGCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCAGACAGTGCCCTGCCTTaGCTGTCAGGTCCACGGAGA +
Preference number: 4 (lower is better)
Translates to: LGAGGSRDSEPRILFCEPDSALP*LSGPRR
Trigger: TCTCCGTGGACCTGACAGCCAAGGCAGGGCACTGTC...TGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGCCTGCTCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACAAGAGAGGAGCAGTATTaGGGAAGATCCTGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: PRILFCEPCTCWHWPQETREEQY*GRSWVR
Trigger: TCTCACCCAGGATCTTCCTCAATACTGCTCCTCTCT...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CCATTGCAAAGGGCCACAGGGTGGACACGAGAAAACAACACTACACACACAGAGCCCACCACATCCTGTTaGGGGTGGAGGGAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: PLQRATGWTRENNTTHTEPTTSC*GWREVS
Trigger: ACTCACTTCCCTCCACCCTCAACAGGATGTGGTGGG...CTCTGTGTGTGTAGTGTTGTTTTCTCGTGTCCACCCTGTGGCCCTTTGCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp AAGAAAAACACAGCAGAGGAAGGGACTGACCCTCTGAGCACACAGTGGTTGACCGTGACTTGGCACTTCTaGCCCTCCCTGTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: KKNTAEEGTDPLSTQWLTVTWHF*PSLCTL
Trigger: CAGAGTGCACAGGGAGGGTCAGAAGTGCCAAGTCAC...GGTCAACCACTGTGTGCTCAGAGGGTCAGTCCCTTCCTCTGCTGTGTTTTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp TCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCCCTAAAGCCCCTGACTTGCTaGATTGTTAGGAGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: SSPSMRGRGKVLQPALALKPLTC*IVRSRR
Trigger: CCGCCTGCTCCTAACAATTCAGCAAGTCAGGGGCTT...TAGGGCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACACAGAGAGGAAGCCCCTaGCTTGCTGAATTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: PRILFCEPCTCWHWPQETQRGSP*LAELLG
Trigger: TCCTAACAATTCAGCAAGTCAGGGGCTTCCTCTCTG...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp TCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCACTCACCTCCCCCGCGGCTGGTaGTGGTGCTGGTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SVHDATKVESTEVEMLTHLPRGW*WCWCCC
Trigger: ACAGCAGCACCAGCACCAGCACCAGCCGCGGGGGAG...GTGAGTGAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS-3UTR CCA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCACTCCCTTGGGCCCATaGGAGGCCCAACTTCACATC +
Preference number: 4 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSTPLGP*EAQLHI
Trigger: GATGTGAAGTTGGGCCTCCCATGGGCCCAAGGGAGT...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TTAGGAGCAGGCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCAAGGACAGGTGGGGAATaGGGCTTCCTACTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LGAGGSRDSEPRILFCEPRTGGE*GFLLPW
Trigger: CCAAGGGAGTAGGAAGCCCCATTCCCCACCTGTCCT...TGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGCCTGCTCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCGAACCATGCACGTGCTaGCACTGGCCTCAGGAGACA +
Preference number: 4 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSEPCTC*HWPQET
Trigger: TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTC...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CCGTTAACTGCTGGTCTCCCTCCAAGCCGTCCTCACCCCAGGGTGCAGAAGAACCTTCCAAATAGACCCTaGTCAAATCTAGGTGACAGA +
Preference number: 4 (lower is better)
Translates to: PLTAGLPPSRPHPRVQKNLPNRP*SNLGDR
Trigger: TCTGTCACCTAGATTTGATCAGGGTCTATTTGGAAG...GTTCTTCTGCACCCTGGGGTGAGGACGGCTTGGAGGGAGACCAGCAGTTAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp GCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGAGGGTGGAGGGAAGTaGGTATTTCCTGGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: AVLEILSPGSFSVNHARAEGGGK*VFPGLV
Trigger: AACAAGGCCAGGAAATACTCACTTCCCTCCACCCTC...AGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CCATTGCAAAGGGCCACAGGGTGGACACGAGAAAACAACACTACACACACAGAGCCTGCTCTGAGAGCATaGGGAGGCTCAAGAGAACTC +
Preference number: 4 (lower is better)
Translates to: PLQRATGWTRENNTTHTEPALRA*GGSREL
Trigger: GAGTTCTCTTGAGCCTCCTCATGCTCTCAGAGCAGG...CTCTGTGTGTGTAGTGTTGTTTTCTCGTGTCCACCCTGTGGCCCTTTGCAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp TTAGGAGCAGGCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCAATGTGTAAAAGAGGGTaGCTGGGGCTGAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: LGAGGSRDSEPRILFCEPMCKRG*LGLNWG
Trigger: CCCCCAGTTCAGCCCCAGTCACCCTCTTTTACACAT...TGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGCCTGCTCCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp GCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTGCTCGGTTCTCGAGATTCTaGGCCCAGGATCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: AVLEILSPGSFSVNHARARFSRF*AQDPFL
Trigger: CAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCG...AGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp CACAATGTCCTTTCACAGTCACTGAGATTAGGTAGCAGAGAAACACAGCAAAGCAGTCCGCGGCTGTCATaGTGCAGGAGGAGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: HNVLSQSLRLGSRETQQSSPRLS*CRRRWA
Trigger: CGCCCACCTCCTCCTGCAGCATGACAGCCGCGGACT...GCTTTGCTGTGTTTCTCTGCTACCTAATCTCAGTGACTGTGAAAGGACATTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS-3UTR GCA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCAGAGGAGAGGGTAAGTaGACCTACCTCCCTCACCGT +
Preference number: 4 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSRGEGK*TYLPHR
Trigger: ACGGTGAGGGAGGTAGGTGCACTTACCCTCTCCTCT...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp GCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGAAAGTTCTGCAGCCTaGCTTGGCCCTAGTGAGACT +
Preference number: 4 (lower is better)
Translates to: AVLEILSPGSFSVNHARAESSAA*LGPSET
Trigger: AGTCTCACTAGGGCCAAGGCAGGCTGCAGAACTTTC...AGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp GCTATTACTCTAAGCCCAGATCCGACCCAGTCGGCACCAAACCACAGGAAGGATGAAAGTTCTGCAGCCTaGCTTGGCCCTAGTGAGACT +
Preference number: 4 (lower is better)
Translates to: AITLSPDPTQSAPNHRKDESSAA*LGPSET
Trigger: AGTCTCACTAGGGCCAAGGCAGGCTGCAGAACTTTC...ATCCTTCCTGTGGTTTGGTGCCGACTGGGTCGGATCTGGGCTTAGAGTAATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp GCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCCCCTCCGGCCTTCTCTaGTGGGGCTTCACACACCCA +
Preference number: 4 (lower is better)
Translates to: AASVHDATKVESTEVEMLPSGLL*WGFTHP
Trigger: TGGGTGTGTGAAGCCCCAGCAGAGAAGGCCGGAGGG...GAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp GCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTGCTTGGGGGCCTGATATCTaGCAGAATTGGCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: AVLEILSPGSFSVNHARAWGPDI*QNWPSC
Trigger: GCAACTTGGCCAATTCTGGCAGATATCAGGCCCCCA...AGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp CATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGGAACTTATCACAGGGCCTCAGGAGACAGTaGCCTGCCTTGGCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: HQLLDISREVAAHWNLSQGLRRQ*PALAVR
Trigger: CCTGACAGCCAAGGCAGGGCACTGTCTCCTGAGGCC...CTGTGATAAGTTCCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp GCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCGGCCCCGGCTGTTCTTaGCGAAGAAGATGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: AASVHDATKVESTEVEMLGPGCS*RRRWPS
Trigger: GCTGGGCCATCTTCTTCGCCAAGAACAGCCGGGGCC...GAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS-3UTR CCA 90 bp CATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGGAACTTATCACAGTTCTCCGAGATGCAGTaGCCCAGCTGGGAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: HQLLDISREVAAHWNLSQFSEMQ*PSWEPP
Trigger: GGGAGGCTCCCAGCTGGGCCACTGCATCTCGGAGAA...CTGTGATAAGTTCCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CTTGTCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCTGCAGAAGAACACCCTaGCCCTTAGCCCTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: LVITLNERKRESSAACLGCRRTP*PLALKR
Trigger: CCTTTTCAGGGCTAAGGGCCAGGGTGTTCTTCTGCA...GCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTCAAAGGGCCACAGGGTaGACACGAGAAAACAACACT +
Preference number: 4 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTQRATG*TRENNT
Trigger: AGTGTTGTTTTCTCGTGTCCACCCTGTGGCCCTTTG...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CCGTTAACTGCTGGTCTCCCTCCAAGCCGTCCTCACCCCAGGGTGCAGAAGAACAGCACAGATTGTGCATaGAGTGTAAACATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: PLTAGLPPSRPHPRVQKNSTDCA*SVNIFP
Trigger: GGGGAAAATGTTTACACTCCATGCACAATCTGTGCT...GTTCTTCTGCACCCTGGGGTGAGGACGGCTTGGAGGGAGACCAGCAGTTAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGGAACTTATCACAGTGCACGTGCTGGCACTaGCCTCAGGAGACAGTGCCC +
Preference number: 4 (lower is better)
Translates to: HQLLDISREVAAHWNLSQCTCWH*PQETVP
Trigger: GGGCACTGTCTCCTGAGGCCAGTGCCAGCACGTGCA...CTGTGATAAGTTCCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CACAATGTCCTTTCACAGTCACTGAGATTAGGTAGCAGAGAAACACAGCAAAGCGCGCGCGTAGCTCGATaGGGTCTAGGATGGACGTGC +
Preference number: 4 (lower is better)
Translates to: HNVLSQSLRLGSRETQQSARVAR*GLGWTC
Trigger: GCACGTCCATCCTAGACCTCATCGAGCTACGCGCGC...GCTTTGCTGTGTTTCTCTGCTACCTAATCTCAGTGACTGTGAAAGGACATTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp GCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCTCAGCTCCACCAGCGTaGAGCTGTCGAGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: AASVHDATKVESTEVEMLSAPPA*SCRAGP
Trigger: TGGACCTGCTCGACAGCTTCACGCTGGTGGAGCTGA...GAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp GCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCCCACAGCCAGGGTGTTaGCATAGCCATGAGCACCCC +
Preference number: 4 (lower is better)
Translates to: AASVHDATKVESTEVEMLPQPGC*HSHEHP
Trigger: GGGGTGCTCATGGCTATGTCAACACCCTGGCTGTGG...GAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTCACCACCTCACTTTCTaGTCTACACTTCCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTHHLTF*STLPRG
Trigger: TCCTCTAGGAAGTGTAGATCAGAAAGTGAGGTGGTG...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTCAAAGACTGCAAGAGTaGCATTCCACACCGACTGTA +
Preference number: 4 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTQRLQE*HSTPTV
Trigger: TACAGTCGGTGTGGAATGTCACTCTTGCAGTCTTTG...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTAAAAACAAGGACCCGTaGCCTTCACCCTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTKNKDP*PSPSIL
Trigger: CAGAATTGAGGGTGAAGGGCACGGGTCCTTGTTTTT...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACATCACCCAAGAAAGGGTaGAGTTTGGTCCTTAGAGAA +
Preference number: 4 (lower is better)
Translates to: PRILFCEPCTCWHWPQETSPKKG*SLVLRE
Trigger: TTCTCTAAGGACCAAACTGCACCCTTTCTTGGGTGA...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp CATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGGAACTTATCACAGTCCCCCGCTGTTCCCTaGTCTGAGAGCATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: HQLLDISREVAAHWNLSQSPAVP*SESMRR
Trigger: CCTCCTCATGCTCTCAGAGCAGGGAACAGCGGGGGA...CTGTGATAAGTTCCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TTAGGAGCAGGCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCAGAAGAACACCCTaGCCCTTAGCCCTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: LGAGGSRDSEPRILFCEPCRRTP*PLALKR
Trigger: CCTTTTCAGGGCTAAGGGCCAGGGTGTTCTTCTGCA...TGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGCCTGCTCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CTTGTCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCCTTGGAGGTCAGGATTaGGGTAGGATAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LVITLNERKRESSAACLGLGGQD*GRIGEE
Trigger: CTCTTCTCCTATCCTACCCCAATCCTGACCTCCAAG...GCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTCAAGAGACACATCAGTaGAAAGTGGGTTCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTQETHQ*KVGSGS
Trigger: TGACCCAGAACCCACTTTCCACTGATGTGTCTCTTG...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCCCTATGGAGCCAGTGGCCATaGCAAATGCAACTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: SSPSMRGRGKVLQPALALWSQWP*QMQLLS
Trigger: ACTCAGAAGTTGCATTTGCCATGGCCACTGGCTCCA...TAGGGCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGGAACTTATCACAGTCTGCAAGTGCAGCCTaGCTGGCTTCTCTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: HQLLDISREVAAHWNLSQSASAA*LASLPA
Trigger: GGCTGGGAGAGAAGCCAGCCAGGCTGCACTTGCAGA...CTGTGATAAGTTCCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CTTGTCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCCATAGGGTGAGGGACTaGAAGCACAGATTGTGCATG +
Preference number: 4 (lower is better)
Translates to: LVITLNERKRESSAACLGHRVRD*KHRLCM
Trigger: CATGCACAATCTGTGCTTCCAGTCCCTCACCCTATG...GCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp GCTATTACTCTAAGCCCAGATCCGACCCAGTCGGCACCAAACCACAGGAAGGATGAAGTGGCAGCTCATTaGAACTTATCACAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: AITLSPDPTQSAPNHRKDEVAAH*NLSQPP
Trigger: GGGAGGCTGTGATAAGTTCCAATGAGCTGCCACTTC...ATCCTTCCTGTGGTTTGGTGCCGACTGGGTCGGATCTGGGCTTAGAGTAATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp TCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCCCTACACCACCTCACTTTCTaGTCTACACTTCCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: SSPSMRGRGKVLQPALALHHLTF*STLPRG
Trigger: TCCTCTAGGAAGTGTAGATCAGAAAGTGAGGTGGTG...TAGGGCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp GCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCCCCACCACATCCTGTTaGGGGTGGAGGGAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: AASVHDATKVESTEVEMLPTTSC*GWREVS
Trigger: ACTCACTTCCCTCCACCCTCAACAGGATGTGGTGGG...GAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp TTGCAAGCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAGAGGGTGACTGGGGCTaGACTGGGGGCCTGATATCT +
Preference number: 4 (lower is better)
Translates to: LQAASVHDATKVESTEVEEGDWG*TGGLIS
Trigger: AGATATCAGGCCCCCAGTTCAGCCCCAGTCACCCTC...TTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGCTTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CCATTGCAAAGGGCCACAGGGTGGACACGAGAAAACAACACTACACACACAGAGCAGAGAGGAAGCCCCTaGCTTGCTGAATTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: PLQRATGWTRENNTTHTEQRGSP*LAELLG
Trigger: TCCTAACAATTCAGCAAGTCAGGGGCTTCCTCTCTG...CTCTGTGTGTGTAGTGTTGTTTTCTCGTGTCCACCCTGTGGCCCTTTGCAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp GCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTGCTAAAAACAAGGACCCGTaGCCTTCACCCTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: AVLEILSPGSFSVNHARAKNKDP*PSPSIL
Trigger: CAGAATTGAGGGTGAAGGGCACGGGTCCTTGTTTTT...AGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp CATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGGAACTTATCACAGTCCCTCACCGTTAACTaGTGGTCTCCCTCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: HQLLDISREVAAHWNLSQSLTVN*WSPSKP
Trigger: CGGCTTGGAGGGAGACCAGCAGTTAACGGTGAGGGA...CTGTGATAAGTTCCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCGAGAAATCTCAGGTTTaGCCCTTCACTAGGGATGCC +
Preference number: 4 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSEKSQV*PFTRDA
Trigger: GGCATCCCTAGTGAAGGGGCAAACCTGAGATTTCTC...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp TTGCAAGCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAACAGGAGACAGTGCCCTaGCTTGGCTGTCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LQAASVHDATKVESTEVEQETVP*LGCQVH
Trigger: GTGGACCTGACAGCCAAGGCAGGGCACTGTCTCCTG...TTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGCTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CTTGTCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCGGATGGGAATTAGAGTaGAGGTGGGCAAAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: LVITLNERKRESSAACLGGWELE*RWAKQE
Trigger: TTCTTGCTTTGCCCACCTCCACTCTAATTCCCATCC...GCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCTGGAGCCAGTGGCCATaGCAAATGCAACTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSWSQWP*QMQLLS
Trigger: ACTCAGAAGTTGCATTTGCCATGGCCACTGGCTCCA...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCACTCACGCACCAAACCCCAGCTaGAGCCAGTGGCCATGGCAA +
Preference number: 4 (lower is better)
Translates to: SVHDATKVESTEVEMLTHAPNPS*SQWPWQ
Trigger: TTGCCATGGCCACTGGCTCCAGCTGGGGTTTGGTGC...GTGAGTGAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TTGCAAGCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAACAAGTGCAGCCTGGCTaGCTTCTCTCCCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: LQAASVHDATKVESTEVEQVQPG*LLSQPP
Trigger: AGGTGGCTGGGAGAGAAGCCAGCCAGGCTGCACTTG...TTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGCTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TTGCAAGCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAATCTGCAAGTGCAGCCTaGCTGGCTTCTCTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LQAASVHDATKVESTEVESASAA*LASLPA
Trigger: GGCTGGGAGAGAAGCCAGCCAGGCTGCACTTGCAGA...TTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGCTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGGAACTTATCACAGTCCGGCCTTCTCTGCTaGGGCTTCACACACCCAGTA +
Preference number: 4 (lower is better)
Translates to: HQLLDISREVAAHWNLSQSGLLC*GFTHPV
Trigger: TACTGGGTGTGTGAAGCCCCAGCAGAGAAGGCCGGA...CTGTGATAAGTTCCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CCATTGCAAAGGGCCACAGGGTGGACACGAGAAAACAACACTACACACACAGAGCATAGGGTGAGGGACTaGAAGCACAGATTGTGCATG +
Preference number: 4 (lower is better)
Translates to: PLQRATGWTRENNTTHTEHRVRD*KHRLCM
Trigger: CATGCACAATCTGTGCTTCCAGTCCCTCACCCTATG...CTCTGTGTGTGTAGTGTTGTTTTCTCGTGTCCACCCTGTGGCCCTTTGCAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TTGCAAGCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAGACAGTGCCCTGCCTTaGCTGTCAGGTCCACGGAGA +
Preference number: 4 (lower is better)
Translates to: LQAASVHDATKVESTEVEDSALP*LSGPRR
Trigger: TCTCCGTGGACCTGACAGCCAAGGCAGGGCACTGTC...TTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGCTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGGAACTTATCACAGGAACCATGCACGTGCTaGCACTGGCCTCAGGAGACA +
Preference number: 4 (lower is better)
Translates to: HQLLDISREVAAHWNLSQEPCTC*HWPQET
Trigger: TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTC...CTGTGATAAGTTCCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp GCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCGAGGAAGATCCTGGGTaGGATTCTCCCTTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: AASVHDATKVESTEVEMLEEDPG*DSPFKG
Trigger: CCCCTTGAAGGGAGAATCTCACCCAGGATCTTCCTC...GAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp TCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCACTCACGGCCAAGCCAATGGCTaGTACTCCGCAGACCCTGTA +
Preference number: 4 (lower is better)
Translates to: SVHDATKVESTEVEMLTHGQANG*YSADPV
Trigger: TACAGGGTCTGCGGAGTATCAGCCATTGGCTTGGCC...GTGAGTGAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CACAATGTCCTTTCACAGTCACTGAGATTAGGTAGCAGAGAAACACAGCAAAGCGGCCAAGCCAATGGCTaGTACTCCGCAGACCCTGTA +
Preference number: 4 (lower is better)
Translates to: HNVLSQSLRLGSRETQQSGQANG*YSADPV
Trigger: TACAGGGTCTGCGGAGTATCAGCCATTGGCTTGGCC...GCTTTGCTGTGTTTCTCTGCTACCTAATCTCAGTGACTGTGAAAGGACATTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCCAAAGACTGCAAGAGTaGCATTCCACACCGACTGTA +
Preference number: 4 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSQRLQE*HSTPTV
Trigger: TACAGTCGGTGTGGAATGTCACTCTTGCAGTCTTTG...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CACAATGTCCTTTCACAGTCACTGAGATTAGGTAGCAGAGAAACACAGCAAAGCGTGACTTGGCACTTCTaGCCCTCCCTGTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: HNVLSQSLRLGSRETQQSVTWHF*PSLCTL
Trigger: CAGAGTGCACAGGGAGGGTCAGAAGTGCCAAGTCAC...GCTTTGCTGTGTTTCTCTGCTACCTAATCTCAGTGACTGTGAAAGGACATTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp TCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCACTCACAGCAGAGGAAGGGACTaGCCCTCTGAGCACACAGTG +
Preference number: 4 (lower is better)
Translates to: SVHDATKVESTEVEMLTHSRGRD*PSEHTV
Trigger: CACTGTGTGCTCAGAGGGTCAGTCCCTTCCTCTGCT...GTGAGTGAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CACAATGTCCTTTCACAGTCACTGAGATTAGGTAGCAGAGAAACACAGCAAAGCAGCAGAGGAAGGGACTaGCCCTCTGAGCACACAGTG +
Preference number: 4 (lower is better)
Translates to: HNVLSQSLRLGSRETQQSSRGRD*PSEHTV
Trigger: CACTGTGTGCTCAGAGGGTCAGTCCCTTCCTCTGCT...GCTTTGCTGTGTTTCTCTGCTACCTAATCTCAGTGACTGTGAAAGGACATTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp GCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCCACACCGACTGTAAGTaGACAGTCCCCGGATGTCTC +
Preference number: 4 (lower is better)
Translates to: AASVHDATKVESTEVEMLHTDCK*TVPGCL
Trigger: GAGACATCCGGGGACTGTGCACTTACAGTCGGTGTG...GAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp CACAATGTCCTTTCACAGTCACTGAGATTAGGTAGCAGAGAAACACAGCAAAGCTGTGAACCATGCACGTaGTGGCACTGGCCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: HNVLSQSLRLGSRETQQSCEPCT*WHWPQE
Trigger: CTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACA...GCTTTGCTGTGTTTCTCTGCTACCTAATCTCAGTGACTGTGAAAGGACATTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CACAATGTCCTTTCACAGTCACTGAGATTAGGTAGCAGAGAAACACAGCAAAGCCTCACCGTTAACTGCTaGTCTCCCTCCAAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: HNVLSQSLRLGSRETQQSLTVNC*SPSKPS
Trigger: GGACGGCTTGGAGGGAGACCAGCAGTTAACGGTGAG...GCTTTGCTGTGTTTCTCTGCTACCTAATCTCAGTGACTGTGAAAGGACATTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp AAGAAAAACACAGCAGAGGAAGGGACTGACCCTCTGAGCACACAGTGGTTGACCTCTCCTCCTAATGGATaGGAATTAGAGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: KKNTAEEGTDPLSTQWLTSPPNG*ELEWRW
Trigger: CCACCTCCACTCTAATTCCCATCCATTAGGAGGAGA...GGTCAACCACTGTGTGCTCAGAGGGTCAGTCCCTTCCTCTGCTGTGTTTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp GCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCGCTGGAGAGAGGACATaGGAACAGCGAGCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: AASVHDATKVESTEVEMLAGERT*EQRAAV
Trigger: AACAGCTGCTCGCTGTTCCCATGTCCTCTCTCCAGC...GAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCCCTCTGAGCACACAGTaGTTGACCCACATGTGTAAA +
Preference number: 4 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSPLSTQ*LTHMCK
Trigger: TTTACACATGTGGGTCAACCACTGTGTGCTCAGAGG...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp TCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCACTCACTTGGGCCACATAGGGTaGGGGACTGGAAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: SVHDATKVESTEVEMLTHLGHIG*GTGSTD
Trigger: ATCTGTGCTTCCAGTCCCTCACCCTATGTGGCCCAA...GTGAGTGAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CACAATGTCCTTTCACAGTCACTGAGATTAGGTAGCAGAGAAACACAGCAAAGCATGTGTAAAAGAGGGTaGCTGGGGCTGAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: HNVLSQSLRLGSRETQQSMCKRG*LGLNWG
Trigger: CCCCCAGTTCAGCCCCAGTCACCCTCTTTTACACAT...GCTTTGCTGTGTTTCTCTGCTACCTAATCTCAGTGACTGTGAAAGGACATTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGGAACTTATCACAGCAGGATCCTTTTCTGTaGACCATGCACGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: HQLLDISREVAAHWNLSQQDPFL*TMHVLA
Trigger: TGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTG...CTGTGATAAGTTCCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CACAATGTCCTTTCACAGTCACTGAGATTAGGTAGCAGAGAAACACAGCAAAGCAAGCCCCTGACTTGCTaGATTGTTAGGAGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: HNVLSQSLRLGSRETQQSKPLTC*IVRSRR
Trigger: CCGCCTGCTCCTAACAATTCAGCAAGTCAGGGGCTT...GCTTTGCTGTGTTTCTCTGCTACCTAATCTCAGTGACTGTGAAAGGACATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp TTGCAAGCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAAGAGGAGAGGGTAAGTaGACCTACCTCCCTCACCGT +
Preference number: 4 (lower is better)
Translates to: LQAASVHDATKVESTEVERGEGK*TYLPHR
Trigger: ACGGTGAGGGAGGTAGGTGCACTTACCCTCTCCTCT...TTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGCTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp TTAGGAGCAGGCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATCACCCAAGAAAGGGTaGAGTTTGGTCCTTAGAGAA +
Preference number: 4 (lower is better)
Translates to: LGAGGSRDSEPRILFCEPSPKKG*SLVLRE
Trigger: TTCTCTAAGGACCAAACTGCACCCTTTCTTGGGTGA...TGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGCCTGCTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp TCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCACTCACCCTGGCCTTGTTAGCTaGTGTCCTCCTGCACCCTTA +
Preference number: 4 (lower is better)
Translates to: SVHDATKVESTEVEMLTHPGLVS*CPPAPL
Trigger: TAAGGGTGCAGGAGGACAGCAGCTAACAAGGCCAGG...GTGAGTGAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp GCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTGCTCAGAATTGGCCAAGTTaGCATCAGCTTCTTGACATA +
Preference number: 4 (lower is better)
Translates to: AVLEILSPGSFSVNHARAQNWPS*HQLLDI
Trigger: TATGTCAAGAAGCTGATGGCAACTTGGCCAATTCTG...AGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCCCTACACATCAGTGGAAAGTaGGTTCTGGGTCAATTTCAA +
Preference number: 4 (lower is better)
Translates to: SSPSMRGRGKVLQPALALHISGK*VLGQFQ
Trigger: TTGAAATTGACCCAGAACCCACTTTCCACTGATGTG...TAGGGCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TTAGGAGCAGGCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCACTTCCTGGGAATTCATaGTCACAAATCCAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LGAGGSRDSEPRILFCEPLPGNS*SQIQAE
Trigger: TTCTGCCTGGATTTGTGACCATGAATTCCCAGGAAG...TGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGCCTGCTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp AAGAAAAACACAGCAGAGGAAGGGACTGACCCTCTGAGCACACAGTGGTTGACCAGAAAGGGTGCAGTTTaGTCCTTAGAGAATGGATCC +
Preference number: 4 (lower is better)
Translates to: KKNTAEEGTDPLSTQWLTRKGAV*SLENGS
Trigger: GGATCCATTCTCTAAGGACCAAACTGCACCCTTTCT...GGTCAACCACTGTGTGCTCAGAGGGTCAGTCCCTTCCTCTGCTGTGTTTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCACTCACGGCTCAAGAGAACTCTaGTCAAGCCTTCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SVHDATKVESTEVEMLTHGSREL*SSLLPL
Trigger: GAGGGGCAGAAGGCTTGACCAGAGTTCTCTTGAGCC...GTGAGTGAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp GCTATTACTCTAAGCCCAGATCCGACCCAGTCGGCACCAAACCACAGGAAGGATAGCACAGATTGTGCATaGAGTGTAAACATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: AITLSPDPTQSAPNHRKDSTDCA*SVNIFP
Trigger: GGGGAAAATGTTTACACTCCATGCACAATCTGTGCT...ATCCTTCCTGTGGTTTGGTGCCGACTGGGTCGGATCTGGGCTTAGAGTAATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TTGCAAGCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAGCTGGAGAGAGGACATaGGAACAGCGAGCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: LQAASVHDATKVESTEVEAGERT*EQRAAV
Trigger: AACAGCTGCTCGCTGTTCCCATGTCCTCTCTCCAGC...TTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGCTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp AAGAAAAACACAGCAGAGGAAGGGACTGACCCTCTGAGCACACAGTGGTTGACCGATATCTGCCAGAATTaGCCAAGTTGCCATCAGCTT +
Preference number: 4 (lower is better)
Translates to: KKNTAEEGTDPLSTQWLTDICQN*PSCHQL
Trigger: AAGCTGATGGCAACTTGGCCAATTCTGGCAGATATC...GGTCAACCACTGTGTGCTCAGAGGGTCAGTCCCTTCCTCTGCTGTGTTTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp CCATTGCAAAGGGCCACAGGGTGGACACGAGAAAACAACACTACACACACAGAGCTTCCAAATAGACCCTaGTCAAATCTAGGTGACAGA +
Preference number: 4 (lower is better)
Translates to: PLQRATGWTRENNTTHTELPNRP*SNLGDR
Trigger: TCTGTCACCTAGATTTGATCAGGGTCTATTTGGAAG...CTCTGTGTGTGTAGTGTTGTTTTCTCGTGTCCACCCTGTGGCCCTTTGCAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp TCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCACTCACGGAATGTTCTGCAAGTaGAGCCTGGCTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SVHDATKVESTEVEMLTHGMFCK*SLAGFS
Trigger: AGAGAAGCCAGCCAGGCTGCACTTGCAGAACATTCC...GTGAGTGAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp CACAATGTCCTTTCACAGTCACTGAGATTAGGTAGCAGAGAAACACAGCAAAGCTGGGGGCCTGATATCTaGCAGAATTGGCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: HNVLSQSLRLGSRETQQSWGPDI*QNWPSC
Trigger: GCAACTTGGCCAATTCTGGCAGATATCAGGCCCCCA...GCTTTGCTGTGTTTCTCTGCTACCTAATCTCAGTGACTGTGAAAGGACATTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp CATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGGAACTTATCACAGGAGAAATCTCAGGTTTaGCCCTTCACTAGGGATGCC +
Preference number: 4 (lower is better)
Translates to: HQLLDISREVAAHWNLSQEKSQV*PFTRDA
Trigger: GGCATCCCTAGTGAAGGGGCAAACCTGAGATTTCTC...CTGTGATAAGTTCCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp TCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCACTCACCTTTTCTGTGAACCATaGACGTGCTGGCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: SVHDATKVESTEVEMLTHLFCEP*TCWHWP
Trigger: AGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAG...GTGAGTGAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGGAACTTATCACAGCTTGGAGGTCAGGATTaGGGTAGGATAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: HQLLDISREVAAHWNLSQLGGQD*GRIGEE
Trigger: CTCTTCTCCTATCCTACCCCAATCCTGACCTCCAAG...CTGTGATAAGTTCCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGGAACTTATCACAGAGAAGACAAGGGGGTTaGGGACTCTCAACCCAAAAA +
Preference number: 4 (lower is better)
Translates to: HQLLDISREVAAHWNLSQRRQGG*GLSTQK
Trigger: TTTTTGGGTTGAGAGTCCCCAACCCCCTTGTCTTCT...CTGTGATAAGTTCCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGGAACTTATCACAGGGATGGGAATTAGAGTaGAGGTGGGCAAAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: HQLLDISREVAAHWNLSQGWELE*RWAKQE
Trigger: TTCTTGCTTTGCCCACCTCCACTCTAATTCCCATCC...CTGTGATAAGTTCCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TTGCAAGCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAGAAGTGGCAGCTCATTaGAACTTATCACAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LQAASVHDATKVESTEVEEVAAH*NLSQPP
Trigger: GGGAGGCTGTGATAAGTTCCAATGAGCTGCCACTTC...TTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGCTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGGAACTTATCACAGCCTCTGAGCACACAGTaGTTGACCCACATGTGTAAA +
Preference number: 4 (lower is better)
Translates to: HQLLDISREVAAHWNLSQPLSTQ*LTHMCK
Trigger: TTTACACATGTGGGTCAACCACTGTGTGCTCAGAGG...CTGTGATAAGTTCCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp TTGCAAGCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAATGTCATCACCCTCAATaGGAGGAAGAGGGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: LQAASVHDATKVESTEVECHHPQ*EEEGKF
Trigger: GAACTTTCCCTCTTCCTCTCATTGAGGGTGATGACA...TTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGCTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR TCA 90 bp TCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCACTCACTGTCATCACCCTCAATaGGAGGAAGAGGGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: SVHDATKVESTEVEMLTHCHHPQ*EEEGKF
Trigger: GAACTTTCCCTCTTCCTCTCATTGAGGGTGATGACA...GTGAGTGAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TTGCAAGCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAAGAAGACAAGGGGGTTaGGGACTCTCAACCCAAAAA +
Preference number: 4 (lower is better)
Translates to: LQAASVHDATKVESTEVERRQGG*GLSTQK
Trigger: TTTTTGGGTTGAGAGTCCCCAACCCCCTTGTCTTCT...TTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGCTTGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CACAATGTCCTTTCACAGTCACTGAGATTAGGTAGCAGAGAAACACAGCAAAGCTCTCCTCCTAATGGATaGGAATTAGAGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: HNVLSQSLRLGSRETQQSSPPNG*ELEWRW
Trigger: CCACCTCCACTCTAATTCCCATCCATTAGGAGGAGA...GCTTTGCTGTGTTTCTCTGCTACCTAATCTCAGTGACTGTGAAAGGACATTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp CACAATGTCCTTTCACAGTCACTGAGATTAGGTAGCAGAGAAACACAGCAAAGCGTGGAAAGTGGGTTCTaGGTCAATTTCAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: HNVLSQSLRLGSRETQQSVESGF*VNFKAW
Trigger: CCATGCCTTGAAATTGACCCAGAACCCACTTTCCAC...GCTTTGCTGTGTTTCTCTGCTACCTAATCTCAGTGACTGTGAAAGGACATTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp GCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCGATATCTGCCAGAATTaGCCAAGTTGCCATCAGCTT +
Preference number: 4 (lower is better)
Translates to: AASVHDATKVESTEVEMLDICQN*PSCHQL
Trigger: AAGCTGATGGCAACTTGGCCAATTCTGGCAGATATC...GAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp GCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCCACATCAGTGGAAAGTaGGTTCTGGGTCAATTTCAA +
Preference number: 4 (lower is better)
Translates to: AASVHDATKVESTEVEMLHISGK*VLGQFQ
Trigger: TTGAAATTGACCCAGAACCCACTTTCCACTGATGTG...GAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CCA 90 bp TCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCACTCACAGAAAGGGTGCAGTTTaGTCCTTAGAGAATGGATCC +
Preference number: 4 (lower is better)
Translates to: SVHDATKVESTEVEMLTHRKGAV*SLENGS
Trigger: GGATCCATTCTCTAAGGACCAAACTGCACCCTTTCT...GTGAGTGAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR GCA 90 bp CACAATGTCCTTTCACAGTCACTGAGATTAGGTAGCAGAGAAACACAGCAAAGCCAGAATTGGCCAAGTTaGCATCAGCTTCTTGACATA +
Preference number: 4 (lower is better)
Translates to: HNVLSQSLRLGSRETQQSQNWPS*HQLLDI
Trigger: TATGTCAAGAAGCTGATGGCAACTTGGCCAATTCTG...GCTTTGCTGTGTTTCTCTGCTACCTAATCTCAGTGACTGTGAAAGGACATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS GCA 90 bp CCCAGCGGCACCTGGGACTGGGGGCGCAGCCGCGGCGCCGACCTCTaGGGCCGGGGCGGTCTGGGCAGCCGCAGCAGCAGCAACACGGGC +
Preference number: 5 (lower is better)
Translates to: PSGTWDWGRSRGADL*GRGGLGSRSSSNTG
Trigger: GCCCGTGTTGCTGCTGCTGCGGCTGCCCAGACCGCCCCGGCCGCAGAGGTCGGCGCCGCGGCTGCGCCCCCAGTCCCAGGTGCCGCTGGG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS GCA 90 bp CGCGTCTGCCGCCGCCTCCCCCGCGGCTGGTGCTGGTGCTGGTGCTaGTGTCGCCGGAGCCTCTCCGGCCGCGGAAGGAGCCCCCGCGGA +
Preference number: 5 (lower is better)
Translates to: RVCRRLPRGWCWCWC*CRRSLSGRGRSPRG
Trigger: TCCGCGGGGGCTCCTTCCGCGGCCGGAGAGGCTCCGGCGACAGCAGCACCAGCACCAGCACCAGCCGCGGGGGAGGCGGCGGCAGACGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS GCA 90 bp CGGCCCCGGCCGCGGCGCCCCCGCCGAAGTCCGCGGCTGTCATGCTaGAGGAGGAGGTGGGCGTGGAGGTGGAGGAGGAGGTGGCCGCTG +
Preference number: 5 (lower is better)
Translates to: RPRPRRPRRSPRLSC*RRRWAWRWRRRWPL
Trigger: CAGCGGCCACCTCCTCCTCCACCTCCACGCCCACCTCCTCCTGCAGCATGACAGCCGCGGACTTCGGCGGGGGCGCCGCGGCCGGGGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS CCA 90 bp GCAGTGGGGACTCGCACCTGGGCCGGGCGGCGGCGAGATCCGGACTaGAGCCACTGGACTGGGCGAGCCGGGCCGGGCGGCAGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: AVGTRTWAGRRRDPD*SHWTGRAGPGGRER
Trigger: CCTCTCCCTGCCGCCCGGCCCGGCTCGCCCAGTCCAGTGGCTCCAGTCCGGATCTCGCCGCCGCCCGGCCCAGGTGCGAGTCCCCACTGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS CCA 90 bp AGGTCCAAGCACGTGCCCAGGAAGCATCCGGCCGCGCGGTGCCGCTaGGGCTGCAGCAGCAGGGGTCCTGCCGATCCCGGGGGCGCGCCC +
Preference number: 5 (lower is better)
Translates to: RSKHVPRKHPAARCR*GCSSRGPADPGGAP
Trigger: GGGCGCGCCCCCGGGATCGGCAGGACCCCTGCTGCTGCAGCCCCAGCGGCACCGCGCGGCCGGATGCTTCCTGGGCACGTGCTTGGACCT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS CCA 90 bp CCCAGGATCAGCACCACCTGGGCCGGGCGGCGGCGAGATCCGGACTaGAGCCACTGGACTGGGCGAGCCGGGCCGGGCGGCAGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: PRISTTWAGRRRDPD*SHWTGRAGPGGRER
Trigger: CCTCTCCCTGCCGCCCGGCCCGGCTCGCCCAGTCCAGTGGCTCCAGTCCGGATCTCGCCGCCGCCCGGCCCAGGTGGTGCTGATCCTGGG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399875.1
CDS CCA 90 bp CTGTCATGCTGCAGGAGGAGGTGGGCGTGGAGGTGGAGGAGGAGGTaGCCGCTGAGGAGGAGAAGGCGACAGGCGCGGGGCCGGCGGGGG +
Preference number: 5 (lower is better)
Translates to: LSCCRRRWAWRWRRR*PLRRRRRQARGRRG
Trigger: CCCCCGCCGGCCCCGCGCCTGTCGCCTTCTCCTCCTCAGCGGCCACCTCCTCCTCCACCTCCACGCCCACCTCCTCCTGCAGCATGACAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS CCA 90 bp CGGCGCCCCCGCCGAAGTCCGCGGCTGTCATGCTGCAGGAGGAGGTaGGCGTGGAGGTGGAGGAGGAGGTGGCCGCTGAGGAGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: RRPRRSPRLSCCRRR*AWRWRRRWPLRRRR
Trigger: CCTTCTCCTCCTCAGCGGCCACCTCCTCCTCCACCTCCACGCCCACCTCCTCCTGCAGCATGACAGCCGCGGACTTCGGCGGGGGCGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS CCA 90 bp TGTGCGCGCCGCTGGCTGCGCCGCCCCGACGGCCCCGGCTGTTCTTaGCGAAGAAGATGGCCCAGCCCACCACCACCACCAGGTCAGTGG +
Preference number: 5 (lower is better)
Translates to: CARRWLRRPDGPGCS*RRRWPSPPPPPGQW
Trigger: CCACTGACCTGGTGGTGGTGGTGGGCTGGGCCATCTTCTTCGCCAAGAACAGCCGGGGCCGTCGGGGCGGCGCAGCCAGCGGCGCGCACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS TCA 90 bp GCGCGGGCAGCGGCACGCGGCCCTCCAGCATCAGCTCCACCAGCGTaGAGCTGTCGAGCAGGTCCAAGCACGTGCCCAGGAAGCATCCGG +
Preference number: 5 (lower is better)
Translates to: ARAAARGPPASAPPA*SCRAGPSTCPGSIR
Trigger: CCGGATGCTTCCTGGGCACGTGCTTGGACCTGCTCGACAGCTTCACGCTGGTGGAGCTGATGCTGGAGGGCCGCGTGCCGCTGCCCGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS CCA 90 bp CGAAGTCCGCGGCTGTCATGCTGCAGGAGGAGGTGGGCGTGGAGGTaGAGGAGGAGGTGGCCGCTGAGGAGGAGAAGGCGACAGGCGCGG +
Preference number: 5 (lower is better)
Translates to: RSPRLSCCRRRWAWR*RRRWPLRRRRRQAR
Trigger: CCGCGCCTGTCGCCTTCTCCTCCTCAGCGGCCACCTCCTCCTCCACCTCCACGCCCACCTCCTCCTGCAGCATGACAGCCGCGGACTTCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS CCA 90 bp CCCCGCCGAAGTCCGCGGCTGTCATGCTGCAGGAGGAGGTGGGCGTaGAGGTGGAGGAGGAGGTGGCCGCTGAGGAGGAGAAGGCGACAG +
Preference number: 5 (lower is better)
Translates to: PRRSPRLSCCRRRWA*RWRRRWPLRRRRRQ
Trigger: CTGTCGCCTTCTCCTCCTCAGCGGCCACCTCCTCCTCCACCTCCACGCCCACCTCCTCCTGCAGCATGACAGCCGCGGACTTCGGCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS CCA 90 bp TGGCTGCGCCGCCCCGACGGCCCCGGCTGTTCTTGGCGAAGAAGATaGCCCAGCCCACCACCACCACCAGGTCAGTGGCGATCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: WLRRPDGPGCSWRRR*PSPPPPPGQWRSRS
Trigger: GCTCCTGGATCGCCACTGACCTGGTGGTGGTGGTGGGCTGGGCCATCTTCTTCGCCAAGAACAGCCGGGGCCGTCGGGGCGGCGCAGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS-3UTR CAA 90 bp CCGTTAACTGCTGGTCTCCCTCCAAGCCGTCCTCACCCCAGGGTGCAGAAGAACCTCGGGGAGGCCCGATaGCCCCGGTCCCAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: PLTAGLPPSRPHPRVQKNLGEAR*PRSQQP
Trigger: GGGCTGCTGGGACCGGGGCAATCGGGCCTCCCCGAG...GTTCTTCTGCACCCTGGGGTGAGGACGGCTTGGAGGGAGACCAGCAGTTAACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp CTTGTCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCCCCAGGAGCGCGGCGTaGGGCACCAGCGGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LVITLNERKRESSAACLGPRSAA*GTSGLL
Trigger: CAGCAAGCCGCTGGTGCCCAACGCCGCGCTCCTGGG...GCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS-3UTR CAA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTTTGGGCACCAGCGGCTaGCTGACGCTGAGGCTCTCG +
Preference number: 5 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTLGTSG*LTLRLS
Trigger: CGAGAGCCTCAGCGTCAGCAAGCCGCTGGTGCCCAA...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS-3UTR CAA 90 bp CCCAGCCACCTTTACAGGGAGCATCAGGACCAGGGCTTTCAAGAGCCACAAACTAGACAGTGCCCTGCCTaGGCTGTCAGGTCCACGGAG +
Preference number: 5 (lower is better)
Translates to: PSHLYREHQDQGFQEPQTRQCPA*AVRSTE
Trigger: CTCCGTGGACCTGACAGCCAAGGCAGGGCACTGTCT...AGTTTGTGGCTCTTGAAAGCCCTGGTCCTGATGCTCCCTGTAAAGGTGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp TTAGGAGCAGGCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCACGGCCCCGGCTGTTCTaGGCGAAGAAGATGGCCCAG +
Preference number: 5 (lower is better)
Translates to: LGAGGSRDSEPRILFCEPRPRLF*AKKMAQ
Trigger: CTGGGCCATCTTCTTCGCCAAGAACAGCCGGGGCCG...TGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGCCTGCTCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS-3UTR CAA 90 bp TTGCAAGCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAACTCGGGGAGGCCCGATaGCCCCGGTCCCAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: LQAASVHDATKVESTEVELGEAR*PRSQQP
Trigger: GGGCTGCTGGGACCGGGGCAATCGGGCCTCCCCGAG...TTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGCTTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp CCGTTAACTGCTGGTCTCCCTCCAAGCCGTCCTCACCCCAGGGTGCAGAAGAACAAGAGAGGAGCAGTATaGAGGAAGATCCTGGGTGAG +
Preference number: 5 (lower is better)
Translates to: PLTAGLPPSRPHPRVQKNKRGAV*RKILGE
Trigger: CTCACCCAGGATCTTCCTCAATACTGCTCCTCTCTT...GTTCTTCTGCACCCTGGGGTGAGGACGGCTTGGAGGGAGACCAGCAGTTAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp CCATTGCAAAGGGCCACAGGGTGGACACGAGAAAACAACACTACACACACAGAGAGACAGTGCCCTGCCTaGGCTGTCAGGTCCACGGAG +
Preference number: 5 (lower is better)
Translates to: PLQRATGWTRENNTTHTERQCPA*AVRSTE
Trigger: CTCCGTGGACCTGACAGCCAAGGCAGGGCACTGTCT...CTCTGTGTGTGTAGTGTTGTTTTCTCGTGTCCACCCTGTGGCCCTTTGCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp GCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTGCTAGAGGTACCAGCCCCTaGGAGGTCAGGATTGGGGTA +
Preference number: 5 (lower is better)
Translates to: AVLEILSPGSFSVNHARARGTSP*EVRIGV
Trigger: TACCCCAATCCTGACCTCCAAGGGGCTGGTACCTCT...AGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp GCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTGCTCAGATCTCCTACCCATaGCAAAGGGCCACAGGGTGG +
Preference number: 5 (lower is better)
Translates to: AVLEILSPGSFSVNHARAQISYP*QRATGW
Trigger: CCACCCTGTGGCCCTTTGCAATGGGTAGGAGATCTG...AGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACAGTCCCCGGATGTCTCTaGTCATCACCCTCAATGAGA +
Preference number: 5 (lower is better)
Translates to: PRILFCEPCTCWHWPQETVPGCL*SSPSMR
Trigger: TCTCATTGAGGGTGATGACAAGAGACATCCGGGGAC...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp CCATTGCAAAGGGCCACAGGGTGGACACGAGAAAACAACACTACACACACAGAGAGAGGTACCAGCCCCTaGGAGGTCAGGATTGGGGTA +
Preference number: 5 (lower is better)
Translates to: PLQRATGWTRENNTTHTERGTSP*EVRIGV
Trigger: TACCCCAATCCTGACCTCCAAGGGGCTGGTACCTCT...CTCTGTGTGTGTAGTGTTGTTTTCTCGTGTCCACCCTGTGGCCCTTTGCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp TTAGGAGCAGGCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCACAGATCTCCTACCCATaGCAAAGGGCCACAGGGTGG +
Preference number: 5 (lower is better)
Translates to: LGAGGSRDSEPRILFCEPQISYP*QRATGW
Trigger: CCACCCTGTGGCCCTTTGCAATGGGTAGGAGATCTG...TGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGCCTGCTCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCTTAACGGCCAGTGACTaGGCACTTCTGACCCTCCCT +
Preference number: 5 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSLTASD*ALLTLP
Trigger: AGGGAGGGTCAGAAGTGCCAAGTCACTGGCCGTTAA...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp GCGGTTCTCGAGATTCTGAGCCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGAAGTGGCAGCTCATaGGAACTTATCACAGCCTCC +
Preference number: 5 (lower is better)
Translates to: AVLEILSPGSFSVNHARAGSGSS*ELITAS
Trigger: GGAGGCTGTGATAAGTTCCAATGAGCTGCCACTTCC...AGCACGTGCATGGTTCACAGAAAAGGATCCTGGGCTCAGAATCTCGAGAACCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp CTTGTCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCGGAAGTGGCAGCTCATaGGAACTTATCACAGCCTCC +
Preference number: 5 (lower is better)
Translates to: LVITLNERKRESSAACLGGSGSS*ELITAS
Trigger: GGAGGCTGTGATAAGTTCCAATGAGCTGCCACTTCC...GCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACACTGAGCACACAGTGGTaGACCCACATGTGTAAAAGA +
Preference number: 5 (lower is better)
Translates to: PRILFCEPCTCWHWPQETLSTQW*THMCKR
Trigger: TCTTTTACACATGTGGGTCAACCACTGTGTGCTCAG...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCGAGTATTTCCTGGCCTaGTTAGCTGCTGTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSEYFLA*LAAVLL
Trigger: CAGGAGGACAGCAGCTAACAAGGCCAGGAAATACTC...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCAAGAGAGGAGCAGTATaGAGGAAGATCCTGGGTGAG +
Preference number: 5 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSKRGAV*RKILGE
Trigger: CTCACCCAGGATCTTCCTCAATACTGCTCCTCTCTT...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp CACAATGTCCTTTCACAGTCACTGAGATTAGGTAGCAGAGAAACACAGCAAAGCCCCCACCACATCCTGTaGAGGGTGGAGGGAAGTGAG +
Preference number: 5 (lower is better)
Translates to: HNVLSQSLRLGSRETQQSPHHIL*RVEGSE
Trigger: CTCACTTCCCTCCACCCTCAACAGGATGTGGTGGGG...GCTTTGCTGTGTTTCTCTGCTACCTAATCTCAGTGACTGTGAAAGGACATTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp CCCAGGATCCTTTTCTGTGAACCATGCACGTGCTGGCACTGGCCTCAGGAGACAACAGAGACATACACTTaGTATCTATCACCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: PRILFCEPCTCWHWPQETTETYT*YLSPGR
Trigger: TCTTCCAGGTGATAGATACAAAGTGTATGTCTCTGT...TGTCTCCTGAGGCCAGTGCCAGCACGTGCATGGTTCACAGAAAAGGATCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp CATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGGAACTTATCACAGTTAACGGCCAGTGACTaGGCACTTCTGACCCTCCCT +
Preference number: 5 (lower is better)
Translates to: HQLLDISREVAAHWNLSQLTASD*ALLTLP
Trigger: AGGGAGGGTCAGAAGTGCCAAGTCACTGGCCGTTAA...CTGTGATAAGTTCCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp CTTGTCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCGACTGGAAGCACAGATaGTGCATGGAGTGTAAACAT +
Preference number: 5 (lower is better)
Translates to: LVITLNERKRESSAACLGDWKHR*CMECKH
Trigger: ATGTTTACACTCCATGCACAATCTGTGCTTCCAGTC...GCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp ACAAACAGTACAGAGATTTTACAGTCAGGGAGGCCCAGCAGGAGATGGCCATCCCTGAGCACACAGTGGTaGACCCACATGTGTAAAAGA +
Preference number: 5 (lower is better)
Translates to: TNSTEILQSGRPSRRWPSLSTQW*THMCKR
Trigger: TCTTTTACACATGTGGGTCAACCACTGTGTGCTCAG...GGATGGCCATCTCCTGCTGGGCCTCCCTGACTGTAAAATCTCTGTACTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp GCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCGTCCCCGGATGTCTCTaGTCATCACCCTCAATGAGA +
Preference number: 5 (lower is better)
Translates to: AASVHDATKVESTEVEMLVPGCL*SSPSMR
Trigger: TCTCATTGAGGGTGATGACAAGAGACATCCGGGGAC...GAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp CATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGGAACTTATCACAGGAGTATTTCCTGGCCTaGTTAGCTGCTGTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: HQLLDISREVAAHWNLSQEYFLA*LAAVLL
Trigger: CAGGAGGACAGCAGCTAACAAGGCCAGGAAATACTC...CTGTGATAAGTTCCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp GCTATTACTCTAAGCCCAGATCCGACCCAGTCGGCACCAAACCACAGGAAGGATTTTTGTCTTCATTTTTaGCAAGCAGCATCAGTGCAT +
Preference number: 5 (lower is better)
Translates to: AITLSPDPTQSAPNHRKDFCLHF*QAASVH
Trigger: ATGCACTGATGCTGCTTGCAAAAAATGAAGACAAAA...ATCCTTCCTGTGGTTTGGTGCCGACTGGGTCGGATCTGGGCTTAGAGTAATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp CTTGTCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCTTTTGTCTTCATTTTTaGCAAGCAGCATCAGTGCAT +
Preference number: 5 (lower is better)
Translates to: LVITLNERKRESSAACLGFCLHF*QAASVH
Trigger: ATGCACTGATGCTGCTTGCAAAAAATGAAGACAAAA...GCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp GCTATTACTCTAAGCCCAGATCCGACCCAGTCGGCACCAAACCACAGGAAGGATAAAATAAGTAAGGATTaGGGGACTAACAGAGAGGAA +
Preference number: 5 (lower is better)
Translates to: AITLSPDPTQSAPNHRKDKISKD*GTNREE
Trigger: TTCCTCTCTGTTAGTCCCCAAATCCTTACTTATTTT...ATCCTTCCTGTGGTTTGGTGCCGACTGGGTCGGATCTGGGCTTAGAGTAATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp TCATCACCCTCAATGAGAGGAAGAGGGAAAGTTCTGCAGCCTGCCTTGGCCCTAAAAATAAGTAAGGATTaGGGGACTAACAGAGAGGAA +
Preference number: 5 (lower is better)
Translates to: SSPSMRGRGKVLQPALALKISKD*GTNREE
Trigger: TTCCTCTCTGTTAGTCCCCAAATCCTTACTTATTTT...TAGGGCCAAGGCAGGCTGCAGAACTTTCCCTCTTCCTCTCATTGAGGGTGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp CATCAGCTTCTTGACATATCCAGGGAAGTGGCAGCTCATTGGAACTTATCACAGAAGAAAGGGTGCAGTTaGGTCCTTAGAGAATGGATC +
Preference number: 5 (lower is better)
Translates to: HQLLDISREVAAHWNLSQKKGCS*VLREWI
Trigger: GATCCATTCTCTAAGGACCAAACTGCACCCTTTCTT...CTGTGATAAGTTCCAATGAGCTGCCACTTCCCTGGATATGTCAAGAAGCTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp GCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAATGCTCGACTGGAAGCACAGATaGTGCATGGAGTGTAAACAT +
Preference number: 5 (lower is better)
Translates to: AASVHDATKVESTEVEMLDWKHR*CMECKH
Trigger: ATGTTTACACTCCATGCACAATCTGTGCTTCCAGTC...GAGCATTTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp TTGCAAGCAGCATCAGTGCATGATGCAACAAAAGTTGAAAGCACGGAGGTAGAAAAGAAAGGGTGCAGTTaGGTCCTTAGAGAATGGATC +
Preference number: 5 (lower is better)
Translates to: LQAASVHDATKVESTEVEKKGCS*VLREWI
Trigger: GATCCATTCTCTAAGGACCAAACTGCACCCTTTCTT...TTCTACCTCCGTGCTTTCAACTTTTGTTGCATCATGCACTGATGCTGCTTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS-3UTR CAA 90 bp CACAATGTCCTTTCACAGTCACTGAGATTAGGTAGCAGAGAAACACAGCAAAGCACAGAGACATACACTTaGTATCTATCACCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: HNVLSQSLRLGSRETQQSTETYT*YLSPGR
Trigger: TCTTCCAGGTGATAGATACAAAGTGTATGTCTCTGT...GCTTTGCTGTGTTTCTCTGCTACCTAATCTCAGTGACTGTGAAAGGACATTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS CCA 72 bp ACTCGCACCTGGGCCGGGCGGCGGCGAGATCCGGACTaGAGCCACTGGACTGGGCGAGCCGGGCCGGGCGGC +
Preference number: 6 (lower is better)
Translates to: TRTWAGRRRDPD*SHWTGRAGPGG
Trigger: GCCGCCCGGCCCGGCTCGCCCAGTCCAGTGGCTCCAGTCCGGATCTCGCCGCCGCCCGGCCCAGGTGCGAGT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS CCA 72 bp GGGCCCGCCGCCTCCCCAGCAGTGGGGACTCGCACCTaGGCCGGGCGGCGGCGAGATCCGGACTGGAGCCAC +
Preference number: 6 (lower is better)
Translates to: GPAASPAVGTRT*AGRRRDPDWSH
Trigger: GTGGCTCCAGTCCGGATCTCGCCGCCGCCCGGCCCAGGTGCGAGTCCCCACTGCTGGGGAGGCGGCGGGCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS CCA 72 bp AGCACCACCTGGGCCGGGCGGCGGCGAGATCCGGACTaGAGCCACTGGACTGGGCGAGCCGGGCCGGGCGGC +
Preference number: 6 (lower is better)
Translates to: STTWAGRRRDPD*SHWTGRAGPGG
Trigger: GCCGCCCGGCCCGGCTCGCCCAGTCCAGTGGCTCCAGTCCGGATCTCGCCGCCGCCCGGCCCAGGTGGTGCT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399875.1
CDS GCA 72 bp CGCCGCCTCCCCCGCGGCTGGTGCTGGTGCTGGTGCTaGTGTCGCCGGAGCCTCTCCGGCCGCGGAAGGAGC +
Preference number: 6 (lower is better)
Translates to: RRLPRGWCWCWC*CRRSLSGRGRS
Trigger: GCTCCTTCCGCGGCCGGAGAGGCTCCGGCGACAGCAGCACCAGCACCAGCACCAGCCGCGGGGGAGGCGGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS CCA 72 bp CACGTGCCCAGGAAGCATCCGGCCGCGCGGTGCCGCTaGGGCTGCAGCAGCAGGGGTCCTGCCGATCCCGGG +
Preference number: 6 (lower is better)
Translates to: HVPRKHPAARCR*GCSSRGPADPG
Trigger: CCCGGGATCGGCAGGACCCCTGCTGCTGCAGCCCCAGCGGCACCGCGCGGCCGGATGCTTCCTGGGCACGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS GCA 72 bp CCGCGGCGCCCCCGCCGAAGTCCGCGGCTGTCATGCTaGAGGAGGAGGTGGGCGTGGAGGTGGAGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: PRRPRRSPRLSC*RRRWAWRWRRR
Trigger: CCTCCTCCTCCACCTCCACGCCCACCTCCTCCTGCAGCATGACAGCCGCGGACTTCGGCGGGGGCGCCGCGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS CAA 90 bp TTGTGCGCGCCGCTGGCTGCGCCGCCCCGACGGCCCCGGCTGTTCTaGGCGAAGAAGATGGCCCAGCCCACCACCACCACCAGGTCAGTG +
Preference number: 6 (lower is better)
Translates to: LCAPLAAPPRRPRLF*AKKMAQPTTTTRSV
Trigger: CACTGACCTGGTGGTGGTGGTGGGCTGGGCCATCTTCTTCGCCAAGAACAGCCGGGGCCGTCGGGGCGGCGCAGCCAGCGGCGCGCACAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS CCA 72 bp CGCCGAAGTCCGCGGCTGTCATGCTGCAGGAGGAGGTaGGCGTGGAGGTGGAGGAGGAGGTGGCCGCTGAGG +
Preference number: 6 (lower is better)
Translates to: RRSPRLSCCRRR*AWRWRRRWPLR
Trigger: CCTCAGCGGCCACCTCCTCCTCCACCTCCACGCCCACCTCCTCCTGCAGCATGACAGCCGCGGACTTCGGCG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS TCA 72 bp CCAAGCTGTAGAGCAGGGGCACCGACAGCGCCATGGTaGGACGGAAGCCCGTGGTGCCGAAGGGCGCGCGTA +
Preference number: 6 (lower is better)
Translates to: PSCRAGAPTAPW*DGSPWCRRARV
Trigger: TACGCGCGCCCTTCGGCACCACGGGCTTCCGTCTCACCATGGCGCTGTCGGTGCCCCTGCTCTACAGCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS TCA 72 bp GCGGCACGCGGCCCTCCAGCATCAGCTCCACCAGCGTaGAGCTGTCGAGCAGGTCCAAGCACGTGCCCAGGA +
Preference number: 6 (lower is better)
Translates to: AARGPPASAPPA*SCRAGPSTCPG
Trigger: TCCTGGGCACGTGCTTGGACCTGCTCGACAGCTTCACGCTGGTGGAGCTGATGCTGGAGGGCCGCGTGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1
CDS CCA 72 bp AGTCCGCGGCTGTCATGCTGCAGGAGGAGGTGGGCGTaGAGGTGGAGGAGGAGGTGGCCGCTGAGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: SPRLSCCRRRWA*RWRRRWPLRRR
Trigger: TCTCCTCCTCAGCGGCCACCTCCTCCTCCACCTCCACGCCCACCTCCTCCTGCAGCATGACAGCCGCGGACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331437.4
CDS TCA 72 bp GGAAGCCCGTGGTGCCGAAGGGCGCGCGTAGCTCGATaGGGTCTAGGATGGACGTGCCCAGGATCAGCACCA +
Preference number: 6 (lower is better)
Translates to: GSPWCRRARVAR*GLGWTCPGSAP
Trigger: TGGTGCTGATCCTGGGCACGTCCATCCTAGACCTCATCGAGCTACGCGCGCCCTTCGGCACCACGGGCTTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331437.4
ENST00000399875.1