RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM117 (Homo sapiens)

Ensembl gene IDs: ENSG00000139173

Ensembl transcript IDs: ENST00000266534.8, ENST00000546387.1, ENST00000546868.5, ENST00000546978.1, ENST00000551577.5, ENST00000553253.5

Found 298 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGACCTGATGCAAACCAAAGAAGGGTCATTCAAGGGGTCTTCTACTaGAGCCTGGGTGTTTTCTCGAGTGATTCCCATGTCTTTGCTATG +
Preference number: 1 (lower is better)
Translates to: RPDANQRRVIQGVFY*SLGVFSSDSHVFAM
Trigger: CATAGCAAAGACATGGGAATCACTCGAGAAAACACCCAGGCTTCAGTAGAAGACCCCTTGAATGACCCTTCTTTGGTTTGCATCAGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR CCA 90 bp AGTCTATCTCCGAGTCTAGTTCGTAGGTGTACTTTTAGAAGTCGTTaGGTCTTGATCAGCTTCTGTTGCACTAGTAGATTCGTTCAACTG +
Preference number: 1 (lower is better)
Translates to: SLSPSLVRRCTFRSR*VLISFCCTSRFVQL
Trigger: CAGTTGAACGAATCTACTAGTGCAACAGAAGCTGATCAAGACCCAACGACTTCTAAAAGTACACCTACGAACTAGACTCGGAGATAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR TCA 90 bp AACATGTCTCCCTCAACATATGTTTTATTAGTCCGAGGGTTAGTGTaGTTGGACCTCCATTCCCAGGATAGCTTGGTTCTGTTCAAATCT +
Preference number: 1 (lower is better)
Translates to: NMSPSTYVLLVRGLV*LDLHSQDSLVLFKS
Trigger: AGATTTGAACAGAACCAAGCTATCCTGGGAATGGAGGTCCAATCACACTAACCCTCGGACTAATAAAACATATGTTGAGGGAGACATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR TCA 90 bp AAGTCACCAACTCTGCTGCTGAATAAGAAACCAAGAGATACTTCCTaGGTCACATTTAGCTATTTCTGTTTTCTGCTCAGACATCAAGTG +
Preference number: 1 (lower is better)
Translates to: KSPTLLLNKKPRDTS*VTFSYFCFLLRHQV
Trigger: CACTTGATGTCTGAGCAGAAAACAGAAATAGCTAAATGTGACTCAGGAAGTATCTCTTGGTTTCTTATTCAGCAGCAGAGTTGGTGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR GCA 90 bp ATGGTTGAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATaGTGTAAAGTCAGTAATAGCTTGTGCAATTGTGAAAAGCAATCT +
Preference number: 1 (lower is better)
Translates to: MVEHQIHGSSANLPL*CKVSNSLCNCEKQS
Trigger: AGATTGCTTTTCACAATTGCACAAGCTATTACTGACTTTACAGCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTCAACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR CCA 90 bp ATCCAGAGCCATATTTGCAGAAAGATATACGAATATTGTAAATGGTaGGATGTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTT +
Preference number: 1 (lower is better)
Translates to: IQSHICRKIYEYCKW*DVLLSYDENFSSLV
Trigger: AACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTTACAATATTCGTATATCTTTCTGCAAATATGGCTCTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR TCA 90 bp CCAGGGAGATTTACATCAACATCTCCCATGAAATGTGGGAATTCCCAGTCCTGCGTCCGAGGGTTAGTGTaGTTGGACCTCCATTCCCAG +
Preference number: 2 (lower is better)
Translates to: PGRFTSTSPMKCGNSQSCVRGLV*LDLHSQ
Trigger: CTGGGAATGGAGGTCCAATCACACTAACCCTCGGAC...GCAGGACTGGGAATTCCCACATTTCATGGGAGATGTTGATGTAAATCTCCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546868.5
3UTR CAA 90 bp CCAAACCACACAAAGGCTATCAGGCTTGGAACAAAGGCCAGACACTaGACATCAAGACTGGCTCCTATGAACCTGCTGTGTAAGAACATG +
Preference number: 2 (lower is better)
Translates to: PNHTKAIRLGTKARH*TSRLAPMNLLCKNM
Trigger: CATGTTCTTACACAGCAGGTTCATAGGAGCCAGTCTTGATGTCAAGTGTCTGGCCTTTGTTCCAAGCCTGATAGCCTTTGTGTGGTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR TCA 90 bp GGAACAAAGGCCAGACACTTGACATCAAGACTGGCTCCTATGAACCTGCTGTGTCTAGAAAAAGCATGTTaGGCACCGTTGTGGCATTGT +
Preference number: 2 (lower is better)
Translates to: GTKARHLTSRLAPMNLLCLEKAC*APLWHC
Trigger: ACAATGCCACAACGGTGCTCAACATGCTTTTTCTAG...ACACAGCAGGTTCATAGGAGCCAGTCTTGATGTCAAGTGTCTGGCCTTTGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR TCA 90 bp CCAAACCACACAAAGGCTATCAGGCTTGGAACAAAGGCCAGACACTTGACATCAAGGCACCACTATGGTTaGACATCAGATACATGGGTC +
Preference number: 2 (lower is better)
Translates to: PNHTKAIRLGTKARHLTSRHHYG*TSDTWV
Trigger: GACCCATGTATCTGATGTTCAACCATAGTGGTGCCT...TGATGTCAAGTGTCTGGCCTTTGTTCCAAGCCTGATAGCCTTTGTGTGGTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR TCA 90 bp TCTGTTGCACTAGTAGATTCGTTCAACTGTGAGCTCAAGTTTTCCGAGGTTAGGCAAGGGGTCTTCTACTaGAGCCTGGGTGTTTTCTCG +
Preference number: 2 (lower is better)
Translates to: SVALVDSFNCELKFSEVRQGVFY*SLGVFS
Trigger: CGAGAAAACACCCAGGCTTCAGTAGAAGACCCCTTG...CCTAACCTCGGAAAACTTGAGCTCACAGTTGAACGAATCTACTAGTGCAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR CAA 90 bp AATGCTCTGGAAACTTCATCACTGGGCAAAAATCCCCGATTCAGCTaGTCCCAGCTGATCCAGTCCGTTGTAATCACAAGTACAACCACA +
Preference number: 2 (lower is better)
Translates to: NALETSSLGKNPRFS*SQLIQSVVITSTTT
Trigger: TGTGGTTGTACTTGTGATTACAACGGACTGGATCAGCTGGGACAAGCTGAATCGGGGATTTTTGCCCAGTGATGAAGTTTCCAGAGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546868.5
3UTR-3UTR CCA 90 bp CCAAACCACACAAAGGCTATCAGGCTTGGAACAAAGGCCAGACACTTGACATCATCTTCTACTGAAGCCTaGGTGTTTTCTCGAGTGATT +
Preference number: 2 (lower is better)
Translates to: PNHTKAIRLGTKARHLTSSSTEA*VFSRVI
Trigger: AATCACTCGAGAAAACACCCAGGCTTCAGTAGAAGA...TGATGTCAAGTGTCTGGCCTTTGTTCCAAGCCTGATAGCCTTTGTGTGGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR CAA 90 bp TCATGCACGGCTTCTCTACCTGACAAGGTTCCGCTGCATGATTTTTaGAGGAGTTCCCTTGCTCAGGGTTGGCATATGTTTTTCAATTTT +
Preference number: 2 (lower is better)
Translates to: SCTASLPDKVPLHDF*RSSLAQGWHMFFNF
Trigger: AAAATTGAAAAACATATGCCAACCCTGAGCAAGGGAACTCCTCAAAAAATCATGCAGCGGAACCTTGTCAGGTAGAGAAGCCGTGCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR TCA 90 bp TACGAATATTGTAAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTGTCCGAGGGTTAGTGTaGTTGGACCTCCATTCCCAG +
Preference number: 2 (lower is better)
Translates to: YEYCKWWDVLLSYDENFSVRGLV*LDLHSQ
Trigger: CTGGGAATGGAGGTCCAATCACACTAACCCTCGGAC...ACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTTACAATATTCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CCA 90 bp GTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTTGTCTGGGACTTTGTGAAGCAAGGAATGCTCTaGAAACTTCATCACTGGGCA +
Preference number: 2 (lower is better)
Translates to: VLLSYDENFSSLVVWDFVKQGML*KLHHWA
Trigger: TGCCCAGTGATGAAGTTTCCAGAGCATTCCTTGCTT...CACAAAGTCCCAGACAACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546868.5
3UTR-3UTR TCA 90 bp CTTGTAGACGATCTCATTGAAGTCAGACCTGATGCAAACCAAAGAAGGGTCATTGGGTGTTTTCTCGAGTaGTTCCCATGTCTTTGCTAT +
Preference number: 2 (lower is better)
Translates to: LVDDLIEVRPDANQRRVIGCFLE*FPCLCY
Trigger: ATAGCAAAGACATGGGAATCACTCGAGAAAACACCC...AATGACCCTTCTTTGGTTTGCATCAGGTCTGACTTCAATGAGATCGTCTACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR TCA 90 bp GTAAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTTGGGGTGTTTTCTCGAGTaGTTCCCATGTCTTTGCTAT +
Preference number: 2 (lower is better)
Translates to: VNGGMCCSHMMKTSVPWLGCFLE*FPCLCY
Trigger: ATAGCAAAGACATGGGAATCACTCGAGAAAACACCC...CAACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR TCA 90 bp TCTGGTACAGTTAAAAACAGTTTAATGTCTCAAGGCACCACTATGGTTGAACATCAAGGGGTCTTCTACTaGAGCCTGGGTGTTTTCTCG +
Preference number: 2 (lower is better)
Translates to: SGTVKNSLMSQGTTMVEHQGVFY*SLGVFS
Trigger: CGAGAAAACACCCAGGCTTCAGTAGAAGACCCCTTG...ATGTTCAACCATAGTGGTGCCTTGAGACATTAAACTGTTTTTAACTGTACCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR TCA 90 bp TCTGGTACAGTTAAAAACAGTTTAATGTCTCAAGGCACCACTATGGTTGAACATATCTTGAACTGCATGTaGGGGGTGTGCAAACCAGGG +
Preference number: 2 (lower is better)
Translates to: SGTVKNSLMSQGTTMVEHILNCM*GVCKPG
Trigger: CCCTGGTTTGCACACCCCTCACATGCAGTTCAAGAT...ATGTTCAACCATAGTGGTGCCTTGAGACATTAAACTGTTTTTAACTGTACCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546868.5
3UTR-3UTR GCA 90 bp ACCACTATGGTTGAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCTTTGAGGAGTTCCCTTaGTCAGGGTTGGCATATGTT +
Preference number: 2 (lower is better)
Translates to: TTMVEHQIHGSSANLPLCFEEFP*SGLAYV
Trigger: AACATATGCCAACCCTGAGCAAGGGAACTCCTCAAA...GCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTCAACCATAGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR GCA 90 bp ACCACTATGGTTGAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCACTGTATATATCTTCTaGCCCGGGCCGATATATTGC +
Preference number: 2 (lower is better)
Translates to: TTMVEHQIHGSSANLPLCTVYIF*PGPIYC
Trigger: GCAATATATCGGCCCGGGGCAGAAGATATATACAGT...GCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTCAACCATAGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CCA 90 bp AGACTTGTAGACGATCTCATTGAAGTCAGACCTGATGCAAACCAAAGAAGGGTCCTCAAGGCACCACTATaGTTGAACATCAGATACATG +
Preference number: 2 (lower is better)
Translates to: RLVDDLIEVRPDANQRRVLKAPL*LNIRYM
Trigger: CATGTATCTGATGTTCAACCATAGTGGTGCCTTGAG...GACCCTTCTTTGGTTTGCATCAGGTCTGACTTCAATGAGATCGTCTACAAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR TCA 90 bp AACAAGACATTAAACAAATTCTTTCATGCACGGCTTCTCTACCTGACAAGGTTCTCTCTAGAGGACTGTTaGGTATACAGTAGGCACGTG +
Preference number: 2 (lower is better)
Translates to: NKTLNKFFHARLLYLTRFSLEDC*VYSRHV
Trigger: CACGTGCCTACTGTATACTCAACAGTCCTCTAGAGA...GAACCTTGTCAGGTAGAGAAGCCGTGCATGAAAGAATTTGTTTAATGTCTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR TCA 90 bp ATGAACCTGCTGTGTAAGAACATGTCTCCCTCAACATATGTTTTATTAGTCCGACCAGAAAGCTCTTGCTaGTTTTCCCCAGTCAGGATA +
Preference number: 2 (lower is better)
Translates to: MNLLCKNMSPSTYVLLVRPESSC*FSPVRI
Trigger: TATCCTGACTGGGGAAAATCAGCAAGAGCTTTCTGG...TCGGACTAATAAAACATATGTTGAGGGAGACATGTTCTTACACAGCAGGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546868.5
3UTR-3UTR TCA 90 bp TTTGAGGAGTTCCCTTGCTCAGGGTTGGCATATGTTTTTCAATTTTCACTATCCCATCAACATCTCCCATaGAATGTGGGAATTCCCAGT +
Preference number: 2 (lower is better)
Translates to: FEEFPCSGLAYVFQFSLSHQHLP*NVGIPS
Trigger: ACTGGGAATTCCCACATTTCATGGGAGATGTTGATG...GGATAGTGAAAATTGAAAAACATATGCCAACCCTGAGCAAGGGAACTCCTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546868.5
3UTR-3UTR TCA 90 bp AGACTTGTAGACGATCTCATTGAAGTCAGACCTGATGCAAACCAAAGAAGGGTCCATTTGCCTGTTATGTaGATACGATATTCCTCCTTG +
Preference number: 2 (lower is better)
Translates to: RLVDDLIEVRPDANQRRVHLPVM*IRYSSL
Trigger: CAAGGAGGAATATCGTATTCACATAACAGGCAAATG...GACCCTTCTTTGGTTTGCATCAGGTCTGACTTCAATGAGATCGTCTACAAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546868.5
3UTR-3UTR GCA 90 bp GTGGGAGAAAGTCACATTTCACGAGTAGTGACCCATGTTGGGTTATGGATCTCCGTCAGTAATAGCTTGTaGAATTGTGAAAAGCAATCT +
Preference number: 2 (lower is better)
Translates to: VGESHISRVVTHVGLWISVSNSL*NCEKQS
Trigger: AGATTGCTTTTCACAATTGCACAAGCTATTACTGAC...GGAGATCCATAACCCAACATGGGTCACTACTCGTGAAATGTGACTTTCTCCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CCA 90 bp CAAGACATTAAACAAATTCTTTCATGCACGGCTTCTCTACCTGACAAGGTTCCGCTCAAGGCACCACTATaGTTGAACATCAGATACATG +
Preference number: 2 (lower is better)
Translates to: QDIKQILSCTASLPDKVPLKAPL*LNIRYM
Trigger: CATGTATCTGATGTTCAACCATAGTGGTGCCTTGAG...CGGAACCTTGTCAGGTAGAGAAGCCGTGCATGAAAGAATTTGTTTAATGTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CCA 90 bp GTGGGAGAAAGTCACATTTCACGAGTAGTGACCCATGTTGGGTTATGGATCTCCATTCCCAGGATAGCTTaGTTCTGTTCAAATCTTTTA +
Preference number: 2 (lower is better)
Translates to: VGESHISRVVTHVGLWISIPRIA*FCSNLL
Trigger: TAAAAGATTTGAACAGAACCAAGCTATCCTGGGAAT...GGAGATCCATAACCCAACATGGGTCACTACTCGTGAAATGTGACTTTCTCCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CCA 90 bp GAACATGTCTCCCTCAACATATGTTTTATTAGTCCGAGGGTTAGTGTGATTGGAAAAGGCTATCAGGCTTaGAACAAAGGCCAGACACTT +
Preference number: 2 (lower is better)
Translates to: EHVSLNICFISPRVSVIGKGYQA*NKGQTL
Trigger: AAGTGTCTGGCCTTTGTTCCAAGCCTGATAGCCTTT...TCCAATCACACTAACCCTCGGACTAATAAAACATATGTTGAGGGAGACATGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CCA 90 bp GTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTTGTCTGGGACTTTGTGACTTTTAGAAGTCGTTaGGTCTTGATCAGCTTCTGT +
Preference number: 2 (lower is better)
Translates to: VLLSYDENFSSLVVWDFVTFRSR*VLISFC
Trigger: ACAGAAGCTGATCAAGACCCAACGACTTCTAAAAGT...CACAAAGTCCCAGACAACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CCA 90 bp AGACTTGTAGACGATCTCATTGAAGTCAGACCTGATGCAAACCAAAGAAGGGTCACTTTTAGAAGTCGTTaGGTCTTGATCAGCTTCTGT +
Preference number: 2 (lower is better)
Translates to: RLVDDLIEVRPDANQRRVTFRSR*VLISFC
Trigger: ACAGAAGCTGATCAAGACCCAACGACTTCTAAAAGT...GACCCTTCTTTGGTTTGCATCAGGTCTGACTTCAATGAGATCGTCTACAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CCA 90 bp ACCACTATGGTTGAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCTGGAAACTTCATCACTaGGCAAAAATCCCCGATTCA +
Preference number: 2 (lower is better)
Translates to: TTMVEHQIHGSSANLPLCWKLHH*AKIPDS
Trigger: TGAATCGGGGATTTTTGCCCAGTGATGAAGTTTCCA...GCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTCAACCATAGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546868.5
3UTR-3UTR TCA 90 bp CTAATCTTCCACTATGCTGTAAAGTCAGTAATAGCTTGTGCAATTGTGAAAAGCTCTCTAGAGGACTGTTaGGTATACAGTAGGCACGTG +
Preference number: 2 (lower is better)
Translates to: LIFHYAVKSVIACAIVKSSLEDC*VYSRHV
Trigger: CACGTGCCTACTGTATACTCAACAGTCCTCTAGAGA...GCTTTTCACAATTGCACAAGCTATTACTGACTTTACAGCATAGTGGAAGATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR TCA 90 bp AAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTTGTCCCAAGAGATACTTCCTaGGTCACATTTAGCTATTTC +
Preference number: 2 (lower is better)
Translates to: KWWDVLLSYDENFSSLVVPRDTS*VTFSYF
Trigger: GAAATAGCTAAATGTGACTCAGGAAGTATCTCTTGG...GACAACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR GCA 90 bp GTGTTATCTCCAAGTCTATCTCCGAGTCTAGTTCGTAGGTGTACTTTTAGAAGTATCACCATGTTTCTCTaGAGTCCAGTTGTCAAAGTC +
Preference number: 2 (lower is better)
Translates to: VLSPSLSPSLVRRCTFRSITMFL*SPVVKV
Trigger: GACTTTGACAACTGGACTGCAGAGAAACATGGTGAT...ACTTCTAAAAGTACACCTACGAACTAGACTCGGAGATAGACTTGGAGATAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR GCA 90 bp TTACACTCAAGGTTGCTTTTTGTGTTATCTCCAAGTCTATCTCCGAGTCTAGTTACTGTATATATCTTCTaGCCCGGGCCGATATATTGC +
Preference number: 2 (lower is better)
Translates to: LHSRLLFVLSPSLSPSLVTVYIF*PGPIYC
Trigger: GCAATATATCGGCCCGGGGCAGAAGATATATACAGT...AACTAGACTCGGAGATAGACTTGGAGATAACACAAAAAGCAACCTTGAGTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CCA 90 bp CTTTTAAACTTTCTGAGTCTTTCACTGTATATATCTTCTGCCCCGGGCCGATATCTCAAGGCACCACTATaGTTGAACATCAGATACATG +
Preference number: 2 (lower is better)
Translates to: LLNFLSLSLYISSAPGRYLKAPL*LNIRYM
Trigger: CATGTATCTGATGTTCAACCATAGTGGTGCCTTGAG...ATATCGGCCCGGGGCAGAAGATATATACAGTGAAAGACTCAGAAAGTTTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CCA 90 bp CTTGTAGACGATCTCATTGAAGTCAGACCTGATGCAAACCAAAGAAGGGTCATTAGTAGTGACCCATGTTaGGTTATGGATCTCCTATTA +
Preference number: 2 (lower is better)
Translates to: LVDDLIEVRPDANQRRVISSDPC*VMDLLL
Trigger: TAATAGGAGATCCATAACCCAACATGGGTCACTACT...AATGACCCTTCTTTGGTTTGCATCAGGTCTGACTTCAATGAGATCGTCTACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CCA 90 bp TTAAAAGGTGATCACCATGTTTCTCTGCAGTCCAGTTGTCAAAGTCACCAACTCTACGAATATTGTAAATaGTGGGATGTGCTGCTCTCA +
Preference number: 2 (lower is better)
Translates to: LKGDHHVSLQSSCQSHQLYEYCK*WDVLLS
Trigger: TGAGAGCAGCACATCCCACCATTTACAATATTCGTA...GAGTTGGTGACTTTGACAACTGGACTGCAGAGAAACATGGTGATCACCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR TCA 90 bp AAAACAATGAATCCTAGAAAAAGCATGTTGAGCACCGTTGTGGCATTGTTCATACTAGAAAAAGCATGTTaGGCACCGTTGTGGCATTGT +
Preference number: 2 (lower is better)
Translates to: KTMNPRKSMLSTVVALFILEKAC*APLWHC
Trigger: ACAATGCCACAACGGTGCTCAACATGCTTTTTCTAG...TATGAACAATGCCACAACGGTGCTCAACATGCTTTTTCTAGGATTCATTGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR TCA 90 bp TCTCATATGATGAAAACTTCAGTTCCTTGGTTGTCTGGGACTTTGTGTAAATGCCACCAACTCTGCTGCTaGATAAGAAACCAAGAGATA +
Preference number: 2 (lower is better)
Translates to: SHMMKTSVPWLSGTLCKCHQLCC*IRNQEI
Trigger: TATCTCTTGGTTTCTTATTCAGCAGCAGAGTTGGTG...GCATTTACACAAAGTCCCAGACAACCAAGGAACTGAAGTTTTCATCATATGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR GCA 90 bp AAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTTGTCGCTAATCTTCCACTATaGTGTAAAGTCAGTAATAGC +
Preference number: 2 (lower is better)
Translates to: KWWDVLLSYDENFSSLVVANLPL*CKVSNS
Trigger: GCTATTACTGACTTTACAGCATAGTGGAAGATTAGC...GACAACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR GCA 90 bp GTAAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTTGGCTATTTCTGTTTTCTaGTCAGACATCAAGTGTAGA +
Preference number: 2 (lower is better)
Translates to: VNGGMCCSHMMKTSVPWLAISVF*SDIKCR
Trigger: TCTACACTTGATGTCTGAGCAGAAAACAGAAATAGC...CAACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR GCA 90 bp ATCATCACCTCATTTCAATTACTGGTGGGAGAAAGTCACATTTCACGAGTAGTGGTAAATGGTGGGATGTaGTGCTCTCATATGATGAAA +
Preference number: 2 (lower is better)
Translates to: IITSFQLLVGESHISRVVVNGGM*CSHMMK
Trigger: TTTCATCATATGAGAGCAGCACATCCCACCATTTAC...CACTACTCGTGAAATGTGACTTTCTCCCACCAGTAATTGAAATGAGGTGATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR GCA 90 bp GTAAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTTGTTGATCAGCTTCTGTTaGACTAGTAGATTCGTTCAA +
Preference number: 2 (lower is better)
Translates to: VNGGMCCSHMMKTSVPWLLISFC*TSRFVQ
Trigger: TTGAACGAATCTACTAGTGCAACAGAAGCTGATCAA...CAACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR GCA 90 bp CCACTATGGTTGAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCTAAAAGAAGCAAGGAATaGTCTGGAAACTTCATCACT +
Preference number: 2 (lower is better)
Translates to: PLWLNIRYMGHQLIFHYAKRSKE*SGNFIT
Trigger: AGTGATGAAGTTTCCAGAGCATTCCTTGCTTCTTTT...AGCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTCAACCATAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546868.5
3UTR-3UTR CCA 90 bp GTGGGAAGACTTGTAGACGATCTCATTGAAGTCAGACCTGATGCAAACCAAAGAATTCCCAGGATAGCTTaGTTCTGTTCAAATCTTTTA +
Preference number: 2 (lower is better)
Translates to: VGRLVDDLIEVRPDANQRIPRIA*FCSNLL
Trigger: TAAAAGATTTGAACAGAACCAAGCTATCCTGGGAAT...TCTTTGGTTTGCATCAGGTCTGACTTCAATGAGATCGTCTACAAGTCTTCCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CCA 90 bp TACGAATATTGTAAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTATCTCCCATGAAATGTaGGAATTCCCAGTCCTGCAT +
Preference number: 2 (lower is better)
Translates to: YEYCKWWDVLLSYDENFSISHEM*EFPVLH
Trigger: ATGCAGGACTGGGAATTCCCACATTTCATGGGAGAT...ACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTTACAATATTCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546868.5
3UTR-3UTR TCA 90 bp AAAGTTACACTCAAGGTTGCTTTTTGTGTTATCTCCAAGTCTATCTCCGAGTCTTACAAAACGCCCATGTaGAATAGGTTAGGTAACTGT +
Preference number: 2 (lower is better)
Translates to: KVTLKVAFCVISKSISESYKTPM*NRLGNC
Trigger: ACAGTTACCTAACCTATTTCACATGGGCGTTTTGTA...AGACTCGGAGATAGACTTGGAGATAACACAAAAAGCAACCTTGAGTGTAACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR GCA 90 bp TCTGGTACAGTTAAAAACAGTTTAATGTCTCAAGGCACCACTATGGTTGAACATATCACCATGTTTCTCTaGAGTCCAGTTGTCAAAGTC +
Preference number: 2 (lower is better)
Translates to: SGTVKNSLMSQGTTMVEHITMFL*SPVVKV
Trigger: GACTTTGACAACTGGACTGCAGAGAAACATGGTGAT...ATGTTCAACCATAGTGGTGCCTTGAGACATTAAACTGTTTTTAACTGTACCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR GCA 90 bp TCTCATATGATGAAAACTTCAGTTCCTTGGTTGTCTGGGACTTTGTGTAAATGCGTAAATGGTGGGATGTaGTGCTCTCATATGATGAAA +
Preference number: 2 (lower is better)
Translates to: SHMMKTSVPWLSGTLCKCVNGGM*CSHMMK
Trigger: TTTCATCATATGAGAGCAGCACATCCCACCATTTAC...GCATTTACACAAAGTCCCAGACAACCAAGGAACTGAAGTTTTCATCATATGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR GCA 90 bp GACCCATGTTGGGTTATGGATCTCCTATTACTGAATTTTGCATCTGTATTTATATTTGAGGAGTTCCCTTaGTCAGGGTTGGCATATGTT +
Preference number: 2 (lower is better)
Translates to: DPCWVMDLLLLNFASVFIFEEFP*SGLAYV
Trigger: AACATATGCCAACCCTGAGCAAGGGAACTCCTCAAA...TATAAATACAGATGCAAAATTCAGTAATAGGAGATCCATAACCCAACATGGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CCA 90 bp AACAAGACATTAAACAAATTCTTTCATGCACGGCTTCTCTACCTGACAAGGTTCAGTAGTGACCCATGTTaGGTTATGGATCTCCTATTA +
Preference number: 2 (lower is better)
Translates to: NKTLNKFFHARLLYLTRFSSDPC*VMDLLL
Trigger: TAATAGGAGATCCATAACCCAACATGGGTCACTACT...GAACCTTGTCAGGTAGAGAAGCCGTGCATGAAAGAATTTGTTTAATGTCTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CCA 90 bp ATCATCACCTCATTTCAATTACTGGTGGGAGAAAGTCACATTTCACGAGTAGTGGAATATTGTAAATGGTaGGATGTGCTGCTCTCATAT +
Preference number: 2 (lower is better)
Translates to: IITSFQLLVGESHISRVVEYCKW*DVLLSY
Trigger: ATATGAGAGCAGCACATCCCACCATTTACAATATTC...CACTACTCGTGAAATGTGACTTTCTCCCACCAGTAATTGAAATGAGGTGATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CCA 90 bp TTTGAGGAGTTCCCTTGCTCAGGGTTGGCATATGTTTTTCAATTTTCACTATCCGAATATTGTAAATGGTaGGATGTGCTGCTCTCATAT +
Preference number: 2 (lower is better)
Translates to: FEEFPCSGLAYVFQFSLSEYCKW*DVLLSY
Trigger: ATATGAGAGCAGCACATCCCACCATTTACAATATTC...GGATAGTGAAAATTGAAAAACATATGCCAACCCTGAGCAAGGGAACTCCTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CCA 90 bp ATCATCACCTCATTTCAATTACTGGTGGGAGAAAGTCACATTTCACGAGTAGTGTCCCTTGCTCAGGGTTaGCATATGTTTTTCAATTTT +
Preference number: 2 (lower is better)
Translates to: IITSFQLLVGESHISRVVSLAQG*HMFFNF
Trigger: AAAATTGAAAAACATATGCCAACCCTGAGCAAGGGA...CACTACTCGTGAAATGTGACTTTCTCCCACCAGTAATTGAAATGAGGTGATGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CCA 90 bp GTGTTATCTCCAAGTCTATCTCCGAGTCTAGTTCGTAGGTGTACTTTTAGAAGTTCCCTTGCTCAGGGTTaGCATATGTTTTTCAATTTT +
Preference number: 2 (lower is better)
Translates to: VLSPSLSPSLVRRCTFRSSLAQG*HMFFNF
Trigger: AAAATTGAAAAACATATGCCAACCCTGAGCAAGGGA...ACTTCTAAAAGTACACCTACGAACTAGACTCGGAGATAGACTTGGAGATAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR TCA 90 bp AAAACAATGAATCCTAGAAAAAGCATGTTGAGCACCGTTGTGGCATTGTTCATATACAAAACGCCCATGTaGAATAGGTTAGGTAACTGT +
Preference number: 2 (lower is better)
Translates to: KTMNPRKSMLSTVVALFIYKTPM*NRLGNC
Trigger: ACAGTTACCTAACCTATTTCACATGGGCGTTTTGTA...TATGAACAATGCCACAACGGTGCTCAACATGCTTTTTCTAGGATTCATTGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR GCA 90 bp ATCATCACCTCATTTCAATTACTGGTGGGAGAAAGTCACATTTCACGAGTAGTGGTCAGTAATAGCTTGTaGAATTGTGAAAAGCAATCT +
Preference number: 2 (lower is better)
Translates to: IITSFQLLVGESHISRVVVSNSL*NCEKQS
Trigger: AGATTGCTTTTCACAATTGCACAAGCTATTACTGAC...CACTACTCGTGAAATGTGACTTTCTCCCACCAGTAATTGAAATGAGGTGATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR GCA 90 bp AACAAGACATTAAACAAATTCTTTCATGCACGGCTTCTCTACCTGACAAGGTTCTTGATCAGCTTCTGTTaGACTAGTAGATTCGTTCAA +
Preference number: 2 (lower is better)
Translates to: NKTLNKFFHARLLYLTRFLISFC*TSRFVQ
Trigger: TTGAACGAATCTACTAGTGCAACAGAAGCTGATCAA...GAACCTTGTCAGGTAGAGAAGCCGTGCATGAAAGAATTTGTTTAATGTCTTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CCA 90 bp TTACACTCAAGGTTGCTTTTTGTGTTATCTCCAAGTCTATCTCCGAGTCTAGTTGAATATTGTAAATGGTaGGATGTGCTGCTCTCATAT +
Preference number: 2 (lower is better)
Translates to: LHSRLLFVLSPSLSPSLVEYCKW*DVLLSY
Trigger: ATATGAGAGCAGCACATCCCACCATTTACAATATTC...AACTAGACTCGGAGATAGACTTGGAGATAACACAAAAAGCAACCTTGAGTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR TCA 90 bp GACCCATGTTGGGTTATGGATCTCCTATTACTGAATTTTGCATCTGTATTTATATACAAAACGCCCATGTaGAATAGGTTAGGTAACTGT +
Preference number: 2 (lower is better)
Translates to: DPCWVMDLLLLNFASVFIYKTPM*NRLGNC
Trigger: ACAGTTACCTAACCTATTTCACATGGGCGTTTTGTA...TATAAATACAGATGCAAAATTCAGTAATAGGAGATCCATAACCCAACATGGGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR TCA 90 bp GACCCATGTTGGGTTATGGATCTCCTATTACTGAATTTTGCATCTGTATTTATACCAAGAGATACTTCCTaGGTCACATTTAGCTATTTC +
Preference number: 2 (lower is better)
Translates to: DPCWVMDLLLLNFASVFIPRDTS*VTFSYF
Trigger: GAAATAGCTAAATGTGACTCAGGAAGTATCTCTTGG...TATAAATACAGATGCAAAATTCAGTAATAGGAGATCCATAACCCAACATGGGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR GCA 90 bp AACAAGACATTAAACAAATTCTTTCATGCACGGCTTCTCTACCTGACAAGGTTCGTCAGTAATAGCTTGTaGAATTGTGAAAAGCAATCT +
Preference number: 2 (lower is better)
Translates to: NKTLNKFFHARLLYLTRFVSNSL*NCEKQS
Trigger: AGATTGCTTTTCACAATTGCACAAGCTATTACTGAC...GAACCTTGTCAGGTAGAGAAGCCGTGCATGAAAGAATTTGTTTAATGTCTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR GCA 90 bp TTTGCAGAAAGATATACGAATATTGTAAATGGTGGGATGTGCTGCTCTCATATGGCTAATCTTCCACTATaGTGTAAAGTCAGTAATAGC +
Preference number: 2 (lower is better)
Translates to: FAERYTNIVNGGMCCSHMANLPL*CKVSNS
Trigger: GCTATTACTGACTTTACAGCATAGTGGAAGATTAGC...CATATGAGAGCAGCACATCCCACCATTTACAATATTCGTATATCTTTCTGCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR GCA 90 bp TACGAATATTGTAAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTGCTATTTCTGTTTTCTaGTCAGACATCAAGTGTAGA +
Preference number: 2 (lower is better)
Translates to: YEYCKWWDVLLSYDENFSAISVF*SDIKCR
Trigger: TCTACACTTGATGTCTGAGCAGAAAACAGAAATAGC...ACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTTACAATATTCGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR TCA 72 bp GCAAACCAAAGAAGGGTCATTCAAGGGGTCTTCTACTaGAGCCTGGGTGTTTTCTCGAGTGATTCCCATGTC +
Preference number: 3 (lower is better)
Translates to: ANQRRVIQGVFY*SLGVFSSDSHV
Trigger: GACATGGGAATCACTCGAGAAAACACCCAGGCTTCAGTAGAAGACCCCTTGAATGACCCTTCTTTGGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp GTGGGAGAAAGTCACATTTCACGAGTAGTGACCCATGTTGGGTTATGGATCTCCTTCTCTGCAGTCCAGTaGTCAAAGTCACCAACTCTG +
Preference number: 3 (lower is better)
Translates to: VGESHISRVVTHVGLWISFSAVQ*SKSPTL
Trigger: CAGAGTTGGTGACTTTGACAACTGGACTGCAGAGAA...GGAGATCCATAACCCAACATGGGTCACTACTCGTGAAATGTGACTTTCTCCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp CTTTCTGAGTCTTTCACTGTATATATCTTCTGCCCCGGGCCGATATATTGCCCACAAAGGCTATCAGGCTaGGAACAAAGGCCAGACACT +
Preference number: 3 (lower is better)
Translates to: LSESFTVYIFCPGPIYCPQRLSG*EQRPDT
Trigger: AGTGTCTGGCCTTTGTTCCAAGCCTGATAGCCTTTG...TGGGCAATATATCGGCCCGGGGCAGAAGATATATACAGTGAAAGACTCAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp CAAGACATTAAACAAATTCTTTCATGCACGGCTTCTCTACCTGACAAGGTTCCGAATCCCCGATTCAGCTaGTCCCAGCTGATCCAGTCC +
Preference number: 3 (lower is better)
Translates to: QDIKQILSCTASLPDKVPNPRFS*SQLIQS
Trigger: GGACTGGATCAGCTGGGACAAGCTGAATCGGGGATT...CGGAACCTTGTCAGGTAGAGAAGCCGTGCATGAAAGAATTTGTTTAATGTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546868.5
3UTR-3UTR CAA 90 bp CTTTCTGAGTCTTTCACTGTATATATCTTCTGCCCCGGGCCGATATATTGCCCACCTAGAAAAAGCATGTaGAGCACCGTTGTGGCATTG +
Preference number: 3 (lower is better)
Translates to: LSESFTVYIFCPGPIYCPPRKSM*STVVAL
Trigger: CAATGCCACAACGGTGCTCAACATGCTTTTTCTAGG...TGGGCAATATATCGGCCCGGGGCAGAAGATATATACAGTGAAAGACTCAGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp GTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTTGTCTGGGACTTTGTGACAAAGGCCAGACACTaGACATCAAGACTGGCTCCT +
Preference number: 3 (lower is better)
Translates to: VLLSYDENFSSLVVWDFVTKARH*TSRLAP
Trigger: AGGAGCCAGTCTTGATGTCAAGTGTCTGGCCTTTGT...CACAAAGTCCCAGACAACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR TCA 72 bp CCCTCAACATATGTTTTATTAGTCCGAGGGTTAGTGTaGTTGGACCTCCATTCCCAGGATAGCTTGGTTCTG +
Preference number: 3 (lower is better)
Translates to: PSTYVLLVRGLV*LDLHSQDSLVL
Trigger: CAGAACCAAGCTATCCTGGGAATGGAGGTCCAATCACACTAACCCTCGGACTAATAAAACATATGTTGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR TCA 72 bp AGGGGTCTTCTACTGAAGCCTGGGTGTTTTCTCGAGTaGTTCCCATGTCTTTGCTATGTTCTGATGGAGATT +
Preference number: 3 (lower is better)
Translates to: RGLLLKPGCFLE*FPCLCYVLMEI
Trigger: AATCTCCATCAGAACATAGCAAAGACATGGGAATCACTCGAGAAAACACCCAGGCTTCAGTAGAAGACCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR CCA 72 bp AAAGAAGGGTCATTCAAGGGGTCTTCTACTGAAGCCTaGGTGTTTTCTCGAGTGATTCCCATGTCTTTGCTA +
Preference number: 3 (lower is better)
Translates to: KEGSFKGSSTEA*VFSRVIPMSLL
Trigger: TAGCAAAGACATGGGAATCACTCGAGAAAACACCCAGGCTTCAGTAGAAGACCCCTTGAATGACCCTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp GTGGGAGAAAGTCACATTTCACGAGTAGTGACCCATGTTGGGTTATGGATCTCCAGCACCGTTGTGGCATaGTTCATATTTTTACCTAAC +
Preference number: 3 (lower is better)
Translates to: VGESHISRVVTHVGLWISSTVVA*FIFLPN
Trigger: GTTAGGTAAAAATATGAACAATGCCACAACGGTGCT...GGAGATCCATAACCCAACATGGGTCACTACTCGTGAAATGTGACTTTCTCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp AGACTTGTAGACGATCTCATTGAAGTCAGACCTGATGCAAACCAAAGAAGGGTCAAGGCACCACTATGGTaGAACATCAGATACATGGGT +
Preference number: 3 (lower is better)
Translates to: RLVDDLIEVRPDANQRRVKAPLW*NIRYMG
Trigger: ACCCATGTATCTGATGTTCAACCATAGTGGTGCCTT...GACCCTTCTTTGGTTTGCATCAGGTCTGACTTCAATGAGATCGTCTACAAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp GAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCTGTAAAGTCAGTCCCCGGGCCGATATATaGCCCATATTCATGAGGTTT +
Preference number: 3 (lower is better)
Translates to: EHQIHGSSANLPLCCKVSPRADI*PIFMRF
Trigger: AAACCTCATGAATATGGGCAATATATCGGCCCGGGG...ACTGACTTTACAGCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp TCTGTTGCACTAGTAGATTCGTTCAACTGTGAGCTCAAGTTTTCCGAGGTTAGGAGTGTAAGTTTTGTCTaGATTCTCCATGCGTGGCTC +
Preference number: 3 (lower is better)
Translates to: SVALVDSFNCELKFSEVRSVSFV*ILHAWL
Trigger: GAGCCACGCATGGAGAATCAAGACAAAACTTACACT...CCTAACCTCGGAAAACTTGAGCTCACAGTTGAACGAATCTACTAGTGCAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp TCTTCTACTGAAGCCTGGGTGTTTTCTCGAGTGATTCCCATGTCTTTGCTATGTAGTGTAAGTTTTGTCTaGATTCTCCATGCGTGGCTC +
Preference number: 3 (lower is better)
Translates to: SSTEAWVFSRVIPMSLLCSVSFV*ILHAWL
Trigger: GAGCCACGCATGGAGAATCAAGACAAAACTTACACT...ACATAGCAAAGACATGGGAATCACTCGAGAAAACACCCAGGCTTCAGTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR CCA 72 bp AATAAAGAATCCAAACCACACAAAGGCTATCAGGCTTaGAACAAAGGCCAGACACTTGACATCAAGACTGGC +
Preference number: 3 (lower is better)
Translates to: NKESKPHKGYQA*NKGQTLDIKTG
Trigger: GCCAGTCTTGATGTCAAGTGTCTGGCCTTTGTTCCAAGCCTGATAGCCTTTGTGTGGTTTGGATTCTTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR CCA 72 bp CCGAGTCTAGTTCGTAGGTGTACTTTTAGAAGTCGTTaGGTCTTGATCAGCTTCTGTTGCACTAGTAGATTC +
Preference number: 3 (lower is better)
Translates to: PSLVRRCTFRSR*VLISFCCTSRF
Trigger: GAATCTACTAGTGCAACAGAAGCTGATCAAGACCCAACGACTTCTAAAAGTACACCTACGAACTAGACTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR CCA 72 bp ACCAGGGAGATTTACATCAACATCTCCCATGAAATGTaGGAATTCCCAGTCCTGCATCACAATAAGAAGGTC +
Preference number: 3 (lower is better)
Translates to: TREIYINISHEM*EFPVLHHNKKV
Trigger: GACCTTCTTATTGTGATGCAGGACTGGGAATTCCCACATTTCATGGGAGATGTTGATGTAAATCTCCCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546868.5
3UTR-3UTR CAA 90 bp CCAAACCACACAAAGGCTATCAGGCTTGGAACAAAGGCCAGACACTTGACATCAACTCAAGGTTGCTTTTaGTGTTATCTCCAAGTCTAT +
Preference number: 3 (lower is better)
Translates to: PNHTKAIRLGTKARHLTSTQGCF*CYLQVY
Trigger: ATAGACTTGGAGATAACACAAAAAGCAACCTTGAGT...TGATGTCAAGTGTCTGGCCTTTGTTCCAAGCCTGATAGCCTTTGTGTGGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp GAACATGTCTCCCTCAACATATGTTTTATTAGTCCGAGGGTTAGTGTGATTGGATTCTCTGCAGTCCAGTaGTCAAAGTCACCAACTCTG +
Preference number: 3 (lower is better)
Translates to: EHVSLNICFISPRVSVIGFSAVQ*SKSPTL
Trigger: CAGAGTTGGTGACTTTGACAACTGGACTGCAGAGAA...TCCAATCACACTAACCCTCGGACTAATAAAACATATGTTGAGGGAGACATGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp TCTCATATGATGAAAACTTCAGTTCCTTGGTTGTCTGGGACTTTGTGTAAATGCACAAAGGCCAGACACTaGACATCAAGACTGGCTCCT +
Preference number: 3 (lower is better)
Translates to: SHMMKTSVPWLSGTLCKCTKARH*TSRLAP
Trigger: AGGAGCCAGTCTTGATGTCAAGTGTCTGGCCTTTGT...GCATTTACACAAAGTCCCAGACAACCAAGGAACTGAAGTTTTCATCATATGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp TTGAGGAGTTCCCTTGCTCAGGGTTGGCATATGTTTTTCAATTTTCACTATCCAAGAAGTCGTTGGGTCTaGATCAGCTTCTGTTGCACT +
Preference number: 3 (lower is better)
Translates to: LRSSLAQGWHMFFNFHYPRSRWV*ISFCCT
Trigger: AGTGCAACAGAAGCTGATCAAGACCCAACGACTTCT...TGGATAGTGAAAATTGAAAAACATATGCCAACCCTGAGCAAGGGAACTCCTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp AAAGTTACACTCAAGGTTGCTTTTTGTGTTATCTCCAAGTCTATCTCCGAGTCTCCTAGAAAAAGCATGTaGAGCACCGTTGTGGCATTG +
Preference number: 3 (lower is better)
Translates to: KVTLKVAFCVISKSISESPRKSM*STVVAL
Trigger: CAATGCCACAACGGTGCTCAACATGCTTTTTCTAGG...AGACTCGGAGATAGACTTGGAGATAACACAAAAAGCAACCTTGAGTGTAACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp TTGAGGAGTTCCCTTGCTCAGGGTTGGCATATGTTTTTCAATTTTCACTATCCAAAGGCACCACTATGGTaGAACATCAGATACATGGGT +
Preference number: 3 (lower is better)
Translates to: LRSSLAQGWHMFFNFHYPKAPLW*NIRYMG
Trigger: ACCCATGTATCTGATGTTCAACCATAGTGGTGCCTT...TGGATAGTGAAAATTGAAAAACATATGCCAACCCTGAGCAAGGGAACTCCTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp TCCCAGGATAGCTTGGTTCTGTTCAAATCTTTTAAACTTTCTGAGTCTTTCACTCCCCGGGCCGATATATaGCCCATATTCATGAGGTTT +
Preference number: 3 (lower is better)
Translates to: SQDSLVLFKSFKLSESFTPRADI*PIFMRF
Trigger: AAACCTCATGAATATGGGCAATATATCGGCCCGGGG...AGTGAAAGACTCAGAAAGTTTAAAAGATTTGAACAGAACCAAGCTATCCTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp ACAACCACAGACGTCAGAGTAAAAAGAACTGTCCAGAATAAAGTGATCCTAACATCTTCCAGAAAGCTCTaGCTGATTTTCCCCAGTCAG +
Preference number: 3 (lower is better)
Translates to: TTTDVRVKRTVQNKVILTSSRKL*LIFPSQ
Trigger: CTGACTGGGGAAAATCAGCAAGAGCTTTCTGGAAGA...TGTTAGGATCACTTTATTCTGGACAGTTCTTTTTACTCTGACGTCTGTGGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546868.5
3UTR GCA 72 bp ACATACGCAAAACAAGACATTAAACAAATTCTTTCATaGACGGCTTCTCTACCTGACAAGGTTCCGCTGCAT +
Preference number: 3 (lower is better)
Translates to: TYAKQDIKQILS*TASLPDKVPLH
Trigger: ATGCAGCGGAACCTTGTCAGGTAGAGAAGCCGTGCATGAAAGAATTTGTTTAATGTCTTGTTTTGCGTATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp TCTTCTACTGAAGCCTGGGTGTTTTCTCGAGTGATTCCCATGTCTTTGCTATGTAAGTTACACTCAAGGTaGCTTTTTGTGTTATCTCCA +
Preference number: 3 (lower is better)
Translates to: SSTEAWVFSRVIPMSLLCKLHSR*LFVLSP
Trigger: TGGAGATAACACAAAAAGCAACCTTGAGTGTAACTT...ACATAGCAAAGACATGGGAATCACTCGAGAAAACACCCAGGCTTCAGTAGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp TTAAAAGGTGATCACCATGTTTCTCTGCAGTCCAGTTGTCAAAGTCACCAACTCAGCACCGTTGTGGCATaGTTCATATTTTTACCTAAC +
Preference number: 3 (lower is better)
Translates to: LKGDHHVSLQSSCQSHQLSTVVA*FIFLPN
Trigger: GTTAGGTAAAAATATGAACAATGCCACAACGGTGCT...GAGTTGGTGACTTTGACAACTGGACTGCAGAGAAACATGGTGATCACCTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp ATCATCACCTCATTTCAATTACTGGTGGGAGAAAGTCACATTTCACGAGTAGTGACTTCAGTTCCTTGGTaGTCTGGGACTTTGTGTAAA +
Preference number: 3 (lower is better)
Translates to: IITSFQLLVGESHISRVVTSVPW*SGTLCK
Trigger: TTTACACAAAGTCCCAGACAACCAAGGAACTGAAGT...CACTACTCGTGAAATGTGACTTTCTCCCACCAGTAATTGAAATGAGGTGATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp ATACATGGGTCATCAGCTAATCTTCCACTATGCTGTAAAGTCAGTAATAGCTTGGAAAACTTCAGTTCCTaGGTTGTCTGGGACTTTGTG +
Preference number: 3 (lower is better)
Translates to: IHGSSANLPLCCKVSNSLENFSS*VVWDFV
Trigger: CACAAAGTCCCAGACAACCAAGGAACTGAAGTTTTC...CAAGCTATTACTGACTTTACAGCATAGTGGAAGATTAGCTGATGACCCATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp AAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTTGTCACTCAAGGTTGCTTTTaGTGTTATCTCCAAGTCTAT +
Preference number: 3 (lower is better)
Translates to: KWWDVLLSYDENFSSLVVTQGCF*CYLQVY
Trigger: ATAGACTTGGAGATAACACAAAAAGCAACCTTGAGT...GACAACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp GACCCATGTTGGGTTATGGATCTCCTATTACTGAATTTTGCATCTGTATTTATACCTAGAAAAAGCATGTaGAGCACCGTTGTGGCATTG +
Preference number: 3 (lower is better)
Translates to: DPCWVMDLLLLNFASVFIPRKSM*STVVAL
Trigger: CAATGCCACAACGGTGCTCAACATGCTTTTTCTAGG...TATAAATACAGATGCAAAATTCAGTAATAGGAGATCCATAACCCAACATGGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp TACGAATATTGTAAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTAAGGCACCACTATGGTaGAACATCAGATACATGGGT +
Preference number: 3 (lower is better)
Translates to: YEYCKWWDVLLSYDENFSKAPLW*NIRYMG
Trigger: ACCCATGTATCTGATGTTCAACCATAGTGGTGCCTT...ACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTTACAATATTCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp TTTGCAGAAAGATATACGAATATTGTAAATGGTGGGATGTGCTGCTCTCATATGGAAAACTTCAGTTCCTaGGTTGTCTGGGACTTTGTG +
Preference number: 3 (lower is better)
Translates to: FAERYTNIVNGGMCCSHMENFSS*VVWDFV
Trigger: CACAAAGTCCCAGACAACCAAGGAACTGAAGTTTTC...CATATGAGAGCAGCACATCCCACCATTTACAATATTCGTATATCTTTCTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp TCTGGTACAGTTAAAAACAGTTTAATGTCTCAAGGCACCACTATGGTTGAACATGAAAACTTCAGTTCCTaGGTTGTCTGGGACTTTGTG +
Preference number: 3 (lower is better)
Translates to: SGTVKNSLMSQGTTMVEHENFSS*VVWDFV
Trigger: CACAAAGTCCCAGACAACCAAGGAACTGAAGTTTTC...ATGTTCAACCATAGTGGTGCCTTGAGACATTAAACTGTTTTTAACTGTACCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp TCATTTCAATTACTGGTGGGAGAAAGTCACATTTCACGAGTAGTGACCCATGTTTTCCCTTGCTCAGGGTaGGCATATGTTTTTCAATTT +
Preference number: 3 (lower is better)
Translates to: SFQLLVGESHISRVVTHVFPCSG*AYVFQF
Trigger: AAATTGAAAAACATATGCCAACCCTGAGCAAGGGAA...AACATGGGTCACTACTCGTGAAATGTGACTTTCTCCCACCAGTAATTGAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp CTTTTAAACTTTCTGAGTCTTTCACTGTATATATCTTCTGCCCCGGGCCGATATCATTCCCAGGATAGCTaGGTTCTGTTCAAATCTTTT +
Preference number: 3 (lower is better)
Translates to: LLNFLSLSLYISSAPGRYHSQDS*VLFKSF
Trigger: AAAAGATTTGAACAGAACCAAGCTATCCTGGGAATG...ATATCGGCCCGGGGCAGAAGATATATACAGTGAAAGACTCAGAAAGTTTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp TCATTTCAATTACTGGTGGGAGAAAGTCACATTTCACGAGTAGTGACCCATGTTACTCAAGGTTGCTTTTaGTGTTATCTCCAAGTCTAT +
Preference number: 3 (lower is better)
Translates to: SFQLLVGESHISRVVTHVTQGCF*CYLQVY
Trigger: ATAGACTTGGAGATAACACAAAAAGCAACCTTGAGT...AACATGGGTCACTACTCGTGAAATGTGACTTTCTCCCACCAGTAATTGAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR GCA 72 bp CATCAGATACATGGGTCATCAGCTAATCTTCCACTATaGTGTAAAGTCAGTAATAGCTTGTGCAATTGTGAA +
Preference number: 3 (lower is better)
Translates to: HQIHGSSANLPL*CKVSNSLCNCE
Trigger: TTCACAATTGCACAAGCTATTACTGACTTTACAGCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp TCCCAGGATAGCTTGGTTCTGTTCAAATCTTTTAAACTTTCTGAGTCTTTCACTCATTCCCAGGATAGCTaGGTTCTGTTCAAATCTTTT +
Preference number: 3 (lower is better)
Translates to: SQDSLVLFKSFKLSESFTHSQDS*VLFKSF
Trigger: AAAAGATTTGAACAGAACCAAGCTATCCTGGGAATG...AGTGAAAGACTCAGAAAGTTTAAAAGATTTGAACAGAACCAAGCTATCCTGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR-3UTR CAA 90 bp TCATCAGCTAATCTTCCACTATGCTGTAAAGTCAGTAATAGCTTGTGCAATTGTAAGTTACACTCAAGGTaGCTTTTTGTGTTATCTCCA +
Preference number: 3 (lower is better)
Translates to: SSANLPLCCKVSNSLCNCKLHSR*LFVLSP
Trigger: TGGAGATAACACAAAAAGCAACCTTGAGTGTAACTT...ACAATTGCACAAGCTATTACTGACTTTACAGCATAGTGGAAGATTAGCTGATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
3UTR TCA 72 bp TTGTGCAATTGTGAAAAGCAATCTCTAGAGGACTGTTaGGTATACAGTAGGCACGTGTATTATAATACAAAT +
Preference number: 3 (lower is better)
Translates to: LCNCEKQSLEDC*VYSRHVYYNTN
Trigger: ATTTGTATTATAATACACGTGCCTACTGTATACTCAACAGTCCTCTAGAGATTGCTTTTCACAATTGCACAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp ATCATCACCTCATTTCAATTACTGGTGGGAGAAAGTCACATTTCACGAGTAGTGGGGGCGCGGGGCGACTaGACACGGGATTCGCGGTCG +
Preference number: 4 (lower is better)
Translates to: IITSFQLLVGESHISRVVGARGD*TRDSRS
Trigger: CGACCGCGAATCCCGTGTGCAGTCGCCCCGCGCCCC...CACTACTCGTGAAATGTGACTTTCTCCCACCAGTAATTGAAATGAGGTGATGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266534.8
ENST00000551577.5
CDS-3UTR GCA 90 bp TCTGGTACAGTTAAAAACAGTTTAATGTCTCAAGGCACCACTATGGTTGAACATGGGGCGCGGGGCGACTaGACACGGGATTCGCGGTCG +
Preference number: 4 (lower is better)
Translates to: SGTVKNSLMSQGTTMVEHGARGD*TRDSRS
Trigger: CGACCGCGAATCCCGTGTGCAGTCGCCCCGCGCCCC...ATGTTCAACCATAGTGGTGCCTTGAGACATTAAACTGTTTTTAACTGTACCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266534.8
ENST00000551577.5
CDS-3UTR TCA 90 bp GGAACAAAGGCCAGACACTTGACATCAAGACTGGCTCCTATGAACCTGCTGTGTGCTTCTGTTTGGCTATaGGAAACTGGGTCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: GTKARHLTSRLAPMNLLCASVWL*ETGSSA
Trigger: TGCGGAGGACCCAGTTTCTCATAGCCAAACAGAAGC...ACACAGCAGGTTCATAGGAGCCAGTCTTGATGTCAAGTGTCTGGCCTTTGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR CAA 72 bp ACAAAGGCTATCAGGCTTGGAACAAAGGCCAGACACTaGACATCAAGACTGGCTCCTATGAACCTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: TKAIRLGTKARH*TSRLAPMNLLC
Trigger: ACACAGCAGGTTCATAGGAGCCAGTCTTGATGTCAAGTGTCTGGCCTTTGTTCCAAGCCTGATAGCCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp CCACTATGGTTGAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCTGCTTCTGTTTGGCTATaGGAAACTGGGTCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: PLWLNIRYMGHQLIFHYAASVWL*ETGSSA
Trigger: TGCGGAGGACCCAGTTTCTCATAGCCAAACAGAAGC...AGCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTCAACCATAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp GAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCTGTAAAGTCAGTGTCCGAGGGTTAGTGTaGTTGGACCTCCATTCCCAG +
Preference number: 4 (lower is better)
Translates to: EHQIHGSSANLPLCCKVSVRGLV*LDLHSQ
Trigger: CTGGGAATGGAGGTCCAATCACACTAACCCTCGGAC...ACTGACTTTACAGCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp GTGGGAGAAAGTCACATTTCACGAGTAGTGACCCATGTTGGGTTATGGATCTCCCTAGAAAAAGCATGTTaGGCACCGTTGTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: VGESHISRVVTHVGLWISLEKAC*APLWHC
Trigger: ACAATGCCACAACGGTGCTCAACATGCTTTTTCTAG...GGAGATCCATAACCCAACATGGGTCACTACTCGTGAAATGTGACTTTCTCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp GTGGGAGAAAGTCACATTTCACGAGTAGTGACCCATGTTGGGTTATGGATCTCCATCTCCCATGAAATGTaGGAATTCCCAGTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: VGESHISRVVTHVGLWISISHEM*EFPVLH
Trigger: ATGCAGGACTGGGAATTCCCACATTTCATGGGAGAT...GGAGATCCATAACCCAACATGGGTCACTACTCGTGAAATGTGACTTTCTCCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266534.8
ENST00000546868.5
3UTR CAA 72 bp GAAACTTCATCACTGGGCAAAAATCCCCGATTCAGCTaGTCCCAGCTGATCCAGTCCGTTGTAATCACAAGT +
Preference number: 4 (lower is better)
Translates to: ETSSLGKNPRFS*SQLIQSVVITS
Trigger: ACTTGTGATTACAACGGACTGGATCAGCTGGGACAAGCTGAATCGGGGATTTTTGCCCAGTGATGAAGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546868.5
CDS-3UTR TCA 90 bp TTTGAGGAGTTCCCTTGCTCAGGGTTGGCATATGTTTTTCAATTTTCACTATCCATCTTGAACTGCATGTaGGGGGTGTGCAAACCAGGG +
Preference number: 4 (lower is better)
Translates to: FEEFPCSGLAYVFQFSLSILNCM*GVCKPG
Trigger: CCCTGGTTTGCACACCCCTCACATGCAGTTCAAGAT...GGATAGTGAAAATTGAAAAACATATGCCAACCCTGAGCAAGGGAACTCCTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266534.8
ENST00000546868.5
CDS-3UTR TCA 90 bp GAACATGTCTCCCTCAACATATGTTTTATTAGTCCGAGGGTTAGTGTGATTGGAATCTTGAACTGCATGTaGGGGGTGTGCAAACCAGGG +
Preference number: 4 (lower is better)
Translates to: EHVSLNICFISPRVSVIGILNCM*GVCKPG
Trigger: CCCTGGTTTGCACACCCCTCACATGCAGTTCAAGAT...TCCAATCACACTAACCCTCGGACTAATAAAACATATGTTGAGGGAGACATGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546868.5
CDS-3UTR GCA 90 bp CCACTATGGTTGAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCTAGTAAGCCACAATCATaGGAGACCAGGGATGCTGGA +
Preference number: 4 (lower is better)
Translates to: PLWLNIRYMGHQLIFHYASKPQS*ETRDAG
Trigger: TCCAGCATCCCTGGTCTCGCATGATTGTGGCTTACT...AGCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTCAACCATAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp GGAACAAAGGCCAGACACTTGACATCAAGACTGGCTCCTATGAACCTGCTGTGTAATGGTGGGATGTGCTaGTCTCATATGATGAAAACT +
Preference number: 4 (lower is better)
Translates to: GTKARHLTSRLAPMNLLCNGGMC*SHMMKT
Trigger: AGTTTTCATCATATGAGAGCAGCACATCCCACCATT...ACACAGCAGGTTCATAGGAGCCAGTCTTGATGTCAAGTGTCTGGCCTTTGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp CCAAACCACACAAAGGCTATCAGGCTTGGAACAAAGGCCAGACACTTGACATCATGGAAACTTCATCACTaGGCAAAAATCCCCGATTCA +
Preference number: 4 (lower is better)
Translates to: PNHTKAIRLGTKARHLTSWKLHH*AKIPDS
Trigger: TGAATCGGGGATTTTTGCCCAGTGATGAAGTTTCCA...TGATGTCAAGTGTCTGGCCTTTGTTCCAAGCCTGATAGCCTTTGTGTGGTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp ACCACTATGGTTGAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCCCAGAAAGCTCTTGCTaGTTTTCCCCAGTCAGGATA +
Preference number: 4 (lower is better)
Translates to: TTMVEHQIHGSSANLPLCPESSC*FSPVRI
Trigger: TATCCTGACTGGGGAAAATCAGCAAGAGCTTTCTGG...GCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTCAACCATAGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp AAAACAATGAATCCTAGAAAAAGCATGTTGAGCACCGTTGTGGCATTGTTCATAGTCCGAGGGTTAGTGTaGTTGGACCTCCATTCCCAG +
Preference number: 4 (lower is better)
Translates to: KTMNPRKSMLSTVVALFIVRGLV*LDLHSQ
Trigger: CTGGGAATGGAGGTCCAATCACACTAACCCTCGGAC...TATGAACAATGCCACAACGGTGCTCAACATGCTTTTTCTAGGATTCATTGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp AAAGTTACACTCAAGGTTGCTTTTTGTGTTATCTCCAAGTCTATCTCCGAGTCTCAAGGGGTCTTCTACTaGAGCCTGGGTGTTTTCTCG +
Preference number: 4 (lower is better)
Translates to: KVTLKVAFCVISKSISESQGVFY*SLGVFS
Trigger: CGAGAAAACACCCAGGCTTCAGTAGAAGACCCCTTG...AGACTCGGAGATAGACTTGGAGATAACACAAAAAGCAACCTTGAGTGTAACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp TCTTCTACTGAAGCCTGGGTGTTTTCTCGAGTGATTCCCATGTCTTTGCTATGTAGATTCGTTCAACTGTaGGCTCAAGTTTTCCGAGGT +
Preference number: 4 (lower is better)
Translates to: SSTEAWVFSRVIPMSLLCRFVQL*AQVFRG
Trigger: ACCTCGGAAAACTTGAGCTCACAGTTGAACGAATCT...ACATAGCAAAGACATGGGAATCACTCGAGAAAACACCCAGGCTTCAGTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp CTTGTAGACGATCTCATTGAAGTCAGACCTGATGCAAACCAAAGAAGGGTCATTGAAGTCGTTGGGTCTTaGTCAGCTTCTGTTGCACTA +
Preference number: 4 (lower is better)
Translates to: LVDDLIEVRPDANQRRVIEVVGS*SASVAL
Trigger: TAGTGCAACAGAAGCTGATCAAGACCCAACGACTTC...AATGACCCTTCTTTGGTTTGCATCAGGTCTGACTTCAATGAGATCGTCTACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp ACCACTATGGTTGAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCTCTCTAGAGGACTGTTaGGTATACAGTAGGCACGTG +
Preference number: 4 (lower is better)
Translates to: TTMVEHQIHGSSANLPLCSLEDC*VYSRHV
Trigger: CACGTGCCTACTGTATACTCAACAGTCCTCTAGAGA...GCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTCAACCATAGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp TGGGAATTCCCAGTCCTGCATCACAATAAGAAGGTCAAAGACCAAGATAAAAGAAGTAAGCCACAATCATaGGAGACCAGGGATGCTGGA +
Preference number: 4 (lower is better)
Translates to: WEFPVLHHNKKVKDQDKRSKPQS*ETRDAG
Trigger: TCCAGCATCCCTGGTCTCGCATGATTGTGGCTTACT...TCTTTTATCTTGGTCTTTGACCTTCTTATTGTGATGCAGGACTGGGAATTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546868.5
CDS-3UTR GCA 90 bp CCAGGGAGATTTACATCAACATCTCCCATGAAATGTGGGAATTCCCAGTCCTGCAATGGTGGGATGTGCTaGTCTCATATGATGAAAACT +
Preference number: 4 (lower is better)
Translates to: PGRFTSTSPMKCGNSQSCNGGMC*SHMMKT
Trigger: AGTTTTCATCATATGAGAGCAGCACATCCCACCATT...GCAGGACTGGGAATTCCCACATTTCATGGGAGATGTTGATGTAAATCTCCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546868.5
CDS-3UTR GCA 90 bp GTGGGAGAAAGTCACATTTCACGAGTAGTGACCCATGTTGGGTTATGGATCTCCGTAAATGGTGGGATGTaGTGCTCTCATATGATGAAA +
Preference number: 4 (lower is better)
Translates to: VGESHISRVVTHVGLWISVNGGM*CSHMMK
Trigger: TTTCATCATATGAGAGCAGCACATCCCACCATTTAC...GGAGATCCATAACCCAACATGGGTCACTACTCGTGAAATGTGACTTTCTCCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp TTTCACTGTATATATCTTCTGCCCCGGGCCGATATATTGCCCATATTCATGAGGTTTGAGGAGTTCCCTTaGTCAGGGTTGGCATATGTT +
Preference number: 4 (lower is better)
Translates to: FHCIYLLPRADILPIFMRFEEFP*SGLAYV
Trigger: AACATATGCCAACCCTGAGCAAGGGAACTCCTCAAA...CCTCATGAATATGGGCAATATATCGGCCCGGGGCAGAAGATATATACAGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp TCTGTTGCACTAGTAGATTCGTTCAACTGTGAGCTCAAGTTTTCCGAGGTTAGGAAGCAAGGAATGCTCTaGAAACTTCATCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: SVALVDSFNCELKFSEVRKQGML*KLHHWA
Trigger: TGCCCAGTGATGAAGTTTCCAGAGCATTCCTTGCTT...CCTAACCTCGGAAAACTTGAGCTCACAGTTGAACGAATCTACTAGTGCAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp GTGGGAGAAAGTCACATTTCACGAGTAGTGACCCATGTTGGGTTATGGATCTCCTACGAATATTGTAAATaGTGGGATGTGCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: VGESHISRVVTHVGLWISYEYCK*WDVLLS
Trigger: TGAGAGCAGCACATCCCACCATTTACAATATTCGTA...GGAGATCCATAACCCAACATGGGTCACTACTCGTGAAATGTGACTTTCTCCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp TCCCAGGATAGCTTGGTTCTGTTCAAATCTTTTAAACTTTCTGAGTCTTTCACTGCTTCTGTTTGGCTATaGGAAACTGGGTCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: SQDSLVLFKSFKLSESFTASVWL*ETGSSA
Trigger: TGCGGAGGACCCAGTTTCTCATAGCCAAACAGAAGC...AGTGAAAGACTCAGAAAGTTTAAAAGATTTGAACAGAACCAAGCTATCCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp AAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTTGTCCAGCTATTAGTCCTGTaGGAATGGCAAGTAGCCATA +
Preference number: 4 (lower is better)
Translates to: KWWDVLLSYDENFSSLVVQLLVL*EWQVAI
Trigger: TATGGCTACTTGCCATTCTCACAGGACTAATAGCTG...GACAACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp TCATTTCAATTACTGGTGGGAGAAAGTCACATTTCACGAGTAGTGACCCATGTTCCAGAAAGCTCTTGCTaGTTTTCCCCAGTCAGGATA +
Preference number: 4 (lower is better)
Translates to: SFQLLVGESHISRVVTHVPESSC*FSPVRI
Trigger: TATCCTGACTGGGGAAAATCAGCAAGAGCTTTCTGG...AACATGGGTCACTACTCGTGAAATGTGACTTTCTCCCACCAGTAATTGAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp TGGGAATTCCCAGTCCTGCATCACAATAAGAAGGTCAAAGACCAAGATAAAAGACCAGAAAGCTCTTGCTaGTTTTCCCCAGTCAGGATA +
Preference number: 4 (lower is better)
Translates to: WEFPVLHHNKKVKDQDKRPESSC*FSPVRI
Trigger: TATCCTGACTGGGGAAAATCAGCAAGAGCTTTCTGG...TCTTTTATCTTGGTCTTTGACCTTCTTATTGTGATGCAGGACTGGGAATTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546868.5
CDS-3UTR TCA 90 bp AATCCTAGAAAAAGCATGTTGAGCACCGTTGTGGCATTGTTCATATTTTTACCTCAAGGGGTCTTCTACTaGAGCCTGGGTGTTTTCTCG +
Preference number: 4 (lower is better)
Translates to: NPRKSMLSTVVALFIFLPQGVFY*SLGVFS
Trigger: CGAGAAAACACCCAGGCTTCAGTAGAAGACCCCTTG...AGGTAAAAATATGAACAATGCCACAACGGTGCTCAACATGCTTTTTCTAGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp GTAAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTTGAGATTCGTTCAACTGTaGGCTCAAGTTTTCCGAGGT +
Preference number: 4 (lower is better)
Translates to: VNGGMCCSHMMKTSVPWLRFVQL*AQVFRG
Trigger: ACCTCGGAAAACTTGAGCTCACAGTTGAACGAATCT...CAACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp CAAGACATTAAACAAATTCTTTCATGCACGGCTTCTCTACCTGACAAGGTTCCGCTAGAAAAAGCATGTTaGGCACCGTTGTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: QDIKQILSCTASLPDKVPLEKAC*APLWHC
Trigger: ACAATGCCACAACGGTGCTCAACATGCTTTTTCTAG...CGGAACCTTGTCAGGTAGAGAAGCCGTGCATGAAAGAATTTGTTTAATGTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp AGTCTTTCACTGTATATATCTTCTGCCCCGGGCCGATATATTGCCCATATTCATCTAGAAAAAGCATGTTaGGCACCGTTGTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: SLSLYISSAPGRYIAHIHLEKAC*APLWHC
Trigger: ACAATGCCACAACGGTGCTCAACATGCTTTTTCTAG...ATGAATATGGGCAATATATCGGCCCGGGGCAGAAGATATATACAGTGAAAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp TCATTTCAATTACTGGTGGGAGAAAGTCACATTTCACGAGTAGTGACCCATGTTTCTCTAGAGGACTGTTaGGTATACAGTAGGCACGTG +
Preference number: 4 (lower is better)
Translates to: SFQLLVGESHISRVVTHVSLEDC*VYSRHV
Trigger: CACGTGCCTACTGTATACTCAACAGTCCTCTAGAGA...AACATGGGTCACTACTCGTGAAATGTGACTTTCTCCCACCAGTAATTGAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp TCATTTCAATTACTGGTGGGAGAAAGTCACATTTCACGAGTAGTGACCCATGTTAGGCACCACTATGGTTaGACATCAGATACATGGGTC +
Preference number: 4 (lower is better)
Translates to: SFQLLVGESHISRVVTHVRHHYG*TSDTWV
Trigger: GACCCATGTATCTGATGTTCAACCATAGTGGTGCCT...AACATGGGTCACTACTCGTGAAATGTGACTTTCTCCCACCAGTAATTGAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp GTGTTATCTCCAAGTCTATCTCCGAGTCTAGTTCGTAGGTGTACTTTTAGAAGTAGGCACCACTATGGTTaGACATCAGATACATGGGTC +
Preference number: 4 (lower is better)
Translates to: VLSPSLSPSLVRRCTFRSRHHYG*TSDTWV
Trigger: GACCCATGTATCTGATGTTCAACCATAGTGGTGCCT...ACTTCTAAAAGTACACCTACGAACTAGACTCGGAGATAGACTTGGAGATAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp CTTTCTGAGTCTTTCACTGTATATATCTTCTGCCCCGGGCCGATATATTGCCCATACAAAACGCCCATGTaGAATAGGTTAGGTAACTGT +
Preference number: 4 (lower is better)
Translates to: LSESFTVYIFCPGPIYCPYKTPM*NRLGNC
Trigger: ACAGTTACCTAACCTATTTCACATGGGCGTTTTGTA...TGGGCAATATATCGGCCCGGGGCAGAAGATATATACAGTGAAAGACTCAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp TCTGTTGCACTAGTAGATTCGTTCAACTGTGAGCTCAAGTTTTCCGAGGTTAGGCTTTGTTCCCAAAGGTaGAGGGCAGGATTTTTAATC +
Preference number: 4 (lower is better)
Translates to: SVALVDSFNCELKFSEVRLCSQR*RAGFLI
Trigger: GATTAAAAATCCTGCCCTTCACCTTTGGGAACAAAG...CCTAACCTCGGAAAACTTGAGCTCACAGTTGAACGAATCTACTAGTGCAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp TCTTCTACTGAAGCCTGGGTGTTTTCTCGAGTGATTCCCATGTCTTTGCTATGTCTTTGTTCCCAAAGGTaGAGGGCAGGATTTTTAATC +
Preference number: 4 (lower is better)
Translates to: SSTEAWVFSRVIPMSLLCLCSQR*RAGFLI
Trigger: GATTAAAAATCCTGCCCTTCACCTTTGGGAACAAAG...ACATAGCAAAGACATGGGAATCACTCGAGAAAACACCCAGGCTTCAGTAGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp TCTCATATGATGAAAACTTCAGTTCCTTGGTTGTCTGGGACTTTGTGTAAATGCAGTAAGCCACAATCATaGGAGACCAGGGATGCTGGA +
Preference number: 4 (lower is better)
Translates to: SHMMKTSVPWLSGTLCKCSKPQS*ETRDAG
Trigger: TCCAGCATCCCTGGTCTCGCATGATTGTGGCTTACT...GCATTTACACAAAGTCCCAGACAACCAAGGAACTGAAGTTTTCATCATATGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp CCACTATGGTTGAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCTGGGAATTCCCAGTCCTaGATCACAATAAGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: PLWLNIRYMGHQLIFHYAGNSQS*ITIRRS
Trigger: TGACCTTCTTATTGTGATGCAGGACTGGGAATTCCC...AGCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTCAACCATAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266534.8
ENST00000546868.5
CDS-3UTR GCA 90 bp CCACTATGGTTGAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCTACTGTATATATCTTCTaGCCCGGGCCGATATATTGC +
Preference number: 4 (lower is better)
Translates to: PLWLNIRYMGHQLIFHYATVYIF*PGPIYC
Trigger: GCAATATATCGGCCCGGGGCAGAAGATATATACAGT...AGCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTCAACCATAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp GTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTTGTCTGGGACTTTGTGATCACCATGTTTCTCTaGAGTCCAGTTGTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: VLLSYDENFSSLVVWDFVITMFL*SPVVKV
Trigger: GACTTTGACAACTGGACTGCAGAGAAACATGGTGAT...CACAAAGTCCCAGACAACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp GTAAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTTGTTTGAGGAGTTCCCTTaGTCAGGGTTGGCATATGTT +
Preference number: 4 (lower is better)
Translates to: VNGGMCCSHMMKTSVPWLFEEFP*SGLAYV
Trigger: AACATATGCCAACCCTGAGCAAGGGAACTCCTCAAA...CAACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp ACCACTATGGTTGAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCGAAAGAGAATTGTGCTaGAGAACATTGTCATCCACG +
Preference number: 4 (lower is better)
Translates to: TTMVEHQIHGSSANLPLCERELC*RTLSST
Trigger: CGTGGATGACAATGTTCTTCAGCACAATTCTCTTTC...GCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTCAACCATAGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp TCATTTCAATTACTGGTGGGAGAAAGTCACATTTCACGAGTAGTGACCCATGTTGGGTGTTTTCTCGAGTaGTTCCCATGTCTTTGCTAT +
Preference number: 4 (lower is better)
Translates to: SFQLLVGESHISRVVTHVGCFLE*FPCLCY
Trigger: ATAGCAAAGACATGGGAATCACTCGAGAAAACACCC...AACATGGGTCACTACTCGTGAAATGTGACTTTCTCCCACCAGTAATTGAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp AACAAGACATTAAACAAATTCTTTCATGCACGGCTTCTCTACCTGACAAGGTTCAGGCACCACTATGGTTaGACATCAGATACATGGGTC +
Preference number: 4 (lower is better)
Translates to: NKTLNKFFHARLLYLTRFRHHYG*TSDTWV
Trigger: GACCCATGTATCTGATGTTCAACCATAGTGGTGCCT...GAACCTTGTCAGGTAGAGAAGCCGTGCATGAAAGAATTTGTTTAATGTCTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp TCTGTTGCACTAGTAGATTCGTTCAACTGTGAGCTCAAGTTTTCCGAGGTTAGGCCAAGAGATACTTCCTaGGTCACATTTAGCTATTTC +
Preference number: 4 (lower is better)
Translates to: SVALVDSFNCELKFSEVRPRDTS*VTFSYF
Trigger: GAAATAGCTAAATGTGACTCAGGAAGTATCTCTTGG...CCTAACCTCGGAAAACTTGAGCTCACAGTTGAACGAATCTACTAGTGCAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp ACCACTATGGTTGAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCCTTTGTTCCCAAAGGTaGAGGGCAGGATTTTTAATC +
Preference number: 4 (lower is better)
Translates to: TTMVEHQIHGSSANLPLCLCSQR*RAGFLI
Trigger: GATTAAAAATCCTGCCCTTCACCTTTGGGAACAAAG...GCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTCAACCATAGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp TTGAGGAGTTCCCTTGCTCAGGGTTGGCATATGTTTTTCAATTTTCACTATCCAGGGAATTCCCAGTCCTaGATCACAATAAGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LRSSLAQGWHMFFNFHYPGNSQS*ITIRRS
Trigger: TGACCTTCTTATTGTGATGCAGGACTGGGAATTCCC...TGGATAGTGAAAATTGAAAAACATATGCCAACCCTGAGCAAGGGAACTCCTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266534.8
ENST00000546868.5
CDS-3UTR GCA 90 bp TTTGAGGAGTTCCCTTGCTCAGGGTTGGCATATGTTTTTCAATTTTCACTATCCTTTGAGGAGTTCCCTTaGTCAGGGTTGGCATATGTT +
Preference number: 4 (lower is better)
Translates to: FEEFPCSGLAYVFQFSLSFEEFP*SGLAYV
Trigger: AACATATGCCAACCCTGAGCAAGGGAACTCCTCAAA...GGATAGTGAAAATTGAAAAACATATGCCAACCCTGAGCAAGGGAACTCCTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp TTAAAAGGTGATCACCATGTTTCTCTGCAGTCCAGTTGTCAAAGTCACCAACTCTGGAAACTTCATCACTaGGCAAAAATCCCCGATTCA +
Preference number: 4 (lower is better)
Translates to: LKGDHHVSLQSSCQSHQLWKLHH*AKIPDS
Trigger: TGAATCGGGGATTTTTGCCCAGTGATGAAGTTTCCA...GAGTTGGTGACTTTGACAACTGGACTGCAGAGAAACATGGTGATCACCTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp GAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCTGTAAAGTCAGTAAGCAAGGAATGCTCTaGAAACTTCATCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: EHQIHGSSANLPLCCKVSKQGML*KLHHWA
Trigger: TGCCCAGTGATGAAGTTTCCAGAGCATTCCTTGCTT...ACTGACTTTACAGCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp ATCATCACCTCATTTCAATTACTGGTGGGAGAAAGTCACATTTCACGAGTAGTGAAAGGCTATCAGGCTTaGAACAAAGGCCAGACACTT +
Preference number: 4 (lower is better)
Translates to: IITSFQLLVGESHISRVVKGYQA*NKGQTL
Trigger: AAGTGTCTGGCCTTTGTTCCAAGCCTGATAGCCTTT...CACTACTCGTGAAATGTGACTTTCTCCCACCAGTAATTGAAATGAGGTGATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp TTAAAAGGTGATCACCATGTTTCTCTGCAGTCCAGTTGTCAAAGTCACCAACTCTCTTCTACTGAAGCCTaGGTGTTTTCTCGAGTGATT +
Preference number: 4 (lower is better)
Translates to: LKGDHHVSLQSSCQSHQLSSTEA*VFSRVI
Trigger: AATCACTCGAGAAAACACCCAGGCTTCAGTAGAAGA...GAGTTGGTGACTTTGACAACTGGACTGCAGAGAAACATGGTGATCACCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp AGACTTGTAGACGATCTCATTGAAGTCAGACCTGATGCAAACCAAAGAAGGGTCTACGAATATTGTAAATaGTGGGATGTGCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: RLVDDLIEVRPDANQRRVYEYCK*WDVLLS
Trigger: TGAGAGCAGCACATCCCACCATTTACAATATTCGTA...GACCCTTCTTTGGTTTGCATCAGGTCTGACTTCAATGAGATCGTCTACAAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
3UTR CAA 72 bp CTAGTTCGTAGGTGTACTTTTAGAAGTCGTTGGGTCTaGATCAGCTTCTGTTGCACTAGTAGATTCGTTCAA +
Preference number: 4 (lower is better)
Translates to: LVRRCTFRSRWV*ISFCCTSRFVQ
Trigger: TTGAACGAATCTACTAGTGCAACAGAAGCTGATCAAGACCCAACGACTTCTAAAAGTACACCTACGAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp TTGAGGAGTTCCCTTGCTCAGGGTTGGCATATGTTTTTCAATTTTCACTATCCAGTCATCCACGACCCATaGTCTTCTCGAAACATTTTT +
Preference number: 4 (lower is better)
Translates to: LRSSLAQGWHMFFNFHYPVIHDP*SSRNIF
Trigger: AAAAATGTTTCGAGAAGATCATGGGTCGTGGATGAC...TGGATAGTGAAAATTGAAAAACATATGCCAACCCTGAGCAAGGGAACTCCTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp TCATTTCAATTACTGGTGGGAGAAAGTCACATTTCACGAGTAGTGACCCATGTTGAAAGAGAATTGTGCTaGAGAACATTGTCATCCACG +
Preference number: 4 (lower is better)
Translates to: SFQLLVGESHISRVVTHVERELC*RTLSST
Trigger: CGTGGATGACAATGTTCTTCAGCACAATTCTCTTTC...AACATGGGTCACTACTCGTGAAATGTGACTTTCTCCCACCAGTAATTGAAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp AAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTTGTCCTGCAGCTAATTTCATaGAACTTTCATTTCGGATGC +
Preference number: 4 (lower is better)
Translates to: KWWDVLLSYDENFSSLVVLQLIS*NFHFGC
Trigger: GCATCCGAAATGAAAGTTTCATGAAATTAGCTGCAG...GACAACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266534.8
ENST00000551577.5
CDS-3UTR TCA 90 bp AGACTTGTAGACGATCTCATTGAAGTCAGACCTGATGCAAACCAAAGAAGGGTCTACGATATTCCTCCTTaGAGATTTTCTGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: RLVDDLIEVRPDANQRRVYDIPP*RFSGRK
Trigger: CTTTCTTCCAGAAAATCTTCAAGGAGGAATATCGTA...GACCCTTCTTTGGTTTGCATCAGGTCTGACTTCAATGAGATCGTCTACAAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546868.5
CDS-3UTR TCA 90 bp TCTCATATGATGAAAACTTCAGTTCCTTGGTTGTCTGGGACTTTGTGTAAATGCGGGTGTTTTCTCGAGTaGTTCCCATGTCTTTGCTAT +
Preference number: 4 (lower is better)
Translates to: SHMMKTSVPWLSGTLCKCGCFLE*FPCLCY
Trigger: ATAGCAAAGACATGGGAATCACTCGAGAAAACACCC...GCATTTACACAAAGTCCCAGACAACCAAGGAACTGAAGTTTTCATCATATGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp CTAATCTTCCACTATGCTGTAAAGTCAGTAATAGCTTGTGCAATTGTGAAAAGCGAAGTCGTTGGGTCTTaGTCAGCTTCTGTTGCACTA +
Preference number: 4 (lower is better)
Translates to: LIFHYAVKSVIACAIVKSEVVGS*SASVAL
Trigger: TAGTGCAACAGAAGCTGATCAAGACCCAACGACTTC...GCTTTTCACAATTGCACAAGCTATTACTGACTTTACAGCATAGTGGAAGATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp TCATCAGCTAATCTTCCACTATGCTGTAAAGTCAGTAATAGCTTGTGCAATTGTTCTCTAGAGGACTGTTaGGTATACAGTAGGCACGTG +
Preference number: 4 (lower is better)
Translates to: SSANLPLCCKVSNSLCNCSLEDC*VYSRHV
Trigger: CACGTGCCTACTGTATACTCAACAGTCCTCTAGAGA...ACAATTGCACAAGCTATTACTGACTTTACAGCATAGTGGAAGATTAGCTGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp TGGGAATTCCCAGTCCTGCATCACAATAAGAAGGTCAAAGACCAAGATAAAAGACACCAACTCTGCTGCTaGATAAGAAACCAAGAGATA +
Preference number: 4 (lower is better)
Translates to: WEFPVLHHNKKVKDQDKRHQLCC*IRNQEI
Trigger: TATCTCTTGGTTTCTTATTCAGCAGCAGAGTTGGTG...TCTTTTATCTTGGTCTTTGACCTTCTTATTGTGATGCAGGACTGGGAATTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546868.5
CDS-3UTR GCA 90 bp GTGGGAAGACTTGTAGACGATCTCATTGAAGTCAGACCTGATGCAAACCAAAGAAAAAGAAGCAAGGAATaGTCTGGAAACTTCATCACT +
Preference number: 4 (lower is better)
Translates to: VGRLVDDLIEVRPDANQRKRSKE*SGNFIT
Trigger: AGTGATGAAGTTTCCAGAGCATTCCTTGCTTCTTTT...TCTTTGGTTTGCATCAGGTCTGACTTCAATGAGATCGTCTACAAGTCTTCCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp ATAAAGAATCCAAACCACACAAAGGCTATCAGGCTTGGAACAAAGGCCAGACACTTGATCAGCTTCTGTTaGACTAGTAGATTCGTTCAA +
Preference number: 4 (lower is better)
Translates to: IKNPNHTKAIRLGTKARHLISFC*TSRFVQ
Trigger: TTGAACGAATCTACTAGTGCAACAGAAGCTGATCAA...GTGTCTGGCCTTTGTTCCAAGCCTGATAGCCTTTGTGTGGTTTGGATTCTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp GAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCTGTAAAGTCAGTATCACCATGTTTCTCTaGAGTCCAGTTGTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: EHQIHGSSANLPLCCKVSITMFL*SPVVKV
Trigger: GACTTTGACAACTGGACTGCAGAGAAACATGGTGAT...ACTGACTTTACAGCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp ACCACTATGGTTGAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCAATGGTGGGATGTGCTaGTCTCATATGATGAAAACT +
Preference number: 4 (lower is better)
Translates to: TTMVEHQIHGSSANLPLCNGGMC*SHMMKT
Trigger: AGTTTTCATCATATGAGAGCAGCACATCCCACCATT...GCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTCAACCATAGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp GTAAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTTGGTAAATGGTGGGATGTaGTGCTCTCATATGATGAAA +
Preference number: 4 (lower is better)
Translates to: VNGGMCCSHMMKTSVPWLVNGGM*CSHMMK
Trigger: TTTCATCATATGAGAGCAGCACATCCCACCATTTAC...CAACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp TTTGAGGAGTTCCCTTGCTCAGGGTTGGCATATGTTTTTCAATTTTCACTATCCTGGAAACTTCATCACTaGGCAAAAATCCCCGATTCA +
Preference number: 4 (lower is better)
Translates to: FEEFPCSGLAYVFQFSLSWKLHH*AKIPDS
Trigger: TGAATCGGGGATTTTTGCCCAGTGATGAAGTTTCCA...GGATAGTGAAAATTGAAAAACATATGCCAACCCTGAGCAAGGGAACTCCTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp TTACACTCAAGGTTGCTTTTTGTGTTATCTCCAAGTCTATCTCCGAGTCTAGTTATCTCCCATGAAATGTaGGAATTCCCAGTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: LHSRLLFVLSPSLSPSLVISHEM*EFPVLH
Trigger: ATGCAGGACTGGGAATTCCCACATTTCATGGGAGAT...AACTAGACTCGGAGATAGACTTGGAGATAACACAAAAAGCAACCTTGAGTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546868.5
CDS-3UTR CCA 90 bp TTACACTCAAGGTTGCTTTTTGTGTTATCTCCAAGTCTATCTCCGAGTCTAGTTAAAGGCTATCAGGCTTaGAACAAAGGCCAGACACTT +
Preference number: 4 (lower is better)
Translates to: LHSRLLFVLSPSLSPSLVKGYQA*NKGQTL
Trigger: AAGTGTCTGGCCTTTGTTCCAAGCCTGATAGCCTTT...AACTAGACTCGGAGATAGACTTGGAGATAACACAAAAAGCAACCTTGAGTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp TTAAAAGGTGATCACCATGTTTCTCTGCAGTCCAGTTGTCAAAGTCACCAACTCACTTTTAGAAGTCGTTaGGTCTTGATCAGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LKGDHHVSLQSSCQSHQLTFRSR*VLISFC
Trigger: ACAGAAGCTGATCAAGACCCAACGACTTCTAAAAGT...GAGTTGGTGACTTTGACAACTGGACTGCAGAGAAACATGGTGATCACCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp GAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCTGTAAAGTCAGTCTCAAGGCACCACTATaGTTGAACATCAGATACATG +
Preference number: 4 (lower is better)
Translates to: EHQIHGSSANLPLCCKVSLKAPL*LNIRYM
Trigger: CATGTATCTGATGTTCAACCATAGTGGTGCCTTGAG...ACTGACTTTACAGCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp TTAAAAGGTGATCACCATGTTTCTCTGCAGTCCAGTTGTCAAAGTCACCAACTCAGTAGTGACCCATGTTaGGTTATGGATCTCCTATTA +
Preference number: 4 (lower is better)
Translates to: LKGDHHVSLQSSCQSHQLSSDPC*VMDLLL
Trigger: TAATAGGAGATCCATAACCCAACATGGGTCACTACT...GAGTTGGTGACTTTGACAACTGGACTGCAGAGAAACATGGTGATCACCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp TTTCACTGTATATATCTTCTGCCCCGGGCCGATATATTGCCCATATTCATGAGGTCCCTTGCTCAGGGTTaGCATATGTTTTTCAATTTT +
Preference number: 4 (lower is better)
Translates to: FHCIYLLPRADILPIFMRSLAQG*HMFFNF
Trigger: AAAATTGAAAAACATATGCCAACCCTGAGCAAGGGA...CCTCATGAATATGGGCAATATATCGGCCCGGGGCAGAAGATATATACAGTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp AATCCTAGAAAAAGCATGTTGAGCACCGTTGTGGCATTGTTCATATTTTTACCTCAGCTATTAGTCCTGTaGGAATGGCAAGTAGCCATA +
Preference number: 4 (lower is better)
Translates to: NPRKSMLSTVVALFIFLPQLLVL*EWQVAI
Trigger: TATGGCTACTTGCCATTCTCACAGGACTAATAGCTG...AGGTAAAAATATGAACAATGCCACAACGGTGCTCAACATGCTTTTTCTAGGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp ATGAACCTGCTGTGTAAGAACATGTCTCCCTCAACATATGTTTTATTAGTCCGAGTCATCCACGACCCATaGTCTTCTCGAAACATTTTT +
Preference number: 4 (lower is better)
Translates to: MNLLCKNMSPSTYVLLVRVIHDP*SSRNIF
Trigger: AAAAATGTTTCGAGAAGATCATGGGTCGTGGATGAC...TCGGACTAATAAAACATATGTTGAGGGAGACATGTTCTTACACAGCAGGTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp AACAAGACATTAAACAAATTCTTTCATGCACGGCTTCTCTACCTGACAAGGTTCGAAAGAGAATTGTGCTaGAGAACATTGTCATCCACG +
Preference number: 4 (lower is better)
Translates to: NKTLNKFFHARLLYLTRFERELC*RTLSST
Trigger: CGTGGATGACAATGTTCTTCAGCACAATTCTCTTTC...GAACCTTGTCAGGTAGAGAAGCCGTGCATGAAAGAATTTGTTTAATGTCTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp AAAACAATGAATCCTAGAAAAAGCATGTTGAGCACCGTTGTGGCATTGTTCATACATCAACATCTCCCATaGAATGTGGGAATTCCCAGT +
Preference number: 4 (lower is better)
Translates to: KTMNPRKSMLSTVVALFIHQHLP*NVGIPS
Trigger: ACTGGGAATTCCCACATTTCATGGGAGATGTTGATG...TATGAACAATGCCACAACGGTGCTCAACATGCTTTTTCTAGGATTCATTGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266534.8
ENST00000546868.5
CDS-3UTR TCA 90 bp ACCACTATGGTTGAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCTACGATATTCCTCCTTaGAGATTTTCTGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: TTMVEHQIHGSSANLPLCYDIPP*RFSGRK
Trigger: CTTTCTTCCAGAAAATCTTCAAGGAGGAATATCGTA...GCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTCAACCATAGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266534.8
ENST00000546868.5
CDS-3UTR TCA 90 bp ATCATCACCTCATTTCAATTACTGGTGGGAGAAAGTCACATTTCACGAGTAGTGCATTTGCCTGTTATGTaGATACGATATTCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: IITSFQLLVGESHISRVVHLPVM*IRYSSL
Trigger: CAAGGAGGAATATCGTATTCACATAACAGGCAAATG...CACTACTCGTGAAATGTGACTTTCTCCCACCAGTAATTGAAATGAGGTGATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266534.8
ENST00000546868.5
CDS-3UTR TCA 90 bp TTTGCAGAAAGATATACGAATATTGTAAATGGTGGGATGTGCTGCTCTCATATGGGGTGTTTTCTCGAGTaGTTCCCATGTCTTTGCTAT +
Preference number: 4 (lower is better)
Translates to: FAERYTNIVNGGMCCSHMGCFLE*FPCLCY
Trigger: ATAGCAAAGACATGGGAATCACTCGAGAAAACACCC...CATATGAGAGCAGCACATCCCACCATTTACAATATTCGTATATCTTTCTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp TTTGCAGAAAGATATACGAATATTGTAAATGGTGGGATGTGCTGCTCTCATATGAGATTCGTTCAACTGTaGGCTCAAGTTTTCCGAGGT +
Preference number: 4 (lower is better)
Translates to: FAERYTNIVNGGMCCSHMRFVQL*AQVFRG
Trigger: ACCTCGGAAAACTTGAGCTCACAGTTGAACGAATCT...CATATGAGAGCAGCACATCCCACCATTTACAATATTCGTATATCTTTCTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp GACCCATGTTGGGTTATGGATCTCCTATTACTGAATTTTGCATCTGTATTTATAGAAGTCGTTGGGTCTTaGTCAGCTTCTGTTGCACTA +
Preference number: 4 (lower is better)
Translates to: DPCWVMDLLLLNFASVFIEVVGS*SASVAL
Trigger: TAGTGCAACAGAAGCTGATCAAGACCCAACGACTTC...TATAAATACAGATGCAAAATTCAGTAATAGGAGATCCATAACCCAACATGGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp TTTGAGGAGTTCCCTTGCTCAGGGTTGGCATATGTTTTTCAATTTTCACTATCCTACAAAACGCCCATGTaGAATAGGTTAGGTAACTGT +
Preference number: 4 (lower is better)
Translates to: FEEFPCSGLAYVFQFSLSYKTPM*NRLGNC
Trigger: ACAGTTACCTAACCTATTTCACATGGGCGTTTTGTA...GGATAGTGAAAATTGAAAAACATATGCCAACCCTGAGCAAGGGAACTCCTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp TTTGCAGAAAGATATACGAATATTGTAAATGGTGGGATGTGCTGCTCTCATATGACTGTATATATCTTCTaGCCCGGGCCGATATATTGC +
Preference number: 4 (lower is better)
Translates to: FAERYTNIVNGGMCCSHMTVYIF*PGPIYC
Trigger: GCAATATATCGGCCCGGGGCAGAAGATATATACAGT...CATATGAGAGCAGCACATCCCACCATTTACAATATTCGTATATCTTTCTGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp CATTCCCAGGATAGCTTGGTTCTGTTCAAATCTTTTAAACTTTCTGAGTCTTTCACTGTATATATCTTCTaGCCCGGGCCGATATATTGC +
Preference number: 4 (lower is better)
Translates to: HSQDSLVLFKSFKLSESFTVYIF*PGPIYC
Trigger: GCAATATATCGGCCCGGGGCAGAAGATATATACAGT...GAAAGACTCAGAAAGTTTAAAAGATTTGAACAGAACCAAGCTATCCTGGGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp CAAGACATTAAACAAATTCTTTCATGCACGGCTTCTCTACCTGACAAGGTTCCGTTGATCAGCTTCTGTTaGACTAGTAGATTCGTTCAA +
Preference number: 4 (lower is better)
Translates to: QDIKQILSCTASLPDKVPLISFC*TSRFVQ
Trigger: TTGAACGAATCTACTAGTGCAACAGAAGCTGATCAA...CGGAACCTTGTCAGGTAGAGAAGCCGTGCATGAAAGAATTTGTTTAATGTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp ATACATGGGTCATCAGCTAATCTTCCACTATGCTGTAAAGTCAGTAATAGCTTGATCACCATGTTTCTCTaGAGTCCAGTTGTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: IHGSSANLPLCCKVSNSLITMFL*SPVVKV
Trigger: GACTTTGACAACTGGACTGCAGAGAAACATGGTGAT...CAAGCTATTACTGACTTTACAGCATAGTGGAAGATTAGCTGATGACCCATGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp AATCCTAGAAAAAGCATGTTGAGCACCGTTGTGGCATTGTTCATATTTTTACCTAAAGGCTATCAGGCTTaGAACAAAGGCCAGACACTT +
Preference number: 4 (lower is better)
Translates to: NPRKSMLSTVVALFIFLPKGYQA*NKGQTL
Trigger: AAGTGTCTGGCCTTTGTTCCAAGCCTGATAGCCTTT...AGGTAAAAATATGAACAATGCCACAACGGTGCTCAACATGCTTTTTCTAGGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp ATGAACCTGCTGTGTAAGAACATGTCTCCCTCAACATATGTTTTATTAGTCCGATCTTCTACTGAAGCCTaGGTGTTTTCTCGAGTGATT +
Preference number: 4 (lower is better)
Translates to: MNLLCKNMSPSTYVLLVRSSTEA*VFSRVI
Trigger: AATCACTCGAGAAAACACCCAGGCTTCAGTAGAAGA...TCGGACTAATAAAACATATGTTGAGGGAGACATGTTCTTACACAGCAGGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp AACAAGACATTAAACAAATTCTTTCATGCACGGCTTCTCTACCTGACAAGGTTCTCTTCTACTGAAGCCTaGGTGTTTTCTCGAGTGATT +
Preference number: 4 (lower is better)
Translates to: NKTLNKFFHARLLYLTRFSSTEA*VFSRVI
Trigger: AATCACTCGAGAAAACACCCAGGCTTCAGTAGAAGA...GAACCTTGTCAGGTAGAGAAGCCGTGCATGAAAGAATTTGTTTAATGTCTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp TTGAGGAGTTCCCTTGCTCAGGGTTGGCATATGTTTTTCAATTTTCACTATCCAACTTTTAGAAGTCGTTaGGTCTTGATCAGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LRSSLAQGWHMFFNFHYPTFRSR*VLISFC
Trigger: ACAGAAGCTGATCAAGACCCAACGACTTCTAAAAGT...TGGATAGTGAAAATTGAAAAACATATGCCAACCCTGAGCAAGGGAACTCCTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp ATACATGGGTCATCAGCTAATCTTCCACTATGCTGTAAAGTCAGTAATAGCTTGCTCAAGGCACCACTATaGTTGAACATCAGATACATG +
Preference number: 4 (lower is better)
Translates to: IHGSSANLPLCCKVSNSLLKAPL*LNIRYM
Trigger: CATGTATCTGATGTTCAACCATAGTGGTGCCTTGAG...CAAGCTATTACTGACTTTACAGCATAGTGGAAGATTAGCTGATGACCCATGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp ACCACTATGGTTGAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCGAATATTGTAAATGGTaGGATGTGCTGCTCTCATAT +
Preference number: 4 (lower is better)
Translates to: TTMVEHQIHGSSANLPLCEYCKW*DVLLSY
Trigger: ATATGAGAGCAGCACATCCCACCATTTACAATATTC...GCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTCAACCATAGTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp GAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCTGTAAAGTCAGTTACGAATATTGTAAATaGTGGGATGTGCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: EHQIHGSSANLPLCCKVSYEYCK*WDVLLS
Trigger: TGAGAGCAGCACATCCCACCATTTACAATATTCGTA...ACTGACTTTACAGCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp CCACTATGGTTGAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCTTCCCTTGCTCAGGGTTaGCATATGTTTTTCAATTTT +
Preference number: 4 (lower is better)
Translates to: PLWLNIRYMGHQLIFHYASLAQG*HMFFNF
Trigger: AAAATTGAAAAACATATGCCAACCCTGAGCAAGGGA...AGCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTCAACCATAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp TCTGGTACAGTTAAAAACAGTTTAATGTCTCAAGGCACCACTATGGTTGAACATGTCATCCACGACCCATaGTCTTCTCGAAACATTTTT +
Preference number: 4 (lower is better)
Translates to: SGTVKNSLMSQGTTMVEHVIHDP*SSRNIF
Trigger: AAAAATGTTTCGAGAAGATCATGGGTCGTGGATGAC...ATGTTCAACCATAGTGGTGCCTTGAGACATTAAACTGTTTTTAACTGTACCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp TACGAATATTGTAAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTCACCAACTCTGCTGCTaGATAAGAAACCAAGAGATA +
Preference number: 4 (lower is better)
Translates to: YEYCKWWDVLLSYDENFSHQLCC*IRNQEI
Trigger: TATCTCTTGGTTTCTTATTCAGCAGCAGAGTTGGTG...ACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTTACAATATTCGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp TTTGCAGAAAGATATACGAATATTGTAAATGGTGGGATGTGCTGCTCTCATATGCACCAACTCTGCTGCTaGATAAGAAACCAAGAGATA +
Preference number: 4 (lower is better)
Translates to: FAERYTNIVNGGMCCSHMHQLCC*IRNQEI
Trigger: TATCTCTTGGTTTCTTATTCAGCAGCAGAGTTGGTG...CATATGAGAGCAGCACATCCCACCATTTACAATATTCGTATATCTTTCTGCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp TTGAGGAGTTCCCTTGCTCAGGGTTGGCATATGTTTTTCAATTTTCACTATCCAAAAAGAAGCAAGGAATaGTCTGGAAACTTCATCACT +
Preference number: 4 (lower is better)
Translates to: LRSSLAQGWHMFFNFHYPKRSKE*SGNFIT
Trigger: AGTGATGAAGTTTCCAGAGCATTCCTTGCTTCTTTT...TGGATAGTGAAAATTGAAAAACATATGCCAACCCTGAGCAAGGGAACTCCTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp TTTGAGGAGTTCCCTTGCTCAGGGTTGGCATATGTTTTTCAATTTTCACTATCCAAAAGAAGCAAGGAATaGTCTGGAAACTTCATCACT +
Preference number: 4 (lower is better)
Translates to: FEEFPCSGLAYVFQFSLSKRSKE*SGNFIT
Trigger: AGTGATGAAGTTTCCAGAGCATTCCTTGCTTCTTTT...GGATAGTGAAAATTGAAAAACATATGCCAACCCTGAGCAAGGGAACTCCTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp CTTTTAAACTTTCTGAGTCTTTCACTGTATATATCTTCTGCCCCGGGCCGATATTTGATCAGCTTCTGTTaGACTAGTAGATTCGTTCAA +
Preference number: 4 (lower is better)
Translates to: LLNFLSLSLYISSAPGRYLISFC*TSRFVQ
Trigger: TTGAACGAATCTACTAGTGCAACAGAAGCTGATCAA...ATATCGGCCCGGGGCAGAAGATATATACAGTGAAAGACTCAGAAAGTTTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp CCACTATGGTTGAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCTGTCAGTAATAGCTTGTaGAATTGTGAAAAGCAATCT +
Preference number: 4 (lower is better)
Translates to: PLWLNIRYMGHQLIFHYAVSNSL*NCEKQS
Trigger: AGATTGCTTTTCACAATTGCACAAGCTATTACTGAC...AGCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTCAACCATAGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp TCCCAGGATAGCTTGGTTCTGTTCAAATCTTTTAAACTTTCTGAGTCTTTCACTCTCAAGGCACCACTATaGTTGAACATCAGATACATG +
Preference number: 4 (lower is better)
Translates to: SQDSLVLFKSFKLSESFTLKAPL*LNIRYM
Trigger: CATGTATCTGATGTTCAACCATAGTGGTGCCTTGAG...AGTGAAAGACTCAGAAAGTTTAAAAGATTTGAACAGAACCAAGCTATCCTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp AAAGTTACACTCAAGGTTGCTTTTTGTGTTATCTCCAAGTCTATCTCCGAGTCTAGTAGTGACCCATGTTaGGTTATGGATCTCCTATTA +
Preference number: 4 (lower is better)
Translates to: KVTLKVAFCVISKSISESSSDPC*VMDLLL
Trigger: TAATAGGAGATCCATAACCCAACATGGGTCACTACT...AGACTCGGAGATAGACTTGGAGATAACACAAAAAGCAACCTTGAGTGTAACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp TTTGCAGAAAGATATACGAATATTGTAAATGGTGGGATGTGCTGCTCTCATATGCATTTGCCTGTTATGTaGATACGATATTCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: FAERYTNIVNGGMCCSHMHLPVM*IRYSSL
Trigger: CAAGGAGGAATATCGTATTCACATAACAGGCAAATG...CATATGAGAGCAGCACATCCCACCATTTACAATATTCGTATATCTTTCTGCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266534.8
ENST00000546868.5
CDS-3UTR TCA 90 bp TCTGGTACAGTTAAAAACAGTTTAATGTCTCAAGGCACCACTATGGTTGAACATTACAAAACGCCCATGTaGAATAGGTTAGGTAACTGT +
Preference number: 4 (lower is better)
Translates to: SGTVKNSLMSQGTTMVEHYKTPM*NRLGNC
Trigger: ACAGTTACCTAACCTATTTCACATGGGCGTTTTGTA...ATGTTCAACCATAGTGGTGCCTTGAGACATTAAACTGTTTTTAACTGTACCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR TCA 90 bp TACGAATATTGTAAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTCCAAGAGATACTTCCTaGGTCACATTTAGCTATTTC +
Preference number: 4 (lower is better)
Translates to: YEYCKWWDVLLSYDENFSPRDTS*VTFSYF
Trigger: GAAATAGCTAAATGTGACTCAGGAAGTATCTCTTGG...ACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTTACAATATTCGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp CTTTTAAACTTTCTGAGTCTTTCACTGTATATATCTTCTGCCCCGGGCCGATATGTCAGTAATAGCTTGTaGAATTGTGAAAAGCAATCT +
Preference number: 4 (lower is better)
Translates to: LLNFLSLSLYISSAPGRYVSNSL*NCEKQS
Trigger: AGATTGCTTTTCACAATTGCACAAGCTATTACTGAC...ATATCGGCCCGGGGCAGAAGATATATACAGTGAAAGACTCAGAAAGTTTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp ATGAACCTGCTGTGTAAGAACATGTCTCCCTCAACATATGTTTTATTAGTCCGAGCTAATCTTCCACTATaGTGTAAAGTCAGTAATAGC +
Preference number: 4 (lower is better)
Translates to: MNLLCKNMSPSTYVLLVRANLPL*CKVSNS
Trigger: GCTATTACTGACTTTACAGCATAGTGGAAGATTAGC...TCGGACTAATAAAACATATGTTGAGGGAGACATGTTCTTACACAGCAGGTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp CCCAGGATAGCTTGGTTCTGTTCAAATCTTTTAAACTTTCTGAGTCTTTCACTGGCTAATCTTCCACTATaGTGTAAAGTCAGTAATAGC +
Preference number: 4 (lower is better)
Translates to: PRIAWFCSNLLNFLSLSLANLPL*CKVSNS
Trigger: GCTATTACTGACTTTACAGCATAGTGGAAGATTAGC...CAGTGAAAGACTCAGAAAGTTTAAAAGATTTGAACAGAACCAAGCTATCCTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp TTTGCAGAAAGATATACGAATATTGTAAATGGTGGGATGTGCTGCTCTCATATGGTAAATGGTGGGATGTaGTGCTCTCATATGATGAAA +
Preference number: 4 (lower is better)
Translates to: FAERYTNIVNGGMCCSHMVNGGM*CSHMMK
Trigger: TTTCATCATATGAGAGCAGCACATCCCACCATTTAC...CATATGAGAGCAGCACATCCCACCATTTACAATATTCGTATATCTTTCTGCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp TCCCAGGATAGCTTGGTTCTGTTCAAATCTTTTAAACTTTCTGAGTCTTTCACTACTTTTAGAAGTCGTTaGGTCTTGATCAGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SQDSLVLFKSFKLSESFTTFRSR*VLISFC
Trigger: ACAGAAGCTGATCAAGACCCAACGACTTCTAAAAGT...AGTGAAAGACTCAGAAAGTTTAAAAGATTTGAACAGAACCAAGCTATCCTGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp TACGAATATTGTAAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTAGTAGTGACCCATGTTaGGTTATGGATCTCCTATTA +
Preference number: 4 (lower is better)
Translates to: YEYCKWWDVLLSYDENFSSSDPC*VMDLLL
Trigger: TAATAGGAGATCCATAACCCAACATGGGTCACTACT...ACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTTACAATATTCGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp ATACATGGGTCATCAGCTAATCTTCCACTATGCTGTAAAGTCAGTAATAGCTTGTCCCTTGCTCAGGGTTaGCATATGTTTTTCAATTTT +
Preference number: 4 (lower is better)
Translates to: IHGSSANLPLCCKVSNSLSLAQG*HMFFNF
Trigger: AAAATTGAAAAACATATGCCAACCCTGAGCAAGGGA...CAAGCTATTACTGACTTTACAGCATAGTGGAAGATTAGCTGATGACCCATGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp TCATCAGCTAATCTTCCACTATGCTGTAAAGTCAGTAATAGCTTGTGCAATTGTGCTATTTCTGTTTTCTaGTCAGACATCAAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: SSANLPLCCKVSNSLCNCAISVF*SDIKCR
Trigger: TCTACACTTGATGTCTGAGCAGAAAACAGAAATAGC...ACAATTGCACAAGCTATTACTGACTTTACAGCATAGTGGAAGATTAGCTGATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp CATTCCCAGGATAGCTTGGTTCTGTTCAAATCTTTTAAACTTTCTGAGTCTTTCGCTATTTCTGTTTTCTaGTCAGACATCAAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: HSQDSLVLFKSFKLSESFAISVF*SDIKCR
Trigger: TCTACACTTGATGTCTGAGCAGAAAACAGAAATAGC...GAAAGACTCAGAAAGTTTAAAAGATTTGAACAGAACCAAGCTATCCTGGGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp TCTGGTACAGTTAAAAACAGTTTAATGTCTCAAGGCACCACTATGGTTGAACATGCTATTTCTGTTTTCTaGTCAGACATCAAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: SGTVKNSLMSQGTTMVEHAISVF*SDIKCR
Trigger: TCTACACTTGATGTCTGAGCAGAAAACAGAAATAGC...ATGTTCAACCATAGTGGTGCCTTGAGACATTAAACTGTTTTTAACTGTACCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp TTTGCAGAAAGATATACGAATATTGTAAATGGTGGGATGTGCTGCTCTCATATGGTTAAACCATTTGCCTaGATCACAATAAGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: FAERYTNIVNGGMCCSHMVKPFA*ITIRRS
Trigger: TGACCTTCTTATTGTGATGCAGGCAAATGGTTTAAC...CATATGAGAGCAGCACATCCCACCATTTACAATATTCGTATATCTTTCTGCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551577.5
CDS-3UTR CCA 90 bp AACAAGACATTAAACAAATTCTTTCATGCACGGCTTCTCTACCTGACAAGGTTCATTCCCAGGATAGCTTaGTTCTGTTCAAATCTTTTA +
Preference number: 4 (lower is better)
Translates to: NKTLNKFFHARLLYLTRFIPRIA*FCSNLL
Trigger: TAAAAGATTTGAACAGAACCAAGCTATCCTGGGAAT...GAACCTTGTCAGGTAGAGAAGCCGTGCATGAAAGAATTTGTTTAATGTCTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR GCA 90 bp GACCCATGTTGGGTTATGGATCTCCTATTACTGAATTTTGCATCTGTATTTATAGCTAATCTTCCACTATaGTGTAAAGTCAGTAATAGC +
Preference number: 4 (lower is better)
Translates to: DPCWVMDLLLLNFASVFIANLPL*CKVSNS
Trigger: GCTATTACTGACTTTACAGCATAGTGGAAGATTAGC...TATAAATACAGATGCAAAATTCAGTAATAGGAGATCCATAACCCAACATGGGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp CTAATCTTCCACTATGCTGTAAAGTCAGTAATAGCTTGTGCAATTGTGAAAAGCATTCCCAGGATAGCTTaGTTCTGTTCAAATCTTTTA +
Preference number: 4 (lower is better)
Translates to: LIFHYAVKSVIACAIVKSIPRIA*FCSNLL
Trigger: TAAAAGATTTGAACAGAACCAAGCTATCCTGGGAAT...GCTTTTCACAATTGCACAAGCTATTACTGACTTTACAGCATAGTGGAAGATTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp TCCCAGGATAGCTTGGTTCTGTTCAAATCTTTTAAACTTTCTGAGTCTTTCACTATTCCCAGGATAGCTTaGTTCTGTTCAAATCTTTTA +
Preference number: 4 (lower is better)
Translates to: SQDSLVLFKSFKLSESFTIPRIA*FCSNLL
Trigger: TAAAAGATTTGAACAGAACCAAGCTATCCTGGGAAT...AGTGAAAGACTCAGAAAGTTTAAAAGATTTGAACAGAACCAAGCTATCCTGGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CCA 90 bp GACCCATGTTGGGTTATGGATCTCCTATTACTGAATTTTGCATCTGTATTTATAGAATATTGTAAATGGTaGGATGTGCTGCTCTCATAT +
Preference number: 4 (lower is better)
Translates to: DPCWVMDLLLLNFASVFIEYCKW*DVLLSY
Trigger: ATATGAGAGCAGCACATCCCACCATTTACAATATTC...TATAAATACAGATGCAAAATTCAGTAATAGGAGATCCATAACCCAACATGGGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS GCA 90 bp CCAGTTCGTAGTTTACCCGAAGGGTCGCGCGGGGCGCGGGGCGACTaGACACGGGATTCGCGGTCGAGCACAGCCCTCGGCGCGCCGGCG +
Preference number: 5 (lower is better)
Translates to: PVRSLPEGSRGARGD*TRDSRSSTALGAPA
Trigger: CGCCGGCGCGCCGAGGGCTGTGCTCGACCGCGAATCCCGTGTGCAGTCGCCCCGCGCCCCGCGCGACCCTTCGGGTAAACTACGAACTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546387.1
ENST00000551577.5
CDS GCA 90 bp CTCGCTGGGAAGCGCGGCGAGACGGGCCGGCGGCGTCGCTGCCGCTaGTGCTGTCACGGAGCTATAAATACCGGCTCGGCCCACACCCGC +
Preference number: 5 (lower is better)
Translates to: LAGKRGETGRRRRCR*CCHGAINTGSAHTR
Trigger: GCGGGTGTGGGCCGAGCCGGTATTTATAGCTCCGTGACAGCAGCAGCGGCAGCGACGCCGCCGGCCCGTCTCGCCGCGCTTCCCAGCGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546387.1
CDS-3UTR CAA 90 bp TCATCACTGGGCAAAAATCCCCGATTCAGCTTGTCCCAGCTGATCCAGTCCGTTCCTAGAAAAAGCATGTaGAGCACCGTTGTGGCATTG +
Preference number: 5 (lower is better)
Translates to: SSLGKNPRFSLSQLIQSVPRKSM*STVVAL
Trigger: CAATGCCACAACGGTGCTCAACATGCTTTTTCTAGG...AACGGACTGGATCAGCTGGGACAAGCTGAATCGGGGATTTTTGCCCAGTGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000546868.5
CDS-3UTR CAA 90 bp CCAAACCACACAAAGGCTATCAGGCTTGGAACAAAGGCCAGACACTTGACATCAACAAAGGCCAGACACTaGACATCAAGACTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: PNHTKAIRLGTKARHLTSTKARH*TSRLAP
Trigger: AGGAGCCAGTCTTGATGTCAAGTGTCTGGCCTTTGT...TGATGTCAAGTGTCTGGCCTTTGTTCCAAGCCTGATAGCCTTTGTGTGGTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp TCTTCTACTGAAGCCTGGGTGTTTTCTCGAGTGATTCCCATGTCTTTGCTATGTCCCCGGGCCGATATATaGCCCATATTCATGAGGTTT +
Preference number: 5 (lower is better)
Translates to: SSTEAWVFSRVIPMSLLCPRADI*PIFMRF
Trigger: AAACCTCATGAATATGGGCAATATATCGGCCCGGGG...ACATAGCAAAGACATGGGAATCACTCGAGAAAACACCCAGGCTTCAGTAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp CCAAACCACACAAAGGCTATCAGGCTTGGAACAAAGGCCAGACACTTGACATCAGAAAACTTCAGTTCCTaGGTTGTCTGGGACTTTGTG +
Preference number: 5 (lower is better)
Translates to: PNHTKAIRLGTKARHLTSENFSS*VVWDFV
Trigger: CACAAAGTCCCAGACAACCAAGGAACTGAAGTTTTC...TGATGTCAAGTGTCTGGCCTTTGTTCCAAGCCTGATAGCCTTTGTGTGGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp TTTCACTGTATATATCTTCTGCCCCGGGCCGATATATTGCCCATATTCATGAGGCCGCTGCATGATTTTTaGAGGAGTTCCCTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: FHCIYLLPRADILPIFMRPLHDF*RSSLAQ
Trigger: CTGAGCAAGGGAACTCCTCAAAAAATCATGCAGCGG...CCTCATGAATATGGGCAATATATCGGCCCGGGGCAGAAGATATATACAGTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp CCACTATGGTTGAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCTCAAAGGCTATCAGGCTaGGAACAAAGGCCAGACACT +
Preference number: 5 (lower is better)
Translates to: PLWLNIRYMGHQLIFHYAQRLSG*EQRPDT
Trigger: AGTGTCTGGCCTTTGTTCCAAGCCTGATAGCCTTTG...AGCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTCAACCATAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp AGTCTTTCACTGTATATATCTTCTGCCCCGGGCCGATATATTGCCCATATTCATCAAAGGCTATCAGGCTaGGAACAAAGGCCAGACACT +
Preference number: 5 (lower is better)
Translates to: SLSLYISSAPGRYIAHIHQRLSG*EQRPDT
Trigger: AGTGTCTGGCCTTTGTTCCAAGCCTGATAGCCTTTG...ATGAATATGGGCAATATATCGGCCCGGGGCAGAAGATATATACAGTGAAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp AAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTTGTCCAAAGGCTATCAGGCTaGGAACAAAGGCCAGACACT +
Preference number: 5 (lower is better)
Translates to: KWWDVLLSYDENFSSLVVQRLSG*EQRPDT
Trigger: AGTGTCTGGCCTTTGTTCCAAGCCTGATAGCCTTTG...GACAACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp TCTGTTGCACTAGTAGATTCGTTCAACTGTGAGCTCAAGTTTTCCGAGGTTAGGAGAAGTCGTTGGGTCTaGATCAGCTTCTGTTGCACT +
Preference number: 5 (lower is better)
Translates to: SVALVDSFNCELKFSEVRRSRWV*ISFCCT
Trigger: AGTGCAACAGAAGCTGATCAAGACCCAACGACTTCT...CCTAACCTCGGAAAACTTGAGCTCACAGTTGAACGAATCTACTAGTGCAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp GGAACAAAGGCCAGACACTTGACATCAAGACTGGCTCCTATGAACCTGCTGTGTTTCCCTTGCTCAGGGTaGGCATATGTTTTTCAATTT +
Preference number: 5 (lower is better)
Translates to: GTKARHLTSRLAPMNLLCFPCSG*AYVFQF
Trigger: AAATTGAAAAACATATGCCAACCCTGAGCAAGGGAA...ACACAGCAGGTTCATAGGAGCCAGTCTTGATGTCAAGTGTCTGGCCTTTGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp CTTGTAGACGATCTCATTGAAGTCAGACCTGATGCAAACCAAAGAAGGGTCATTCCGCTGCATGATTTTTaGAGGAGTTCCCTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: LVDDLIEVRPDANQRRVIPLHDF*RSSLAQ
Trigger: CTGAGCAAGGGAACTCCTCAAAAAATCATGCAGCGG...AATGACCCTTCTTTGGTTTGCATCAGGTCTGACTTCAATGAGATCGTCTACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS TCA 90 bp CAAACAAACGCTGATGGAACAGAAATTTGCCAGCTATTAGTCCTGTaGGAATGGCAAGTAGCCATAGAAGCACCTTCAAAATCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: QTNADGTEICQLLVL*EWQVAIEAPSKSSS
Trigger: GCTGGAGGATTTTGAAGGTGCTTCTATGGCTACTTGCCATTCTCACAGGACTAATAGCTGGCAAATTTCTGTTCCATCAGCGTTTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266534.8
ENST00000546387.1
ENST00000546868.5
ENST00000551577.5
CDS CCA 90 bp GGTGTGCAAACCAGGGAGATTTACATCAACATCTCCCATGAAATGTaGGAATTCCCAGTCCTTAACGTACATAGATTAGAGTGTAGCAGG +
Preference number: 5 (lower is better)
Translates to: GVQTREIYINISHEM*EFPVLNVHRLECSR
Trigger: CCTGCTACACTCTAATCTATGTACGTTAAGGACTGGGAATTCCCACATTTCATGGGAGATGTTGATGTAAATCTCCCTGGTTTGCACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546978.1
CDS-3UTR CAA 90 bp GTAAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTTGTCTTCCAGAAAGCTCTaGCTGATTTTCCCCAGTCAG +
Preference number: 5 (lower is better)
Translates to: VNGGMCCSHMMKTSVPWLSSRKL*LIFPSQ
Trigger: CTGACTGGGGAAAATCAGCAAGAGCTTTCTGGAAGA...CAACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp CTAATCTTCCACTATGCTGTAAAGTCAGTAATAGCTTGTGCAATTGTGAAAAGCAATCCCCGATTCAGCTaGTCCCAGCTGATCCAGTCC +
Preference number: 5 (lower is better)
Translates to: LIFHYAVKSVIACAIVKSNPRFS*SQLIQS
Trigger: GGACTGGATCAGCTGGGACAAGCTGAATCGGGGATT...GCTTTTCACAATTGCACAAGCTATTACTGACTTTACAGCATAGTGGAAGATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp TCATCAGCTAATCTTCCACTATGCTGTAAAGTCAGTAATAGCTTGTGCAATTGTAATCCCCGATTCAGCTaGTCCCAGCTGATCCAGTCC +
Preference number: 5 (lower is better)
Translates to: SSANLPLCCKVSNSLCNCNPRFS*SQLIQS
Trigger: GGACTGGATCAGCTGGGACAAGCTGAATCGGGGATT...ACAATTGCACAAGCTATTACTGACTTTACAGCATAGTGGAAGATTAGCTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp GTGTTATCTCCAAGTCTATCTCCGAGTCTAGTTCGTAGGTGTACTTTTAGAAGTCCCCGGGCCGATATATaGCCCATATTCATGAGGTTT +
Preference number: 5 (lower is better)
Translates to: VLSPSLSPSLVRRCTFRSPRADI*PIFMRF
Trigger: AAACCTCATGAATATGGGCAATATATCGGCCCGGGG...ACTTCTAAAAGTACACCTACGAACTAGACTCGGAGATAGACTTGGAGATAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp AAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTTGTCCCTAGAAAAAGCATGTaGAGCACCGTTGTGGCATTG +
Preference number: 5 (lower is better)
Translates to: KWWDVLLSYDENFSSLVVPRKSM*STVVAL
Trigger: CAATGCCACAACGGTGCTCAACATGCTTTTTCTAGG...GACAACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp ATAAAGAATCCAAACCACACAAAGGCTATCAGGCTTGGAACAAAGGCCAGACACAAGGCACCACTATGGTaGAACATCAGATACATGGGT +
Preference number: 5 (lower is better)
Translates to: IKNPNHTKAIRLGTKARHKAPLW*NIRYMG
Trigger: ACCCATGTATCTGATGTTCAACCATAGTGGTGCCTT...GTGTCTGGCCTTTGTTCCAAGCCTGATAGCCTTTGTGTGGTTTGGATTCTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp TCTTCTACTGAAGCCTGGGTGTTTTCTCGAGTGATTCCCATGTCTTTGCTATGTAAGGCACCACTATGGTaGAACATCAGATACATGGGT +
Preference number: 5 (lower is better)
Translates to: SSTEAWVFSRVIPMSLLCKAPLW*NIRYMG
Trigger: ACCCATGTATCTGATGTTCAACCATAGTGGTGCCTT...ACATAGCAAAGACATGGGAATCACTCGAGAAAACACCCAGGCTTCAGTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp TTGAGGAGTTCCCTTGCTCAGGGTTGGCATATGTTTTTCAATTTTCACTATCCACCGCTGCATGATTTTTaGAGGAGTTCCCTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: LRSSLAQGWHMFFNFHYPPLHDF*RSSLAQ
Trigger: CTGAGCAAGGGAACTCCTCAAAAAATCATGCAGCGG...TGGATAGTGAAAATTGAAAAACATATGCCAACCCTGAGCAAGGGAACTCCTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp CTTTTAAACTTTCTGAGTCTTTCACTGTATATATCTTCTGCCCCGGGCCGATATTCTTCCAGAAAGCTCTaGCTGATTTTCCCCAGTCAG +
Preference number: 5 (lower is better)
Translates to: LLNFLSLSLYISSAPGRYSSRKL*LIFPSQ
Trigger: CTGACTGGGGAAAATCAGCAAGAGCTTTCTGGAAGA...ATATCGGCCCGGGGCAGAAGATATATACAGTGAAAGACTCAGAAAGTTTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp GTGTTATCTCCAAGTCTATCTCCGAGTCTAGTTCGTAGGTGTACTTTTAGAAGTTCTTCCAGAAAGCTCTaGCTGATTTTCCCCAGTCAG +
Preference number: 5 (lower is better)
Translates to: VLSPSLSPSLVRRCTFRSSSRKL*LIFPSQ
Trigger: CTGACTGGGGAAAATCAGCAAGAGCTTTCTGGAAGA...ACTTCTAAAAGTACACCTACGAACTAGACTCGGAGATAGACTTGGAGATAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp ATACATGGGTCATCAGCTAATCTTCCACTATGCTGTAAAGTCAGTAATAGCTTGACAAAGGCCAGACACTaGACATCAAGACTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: IHGSSANLPLCCKVSNSLTKARH*TSRLAP
Trigger: AGGAGCCAGTCTTGATGTCAAGTGTCTGGCCTTTGT...CAAGCTATTACTGACTTTACAGCATAGTGGAAGATTAGCTGATGACCCATGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp AAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTTGTCAGTGTAAGTTTTGTCTaGATTCTCCATGCGTGGCTC +
Preference number: 5 (lower is better)
Translates to: KWWDVLLSYDENFSSLVVSVSFV*ILHAWL
Trigger: GAGCCACGCATGGAGAATCAAGACAAAACTTACACT...GACAACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp CCACTATGGTTGAACATCAGATACATGGGTCATCAGCTAATCTTCCACTATGCTAGTGTAAGTTTTGTCTaGATTCTCCATGCGTGGCTC +
Preference number: 5 (lower is better)
Translates to: PLWLNIRYMGHQLIFHYASVSFV*ILHAWL
Trigger: GAGCCACGCATGGAGAATCAAGACAAAACTTACACT...AGCATAGTGGAAGATTAGCTGATGACCCATGTATCTGATGTTCAACCATAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp ATCATCACCTCATTTCAATTACTGGTGGGAGAAAGTCACATTTCACGAGTAGTGAGAAGTCGTTGGGTCTaGATCAGCTTCTGTTGCACT +
Preference number: 5 (lower is better)
Translates to: IITSFQLLVGESHISRVVRSRWV*ISFCCT
Trigger: AGTGCAACAGAAGCTGATCAAGACCCAACGACTTCT...CACTACTCGTGAAATGTGACTTTCTCCCACCAGTAATTGAAATGAGGTGATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp TCATTTCAATTACTGGTGGGAGAAAGTCACATTTCACGAGTAGTGACCCATGTTCCTAGAAAAAGCATGTaGAGCACCGTTGTGGCATTG +
Preference number: 5 (lower is better)
Translates to: SFQLLVGESHISRVVTHVPRKSM*STVVAL
Trigger: CAATGCCACAACGGTGCTCAACATGCTTTTTCTAGG...AACATGGGTCACTACTCGTGAAATGTGACTTTCTCCCACCAGTAATTGAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp GTAAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTTGAAGGCACCACTATGGTaGAACATCAGATACATGGGT +
Preference number: 5 (lower is better)
Translates to: VNGGMCCSHMMKTSVPWLKAPLW*NIRYMG
Trigger: ACCCATGTATCTGATGTTCAACCATAGTGGTGCCTT...CAACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp TGGGAATTCCCAGTCCTGCATCACAATAAGAAGGTCAAAGACCAAGATAAAAGATTCTCTGCAGTCCAGTaGTCAAAGTCACCAACTCTG +
Preference number: 5 (lower is better)
Translates to: WEFPVLHHNKKVKDQDKRFSAVQ*SKSPTL
Trigger: CAGAGTTGGTGACTTTGACAACTGGACTGCAGAGAA...TCTTTTATCTTGGTCTTTGACCTTCTTATTGTGATGCAGGACTGGGAATTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546868.5
CDS-3UTR CAA 90 bp GTGTTATCTCCAAGTCTATCTCCGAGTCTAGTTCGTAGGTGTACTTTTAGAAGTTTCTCTGCAGTCCAGTaGTCAAAGTCACCAACTCTG +
Preference number: 5 (lower is better)
Translates to: VLSPSLSPSLVRRCTFRSFSAVQ*SKSPTL
Trigger: CAGAGTTGGTGACTTTGACAACTGGACTGCAGAGAA...ACTTCTAAAAGTACACCTACGAACTAGACTCGGAGATAGACTTGGAGATAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp GTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTTGTCTGGGACTTTGTGACTTCAGTTCCTTGGTaGTCTGGGACTTTGTGTAAA +
Preference number: 5 (lower is better)
Translates to: VLLSYDENFSSLVVWDFVTSVPW*SGTLCK
Trigger: TTTACACAAAGTCCCAGACAACCAAGGAACTGAAGT...CACAAAGTCCCAGACAACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp AAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTTGTCGAAAACTTCAGTTCCTaGGTTGTCTGGGACTTTGTG +
Preference number: 5 (lower is better)
Translates to: KWWDVLLSYDENFSSLVVENFSS*VVWDFV
Trigger: CACAAAGTCCCAGACAACCAAGGAACTGAAGTTTTC...GACAACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp AATCCTAGAAAAAGCATGTTGAGCACCGTTGTGGCATTGTTCATATTTTTACCTCCCCGGGCCGATATATaGCCCATATTCATGAGGTTT +
Preference number: 5 (lower is better)
Translates to: NPRKSMLSTVVALFIFLPPRADI*PIFMRF
Trigger: AAACCTCATGAATATGGGCAATATATCGGCCCGGGG...AGGTAAAAATATGAACAATGCCACAACGGTGCTCAACATGCTTTTTCTAGGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp ATAAAGAATCCAAACCACACAAAGGCTATCAGGCTTGGAACAAAGGCCAGACACCATTCCCAGGATAGCTaGGTTCTGTTCAAATCTTTT +
Preference number: 5 (lower is better)
Translates to: IKNPNHTKAIRLGTKARHHSQDS*VLFKSF
Trigger: AAAAGATTTGAACAGAACCAAGCTATCCTGGGAATG...GTGTCTGGCCTTTGTTCCAAGCCTGATAGCCTTTGTGTGGTTTGGATTCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp AAATGGTGGGATGTGCTGCTCTCATATGATGAAAACTTCAGTTCCTTGGTTGTCCATTCCCAGGATAGCTaGGTTCTGTTCAAATCTTTT +
Preference number: 5 (lower is better)
Translates to: KWWDVLLSYDENFSSLVVHSQDS*VLFKSF
Trigger: AAAAGATTTGAACAGAACCAAGCTATCCTGGGAATG...GACAACCAAGGAACTGAAGTTTTCATCATATGAGAGCAGCACATCCCACCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp AGTCTTTCACTGTATATATCTTCTGCCCCGGGCCGATATATTGCCCATATTCATAGCACCGTTGTGGCATaGTTCATATTTTTACCTAAC +
Preference number: 5 (lower is better)
Translates to: SLSLYISSAPGRYIAHIHSTVVA*FIFLPN
Trigger: GTTAGGTAAAAATATGAACAATGCCACAACGGTGCT...ATGAATATGGGCAATATATCGGCCCGGGGCAGAAGATATATACAGTGAAAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp AAAACAATGAATCCTAGAAAAAGCATGTTGAGCACCGTTGTGGCATTGTTCATATTCTCTGCAGTCCAGTaGTCAAAGTCACCAACTCTG +
Preference number: 5 (lower is better)
Translates to: KTMNPRKSMLSTVVALFIFSAVQ*SKSPTL
Trigger: CAGAGTTGGTGACTTTGACAACTGGACTGCAGAGAA...TATGAACAATGCCACAACGGTGCTCAACATGCTTTTTCTAGGATTCATTGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp AGTCTTTCACTGTATATATCTTCTGCCCCGGGCCGATATATTGCCCATATTCATTTCCCTTGCTCAGGGTaGGCATATGTTTTTCAATTT +
Preference number: 5 (lower is better)
Translates to: SLSLYISSAPGRYIAHIHFPCSG*AYVFQF
Trigger: AAATTGAAAAACATATGCCAACCCTGAGCAAGGGAA...ATGAATATGGGCAATATATCGGCCCGGGGCAGAAGATATATACAGTGAAAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS TCA 90 bp AGTGATATTACATTTCATGGGTCATGGTACTTACCAAACAAACGCTaGTGGAACAGAAATTTGCCAGCTATTAGTCCTGTGAGAATGGCA +
Preference number: 5 (lower is better)
Translates to: SDITFHGSWYLPNKR*WNRNLPAISPVRMA
Trigger: TGCCATTCTCACAGGACTAATAGCTGGCAAATTTCTGTTCCATCAGCGTTTGTTTGGTAAGTACCATGACCCATGAAATGTAATATCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546387.1
CDS-3UTR CAA 90 bp ACACTCAAGGTTGCTTTTTGTGTTATCTCCAAGTCTATCTCCGAGTCTAGTTCGAAGTTACACTCAAGGTaGCTTTTTGTGTTATCTCCA +
Preference number: 5 (lower is better)
Translates to: TLKVAFCVISKSISESSSKLHSR*LFVLSP
Trigger: TGGAGATAACACAAAAAGCAACCTTGAGTGTAACTT...CGAACTAGACTCGGAGATAGACTTGGAGATAACACAAAAAGCAACCTTGAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp TTACACTCAAGGTTGCTTTTTGTGTTATCTCCAAGTCTATCTCCGAGTCTAGTTACTTCAGTTCCTTGGTaGTCTGGGACTTTGTGTAAA +
Preference number: 5 (lower is better)
Translates to: LHSRLLFVLSPSLSPSLVTSVPW*SGTLCK
Trigger: TTTACACAAAGTCCCAGACAACCAAGGAACTGAAGT...AACTAGACTCGGAGATAGACTTGGAGATAACACAAAAAGCAACCTTGAGTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp AACAAGACATTAAACAAATTCTTTCATGCACGGCTTCTCTACCTGACAAGGTTCCATTCCCAGGATAGCTaGGTTCTGTTCAAATCTTTT +
Preference number: 5 (lower is better)
Translates to: NKTLNKFFHARLLYLTRFHSQDS*VLFKSF
Trigger: AAAAGATTTGAACAGAACCAAGCTATCCTGGGAATG...GAACCTTGTCAGGTAGAGAAGCCGTGCATGAAAGAATTTGTTTAATGTCTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp TTTGAGGAGTTCCCTTGCTCAGGGTTGGCATATGTTTTTCAATTTTCACTATCCACTCAAGGTTGCTTTTaGTGTTATCTCCAAGTCTAT +
Preference number: 5 (lower is better)
Translates to: FEEFPCSGLAYVFQFSLSTQGCF*CYLQVY
Trigger: ATAGACTTGGAGATAACACAAAAAGCAACCTTGAGT...GGATAGTGAAAATTGAAAAACATATGCCAACCCTGAGCAAGGGAACTCCTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp TCATTTCAATTACTGGTGGGAGAAAGTCACATTTCACGAGTAGTGACCCATGTTAAGTTACACTCAAGGTaGCTTTTTGTGTTATCTCCA +
Preference number: 5 (lower is better)
Translates to: SFQLLVGESHISRVVTHVKLHSR*LFVLSP
Trigger: TGGAGATAACACAAAAAGCAACCTTGAGTGTAACTT...AACATGGGTCACTACTCGTGAAATGTGACTTTCTCCCACCAGTAATTGAAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp CTAATCTTCCACTATGCTGTAAAGTCAGTAATAGCTTGTGCAATTGTGAAAAGCACTTCAGTTCCTTGGTaGTCTGGGACTTTGTGTAAA +
Preference number: 5 (lower is better)
Translates to: LIFHYAVKSVIACAIVKSTSVPW*SGTLCK
Trigger: TTTACACAAAGTCCCAGACAACCAAGGAACTGAAGT...GCTTTTCACAATTGCACAAGCTATTACTGACTTTACAGCATAGTGGAAGATTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp ACAACCACAGACGTCAGAGTAAAAAGAACTGTCCAGAATAAAGTGATCCTAACAAAGTTACACTCAAGGTaGCTTTTTGTGTTATCTCCA +
Preference number: 5 (lower is better)
Translates to: TTTDVRVKRTVQNKVILTKLHSR*LFVLSP
Trigger: TGGAGATAACACAAAAAGCAACCTTGAGTGTAACTT...TGTTAGGATCACTTTATTCTGGACAGTTCTTTTTACTCTGACGTCTGTGGTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546868.5
CDS-3UTR CAA 90 bp AAAACAATGAATCCTAGAAAAAGCATGTTGAGCACCGTTGTGGCATTGTTCATAAGCACCGTTGTGGCATaGTTCATATTTTTACCTAAC +
Preference number: 5 (lower is better)
Translates to: KTMNPRKSMLSTVVALFISTVVA*FIFLPN
Trigger: GTTAGGTAAAAATATGAACAATGCCACAACGGTGCT...TATGAACAATGCCACAACGGTGCTCAACATGCTTTTTCTAGGATTCATTGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp CTAATCTTCCACTATGCTGTAAAGTCAGTAATAGCTTGTGCAATTGTGAAAAGCAGCACCGTTGTGGCATaGTTCATATTTTTACCTAAC +
Preference number: 5 (lower is better)
Translates to: LIFHYAVKSVIACAIVKSSTVVA*FIFLPN
Trigger: GTTAGGTAAAAATATGAACAATGCCACAACGGTGCT...GCTTTTCACAATTGCACAAGCTATTACTGACTTTACAGCATAGTGGAAGATTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp CTAATCTTCCACTATGCTGTAAAGTCAGTAATAGCTTGTGCAATTGTGAAAAGCTTCCCTTGCTCAGGGTaGGCATATGTTTTTCAATTT +
Preference number: 5 (lower is better)
Translates to: LIFHYAVKSVIACAIVKSFPCSG*AYVFQF
Trigger: AAATTGAAAAACATATGCCAACCCTGAGCAAGGGAA...GCTTTTCACAATTGCACAAGCTATTACTGACTTTACAGCATAGTGGAAGATTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS TCA 90 bp GAAAAACAGTTTCCAACAACAATAACATTGGCTTCTGTTTGGCTATaGGAAACTGGGTCCTCCGCAAATATTAAGAAGTTAAAGAAGATC +
Preference number: 5 (lower is better)
Translates to: EKQFPTTITLASVWL*ETGSSANIKKLKKI
Trigger: GATCTTCTTTAACTTCTTAATATTTGCGGAGGACCCAGTTTCTCATAGCCAAACAGAAGCCAATGTTATTGTTGTTGGAAACTGTTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000266534.8
ENST00000546387.1
ENST00000546868.5
ENST00000551577.5
CDS-3UTR CAA 90 bp TCATCAGCTAATCTTCCACTATGCTGTAAAGTCAGTAATAGCTTGTGCAATTGTACTCAAGGTTGCTTTTaGTGTTATCTCCAAGTCTAT +
Preference number: 5 (lower is better)
Translates to: SSANLPLCCKVSNSLCNCTQGCF*CYLQVY
Trigger: ATAGACTTGGAGATAACACAAAAAGCAACCTTGAGT...ACAATTGCACAAGCTATTACTGACTTTACAGCATAGTGGAAGATTAGCTGATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546868.5
ENST00000551577.5
CDS GCA 72 bp AGTTTACCCGAAGGGTCGCGCGGGGCGCGGGGCGACTaGACACGGGATTCGCGGTCGAGCACAGCCCTCGGC +
Preference number: 6 (lower is better)
Translates to: SLPEGSRGARGD*TRDSRSSTALG
Trigger: GCCGAGGGCTGTGCTCGACCGCGAATCCCGTGTGCAGTCGCCCCGCGCCCCGCGCGACCCTTCGGGTAAACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266534.8
ENST00000546387.1
ENST00000551577.5
CDS GCA 72 bp AAGCGCGGCGAGACGGGCCGGCGGCGTCGCTGCCGCTaGTGCTGTCACGGAGCTATAAATACCGGCTCGGCC +
Preference number: 6 (lower is better)
Translates to: KRGETGRRRRCR*CCHGAINTGSA
Trigger: GGCCGAGCCGGTATTTATAGCTCCGTGACAGCAGCAGCGGCAGCGACGCCGCCGGCCCGTCTCGCCGCGCTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546387.1
CDS TCA 72 bp ACAGCACTCCAACGACCTCCAGTCTCCAGCTTCGACTaGTCTGAAACTTGCCACGTTGACTTTCAATACACT +
Preference number: 6 (lower is better)
Translates to: TALQRPPVSSFD*SETCHVDFQYT
Trigger: AGTGTATTGAAAGTCAACGTGGCAAGTTTCAGATCAGTCGAAGCTGGAGACTGGAGGTCGTTGGAGTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553253.5
CDS TCA 72 bp GCTGATGGAACAGAAATTTGCCAGCTATTAGTCCTGTaGGAATGGCAAGTAGCCATAGAAGCACCTTCAAAA +
Preference number: 6 (lower is better)
Translates to: ADGTEICQLLVL*EWQVAIEAPSK
Trigger: TTTTGAAGGTGCTTCTATGGCTACTTGCCATTCTCACAGGACTAATAGCTGGCAAATTTCTGTTCCATCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266534.8
ENST00000546387.1
ENST00000546868.5
ENST00000551577.5
CDS CCA 72 bp ACCAGGGAGATTTACATCAACATCTCCCATGAAATGTaGGAATTCCCAGTCCTTAACGTACATAGATTAGAG +
Preference number: 6 (lower is better)
Translates to: TREIYINISHEM*EFPVLNVHRLE
Trigger: CTCTAATCTATGTACGTTAAGGACTGGGAATTCCCACATTTCATGGGAGATGTTGATGTAAATCTCCCTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546978.1
CDS TCA 72 bp TTTCCAACAACAATAACATTGGCTTCTGTTTGGCTATaGGAAACTGGGTCCTCCGCAAATATTAAGAAGTTA +
Preference number: 6 (lower is better)
Translates to: FPTTITLASVWL*ETGSSANIKKL
Trigger: TAACTTCTTAATATTTGCGGAGGACCCAGTTTCTCATAGCCAAACAGAAGCCAATGTTATTGTTGTTGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266534.8
ENST00000546387.1
ENST00000546868.5
ENST00000551577.5