RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM115 (Homo sapiens)

Ensembl gene IDs: ENSG00000126062

Ensembl transcript IDs: ENST00000266025.4

Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCACTTGCTTGGGGCTGCCAGCTGATGTACATTCTTACCTCAGATaGGGGCCTGGACTGGCCGATGCCTCAGAGGCTCCGGGCCTGGCA +
Preference number: 1 (lower is better)
Translates to: ATCLGLPADVHSYLR*GPGLADASEAPGLA
Trigger: TGCCAGGCCCGGAGCCTCTGAGGCATCGGCCAGTCCAGGCCCTCATCTGAGGTAAGAATGTACATCAGCTGGCAGCCCCAAGCAAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR TCA 90 bp AAATCCTTGCCTTGGCTCAGGGCTCTCGGCAACCAGTTTCAGATGTaGGGGCCGGCCCAGGAGCTGTGGCATCAGTGTCCCTGCAGCCAC +
Preference number: 1 (lower is better)
Translates to: KSLPWLRALGNQFQM*GPAQELWHQCPCSH
Trigger: GTGGCTGCAGGGACACTGATGCCACAGCTCCTGGGCCGGCCCTCACATCTGAAACTGGTTGCCGAGAGCCCTGAGCCAAGGCAAGGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR CCA 90 bp ACTGGCCGATGCCTCAGAGGCTCCGGGCCTGGCATAGTGGTTGTCTaGAGTTGGAACCAGGTAGCAAGAGTCCTGGGTAGTGTTGGCGAG +
Preference number: 1 (lower is better)
Translates to: TGRCLRGSGPGIVVV*SWNQVARVLGSVGE
Trigger: CTCGCCAACACTACCCAGGACTCTTGCTACCTGGTTCCAACTCCAGACAACCACTATGCCAGGCCCGGAGCCTCTGAGGCATCGGCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR CCA 90 bp TCAGATGAGGGCCTGGACTGGCCGATGCCTCAGAGGCTCCGGGCCTaGCATAGTGGTTGTCTGGAGTTGGAACCAGGTAGCAAGAGTCCT +
Preference number: 1 (lower is better)
Translates to: SDEGLDWPMPQRLRA*HSGCLELEPGSKSP
Trigger: AGGACTCTTGCTACCTGGTTCCAACTCCAGACAACCACTATGCCAGGCCCGGAGCCTCTGAGGCATCGGCCAGTCCAGGCCCTCATCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR CCA 90 bp GGCTGCCAGCTGATGTACATTCTTACCTCAGATGAGGGCCTGGACTaGCCGATGCCTCAGAGGCTCCGGGCCTGGCATAGTGGTTGTCTG +
Preference number: 1 (lower is better)
Translates to: GCQLMYILTSDEGLD*PMPQRLRAWHSGCL
Trigger: CAGACAACCACTATGCCAGGCCCGGAGCCTCTGAGGCATCGGCCAGTCCAGGCCCTCATCTGAGGTAAGAATGTACATCAGCTGGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR GCA 90 bp CCAGGAGCTGTGGCATCAGTGTCCCTGCAGCCACTTGCTTGGGGCTaGCAGCTGATGTACATTCTTACCTCAGATGAGGGCCTGGACTGG +
Preference number: 1 (lower is better)
Translates to: PGAVASVSLQPLAWG*QLMYILTSDEGLDW
Trigger: CCAGTCCAGGCCCTCATCTGAGGTAAGAATGTACATCAGCTGGCAGCCCCAAGCAAGTGGCTGCAGGGACACTGATGCCACAGCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR CCA 90 bp AGCCTGGGCTTGGCTGCCCACTCAAGTGGTCCTGTAGAAAATACCTaGGAGCTGGAGCTGTTCTGGTCCAGAAGCAGTCACCGCCACAGC +
Preference number: 1 (lower is better)
Translates to: SLGLAAHSSGPVENT*ELELFWSRSSHRHS
Trigger: GCTGTGGCGGTGACTGCTTCTGGACCAGAACAGCTCCAGCTCCCAGGTATTTTCTACAGGACCACTTGAGTGGGCAGCCAAGCCCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR CCA 90 bp CGATGCCTCAGAGGCTCCGGGCCTGGCATAGTGGTTGTCTGGAGTTaGAACCAGGTAGCAAGAGTCCTGGGTAGTGTTGGCGAGAAACAG +
Preference number: 1 (lower is better)
Translates to: RCLRGSGPGIVVVWS*NQVARVLGSVGEKQ
Trigger: CTGTTTCTCGCCAACACTACCCAGGACTCTTGCTACCTGGTTCCAACTCCAGACAACCACTATGCCAGGCCCGGAGCCTCTGAGGCATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR GCA 90 bp GGCTCCTGCATTTGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTaGCTTGGCTCAGGGCTCTCGGCAACCAGTTTCAGATGTGAGGGC +
Preference number: 1 (lower is better)
Translates to: GSCICWAPRTFLANP*LGSGLSATSFRCEG
Trigger: GCCCTCACATCTGAAACTGGTTGCCGAGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCAAATGCAGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR CCA 90 bp CACTCAAGTGGTCCTGTAGAAAATACCTGGGAGCTGGAGCTGTTCTaGTCCAGAAGCAGTCACCGCCACAGCAGAGGGAAACAAATCCTG +
Preference number: 1 (lower is better)
Translates to: HSSGPVENTWELELF*SRSSHRHSRGKQIL
Trigger: CAGGATTTGTTTCCCTCTGCTGTGGCGGTGACTGCTTCTGGACCAGAACAGCTCCAGCTCCCAGGTATTTTCTACAGGACCACTTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR-3UTR GCA 90 bp TCAGGGCTCTCGGCAACCAGTTTCAGATGTGAGGGCCGGCCCAGGAGCTGTGGCGCCTGGACTGGCCGATaGCTCAGAGGCTCCGGGCCT +
Preference number: 2 (lower is better)
Translates to: SGLSATSFRCEGRPRSCGAWTGR*LRGSGP
Trigger: AGGCCCGGAGCCTCTGAGGCATCGGCCAGTCCAGGC...GCCACAGCTCCTGGGCCGGCCCTCACATCTGAAACTGGTTGCCGAGAGCCCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR-3UTR CCA 90 bp TCAGGGCTCTCGGCAACCAGTTTCAGATGTGAGGGCCGGCCCAGGAGCTGTGGCCAGAGGCTCCGGGCCTaGCATAGTGGTTGTCTGGAG +
Preference number: 2 (lower is better)
Translates to: SGLSATSFRCEGRPRSCGQRLRA*HSGCLE
Trigger: CTCCAGACAACCACTATGCCAGGCCCGGAGCCTCTG...GCCACAGCTCCTGGGCCGGCCCTCACATCTGAAACTGGTTGCCGAGAGCCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR-3UTR GCA 90 bp GCTGGAGCTGTTCTGGTCCAGAAGCAGTCACCGCCACAGCAGAGGGAAACAAATCCCCAGGTCGGCTCCTaGATTTGCTGGGCCCCCAGA +
Preference number: 2 (lower is better)
Translates to: AGAVLVQKQSPPQQRETNPQVGS*ICWAPR
Trigger: TCTGGGGGCCCAGCAAATGCAGGAGCCGACCTGGGG...ATTTGTTTCCCTCTGCTGTGGCGGTGACTGCTTCTGGACCAGAACAGCTCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR-3UTR CCA 90 bp TGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGGCTCTCGGATGAGGGCCTGGACTaGCCGATGCCTCAGAGGCTC +
Preference number: 2 (lower is better)
Translates to: CWAPRTFLANPCLGSGLSDEGLD*PMPQRL
Trigger: GAGCCTCTGAGGCATCGGCCAGTCCAGGCCCTCATC...CGAGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR CAA 90 bp CCTGCATTTGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTGCCTaGGCTCAGGGCTCTCGGCAACCAGTTTCAGATGTGAGGGCCGGC +
Preference number: 2 (lower is better)
Translates to: PAFAGPPEHFWQILA*AQGSRQPVSDVRAG
Trigger: GCCGGCCCTCACATCTGAAACTGGTTGCCGAGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCAAATGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR-3UTR CCA 90 bp GCGAGCCTGGGCTTGGCTGCCCACTCAAGTGGTCCTGTAGAAAATACCTGGGAGAACAGCAGAAGGCCATaGAAAGCCCCAGCAGGCCTT +
Preference number: 2 (lower is better)
Translates to: ASLGLAAHSSGPVENTWENSRRP*KAPAGL
Trigger: AAGGCCTGCTGGGGCTTTCCATGGCCTTCTGCTGTT...CTCCCAGGTATTTTCTACAGGACCACTTGAGTGGGCAGCCAAGCCCAGGCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR-3UTR GCA 90 bp TGCCCACTCAAGTGGTCCTGTAGAAAATACCTGGGAGCTGGAGCTGTTCTGGTCGCTTGGGAGGGGAGGTaGCACACTCAAGGTGGTCTG +
Preference number: 2 (lower is better)
Translates to: CPLKWSCRKYLGAGAVLVAWEGR*HTQGGL
Trigger: CAGACCACCTTGAGTGTGGCACCTCCCCTCCCAAGC...GACCAGAACAGCTCCAGCTCCCAGGTATTTTCTACAGGACCACTTGAGTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR-3UTR GCA 90 bp CAAGAGTCCTGGGTAGTGTTGGCGAGAAACAGCAGAAGGCCATGGAAAGCCCCACTCAGAGCAGTCAGGTaGCCTGGAGTAGCTGAGAGG +
Preference number: 2 (lower is better)
Translates to: QESWVVLARNSRRPWKAPLRAVR*PGVAER
Trigger: CCTCTCAGCTACTCCAGGGCACCTGACTGCTCTGAG...TGGGGCTTTCCATGGCCTTCTGCTGTTTCTCGCCAACACTACCCAGGACTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR-3UTR GCA 90 bp TGCATTTGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGGGTCCCTGCAGCCACTTaGTTGGGGCTGCCAGCTGAT +
Preference number: 2 (lower is better)
Translates to: CICWAPRTFLANPCLGSGVPAAT*LGLPAD
Trigger: ATCAGCTGGCAGCCCCAAGCAAGTGGCTGCAGGGAC...CCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCAAATGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR-3UTR GCA 90 bp CCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGGCTCTCGGCAACCATGGCATCAGTGTCCCTaGAGCCACTTGCTTGGGGCT +
Preference number: 2 (lower is better)
Translates to: PPEHFWQILALAQGSRQPWHQCP*SHLLGA
Trigger: AGCCCCAAGCAAGTGGCTGCAGGGACACTGATGCCA...TGGTTGCCGAGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR-3UTR GCA 90 bp GCGAGCCTGGGCTTGGCTGCCCACTCAAGTGGTCCTGTAGAAAATACCTGGGAGTTTTTGGCAAATCCTTaGCTTGGCTCAGGGCTCTCG +
Preference number: 2 (lower is better)
Translates to: ASLGLAAHSSGPVENTWEFLANP*LGSGLS
Trigger: CGAGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAA...CTCCCAGGTATTTTCTACAGGACCACTTGAGTGGGCAGCCAAGCCCAGGCTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR-3UTR CCA 90 bp TGGCAAATCCTTGCCTTGGCTCAGGGCTCTCGGCAACCAGTTTCAGATGTGAGGGTGGTTGTCTGGAGTTaGAACCAGGTAGCAAGAGTC +
Preference number: 2 (lower is better)
Translates to: WQILALAQGSRQPVSDVRVVVWS*NQVARV
Trigger: GACTCTTGCTACCTGGTTCCAACTCCAGACAACCAC...CCTCACATCTGAAACTGGTTGCCGAGAGCCCTGAGCCAAGGCAAGGATTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR-3UTR CCA 90 bp TTTATTGATACTGCGAGCCTGGGCTTGGCTGCCCACTCAAGTGGTCCTGTAGAAGGCATAGTGGTTGTCTaGAGTTGGAACCAGGTAGCA +
Preference number: 2 (lower is better)
Translates to: FIDTASLGLAAHSSGPVEGIVVV*SWNQVA
Trigger: TGCTACCTGGTTCCAACTCCAGACAACCACTATGCC...TTCTACAGGACCACTTGAGTGGGCAGCCAAGCCCAGGCTCGCAGTATCAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR TCA 72 bp CCTTGGCTCAGGGCTCTCGGCAACCAGTTTCAGATGTaGGGGCCGGCCCAGGAGCTGTGGCATCAGTGTCCC +
Preference number: 3 (lower is better)
Translates to: PWLRALGNQFQM*GPAQELWHQCP
Trigger: GGGACACTGATGCCACAGCTCCTGGGCCGGCCCTCACATCTGAAACTGGTTGCCGAGAGCCCTGAGCCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR CCA 72 bp GGCCTGGACTGGCCGATGCCTCAGAGGCTCCGGGCCTaGCATAGTGGTTGTCTGGAGTTGGAACCAGGTAGC +
Preference number: 3 (lower is better)
Translates to: GLDWPMPQRLRA*HSGCLELEPGS
Trigger: GCTACCTGGTTCCAACTCCAGACAACCACTATGCCAGGCCCGGAGCCTCTGAGGCATCGGCCAGTCCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR TCA 72 bp TTGGGGCTGCCAGCTGATGTACATTCTTACCTCAGATaGGGGCCTGGACTGGCCGATGCCTCAGAGGCTCCG +
Preference number: 3 (lower is better)
Translates to: LGLPADVHSYLR*GPGLADASEAP
Trigger: CGGAGCCTCTGAGGCATCGGCCAGTCCAGGCCCTCATCTGAGGTAAGAATGTACATCAGCTGGCAGCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR-3UTR CAA 90 bp CCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGGCTCTCGGCAACCACCTGCAGCCACTTGCTaGGGGCTGCCAGCTGATGTA +
Preference number: 3 (lower is better)
Translates to: PPEHFWQILALAQGSRQPPAATC*GLPADV
Trigger: TACATCAGCTGGCAGCCCCAAGCAAGTGGCTGCAGG...TGGTTGCCGAGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR-3UTR CAA 90 bp GGGAGCTGGAGCTGTTCTGGTCCAGAAGCAGTCACCGCCACAGCAGAGGGAAACGCCCCCAGAACATTTTaGGCAAATCCTTGCCTTGGC +
Preference number: 3 (lower is better)
Translates to: GSWSCSGPEAVTATAEGNAPRTF*ANPCLG
Trigger: GCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGC...GTTTCCCTCTGCTGTGGCGGTGACTGCTTCTGGACCAGAACAGCTCCAGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR CCA 72 bp TCCTGGGTAGTGTTGGCGAGAAACAGCAGAAGGCCATaGAAAGCCCCAGCAGGCCTTCTTCCCTCTCCTCAG +
Preference number: 3 (lower is better)
Translates to: SWVVLARNSRRP*KAPAGLLPSPQ
Trigger: CTGAGGAGAGGGAAGAAGGCCTGCTGGGGCTTTCCATGGCCTTCTGCTGTTTCTCGCCAACACTACCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR CCA 72 bp AGAGGCTCCGGGCCTGGCATAGTGGTTGTCTGGAGTTaGAACCAGGTAGCAAGAGTCCTGGGTAGTGTTGGC +
Preference number: 3 (lower is better)
Translates to: RGSGPGIVVVWS*NQVARVLGSVG
Trigger: GCCAACACTACCCAGGACTCTTGCTACCTGGTTCCAACTCCAGACAACCACTATGCCAGGCCCGGAGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR CCA 72 bp CTGATGTACATTCTTACCTCAGATGAGGGCCTGGACTaGCCGATGCCTCAGAGGCTCCGGGCCTGGCATAGT +
Preference number: 3 (lower is better)
Translates to: LMYILTSDEGLD*PMPQRLRAWHS
Trigger: ACTATGCCAGGCCCGGAGCCTCTGAGGCATCGGCCAGTCCAGGCCCTCATCTGAGGTAAGAATGTACATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR GCA 72 bp GTGGCATCAGTGTCCCTGCAGCCACTTGCTTGGGGCTaGCAGCTGATGTACATTCTTACCTCAGATGAGGGC +
Preference number: 3 (lower is better)
Translates to: VASVSLQPLAWG*QLMYILTSDEG
Trigger: GCCCTCATCTGAGGTAAGAATGTACATCAGCTGGCAGCCCCAAGCAAGTGGCTGCAGGGACACTGATGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR CCA 72 bp TCGGCTCCTGCATTTGCTGGGCCCCCAGAACATTTTTaGCAAATCCTTGCCTTGGCTCAGGGCTCTCGGCAA +
Preference number: 3 (lower is better)
Translates to: SAPAFAGPPEHF*QILALAQGSRQ
Trigger: TTGCCGAGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCAAATGCAGGAGCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR CCA 72 bp GGTCCTGTAGAAAATACCTGGGAGCTGGAGCTGTTCTaGTCCAGAAGCAGTCACCGCCACAGCAGAGGGAAA +
Preference number: 3 (lower is better)
Translates to: GPVENTWELELF*SRSSHRHSRGK
Trigger: TTTCCCTCTGCTGTGGCGGTGACTGCTTCTGGACCAGAACAGCTCCAGCTCCCAGGTATTTTCTACAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR GCA 72 bp ATTTGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTaGCTTGGCTCAGGGCTCTCGGCAACCAGTTTCAGA +
Preference number: 3 (lower is better)
Translates to: ICWAPRTFLANP*LGSGLSATSFR
Trigger: TCTGAAACTGGTTGCCGAGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp ACCTCAGATGAGGGCCTGGACTGGCCGATGCCTCAGAGGCTCCGGGCCTGGCATCTAGTCCGGCCCCGATaGGAGGCCCAGGCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: TSDEGLDWPMPQRLRAWHLVRPR*EAQARP
Trigger: AGGCCGGGCCTGGGCCTCCCATCGGGGCCGGACTAG...ATGCCAGGCCCGGAGCCTCTGAGGCATCGGCCAGTCCAGGCCCTCATCTGAGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR TCA 90 bp CAGAGGCTCCGGGCCTGGCATAGTGGTTGTCTGGAGTTGGAACCAGGTAGCAAGCCCTCGCCCGGGACCTaGGGGAAGGCCCTGGACGGC +
Preference number: 4 (lower is better)
Translates to: QRLRAWHSGCLELEPGSKPSPGT*GKALDG
Trigger: GCCGTCCAGGGCCTTCCCTCAGGTCCCGGGCGAGGG...CTTGCTACCTGGTTCCAACTCCAGACAACCACTATGCCAGGCCCGGAGCCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp ACCTCAGATGAGGGCCTGGACTGGCCGATGCCTCAGAGGCTCCGGGCCTGGCATGCTCGGCCTGGCTCCTaGCTTCGACCGTACCTCTTC +
Preference number: 4 (lower is better)
Translates to: TSDEGLDWPMPQRLRAWHARPGS*LRPYLF
Trigger: GAAGAGGTACGGTCGAAGCCAGGAGCCAGGCCGAGC...ATGCCAGGCCCGGAGCCTCTGAGGCATCGGCCAGTCCAGGCCCTCATCTGAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp GTGTTGGCGAGAAACAGCAGAAGGCCATGGAAAGCCCCAGCAGGCCTTCTTCCCCCTGAGGGAAGGCCCTaGACGGCTGCGGCACGCCCG +
Preference number: 4 (lower is better)
Translates to: VLARNSRRPWKAPAGLLPPEGRP*TAAARP
Trigger: CGGGCGTGCCGCAGCCGTCCAGGGCCTTCCCTCAGG...GGGAAGAAGGCCTGCTGGGGCTTTCCATGGCCTTCTGCTGTTTCTCGCCAACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR TCA 90 bp GGGAGCTGGAGCTGTTCTGGTCCAGAAGCAGTCACCGCCACAGCAGAGGGAAACCTCCGCTCGGCGTCTTaGGGGTCTGTGCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GSWSCSGPEAVTATAEGNLRSAS*GSVPGR
Trigger: CCTGCCAGGCACAGACCCTCAAGACGCCGAGCGGAG...GTTTCCCTCTGCTGTGGCGGTGACTGCTTCTGGACCAGAACAGCTCCAGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR GCA 90 bp CTGGGAGCTGGAGCTGTTCTGGTCCAGAAGCAGTCACCGCCACAGCAGAGGGAAAGAATGGCCCCCAAGTaGTGGCGGGCGCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LGAGAVLVQKQSPPQQRERMAPK*WRAPGR
Trigger: CCTGCCAGGCGCCCGCCAGCACTTGGGGGCCATTCT...TTCCCTCTGCTGTGGCGGTGACTGCTTCTGGACCAGAACAGCTCCAGCTCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp TGGCGAGAAACAGCAGAAGGCCATGGAAAGCCCCAGCAGGCCTTCTTCCCTCTCGATCGGGTGGGGCTCTaGTCCCGAGGGGCCGAGTCG +
Preference number: 4 (lower is better)
Translates to: WRETAEGHGKPQQAFFPLDRVGL*SRGAES
Trigger: CGACTCGGCCCCTCGGGACCAGAGCCCCACCCGATC...GAGAGGGAAGAAGGCCTGCTGGGGCTTTCCATGGCCTTCTGCTGTTTCTCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR GCA 90 bp TGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGGCTCTCGAAGGCCCTGGACGGCTaGGGCACGCCCGCCTACCCA +
Preference number: 4 (lower is better)
Translates to: CWAPRTFLANPCLGSGLSKALDG*GTPAYP
Trigger: TGGGTAGGCGGGCGTGCCGCAGCCGTCCAGGGCCTT...CGAGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR GCA 90 bp TCAGGGCTCTCGGCAACCAGTTTCAGATGTGAGGGCCGGCCCAGGAGCTGTGGCGCTTGGGAGGGGAGGTaGCACACTCAAGGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SGLSATSFRCEGRPRSCGAWEGR*HTQGGL
Trigger: CAGACCACCTTGAGTGTGGCACCTCCCCTCCCAAGC...GCCACAGCTCCTGGGCCGGCCCTCACATCTGAAACTGGTTGCCGAGAGCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp GCAAATCCTTGCCTTGGCTCAGGGCTCTCGGCAACCAGTTTCAGATGTGAGGGCCCGCTTCCGATCGGGTaGGGCTCTGGTCCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: ANPCLGSGLSATSFRCEGPLPIG*GSGPEG
Trigger: CCCCTCGGGACCAGAGCCCCACCCGATCGGAAGCGG...GCCCTCACATCTGAAACTGGTTGCCGAGAGCCCTGAGCCAAGGCAAGGATTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp TTACCTCAGATGAGGGCCTGGACTGGCCGATGCCTCAGAGGCTCCGGGCCTGGCGTGGCGAAAGCAAAGTaGTCAGCCATGTCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: LPQMRAWTGRCLRGSGPGVAKAK*SAMSPR
Trigger: CCGAGGGGACATGGCTGACCACTTTGCTTTCGCCAC...GCCAGGCCCGGAGCCTCTGAGGCATCGGCCAGTCCAGGCCCTCATCTGAGGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR TCA 90 bp ACCTCAGATGAGGGCCTGGACTGGCCGATGCCTCAGAGGCTCCGGGCCTGGCATCATTCTTACCTCAGATaGGGGCCTGGACTGGCCGAT +
Preference number: 4 (lower is better)
Translates to: TSDEGLDWPMPQRLRAWHHSYLR*GPGLAD
Trigger: ATCGGCCAGTCCAGGCCCTCATCTGAGGTAAGAATG...ATGCCAGGCCCGGAGCCTCTGAGGCATCGGCCAGTCCAGGCCCTCATCTGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR GCA 90 bp TCAGGGCTCTCGGCAACCAGTTTCAGATGTGAGGGCCGGCCCAGGAGCTGTGGCCTCAGAGCAGTCAGGTaGCCTGGAGTAGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: SGLSATSFRCEGRPRSCGLRAVR*PGVAER
Trigger: CCTCTCAGCTACTCCAGGGCACCTGACTGCTCTGAG...GCCACAGCTCCTGGGCCGGCCCTCACATCTGAAACTGGTTGCCGAGAGCCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR GCA 90 bp TGCCTCAGAGGCTCCGGGCCTGGCATAGTGGTTGTCTGGAGTTGGAACCAGGTACCCCAGGTCGGCTCCTaGATTTGCTGGGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: CLRGSGPGIVVVWSWNQVPQVGS*ICWAPR
Trigger: TCTGGGGGCCCAGCAAATGCAGGAGCCGACCTGGGG...TACCTGGTTCCAACTCCAGACAACCACTATGCCAGGCCCGGAGCCTCTGAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp CAGAGGCTCCGGGCCTGGCATAGTGGTTGTCTGGAGTTGGAACCAGGTAGCAAGAGCTCCCGCTCGGCCTaGCTCCTGGCTTCGACCGTA +
Preference number: 4 (lower is better)
Translates to: QRLRAWHSGCLELEPGSKSSRSA*LLASTV
Trigger: TACGGTCGAAGCCAGGAGCCAGGCCGAGCGGGAGCT...CTTGCTACCTGGTTCCAACTCCAGACAACCACTATGCCAGGCCCGGAGCCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp TGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGGCTCTCGTGGCGCTGGCCAGAATaGCCCCCAAGTGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: CWAPRTFLANPCLGSGLSWRWPE*PPSAGG
Trigger: CCCGCCAGCACTTGGGGGCCATTCTGGCCAGCGCCA...CGAGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp ACCTCAGATGAGGGCCTGGACTGGCCGATGCCTCAGAGGCTCCGGGCCTGGCATACACTCAAGGTGGTCTaGAGTTACAGCGTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: TSDEGLDWPMPQRLRAWHTLKVV*SYSVGG
Trigger: TCCCCCGACGCTGTAACTCCAGACCACCTTGAGTGT...ATGCCAGGCCCGGAGCCTCTGAGGCATCGGCCAGTCCAGGCCCTCATCTGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp ACCTCAGATGAGGGCCTGGACTGGCCGATGCCTCAGAGGCTCCGGGCCTGGCATCAGGAACAGTCTTTCTaGGGATGGGCAGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: TSDEGLDWPMPQRLRAWHQEQSF*GWAGMC
Trigger: GCACATCCCTGCCCATCCCCAGAAAGACTGTTCCTG...ATGCCAGGCCCGGAGCCTCTGAGGCATCGGCCAGTCCAGGCCCTCATCTGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR GCA 90 bp TGCCTCAGAGGCTCCGGGCCTGGCATAGTGGTTGTCTGGAGTTGGAACCAGGTACCTGGCAGGGCACGTTaGATCTTCCTGGCGGCTGTC +
Preference number: 4 (lower is better)
Translates to: CLRGSGPGIVVVWSWNQVPGRAR*IFLAAV
Trigger: GACAGCCGCCAGGAAGATGCAACGTGCCCTGCCAGG...TACCTGGTTCCAACTCCAGACAACCACTATGCCAGGCCCGGAGCCTCTGAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp GCGAGCCTGGGCTTGGCTGCCCACTCAAGTGGTCCTGTAGAAAATACCTGGGAGGATGAGGGCCTGGACTaGCCGATGCCTCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: ASLGLAAHSSGPVENTWEDEGLD*PMPQRL
Trigger: GAGCCTCTGAGGCATCGGCCAGTCCAGGCCCTCATC...CTCCCAGGTATTTTCTACAGGACCACTTGAGTGGGCAGCCAAGCCCAGGCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR TCA 90 bp TGCCCACTCAAGTGGTCCTGTAGAAAATACCTGGGAGCTGGAGCTGTTCTGGTCAGAGGTAGCCCGGGGTaGCCGCCAGGCAGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: CPLKWSCRKYLGAGAVLVRGSPG*PPGSLC
Trigger: ACACAGGCTGCCTGGCGGTCACCCCGGGCTACCTCT...GACCAGAACAGCTCCAGCTCCCAGGTATTTTCTACAGGACCACTTGAGTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR GCA 90 bp TGCATTTGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGGGCCTGGACTGGCCGATaGCTCAGAGGCTCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: CICWAPRTFLANPCLGSGAWTGR*LRGSGP
Trigger: AGGCCCGGAGCCTCTGAGGCATCGGCCAGTCCAGGC...CCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCAAATGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp CTGGAGCTGTTCTGGTCCAGAAGCAGTCACCGCCACAGCAGAGGGAAACAAATCCCACCACGCTGGCGCTaGCCAGAATGGCCCCCAAGT +
Preference number: 4 (lower is better)
Translates to: LELFWSRSSHRHSRGKQIPPRWR*PEWPPS
Trigger: ACTTGGGGGCCATTCTGGCCAGCGCCAGCGTGGTGG...GATTTGTTTCCCTCTGCTGTGGCGGTGACTGCTTCTGGACCAGAACAGCTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp TGCCTCAGAGGCTCCGGGCCTGGCATAGTGGTTGTCTGGAGTTGGAACCAGGTATGCTCCATCAGCCCATaGGTGGCCAGGGTCCAGATC +
Preference number: 4 (lower is better)
Translates to: CLRGSGPGIVVVWSWNQVCSISP*VARVQI
Trigger: GATCTGGACCCTGGCCACCCATGGGCTGATGGAGCA...TACCTGGTTCCAACTCCAGACAACCACTATGCCAGGCCCGGAGCCTCTGAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp TGGCGAGAAACAGCAGAAGGCCATGGAAAGCCCCAGCAGGCCTTCTTCCCTCTCCCTTCCCTGGGGGTGTaGGAGCTTTGTCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: WRETAEGHGKPQQAFFPLPSLGV*ELCLRA
Trigger: TGCCCTCAGACAAAGCTCCCACACCCCCAGGGAAGG...GAGAGGGAAGAAGGCCTGCTGGGGCTTTCCATGGCCTTCTGCTGTTTCTCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp TGCCTCAGAGGCTCCGGGCCTGGCATAGTGGTTGTCTGGAGTTGGAACCAGGTACAGAGGCTCCGGGCCTaGCATAGTGGTTGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: CLRGSGPGIVVVWSWNQVQRLRA*HSGCLE
Trigger: CTCCAGACAACCACTATGCCAGGCCCGGAGCCTCTG...TACCTGGTTCCAACTCCAGACAACCACTATGCCAGGCCCGGAGCCTCTGAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR TCA 90 bp CCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGGCTCTCGGCAACCATGGCGGCTGTCGGCCTaGGAAAAGGGTCTGGTAGGC +
Preference number: 4 (lower is better)
Translates to: PPEHFWQILALAQGSRQPWRLSA*EKGLVG
Trigger: GCCTACCAGACCCTTTTCTCAGGCCGACAGCCGCCA...TGGTTGCCGAGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR TCA 90 bp ACCTCAGATGAGGGCCTGGACTGGCCGATGCCTCAGAGGCTCCGGGCCTGGCATAGACACATTCACCACTaGGAAGAAGATGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: TSDEGLDWPMPQRLRAWHRHIHH*EEDEQL
Trigger: GAGCTGCTCATCTTCTTCTCAGTGGTGAATGTGTCT...ATGCCAGGCCCGGAGCCTCTGAGGCATCGGCCAGTCCAGGCCCTCATCTGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR TCA 90 bp CCTGCATTTGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGCATGGGCATCACACTaGCGCGCACCTGGGGCACTC +
Preference number: 4 (lower is better)
Translates to: PAFAGPPEHFWQILALAQAWASH*RAPGAL
Trigger: GAGTGCCCCAGGTGCGCGTCAGTGTGATGCCCATGC...CTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCAAATGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR TCA 90 bp TGGCAAATCCTTGCCTTGGCTCAGGGCTCTCGGCAACCAGTTTCAGATGTGAGGTGTGGGAGCTTTGTCTaGGGGCAGGGGGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: WQILALAQGSRQPVSDVRCGSFV*GQGAVH
Trigger: GTGGACAGCCCCCTGCCCTCAGACAAAGCTCCCACA...CCTCACATCTGAAACTGGTTGCCGAGAGCCCTGAGCCAAGGCAAGGATTTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR GCA 90 bp GCGAGCCTGGGCTTGGCTGCCCACTCAAGTGGTCCTGTAGAAAATACCTGGGAGTCGCAAGGGGACTGGTaGCTCGTTCTGTACCCGAGT +
Preference number: 4 (lower is better)
Translates to: ASLGLAAHSSGPVENTWESQGDW*LVLYPS
Trigger: ACTCGGGTACAGAACGAGGCACCAGTCCCCTTGCGA...CTCCCAGGTATTTTCTACAGGACCACTTGAGTGGGCAGCCAAGCCCAGGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR GCA 90 bp TCAGGGCTCTCGGCAACCAGTTTCAGATGTGAGGGCCGGCCCAGGAGCTGTGGCCTTCATCATCATCCATaGTGGGCCAGATGGACTGGT +
Preference number: 4 (lower is better)
Translates to: SGLSATSFRCEGRPRSCGLHHHP*WARWTG
Trigger: ACCAGTCCATCTGGCCCAGCATGGATGATGATGAAG...GCCACAGCTCCTGGGCCGGCCCTCACATCTGAAACTGGTTGCCGAGAGCCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR GCA 90 bp TGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGGCTCTCGGTCCCTGCAGCCACTTaGTTGGGGCTGCCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: CWAPRTFLANPCLGSGLSVPAAT*LGLPAD
Trigger: ATCAGCTGGCAGCCCCAAGCAAGTGGCTGCAGGGAC...CGAGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR GCA 90 bp CTGGGAGCTGGAGCTGTTCTGGTCCAGAAGCAGTCACCGCCACAGCAGAGGGAAGTCGGCTCCTGCATTTaGTGGGCCCCCAGAACATTT +
Preference number: 4 (lower is better)
Translates to: LGAGAVLVQKQSPPQQREVGSCI*WAPRTF
Trigger: AAATGTTCTGGGGGCCCAGCAAATGCAGGAGCCGAC...TTCCCTCTGCTGTGGCGGTGACTGCTTCTGGACCAGAACAGCTCCAGCTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR GCA 90 bp TGCATTTGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGGGGATGGGCAGGGATGTaGAGCCCCAGGTCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: CICWAPRTFLANPCLGSGGWAGM*SPRSAP
Trigger: AGGAGCCGACCTGGGGCTGCACATCCCTGCCCATCC...CCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCAAATGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR GCA 90 bp TGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGGCTCTCGGAGCCTGGGCTTGGCTaGCCACTCAAGTGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: CWAPRTFLANPCLGSGLSEPGLG*PLKWSC
Trigger: ACAGGACCACTTGAGTGGGCAGCCAAGCCCAGGCTC...CGAGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp TGCCCACTCAAGTGGTCCTGTAGAAAATACCTGGGAGCTGGAGCTGTTCTGGTCGTGCTGGCGGGCGCCTaGCAGGGCACGTTGCATCTT +
Preference number: 4 (lower is better)
Translates to: CPLKWSCRKYLGAGAVLVVLAGA*QGTLHL
Trigger: AAGATGCAACGTGCCCTGCCAGGCGCCCGCCAGCAC...GACCAGAACAGCTCCAGCTCCCAGGTATTTTCTACAGGACCACTTGAGTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp TTTGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGGCTCTCCTTCACCACCACGCTaGCGCTGGCCAGAATGGCCC +
Preference number: 4 (lower is better)
Translates to: FAGPPEHFWQILALAQGSPSPPR*RWPEWP
Trigger: GGGCCATTCTGGCCAGCGCCAGCGTGGTGGTGAAGG...AGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp GCGAGCCTGGGCTTGGCTGCCCACTCAAGTGGTCCTGTAGAAAATACCTGGGAGAAGCCCAAGGCGCCGTaGATACGGACAGTGAACAGG +
Preference number: 4 (lower is better)
Translates to: ASLGLAAHSSGPVENTWEKPKAP*IRTVNR
Trigger: CCTGTTCACTGTCCGTATCCACGGCGCCTTGGGCTT...CTCCCAGGTATTTTCTACAGGACCACTTGAGTGGGCAGCCAAGCCCAGGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp GGGAGCTGGAGCTGTTCTGGTCCAGAAGCAGTCACCGCCACAGCAGAGGGAAACCCATGCTGGGCCAGATaGACTGGTCTTCCACTCTCT +
Preference number: 4 (lower is better)
Translates to: GSWSCSGPEAVTATAEGNPCWAR*TGLPLS
Trigger: AGAGAGTGGAAGACCAGTCCATCTGGCCCAGCATGG...GTTTCCCTCTGCTGTGGCGGTGACTGCTTCTGGACCAGAACAGCTCCAGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp GCAAATCCTTGCCTTGGCTCAGGGCTCTCGGCAACCAGTTTCAGATGTGAGGGCCCTCAGATGAGGGCCTaGACTGGCCGATGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: ANPCLGSGLSATSFRCEGPQMRA*TGRCLR
Trigger: TCTGAGGCATCGGCCAGTCCAGGCCCTCATCTGAGG...GCCCTCACATCTGAAACTGGTTGCCGAGAGCCCTGAGCCAAGGCAAGGATTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR TCA 90 bp TGGCAAATCCTTGCCTTGGCTCAGGGCTCTCGGCAACCAGTTTCAGATGTGAGGCCACCGTTGTCAGGCTaGTGGCCACGTCCCACACAT +
Preference number: 4 (lower is better)
Translates to: WQILALAQGSRQPVSDVRPPLSG*WPRPTH
Trigger: ATGTGTGGGACGTGGCCATCAGCCTGACAACGGTGG...CCTCACATCTGAAACTGGTTGCCGAGAGCCCTGAGCCAAGGCAAGGATTTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR TCA 90 bp CAAGAGTCCTGGGTAGTGTTGGCGAGAAACAGCAGAAGGCCATGGAAAGCCCCAAGGAAGCCATGTAGGTaGGGAGGTAGGCGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: QESWVVLARNSRRPWKAPRKPCR*GGRRRP
Trigger: GGGCCTTCGCCTACCTCCTCACCTACATGGCTTCCT...TGGGGCTTTCCATGGCCTTCTGCTGTTTCTCGCCAACACTACCCAGGACTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR GCA 90 bp TGCATTTGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGGGCCTCCTCCATCCACTaGGAGGCCCTTCGGTTCGCA +
Preference number: 4 (lower is better)
Translates to: CICWAPRTFLANPCLGSGASSIH*EALRFA
Trigger: TGCGAACCGAAGGGCCTCGCAGTGGATGGAGGAGGC...CCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCAAATGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR GCA 90 bp GCAAATCCTTGCCTTGGCTCAGGGCTCTCGGCAACCAGTTTCAGATGTGAGGGCACGTCCCACACATGCTaGTCCATCAGCCCATGGGTG +
Preference number: 4 (lower is better)
Translates to: ANPCLGSGLSATSFRCEGTSHTC*SISPWV
Trigger: CACCCATGGGCTGATGGAGCAGCATGTGTGGGACGT...GCCCTCACATCTGAAACTGGTTGCCGAGAGCCCTGAGCCAAGGCAAGGATTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR GCA 90 bp GCTGGAGCTGTTCTGGTCCAGAAGCAGTCACCGCCACAGCAGAGGGAAACAAATGCCACGTCCCACACATaGTGCTCCATCAGCCCATGG +
Preference number: 4 (lower is better)
Translates to: AGAVLVQKQSPPQQRETNATSHT*CSISPW
Trigger: CCATGGGCTGATGGAGCAGCATGTGTGGGACGTGGC...ATTTGTTTCCCTCTGCTGTGGCGGTGACTGCTTCTGGACCAGAACAGCTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp CACCGCCACAGCAGAGGGAAACAAATCCTGACAGGAACAGTCTTTCTGGGGATGTACCCGAGTCAAGCCTaGTCAGCTCCCGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: HRHSRGKQILTGTVFLGMYPSQA*SAPARP
Trigger: AGGCCGAGCGGGAGCTGACCAGGCTTGACTCGGGTA...CATCCCCAGAAAGACTGTTCCTGTCAGGATTTGTTTCCCTCTGCTGTGGCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp TGGCAAATCCTTGCCTTGGCTCAGGGCTCTCGGCAACCAGTTTCAGATGTGAGGGGTTCGCAAGGGGACTaGTGCCTCGTTCTGTACCCG +
Preference number: 4 (lower is better)
Translates to: WQILALAQGSRQPVSDVRGSQGD*CLVLYP
Trigger: CGGGTACAGAACGAGGCACCAGTCCCCTTGCGAACC...CCTCACATCTGAAACTGGTTGCCGAGAGCCCTGAGCCAAGGCAAGGATTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp CAAGAGTCCTGGGTAGTGTTGGCGAGAAACAGCAGAAGGCCATGGAAAGCCCCAGGGGGCTGTCCACCTTaGCCCCAGACTCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: QESWVVLARNSRRPWKAPGGCPP*PQTPLH
Trigger: ATGAAGAGGAGTCTGGGGCCAAGGTGGACAGCCCCC...TGGGGCTTTCCATGGCCTTCTGCTGTTTCTCGCCAACACTACCCAGGACTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp GTGTTGGCGAGAAACAGCAGAAGGCCATGGAAAGCCCCAGCAGGCCTTCTTCCCGTGCCACACTCAAGGTaGTCTGGAGTTACAGCGTCG +
Preference number: 4 (lower is better)
Translates to: VLARNSRRPWKAPAGLLPVPHSR*SGVTAS
Trigger: CGACGCTGTAACTCCAGACCACCTTGAGTGTGGCAC...GGGAAGAAGGCCTGCTGGGGCTTTCCATGGCCTTCTGCTGTTTCTCGCCAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp TGCCCACTCAAGTGGTCCTGTAGAAAATACCTGGGAGCTGGAGCTGTTCTGGTCCTGCGAGCCTGGGCTTaGCTGCCCACTCAAGTGGTC +
Preference number: 4 (lower is better)
Translates to: CPLKWSCRKYLGAGAVLVLRAWA*LPTQVV
Trigger: GACCACTTGAGTGGGCAGCCAAGCCCAGGCTCGCAG...GACCAGAACAGCTCCAGCTCCCAGGTATTTTCTACAGGACCACTTGAGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp GTGTTGGCGAGAAACAGCAGAAGGCCATGGAAAGCCCCAGCAGGCCTTCTTCCCTTGATACTGCGAGCCTaGGCTTGGCTGCCCACTCAA +
Preference number: 4 (lower is better)
Translates to: VLARNSRRPWKAPAGLLPLILRA*AWLPTQ
Trigger: TTGAGTGGGCAGCCAAGCCCAGGCTCGCAGTATCAA...GGGAAGAAGGCCTGCTGGGGCTTTCCATGGCCTTCTGCTGTTTCTCGCCAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR CAA 72 bp GTCGGCTCCTGCATTTGCTGGGCCCCCAGAACATTTTaGGCAAATCCTTGCCTTGGCTCAGGGCTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: VGSCICWAPRTF*ANPCLGSGLSA
Trigger: TGCCGAGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCAAATGCAGGAGCCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR TCA 90 bp TGCATTTGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGGAACCAGTTTCAGATGTaGGGGCCGGCCCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: CICWAPRTFLANPCLGSGNQFQM*GPAQEL
Trigger: CAGCTCCTGGGCCGGCCCTCACATCTGAAACTGGTT...CCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCAAATGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR GCA 90 bp GCTGGAGCTGTTCTGGTCCAGAAGCAGTCACCGCCACAGCAGAGGGAAACAAATCAGCCGCTCATTGAGTaGCTTCAGGGCCAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: AGAVLVQKQSPPQQRETNQPLIE*LQGQLP
Trigger: AGGCAACTGGCCCTGAAGGCACTCAATGAGCGGCTG...ATTTGTTTCCCTCTGCTGTGGCGGTGACTGCTTCTGGACCAGAACAGCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp TTTATTGATACTGCGAGCCTGGGCTTGGCTGCCCACTCAAGTGGTCCTGTAGAACGTGCCAGGCTAGCCTaGTTGGCGTTGACCTCAGGG +
Preference number: 4 (lower is better)
Translates to: FIDTASLGLAAHSSGPVERARLA*LALTSG
Trigger: CCCTGAGGTCAACGCCAACCAGGCTAGCCTGGCACG...TTCTACAGGACCACTTGAGTGGGCAGCCAAGCCCAGGCTCGCAGTATCAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp GCGAGCCTGGGCTTGGCTGCCCACTCAAGTGGTCCTGTAGAAAATACCTGGGAGTCCAGATCCAGAAGTTaGGAGGAAAGAGGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: ASLGLAAHSSGPVENTWESRSRS*EERGSP
Trigger: CGGGCTACCTCTTTCCTCCCAACTTCTGGATCTGGA...CTCCCAGGTATTTTCTACAGGACCACTTGAGTGGGCAGCCAAGCCCAGGCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp TCAAGTGGTCCTGTAGAAAATACCTGGGAGCTGGAGCTGTTCTGGTCCAGAAGCACACTGACGCGCACCTaGGGCACTCGCAGGACCACA +
Preference number: 4 (lower is better)
Translates to: SSGPVENTWELELFWSRSTLTRT*GTRRTT
Trigger: TGTGGTCCTGCGAGTGCCCCAGGTGCGCGTCAGTGT...GCTTCTGGACCAGAACAGCTCCAGCTCCCAGGTATTTTCTACAGGACCACTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp CTGGGAGCTGGAGCTGTTCTGGTCCAGAAGCAGTCACCGCCACAGCAGAGGGAAGTGGTTGTCTGGAGTTaGAACCAGGTAGCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: LGAGAVLVQKQSPPQQREVVVWS*NQVARV
Trigger: GACTCTTGCTACCTGGTTCCAACTCCAGACAACCAC...TTCCCTCTGCTGTGGCGGTGACTGCTTCTGGACCAGAACAGCTCCAGCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR GCA 90 bp TTTGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGGCTCTCAGTCCCCCATGGTTTaGTTGAGTGCCACCAGGACG +
Preference number: 4 (lower is better)
Translates to: FAGPPEHFWQILALAQGSQSPMV*LSATRT
Trigger: CGTCCTGGTGGCACTCAAGCAAACCATGGGGGACTG...AGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR GCA 90 bp GTGTTGGCGAGAAACAGCAGAAGGCCATGGAAAGCCCCAGCAGGCCTTCTTCCCCCACTTGCTTGGGGCTaGCAGCTGATGTACATTCTT +
Preference number: 4 (lower is better)
Translates to: VLARNSRRPWKAPAGLLPPLAWG*QLMYIL
Trigger: AAGAATGTACATCAGCTGGCAGCCCCAAGCAAGTGG...GGGAAGAAGGCCTGCTGGGGCTTTCCATGGCCTTCTGCTGTTTCTCGCCAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp GTGTTGGCGAGAAACAGCAGAAGGCCATGGAAAGCCCCAGCAGGCCTTCTTCCCGAAGATATACCCAACTaGAGAGCAGCCCGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: VLARNSRRPWKAPAGLLPEDIPN*RAARSH
Trigger: ATGGCTTCGGGCTGCTCTCCAGTTGGGTATATCTTC...GGGAAGAAGGCCTGCTGGGGCTTTCCATGGCCTTCTGCTGTTTCTCGCCAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp TGGCGAGAAACAGCAGAAGGCCATGGAAAGCCCCAGCAGGCCTTCTTCCCTCTCGGCATAGTGGTTGTCTaGAGTTGGAACCAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: WRETAEGHGKPQQAFFPLGIVVV*SWNQVA
Trigger: TGCTACCTGGTTCCAACTCCAGACAACCACTATGCC...GAGAGGGAAGAAGGCCTGCTGGGGCTTTCCATGGCCTTCTGCTGTTTCTCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp CACCGCCACAGCAGAGGGAAACAAATCCTGACAGGAACAGTCTTTCTGGGGATGGAGCTGGAGCTGTTCTaGTCCAGAAGCAGTCACCGC +
Preference number: 4 (lower is better)
Translates to: HRHSRGKQILTGTVFLGMELELF*SRSSHR
Trigger: GCGGTGACTGCTTCTGGACCAGAACAGCTCCAGCTC...CATCCCCAGAAAGACTGTTCCTGTCAGGATTTGTTTCCCTCTGCTGTGGCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR CAA 72 bp AGGAGCTGTGGCATCAGTGTCCCTGCAGCCACTTGCTaGGGGCTGCCAGCTGATGTACATTCTTACCTCAGA +
Preference number: 4 (lower is better)
Translates to: RSCGISVPAATC*GLPADVHSYLR
Trigger: TCTGAGGTAAGAATGTACATCAGCTGGCAGCCCCAAGCAAGTGGCTGCAGGGACACTGATGCCACAGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR CAA 72 bp GCTGGGCCCCCAGAACATTTTTGGCAAATCCTTGCCTaGGCTCAGGGCTCTCGGCAACCAGTTTCAGATGTG +
Preference number: 4 (lower is better)
Translates to: AGPPEHFWQILA*AQGSRQPVSDV
Trigger: CACATCTGAAACTGGTTGCCGAGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR TCA 90 bp CCTGCATTTGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGTCTTCAGCCGCTCATTaGGTGCCTTCAGGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: PAFAGPPEHFWQILALAQSSAAH*VPSGPV
Trigger: AACTGGCCCTGAAGGCACTCAATGAGCGGCTGAAGA...CTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCAAATGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR TCA 90 bp CCTGCATTTGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGAGCTGCCTCGAAGGTaGTTAGACTGGATTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PAFAGPPEHFWQILALAQELPRR*LDWILG
Trigger: CCCCAGAATCCAGTCTAATCACCTTCGAGGCAGCTC...CTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCAAATGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR GCA 90 bp TCAAGTGGTCCTGTAGAAAATACCTGGGAGCTGGAGCTGTTCTGGTCCAGAAGCTGGCATCAGTGTCCCTaGAGCCACTTGCTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SSGPVENTWELELFWSRSWHQCP*SHLLGA
Trigger: AGCCCCAAGCAAGTGGCTGCAGGGACACTGATGCCA...GCTTCTGGACCAGAACAGCTCCAGCTCCCAGGTATTTTCTACAGGACCACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp TGCCTCAGAGGCTCCGGGCCTGGCATAGTGGTTGTCTGGAGTTGGAACCAGGTATCTCAGGGAAGAAAGTaGCGAAAGCAAAGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: CLRGSGPGIVVVWSWNQVSQGRK*RKQSGQ
Trigger: CTGACCACTTTGCTTTCGCCACTTTCTTCCCTGAGA...TACCTGGTTCCAACTCCAGACAACCACTATGCCAGGCCCGGAGCCTCTGAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp CCTGCATTTGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGCTGGGCCAGATGGACTaGTCTTCCACTCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PAFAGPPEHFWQILALAQLGQMD*SSTLFS
Trigger: GCTGAAGAGAGTGGAAGACCAGTCCATCTGGCCCAG...CTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCAAATGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp TGCCCACTCAAGTGGTCCTGTAGAAAATACCTGGGAGCTGGAGCTGTTCTGGTCAACAGCAGAAGGCCATaGAAAGCCCCAGCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: CPLKWSCRKYLGAGAVLVNSRRP*KAPAGL
Trigger: AAGGCCTGCTGGGGCTTTCCATGGCCTTCTGCTGTT...GACCAGAACAGCTCCAGCTCCCAGGTATTTTCTACAGGACCACTTGAGTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp CCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGGCTCTCGGCAACCAGGCTCCTGCATTTGCTaGGCCCCCAGAACATTTTTG +
Preference number: 4 (lower is better)
Translates to: PPEHFWQILALAQGSRQPGSCIC*APRTFL
Trigger: CAAAAATGTTCTGGGGGCCCAGCAAATGCAGGAGCC...TGGTTGCCGAGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000266025.4
3UTR CAA 72 bp CATTTGCTGGGCCCCCAGAACATTTTTGGCAAATCCTaGCCTTGGCTCAGGGCTCTCGGCAACCAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: HLLGPQNIFGKS*PWLRALGNQFQ
Trigger: CTGAAACTGGTTGCCGAGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp GCAAATCCTTGCCTTGGCTCAGGGCTCTCGGCAACCAGTTTCAGATGTGAGGGCCGCTTCACCGTCTTCTaGCATATCTTTACCTTCACC +
Preference number: 4 (lower is better)
Translates to: ANPCLGSGLSATSFRCEGRFTVF*HIFTFT
Trigger: GGTGAAGGTAAAGATATGCCAGAAGACGGTGAAGCG...GCCCTCACATCTGAAACTGGTTGCCGAGAGCCCTGAGCCAAGGCAAGGATTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR TCA 90 bp CCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGGCTCTCGGCAACCAAGAGAACTGCTTTATTaGTACTGCGAGCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PPEHFWQILALAQGSRQPRELLY*YCEPGL
Trigger: AAGCCCAGGCTCGCAGTATCAATAAAGCAGTTCTCT...TGGTTGCCGAGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp CAAGAGTCCTGGGTAGTGTTGGCGAGAAACAGCAGAAGGCCATGGAAAGCCCCAAAAATACCTGGGAGCTaGAGCTGTTCTGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: QESWVVLARNSRRPWKAPKIPGS*SCSGPE
Trigger: TTCTGGACCAGAACAGCTCCAGCTCCCAGGTATTTT...TGGGGCTTTCCATGGCCTTCTGCTGTTTCTCGCCAACACTACCCAGGACTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp TTTGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGGCTCTGGCTGCCCACTCAAGTaGTCCTGTAGAAAATACCTG +
Preference number: 4 (lower is better)
Translates to: FAGPPEHFWQILALAQGSGCPLK*SCRKYL
Trigger: CAGGTATTTTCTACAGGACCACTTGAGTGGGCAGCC...AGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR GCA 90 bp TTTATTGATACTGCGAGCCTGGGCTTGGCTGCCCACTCAAGTGGTCCTGTAGAATTTTTGGCAAATCCTTaGCTTGGCTCAGGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: FIDTASLGLAAHSSGPVEFLANP*LGSGLS
Trigger: CGAGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAA...TTCTACAGGACCACTTGAGTGGGCAGCCAAGCCCAGGCTCGCAGTATCAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CCA 90 bp TTTATTGATACTGCGAGCCTGGGCTTGGCTGCCCACTCAAGTGGTCCTGTAGAACATCATCATCCATGCTaGGCCAGATGGACTGGTCTT +
Preference number: 4 (lower is better)
Translates to: FIDTASLGLAAHSSGPVEHHHPC*ARWTGL
Trigger: AAGACCAGTCCATCTGGCCCAGCATGGATGATGATG...TTCTACAGGACCACTTGAGTGGGCAGCCAAGCCCAGGCTCGCAGTATCAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR GCA 90 bp CCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGGCTCTCGGCAACCACATTCCTCAGAGAACTaGTTTATTGATACTGCGAGC +
Preference number: 4 (lower is better)
Translates to: PPEHFWQILALAQGSRQPHSSEN*FIDTAS
Trigger: GCTCGCAGTATCAATAAAGCAGTTCTCTGAGGAATG...TGGTTGCCGAGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS TCA 90 bp CGGGCCTTGTTGCCGGGCCGCAGCGTAGGCCCCTCGCCCGGGACCTaGGGGAAGGCCCTGGACGGCTGCGGCACGCCCGCCTACCCACCC +
Preference number: 5 (lower is better)
Translates to: RALLPGRSVGPSPGT*GKALDGCGTPAYPP
Trigger: GGGTGGGTAGGCGGGCGTGCCGCAGCCGTCCAGGGCCTTCCCTCAGGTCCCGGGCGAGGGGCCTACGCTGCGGCCCGGCAACAAGGCCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 90 bp GCAGCCCGAAGCCATAGGAAGCCAGCGCCGGGCTCTGGAGCAGCGTaGCGAGCCGCAGCAGGAGCAGCAGCGCCAGCAGCAGCATGGGCA +
Preference number: 5 (lower is better)
Translates to: AARSHRKPAPGSGAA*RAAAGAAAPAAAWA
Trigger: TGCCCATGCTGCTGCTGGCGCTGCTGCTCCTGCTGCGGCTCGCCACGCTGCTCCAGAGCCCGGCGCTGGCTTCCTATGGCTTCGGGCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 90 bp GGCACGCCCGCCTACCCACCCTGTAGGCCCCGTGCCAGGCTAGCCTaGTTGGCGTTGACCTCAGGGCTGGGCCTCCTCCATCCACTGCGA +
Preference number: 5 (lower is better)
Translates to: GTPAYPPCRPRARLA*LALTSGLGLLHPLR
Trigger: TCGCAGTGGATGGAGGAGGCCCAGCCCTGAGGTCAACGCCAACCAGGCTAGCCTGGCACGGGGCCTACAGGGTGGGTAGGCGGGCGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 90 bp GCCTATGGCCCTGGTAAAGGATCCGCTTCCGATCGGGTGGGGCTCTaGTCCCGAGGGGCCGAGTCGGGCCTTGTTGCCGGGCCGCAGCGT +
Preference number: 5 (lower is better)
Translates to: AYGPGKGSASDRVGL*SRGAESGLVAGPQR
Trigger: ACGCTGCGGCCCGGCAACAAGGCCCGACTCGGCCCCTCGGGACCAGAGCCCCACCCGATCGGAAGCGGATCCTTTACCAGGGCCATAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 90 bp GCCTTCACCACCACGCTGGCGCTGGCCAGAATGGCCCCCAAGTGCTaGCGGGCGCCTGGCAGGGCACGTTGCATCTTCCTGGCGGCTGTC +
Preference number: 5 (lower is better)
Translates to: AFTTTLALARMAPKC*RAPGRARCIFLAAV
Trigger: GACAGCCGCCAGGAAGATGCAACGTGCCCTGCCAGGCGCCCGCCAGCACTTGGGGGCCATTCTGGCCAGCGCCAGCGTGGTGGTGAAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS GCA 90 bp AGAGCCTTCACCACCACGCTGGCGCTGGCCAGAATGGCCCCCAAGTaGTGGCGGGCGCCTGGCAGGGCACGTTGCATCTTCCTGGCGGCT +
Preference number: 5 (lower is better)
Translates to: RAFTTTLALARMAPK*WRAPGRARCIFLAA
Trigger: AGCCGCCAGGAAGATGCAACGTGCCCTGCCAGGCGCCCGCCAGCACTTGGGGGCCATTCTGGCCAGCGCCAGCGTGGTGGTGAAGGCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 90 bp CACGCTGGCGCTGGCCAGAATGGCCCCCAAGTGCTGGCGGGCGCCTaGCAGGGCACGTTGCATCTTCCTGGCGGCTGTCGGCCTGAGAAA +
Preference number: 5 (lower is better)
Translates to: HAGAGQNGPQVLAGA*QGTLHLPGGCRPEK
Trigger: TTTCTCAGGCCGACAGCCGCCAGGAAGATGCAACGTGCCCTGCCAGGCGCCCGCCAGCACTTGGGGGCCATTCTGGCCAGCGCCAGCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 90 bp GGAATAGTACCGCCGCACACAGAGCCTTCACCACCACGCTGGCGCTaGCCAGAATGGCCCCCAAGTGCTGGCGGGCGCCTGGCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: GIVPPHTEPSPPRWR*PEWPPSAGGRLAGH
Trigger: GTGCCCTGCCAGGCGCCCGCCAGCACTTGGGGGCCATTCTGGCCAGCGCCAGCGTGGTGGTGAAGGCTCTGTGTGCGGCGGTACTATTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 90 bp AGTCACTGGCCTATGGCCCTGGTAAAGGATCCGCTTCCGATCGGGTaGGGCTCTGGTCCCGAGGGGCCGAGTCGGGCCTTGTTGCCGGGC +
Preference number: 5 (lower is better)
Translates to: SHWPMALVKDPLPIG*GSGPEGPSRALLPG
Trigger: GCCCGGCAACAAGGCCCGACTCGGCCCCTCGGGACCAGAGCCCCACCCGATCGGAAGCGGATCCTTTACCAGGGCCATAGGCCAGTGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS GCA 90 bp GCCAGAATGGCCCCCAAGTGCTGGCGGGCGCCTGGCAGGGCACGTTaGATCTTCCTGGCGGCTGTCGGCCTGAGAAAAGGGTCTGGTAGG +
Preference number: 5 (lower is better)
Translates to: ARMAPKCWRAPGRAR*IFLAAVGLRKGSGR
Trigger: CCTACCAGACCCTTTTCTCAGGCCGACAGCCGCCAGGAAGATGCAACGTGCCCTGCCAGGCGCCCGCCAGCACTTGGGGGCCATTCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 90 bp GGTAGAGGAATAGTACCGCCGCACACAGAGCCTTCACCACCACGCTaGCGCTGGCCAGAATGGCCCCCAAGTGCTGGCGGGCGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: GRGIVPPHTEPSPPR*RWPEWPPSAGGRLA
Trigger: TGCCAGGCGCCCGCCAGCACTTGGGGGCCATTCTGGCCAGCGCCAGCGTGGTGGTGAAGGCTCTGTGTGCGGCGGTACTATTCCTCTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CAA 90 bp TTACCTCAGATGAGGGCCTGGACTGGCCGATGCCTCAGAGGCTCCGGGCCTGGCTCTCCGCTCGGCGTCTaGAGGGTCTGTGCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: LPQMRAWTGRCLRGSGPGSPLGV*RVCAWQ
Trigger: CTGCCAGGCACAGACCCTCAAGACGCCGAGCGGAGA...GCCAGGCCCGGAGCCTCTGAGGCATCGGCCAGTCCAGGCCCTCATCTGAGGTAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS TCA 90 bp AGAGGGGCTCCAGCAAACGCCCGGCCACCACCACCGTTGTCAGGCTaGTGGCCACGTCCCACACATGCTGCTCCATCAGCCCATGGGTGG +
Preference number: 5 (lower is better)
Translates to: RGAPANARPPPPLSG*WPRPTHAAPSAHGW
Trigger: CCACCCATGGGCTGATGGAGCAGCATGTGTGGGACGTGGCCATCAGCCTGACAACGGTGGTGGTGGCCGGGCGTTTGCTGGAGCCCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS GCA 90 bp CCTCCTCCATCCACTGCGAGGCCCTTCGGTTCGCAAGGGGACTGGTaGCTCGTTCTGTACCCGAGTCAAGCCTGGTCAGCTCCCGCTCGG +
Preference number: 5 (lower is better)
Translates to: PPPSTARPFGSQGDW*LVLYPSQAWSAPAR
Trigger: CCGAGCGGGAGCTGACCAGGCTTGACTCGGGTACAGAACGAGGCACCAGTCCCCTTGCGAACCGAAGGGCCTCGCAGTGGATGGAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 90 bp GGTTCGCAAGGGGACTGGTGCCTCGTTCTGTACCCGAGTCAAGCCTaGTCAGCTCCCGCTCGGCCTGGCTCCTGGCTTCGACCGTACCTC +
Preference number: 5 (lower is better)
Translates to: GSQGDWCLVLYPSQA*SAPARPGSWLRPYL
Trigger: GAGGTACGGTCGAAGCCAGGAGCCAGGCCGAGCGGGAGCTGACCAGGCTTGACTCGGGTACAGAACGAGGCACCAGTCCCCTTGCGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 90 bp GGGCCTCCTCCATCCACTGCGAGGCCCTTCGGTTCGCAAGGGGACTaGTGCCTCGTTCTGTACCCGAGTCAAGCCTGGTCAGCTCCCGCT +
Preference number: 5 (lower is better)
Translates to: GPPPSTARPFGSQGD*CLVLYPSQAWSAPA
Trigger: AGCGGGAGCTGACCAGGCTTGACTCGGGTACAGAACGAGGCACCAGTCCCCTTGCGAACCGAAGGGCCTCGCAGTGGATGGAGGAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS GCA 90 bp CCGGCCACCACCACCGTTGTCAGGCTGATGGCCACGTCCCACACATaGTGCTCCATCAGCCCATGGGTGGCCAGGGTCCAGATCCAGAAG +
Preference number: 5 (lower is better)
Translates to: PATTTVVRLMATSHT*CSISPWVARVQIQK
Trigger: CTTCTGGATCTGGACCCTGGCCACCCATGGGCTGATGGAGCAGCATGTGTGGGACGTGGCCATCAGCCTGACAACGGTGGTGGTGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS TCA 90 bp CCAGGGTCCAGATCCAGAAGTTGGGAGGAAAGAGGTAGCCCGGGGTaGCCGCCAGGCAGCCTGTGTCCACGGCGAAGGAGAGCAGGTAGA +
Preference number: 5 (lower is better)
Translates to: PGSRSRSWEERGSPG*PPGSLCPRRRRAGR
Trigger: TCTACCTGCTCTCCTTCGCCGTGGACACAGGCTGCCTGGCGGTCACCCCGGGCTACCTCTTTCCTCCCAACTTCTGGATCTGGACCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 90 bp CTCGGCCCCGGCTATGGCGCTGGTAGAAGCGAAGATATACCCAACTaGAGAGCAGCCCGAAGCCATAGGAAGCCAGCGCCGGGCTCTGGA +
Preference number: 5 (lower is better)
Translates to: LGPGYGAGRSEDIPN*RAARSHRKPAPGSG
Trigger: TCCAGAGCCCGGCGCTGGCTTCCTATGGCTTCGGGCTGCTCTCCAGTTGGGTATATCTTCGCTTCTACCAGCGCCATAGCCGGGGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CAA 90 bp TGGCAAATCCTTGCCTTGGCTCAGGGCTCTCGGCAACCAGTTTCAGATGTGAGGGGGCCGAGTCGGGCCTaGTTGCCGGGCCGCAGCGTA +
Preference number: 5 (lower is better)
Translates to: WQILALAQGSRQPVSDVRGPSRA*LPGRSV
Trigger: TACGCTGCGGCCCGGCAACAAGGCCCGACTCGGCCC...CCTCACATCTGAAACTGGTTGCCGAGAGCCCTGAGCCAAGGCAAGGATTTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CAA 90 bp CTGGGAGCTGGAGCTGTTCTGGTCCAGAAGCAGTCACCGCCACAGCAGAGGGAATGCCTTCAGGGCCAGTaGCCTTCTCCGCTCGGCGTC +
Preference number: 5 (lower is better)
Translates to: LGAGAVLVQKQSPPQQRECLQGQ*PSPLGV
Trigger: GACGCCGAGCGGAGAAGGCAACTGGCCCTGAAGGCA...TTCCCTCTGCTGTGGCGGTGACTGCTTCTGGACCAGAACAGCTCCAGCTCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS GCA 90 bp GCCACCACCACCGTTGTCAGGCTGATGGCCACGTCCCACACATGCTaGTCCATCAGCCCATGGGTGGCCAGGGTCCAGATCCAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: ATTTVVRLMATSHTC*SISPWVARVQIQKL
Trigger: CAACTTCTGGATCTGGACCCTGGCCACCCATGGGCTGATGGAGCAGCATGTGTGGGACGTGGCCATCAGCCTGACAACGGTGGTGGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CAA 90 bp GTGTTGGCGAGAAACAGCAGAAGGCCATGGAAAGCCCCAGCAGGCCTTCTTCCCCTAGCCTGGTTGGCGTaGACCTCAGGGCTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: VLARNSRRPWKAPAGLLPLAWLA*TSGLGL
Trigger: GAGGCCCAGCCCTGAGGTCAACGCCAACCAGGCTAG...GGGAAGAAGGCCTGCTGGGGCTTTCCATGGCCTTCTGCTGTTTCTCGCCAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CAA 90 bp GGAGCTGGAGCTGTTCTGGTCCAGAAGCAGTCACCGCCACAGCAGAGGGAAACAGCCAGGCTAGCCTGGTaGGCGTTGACCTCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: GAGAVLVQKQSPPQQRETARLAW*ALTSGL
Trigger: CAGCCCTGAGGTCAACGCCAACCAGGCTAGCCTGGC...TGTTTCCCTCTGCTGTGGCGGTGACTGCTTCTGGACCAGAACAGCTCCAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CAA 90 bp CCTGCATTTGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGCCGAGTCGGGCCTTGTaGCCGGGCCGCAGCGTAGGC +
Preference number: 5 (lower is better)
Translates to: PAFAGPPEHFWQILALAQPSRAL*PGRSVG
Trigger: GCCTACGCTGCGGCCCGGCAACAAGGCCCGACTCGG...CTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCAAATGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS TCA 90 bp TGCTGGGCCAGATGGACTGGTCTTCCACTCTCTTCAGCCGCTCATTaGGTGCCTTCAGGGCCAGTTGCCTTCTCCGCTCGGCGTCTTGAG +
Preference number: 5 (lower is better)
Translates to: CWARWTGLPLSSAAH*VPSGPVAFSARRLE
Trigger: CTCAAGACGCCGAGCGGAGAAGGCAACTGGCCCTGAAGGCACTCAATGAGCGGCTGAAGAGAGTGGAAGACCAGTCCATCTGGCCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CAA 90 bp CAGAGGCTCCGGGCCTGGCATAGTGGTTGTCTGGAGTTGGAACCAGGTAGCAAGGGTCGGCTCCTGCATTaGCTGGGCCCCCAGAACATT +
Preference number: 5 (lower is better)
Translates to: QRLRAWHSGCLELEPGSKGRLLH*LGPQNI
Trigger: AATGTTCTGGGGGCCCAGCAAATGCAGGAGCCGACC...CTTGCTACCTGGTTCCAACTCCAGACAACCACTATGCCAGGCCCGGAGCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS GCA 90 bp GGGGGCTGTCCACCTTGGCCCCAGACTCCTCTTCATCATCATCCATaGTGGGCCAGATGGACTGGTCTTCCACTCTCTTCAGCCGCTCAT +
Preference number: 5 (lower is better)
Translates to: GGCPPWPQTPLHHHP*WARWTGLPLSSAAH
Trigger: ATGAGCGGCTGAAGAGAGTGGAAGACCAGTCCATCTGGCCCAGCATGGATGATGATGAAGAGGAGTCTGGGGCCAAGGTGGACAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CAA 90 bp CCTGCATTTGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGCCTGGCAGGGCACGTaGCATCTTCCTGGCGGCTGT +
Preference number: 5 (lower is better)
Translates to: PAFAGPPEHFWQILALAQAWQGT*HLPGGC
Trigger: ACAGCCGCCAGGAAGATGCAACGTGCCCTGCCAGGC...CTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCAAATGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CAA 90 bp TGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGGCTCTCGCCTGCAGCCACTTGCTaGGGGCTGCCAGCTGATGTA +
Preference number: 5 (lower is better)
Translates to: CWAPRTFLANPCLGSGLSPAATC*GLPADV
Trigger: TACATCAGCTGGCAGCCCCAAGCAAGTGGCTGCAGG...CGAGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 90 bp GCCCCAGACTCCTCTTCATCATCATCCATGCTGGGCCAGATGGACTaGTCTTCCACTCTCTTCAGCCGCTCATTGAGTGCCTTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: APDSSSSSSMLGQMD*SSTLFSRSLSAFRA
Trigger: GGCCCTGAAGGCACTCAATGAGCGGCTGAAGAGAGTGGAAGACCAGTCCATCTGGCCCAGCATGGATGATGATGAAGAGGAGTCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CAA 90 bp TTTGCTGGGCCCCCAGAACATTTTTGGCAAATCCTTGCCTTGGCTCAGGGCTCTACTGCGAGCCTGGGCTaGGCTGCCCACTCAAGTGGT +
Preference number: 5 (lower is better)
Translates to: FAGPPEHFWQILALAQGSTASLG*AAHSSG
Trigger: ACCACTTGAGTGGGCAGCCAAGCCCAGGCTCGCAGT...AGAGCCCTGAGCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGCCCAGCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CAA 90 bp GCTGGAGCTGTTCTGGTCCAGAAGCAGTCACCGCCACAGCAGAGGGAAACAAATACAGTCCCCCATGGTTaGCTTGAGTGCCACCAGGAC +
Preference number: 5 (lower is better)
Translates to: AGAVLVQKQSPPQQRETNTVPHG*LECHQD
Trigger: GTCCTGGTGGCACTCAAGCAAACCATGGGGGACTGT...ATTTGTTTCCCTCTGCTGTGGCGGTGACTGCTTCTGGACCAGAACAGCTCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CAA 90 bp GCGAGCCTGGGCTTGGCTGCCCACTCAAGTGGTCCTGTAGAAAATACCTGGGAGGCCCCCAGAACATTTTaGGCAAATCCTTGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: ASLGLAAHSSGPVENTWEAPRTF*ANPCLG
Trigger: GCCAAGGCAAGGATTTGCCAAAAATGTTCTGGGGGC...CTCCCAGGTATTTTCTACAGGACCACTTGAGTGGGCAGCCAAGCCCAGGCTCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS GCA 90 bp CGCTTCACCGTCTTCTGGCATATCTTTACCTTCACCAGGAGGCTGTaGACCAAGTTCGCCAGCAAACCCACCACAGGCTGCAGGATCTCA +
Preference number: 5 (lower is better)
Translates to: RFTVFWHIFTFTRRL*TKFASKPTTGCRIS
Trigger: TGAGATCCTGCAGCCTGTGGTGGGTTTGCTGGCGAACTTGGTGCACAGCCTCCTGGTGAAGGTAAAGATATGCCAGAAGACGGTGAAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CAA 90 bp TTTATTGATACTGCGAGCCTGGGCTTGGCTGCCCACTCAAGTGGTCCTGTAGAACTCTTCAGCCGCTCATaGAGTGCCTTCAGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: FIDTASLGLAAHSSGPVELFSRS*SAFRAS
Trigger: ACTGGCCCTGAAGGCACTCAATGAGCGGCTGAAGAG...TTCTACAGGACCACTTGAGTGGGCAGCCAAGCCCAGGCTCGCAGTATCAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS-3UTR CAA 90 bp TCAAGTGGTCCTGTAGAAAATACCTGGGAGCTGGAGCTGTTCTGGTCCAGAAGCCAGAGAACTGCTTTATaGATACTGCGAGCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: SSGPVENTWELELFWSRSQRTAL*ILRAWA
Trigger: AGCCCAGGCTCGCAGTATCAATAAAGCAGTTCTCTG...GCTTCTGGACCAGAACAGCTCCAGCTCCCAGGTATTTTCTACAGGACCACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS TCA 72 bp TTGCCGGGCCGCAGCGTAGGCCCCTCGCCCGGGACCTaGGGGAAGGCCCTGGACGGCTGCGGCACGCCCGCC +
Preference number: 6 (lower is better)
Translates to: LPGRSVGPSPGT*GKALDGCGTPA
Trigger: GGCGGGCGTGCCGCAGCCGTCCAGGGCCTTCCCTCAGGTCCCGGGCGAGGGGCCTACGCTGCGGCCCGGCAA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 72 bp CCGCCGCACACAGAGCCTTCACCACCACGCTGGCGCTaGCCAGAATGGCCCCCAAGTGCTGGCGGGCGCCTG +
Preference number: 6 (lower is better)
Translates to: PPHTEPSPPRWR*PEWPPSAGGRL
Trigger: CAGGCGCCCGCCAGCACTTGGGGGCCATTCTGGCCAGCGCCAGCGTGGTGGTGAAGGCTCTGTGTGCGGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 72 bp GCTGGCCAGAATGGCCCCCAAGTGCTGGCGGGCGCCTaGCAGGGCACGTTGCATCTTCCTGGCGGCTGTCGG +
Preference number: 6 (lower is better)
Translates to: AGQNGPQVLAGA*QGTLHLPGGCR
Trigger: CCGACAGCCGCCAGGAAGATGCAACGTGCCCTGCCAGGCGCCCGCCAGCACTTGGGGGCCATTCTGGCCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CAA 90 bp ACGCCCGCCTACCCACCCTGTAGGCCCCGTGCCAGGCTAGCCTGGTaGGCGTTGACCTCAGGGCTGGGCCTCCTCCATCCACTGCGAGGC +
Preference number: 6 (lower is better)
Translates to: TPAYPPCRPRARLAW*ALTSGLGLLHPLRG
Trigger: GCCTCGCAGTGGATGGAGGAGGCCCAGCCCTGAGGTCAACGCCAACCAGGCTAGCCTGGCACGGGGCCTACAGGGTGGGTAGGCGGGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CAA 90 bp GCCTACCCACCCTGTAGGCCCCGTGCCAGGCTAGCCTGGTTGGCGTaGACCTCAGGGCTGGGCCTCCTCCATCCACTGCGAGGCCCTTCG +
Preference number: 6 (lower is better)
Translates to: AYPPCRPRARLAWLA*TSGLGLLHPLRGPS
Trigger: CGAAGGGCCTCGCAGTGGATGGAGGAGGCCCAGCCCTGAGGTCAACGCCAACCAGGCTAGCCTGGCACGGGGCCTACAGGGTGGGTAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 72 bp CCTGGTAAAGGATCCGCTTCCGATCGGGTGGGGCTCTaGTCCCGAGGGGCCGAGTCGGGCCTTGTTGCCGGG +
Preference number: 6 (lower is better)
Translates to: PGKGSASDRVGL*SRGAESGLVAG
Trigger: CCCGGCAACAAGGCCCGACTCGGCCCCTCGGGACCAGAGCCCCACCCGATCGGAAGCGGATCCTTTACCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CAA 72 bp GGCCCCCAAGTGCTGGCGGGCGCCTGGCAGGGCACGTaGCATCTTCCTGGCGGCTGTCGGCCTGAGAAAAGG +
Preference number: 6 (lower is better)
Translates to: GPQVLAGAWQGT*HLPGGCRPEKR
Trigger: CCTTTTCTCAGGCCGACAGCCGCCAGGAAGATGCAACGTGCCCTGCCAGGCGCCCGCCAGCACTTGGGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 72 bp GCCTACCCACCCTGTAGGCCCCGTGCCAGGCTAGCCTaGTTGGCGTTGACCTCAGGGCTGGGCCTCCTCCAT +
Preference number: 6 (lower is better)
Translates to: AYPPCRPRARLA*LALTSGLGLLH
Trigger: ATGGAGGAGGCCCAGCCCTGAGGTCAACGCCAACCAGGCTAGCCTGGCACGGGGCCTACAGGGTGGGTAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 72 bp CCTATGGCCCTGGTAAAGGATCCGCTTCCGATCGGGTaGGGCTCTGGTCCCGAGGGGCCGAGTCGGGCCTTG +
Preference number: 6 (lower is better)
Translates to: PMALVKDPLPIG*GSGPEGPSRAL
Trigger: CAAGGCCCGACTCGGCCCCTCGGGACCAGAGCCCCACCCGATCGGAAGCGGATCCTTTACCAGGGCCATAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 72 bp CGGCCCCGATGGGAGGCCCAGGCCCGGCCTAGTCACTaGCCTATGGCCCTGGTAAAGGATCCGCTTCCGATC +
Preference number: 6 (lower is better)
Translates to: RPRWEAQARPSH*PMALVKDPLPI
Trigger: GATCGGAAGCGGATCCTTTACCAGGGCCATAGGCCAGTGACTAGGCCGGGCCTGGGCCTCCCATCGGGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CAA 72 bp CCCTGTAGGCCCCGTGCCAGGCTAGCCTGGTTGGCGTaGACCTCAGGGCTGGGCCTCCTCCATCCACTGCGA +
Preference number: 6 (lower is better)
Translates to: PCRPRARLAWLA*TSGLGLLHPLR
Trigger: TCGCAGTGGATGGAGGAGGCCCAGCCCTGAGGTCAACGCCAACCAGGCTAGCCTGGCACGGGGCCTACAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 72 bp GTACCCGAGTCAAGCCTGGTCAGCTCCCGCTCGGCCTaGCTCCTGGCTTCGACCGTACCTCTTCTCTCGGGG +
Preference number: 6 (lower is better)
Translates to: VPESSLVSSRSA*LLASTVPLLSG
Trigger: CCCCGAGAGAAGAGGTACGGTCGAAGCCAGGAGCCAGGCCGAGCGGGAGCTGACCAGGCTTGACTCGGGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 72 bp GGGGACTGGTGCCTCGTTCTGTACCCGAGTCAAGCCTaGTCAGCTCCCGCTCGGCCTGGCTCCTGGCTTCGA +
Preference number: 6 (lower is better)
Translates to: GDWCLVLYPSQA*SAPARPGSWLR
Trigger: TCGAAGCCAGGAGCCAGGCCGAGCGGGAGCTGACCAGGCTTGACTCGGGTACAGAACGAGGCACCAGTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 72 bp ATAGTACCGCCGCACACAGAGCCTTCACCACCACGCTaGCGCTGGCCAGAATGGCCCCCAAGTGCTGGCGGG +
Preference number: 6 (lower is better)
Translates to: IVPPHTEPSPPR*RWPEWPPSAGG
Trigger: CCCGCCAGCACTTGGGGGCCATTCTGGCCAGCGCCAGCGTGGTGGTGAAGGCTCTGTGTGCGGCGGTACTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CAA 72 bp TACCCACCCTGTAGGCCCCGTGCCAGGCTAGCCTGGTaGGCGTTGACCTCAGGGCTGGGCCTCCTCCATCCA +
Preference number: 6 (lower is better)
Translates to: YPPCRPRARLAW*ALTSGLGLLHP
Trigger: TGGATGGAGGAGGCCCAGCCCTGAGGTCAACGCCAACCAGGCTAGCCTGGCACGGGGCCTACAGGGTGGGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS TCA 72 bp CCAGCAAACGCCCGGCCACCACCACCGTTGTCAGGCTaGTGGCCACGTCCCACACATGCTGCTCCATCAGCC +
Preference number: 6 (lower is better)
Translates to: PANARPPPPLSG*WPRPTHAAPSA
Trigger: GGCTGATGGAGCAGCATGTGTGGGACGTGGCCATCAGCCTGACAACGGTGGTGGTGGCCGGGCGTTTGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 72 bp GCCAGCAGCAGCATGGGCATCACACTGACGCGCACCTaGGGCACTCGCAGGACCACACAGTCCCCCATGGTT +
Preference number: 6 (lower is better)
Translates to: ASSSMGITLTRT*GTRRTTQSPMV
Trigger: AACCATGGGGGACTGTGTGGTCCTGCGAGTGCCCCAGGTGCGCGTCAGTGTGATGCCCATGCTGCTGCTGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 72 bp GGGCTTGGGAGGGGAGGTGCCACACTCAAGGTGGTCTaGAGTTACAGCGTCGGGGGAGCTGCCTCGAAGGTG +
Preference number: 6 (lower is better)
Translates to: GLGRGGATLKVV*SYSVGGAASKV
Trigger: CACCTTCGAGGCAGCTCCCCCGACGCTGTAACTCCAGACCACCTTGAGTGTGGCACCTCCCCTCCCAAGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS GCA 72 bp TGGGGCACTCGCAGGACCACACAGTCCCCCATGGTTTaGTTGAGTGCCACCAGGACGCCACCTAGGAAGCCC +
Preference number: 6 (lower is better)
Translates to: WGTRRTTQSPMV*LSATRTPPRKP
Trigger: GGGCTTCCTAGGTGGCGTCCTGGTGGCACTCAAGCAAACCATGGGGGACTGTGTGGTCCTGCGAGTGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS TCA 72 bp AGATCCAGAAGTTGGGAGGAAAGAGGTAGCCCGGGGTaGCCGCCAGGCAGCCTGTGTCCACGGCGAAGGAGA +
Preference number: 6 (lower is better)
Translates to: RSRSWEERGSPG*PPGSLCPRRRR
Trigger: TCTCCTTCGCCGTGGACACAGGCTGCCTGGCGGTCACCCCGGGCTACCTCTTTCCTCCCAACTTCTGGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS GCA 72 bp TCCACTGCGAGGCCCTTCGGTTCGCAAGGGGACTGGTaGCTCGTTCTGTACCCGAGTCAAGCCTGGTCAGCT +
Preference number: 6 (lower is better)
Translates to: STARPFGSQGDW*LVLYPSQAWSA
Trigger: AGCTGACCAGGCTTGACTCGGGTACAGAACGAGGCACCAGTCCCCTTGCGAACCGAAGGGCCTCGCAGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS GCA 72 bp ACCGTTGTCAGGCTGATGGCCACGTCCCACACATGCTaGTCCATCAGCCCATGGGTGGCCAGGGTCCAGATC +
Preference number: 6 (lower is better)
Translates to: TVVRLMATSHTC*SISPWVARVQI
Trigger: GATCTGGACCCTGGCCACCCATGGGCTGATGGAGCAGCATGTGTGGGACGTGGCCATCAGCCTGACAACGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 72 bp CCATCCACTGCGAGGCCCTTCGGTTCGCAAGGGGACTaGTGCCTCGTTCTGTACCCGAGTCAAGCCTGGTCA +
Preference number: 6 (lower is better)
Translates to: PSTARPFGSQGD*CLVLYPSQAWS
Trigger: TGACCAGGCTTGACTCGGGTACAGAACGAGGCACCAGTCCCCTTGCGAACCGAAGGGCCTCGCAGTGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CAA 72 bp TGCCTTCAGGGCCAGTTGCCTTCTCCGCTCGGCGTCTaGAGGGTCTGTGCCTGGCAGGCTGATGGTGATGGA +
Preference number: 6 (lower is better)
Translates to: CLQGQLPSPLGV*RVCAWQADGDG
Trigger: TCCATCACCATCAGCCTGCCAGGCACAGACCCTCAAGACGCCGAGCGGAGAAGGCAACTGGCCCTGAAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 72 bp ATGGCCACGTCCCACACATGCTGCTCCATCAGCCCATaGGTGGCCAGGGTCCAGATCCAGAAGTTGGGAGGA +
Preference number: 6 (lower is better)
Translates to: MATSHTCCSISP*VARVQIQKLGG
Trigger: TCCTCCCAACTTCTGGATCTGGACCCTGGCCACCCATGGGCTGATGGAGCAGCATGTGTGGGACGTGGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 72 bp GGCTATGGCGCTGGTAGAAGCGAAGATATACCCAACTaGAGAGCAGCCCGAAGCCATAGGAAGCCAGCGCCG +
Preference number: 6 (lower is better)
Translates to: GYGAGRSEDIPN*RAARSHRKPAP
Trigger: CGGCGCTGGCTTCCTATGGCTTCGGGCTGCTCTCCAGTTGGGTATATCTTCGCTTCTACCAGCGCCATAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 72 bp TGGGAGCTTTGTCTGAGGGCAGGGGGCTGTCCACCTTaGCCCCAGACTCCTCTTCATCATCATCCATGCTGG +
Preference number: 6 (lower is better)
Translates to: WELCLRAGGCPP*PQTPLHHHPCW
Trigger: CCAGCATGGATGATGATGAAGAGGAGTCTGGGGCCAAGGTGGACAGCCCCCTGCCCTCAGACAAAGCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS TCA 72 bp AGATGGACTGGTCTTCCACTCTCTTCAGCCGCTCATTaGGTGCCTTCAGGGCCAGTTGCCTTCTCCGCTCGG +
Preference number: 6 (lower is better)
Translates to: RWTGLPLSSAAH*VPSGPVAFSAR
Trigger: CCGAGCGGAGAAGGCAACTGGCCCTGAAGGCACTCAATGAGCGGCTGAAGAGAGTGGAAGACCAGTCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CAA 72 bp CAGATGGACTGGTCTTCCACTCTCTTCAGCCGCTCATaGAGTGCCTTCAGGGCCAGTTGCCTTCTCCGCTCG +
Preference number: 6 (lower is better)
Translates to: QMDWSSTLFSRS*SAFRASCLLRS
Trigger: CGAGCGGAGAAGGCAACTGGCCCTGAAGGCACTCAATGAGCGGCTGAAGAGAGTGGAAGACCAGTCCATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 72 bp CCTTGGCCCCAGACTCCTCTTCATCATCATCCATGCTaGGCCAGATGGACTGGTCTTCCACTCTCTTCAGCC +
Preference number: 6 (lower is better)
Translates to: PWPQTPLHHHPC*ARWTGLPLSSA
Trigger: GGCTGAAGAGAGTGGAAGACCAGTCCATCTGGCCCAGCATGGATGATGATGAAGAGGAGTCTGGGGCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266025.4
CDS CCA 72 bp TCCTCTTCATCATCATCCATGCTGGGCCAGATGGACTaGTCTTCCACTCTCTTCAGCCGCTCATTGAGTGCC +
Preference number: 6 (lower is better)
Translates to: SSSSSSMLGQMD*SSTLFSRSLSA
Trigger: GGCACTCAATGAGCGGCTGAAGAGAGTGGAAGACCAGTCCATCTGGCCCAGCATGGATGATGATGAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266025.4